Citrus Sinensis ID: 025467

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250--
Protein Sequence
MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRDHLRR
Secondary Structure (PSIPRED)
cccccccccccccccccccEEcccccccccccccccccccccccccccccccccEEEEEccccccccccEEEEEccccccccEEEEEccccccHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHccccHHHHHHHccccccccccccccccccccccHHHHHHccccccccccccccccccccccccccccccccccHHHHHHcccccHHHHHHHHHHHHccccccccccHHHHHcccccccccccc
Secondary Structure Prediction (SSPRO)
cHHHHHHccEEcccccHHHEEEEcccEEEEccccccccccccccccccccccccEEEccHHHcEEccEccccccccHHHccHHHHHccccccHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHccccccccccccHHHHHHccccccccccccccccccEcccccccccccccccccccHHHHHcccccHHHHHHHHHHccccccccccHHHHHccHHHHHHcccc
Coil and Loop (DISEMBL)
MFAVMHDLCmihtdlkpenvLLVSseyikvpdyksslhtpkdssyfkrmpkssaikvidfgsttyerpdqnyivstrhyrapevilglgwtypcdiwsvGCILVELCTGEALFQTHENLEHLAMMERVlgplpqhmLKRVDRHAEKYVRrgrldwpegaasreSIKSvmklprlqvpffygsfvefkgyclafRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGllrydptdrltarealrhpfftrdhlrr
Flexible Loop (DISEMBL)
MFAVMHDLCMIHTDLKPENVLLVSSEYikvpdyksslhtpkdssyfkrmpkssaikvidfgsttyerpdqnyivstrhYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYvrrgrldwpegaasresiksvmklprLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTArealrhpfftrdhlrr
Low Complexity Region (SEG)
MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRDHLRR
Disordered region (IsUnstruct)
**AVMHDLCMIHTDLKPENVLLVSSEYIKVPDY********************AIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPE*******IKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFF*******
Disordered Region (DISOPRED)
MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKS*************MPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPE***********************************FRCT*************HVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRD****
Disordered Region (DISEMBL)
MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRDHLRR
Disordered Region (DISPRO)
MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLH*PKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRDHL**
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRDHLRR
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	252	2.2.26 [Sep-21-2011]
P51567	427	Serine/threonine-protein	no	no	0.849	0.501	0.710	6e-98
P51566	467	Serine/threonine-protein	no	no	0.857	0.462	0.699	7e-95
P51568	400	Serine/threonine-protein	no	no	0.837	0.527	0.561	9e-73
Q10156	690	Dual specificity protein	yes	no	0.813	0.297	0.423	2e-47
P49760	499	Dual specificity protein	yes	no	0.797	0.402	0.423	1e-46
O35491	499	Dual specificity protein	yes	no	0.793	0.400	0.425	2e-46
P49759	484	Dual specificity protein	no	no	0.789	0.411	0.414	2e-44
Q9HAZ1	481	Dual specificity protein	no	no	0.789	0.413	0.414	3e-44
P49762	832	Serine/threonine-protein	no	no	0.805	0.243	0.390	7e-43
O35493	481	Dual specificity protein	no	no	0.789	0.413	0.406	1e-42

>sp|P51567|AFC2_ARATH Serine/threonine-protein kinase AFC2 OS=Arabidopsis thaliana GN=AFC2 PE=1 SV=1

 Score =  357 bits (915), Expect = 6e-98,   Method: Compositional matrix adjust.
 Identities = 174/245 (71%), Positives = 199/245 (81%), Gaps = 31/245 (12%)

Query: 3   AVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGS 62
           A MHDL MIHTDLKPEN+LLVSS+Y+K+P+YK S    +D  Y KR+PKSSAIKVIDFGS
Sbjct: 212 AFMHDLRMIHTDLKPENILLVSSDYVKIPEYKGS-RLQRDVCY-KRVPKSSAIKVIDFGS 269

Query: 63  TTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHL 122
           TTYER DQ YIVSTRHYRAPEVILGLGW+YPCD+WSVGCI+VELCTGEALFQTHENLEHL
Sbjct: 270 TTYERQDQTYIVSTRHYRAPEVILGLGWSYPCDVWSVGCIIVELCTGEALFQTHENLEHL 329

Query: 123 AMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVPFFYGS 182
           AMMERVLGP PQ MLK+VDRH+EKYVRRGRLDWP+GA SR+S+K+V+KLPRL        
Sbjct: 330 AMMERVLGPFPQQMLKKVDRHSEKYVRRGRLDWPDGATSRDSLKAVLKLPRL-------- 381

Query: 183 FVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRH 242
                                QNLIMQHVDHSAG+L +++QGLLR+DP++R+TAREALRH
Sbjct: 382 ---------------------QNLIMQHVDHSAGELINMVQGLLRFDPSERITAREALRH 420

Query: 243 PFFTR 247
           PFF R
Sbjct: 421 PFFAR 425

Arabidopsis thaliana (taxid: 3702)
EC: 2EC: .EC: 7EC: .EC: 1EC: 2EC: .EC: 1

>sp|P51566|AFC1_ARATH Serine/threonine-protein kinase AFC1 OS=Arabidopsis thaliana GN=AFC1 PE=2 SV=2

 Score =  347 bits (889), Expect = 7e-95,   Method: Compositional matrix adjust.
 Identities = 172/246 (69%), Positives = 189/246 (76%), Gaps = 30/246 (12%)

Query: 3   AVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGS 62
           A MHDL +IHTDLKPEN+LLVSSEYIK+PDYK      KD SYFK +PKSSAIK+IDFGS
Sbjct: 229 AYMHDLRLIHTDLKPENILLVSSEYIKIPDYKFLSRPTKDGSYFKNLPKSSAIKLIDFGS 288

Query: 63  TTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHL 122
           TT+E  D NYIVSTRHYRAPEVILG+GW YPCD+WS+GCILVELC+GEALFQTHENLEHL
Sbjct: 289 TTFEHQDHNYIVSTRHYRAPEVILGVGWNYPCDLWSIGCILVELCSGEALFQTHENLEHL 348

Query: 123 AMMERVLGPLPQHMLKRVDRHAEKYVRRG-RLDWPEGAASRESIKSVMKLPRLQVPFFYG 181
           AMMERVLGPLP HM+ R DR +EKY RRG +LDWPEGA SR+S+K+V KLPRL       
Sbjct: 349 AMMERVLGPLPPHMVLRADRRSEKYFRRGAKLDWPEGATSRDSLKAVWKLPRL------- 401

Query: 182 SFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALR 241
                                  NLIMQHVDHSAGDL  LLQGLLRYDPT+R  AREAL 
Sbjct: 402 ----------------------PNLIMQHVDHSAGDLIDLLQGLLRYDPTERFKAREALN 439

Query: 242 HPFFTR 247
           HPFFTR
Sbjct: 440 HPFFTR 445

Activator of yeast transcription factor, STE12.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 2

EC: .

EC: 1

>sp|P51568|AFC3_ARATH Serine/threonine-protein kinase AFC3 OS=Arabidopsis thaliana GN=AFC3 PE=2 SV=2

 Score =  273 bits (698), Expect = 9e-73,   Method: Compositional matrix adjust.
 Identities = 137/244 (56%), Positives = 172/244 (70%), Gaps = 33/244 (13%)

Query: 3   AVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGS 62
           A MH+L ++HTDLKPEN+LLVSSE +K+PD K S     + ++F+ +PKSSAIK+IDFGS
Sbjct: 185 AYMHELQLVHTDLKPENILLVSSENVKLPDNKRS---AANETHFRCLPKSSAIKLIDFGS 241

Query: 63  TTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHL 122
           T  +    + IV TRHYR+PEVILGLGW+Y CD+WS+GCIL ELCTGEALFQTH+NLEHL
Sbjct: 242 TVCDNRIHHSIVQTRHYRSPEVILGLGWSYQCDLWSIGCILFELCTGEALFQTHDNLEHL 301

Query: 123 AMMERVLGPLPQHMLKRVDRHAEKYVRRG-RLDWPEGAASRESIKSVMKLPRLQVPFFYG 181
           AMMER LGPLP+HM ++  R AEKY RRG RL+WPEGA SRESI++V +L RL       
Sbjct: 302 AMMERALGPLPEHMTRKASRGAEKYFRRGCRLNWPEGANSRESIRAVKRLDRL------- 354

Query: 182 SFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALR 241
                                 ++++ +HVD++      LL GLL YDP++RLTA EAL 
Sbjct: 355 ----------------------KDMVSKHVDNTRSRFADLLYGLLAYDPSERLTANEALD 392

Query: 242 HPFF 245
           HPFF
Sbjct: 393 HPFF 396

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 2

EC: .

EC: 1

>sp|Q10156|LKH1_SCHPO Dual specificity protein kinase lkh1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=lkh1 PE=1 SV=3

 Score =  189 bits (480), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 105/248 (42%), Positives = 148/248 (59%), Gaps = 43/248 (17%)

Query: 3   AVMHDLCMIHTDLKPENVLLVS--SEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDF 60
           A +H L ++HTDLKPENVLLVS  S  I++P Y++         Y +++  S  I++IDF
Sbjct: 477 AFLHSLGLVHTDLKPENVLLVSNASRTIRLP-YRN---------YSQKVLNSCEIRLIDF 526

Query: 61  GSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLE 120
           GS T+E    + +VSTRHYRAPE+ILGLGW+YPCD+WS+GCILVEL TG+ALFQTHE+ E
Sbjct: 527 GSATFEDEYHSSVVSTRHYRAPEIILGLGWSYPCDVWSIGCILVELFTGQALFQTHEDSE 586

Query: 121 HLAMMERVLGPLPQHMLKRVDRHAEKYVRR-GRLDWPEGAASRESIKSVMKLPRLQVPFF 179
           HL MME++LGP  ++M+ R  R ++++ +  G++ +P     ++SI  +  L  L+  F 
Sbjct: 587 HLCMMEKILGPFDRNMISRSSRTSQRFFKSDGKVRYPLSNTPKKSINYLQSLQTLEQIFA 646

Query: 180 YGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREA 239
             S                                   L  LL+ +  YDP  R+TA+EA
Sbjct: 647 VSS------------------------------PEVALLLDLLKKVFVYDPKRRITAKEA 676

Query: 240 LRHPFFTR 247
           L HPFFT+
Sbjct: 677 LWHPFFTQ 684

Protein kinase that may act as a negative regulator of filamentous growth and flocculation. Appears to have a role in normal cell wall and septum formation and in cell seperation. May have antagonistic function in the regulation of beta-glucan distribution between the sites for cell wall and septum assembly.

Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 2

EC: .

EC: 1

>sp|P49760|CLK2_HUMAN Dual specificity protein kinase CLK2 OS=Homo sapiens GN=CLK2 PE=1 SV=1

 Score =  186 bits (472), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 103/243 (42%), Positives = 143/243 (58%), Gaps = 42/243 (17%)

Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           +HD  + HTDLKPEN+L V+S+Y    +   +L   +D    +R  KS+A++V+DFGS T
Sbjct: 281 LHDNKLTHTDLKPENILFVNSDY----ELTYNLEKKRD----ERSVKSTAVRVVDFGSAT 332

Query: 65  YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAM 124
           ++    + IVSTRHYRAPEVIL LGW+ PCD+WS+GCI+ E   G  LFQTH+N EHLAM
Sbjct: 333 FDHEHHSTIVSTRHYRAPEVILELGWSQPCDVWSIGCIIFEYYVGFTLFQTHDNREHLAM 392

Query: 125 MERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVPFFYGSFV 184
           MER+LGP+P  M+++  +  +KY  RGRLDW E  ++                   G +V
Sbjct: 393 MERILGPIPSRMIRKTRK--QKYFYRGRLDWDENTSA-------------------GRYV 431

Query: 185 EFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPF 244
             +  C   R         + L  +  +H    L  L++ +L Y+P  RLT  EAL+HPF
Sbjct: 432 --RENCKPLR---------RYLTSEAEEHHQ--LFDLIESMLEYEPAKRLTLGEALQHPF 478

Query: 245 FTR 247
           F R
Sbjct: 479 FAR 481

Dual specificity kinase acting on both serine/threonine and tyrosine-containing substrates. Phosphorylates serine- and arginine-rich (SR) proteins of the spliceosomal complex. May be a constituent of a network of regulatory mechanisms that enable SR proteins to control RNA splicing and can cause redistribution of SR proteins from speckles to a diffuse nucleoplasmic distribution. Acts as a suppressor of hepatic gluconeogenesis and glucose output by repressing PPARGC1A transcriptional activity on gluconeogenic genes via its phosphorylation. Phosphorylates PPP2R5B thereby stimulating the assembly of PP2A phosphatase with the PPP2R5B-AKT1 complex leading to dephosphorylation of AKT1. Phosphorylates: PTPN1, SRSF1 and SRSF3. Regulates the alternative splicing of tissue factor (F3) pre-mRNA in endothelial cells.

Homo sapiens (taxid: 9606)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 2

EC: .

EC: 1

>sp|O35491|CLK2_MOUSE Dual specificity protein kinase CLK2 OS=Mus musculus GN=Clk2 PE=1 SV=2

 Score =  186 bits (471), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 103/242 (42%), Positives = 142/242 (58%), Gaps = 42/242 (17%)

Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           +HD  + HTDLKPEN+L V+S+Y    +   +L   +D    +R  KS+A++V+DFGS T
Sbjct: 280 LHDNKLTHTDLKPENILFVNSDY----ELTYNLEKKRD----ERSVKSTAVRVVDFGSAT 331

Query: 65  YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAM 124
           ++    + IVSTRHYRAPEVIL LGW+ PCD+WS+GCI+ E   G  LFQTH+N EHLAM
Sbjct: 332 FDHEHHSTIVSTRHYRAPEVILELGWSQPCDVWSIGCIIFEYYVGFTLFQTHDNREHLAM 391

Query: 125 MERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVPFFYGSFV 184
           MER+LGP+P  M+++  +  +KY  RGRLDW E  ++                   G +V
Sbjct: 392 MERILGPVPSRMIRKTRK--QKYFYRGRLDWDENTSA-------------------GRYV 430

Query: 185 EFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPF 244
             +  C   R         + L  +  DH    L  L++ +L Y+P  RLT  EAL+HPF
Sbjct: 431 --RENCKPLR---------RYLTSEAEDHHQ--LFDLIENMLEYEPAKRLTLGEALQHPF 477

Query: 245 FT 246
           F 
Sbjct: 478 FA 479

Dual specificity kinase acting on both serine/threonine and tyrosine-containing substrates. Phosphorylates serine- and arginine-rich (SR) proteins of the spliceosomal complex. May be a constituent of a network of regulatory mechanisms that enable SR proteins to control RNA splicing and can cause redistribution of SR proteins from speckles to a diffuse nucleoplasmic distribution. Acts as a suppressor of hepatic gluconeogenesis and glucose output by repressing PPARGC1A transcriptional activity on gluconeogenic genes via its phosphorylation. Phosphorylates PPP2R5B thereby stimulating the assembly of PP2A phosphatase with the PPP2R5B-AKT1 complex leading to dephosphorylation of AKT1. Phosphorylates: PTPN1, SRSF1 and SRSF3. Regulates the alternative splicing of tissue factor (F3) pre-mRNA in endothelial cells.

Mus musculus (taxid: 10090)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 2

EC: .

EC: 1

>sp|P49759|CLK1_HUMAN Dual specificity protein kinase CLK1 OS=Homo sapiens GN=CLK1 PE=1 SV=2

 Score =  179 bits (453), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 100/241 (41%), Positives = 139/241 (57%), Gaps = 42/241 (17%)

Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           +H   + HTDLKPEN+L V S+Y +  + K      +D    +R   +  IKV+DFGS T
Sbjct: 279 LHSNKLTHTDLKPENILFVQSDYTEAYNPK----IKRD----ERTLINPDIKVVDFGSAT 330

Query: 65  YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAM 124
           Y+    + +VSTRHYRAPEVIL LGW+ PCD+WS+GCIL+E   G  +F TH++ EHLAM
Sbjct: 331 YDDEHHSTLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTHDSKEHLAM 390

Query: 125 MERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVPFFYGSFV 184
           MER+LGPLP+HM+++  +   KY    RLDW E +++                       
Sbjct: 391 MERILGPLPKHMIQKTRK--RKYFHHDRLDWDEHSSA----------------------- 425

Query: 185 EFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPF 244
              G  ++ RC        + ++ Q V+H    L  L+Q +L YDP  R+T REAL+HPF
Sbjct: 426 ---GRYVSRRC----KPLKEFMLSQDVEHER--LFDLIQKMLEYDPAKRITLREALKHPF 476

Query: 245 F 245
           F
Sbjct: 477 F 477

Dual specificity kinase acting on both serine/threonine and tyrosine-containing substrates. Phosphorylates serine- and arginine-rich (SR) proteins of the spliceosomal complex and may be a constituent of a network of regulatory mechanisms that enable SR proteins to control RNA splicing. Phosphorylates: SRSF1, SRSF3 and PTPN1. Regulates the alternative splicing of tissue factor (F3) pre-mRNA in endothelial cells and adenovirus E1A pre-mRNA.

Homo sapiens (taxid: 9606)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 2

EC: .

EC: 1

>sp|Q9HAZ1|CLK4_HUMAN Dual specificity protein kinase CLK4 OS=Homo sapiens GN=CLK4 PE=1 SV=1

 Score =  178 bits (452), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 100/241 (41%), Positives = 138/241 (57%), Gaps = 42/241 (17%)

Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           +H   + HTDLKPEN+L V S+Y  V  Y S +   +      R  K++ IKV+DFGS T
Sbjct: 277 LHHNKLTHTDLKPENILFVKSDY--VVKYNSKMKRDE------RTLKNTDIKVVDFGSAT 328

Query: 65  YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAM 124
           Y+    + +VSTRHYRAPEVIL LGW+ PCD+WS+GCIL+E   G  +FQTH++ EHLAM
Sbjct: 329 YDDEHHSTLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFQTHDSKEHLAM 388

Query: 125 MERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVPFFYGSFV 184
           MER+LGP+PQHM+++  +   KY    +LDW E +++                       
Sbjct: 389 MERILGPIPQHMIQKTRK--RKYFHHNQLDWDEHSSA----------------------- 423

Query: 185 EFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPF 244
              G  +  RC        +  ++ H D     L  L++ +L YDPT R+T  EAL+HPF
Sbjct: 424 ---GRYVRRRCKP-----LKEFMLCH-DEEHEKLFDLVRRMLEYDPTQRITLDEALQHPF 474

Query: 245 F 245
           F
Sbjct: 475 F 475

Dual specificity kinase acting on both serine/threonine and tyrosine-containing substrates. Phosphorylates serine- and arginine-rich (SR) proteins of the spliceosomal complex and may be a constituent of a network of regulatory mechanisms that enable SR proteins to control RNA splicing. Phosphorylates SRSF1 and SRSF3. Required for the regulation of alternative splicing of MAPT/TAU. Regulates the alternative splicing of tissue factor (F3) pre-mRNA in endothelial cells.

Homo sapiens (taxid: 9606)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 2

EC: .

EC: 1

>sp|P49762|DOA_DROME Serine/threonine-protein kinase Doa OS=Drosophila melanogaster GN=Doa PE=1 SV=2

 Score =  174 bits (440), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 96/246 (39%), Positives = 135/246 (54%), Gaps = 43/246 (17%)

Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           +HD  + HTDLKPEN+L V S+Y    ++K +           R  K++ +++IDFGS T
Sbjct: 596 LHDNRLTHTDLKPENILFVDSDYTSHYNHKINREV--------RRVKNTDVRLIDFGSAT 647

Query: 65  YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAM 124
           ++    + IVSTRHYRAPEVIL LGW+ PCD+WS+GCIL EL  G  LFQTH+N EHLAM
Sbjct: 648 FDHEHHSTIVSTRHYRAPEVILELGWSQPCDVWSIGCILFELYLGITLFQTHDNREHLAM 707

Query: 125 MERVLGPLPQHMLKR---VDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVPFFYG 181
           MER+LG +P  M +      +   KY   G+LDW E +++   ++   K      P F  
Sbjct: 708 MERILGQIPYRMARNHTLYSKTKTKYFYHGKLDWDEKSSAGRYVRDHCK------PLFLC 761

Query: 182 SFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALR 241
              + + +C                          +L  L++ +L Y+P+ R+T  EAL 
Sbjct: 762 QLSDSEDHC--------------------------ELFSLIKKMLEYEPSSRITLGEALH 795

Query: 242 HPFFTR 247
           HPFF R
Sbjct: 796 HPFFDR 801

Negative regulator of the copia retrotransposon element of the white (w) gene. In the eye, it is required for normal pigmentation, photoreceptor cell development and for organization of interommatidial bristles. Also essential for embryonic segmentation and differentiation of the nervous system. Functions in the control of alternative splicing by phosphorylating the argine/serine-rich splicing factors, SR proteins.

Drosophila melanogaster (taxid: 7227)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 2

EC: .

EC: 1

>sp|O35493|CLK4_MOUSE Dual specificity protein kinase CLK4 OS=Mus musculus GN=Clk4 PE=1 SV=1

 Score =  173 bits (439), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 98/241 (40%), Positives = 137/241 (56%), Gaps = 42/241 (17%)

Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           +H   + HTDLKPEN+L V S+Y  V  Y S +   +      R  K++ IKV+DFGS T
Sbjct: 277 LHHNKLTHTDLKPENILFVKSDY--VVKYNSKMKRDE------RTLKNTDIKVVDFGSAT 328

Query: 65  YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAM 124
           Y+    + +VSTRHYRAPEVIL LGW+ PCD+WS+GCIL+E   G  +FQTH++ EHLAM
Sbjct: 329 YDDEHHSTLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFQTHDSKEHLAM 388

Query: 125 MERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVPFFYGSFV 184
           MER+LGP+P HM+++  +   KY    +LDW E +++                   G +V
Sbjct: 389 MERILGPIPAHMIQKTRK--RKYFHHNQLDWDEHSSA-------------------GRYV 427

Query: 185 EFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPF 244
             +   L            +  ++ H D     L  L++ +L YDP  R+T  EAL+HPF
Sbjct: 428 RRRCKPL------------KEFMLCH-DEEHEKLFDLVRRMLEYDPARRITLDEALQHPF 474

Query: 245 F 245
           F
Sbjct: 475 F 475

Dual specificity kinase acting on both serine/threonine and tyrosine-containing substrates. Phosphorylates serine- and arginine-rich (SR) proteins of the spliceosomal complex and may be a constituent of a network of regulatory mechanisms that enable SR proteins to control RNA splicing. Phosphorylates SRSF1 and SRSF3. Required for the regulation of alternative splicing of MAPT/TAU. Regulates the alternative splicing of tissue factor (F3) pre-mRNA in endothelial cells.

Mus musculus (taxid: 10090)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 2

EC: .

EC: 1

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	252
255540473	435	afc, putative [Ricinus communis] gi|2235	0.880	0.510	0.788	1e-111
225456860	435	PREDICTED: serine/threonine-protein kina	0.876	0.508	0.8	1e-111
224135977	427	predicted protein [Populus trichocarpa]	0.873	0.515	0.783	1e-110
7211773	437	protein kinase MK5 [Mesembryanthemum cry	0.876	0.505	0.764	1e-107
356516617	425	PREDICTED: serine/threonine-protein kina	0.869	0.515	0.776	1e-106
356508738	425	PREDICTED: serine/threonine-protein kina	0.869	0.515	0.776	1e-105
255647343	425	unknown [Glycine max]	0.869	0.515	0.776	1e-105
224121850	422	predicted protein [Populus trichocarpa]	0.857	0.511	0.767	1e-105
357461735	426	Serine/threonine protein kinase AFC2 [Me	0.869	0.514	0.768	1e-105
217074570	327	unknown [Medicago truncatula]	0.869	0.669	0.764	1e-104

>gi|255540473|ref|XP_002511301.1| afc, putative [Ricinus communis] gi|223550416|gb|EEF51903.1| afc, putative [Ricinus communis]

 Score =  408 bits (1049), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 198/251 (78%), Positives = 211/251 (84%), Gaps = 29/251 (11%)

Query: 2   FAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG 61
            A MHDL +IHTDLKPEN+LLVS +Y+KVPDYK S  +PKDSSYFKR+PKSSA+KVIDFG
Sbjct: 214 IAFMHDLHLIHTDLKPENILLVSPDYVKVPDYKGSTRSPKDSSYFKRVPKSSAVKVIDFG 273

Query: 62  STTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEH 121
           STTYER DQNYIVSTRHYRAPEVILGLGW+YPCDIWSVGCILVELCTGEALFQTHENLEH
Sbjct: 274 STTYERQDQNYIVSTRHYRAPEVILGLGWSYPCDIWSVGCILVELCTGEALFQTHENLEH 333

Query: 122 LAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVPFFYG 181
           LAMMERVLGPLPQHMLKR+DRHAEKYVRRGRLDWPEGA SRESIK+V+KLPRL       
Sbjct: 334 LAMMERVLGPLPQHMLKRIDRHAEKYVRRGRLDWPEGATSRESIKAVLKLPRL------- 386

Query: 182 SFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALR 241
                                 QNL+MQHVDHSAGDL HLLQGLLRYDP+DRLTAREALR
Sbjct: 387 ----------------------QNLVMQHVDHSAGDLIHLLQGLLRYDPSDRLTAREALR 424

Query: 242 HPFFTRDHLRR 252
           HPFF RDHLRR
Sbjct: 425 HPFFARDHLRR 435

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225456860|ref|XP_002279764.1| PREDICTED: serine/threonine-protein kinase AFC2 [Vitis vinifera] gi|297733679|emb|CBI14926.3| unnamed protein product [Vitis vinifera]

 Score =  405 bits (1041), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 200/250 (80%), Positives = 209/250 (83%), Gaps = 29/250 (11%)

Query: 3   AVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGS 62
           A MHDL +IHTDLKPEN+LLVS EY+KVPDYK S  +PKD SYFKR+PKSSAIKVIDFGS
Sbjct: 214 AFMHDLRLIHTDLKPENILLVSPEYVKVPDYKVSSRSPKDGSYFKRVPKSSAIKVIDFGS 273

Query: 63  TTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHL 122
           TTYER DQNYIVSTRHYRAPEVILGLGW+YPCDIWSVGCILVELCTGEALFQTHENLEHL
Sbjct: 274 TTYERQDQNYIVSTRHYRAPEVILGLGWSYPCDIWSVGCILVELCTGEALFQTHENLEHL 333

Query: 123 AMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVPFFYGS 182
           AMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGA SRESIK+V+KLPRL        
Sbjct: 334 AMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGATSRESIKAVLKLPRL-------- 385

Query: 183 FVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRH 242
                                QNLIMQHVDHSAGDL HLLQGLLRYDP+DRLTA  ALRH
Sbjct: 386 ---------------------QNLIMQHVDHSAGDLIHLLQGLLRYDPSDRLTALGALRH 424

Query: 243 PFFTRDHLRR 252
           PFFTRDHLRR
Sbjct: 425 PFFTRDHLRR 434

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224135977|ref|XP_002322208.1| predicted protein [Populus trichocarpa] gi|222869204|gb|EEF06335.1| predicted protein [Populus trichocarpa]

 Score =  402 bits (1034), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 195/249 (78%), Positives = 211/249 (84%), Gaps = 29/249 (11%)

Query: 3   AVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGS 62
           A MHDL MIHTDLKPEN+LLVSS+Y+KVPDYK+S  +PKDSSY+KR+PKSSAIKVIDFGS
Sbjct: 207 AFMHDLHMIHTDLKPENILLVSSDYVKVPDYKNSTRSPKDSSYYKRVPKSSAIKVIDFGS 266

Query: 63  TTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHL 122
           TTYER DQNYIVSTRHYRAPEVILGLGW+YPCD+WSVGCILVELCTGEALFQTHENLEHL
Sbjct: 267 TTYERQDQNYIVSTRHYRAPEVILGLGWSYPCDVWSVGCILVELCTGEALFQTHENLEHL 326

Query: 123 AMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVPFFYGS 182
           AMMERVLGP+PQ+MLKRVDRHAEK+VRRGRLDWPEGAASRESIK+V+KLPRL        
Sbjct: 327 AMMERVLGPMPQNMLKRVDRHAEKFVRRGRLDWPEGAASRESIKAVLKLPRL-------- 378

Query: 183 FVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRH 242
                                QNL+MQHVDHSAGDL HLLQGLLRYDP DRLTAREALRH
Sbjct: 379 ---------------------QNLVMQHVDHSAGDLIHLLQGLLRYDPMDRLTAREALRH 417

Query: 243 PFFTRDHLR 251
           PFF +DH R
Sbjct: 418 PFFAKDHRR 426

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|7211773|gb|AAF40430.1| protein kinase MK5 [Mesembryanthemum crystallinum]

 Score =  394 bits (1011), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 191/250 (76%), Positives = 208/250 (83%), Gaps = 29/250 (11%)

Query: 3   AVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGS 62
           A MHDL +IHTDLKPENVLLVSS+Y+K+ DYK    +PKDSSY+K++PKSSAIKVIDFGS
Sbjct: 217 AFMHDLHLIHTDLKPENVLLVSSDYVKIRDYKGFSRSPKDSSYYKKVPKSSAIKVIDFGS 276

Query: 63  TTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHL 122
           TTYERPDQNYIVSTRHYRAPEVILGLGW+YPCD+WSVGCILVELC+GEALFQTHENLE L
Sbjct: 277 TTYERPDQNYIVSTRHYRAPEVILGLGWSYPCDVWSVGCILVELCSGEALFQTHENLEDL 336

Query: 123 AMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVPFFYGS 182
           AMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESI++V KL RL        
Sbjct: 337 AMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIRAVTKLLRL-------- 388

Query: 183 FVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRH 242
                                QNL+MQHVDHS GD  HLLQGLLRYDP+DRLTAREA+RH
Sbjct: 389 ---------------------QNLVMQHVDHSGGDFIHLLQGLLRYDPSDRLTAREAVRH 427

Query: 243 PFFTRDHLRR 252
           PFFTRD+LRR
Sbjct: 428 PFFTRDNLRR 437

Source: Mesembryanthemum crystallinum

Species: Mesembryanthemum crystallinum

Genus: Mesembryanthemum

Family: Aizoaceae

Order: Caryophyllales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356516617|ref|XP_003526990.1| PREDICTED: serine/threonine-protein kinase AFC2-like [Glycine max]

 Score =  389 bits (1000), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 194/250 (77%), Positives = 207/250 (82%), Gaps = 31/250 (12%)

Query: 3   AVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGS 62
           A MHDL MIHTDLKPEN+LLVS EY+K+PDYKS+  +P  SS+FKR+PKSSAIKVIDFGS
Sbjct: 207 AFMHDLHMIHTDLKPENILLVSPEYLKIPDYKSTTRSP--SSFFKRVPKSSAIKVIDFGS 264

Query: 63  TTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHL 122
           TTYER DQ YIVSTRHYRAPEVILGLGW+YPCDIWSVGCILVELCTGEALFQTHENLEHL
Sbjct: 265 TTYEREDQTYIVSTRHYRAPEVILGLGWSYPCDIWSVGCILVELCTGEALFQTHENLEHL 324

Query: 123 AMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVPFFYGS 182
           AMMERVLGP+PQ MLKRVDRHAEKYVRRGRLDWPEGAASRESIK+VMKLPRL        
Sbjct: 325 AMMERVLGPIPQQMLKRVDRHAEKYVRRGRLDWPEGAASRESIKAVMKLPRL-------- 376

Query: 183 FVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRH 242
                                QN+IMQHVDHSAGDL HLLQGLLRYDP +RLTAR+ALRH
Sbjct: 377 ---------------------QNIIMQHVDHSAGDLIHLLQGLLRYDPFERLTARDALRH 415

Query: 243 PFFTRDHLRR 252
            FFTRD LRR
Sbjct: 416 SFFTRDQLRR 425

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356508738|ref|XP_003523111.1| PREDICTED: serine/threonine-protein kinase AFC2-like isoform 1 [Glycine max]

 Score =  388 bits (997), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 194/250 (77%), Positives = 206/250 (82%), Gaps = 31/250 (12%)

Query: 3   AVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGS 62
           A MHDL MIHTDLKPEN+LLVS EY+K+PDYKS+  +P  SS+FKR+PKSSAIKVIDFGS
Sbjct: 207 AFMHDLRMIHTDLKPENILLVSPEYLKIPDYKSTTRSP--SSFFKRVPKSSAIKVIDFGS 264

Query: 63  TTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHL 122
           TTYER DQ YIVSTRHYRAPEVILGLGW+YPCDIWSVGCILVELCTGEALFQTHENLEHL
Sbjct: 265 TTYEREDQTYIVSTRHYRAPEVILGLGWSYPCDIWSVGCILVELCTGEALFQTHENLEHL 324

Query: 123 AMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVPFFYGS 182
           AMMERVLGP+PQ MLKRVDRHAEKYVRRGRLDWPEGA SRESIK+VMKLPRL        
Sbjct: 325 AMMERVLGPIPQQMLKRVDRHAEKYVRRGRLDWPEGAISRESIKAVMKLPRL-------- 376

Query: 183 FVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRH 242
                                QNLIMQHVDHSAGDL HLLQGLLRYDP +RLTAR+ALRH
Sbjct: 377 ---------------------QNLIMQHVDHSAGDLIHLLQGLLRYDPFERLTARDALRH 415

Query: 243 PFFTRDHLRR 252
            FF RDHLRR
Sbjct: 416 SFFMRDHLRR 425

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255647343|gb|ACU24138.1| unknown [Glycine max]

 Score =  388 bits (996), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 194/250 (77%), Positives = 206/250 (82%), Gaps = 31/250 (12%)

Query: 3   AVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGS 62
           A MHDL MIHTDLKPEN+LLVS EY+K+PDYKS+  +P  SS+FKR+PKSSAIKVIDFGS
Sbjct: 207 AFMHDLHMIHTDLKPENILLVSPEYLKIPDYKSTTRSP--SSFFKRVPKSSAIKVIDFGS 264

Query: 63  TTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHL 122
           TTYER DQ YIVSTRHYRAPEVILGLGW+YPCDIWSVGCILVELCTGEALFQTHENLEHL
Sbjct: 265 TTYEREDQTYIVSTRHYRAPEVILGLGWSYPCDIWSVGCILVELCTGEALFQTHENLEHL 324

Query: 123 AMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVPFFYGS 182
           AMMERVLGP+PQ MLKRVDRHAEKYVRRGRLDWPEGAASRESIK+VMKLPRL        
Sbjct: 325 AMMERVLGPIPQQMLKRVDRHAEKYVRRGRLDWPEGAASRESIKAVMKLPRL-------- 376

Query: 183 FVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRH 242
                                QN IMQHVDHSAGDL HLLQGLLRYDP +RLTAR+ALRH
Sbjct: 377 ---------------------QNTIMQHVDHSAGDLIHLLQGLLRYDPFERLTARDALRH 415

Query: 243 PFFTRDHLRR 252
            FFTRD LRR
Sbjct: 416 SFFTRDQLRR 425

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224121850|ref|XP_002318688.1| predicted protein [Populus trichocarpa] gi|222859361|gb|EEE96908.1| predicted protein [Populus trichocarpa]

 Score =  386 bits (992), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 188/245 (76%), Positives = 203/245 (82%), Gaps = 29/245 (11%)

Query: 3   AVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGS 62
           A MHDL MIHTDLKPEN+LLVSS+Y+KVPDYK+S  +PKD SY+KR+PKSSAIKVIDFGS
Sbjct: 207 AFMHDLRMIHTDLKPENILLVSSDYVKVPDYKNSSRSPKDISYYKRVPKSSAIKVIDFGS 266

Query: 63  TTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHL 122
           TTYER DQNYIVSTRHYRAPEVILGLGW+YPCDIWS GCILVELCTGEALFQTHENLEHL
Sbjct: 267 TTYERQDQNYIVSTRHYRAPEVILGLGWSYPCDIWSAGCILVELCTGEALFQTHENLEHL 326

Query: 123 AMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVPFFYGS 182
           AMMERVLGP+PQH+LKRVDRHA KYVRRGRLDWPEGAASRES+K+V+KLPRL        
Sbjct: 327 AMMERVLGPMPQHILKRVDRHAGKYVRRGRLDWPEGAASRESMKAVLKLPRL-------- 378

Query: 183 FVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRH 242
                                QNL+MQHVD SAGDL HLLQGLLRYDP DRLTAREALRH
Sbjct: 379 ---------------------QNLVMQHVDQSAGDLIHLLQGLLRYDPLDRLTAREALRH 417

Query: 243 PFFTR 247
           PF  +
Sbjct: 418 PFLAK 422

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357461735|ref|XP_003601149.1| Serine/threonine protein kinase AFC2 [Medicago truncatula] gi|355490197|gb|AES71400.1| Serine/threonine protein kinase AFC2 [Medicago truncatula]

 Score =  385 bits (989), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 192/250 (76%), Positives = 206/250 (82%), Gaps = 31/250 (12%)

Query: 3   AVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGS 62
           A MHDL MIHTDLKPEN+LLVSSEY+K+PDYKSS   P   S++KR+PKSSAIKVIDFGS
Sbjct: 208 AFMHDLHMIHTDLKPENILLVSSEYLKIPDYKSSSRAP--CSFYKRVPKSSAIKVIDFGS 265

Query: 63  TTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHL 122
           TTYER +QNYIVSTRHYRAPEVILGLGW+YPCD+WSVGCILVELCTGEALFQTHENLEHL
Sbjct: 266 TTYERENQNYIVSTRHYRAPEVILGLGWSYPCDVWSVGCILVELCTGEALFQTHENLEHL 325

Query: 123 AMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVPFFYGS 182
           AMMERVLG LPQ +LKRVDRHAEKYVRRGRLDWPEGA SRESIK+VMKLPRL        
Sbjct: 326 AMMERVLGLLPQQLLKRVDRHAEKYVRRGRLDWPEGANSRESIKAVMKLPRL-------- 377

Query: 183 FVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRH 242
                                QNLIMQHVDHSAGDL HLLQGLLRYDP +R+TAR+ALRH
Sbjct: 378 ---------------------QNLIMQHVDHSAGDLIHLLQGLLRYDPFERVTARDALRH 416

Query: 243 PFFTRDHLRR 252
           PFF RDHLRR
Sbjct: 417 PFFMRDHLRR 426

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|217074570|gb|ACJ85645.1| unknown [Medicago truncatula]

 Score =  385 bits (988), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 191/250 (76%), Positives = 205/250 (82%), Gaps = 31/250 (12%)

Query: 3   AVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGS 62
           A MHDL MIHTDLKPEN+LLVSSEY+K+PDYKSS   P   S++KR+PKSSAIKVIDFGS
Sbjct: 109 AFMHDLHMIHTDLKPENILLVSSEYLKIPDYKSSSRAP--CSFYKRVPKSSAIKVIDFGS 166

Query: 63  TTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHL 122
           TTYER +QNYIVSTRHYRAPEVILGLGW+YPCD+WSVGCILVELCTGEALFQTHENLEHL
Sbjct: 167 TTYERENQNYIVSTRHYRAPEVILGLGWSYPCDVWSVGCILVELCTGEALFQTHENLEHL 226

Query: 123 AMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVPFFYGS 182
           AMMERVLG LPQ +LKRVDRHAEKYVRRGRLDWPEGA SRESIK+VMKLPRL        
Sbjct: 227 AMMERVLGLLPQQLLKRVDRHAEKYVRRGRLDWPEGANSRESIKAVMKLPRL-------- 278

Query: 183 FVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRH 242
                                QNLIMQHVDHSAGD  HLLQGLLRYDP +R+TAR+ALRH
Sbjct: 279 ---------------------QNLIMQHVDHSAGDFIHLLQGLLRYDPFERVTARDALRH 317

Query: 243 PFFTRDHLRR 252
           PFF RDHLRR
Sbjct: 318 PFFMRDHLRR 327

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	252
TAIR|locus:2121984	427	FC2 "FUS3-complementing gene 2	0.678	0.400	0.815	2.6e-94
TAIR|locus:2084006	467	FC1 "FUS3-complementing gene 1	0.682	0.368	0.780	1.9e-91
TAIR|locus:2125622	400	AME3 [Arabidopsis thaliana (ta	0.674	0.425	0.660	1.1e-70
UNIPROTKB|E1B9Q2	500	CLK2 "Uncharacterized protein"	0.619	0.312	0.493	1.8e-48
UNIPROTKB|F1P919	612	CLK2 "Uncharacterized protein"	0.619	0.254	0.493	1.8e-48
UNIPROTKB|B1AVT0	497	CLK2 "Dual-specificity protein	0.619	0.313	0.493	1.8e-48
UNIPROTKB|P49760	499	CLK2 "Dual specificity protein	0.619	0.312	0.493	1.8e-48
UNIPROTKB|F1RLJ5	500	CLK2 "Uncharacterized protein"	0.619	0.312	0.493	1.8e-48
MGI|MGI:1098669	499	Clk2 "CDC-like kinase 2" [Mus	0.619	0.312	0.493	4.7e-48
RGD|1359711	500	Clk2 "CDC-like kinase 2" [Ratt	0.619	0.312	0.493	4.7e-48

TAIR|locus:2121984 FC2 "FUS3-complementing gene 2" [Arabidopsis thaliana (taxid:3702)]

 Score = 766 (274.7 bits), Expect = 2.6e-94, Sum P(2) = 2.6e-94
 Identities = 141/173 (81%), Positives = 158/173 (91%)

Query:     3 AVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGS 62
             A MHDL MIHTDLKPEN+LLVSS+Y+K+P+YK S    +D  Y KR+PKSSAIKVIDFGS
Sbjct:   212 AFMHDLRMIHTDLKPENILLVSSDYVKIPEYKGS-RLQRDVCY-KRVPKSSAIKVIDFGS 269

Query:    63 TTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHL 122
             TTYER DQ YIVSTRHYRAPEVILGLGW+YPCD+WSVGCI+VELCTGEALFQTHENLEHL
Sbjct:   270 TTYERQDQTYIVSTRHYRAPEVILGLGWSYPCDVWSVGCIIVELCTGEALFQTHENLEHL 329

Query:   123 AMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQ 175
             AMMERVLGP PQ MLK+VDRH+EKYVRRGRLDWP+GA SR+S+K+V+KLPRLQ
Sbjct:   330 AMMERVLGPFPQQMLKKVDRHSEKYVRRGRLDWPDGATSRDSLKAVLKLPRLQ 382

GO:0005634 "nucleus" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0004672 "protein kinase activity" evidence=IDA

GO:0005515 "protein binding" evidence=IPI

GO:0006397 "mRNA processing" evidence=IDA

GO:0004674 "protein serine/threonine kinase activity" evidence=IDA

GO:0046777 "protein autophosphorylation" evidence=IDA

GO:0045727 "positive regulation of translation" evidence=RCA

TAIR|locus:2084006 FC1 "FUS3-complementing gene 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 737 (264.5 bits), Expect = 1.9e-91, Sum P(2) = 1.9e-91
 Identities = 135/173 (78%), Positives = 151/173 (87%)

Query:     3 AVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGS 62
             A MHDL +IHTDLKPEN+LLVSSEYIK+PDYK      KD SYFK +PKSSAIK+IDFGS
Sbjct:   229 AYMHDLRLIHTDLKPENILLVSSEYIKIPDYKFLSRPTKDGSYFKNLPKSSAIKLIDFGS 288

Query:    63 TTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHL 122
             TT+E  D NYIVSTRHYRAPEVILG+GW YPCD+WS+GCILVELC+GEALFQTHENLEHL
Sbjct:   289 TTFEHQDHNYIVSTRHYRAPEVILGVGWNYPCDLWSIGCILVELCSGEALFQTHENLEHL 348

Query:   123 AMMERVLGPLPQHMLKRVDRHAEKYVRRG-RLDWPEGAASRESIKSVMKLPRL 174
             AMMERVLGPLP HM+ R DR +EKY RRG +LDWPEGA SR+S+K+V KLPRL
Sbjct:   349 AMMERVLGPLPPHMVLRADRRSEKYFRRGAKLDWPEGATSRDSLKAVWKLPRL 401

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0005739 "mitochondrion" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0005515 "protein binding" evidence=IPI

GO:0045727 "positive regulation of translation" evidence=RCA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=TAS

TAIR|locus:2125622 AME3 [Arabidopsis thaliana (taxid:3702)]

 Score = 612 (220.5 bits), Expect = 1.1e-70, Sum P(2) = 1.1e-70
 Identities = 115/174 (66%), Positives = 142/174 (81%)

Query:     3 AVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGS 62
             A MH+L ++HTDLKPEN+LLVSSE +K+PD K S     + ++F+ +PKSSAIK+IDFGS
Sbjct:   185 AYMHELQLVHTDLKPENILLVSSENVKLPDNKRSA---ANETHFRCLPKSSAIKLIDFGS 241

Query:    63 TTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHL 122
             T  +    + IV TRHYR+PEVILGLGW+Y CD+WS+GCIL ELCTGEALFQTH+NLEHL
Sbjct:   242 TVCDNRIHHSIVQTRHYRSPEVILGLGWSYQCDLWSIGCILFELCTGEALFQTHDNLEHL 301

Query:   123 AMMERVLGPLPQHMLKRVDRHAEKYVRRG-RLDWPEGAASRESIKSVMKLPRLQ 175
             AMMER LGPLP+HM ++  R AEKY RRG RL+WPEGA SRESI++V +L RL+
Sbjct:   302 AMMERALGPLPEHMTRKASRGAEKYFRRGCRLNWPEGANSRESIRAVKRLDRLK 355

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA;IDA

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0005737 "cytoplasm" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0046777 "protein autophosphorylation" evidence=IDA

GO:0045727 "positive regulation of translation" evidence=RCA

UNIPROTKB|E1B9Q2 CLK2 "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 436 (158.5 bits), Expect = 1.8e-48, Sum P(2) = 1.8e-48
 Identities = 82/166 (49%), Positives = 114/166 (68%)

Query:     5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
             +HD  + HTDLKPEN+L V+S+Y    +   +L   +D    +R  KS+A++V+DFGS T
Sbjct:   281 LHDNKLTHTDLKPENILFVNSDY----ELTYNLEKKRD----ERSVKSTAVRVVDFGSAT 332

Query:    65 YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAM 124
             ++    + IVSTRHYRAPEVIL LGW+ PCD+WS+GCI+ E   G  LFQTH+N EHLAM
Sbjct:   333 FDHEHHSTIVSTRHYRAPEVILELGWSQPCDVWSIGCIIFEYYVGFTLFQTHDNREHLAM 392

Query:   125 MERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMK 170
             MER+LGP+P  M+++  +  +KY  RGRLDW E  ++   ++   K
Sbjct:   393 MERILGPIPSRMIRKTRK--QKYFYRGRLDWDENTSAGRYVRENCK 436

GO:0046777 "protein autophosphorylation" evidence=IEA

GO:0045721 "negative regulation of gluconeogenesis" evidence=IEA

GO:0043484 "regulation of RNA splicing" evidence=IEA

GO:0032526 "response to retinoic acid" evidence=IEA

GO:0018108 "peptidyl-tyrosine phosphorylation" evidence=IEA

GO:0010212 "response to ionizing radiation" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

UNIPROTKB|F1P919 CLK2 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 436 (158.5 bits), Expect = 1.8e-48, Sum P(2) = 1.8e-48
 Identities = 82/166 (49%), Positives = 114/166 (68%)

Query:     5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
             +HD  + HTDLKPEN+L V+S+Y    +   +L   +D    +R  KS+A++V+DFGS T
Sbjct:   393 LHDNKLTHTDLKPENILFVNSDY----ELTYNLEKKRD----ERSVKSTAVRVVDFGSAT 444

Query:    65 YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAM 124
             ++    + IVSTRHYRAPEVIL LGW+ PCD+WS+GCI+ E   G  LFQTH+N EHLAM
Sbjct:   445 FDHEHHSTIVSTRHYRAPEVILELGWSQPCDVWSIGCIIFEYYVGFTLFQTHDNREHLAM 504

Query:   125 MERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMK 170
             MER+LGP+P  M+++  +  +KY  RGRLDW E  ++   ++   K
Sbjct:   505 MERILGPIPSRMIRKTRK--QKYFYRGRLDWDENTSAGRYVRENCK 548

GO:0005524 "ATP binding" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

UNIPROTKB|B1AVT0 CLK2 "Dual-specificity protein kinase CLK2" [Homo sapiens (taxid:9606)]

 Score = 436 (158.5 bits), Expect = 1.8e-48, Sum P(2) = 1.8e-48
 Identities = 82/166 (49%), Positives = 114/166 (68%)

Query:     5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
             +HD  + HTDLKPEN+L V+S+Y    +   +L   +D    +R  KS+A++V+DFGS T
Sbjct:   279 LHDNKLTHTDLKPENILFVNSDY----ELTYNLEKKRD----ERSVKSTAVRVVDFGSAT 330

Query:    65 YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAM 124
             ++    + IVSTRHYRAPEVIL LGW+ PCD+WS+GCI+ E   G  LFQTH+N EHLAM
Sbjct:   331 FDHEHHSTIVSTRHYRAPEVILELGWSQPCDVWSIGCIIFEYYVGFTLFQTHDNREHLAM 390

Query:   125 MERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMK 170
             MER+LGP+P  M+++  +  +KY  RGRLDW E  ++   ++   K
Sbjct:   391 MERILGPIPSRMIRKTRK--QKYFYRGRLDWDENTSAGRYVRENCK 434

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

UNIPROTKB|P49760 CLK2 "Dual specificity protein kinase CLK2" [Homo sapiens (taxid:9606)]

 Score = 436 (158.5 bits), Expect = 1.8e-48, Sum P(2) = 1.8e-48
 Identities = 82/166 (49%), Positives = 114/166 (68%)

Query:     5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
             +HD  + HTDLKPEN+L V+S+Y    +   +L   +D    +R  KS+A++V+DFGS T
Sbjct:   281 LHDNKLTHTDLKPENILFVNSDY----ELTYNLEKKRD----ERSVKSTAVRVVDFGSAT 332

Query:    65 YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAM 124
             ++    + IVSTRHYRAPEVIL LGW+ PCD+WS+GCI+ E   G  LFQTH+N EHLAM
Sbjct:   333 FDHEHHSTIVSTRHYRAPEVILELGWSQPCDVWSIGCIIFEYYVGFTLFQTHDNREHLAM 392

Query:   125 MERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMK 170
             MER+LGP+P  M+++  +  +KY  RGRLDW E  ++   ++   K
Sbjct:   393 MERILGPIPSRMIRKTRK--QKYFYRGRLDWDENTSAGRYVRENCK 436

GO:0005524 "ATP binding" evidence=IEA

GO:0004712 "protein serine/threonine/tyrosine kinase activity" evidence=IEA

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0018108 "peptidyl-tyrosine phosphorylation" evidence=IEA

GO:0032526 "response to retinoic acid" evidence=IEA

GO:0016607 "nuclear speck" evidence=IEA

GO:0043484 "regulation of RNA splicing" evidence=IDA

GO:0010212 "response to ionizing radiation" evidence=IMP

GO:0006468 "protein phosphorylation" evidence=IDA

GO:0005515 "protein binding" evidence=IPI

GO:0004674 "protein serine/threonine kinase activity" evidence=IDA

GO:0005634 "nucleus" evidence=IDA

GO:0045721 "negative regulation of gluconeogenesis" evidence=ISS

GO:0046777 "protein autophosphorylation" evidence=ISS

UNIPROTKB|F1RLJ5 CLK2 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 436 (158.5 bits), Expect = 1.8e-48, Sum P(2) = 1.8e-48
 Identities = 82/166 (49%), Positives = 114/166 (68%)

Query:     5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
             +HD  + HTDLKPEN+L V+S+Y    +   +L   +D    +R  KS+A++V+DFGS T
Sbjct:   281 LHDNKLTHTDLKPENILFVNSDY----ELTYNLEKKRD----ERSVKSTAVRVVDFGSAT 332

Query:    65 YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAM 124
             ++    + IVSTRHYRAPEVIL LGW+ PCD+WS+GCI+ E   G  LFQTH+N EHLAM
Sbjct:   333 FDHEHHSTIVSTRHYRAPEVILELGWSQPCDVWSIGCIIFEYYVGFTLFQTHDNREHLAM 392

Query:   125 MERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMK 170
             MER+LGP+P  M+++  +  +KY  RGRLDW E  ++   ++   K
Sbjct:   393 MERILGPIPSRMIRKTRK--QKYFYRGRLDWDENTSAGRYVRENCK 436

GO:0046777 "protein autophosphorylation" evidence=IEA

GO:0045721 "negative regulation of gluconeogenesis" evidence=IEA

GO:0043484 "regulation of RNA splicing" evidence=IEA

GO:0032526 "response to retinoic acid" evidence=IEA

GO:0018108 "peptidyl-tyrosine phosphorylation" evidence=IEA

GO:0010212 "response to ionizing radiation" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

MGI|MGI:1098669 Clk2 "CDC-like kinase 2" [Mus musculus (taxid:10090)]

 Score = 435 (158.2 bits), Expect = 4.7e-48, Sum P(2) = 4.7e-48
 Identities = 82/166 (49%), Positives = 114/166 (68%)

Query:     5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
             +HD  + HTDLKPEN+L V+S+Y    +   +L   +D    +R  KS+A++V+DFGS T
Sbjct:   280 LHDNKLTHTDLKPENILFVNSDY----ELTYNLEKKRD----ERSVKSTAVRVVDFGSAT 331

Query:    65 YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAM 124
             ++    + IVSTRHYRAPEVIL LGW+ PCD+WS+GCI+ E   G  LFQTH+N EHLAM
Sbjct:   332 FDHEHHSTIVSTRHYRAPEVILELGWSQPCDVWSIGCIIFEYYVGFTLFQTHDNREHLAM 391

Query:   125 MERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMK 170
             MER+LGP+P  M+++  +  +KY  RGRLDW E  ++   ++   K
Sbjct:   392 MERILGPVPSRMIRKTRK--QKYFYRGRLDWDENTSAGRYVRENCK 435

GO:0000166 "nucleotide binding" evidence=IEA

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=ISO;IDA

GO:0004712 "protein serine/threonine/tyrosine kinase activity" evidence=IEA

GO:0004713 "protein tyrosine kinase activity" evidence=IDA

GO:0005524 "ATP binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISO;IDA

GO:0006468 "protein phosphorylation" evidence=IEA;ISO;IDA

GO:0010212 "response to ionizing radiation" evidence=ISO

GO:0016301 "kinase activity" evidence=IEA

GO:0016310 "phosphorylation" evidence=IEA

GO:0016740 "transferase activity" evidence=IEA

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0018108 "peptidyl-tyrosine phosphorylation" evidence=IDA

GO:0032526 "response to retinoic acid" evidence=IDA

GO:0042221 "response to chemical stimulus" evidence=IDA

GO:0043484 "regulation of RNA splicing" evidence=ISO

GO:0045721 "negative regulation of gluconeogenesis" evidence=IMP

GO:0046777 "protein autophosphorylation" evidence=IDA

RGD|1359711 Clk2 "CDC-like kinase 2" [Rattus norvegicus (taxid:10116)]

 Score = 435 (158.2 bits), Expect = 4.7e-48, Sum P(2) = 4.7e-48
 Identities = 82/166 (49%), Positives = 114/166 (68%)

Query:     5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
             +HD  + HTDLKPEN+L V+S+Y    +   +L   +D    +R  KS+A++V+DFGS T
Sbjct:   281 LHDNKLTHTDLKPENILFVNSDY----ELTYNLEKKRD----ERSVKSTAVRVVDFGSAT 332

Query:    65 YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAM 124
             ++    + IVSTRHYRAPEVIL LGW+ PCD+WS+GCI+ E   G  LFQTH+N EHLAM
Sbjct:   333 FDHEHHSTIVSTRHYRAPEVILELGWSQPCDVWSIGCIIFEYYVGFTLFQTHDNREHLAM 392

Query:   125 MERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMK 170
             MER+LGP+P  M+++  +  +KY  RGRLDW E  ++   ++   K
Sbjct:   393 MERILGPVPSRMIRKTRK--QKYFYRGRLDWDENTSAGRYVRENCK 436

GO:0004674 "protein serine/threonine kinase activity" evidence=ISO

GO:0004713 "protein tyrosine kinase activity" evidence=ISO

GO:0005634 "nucleus" evidence=ISO

GO:0006468 "protein phosphorylation" evidence=ISO

GO:0010212 "response to ionizing radiation" evidence=ISO

GO:0018108 "peptidyl-tyrosine phosphorylation" evidence=ISO

GO:0032526 "response to retinoic acid" evidence=ISO

GO:0042221 "response to chemical stimulus" evidence=ISO

GO:0043484 "regulation of RNA splicing" evidence=ISO

GO:0045721 "negative regulation of gluconeogenesis" evidence=ISO

GO:0046777 "protein autophosphorylation" evidence=ISO

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	2.7.12	0.766
4th Layer	2.7.11.1	LOW CONFIDENCE prediction!
3rd Layer	2.7.11	LOW CONFIDENCE prediction!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	252
PTZ00284	467	PTZ00284, PTZ00284, protein kinase; Provisional	9e-37
smart00220	254	smart00220, S_TKc, Serine/Threonine protein kinase	5e-29
pfam00069	260	pfam00069, Pkinase, Protein kinase domain	3e-28
cd07829	282	cd07829, STKc_CDK_like, Catalytic domain of Cyclin	8e-28
cd07830	283	cd07830, STKc_MAK_like, Catalytic domain of Male g	1e-26
cd07834	330	cd07834, STKc_MAPK, Catalytic domain of the Serine	2e-25
cd07838	287	cd07838, STKc_CDK4_6_like, Catalytic domain of Cyc	1e-24
cd05118	283	cd05118, STKc_CMGC, Catalytic domain of CMGC famil	2e-24
cd07832	286	cd07832, STKc_CCRK, Catalytic domain of the Serine	1e-21
cd07841	298	cd07841, STKc_CDK7, Catalytic domain of the Serine	3e-21
cd07880	343	cd07880, STKc_p38gamma_MAPK12, Catalytic domain of	5e-20
cd07855	334	cd07855, STKc_ERK5, Catalytic domain of the Serine	6e-20
cd07833	288	cd07833, STKc_CDKL, Catalytic domain of Cyclin-Dep	5e-19
cd07848	287	cd07848, STKc_CDKL5, Catalytic domain of the Serin	8e-19
cd07836	284	cd07836, STKc_Pho85, Catalytic domain of the Serin	1e-18
cd07853	372	cd07853, STKc_NLK, Catalytic domain of the Serine/	1e-18
cd07879	342	cd07879, STKc_p38delta_MAPK13, Catalytic domain of	1e-18
cd07847	286	cd07847, STKc_CDKL1_4, Catalytic domain of the Ser	2e-18
cd07861	285	cd07861, STKc_CDK1_euk, Catalytic domain of the Se	3e-18
PTZ00024	335	PTZ00024, PTZ00024, cyclin-dependent protein kinas	3e-18
cd07842	316	cd07842, STKc_CDK8_like, Catalytic domain of Cycli	3e-18
cd07852	337	cd07852, STKc_MAPK15, Catalytic domain of the Seri	4e-18
cd07840	287	cd07840, STKc_CDK9_like, Catalytic domain of Cycli	4e-18
cd07877	345	cd07877, STKc_p38alpha_MAPK14, Catalytic domain of	1e-17
cd07856	328	cd07856, STKc_Sty1_Hog1, Catalytic domain of the S	1e-17
cd07851	343	cd07851, STKc_p38, Catalytic domain of the Serine/	3e-17
cd07850	353	cd07850, STKc_JNK, Catalytic domain of the Serine/	7e-17
cd05572	262	cd05572, STKc_cGK_PKG, Catalytic domain of the Pro	1e-16
cd07835	283	cd07835, STKc_CDK1_like, Catalytic domain of Cycli	2e-16
cd00180	215	cd00180, PKc, Catalytic domain of Protein Kinases	3e-16
cd07860	284	cd07860, STKc_CDK2_3, Catalytic domain of the Seri	1e-15
cd07857	332	cd07857, STKc_MPK1, Catalytic domain of the Serine	1e-15
cd07878	343	cd07878, STKc_p38beta_MAPK11, Catalytic domain of	1e-15
cd07843	293	cd07843, STKc_CDC2L1, Catalytic domain of the Seri	1e-15
cd05579	265	cd05579, STKc_MAST_like, Catalytic domain of Micro	1e-15
cd07849	336	cd07849, STKc_ERK1_2_like, Catalytic domain of Ext	2e-15
cd07876	359	cd07876, STKc_JNK2, Catalytic domain of the Serine	2e-15
cd07859	338	cd07859, STKc_TDY_MAPK_plant, Catalytic domain of	3e-15
cd05123	250	cd05123, STKc_AGC, Catalytic domain of AGC family	4e-15
cd07866	311	cd07866, STKc_BUR1, Catalytic domain of the Serine	6e-15
cd07858	337	cd07858, STKc_TEY_MAPK_plant, Catalytic domain of	1e-14
cd06626	264	cd06626, STKc_MEKK4, Catalytic domain of the Prote	1e-14
cd07846	286	cd07846, STKc_CDKL2_3, Catalytic domain of the Ser	1e-14
cd05581	280	cd05581, STKc_PDK1, Catalytic domain of the Protei	1e-14
cd07831	282	cd07831, STKc_MOK, Catalytic domain of the Serine/	2e-14
cd06606	260	cd06606, STKc_MAPKKK, Catalytic domain of the Prot	2e-14
PLN00009	294	PLN00009, PLN00009, cyclin-dependent kinase A; Pro	3e-14
cd05122	253	cd05122, PKc_STE, Catalytic domain of STE family P	5e-14
cd07874	355	cd07874, STKc_JNK3, Catalytic domain of the Serine	6e-14
cd05573	350	cd05573, STKc_ROCK_NDR_like, Catalytic domain of R	7e-14
cd07845	309	cd07845, STKc_CDK10, Catalytic domain of the Serin	1e-13
cd05599	364	cd05599, STKc_NDR_like, Catalytic domain of Nuclea	1e-13
cd07864	302	cd07864, STKc_CDK12, Catalytic domain of the Serin	2e-13
cd07875	364	cd07875, STKc_JNK1, Catalytic domain of the Serine	3e-13
cd08215	258	cd08215, STKc_Nek, Catalytic domain of the Protein	4e-13
cd07871	288	cd07871, STKc_PCTAIRE3, Catalytic domain of the Se	7e-13
cd08530	256	cd08530, STKc_CNK2-like, Catalytic domain of the P	7e-13
cd07863	288	cd07863, STKc_CDK4, Catalytic domain of the Serine	1e-12
cd07837	295	cd07837, STKc_CdkB_plant, Catalytic domain of the	2e-12
cd07867	317	cd07867, STKc_CDC2L6, Catalytic domain of Serine/T	4e-12
cd05611	260	cd05611, STKc_Rim15_like, Catalytic domain of fung	4e-12
cd07839	284	cd07839, STKc_CDK5, Catalytic domain of the Serine	6e-12
PTZ00036	440	PTZ00036, PTZ00036, glycogen synthase kinase; Prov	7e-12
cd07862	290	cd07862, STKc_CDK6, Catalytic domain of the Serine	9e-12
cd07844	291	cd07844, STKc_PCTAIRE_like, Catalytic domain of PC	1e-11
COG0515	384	COG0515, SPS1, Serine/threonine protein kinase [Ge	2e-11
cd06627	254	cd06627, STKc_Cdc7_like, Catalytic domain of Cell	2e-11
cd06630	268	cd06630, STKc_MEKK1, Catalytic domain of the Prote	3e-11
cd05600	333	cd05600, STKc_Sid2p_Dbf2p, Catalytic domain of Fun	4e-11
cd05629	377	cd05629, STKc_NDR_like_fungal, Catalytic domain of	6e-11
cd07873	301	cd07873, STKc_PCTAIRE1, Catalytic domain of the Se	7e-11
cd08217	265	cd08217, STKc_Nek2, Catalytic domain of the Protei	7e-11
cd07868	317	cd07868, STKc_CDK8, Catalytic domain of the Serine	8e-11
cd05625	382	cd05625, STKc_LATS1, Catalytic domain of the Prote	1e-10
cd06625	263	cd06625, STKc_MEKK3_like, Catalytic domain of MAP/	4e-10
cd05582	318	cd05582, STKc_RSK_N, N-terminal catalytic domain o	5e-10
cd05598	376	cd05598, STKc_LATS, Catalytic domain of the Protei	6e-10
cd06623	264	cd06623, PKc_MAPKK_plant_like, Catalytic domain of	1e-09
cd05630	285	cd05630, STKc_GRK6, Catalytic domain of the Protei	2e-09
cd06614	286	cd06614, STKc_PAK, Catalytic domain of the Protein	5e-09
cd05626	381	cd05626, STKc_LATS2, Catalytic domain of the Prote	6e-09
cd06658	292	cd06658, STKc_PAK5, Catalytic domain of the Protei	8e-09
cd06612	256	cd06612, STKc_MST1_2, Catalytic domain of the Prot	8e-09
cd06609	274	cd06609, STKc_MST3_like, Catalytic domain of Mamma	1e-08
cd06605	265	cd06605, PKc_MAPKK, Catalytic domain of the dual-s	2e-08
cd05580	290	cd05580, STKc_PKA, Catalytic domain of the Protein	2e-08
cd06624	268	cd06624, STKc_ASK, Catalytic domain of the Protein	2e-08
cd05577	277	cd05577, STKc_GRK, Catalytic domain of the Protein	3e-08
cd08221	256	cd08221, STKc_Nek9, Catalytic domain of the Protei	3e-08
cd05609	305	cd05609, STKc_MAST, Catalytic domain of the Protei	3e-08
cd08219	255	cd08219, STKc_Nek3, Catalytic domain of the Protei	4e-08
cd05627	360	cd05627, STKc_NDR2, Catalytic domain of the Protei	4e-08
cd07870	291	cd07870, STKc_PFTAIRE2, Catalytic domain of the Se	4e-08
cd07865	310	cd07865, STKc_CDK9, Catalytic domain of the Serine	6e-08
cd05628	363	cd05628, STKc_NDR1, Catalytic domain of the Protei	6e-08
cd05601	330	cd05601, STKc_CRIK, Catalytic domain of the Protei	8e-08
cd07872	309	cd07872, STKc_PCTAIRE2, Catalytic domain of the Se	9e-08
cd08528	269	cd08528, STKc_Nek10, Catalytic domain of the Prote	9e-08
cd06632	258	cd06632, STKc_MEKK1_plant, Catalytic domain of the	2e-07
cd05585	312	cd05585, STKc_YPK1_like, Catalytic domain of Yeast	2e-07
cd06631	265	cd06631, STKc_YSK4, Catalytic domain of the Protei	3e-07
cd06610	267	cd06610, STKc_OSR1_SPAK, Catalytic domain of the P	3e-07
cd05574	316	cd05574, STKc_phototropin_like, Catalytic domain o	3e-07
cd05631	285	cd05631, STKc_GRK4, Catalytic domain of the Protei	5e-07
cd06651	266	cd06651, STKc_MEKK3, Catalytic domain of the Prote	9e-07
cd07854	342	cd07854, STKc_MAPK4_6, Catalytic domain of the Ser	1e-06
cd05596	370	cd05596, STKc_ROCK, Catalytic domain of the Protei	1e-06
cd06628	267	cd06628, STKc_MAPKKK_Byr2_like, Catalytic domain o	1e-06
cd07869	303	cd07869, STKc_PFTAIRE1, Catalytic domain of the Se	1e-06
cd05607	277	cd05607, STKc_GRK7, Catalytic domain of the Protei	2e-06
cd06615	308	cd06615, PKc_MEK, Catalytic domain of the dual-spe	2e-06
cd05605	285	cd05605, STKc_GRK4_like, Catalytic domain of G pro	2e-06
cd06652	265	cd06652, STKc_MEKK2, Catalytic domain of the Prote	2e-06
cd06607	307	cd06607, STKc_TAO, Catalytic domain of the Protein	2e-06
PTZ00426	340	PTZ00426, PTZ00426, cAMP-dependent protein kinase	2e-06
cd05632	285	cd05632, STKc_GRK5, Catalytic domain of the Protei	2e-06
cd06657	292	cd06657, STKc_PAK4, Catalytic domain of the Protei	3e-06
cd08224	267	cd08224, STKc_Nek6_Nek7, Catalytic domain of the P	3e-06
cd08223	257	cd08223, STKc_Nek4, Catalytic domain of the Protei	3e-06
PTZ00266	1021	PTZ00266, PTZ00266, NIMA-related protein kinase; P	3e-06
smart00220	254	smart00220, S_TKc, Serine/Threonine protein kinase	4e-06
cd06620	284	cd06620, PKc_MAPKK_Byr1_like, Catalytic domain of	4e-06
cd05622	371	cd05622, STKc_ROCK1, Catalytic domain of the Prote	5e-06
cd08220	256	cd08220, STKc_Nek8, Catalytic domain of the Protei	5e-06
PTZ00263	329	PTZ00263, PTZ00263, protein kinase A catalytic sub	5e-06
cd06633	313	cd06633, STKc_TAO3, Catalytic domain of the Protei	7e-06
cd05586	330	cd05586, STKc_Sck1_like, Catalytic domain of Suppr	7e-06
cd05578	258	cd05578, STKc_Yank1, Catalytic domain of the Prote	9e-06
cd08225	257	cd08225, STKc_Nek5, Catalytic domain of the Protei	9e-06
cd05624	331	cd05624, STKc_MRCK_beta, Catalytic domain of the P	1e-05
cd08222	260	cd08222, STKc_Nek11, Catalytic domain of the Prote	1e-05
cd06653	264	cd06653, STKc_MEKK3_like_1, Catalytic domain of MA	1e-05
cd06621	287	cd06621, PKc_MAPKK_Pek1_like, Catalytic domain of	1e-05
cd06659	297	cd06659, STKc_PAK6, Catalytic domain of the Protei	2e-05
cd05619	316	cd05619, STKc_nPKC_theta, Catalytic domain of the	2e-05
cd06648	285	cd06648, STKc_PAK_II, Catalytic domain of the Prot	2e-05
cd05621	370	cd05621, STKc_ROCK2, Catalytic domain of the Prote	2e-05
cd06917	277	cd06917, STKc_NAK1_like, Catalytic domain of Funga	2e-05
cd05613	290	cd05613, STKc_MSK1_N, N-terminal catalytic domain	2e-05
cd05584	323	cd05584, STKc_p70S6K, Catalytic domain of the Prot	3e-05
cd05620	316	cd05620, STKc_nPKC_delta, Catalytic domain of the	3e-05
cd07831	282	cd07831, STKc_MOK, Catalytic domain of the Serine/	4e-05
cd05606	278	cd05606, STKc_beta_ARK, Catalytic domain of the Pr	4e-05
cd06642	277	cd06642, STKc_STK25-YSK1, Catalytic domain of the	4e-05
cd06656	297	cd06656, STKc_PAK3, Catalytic domain of the Protei	4e-05
cd05618	329	cd05618, STKc_aPKC_iota, Catalytic domain of the P	4e-05
cd06654	296	cd06654, STKc_PAK1, Catalytic domain of the Protei	5e-05
cd06649	331	cd06649, PKc_MEK2, Catalytic domain of the dual-sp	5e-05
cd06655	296	cd06655, STKc_PAK2, Catalytic domain of the Protei	5e-05
cd08228	267	cd08228, STKc_Nek6, Catalytic domain of the Protei	5e-05
cd07843	293	cd07843, STKc_CDC2L1, Catalytic domain of the Seri	6e-05
cd06629	272	cd06629, STKc_MAPKKK_Bck1_like, Catalytic domain o	6e-05
cd06613	262	cd06613, STKc_MAP4K3_like, Catalytic domain of Mit	6e-05
cd05597	331	cd05597, STKc_DMPK_like, Catalytic domain of Myoto	7e-05
cd08229	267	cd08229, STKc_Nek7, Catalytic domain of the Protei	7e-05
cd06635	317	cd06635, STKc_TAO1, Catalytic domain of the Protei	7e-05
cd06650	333	cd06650, PKc_MEK1, Catalytic domain of the dual-sp	8e-05
PTZ00267	478	PTZ00267, PTZ00267, NIMA-related protein kinase; P	8e-05
cd05570	318	cd05570, STKc_PKC, Catalytic domain of the Protein	8e-05
cd07854	342	cd07854, STKc_MAPK4_6, Catalytic domain of the Ser	1e-04
cd08218	256	cd08218, STKc_Nek1, Catalytic domain of the Protei	1e-04
cd06641	277	cd06641, STKc_MST3, Catalytic domain of the Protei	1e-04
cd05594	325	cd05594, STKc_PKB_alpha, Catalytic domain of the P	1e-04
cd06640	277	cd06640, STKc_MST4, Catalytic domain of the Protei	1e-04
cd06647	293	cd06647, STKc_PAK_I, Catalytic domain of the Prote	1e-04
cd05623	332	cd05623, STKc_MRCK_alpha, Catalytic domain of the	1e-04
cd07833	288	cd07833, STKc_CDKL, Catalytic domain of Cyclin-Dep	2e-04
cd07845	309	cd07845, STKc_CDK10, Catalytic domain of the Serin	2e-04
cd05576	237	cd05576, STKc_RPK118_like, Catalytic domain of the	2e-04
cd05633	279	cd05633, STKc_GRK3, Catalytic domain of the Protei	2e-04
cd05583	288	cd05583, STKc_MSK_N, N-terminal catalytic domain o	2e-04
cd06644	292	cd06644, STKc_STK10_LOK, Catalytic domain of the P	2e-04
cd06639	291	cd06639, STKc_myosinIIIB, Catalytic domain of the	2e-04
cd06616	288	cd06616, PKc_MKK4, Catalytic domain of the dual-sp	2e-04
cd05588	329	cd05588, STKc_aPKC, Catalytic domain of the Protei	2e-04
cd06634	308	cd06634, STKc_TAO2, Catalytic domain of the Protei	2e-04
cd06608	275	cd06608, STKc_myosinIII_like, Catalytic domain of	3e-04
cd05617	327	cd05617, STKc_aPKC_zeta, Catalytic domain of the P	4e-04
cd06619	279	cd06619, PKc_MKK5, Catalytic domain of the dual-sp	4e-04
cd05592	316	cd05592, STKc_nPKC_theta_delta, Catalytic domain o	4e-04
cd08529	256	cd08529, STKc_FA2-like, Catalytic domain of the Pr	5e-04
cd05614	332	cd05614, STKc_MSK2_N, N-terminal catalytic domain	5e-04
cd06618	296	cd06618, PKc_MKK7, Catalytic domain of the dual-sp	5e-04
cd05571	323	cd05571, STKc_PKB, Catalytic domain of the Protein	7e-04
cd06638	286	cd06638, STKc_myosinIIIA, Catalytic domain of the	7e-04
cd06611	280	cd06611, STKc_SLK_like, Catalytic domain of Ste20-	7e-04
cd05593	328	cd05593, STKc_PKB_gamma, Catalytic domain of the P	8e-04
cd05575	323	cd05575, STKc_SGK, Catalytic domain of the Protein	8e-04
PTZ00283	496	PTZ00283, PTZ00283, serine/threonine protein kinas	0.001
cd05612	291	cd05612, STKc_PRKX_like, Catalytic domain of PRKX-	0.001
cd05604	325	cd05604, STKc_SGK3, Catalytic domain of the Protei	0.001
cd05116	257	cd05116, PTKc_Syk, Catalytic domain of the Protein	0.001
cd07837	295	cd07837, STKc_CdkB_plant, Catalytic domain of the	0.002
cd06643	282	cd06643, STKc_SLK, Catalytic domain of the Protein	0.002
cd05045	290	cd05045, PTKc_RET, Catalytic domain of the Protein	0.002
cd06617	283	cd06617, PKc_MKK3_6, Catalytic domain of the dual-	0.002
cd06637	272	cd06637, STKc_TNIK, Catalytic domain of the Protei	0.002
cd05115	257	cd05115, PTKc_Zap-70, Catalytic domain of the Prot	0.002
cd05602	325	cd05602, STKc_SGK1, Catalytic domain of the Protei	0.004
cd05595	323	cd05595, STKc_PKB_beta, Catalytic domain of the Pr	0.004

>gnl|CDD|140307 PTZ00284, PTZ00284, protein kinase; Provisional

 Score =  134 bits (339), Expect = 9e-37
 Identities = 85/242 (35%), Positives = 120/242 (49%), Gaps = 55/242 (22%)

Query: 7   DLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYE 66
           +L ++HTDLKPEN+L+ +S+   V D  ++   P         P    +++ D G    E
Sbjct: 250 ELHLMHTDLKPENILMETSD--TVVDPVTNRALP---------PDPCRVRICDLGGCCDE 298

Query: 67  RPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMME 126
           R  +  IVSTRHYR+PEV+LGLGW Y  D+WS+GCI+ EL TG+ L+ TH+NLEHL +ME
Sbjct: 299 RHSRTAIVSTRHYRSPEVVLGLGWMYSTDMWSMGCIIYELYTGKLLYDTHDNLEHLHLME 358

Query: 127 RVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVPFFYGSFVEF 186
           + LG LP                    +W     + E+        RL     Y S  + 
Sbjct: 359 KTLGRLPS-------------------EWAGRCGTEEA--------RL----LYNSAGQL 387

Query: 187 KGYCLAFRCTDC--IASFCQNLIMQHV--DHSAGDLTHLLQGLLRYDPTDRLTAREALRH 242
           +       CTD   +A   +   ++ V  D    DL +   GLL YD   RL AR+   H
Sbjct: 388 R------PCTDPKHLARIARARPVREVIRDDLLCDLIY---GLLHYDRQKRLNARQMTTH 438

Query: 243 PF 244
           P+
Sbjct: 439 PY 440

Length = 467

>gnl|CDD|214567 smart00220, S_TKc, Serine/Threonine protein kinases, catalytic domain

 Score =  109 bits (275), Expect = 5e-29
 Identities = 40/131 (30%), Positives = 57/131 (43%), Gaps = 31/131 (23%)

Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           +H   ++H DLKPEN+LL    +                           +K+ DFG   
Sbjct: 113 LHSKGIVHRDLKPENILLDEDGH---------------------------VKLADFGLAR 145

Query: 65  YERPDQNY--IVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHL 122
              P +     V T  Y APEV+LG G+    DIWS+G IL EL TG+  F   + L   
Sbjct: 146 QLDPGEKLTTFVGTPEYMAPEVLLGKGYGKAVDIWSLGVILYELLTGKPPFPGDDQLL-- 203

Query: 123 AMMERVLGPLP 133
            + +++  P P
Sbjct: 204 ELFKKIGKPKP 214

Phosphotransferases. Serine or threonine-specific kinase subfamily. Length = 254

>gnl|CDD|215690 pfam00069, Pkinase, Protein kinase domain

 Score =  107 bits (270), Expect = 3e-28
 Identities = 59/245 (24%), Positives = 85/245 (34%), Gaps = 102/245 (41%)

Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG-ST 63
           +H   +IH DLKPEN+LL  +  +K+                            DFG + 
Sbjct: 114 LHSNGIIHRDLKPENILLDENGVVKI---------------------------ADFGLAK 146

Query: 64  TYERPDQNY--IVSTRHYRAPEVIL-GLGWTYPCDIWSVGCILVELCTGEALFQTHENLE 120
              +   +    V T  Y APEV+L G G+    D+WS+G IL EL TG+  F     L+
Sbjct: 147 KLLKSSSSLTTFVGTPWYMAPEVLLGGNGYGPKVDVWSLGVILYELLTGKPPFSGENILD 206

Query: 121 HLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVPFFY 180
            L ++ R+LGP                      D P+ ++  E  K ++K          
Sbjct: 207 QLQLIRRILGPPL------------------EFDEPKWSSGSEEAKDLIK---------- 238

Query: 181 GSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREAL 240
                    CL                                     DP+ R TA E L
Sbjct: 239 --------KCL-----------------------------------NKDPSKRPTAEEIL 255

Query: 241 RHPFF 245
           +HP+F
Sbjct: 256 QHPWF 260

Length = 260

>gnl|CDD|173733 cd07829, STKc_CDK_like, Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases

 Score =  107 bits (269), Expect = 8e-28
 Identities = 65/246 (26%), Positives = 101/246 (41%), Gaps = 82/246 (33%)

Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG-ST 63
            H   ++H DLKP+N +L++ + +                          +K+ DFG + 
Sbjct: 114 CHSHRILHRDLKPQN-ILINRDGV--------------------------LKLADFGLAR 146

Query: 64  TYERPDQNYI--VSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHENLE 120
            +  P + Y   V T  YRAPE++LG   ++   DIWSVGCI  E+ TG+ LF     ++
Sbjct: 147 AFGIPLRTYTHEVVTLWYRAPEILLGSKHYSTAVDIWSVGCIFAEMITGKPLFPGDSEID 206

Query: 121 HLAMMERVLG-PLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVPFF 179
            L  + ++LG P  +                    WP           V KLP      +
Sbjct: 207 QLFKIFQILGTPTEE-------------------SWPG----------VTKLP-----DY 232

Query: 180 YGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREA 239
             +F +F    L              L     D    DL   L  +L+Y+P  R++A+EA
Sbjct: 233 KPTFPKFPPKDLE--------KVLPRL-----DPEGIDL---LSKMLQYNPAKRISAKEA 276

Query: 240 LRHPFF 245
           L+HP+F
Sbjct: 277 LKHPYF 282

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the early G1 phase by CDK4 or CDK6, the G1/S phase transition by CDK2, or the entry of mitosis by CDK1. They also exhibit overlapping cyclin specificity and functions in certain conditions. Knockout mice with a single CDK deleted remain viable with specific phenotypes, showing that some CDKs can compensate for each other. For example, CDK4 can compensate for the loss of CDK6, however, double knockout mice with both CDK4 and CDK6 deleted die in utero. CDK8 and CDK9 are mainly involved in transcription while CDK5 is implicated in neuronal function. CDK7 plays essential roles in both the cell cycle as a CDK-Activating Kinase (CAK) and in transcription as a component of the general transcription factor TFIIH. Length = 282

>gnl|CDD|173734 cd07830, STKc_MAK_like, Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases

 Score =  104 bits (261), Expect = 1e-26
 Identities = 71/248 (28%), Positives = 97/248 (39%), Gaps = 86/248 (34%)

Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG--S 62
           +H     H DLKPEN LLVS   +                          +K+ DFG   
Sbjct: 115 IHKHGFFHRDLKPEN-LLVSGPEV--------------------------VKIADFGLAR 147

Query: 63  TTYERPDQNYIVSTRHYRAPEVILGLGWTY--PCDIWSVGCILVELCTGEALFQTHENLE 120
               RP     VSTR YRAPE++L     Y  P DIW++GCI+ EL T   LF     ++
Sbjct: 148 EIRSRPPYTDYVSTRWYRAPEILLRSTS-YSSPVDIWALGCIMAELYTLRPLFPGSSEID 206

Query: 121 HLAMMERVLG-PLPQHMLKRVDRHAEKYVRRGRLDWPEGA--ASRESIKSVMKLPRLQVP 177
            L  +  VLG P  Q                   DWPEG   AS+               
Sbjct: 207 QLYKICSVLGTPTKQ-------------------DWPEGYKLASK--------------- 232

Query: 178 FFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAR 237
                        L FR            + Q + +++ +   L++ +LR+DP  R TA 
Sbjct: 233 -------------LGFRFPQFA----PTSLHQLIPNASPEAIDLIKDMLRWDPKKRPTAS 275

Query: 238 EALRHPFF 245
           +AL+HP+F
Sbjct: 276 QALQHPYF 283

Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertility. It functions as a coactivator of the androgen receptor in prostate cells. MRK, also called Intestinal Cell Kinase (ICK), is expressed ubiquitously, with highest expression in the ovary and uterus. A missense mutation in MRK causes endocrine-cerebro-osteodysplasia (ECO), suggesting that this protein plays an important role in the development of many organs. MAK and MRK may be involved in regulating cell cycle and cell fate. Ime2p is a meiosis-specific kinase that is important during meiotic initiation and during the later stages of meiosis. Mde3 functions downstream of the transcription factor Mei-4 which is essential for meiotic prophase I. Length = 283

>gnl|CDD|173737 cd07834, STKc_MAPK, Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase

 Score =  101 bits (255), Expect = 2e-25
 Identities = 66/253 (26%), Positives = 97/253 (38%), Gaps = 83/253 (32%)

Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG--- 61
           +H   +IH DLKP N+L+ S+                             +K+ DFG   
Sbjct: 119 LHSANVIHRDLKPSNILVNSN---------------------------CDLKICDFGLAR 151

Query: 62  -STTYERPDQN---YIVSTRHYRAPEVILGL-GWTYPCDIWSVGCILVELCTGEALFQTH 116
                E        Y+V TR YRAPE++L    +T   DIWSVGCI  EL T + LF   
Sbjct: 152 GVDPDEDEKGFLTEYVV-TRWYRAPELLLSSSRYTKAIDIWSVGCIFAELLTRKPLFPGR 210

Query: 117 ENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQV 176
           + ++ L ++  VLG   +  LK +                    +R  +KS+ K P+   
Sbjct: 211 DYIDQLNLIVEVLGTPSEEDLKFI----------------TSEKARNYLKSLPKKPKK-- 252

Query: 177 PFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTA 236
                                      +  +       A D   LL+ +L +DP  R+TA
Sbjct: 253 ------------------------PLSK--LFPGASPEAID---LLEKMLVFDPKKRITA 283

Query: 237 REALRHPFFTRDH 249
            EAL HP+  + H
Sbjct: 284 DEALAHPYLAQLH 296

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and activated by a MAPK kinase (MAP2K or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAP3K or MKKK). Each cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. There are three main typical MAPK subfamilies: Extracellular signal-Regulated Kinase (ERK), c-Jun N-terminal Kinase (JNK), and p38. Some MAPKs are atypical in that they are not regulated by MAP2Ks. These include MAPK4, MAPK6, NLK, and ERK7. Length = 330

>gnl|CDD|173739 cd07838, STKc_CDK4_6_like, Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases

 Score = 98.9 bits (247), Expect = 1e-24
 Identities = 55/244 (22%), Positives = 90/244 (36%), Gaps = 82/244 (33%)

Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGS-- 62
           +H   ++H DLKP+N+L+ S   +K+ D+  +                   ++  F    
Sbjct: 123 LHSHRIVHRDLKPQNILVTSDGQVKIADFGLA-------------------RIYSFEMAL 163

Query: 63  TTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHL 122
           T+        +V T  YRAPEV+L   +  P D+WSVGCI  EL     LF+     + L
Sbjct: 164 TS--------VVVTLWYRAPEVLLQSSYATPVDMWSVGCIFAELFRRRPLFRGTSEADQL 215

Query: 123 AMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAA-SRESIKSVMKLPRLQVPFFYG 181
             +  V+G   +                   +WP   +  R S             F   
Sbjct: 216 DKIFDVIGLPSEE------------------EWPRNVSLPRSSFP-----SYTPRSF--- 249

Query: 182 SFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALR 241
                            +   C+            +   LL+ +L ++P  R++A EAL+
Sbjct: 250 --------------KSFVPEICE------------EGLDLLKKMLTFNPHKRISAFEALQ 283

Query: 242 HPFF 245
           HP+F
Sbjct: 284 HPYF 287

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both expressed ubiquitously, associate with all three D cyclins (D1, D2 and D3), and phosphorylate the retinoblastoma (pRb) protein. They are also regulated by the INK4 family of inhibitors which associate with either the CDK alone or the CDK/cyclin complex. CDK4 and CDK6 show differences in subcellular localization, sensitivity to some inhibitors, timing in activation, tumor selectivity, and possibly substrate profiles. Although CDK4 and CDK6 seem to show some redundancy, they also have discrete, nonoverlapping functions. CDK6 plays an important role in cell differentiation. Length = 287

>gnl|CDD|143333 cd05118, STKc_CMGC, Catalytic domain of CMGC family Serine/Threonine Kinases

 Score = 97.8 bits (244), Expect = 2e-24
 Identities = 64/240 (26%), Positives = 88/240 (36%), Gaps = 81/240 (33%)

Query: 11  IHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ 70
           +H DLKPEN+L+                                +K+ DFG         
Sbjct: 120 LHRDLKPENLLI---------------------------NTEGVLKLADFGLARSFGSPV 152

Query: 71  NYI---VSTRHYRAPEVILGL-GWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMME 126
                 V TR YRAPE++LG  G++ P DIWSVGCI  EL +   LF     ++ L  + 
Sbjct: 153 RPYTHYVVTRWYRAPELLLGDKGYSTPVDIWSVGCIFAELLSRRPLFPGKSEIDQLFKIF 212

Query: 127 RVLG-PLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVPFFYGSFVE 185
           R LG P P+                    WP+  +                  +  SF +
Sbjct: 213 RTLGTPDPEV-------------------WPKFTSL--------------ARNYKFSFPK 239

Query: 186 FKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFF 245
             G  L               +  +    A D   LL  +L YDP  R+TA +AL HP+F
Sbjct: 240 KAGMPL-------------PKLFPNASPQALD---LLSQMLHYDPHKRITAEQALAHPYF 283

Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Length = 283

>gnl|CDD|173736 cd07832, STKc_CCRK, Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase

 Score = 90.8 bits (226), Expect = 1e-21
 Identities = 68/250 (27%), Positives = 100/250 (40%), Gaps = 82/250 (32%)

Query: 3   AVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSS--LHTPKDSSYFKRMPKSSAIKVIDF 60
           A MH   ++H DLKP N+L+ +   +K+ D+  +      +   Y  +            
Sbjct: 113 AYMHANGIMHRDLKPANLLISADGVLKIADFGLARLFSEEEPRLYSHQ------------ 160

Query: 61  GSTTYERPDQNYIVSTRHYRAPEVILGL-GWTYPCDIWSVGCILVELCTGEALFQTHENL 119
                        V+TR YRAPE++ G   +    D+W+VGCI  EL  G  LF    ++
Sbjct: 161 -------------VATRWYRAPELLYGARKYDPGVDLWAVGCIFAELLNGSPLFPGENDI 207

Query: 120 EHLAMMERVLG-PLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVPF 178
           E LA++ R LG P  +                    WP           +  LP      
Sbjct: 208 EQLAIVFRTLGTPNEE-------------------TWPG----------LTSLPD----- 233

Query: 179 FYG--SFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTA 236
            Y   +F E K   L                 +    ++ +   LL+GLL YDP+ RL+A
Sbjct: 234 -YNKITFPESKPIPLE----------------EIFPDASPEALDLLKGLLVYDPSKRLSA 276

Query: 237 REALRHPFFT 246
            EALRHP+FT
Sbjct: 277 AEALRHPYFT 286

Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of heart failure. Length = 286

>gnl|CDD|143346 cd07841, STKc_CDK7, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7

 Score = 89.6 bits (223), Expect = 3e-21
 Identities = 63/249 (25%), Positives = 94/249 (37%), Gaps = 83/249 (33%)

Query: 3   AVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG- 61
             +H   ++H DLKP N LL++S+ +                          +K+ DFG 
Sbjct: 116 EYLHSNWILHRDLKPNN-LLIASDGV--------------------------LKLADFGL 148

Query: 62  STTYERPDQNYI--VSTRHYRAPEVILGLG-WTYPCDIWSVGCILVELCTGEALFQTHEN 118
           + ++  P++     V TR YRAPE++ G   +    D+WSVGCI  EL           +
Sbjct: 149 ARSFGSPNRKMTHQVVTRWYRAPELLFGARHYGVGVDMWSVGCIFAELLLRVPFLPGDSD 208

Query: 119 LEHLAMMERVLG-PLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVP 177
           ++ L  +   LG P  +                   +WP           V  LP     
Sbjct: 209 IDQLGKIFEALGTPTEE-------------------NWPG----------VTSLPD---- 235

Query: 178 FFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAR 237
             Y  F  F    L                 Q    ++ D   LLQ LL  +P  R+TAR
Sbjct: 236 --YVEFKPFPPTPL----------------KQIFPAASDDALDLLQRLLTLNPNKRITAR 277

Query: 238 EALRHPFFT 246
           +AL HP+F+
Sbjct: 278 QALEHPYFS 286

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is also a component of the general transcription factor TFIIH, which phosphorylates the C-terminal domain (CTD) of RNA polymerase II when it is bound with unphosphorylated DNA, as present in the pre-initiation complex. Following phosphorylation, the CTD dissociates from the DNA which allows transcription initiation. Length = 298

>gnl|CDD|143385 cd07880, STKc_p38gamma_MAPK12, Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase

 Score = 87.3 bits (216), Expect = 5e-20
 Identities = 67/246 (27%), Positives = 100/246 (40%), Gaps = 75/246 (30%)

Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           +H   +IH DLKP N L V+ +                            +K++DFG   
Sbjct: 134 IHAAGIIHRDLKPGN-LAVNED--------------------------CELKILDFGLAR 166

Query: 65  YERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLA 123
               +    V TR YRAPEVIL  + +T   DIWSVGCI+ E+ TG+ LF+ H++L+ L 
Sbjct: 167 QTDSEMTGYVVTRWYRAPEVILNWMHYTQTVDIWSVGCIMAEMLTGKPLFKGHDHLDQLM 226

Query: 124 MMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVPFFYGSF 183
            + +V G   +  ++++                    S ++   V KLPR +   F    
Sbjct: 227 EIMKVTGTPSKEFVQKLQ-------------------SEDAKNYVKKLPRFRKKDF---- 263

Query: 184 VEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHP 243
                            S   N     V+        +L+ +L  D   R+TA EAL HP
Sbjct: 264 ----------------RSLLPNANPLAVN--------VLEKMLVLDAESRITAAEALAHP 299

Query: 244 FFTRDH 249
           +F   H
Sbjct: 300 YFEEFH 305

Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12, is predominantly expressed in skeletal muscle. Unlike p38alpha and p38beta, p38gamma is insensitive to pyridinylimidazoles. It displays an antagonizing function compared to p38alpha. p38gamma inhibits, while p38alpha stimulates, c-Jun phosphorylation and AP-1 mediated transcription. p38gamma also plays a role in the signaling between Ras and the estrogen receptor and has been implicated to increase cell invasion and breast cancer progression. In Xenopus, p38gamma is critical in the meiotic maturation of oocytes. Length = 343

>gnl|CDD|173749 cd07855, STKc_ERK5, Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5

 Score = 87.0 bits (216), Expect = 6e-20
 Identities = 67/251 (26%), Positives = 101/251 (40%), Gaps = 78/251 (31%)

Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDY---KSSLHTPKDSSYFKRMPKSSAIKVIDFG 61
           +H   +IH DLKP N+L+     +++ D+   +    +P +  YF  M            
Sbjct: 123 IHSANVIHRDLKPSNLLVNEDCELRIGDFGMARGLSSSPTEHKYF--M------------ 168

Query: 62  STTYERPDQNYIVSTRHYRAPEVILGLG-WTYPCDIWSVGCILVELCTGEALFQTHENLE 120
            T Y        V+TR YRAPE++L L  +T   D+WSVGCI  E+     LF     + 
Sbjct: 169 -TEY--------VATRWYRAPELLLSLPEYTTAIDMWSVGCIFAEMLGRRQLFPGKNYVH 219

Query: 121 HLAMMERVLGPLPQHMLKRV--DRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVPF 178
            L ++  VLG   + +L R+  DR     VR                K +  LPR Q   
Sbjct: 220 QLKLILSVLGSPSEEVLNRIGSDR-----VR----------------KYIQNLPRKQP-- 256

Query: 179 FYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTARE 238
                V +      F                       +   LL  +L++DP +R+T  +
Sbjct: 257 -----VPWSKI---FPKASP------------------EALDLLSQMLQFDPEERITVEQ 290

Query: 239 ALRHPFFTRDH 249
           AL+HPF  + H
Sbjct: 291 ALQHPFLAQYH 301

Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the MAP2K MEK5, which in turn is regulated by the MAP3Ks MEKK2 and MEKK3. Activated ERK5 phosphorylates its targets including myocyte enhancer factor 2 (MEF2), Sap1a, c-Myc, and RSK. It plays a role in EGF-induced cell proliferation during the G1/S phase transition. Studies on knockout mice revealed that ERK5 is essential for cardiovascular development and plays an important role in angiogenesis. It is also critical for neural differentiation and survival. The ERK5 pathway has been implicated in the pathogenesis of many diseases including cancer, cardiac hypertrophy, and atherosclerosis. Length = 334

>gnl|CDD|143338 cd07833, STKc_CDKL, Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases

 Score = 83.5 bits (207), Expect = 5e-19
 Identities = 45/142 (31%), Positives = 68/142 (47%), Gaps = 32/142 (22%)

Query: 6   HDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTY 65
           H   +IH D+KPEN +LVS                          +S  +K+ DFG    
Sbjct: 117 HSHNIIHRDIKPEN-ILVS--------------------------ESGVLKLCDFGFARA 149

Query: 66  --ERPDQNYI--VSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHENLE 120
              RP       V+TR YRAPE+++G   +  P D+W++GCI+ EL  GE LF    +++
Sbjct: 150 LRARPASPLTDYVATRWYRAPELLVGDTNYGKPVDVWAIGCIMAELLDGEPLFPGDSDID 209

Query: 121 HLAMMERVLGPLPQHMLKRVDR 142
            L ++++ LGPLP    +    
Sbjct: 210 QLYLIQKCLGPLPPSHQELFSS 231

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning and memory. Length = 288

>gnl|CDD|173745 cd07848, STKc_CDKL5, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5

 Score = 83.1 bits (205), Expect = 8e-19
 Identities = 64/238 (26%), Positives = 101/238 (42%), Gaps = 73/238 (30%)

Query: 10  MIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD 69
           ++H D+KPEN+L+  ++ +K+ D+                          F     E  +
Sbjct: 121 IVHRDIKPENLLISHNDVLKLCDF-------------------------GFARNLSEGSN 155

Query: 70  QNYI--VSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMER 127
            NY   V+TR YR+PE++LG  +    D+WSVGCIL EL  G+ LF     ++ L  +++
Sbjct: 156 ANYTEYVATRWYRSPELLLGAPYGKAVDMWSVGCILGELSDGQPLFPGESEIDQLFTIQK 215

Query: 128 VLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVPFFYGSFVEFK 187
           VLGPLP                             E +K     PR     F+G  + F 
Sbjct: 216 VLGPLPA----------------------------EQMKLFYSNPR-----FHG--LRFP 240

Query: 188 GYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFF 245
                        +  Q+L  +++   +G L  L++ LL+ +PTDR    + L HP F
Sbjct: 241 A-----------VNHPQSLERRYLGILSGVLLDLMKNLLKLNPTDRYLTEQCLNHPAF 287

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes cause a phenotype similar to Rett syndrome (RTT), a progressive neurodevelopmental disorder. These pathogenic mutations are located in the N-terminal portion of the protein within the kinase domain. Length = 287

>gnl|CDD|143341 cd07836, STKc_Pho85, Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85

 Score = 82.5 bits (204), Expect = 1e-18
 Identities = 61/242 (25%), Positives = 95/242 (39%), Gaps = 76/242 (31%)

Query: 6   HDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTY 65
           H+  ++H DLKP+N+L+     +K+ D+               + ++  I V  F +   
Sbjct: 117 HENRVLHRDLKPQNLLINKRGELKLADFG--------------LARAFGIPVNTFSNE-- 160

Query: 66  ERPDQNYIVSTRHYRAPEVILGLGWTYPC--DIWSVGCILVELCTGEALFQTHENLEHLA 123
                   V T  YRAP+V+LG   TY    DIWSVGCI+ E+ TG  LF    N + L 
Sbjct: 161 --------VVTLWYRAPDVLLG-SRTYSTSIDIWSVGCIMAEMITGRPLFPGTNNEDQLL 211

Query: 124 MMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVPFFYGSF 183
            + R++G   +                    WP           + +LP  +  F     
Sbjct: 212 KIFRIMGTPTEST------------------WP----------GISQLPEYKPTFPRYPP 243

Query: 184 VEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHP 243
            +                  Q L      H+      LL  LL+ +P  R++A +AL+HP
Sbjct: 244 QDL-----------------QQLF----PHADPLGIDLLHRLLQLNPELRISAHDALQHP 282

Query: 244 FF 245
           +F
Sbjct: 283 WF 284

Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment. It is not essential for yeast viability and is the functional homolog of mammalian CDK5, which plays a role in central nervous system development. Length = 284

>gnl|CDD|173748 cd07853, STKc_NLK, Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase

 Score = 83.6 bits (207), Expect = 1e-18
 Identities = 64/252 (25%), Positives = 97/252 (38%), Gaps = 78/252 (30%)

Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           +H   ++H D+KP N LLV+S  +                          +K+ DFG   
Sbjct: 119 LHSAGILHRDIKPGN-LLVNSNCV--------------------------LKICDFGLAR 151

Query: 65  YERPDQNYI----VSTRHYRAPEVILGLG-WTYPCDIWSVGCILVELCTGEALFQTHENL 119
            E PD++      V T++YRAPE+++G   +T   DIWSVGCI  EL     LFQ    +
Sbjct: 152 VEEPDESKHMTQEVVTQYYRAPEILMGSRHYTSAVDIWSVGCIFAELLGRRILFQAQSPI 211

Query: 120 EHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVPFF 179
           + L ++  +LG      ++     A  ++ R                   K P L V + 
Sbjct: 212 QQLDLITDLLGTPSLEAMRSACEGARAHILR----------------GPHKPPSLPVLY- 254

Query: 180 YGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREA 239
                                      +     H A    HLL  +L +DP  R++A +A
Sbjct: 255 --------------------------TLSSQATHEA---VHLLCRMLVFDPDKRISAADA 285

Query: 240 LRHPFFTRDHLR 251
           L HP+     LR
Sbjct: 286 LAHPYLDEGRLR 297

Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription factors from the TCF/LEF family, inhibiting their ability to activate the transcription of target genes. In prostate cancer cells, NLK is involved in regulating androgen receptor-mediated transcription and its expression is altered during cancer progression. Length = 372

>gnl|CDD|143384 cd07879, STKc_p38delta_MAPK13, Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase

 Score = 83.0 bits (205), Expect = 1e-18
 Identities = 73/243 (30%), Positives = 101/243 (41%), Gaps = 77/243 (31%)

Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           +H   +IH DLKP N L V+ +                            +K++DFG   
Sbjct: 133 IHSAGIIHRDLKPGN-LAVNED--------------------------CELKILDFGLAR 165

Query: 65  YERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLA 123
           +   +    V TR YRAPEVIL  + +    DIWSVGCI+ E+ TG+ LF+  + L+ L 
Sbjct: 166 HADAEMTGYVVTRWYRAPEVILNWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLT 225

Query: 124 MMERVLG-PLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVPFFYGS 182
            + +V G P P+ + K  D+ A+ Y                 IKS+ K PR         
Sbjct: 226 QILKVTGVPGPEFVQKLEDKAAKSY-----------------IKSLPKYPR--------- 259

Query: 183 FVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRH 242
               K +   F               Q VD        LL+ +L  D   RLTA EAL H
Sbjct: 260 ----KDFSTLF----------PKASPQAVD--------LLEKMLELDVDKRLTATEALEH 297

Query: 243 PFF 245
           P+F
Sbjct: 298 PYF 300

Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13, is found in skeletal muscle, heart, lung, testis, pancreas, and small intestine. It regulates microtubule function by phosphorylating Tau. It activates the c-jun promoter and plays a role in G2 cell cycle arrest. It also controls the degration of c-Myb, which is associated with myeloid leukemia and poor prognosis in colorectal cancer. p38delta is the main isoform involved in regulating the differentiation and apoptosis of keratinocytes. Length = 342

>gnl|CDD|173744 cd07847, STKc_CDKL1_4, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4

 Score = 82.0 bits (203), Expect = 2e-18
 Identities = 64/244 (26%), Positives = 99/244 (40%), Gaps = 78/244 (31%)

Query: 6   HDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG-STT 64
           H    IH D+KPEN+L+                            K   IK+ DFG +  
Sbjct: 117 HKHNCIHRDVKPENILIT---------------------------KQGQIKLCDFGFARI 149

Query: 65  YERPDQNYI--VSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHENLEH 121
              P  +Y   V+TR YRAPE+++G   +  P D+W++GC+  EL TG+ L+    +++ 
Sbjct: 150 LTGPGDDYTDYVATRWYRAPELLVGDTQYGPPVDVWAIGCVFAELLTGQPLWPGKSDVDQ 209

Query: 122 LAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVPFFYG 181
           L ++ + LG L                                      +PR Q  F   
Sbjct: 210 LYLIRKTLGDL--------------------------------------IPRHQQIFSTN 231

Query: 182 SFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALR 241
            F  FKG  +            + L  +  + S+  L+  L+G L+ DPT+RL+  E L 
Sbjct: 232 QF--FKGLSIP------EPETREPLESKFPNISSPALS-FLKGCLQMDPTERLSCEELLE 282

Query: 242 HPFF 245
           HP+F
Sbjct: 283 HPYF 286

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The function of CDKL4 is unknown. Length = 286

>gnl|CDD|173752 cd07861, STKc_CDK1_euk, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like

 Score = 81.3 bits (201), Expect = 3e-18
 Identities = 66/241 (27%), Positives = 102/241 (42%), Gaps = 74/241 (30%)

Query: 6   HDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTY 65
           H   ++H DLKP+N+L+ +   IK+ D+               + ++  I V  +   T+
Sbjct: 118 HSRRVLHRDLKPQNLLIDNKGVIKLADFG--------------LARAFGIPVRVY---TH 160

Query: 66  ERPDQNYIVSTRHYRAPEVILGLG-WTYPCDIWSVGCILVELCTGEALFQTHENLEHLAM 124
           E       V T  YRAPEV+LG   ++ P DIWS+G I  E+ T + LF     ++ L  
Sbjct: 161 E-------VVTLWYRAPEVLLGSPRYSTPVDIWSIGTIFAEMATKKPLFHGDSEIDQLFR 213

Query: 125 MERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVPFFYGSFV 184
           + R+LG  P                     WP           V  LP      +  +F 
Sbjct: 214 IFRILGT-PTE-----------------DVWPG----------VTSLPD-----YKNTFP 240

Query: 185 EFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPF 244
           ++K           + S  +NL     D    D   LL+ +L YDP  R++A++AL HP+
Sbjct: 241 KWKK--------GSLRSAVKNL-----DEDGLD---LLEKMLIYDPAKRISAKKALNHPY 284

Query: 245 F 245
           F
Sbjct: 285 F 285

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2 phase entry and progression. CDK1/cyclin A2 has also been implicated as an important regulator of S phase events. The CDK1/cyclin B complex is critical for G2 to M phase transition. It induces mitosis by activating nuclear enzymes that regulate chromatin condensation, nuclear membrane degradation, mitosis-specific microtubule and cytoskeletal reorganization. CDK1 also associates with cyclin E and plays a role in the entry into S phase. CDK1 transcription is stable throughout the cell cycle but is modulated in some pathological conditions. It may play a role in regulating apoptosis under these conditions. In breast cancer cells, HER2 can mediate apoptosis by inactivating CDK1. Activation of CDK1 may contribute to HIV-1 induced apoptosis and neuronal apoptosis in neurodegenerative diseases. Length = 285

>gnl|CDD|240233 PTZ00024, PTZ00024, cyclin-dependent protein kinase; Provisional

 Score = 82.1 bits (203), Expect = 3e-18
 Identities = 63/253 (24%), Positives = 97/253 (38%), Gaps = 69/253 (27%)

Query: 3   AVMHDLCMIHTDLKPENVLLVSSEYIKVPDY---KSSLHTPKDSSYFKRMPKSSAIKVID 59
            V+H    +H DL P N+ + S    K+ D+   +   + P   +  K        ++  
Sbjct: 133 NVLHKWYFMHRDLSPANIFINSKGICKIADFGLARRYGYPPYSDTLSKDETMQRREEM-- 190

Query: 60  FGSTTYERPDQNYIVSTRHYRAPEVILGLG-WTYPCDIWSVGCILVELCTGEALFQTHEN 118
               T +       V T  YRAPE+++G   + +  D+WSVGCI  EL TG+ LF     
Sbjct: 191 ----TSK-------VVTLWYRAPELLMGAEKYHFAVDMWSVGCIFAELLTGKPLFPGENE 239

Query: 119 LEHLAMMERVLG-PLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVP 177
           ++ L  +  +LG P                      +WP+            KLP L   
Sbjct: 240 IDQLGRIFELLGTPNED-------------------NWPQ----------AKKLP-LYTE 269

Query: 178 FFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAR 237
           F      + K         D I                     LLQ LL+ +P +R++A+
Sbjct: 270 FTPRKPKDLKTI-FPNASDDAI--------------------DLLQSLLKLNPLERISAK 308

Query: 238 EALRHPFFTRDHL 250
           EAL+H +F  D L
Sbjct: 309 EALKHEYFKSDPL 321

Length = 335

>gnl|CDD|173740 cd07842, STKc_CDK8_like, Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases

 Score = 81.6 bits (202), Expect = 3e-18
 Identities = 70/257 (27%), Positives = 98/257 (38%), Gaps = 80/257 (31%)

Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG-ST 63
           +H   ++H DLKP N+L++                          P+   +K+ D G + 
Sbjct: 124 LHSNWVLHRDLKPANILVMGEG-----------------------PERGVVKIGDLGLAR 160

Query: 64  TYERP-----DQNYIVSTRHYRAPEVILGLG-WTYPCDIWSVGCILVELCTGEALFQTHE 117
            +  P     D + +V T  YRAPE++LG   +T   DIW++GCI  EL T E +F+  E
Sbjct: 161 LFNAPLKPLADLDPVVVTIWYRAPELLLGARHYTKAIDIWAIGCIFAELLTLEPIFKGRE 220

Query: 118 ------NLEHLAMMER---VLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSV 168
                 N      +ER   VLG  P           EK       DWP+          +
Sbjct: 221 AKIKKSNPFQRDQLERIFEVLGT-PT----------EK-------DWPD----------I 252

Query: 169 MKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRY 228
            K+P             +    LA           Q                LL+ LL Y
Sbjct: 253 KKMPEYDTLMKDFKTKTYPSNSLAKWMEKHKKPDSQGF-------------DLLRKLLEY 299

Query: 229 DPTDRLTAREALRHPFF 245
           DPT R+TA EAL HP+F
Sbjct: 300 DPTKRITAEEALEHPYF 316

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA polymerase II (RNAP II)-dependent transcription. CDC2L6 also associates with Mediator in complexes lacking CDK8. In VP16-dependent transcriptional activation, CDK8 and CDC2L6 exerts opposing effects by positive and negative regulation, respectively, in similar conditions. Length = 316

>gnl|CDD|173747 cd07852, STKc_MAPK15, Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15

 Score = 81.9 bits (203), Expect = 4e-18
 Identities = 65/254 (25%), Positives = 95/254 (37%), Gaps = 83/254 (32%)

Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG--- 61
           +H   +IH DLKP N+LL                   +S           +K+ DFG   
Sbjct: 123 IHSGNVIHRDLKPSNILL-------------------NSDCR--------VKLADFGLAR 155

Query: 62  -----STTYERPDQNYIVSTRHYRAPEVILGLGW-TYPCDIWSVGCILVELCTGEALFQT 115
                    E P     V+TR YRAPE++LG    T   D+WSVGCIL E+  G+ LF  
Sbjct: 156 SLSELEENPENPVLTDYVATRWYRAPEILLGSTRYTKGVDMWSVGCILGEMLLGKPLFPG 215

Query: 116 HENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQ 175
              L  L  +  V+GP     ++ +               P  A   +S+ S  + P  +
Sbjct: 216 TSTLNQLEKIIEVIGPPSAEDIESIKS-------------PFAATMLDSLPSRPRKPLDE 262

Query: 176 VPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLT 235
           +                    D +     +L+ +           LL     ++P  RLT
Sbjct: 263 L---------LPKA-----SDDAL-----DLLKK-----------LLV----FNPNKRLT 288

Query: 236 AREALRHPFFTRDH 249
           A EAL HP+  + H
Sbjct: 289 AEEALEHPYVAQFH 302

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimuli whereas ERK8 shows low basal activity and is activated by DNA-damaging agents. ERK7 and ERK8 also have different substrate profiles. Genome analysis shows that they are orthologs with similar gene structures. ERK7 and ERK 8 may be involved in the signaling of some nuclear receptor transcription factors. ERK7 regulates hormone-dependent degradation of estrogen receptor alpha while ERK8 down-regulates the transcriptional co-activation androgen and glucocorticoid receptors. Length = 337

>gnl|CDD|143345 cd07840, STKc_CDK9_like, Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases

 Score = 81.1 bits (201), Expect = 4e-18
 Identities = 64/247 (25%), Positives = 92/247 (37%), Gaps = 81/247 (32%)

Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG-ST 63
           +H   ++H D+K  N+L+         +    L                  K+ DFG + 
Sbjct: 116 LHSNGILHRDIKGSNILI---------NNDGVL------------------KLADFGLAR 148

Query: 64  TYE---RPDQNYIVSTRHYRAPEVILGL-GWTYPCDIWSVGCILVELCTGEALFQTHENL 119
            Y      D    V T  YR PE++LG   +    D+WSVGCIL EL  G+ +FQ    L
Sbjct: 149 PYTKRNSADYTNRVITLWYRPPELLLGATRYGPEVDMWSVGCILAELFLGKPIFQGSTEL 208

Query: 120 EHLAMMERVLG-PLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVPF 178
           E L  +  + G P  +                   +WP           V KLP      
Sbjct: 209 EQLEKIFELCGSPTDE-------------------NWPG----------VSKLP------ 233

Query: 179 FYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTARE 238
           ++ +    K Y    R  +              D SA D   LL  LL  DP  R++A +
Sbjct: 234 WFENLKPKKPYKRRLR--EFFKHLI--------DPSALD---LLDKLLTLDPKKRISADQ 280

Query: 239 ALRHPFF 245
           AL+H +F
Sbjct: 281 ALQHEYF 287

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA polymerase II and participate in regulating mutliple steps of gene expression including transcription elongation and RNA processing. CDK9 and CdkC associate with T-type cyclins while BUR1 associates with the cyclin BUR2. CDK12 is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 interacts with cyclins L1 and L2, and participates in regulating transcription and alternative splicing. Length = 287

>gnl|CDD|143382 cd07877, STKc_p38alpha_MAPK14, Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase

 Score = 80.9 bits (199), Expect = 1e-17
 Identities = 60/246 (24%), Positives = 102/246 (41%), Gaps = 75/246 (30%)

Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           +H   +IH DLKP N+ +                            +   +K++DFG   
Sbjct: 136 IHSADIIHRDLKPSNLAV---------------------------NEDCELKILDFGLAR 168

Query: 65  YERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLA 123
           +   +    V+TR YRAPE++L  + +    DIWSVGCI+ EL TG  LF   ++++ L 
Sbjct: 169 HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLK 228

Query: 124 MMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVPFFYGSF 183
           ++ R++G     +LK++                   ++R  I+S+ ++P++    F   F
Sbjct: 229 LILRLVGTPGAELLKKISSE----------------SARNYIQSLTQMPKMN---FANVF 269

Query: 184 VEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHP 243
           +                          VD        LL+ +L  D   R+TA +AL H 
Sbjct: 270 IGANP--------------------LAVD--------LLEKMLVLDSDKRITAAQALAHA 301

Query: 244 FFTRDH 249
           +F + H
Sbjct: 302 YFAQYH 307

Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14, is expressed in most tissues and is the major isoform involved in the immune and inflammatory response. It is the central p38 MAPK involved in myogenesis. It plays a role in regulating cell cycle check-point transition and promoting cell differentiation. p38alpha also regulates cell proliferation and death through crosstalk with the JNK pathway. Its substrates include MAPK activated protein kinase 2 (MK2), MK5, and the transcription factors ATF2 and Mitf. Length = 345

>gnl|CDD|143361 cd07856, STKc_Sty1_Hog1, Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1

 Score = 80.3 bits (198), Expect = 1e-17
 Identities = 62/247 (25%), Positives = 99/247 (40%), Gaps = 77/247 (31%)

Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           +H   ++H DLKP N+L+                            ++  +K+ DFG   
Sbjct: 124 VHSAGVVHRDLKPSNILI---------------------------NENCDLKICDFGLAR 156

Query: 65  YERPDQNYIVSTRHYRAPEVILGL-GWTYPCDIWSVGCILVELCTGEALFQTHENLEHLA 123
            + P     VSTR+YRAPE++L    +    DIWS GCI  E+  G+ LF   +++   +
Sbjct: 157 IQDPQMTGYVSTRYYRAPEIMLTWQKYDVEVDIWSAGCIFAEMLEGKPLFPGKDHVNQFS 216

Query: 124 MMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLP-RLQVPFFYGS 182
           ++  +LG  P  ++  +                    S  +++ V  LP R  VPF    
Sbjct: 217 IITDLLGTPPDDVINTI-------------------CSENTLRFVQSLPKREPVPF---- 253

Query: 183 FVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRH 242
                                     ++ D SA D   LL+ +L +DP  R++A EAL H
Sbjct: 254 ---------------------SEKF-KNADPSAID---LLEKMLVFDPQKRISAAEALAH 288

Query: 243 PFFTRDH 249
           P+    H
Sbjct: 289 PYLAPYH 295

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and UV radiation. Sty1 is regulated by the MAP2K Wis1, which is activated by the MAP3Ks Wis4 and Win1, which receive signals of the stress condition from membrane-spanning histidine kinases Mak1-3. Activated Sty1 stabilizes the Atf1 transcription factor and induces transcription of Atf1-dependent genes of the core environmetal stress response (CESR). Hog1 is the key element in the high osmolarity glycerol (HOG) pathway and is activated upon hyperosmotic stress. Activated Hog1 accumulates in the nucleus and regulates stress-induced transcription. The HOG pathway is mediated by two transmembrane osmosensors, Sln1 and Sho1. Length = 328

>gnl|CDD|143356 cd07851, STKc_p38, Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase

 Score = 79.3 bits (196), Expect = 3e-17
 Identities = 65/247 (26%), Positives = 102/247 (41%), Gaps = 77/247 (31%)

Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           +H   +IH DLKP N+ +     +K+ D+  + HT  +      M             T 
Sbjct: 134 IHSAGIIHRDLKPSNIAVNEDCELKILDFGLARHTDDE------M-------------TG 174

Query: 65  YERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLA 123
           Y        V+TR YRAPE++L  + +    DIWSVGCI+ EL TG+ LF   ++++ L 
Sbjct: 175 Y--------VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGKTLFPGSDHIDQLK 226

Query: 124 MMERVLG-PLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVPFFYGS 182
            +  ++G P  + + K     A  Y++                     LP++        
Sbjct: 227 RIMNLVGTPDEELLQKISSESARNYIQ--------------------SLPQMPKK----- 261

Query: 183 FVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRH 242
             +FK     F   + +A          +D        LL+ +L  DP  R+TA EAL H
Sbjct: 262 --DFKEV---FSGANPLA----------ID--------LLEKMLVLDPDKRITAAEALAH 298

Query: 243 PFFTRDH 249
           P+    H
Sbjct: 299 PYLAEYH 305

Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. p38 substrates include other protein kinases and factors that regulate transcription, nuclear export, mRNA stability and translation. p38 kinases are drug targets for the inflammatory diseases psoriasis, rheumatoid arthritis, and chronic pulmonary disease. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta, which show varying substrate specificity and expression patterns. p38alpha and p38beta are ubiquitously expressed, p38gamma is predominantly found in skeletal muscle, and p38delta is found in the heart, lung, testis, pancreas, and small intestine. Length = 343

>gnl|CDD|173746 cd07850, STKc_JNK, Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase

 Score = 78.6 bits (194), Expect = 7e-17
 Identities = 46/150 (30%), Positives = 70/150 (46%), Gaps = 35/150 (23%)

Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG--- 61
           +H   +IH DLKP N+++ S                 D +          +K++DFG   
Sbjct: 134 LHSAGIIHRDLKPSNIVVKS-----------------DCT----------LKILDFGLAR 166

Query: 62  --STTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENL 119
              T++      Y+V TR+YRAPEVILG+G+    DIWSVGCI+ E+  G  LF   +++
Sbjct: 167 TAGTSFMMTP--YVV-TRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGTVLFPGTDHI 223

Query: 120 EHLAMMERVLGPLPQHMLKRVDRHAEKYVR 149
           +    +   LG      + R+      YV 
Sbjct: 224 DQWNKIIEQLGTPSDEFMSRLQPTVRNYVE 253

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3) that are alternatively spliced to produce at least 10 isoforms. JNKs are specifically activated by the MAPK kinases MKK4 and MKK7, which are in turn activated by upstream MAPK kinase kinases as a result of different stimuli including stresses such as ultraviolet (UV) irradiation, hyperosmolarity, heat shock, or cytokines. JNKs activate a large number of different substrates based on specific stimulus, cell type, and cellular condition, and may be implicated in seemingly contradictory functions. Length = 353

>gnl|CDD|173663 cd05572, STKc_cGK_PKG, Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase

 Score = 76.9 bits (190), Expect = 1e-16
 Identities = 39/150 (26%), Positives = 69/150 (46%), Gaps = 27/150 (18%)

Query: 2   FAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG 61
           F  +H+  +I+ DLKPEN+LL S+ Y+K+ D+  +                   K +  G
Sbjct: 106 FEYLHNRGIIYRDLKPENLLLDSNGYVKLVDFGFA-------------------KKLKSG 146

Query: 62  STTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEH 121
             T+          T  Y APE+IL  G+ +  D WS+G +L EL TG   F   ++ + 
Sbjct: 147 QKTWT------FCGTPEYVAPEIILNKGYDFSVDYWSLGILLYELLTGRPPFGE-DDEDP 199

Query: 122 LAMMERVLGPLPQHML-KRVDRHAEKYVRR 150
           + +   +L    +      +D+ A+  +++
Sbjct: 200 MEIYNDILKGNGKLEFPNYIDKAAKDLIKQ 229

Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowing autophosphorylation and activation of the kinase. cGKI is a soluble protein expressed in all smooth muscles, platelets, cerebellum, and kidney. It is also expressed at lower concentrations in other tissues. cGKII is a membrane-bound protein that is most abundantly expressed in the intestine. It is also present in the brain nuclei, adrenal cortex, kidney, lung, and prostate. cGKI is involved in the regulation of smooth muscle tone, smooth cell proliferation, and platelet activation. cGKII plays a role in the regulation of secretion, such as renin secretion by the kidney and aldosterone secretion by the adrenal. It also regulates bone growth and the circadian rhythm. Length = 262

>gnl|CDD|173738 cd07835, STKc_CDK1_like, Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases

 Score = 76.2 bits (188), Expect = 2e-16
 Identities = 63/240 (26%), Positives = 93/240 (38%), Gaps = 82/240 (34%)

Query: 11  IHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG-STTYERPD 69
           +H DLKP+N+L+                            +  A+K+ DFG +  +  P 
Sbjct: 121 LHRDLKPQNLLI---------------------------DREGALKLADFGLARAFGVPV 153

Query: 70  QNYI--VSTRHYRAPEVILGLGWTY--PCDIWSVGCILVELCTGEALFQTHENLEHLAMM 125
           + Y   V T  YRAPE++LG    Y  P DIWS+GCI  E+     LF     ++ L  +
Sbjct: 154 RTYTHEVVTLWYRAPEILLG-SRQYSTPVDIWSIGCIFAEMVNRRPLFPGDSEIDQLFRI 212

Query: 126 ERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVPFFYGSFVE 185
            R LG   + +                  WP           V  LP      +  +F +
Sbjct: 213 FRTLGTPDEDV------------------WPG----------VTSLPD-----YKPTFPK 239

Query: 186 FKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFF 245
           +    L        +    NL     D    D   LL  +L YDP  R++A+ AL+HP+F
Sbjct: 240 WARQDL--------SKVVPNL-----DEDGLD---LLSKMLVYDPAKRISAKAALQHPYF 283

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2 phase entry and progression while the CDK1/cyclin B complex is critical for G2 to M phase transition. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex plays a role in regulating DNA replication. Studies in knockout mice revealed that CDK1 can compensate for the loss of the cdk2 gene as it can also bind cyclin E and drive G1 to S phase transition. CDK3 is regulated by cyclin C and it phosphorylates pRB specifically during the G0/G1 transition. This phosphorylation is required for cells to exit G0 efficiently and enter the G1 phase. Length = 283

>gnl|CDD|173623 cd00180, PKc, Catalytic domain of Protein Kinases

 Score = 74.6 bits (184), Expect = 3e-16
 Identities = 37/106 (34%), Positives = 49/106 (46%), Gaps = 30/106 (28%)

Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           +H   +IH DLKPEN+LL S                              +K+ DFG + 
Sbjct: 108 LHSNGIIHRDLKPENILLDSDNGK--------------------------VKLADFGLSK 141

Query: 65  YERPDQNY---IVSTRHYRAPEVILGLG-WTYPCDIWSVGCILVEL 106
               D++    IV T  Y APEV+LG G ++   DIWS+G IL EL
Sbjct: 142 LLTSDKSLLKTIVGTPAYMAPEVLLGKGYYSEKSDIWSLGVILYEL 187

Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which one kinase activates a second kinase, which in turn, may act on other kinases; this sequential action transmits a signal from the cell surface to target proteins, which results in cellular responses. The PK family is one of the largest known protein families with more than 100 homologous yeast enzymes and 550 human proteins. A fraction of PK family members are pseudokinases that lack crucial residues for catalytic activity. The mutiplicity of kinases allows for specific regulation according to substrate, tissue distribution, and cellular localization. PKs regulate many cellular processes including proliferation, division, differentiation, motility, survival, metabolism, cell-cycle progression, cytoskeletal rearrangement, immunity, and neuronal functions. Many kinases are implicated in the development of various human diseases including different types of cancer. Length = 215

>gnl|CDD|173751 cd07860, STKc_CDK2_3, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3

 Score = 74.1 bits (182), Expect = 1e-15
 Identities = 68/247 (27%), Positives = 100/247 (40%), Gaps = 80/247 (32%)

Query: 3   AVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG- 61
           A  H   ++H DLKP+N LL+++E                           AIK+ DFG 
Sbjct: 114 AFCHSHRVLHRDLKPQN-LLINTE--------------------------GAIKLADFGL 146

Query: 62  STTYERPDQNYI--VSTRHYRAPEVILGLG-WTYPCDIWSVGCILVELCTGEALFQTHEN 118
           +  +  P + Y   V T  YRAPE++LG   ++   DIWS+GCI  E+ T  ALF     
Sbjct: 147 ARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSE 206

Query: 119 LEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVPF 178
           ++ L  + R LG  P  ++                 WP           V  LP      
Sbjct: 207 IDQLFRIFRTLGT-PDEVV-----------------WP----------GVTSLPD----- 233

Query: 179 FYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTARE 238
           +  SF ++                  + ++  +D    D   LL  +L YDP  R++A+ 
Sbjct: 234 YKPSFPKWARQDF-------------SKVVPPLDEDGRD---LLSQMLHYDPNKRISAKA 277

Query: 239 ALRHPFF 245
           AL HPFF
Sbjct: 278 ALAHPFF 284

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex plays a role in regulating DNA replication. CDK2, together with CDK4, also regulates embryonic cell proliferation. Despite these important roles, mice deleted for the cdk2 gene are viable and normal except for being sterile. This may be due to compensation provided by CDK1 (also called Cdc2), which can also bind cyclin E and drive the G1 to S phase transition. CDK3 is regulated by cyclin C and it phosphorylates pRB specifically during the G0/G1 transition. This phosphorylation is required for cells to exit G0 efficiently and enter the G1 phase. Length = 284

>gnl|CDD|173750 cd07857, STKc_MPK1, Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1

 Score = 74.7 bits (184), Expect = 1e-15
 Identities = 66/253 (26%), Positives = 107/253 (42%), Gaps = 82/253 (32%)

Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG-ST 63
           +H   ++H DLKP N LLV+++                            +K+ DFG + 
Sbjct: 121 IHSANVLHRDLKPGN-LLVNAD--------------------------CELKICDFGLAR 153

Query: 64  TY-ERPDQN--YI---VSTRHYRAPEVILGL-GWTYPCDIWSVGCILVELCTGEALFQTH 116
            + E P +N  ++   V+TR YRAPE++L    +T   D+WSVGCIL EL   + +F+  
Sbjct: 154 GFSENPGENAGFMTEYVATRWYRAPEIMLSFQSYTKAIDVWSVGCILAELLGRKPVFKGK 213

Query: 117 ENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQV 176
           + ++ L  + +VLG   +  L R+                    ++  I+S+  +P+   
Sbjct: 214 DYVDQLNQILQVLGTPDEETLSRI----------------GSPKAQNYIRSLPNIPK--K 255

Query: 177 PFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTA 236
           PF                            I  + +  A D   LL+ LL +DPT R++ 
Sbjct: 256 PF--------------------------ESIFPNANPLALD---LLEKLLAFDPTKRISV 286

Query: 237 REALRHPFFTRDH 249
            EAL HP+    H
Sbjct: 287 EEALEHPYLAIWH 299

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall construction, morphogenesis, and ion homeostasis. MPK1 is activated in response to cell wall stress including heat stimulation, osmotic shock, UV irradiation, and any agents that interfere with cell wall biogenesis such as chitin antagonists, caffeine, or zymolase. MPK1 is regulated by the MAP2Ks Mkk1/2, which are regulated by the MAP3K Bck1. Pmk1 is also activated by multiple stresses including elevated temperatures, hyper- or hypotonic stress, glucose deprivation, exposure to cell-wall damaging compounds, and oxidative stress. It is regulated by the MAP2K Pek1, which is regulated by the MAP3K Mkh1. Length = 332

>gnl|CDD|143383 cd07878, STKc_p38beta_MAPK11, Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase

 Score = 74.7 bits (183), Expect = 1e-15
 Identities = 66/247 (26%), Positives = 104/247 (42%), Gaps = 77/247 (31%)

Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           +H   +IH DLKP NV +                            +   ++++DFG   
Sbjct: 134 IHSAGIIHRDLKPSNVAV---------------------------NEDCELRILDFGLAR 166

Query: 65  YERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLA 123
               +    V+TR YRAPE++L  + +    DIWSVGCI+ EL  G+ALF  ++ ++ L 
Sbjct: 167 QADDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLKGKALFPGNDYIDQLK 226

Query: 124 -MMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVPFFYGS 182
            +ME V  P P+ + K    HA KY                 I+S+  +P+         
Sbjct: 227 RIMEVVGTPSPEVLKKISSEHARKY-----------------IQSLPHMPQ--------- 260

Query: 183 FVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRH 242
               +     FR  + +A          +D        LL+ +L  D   R++A EAL H
Sbjct: 261 ----QDLKKIFRGANPLA----------ID--------LLEKMLVLDSDKRISASEALAH 298

Query: 243 PFFTRDH 249
           P+F++ H
Sbjct: 299 PYFSQYH 305

Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is widely expressed in tissues and shows more similarity with p38alpha than with the other isoforms. Both are sensitive to pyridinylimidazoles and share some common substrates such as MAPK activated protein kinase 2 (MK2) and the transcription factors ATF2, c-Fos and, ELK-1. p38beta is involved in regulating the activation of the cyclooxygenase-2 promoter and the expression of TGFbeta-induced alpha-smooth muscle cell actin. Length = 343

>gnl|CDD|173741 cd07843, STKc_CDC2L1, Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1

 Score = 74.2 bits (183), Expect = 1e-15
 Identities = 40/132 (30%), Positives = 61/132 (46%), Gaps = 31/132 (23%)

Query: 3   AVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG- 61
           A +HD  ++H DLK  N+L                           +     +K+ DFG 
Sbjct: 120 AHLHDNWILHRDLKTSNLL---------------------------LNNRGILKICDFGL 152

Query: 62  STTYERPDQNY--IVSTRHYRAPEVILGLG-WTYPCDIWSVGCILVELCTGEALFQTHEN 118
           +  Y  P + Y  +V T  YRAPE++LG   ++   D+WSVGCI  EL T + LF     
Sbjct: 153 AREYGSPLKPYTQLVVTLWYRAPELLLGAKEYSTAIDMWSVGCIFAELLTKKPLFPGKSE 212

Query: 119 LEHLAMMERVLG 130
           ++ L  + ++LG
Sbjct: 213 IDQLNKIFKLLG 224

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the major isoform, associates with cyclin L and is expressed throughout the cell cycle. It is involved in RNA processing and the regulation of transcription. CDK11(p58) associates with cyclin D3 and is expressed during the G2/M phase of the cell cycle. It plays roles in spindle morphogenesis, centrosome maturation, sister chromatid cohesion, and the completion of mitosis. CDK11(p46) is formed from the larger isoforms by caspases during TNFalpha- and Fas-induced apoptosis. It functions as a downstream effector kinase in apoptotic signaling pathways and interacts with eukaryotic initiation factor 3f (eIF3f), p21-activated kinase (PAK1), and Ran-binding protein (RanBPM). Length = 293

>gnl|CDD|173670 cd05579, STKc_MAST_like, Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins

 Score = 73.4 bits (181), Expect = 1e-15
 Identities = 36/110 (32%), Positives = 52/110 (47%), Gaps = 16/110 (14%)

Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           +H   +IH DLKP+N+L+ S+ ++K+ D+   L      S    + +   +   +     
Sbjct: 109 LHSNGIIHRDLKPDNILIDSNGHLKLTDF--GL------SKVGLVRRQINLNDDEKEDKR 160

Query: 65  YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQ 114
                   IV T  Y APEVILG G +   D WS+GCIL E   G   F 
Sbjct: 161 --------IVGTPDYIAPEVILGQGHSKTVDWWSLGCILYEFLVGIPPFH 202

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert relative to other kinases. The fungal kinases in this subfamily harbor other domains in addition to a central catalytic domain, which also contains an insert relative to MAST kinases like MASTL. Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. MAST kinases are cytoskeletal associated kinases of unknown function that are also expressed at neuromuscular junctions and postsynaptic densities. The fungal proteins Rim15 and cek1 are involved in the regulation of meiosis and mitosis, respectively. Length = 265

>gnl|CDD|143354 cd07849, STKc_ERK1_2_like, Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases

 Score = 74.3 bits (183), Expect = 2e-15
 Identities = 66/242 (27%), Positives = 100/242 (41%), Gaps = 71/242 (29%)

Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           +H   ++H DLKP N+LL ++  +K+ D+  +     +  +   +             T 
Sbjct: 122 IHSANVLHRDLKPSNLLLNTNCDLKICDFGLARIADPEHDHTGFL-------------TE 168

Query: 65  YERPDQNYIVSTRHYRAPEVILGL-GWTYPCDIWSVGCILVELCTGEALFQTHENLEHLA 123
           Y        V+TR YRAPE++L   G+T   DIWSVGCIL E+ +   LF   + L  L 
Sbjct: 169 Y--------VATRWYRAPEIMLNSKGYTKAIDIWSVGCILAEMLSNRPLFPGKDYLHQLN 220

Query: 124 MMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLP-RLQVPFFYGS 182
           ++  VLG   Q  L  +                    +R  IKS   LP + +VP+    
Sbjct: 221 LILGVLGTPSQEDLNCI----------------ISLRARNYIKS---LPFKPKVPW---- 257

Query: 183 FVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRH 242
                                 N +  + D  A D   LL  +L ++P  R+T  EAL H
Sbjct: 258 ----------------------NKLFPNADPKALD---LLDKMLTFNPHKRITVEEALAH 292

Query: 243 PF 244
           P+
Sbjct: 293 PY 294

Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase kinase from the Raf family. ERK1/2 have numerous substrates, many of which are nuclear and participate in transcriptional regulation of many cellular processes. They regulate cell growth, cell proliferation, and cell cycle progression from G1 to S phase. Although the distinct roles of ERK1 and ERK2 have not been fully determined, it is known that ERK2 can maintain most functions in the absence of ERK1, and that the deletion of ERK2 is embryonically lethal. The MAPK, Fus3, regulates yeast mating processes including mating-specific gene expression, G1 arrest, mating projection, and cell fusion. Length = 336

>gnl|CDD|143381 cd07876, STKc_JNK2, Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2

 Score = 74.3 bits (182), Expect = 2e-15
 Identities = 61/242 (25%), Positives = 96/242 (39%), Gaps = 61/242 (25%)

Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           +H   +IH DLKP N+++ S   +K+ D+               + +++     +F  T 
Sbjct: 139 LHSAGIIHRDLKPSNIVVKSDCTLKILDFG--------------LARTACT---NFMMTP 181

Query: 65  YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAM 124
           Y        V TR+YRAPEVILG+G+    DIWSVGCI+ EL  G  +FQ  ++++    
Sbjct: 182 Y--------VVTRYYRAPEVILGMGYKENVDIWSVGCIMGELVKGSVIFQGTDHIDQWNK 233

Query: 125 MERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVPFFYGSFV 184
           +   LG      + R+      YV                            P + G   
Sbjct: 234 VIEQLGTPSAEFMNRLQPTVRNYV-------------------------ENRPQYPG--- 265

Query: 185 EFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPF 244
                 ++F   +    +      +           LL  +L  DP  R++  EALRHP+
Sbjct: 266 ------ISF--EELFPDWIFPSESERDKLKTSQARDLLSKMLVIDPDKRISVDEALRHPY 317

Query: 245 FT 246
            T
Sbjct: 318 IT 319

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jnk1 or Jnk2) could survive but disruption of both genes resulted in lethality. However, recent studies have shown that JNK1 and JNK2 perform distinct functions through specific binding partners and substrates. JNK2 is specifically translocated to the mitochondria during dopaminergic cell death. Specific substrates include the microtubule-associated proteins DCX and Tau, as well as TIF-IA which is involved in ribosomal RNA synthesis regulation. Mice deficient in Jnk2 show protection against arthritis, type 1 diabetes, atherosclerosis, abdominal aortic aneurysm, cardiac cell death, TNF-induced liver damage, and tumor growth, indicating that JNK2 may play roles in the pathogenesis of these diseases. Length = 359

>gnl|CDD|143364 cd07859, STKc_TDY_MAPK_plant, Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants

 Score = 73.7 bits (181), Expect = 3e-15
 Identities = 64/244 (26%), Positives = 95/244 (38%), Gaps = 72/244 (29%)

Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           +H   + H DLKP+N+L  +   +K+ D+  +     D+         +AI   D+    
Sbjct: 119 IHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTP--------TAIFWTDY---- 166

Query: 65  YERPDQNYIVSTRHYRAPEVILGL--GWTYPCDIWSVGCILVELCTGEALFQTHENLEHL 122
                    V+TR YRAPE+       +T   DIWS+GCI  E+ TG+ LF     +  L
Sbjct: 167 ---------VATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQL 217

Query: 123 AMMERVLGPLPQHMLKRV-DRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVPFFYG 181
            ++  +LG      + RV +  A +Y+   R                    +  VPF   
Sbjct: 218 DLITDLLGTPSPETISRVRNEKARRYLSSMR-------------------KKQPVPF--- 255

Query: 182 SFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALR 241
                      F   D +A                    LL+ LL +DP DR TA EAL 
Sbjct: 256 --------SQKFPNADPLA------------------LRLLERLLAFDPKDRPTAEEALA 289

Query: 242 HPFF 245
            P+F
Sbjct: 290 DPYF 293

Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activation loop, TEY and TDY. Arabidopsis thaliana contains more TEY-type MAPKs than TDY-type, whereas the reverse is true for Oryza sativa. This subfamily represents the TDY subtype and is composed of Group D plant MAPKs including Arabidopsis thaliana MPK18 (AtMPK18), Oryza sativa Blast- and Wound-induced MAPK1 (OsBWMK1), OsWJUMK1 (Wound- and JA-Uninducible MAPK1), Zea mays MPK6, and the Medicago sativa TDY1 gene product. OsBWMK1 enhances resistance to pathogenic infections. It mediates stress-activated defense responses by activating a transcription factor that affects the expression of stress-related genes. AtMPK18 is involved in microtubule-related functions. Length = 338

>gnl|CDD|173660 cd05123, STKc_AGC, Catalytic domain of AGC family Protein Serine/Threonine Kinases

 Score = 72.2 bits (178), Expect = 4e-15
 Identities = 39/125 (31%), Positives = 59/125 (47%), Gaps = 27/125 (21%)

Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           +H L +I+ DLKPEN+LL +  +IK+ D+                    A ++   GS T
Sbjct: 109 LHSLGIIYRDLKPENILLDADGHIKLTDF------------------GLAKELSSEGSRT 150

Query: 65  YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAM 124
                      T  Y APEV+LG G+    D WS+G +L E+ TG+  F   +  E   +
Sbjct: 151 NT------FCGTPEYLAPEVLLGKGYGKAVDWWSLGVLLYEMLTGKPPFYAEDRKE---I 201

Query: 125 MERVL 129
            E++L
Sbjct: 202 YEKIL 206

Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the turn motif. Phosphorylation at the A-loop is required of most AGC kinases, which results in a disorder-to-order transition of the A-loop. The ordered conformation results in the access of substrates and ATP to the active site. A subset of AGC kinases with C-terminal extensions containing the HM also requires phosphorylation at this site. Phosphorylation at the HM allows the C-terminal extension to form an ordered structure that packs into the hydrophobic pocket of the catalytic domain, which then reconfigures the kinase into an active bi-lobed state. In addition, growth factor-activated AGC kinases such as PKB, p70S6K, RSK, MSK, PKC, and SGK, require phosphorylation at the turn motif (also called tail or zipper site), located N-terminal to the HM at the C-terminal extension. AGC kinases regulate many cellular processes including division, growth, survival, metabolism, motility, and differentiation. Many are implicated in the development of various human diseases. Length = 250

>gnl|CDD|143371 cd07866, STKc_BUR1, Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins

 Score = 72.7 bits (179), Expect = 6e-15
 Identities = 55/242 (22%), Positives = 90/242 (37%), Gaps = 62/242 (25%)

Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           +H+  ++H D+K  N+L+ +   +K+ D+   L  P D       PK         G   
Sbjct: 131 LHENHILHRDIKAANILIDNQGILKIADF--GLARPYDGP--PPNPKG--------GGGG 178

Query: 65  YERPDQNYIVSTRHYRAPEVILGL-GWTYPCDIWSVGCILVELCTGEALFQTHENLEHLA 123
             R   N +V TR YR PE++LG   +T   DIW +GC+  E+ T   + Q   +++ L 
Sbjct: 179 GTRKYTNLVV-TRWYRPPELLLGERRYTTAVDIWGIGCVFAEMFTRRPILQGKSDIDQLH 237

Query: 124 MMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVPFFYGSF 183
           ++ ++ G   +                    WP              LP  +    + + 
Sbjct: 238 LIFKLCGTPTEE------------------TWPGWR----------SLPGCEGVHSFTN- 268

Query: 184 VEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHP 243
                                  + +       +   LL  LL  DP  RLTA +AL HP
Sbjct: 269 -------------------YPRTLEERFGKLGPEGLDLLSKLLSLDPYKRLTASDALEHP 309

Query: 244 FF 245
           +F
Sbjct: 310 YF 311

Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic screen as factors involved in general transcription. The BUR1/BUR2 complex phosphorylates the C-terminal domain of RNA polymerase II. In addition, this complex regulates histone modification by phosporylating Rad6 and mediating the association of the Paf1 complex with chromatin. Length = 311

>gnl|CDD|143363 cd07858, STKc_TEY_MAPK_plant, Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants

 Score = 72.0 bits (177), Expect = 1e-14
 Identities = 65/251 (25%), Positives = 100/251 (39%), Gaps = 82/251 (32%)

Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG--S 62
           +H   ++H DLKP N+LL ++                             +K+ DFG   
Sbjct: 124 IHSANVLHRDLKPSNLLLNAN---------------------------CDLKICDFGLAR 156

Query: 63  TTYERPDQ--NYIVSTRHYRAPEVILGL-GWTYPCDIWSVGCILVELCTGEALFQTHENL 119
           TT E+ D    Y+V TR YRAPE++L    +T   D+WSVGCI  EL   + LF   + +
Sbjct: 157 TTSEKGDFMTEYVV-TRWYRAPELLLNCSEYTTAIDVWSVGCIFAELLGRKPLFPGKDYV 215

Query: 120 EHLAMMERVLGPLPQHMLKRVDR-HAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVPF 178
             L ++  +LG   +  L  +    A +Y+R                          +P+
Sbjct: 216 HQLKLITELLGSPSEEDLGFIRNEKARRYIR-------------------------SLPY 250

Query: 179 FYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTARE 238
                                 SF +  +  H +  A D   LL+ +L +DP+ R+T  E
Sbjct: 251 TPR------------------QSFAR--LFPHANPLAID---LLEKMLVFDPSKRITVEE 287

Query: 239 ALRHPFFTRDH 249
           AL HP+    H
Sbjct: 288 ALAHPYLASLH 298

Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activation loop, TEY and TDY. This subfamily represents the TEY subtype and is further subdivided into three groups (A, B, and C). Group A is represented by AtMPK3, AtMPK6, Nicotiana tabacum BTF4 (NtNTF4), among others. They are mostly involved in environmental and hormonal responses. AtMPK3 and AtMPK6 are also key regulators for stomatal development and patterning. Group B is represented by AtMPK4, AtMPK13, and NtNTF6, among others. They may be involved in both cell division and environmental stress response. AtMPK4 also participates in regulating innate immunity. Group C is represented by AtMPK1, AtMPK2, NtNTF3, Oryza sativa MAPK4 (OsMAPK4), among others. They may also be involved in stress responses. AtMPK1 and AtMPK2 are activated following mechanical injury and in the presence of stress chemicals such as jasmonic acid, hydrogen peroxide and abscisic acid. OsMAPK4 is also called OsMSRMK3 for Multiple Stress-Responsive MAPK3. Length = 337

>gnl|CDD|132957 cd06626, STKc_MEKK4, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4

 Score = 71.2 bits (175), Expect = 1e-14
 Identities = 36/140 (25%), Positives = 58/140 (41%), Gaps = 29/140 (20%)

Query: 3   AVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGS 62
           A +H   ++H D+KP N+ L  +  IK+ D+  +                     +   +
Sbjct: 113 AYLHSHGIVHRDIKPANIFLDHNGVIKLGDFGCA-------------------VKLKNNT 153

Query: 63  TTYERPDQNYIVSTRHYRAPEVILG---LGWTYPCDIWSVGCILVELCTG----EALFQT 115
           TT     Q+    T  Y APEVI G    G     DIWS+GC+++E+ TG      L   
Sbjct: 154 TTMGEEVQSL-AGTPAYMAPEVITGGKGKGHGRAADIWSLGCVVLEMATGKRPWSELDNE 212

Query: 116 HENLEHLAMMERVLGPLPQH 135
            + + H+    +   P+P  
Sbjct: 213 FQIMFHVGAGHK--PPIPDS 230

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4/MKK7 and MKK3/MKK6. JNK and p38 are collectively known as stress-activated MAPKs, as they are activated in response to a variety of environmental stresses and pro-inflammatory cytokines. MEKK4 also plays roles in the re-polarization of the actin cytoskeleton in response to osmotic stress, in the proper closure of the neural tube, in cardiovascular development, and in immune responses. Length = 264

>gnl|CDD|173743 cd07846, STKc_CDKL2_3, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3

 Score = 71.3 bits (175), Expect = 1e-14
 Identities = 65/245 (26%), Positives = 98/245 (40%), Gaps = 80/245 (32%)

Query: 6   HDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG-STT 64
           H   +IH D+KPEN+L VS                          +S  +K+ DFG + T
Sbjct: 117 HSHNIIHRDIKPENIL-VS--------------------------QSGVVKLCDFGFART 149

Query: 65  YERPDQNYI--VSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHENLEH 121
              P + Y   V+TR YRAPE+++G   +    DIW+VGC++ E+ TGE LF    +++ 
Sbjct: 150 LAAPGEVYTDYVATRWYRAPELLVGDTKYGRAVDIWAVGCLVTEMLTGEPLFPGDSDIDQ 209

Query: 122 LAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASR-ESIKSVMKLPRLQVPFFY 180
           L  + + LG L       + RH E + +      P  A  R   +K +  L +   P   
Sbjct: 210 LYHIIKCLGNL-------IPRHQEIFQKN-----PLFAGMRLPEVKEIEPLEKR-FPKLS 256

Query: 181 GSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREAL 240
           G  ++    C                                   LR DP DR ++ + L
Sbjct: 257 GLVLDLAKQC-----------------------------------LRIDPDDRPSSSQLL 281

Query: 241 RHPFF 245
            H FF
Sbjct: 282 HHEFF 286

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKIAMRE (NKIATRE in rat), by translocation is associated with mild mental retardation. It has been reported that CDKL3 is lost in leukemic cells having a chromosome arm 5q deletion, and may contribute to the transformed phenotype. Length = 286

>gnl|CDD|173672 cd05581, STKc_PDK1, Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1

 Score = 71.1 bits (175), Expect = 1e-14
 Identities = 31/111 (27%), Positives = 53/111 (47%), Gaps = 8/111 (7%)

Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           +H   +IH DLKPEN+LL    +IK+ D+ ++     +SS        S         + 
Sbjct: 118 LHSKGIIHRDLKPENILLDKDMHIKITDFGTAKVLDPNSS------PESNKGDATNIDSQ 171

Query: 65  YERPDQN--YIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALF 113
            E+  +     V T  Y +PE++         D+W++GCI+ ++ TG+  F
Sbjct: 172 IEKNRRRFASFVGTAEYVSPELLNEKPAGKSSDLWALGCIIYQMLTGKPPF 222

Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to autophosphorylate and is constitutively active in mammalian cells. PDK1 is essential for normal embryo development and is important in regulating cell volume. Length = 280

>gnl|CDD|173735 cd07831, STKc_MOK, Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase

 Score = 71.1 bits (175), Expect = 2e-14
 Identities = 43/138 (31%), Positives = 62/138 (44%), Gaps = 31/138 (22%)

Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGS-- 62
           MH   + H D+KPEN+L+                            K   +K+ DFGS  
Sbjct: 116 MHRNGIFHRDIKPENILI----------------------------KDDILKLADFGSCR 147

Query: 63  TTYERPDQNYIVSTRHYRAPEVILGLG-WTYPCDIWSVGCILVELCTGEALFQTHENLEH 121
             Y +P     +STR YRAPE +L  G +    DIW+VGC+  E+ +   LF     L+ 
Sbjct: 148 GIYSKPPYTEYISTRWYRAPECLLTDGYYGPKMDIWAVGCVFFEILSLFPLFPGTNELDQ 207

Query: 122 LAMMERVLGPLPQHMLKR 139
           +A +  VLG     +LK+
Sbjct: 208 IAKIHDVLGTPDAEVLKK 225

Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation. Length = 282

>gnl|CDD|173724 cd06606, STKc_MAPKKK, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase

 Score = 70.3 bits (173), Expect = 2e-14
 Identities = 34/145 (23%), Positives = 56/145 (38%), Gaps = 41/145 (28%)

Query: 3   AVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGS 62
           A +H   ++H D+K  N+L+ S                              +K+ DFG 
Sbjct: 115 AYLHSNGIVHRDIKGANILVDSD---------------------------GVVKLADFGC 147

Query: 63  TTYERPDQNYIVSTRHYR------APEVILGLGWTYPCDIWSVGCILVELCTGEALFQTH 116
                 D      T   R      APEVI G  +    DIWS+GC ++E+ TG+  +   
Sbjct: 148 AK-RLGDIETGEGTGSVRGTPYWMAPEVIRGEEYGRAADIWSLGCTVIEMATGKPPW--S 204

Query: 117 ENLEHLAMMERVLG-----PLPQHM 136
           E    +A + ++        +P+H+
Sbjct: 205 ELGNPMAALYKIGSSGEPPEIPEHL 229

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKKK5) and ASK2 (or MAPKKK6), MEKK1, MEKK2, MEKK3, MEKK4, as well as plant and fungal MAPKKKs. Also included in this subfamily are the cell division control proteins Schizosaccharomyces pombe Cdc7 and Saccharomyces cerevisiae Cdc15. Length = 260

>gnl|CDD|177649 PLN00009, PLN00009, cyclin-dependent kinase A; Provisional

 Score = 70.2 bits (172), Expect = 3e-14
 Identities = 65/247 (26%), Positives = 98/247 (39%), Gaps = 79/247 (31%)

Query: 3   AVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG- 61
           A  H   ++H DLKP+N+L+                             ++A+K+ DFG 
Sbjct: 116 AYCHSHRVLHRDLKPQNLLIDRR--------------------------TNALKLADFGL 149

Query: 62  STTYERPDQNYI--VSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHEN 118
           +  +  P + +   V T  YRAPE++LG   ++ P DIWSVGCI  E+   + LF     
Sbjct: 150 ARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDIWSVGCIFAEMVNQKPLFPGDSE 209

Query: 119 LEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVPF 178
           ++ L  + R+LG   +                    WP           V  LP      
Sbjct: 210 IDELFKIFRILGTPNEET------------------WP----------GVTSLP------ 235

Query: 179 FYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTARE 238
                 ++K     +   D +A+    L    VD        LL  +LR DP+ R+TAR 
Sbjct: 236 ------DYKSAFPKWPPKD-LATVVPTLEPAGVD--------LLSKMLRLDPSKRITARA 280

Query: 239 ALRHPFF 245
           AL H +F
Sbjct: 281 ALEHEYF 287

Length = 294

>gnl|CDD|173659 cd05122, PKc_STE, Catalytic domain of STE family Protein Kinases

 Score = 69.2 bits (170), Expect = 5e-14
 Identities = 33/107 (30%), Positives = 46/107 (42%), Gaps = 29/107 (27%)

Query: 6   HDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG-STT 64
           H   +IH D+K  N+LL S                              +K+IDFG S  
Sbjct: 115 HSNGIIHRDIKAANILLTS---------------------------DGEVKLIDFGLSAQ 147

Query: 65  YE-RPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGE 110
                 +N +V T ++ APEVI G  + Y  DIWS+G   +EL  G+
Sbjct: 148 LSDTKARNTMVGTPYWMAPEVINGKPYDYKADIWSLGITAIELAEGK 194

Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and activated by a MAPKK, which itself is phosphorylated and activated by a MAPKKK. Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAPKKK to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. Other STE family members include p21-activated kinases (PAKs) and class III myosins, among others. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain, which can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, as well as autophosphorylate the C-terminal motor domain. They play an important role in maintaining the structural integrity of photoreceptor cell microvilli. Length = 253

>gnl|CDD|143379 cd07874, STKc_JNK3, Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3

 Score = 70.1 bits (171), Expect = 6e-14
 Identities = 66/244 (27%), Positives = 103/244 (42%), Gaps = 69/244 (28%)

Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           +H   +IH DLKP N+++ S   +K+ D+              R   +S      F  T 
Sbjct: 135 LHSAGIIHRDLKPSNIVVKSDCTLKILDFG-----------LARTAGTS------FMMTP 177

Query: 65  YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHL-A 123
           Y        V TR+YRAPEVILG+G+    DIWSVGCI+ E+   + LF   + ++    
Sbjct: 178 Y--------VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNK 229

Query: 124 MMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVPFFYGSF 183
           ++E++  P P+ M K++      YV     + P+ A         +  P+L         
Sbjct: 230 VIEQLGTPCPEFM-KKLQPTVRNYVE----NRPKYAG--------LTFPKL--------- 267

Query: 184 VEFKGYCLAFRCTDCIASFCQNLIMQHVDHS---AGDLTHLLQGLLRYDPTDRLTAREAL 240
                             F  +L     +H+   A     LL  +L  DP  R++  EAL
Sbjct: 268 ------------------FPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDEAL 309

Query: 241 RHPF 244
           +HP+
Sbjct: 310 QHPY 313

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, stroke, sciatic axotomy neural death, and neuronal death due to NGF deprivation, oxidative stress, or exposure to beta-amyloid peptide. This suggests that JNK3 may play roles in the pathogenesis of these diseases. Length = 355

>gnl|CDD|173664 cd05573, STKc_ROCK_NDR_like, Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases

 Score = 69.6 bits (171), Expect = 7e-14
 Identities = 36/113 (31%), Positives = 53/113 (46%), Gaps = 5/113 (4%)

Query: 6   HDLCMIHTDLKPENVLLVSSEYIKVPDYKSS--LHTPKDSSYFK--RMPKSSAIKVIDFG 61
           H L  IH D+KP+N+L+ +  +IK+ D+     ++  KD  Y+            V+   
Sbjct: 118 HKLGFIHRDIKPDNILIDADGHIKLADFGLCKKMNKAKDREYYLNDSHNLLFRDNVLVRR 177

Query: 62  STTYERP-DQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALF 113
               +R    N  V T  Y APEV+ G  +   CD WS+G IL E+  G   F
Sbjct: 178 RDHKQRRVRANSTVGTPDYIAPEVLRGTPYGLECDWWSLGVILYEMLYGFPPF 230

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Proteins in this subfamily are involved in regulating many cellular functions including contraction, motility, division, proliferation, apoptosis, morphogenesis, and cytokinesis. Length = 350

>gnl|CDD|173742 cd07845, STKc_CDK10, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10

 Score = 68.9 bits (169), Expect = 1e-13
 Identities = 39/130 (30%), Positives = 59/130 (45%), Gaps = 31/130 (23%)

Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG-ST 63
           +H+  +IH DLK  N+L                           +     +K+ DFG + 
Sbjct: 124 LHENFIIHRDLKVSNLL---------------------------LTDKGCLKIADFGLAR 156

Query: 64  TYERPDQNYI--VSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHENLE 120
           TY  P +     V T  YRAPE++LG   +T   D+W+VGCIL EL   + L      +E
Sbjct: 157 TYGLPAKPMTPKVVTLWYRAPELLLGCTTYTTAIDMWAVGCILAELLAHKPLLPGKSEIE 216

Query: 121 HLAMMERVLG 130
            L ++ ++LG
Sbjct: 217 QLDLIIQLLG 226

Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing increases the transcription of c-RAF and the activation of the p42/p44 MAPK pathway, which leads to antiestrogen resistance. Patients who express low levels of CDK10 relapse early on tamoxifen. Length = 309

>gnl|CDD|173690 cd05599, STKc_NDR_like, Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

 Score = 68.9 bits (169), Expect = 1e-13
 Identities = 34/118 (28%), Positives = 55/118 (46%), Gaps = 14/118 (11%)

Query: 6   HDLCMIHTDLKPENVLLVSSEYIKVPDYK--SSLHTPKDSSYFKRMPKSSAIKVIDFGST 63
           H L  IH D+KP+N+LL +  +IK+ D+   + L     + +++ +  +     +DF S 
Sbjct: 118 HKLGYIHRDIKPDNLLLDAKGHIKLSDFGLCTGLKKSHRTEFYRILSHALPSNFLDFISK 177

Query: 64  TYERPD--QNY----------IVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG 109
                   + +           V T  Y APEV L  G+   CD WS+G I+ E+  G
Sbjct: 178 PMSSKRKAETWKRNRRALAYSTVGTPDYIAPEVFLQTGYNKECDWWSLGVIMYEMLVG 235

Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplication. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. This subfamily also contains fungal NDR-like kinases. Length = 364

>gnl|CDD|173753 cd07864, STKc_CDK12, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12

 Score = 68.3 bits (167), Expect = 2e-13
 Identities = 60/241 (24%), Positives = 91/241 (37%), Gaps = 74/241 (30%)

Query: 6   HDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTY 65
           H    +H D+K  N+LL +   IK+ D+  +     + S                     
Sbjct: 133 HKKNFLHRDIKCSNILLNNKGQIKLADFGLARLYNSEES--------------------- 171

Query: 66  ERPDQNYIVSTRHYRAPEVILGLGWTYPC-DIWSVGCILVELCTGEALFQTHENLEHLAM 124
            RP  N ++ T  YR PE++LG     P  D+WS GCIL EL T + +FQ ++ L  L +
Sbjct: 172 -RPYTNKVI-TLWYRPPELLLGEERYGPAIDVWSCGCILGELFTKKPIFQANQELAQLEL 229

Query: 125 MERVLG-PLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVPFFYGSF 183
           + R+ G P P                     WP+          V+KLP      ++ + 
Sbjct: 230 ISRLCGSPCPA-------------------VWPD----------VIKLP------YFNTM 254

Query: 184 VEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHP 243
              K Y              +  + +           LL  +L  DP+ R TA EAL  P
Sbjct: 255 KPKKQY--------------RRRLREEFSFIPTPALDLLDHMLTLDPSKRCTAEEALNSP 300

Query: 244 F 244
           +
Sbjct: 301 W 301

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely expressed in tissues. It interacts with cyclins L1 and L2, and plays roles in regulating transcription and alternative splicing. Length = 302

>gnl|CDD|143380 cd07875, STKc_JNK1, Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1

 Score = 68.1 bits (166), Expect = 3e-13
 Identities = 46/135 (34%), Positives = 69/135 (51%), Gaps = 26/135 (19%)

Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           +H   +IH DLKP N+++ S   +K+ D+              R   +S      F  T 
Sbjct: 142 LHSAGIIHRDLKPSNIVVKSDCTLKILDFG-----------LARTAGTS------FMMTP 184

Query: 65  YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHL-A 123
           Y        V TR+YRAPEVILG+G+    DIWSVGCI+ E+  G  LF   ++++    
Sbjct: 185 Y--------VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNK 236

Query: 124 MMERVLGPLPQHMLK 138
           ++E++  P P+ M K
Sbjct: 237 VIEQLGTPCPEFMKK 251

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jnk1 or Jnk2) could survive but disruption of both genes resulted in lethality. However, recent studies have shown that JNK1 and JNK2 perform distinct functions through specific binding partners and substrates. JNK1 specifically binds with JAMP (JNK1-associated membrane protein), which regulates the duration of JNK1 activity in response to stimuli. Specific JNK1 substrates include Itch and SG10, which are implicated in Th2 responses and airway inflammation, and microtubule dynamics and axodendritic length, respectively. Mice deficient in Jnk1 are protected against arthritis, obesity, type 2 diabetes, cardiac cell death, and non-alcoholic liver disease, suggesting that JNK1 may play roles in the pathogenesis of these diseases. Length = 364

>gnl|CDD|173755 cd08215, STKc_Nek, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase

 Score = 66.8 bits (164), Expect = 4e-13
 Identities = 38/136 (27%), Positives = 61/136 (44%), Gaps = 33/136 (24%)

Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG-ST 63
           +H   ++H D+KP+N+ L +S  +                          +K+ DFG S 
Sbjct: 119 LHSRKILHRDIKPQNIFL-TSNGL--------------------------VKLGDFGISK 151

Query: 64  TYERPDQ--NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEH 121
                      +V T +Y +PE+     + Y  DIWS+GC+L ELCT +  F+  ENL  
Sbjct: 152 VLSSTVDLAKTVVGTPYYLSPELCQNKPYNYKSDIWSLGCVLYELCTLKHPFE-GENLLE 210

Query: 122 LAM--MERVLGPLPQH 135
           LA+  ++    P+P  
Sbjct: 211 LALKILKGQYPPIPSQ 226

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Length = 258

>gnl|CDD|143376 cd07871, STKc_PCTAIRE3, Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase

 Score = 66.6 bits (162), Expect = 7e-13
 Identities = 65/241 (26%), Positives = 92/241 (38%), Gaps = 73/241 (30%)

Query: 6   HDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTY 65
           H   ++H DLKP+N+L+     +K+ D+          +  K +P           + TY
Sbjct: 120 HKRKILHRDLKPQNLLINEKGELKLADF--------GLARAKSVP-----------TKTY 160

Query: 66  ERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAM 124
                   V T  YR P+V+LG   ++ P D+W VGCIL E+ TG  +F      E L +
Sbjct: 161 SNE-----VVTLWYRPPDVLLGSTEYSTPIDMWGVGCILYEMATGRPMFPGSTVKEELHL 215

Query: 125 MERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVPFFYGSFV 184
           + R+LG   +                    WP G  S E                     
Sbjct: 216 IFRLLGTPTEE------------------TWP-GITSNE--------------------- 235

Query: 185 EFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPF 244
           EF+ Y   F          Q LI  H      D   LL  LL Y+   R++A  ALRH +
Sbjct: 236 EFRSY--LFPQY-----RAQPLI-NHAPRLDTDGIDLLSSLLLYETKSRISAEAALRHSY 287

Query: 245 F 245
           F
Sbjct: 288 F 288

Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filaments (PHFs) and stimulate Tau phosphorylation. As AD progresses, phosphorylated Tau aggregates and forms PHFs, which leads to the formation of neurofibrillary tangles (NFTs). In human glioma cells, PCTAIRE-3 induces cell cycle arrest and cell death. Length = 288

>gnl|CDD|173772 cd08530, STKc_CNK2-like, Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains

 Score = 65.9 bits (161), Expect = 7e-13
 Identities = 35/111 (31%), Positives = 53/111 (47%), Gaps = 26/111 (23%)

Query: 4   VMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGST 63
            +H+  ++H DLK  N+LLV+++ +K+ D   S          K + K+ A   I     
Sbjct: 118 ALHEQKILHRDLKSANILLVANDLVKIGDLGIS----------KVLKKNMAKTQI----- 162

Query: 64  TYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQ 114
                       T HY APEV  G  ++Y  DIWS+GC+L E+ T    F+
Sbjct: 163 -----------GTPHYMAPEVWKGRPYSYKSDIWSLGCLLYEMATFAPPFE 202

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, and it regulates cell size, through influencing the size threshold at which cells commit to mitosis. Length = 256

>gnl|CDD|143368 cd07863, STKc_CDK4, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4

 Score = 65.8 bits (160), Expect = 1e-12
 Identities = 58/244 (23%), Positives = 90/244 (36%), Gaps = 76/244 (31%)

Query: 2   FAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG 61
              +H  C++H DLKPEN+L+ S   +K+ D+  +        Y  +M  +         
Sbjct: 121 LDFLHANCIVHRDLKPENILVTSGGQVKLADFGLA------RIYSCQMALTP-------- 166

Query: 62  STTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEH 121
                      +V T  YRAPEV+L   +  P D+WSVGCI  E+   + LF  +   + 
Sbjct: 167 -----------VVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQ 215

Query: 122 LAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVPFFYG 181
           L  +  ++G  P+                   DWP          S    PR   P    
Sbjct: 216 LGKIFDLIGLPPED------------------DWPRDVTLPRGAFS----PRGPRPV--- 250

Query: 182 SFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALR 241
                            +           ++ S      LL  +L ++P  R++A  AL+
Sbjct: 251 --------------QSVVPE---------IEESGAQ---LLLEMLTFNPHKRISAFRALQ 284

Query: 242 HPFF 245
           HPFF
Sbjct: 285 HPFF 288

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the nucleus. CDK4 also shows kinase activity towards Smad3, a signal transducer of transforming growth factor (TGF)-beta signaling which modulates transcription and plays a role in cell proliferation and apoptosis. CDK4 is inhibited by the p21 inhibitor and is specifically mutated in human melanoma. Length = 288

>gnl|CDD|143342 cd07837, STKc_CdkB_plant, Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase

 Score = 65.2 bits (159), Expect = 2e-12
 Identities = 39/130 (30%), Positives = 59/130 (45%), Gaps = 32/130 (24%)

Query: 6   HDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG-STT 64
           H   ++H DLKP+N+L+   + +                          +K+ D G    
Sbjct: 127 HKHGVMHRDLKPQNLLVDKQKGL--------------------------LKIADLGLGRA 160

Query: 65  YERPDQNYI--VSTRHYRAPEVILGLGWTY--PCDIWSVGCILVELCTGEALFQTHENLE 120
           +  P ++Y   + T  YRAPEV+LG    Y  P DIWSVGCI  E+   + LF     L+
Sbjct: 161 FSIPVKSYTHEIVTLWYRAPEVLLG-STHYSTPVDIWSVGCIFAEMSRKQPLFPGDSELQ 219

Query: 121 HLAMMERVLG 130
            L  + ++LG
Sbjct: 220 QLLHIFKLLG 229

Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developmental pathways, such as stomata and leaf development. CdkB has been shown to associate with both cyclin B, which controls G2/M transition, and cyclin D, which acts as a mediator in linking extracellular signals to the cell cycle. Length = 295

>gnl|CDD|143372 cd07867, STKc_CDC2L6, Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6

 Score = 64.7 bits (157), Expect = 4e-12
 Identities = 66/248 (26%), Positives = 100/248 (40%), Gaps = 61/248 (24%)

Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG-ST 63
           +H   ++H DLKP N+L++                          P+   +K+ D G + 
Sbjct: 124 LHANWVLHRDLKPANILVMGEG-----------------------PERGRVKIADMGFAR 160

Query: 64  TYERP-----DQNYIVSTRHYRAPEVILGL-GWTYPCDIWSVGCILVELCTGEALFQTHE 117
            +  P     D + +V T  YRAPE++LG   +T   DIW++GCI  EL T E +F   +
Sbjct: 161 LFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQ 220

Query: 118 NLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVP 177
                   E +    P H   ++DR           DW       E I+ + + P LQ  
Sbjct: 221 --------EDIKTSNPFHH-DQLDRIFSVMGFPADKDW-------EDIRKMPEYPTLQKD 264

Query: 178 FFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAR 237
                          FR T    S     + +H       +  LLQ LL  DPT R+T+ 
Sbjct: 265 ---------------FRRTTYANSSLIKYMEKHKVKPDSKVFLLLQKLLTMDPTKRITSE 309

Query: 238 EALRHPFF 245
           +AL+ P+F
Sbjct: 310 QALQDPYF 317

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as the caspase-processed CDK11(p46). CDK11(p110), CDK11(p58), and CDK11(p46)do not belong to this subfamily. CDC2L6 is an associated protein of Mediator, a multiprotein complex that provides a platform to connect transcriptional and chromatin regulators and cofactors, in order to activate and mediate RNA polymerase II transcription. CDC2L6 is localized mainly in the nucleus amd exerts an opposing effect to CDK8 in VP16-dependent transcriptional activation by being a negative regulator. Length = 317

>gnl|CDD|173702 cd05611, STKc_Rim15_like, Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases

 Score = 64.0 bits (156), Expect = 4e-12
 Identities = 41/173 (23%), Positives = 62/173 (35%), Gaps = 51/173 (29%)

Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           +H   +IH D+KPEN+L+  + ++K+ D+  S           R                
Sbjct: 113 LHQRGIIHRDIKPENLLIDQTGHLKLTDFGLS-----------RN--------------G 147

Query: 65  YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAM 124
            E       V T  Y APE ILG+G     D WS+GC++ E   G   F           
Sbjct: 148 LENKK---FVGTPDYLAPETILGVGDDKMSDWWSLGCVIFEFLFGYPPFHAET------- 197

Query: 125 MERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVP 177
                   P  +   +           R++WPE      S ++V  + RL   
Sbjct: 198 --------PDAVFDNIL--------SRRINWPEEVKEFCSPEAVDLINRLLCM 234

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a downstream effector of PKA and regulates entry into stationary phase (G0). Thus, it plays a crucial role in regulating yeast proliferation, differentiation, and aging. Cek1 may facilitate progression of mitotic anaphase. Length = 260

>gnl|CDD|143344 cd07839, STKc_CDK5, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5

 Score = 63.6 bits (155), Expect = 6e-12
 Identities = 61/247 (24%), Positives = 93/247 (37%), Gaps = 85/247 (34%)

Query: 6   HDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG-STT 64
           H   ++H DLKP+N+L+                            K+  +K+ DFG +  
Sbjct: 116 HSHNVLHRDLKPQNLLI---------------------------NKNGELKLADFGLARA 148

Query: 65  YERPDQNYI--VSTRHYRAPEVILGL-GWTYPCDIWSVGCILVELCT-GEALFQTHENLE 120
           +  P + Y   V T  YR P+V+ G   ++   D+WS GCI  EL   G  LF  ++  +
Sbjct: 149 FGIPVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDD 208

Query: 121 HLAMMERVLG-PLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVPFF 179
            L  + R+LG P  +                    WP           V KLP       
Sbjct: 209 QLKRIFRLLGTPTEE-------------------SWP----------GVSKLP------- 232

Query: 180 YGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTH-LLQGLLRYDPTDRLTARE 238
                ++K Y            +     + +V          LLQ LL  +P  R++A E
Sbjct: 233 -----DYKPY----------PMYPATTSLVNVVPKLNSTGRDLLQNLLVCNPVQRISAEE 277

Query: 239 ALRHPFF 245
           AL+HP+F
Sbjct: 278 ALQHPYF 284

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also important in synaptic plasticity and learning. CDK5 also participates in protecting against cell death and promoting angiogenesis. Impaired CDK5 activity is implicated in Alzheimer's disease, amyotrophic lateral sclerosis, Parkinson's disease, Huntington's disease and acute neuronal injury. Length = 284

>gnl|CDD|173333 PTZ00036, PTZ00036, glycogen synthase kinase; Provisional

 Score = 64.3 bits (156), Expect = 7e-12
 Identities = 43/144 (29%), Positives = 68/144 (47%), Gaps = 31/144 (21%)

Query: 2   FAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG 61
            A +H   + H DLKP+N+L+                           P +  +K+ DFG
Sbjct: 183 LAYIHSKFICHRDLKPQNLLI--------------------------DPNTHTLKLCDFG 216

Query: 62  STTYERPDQ---NYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHE 117
           S       Q   +YI S R YRAPE++LG   +T   D+WS+GCI+ E+  G  +F    
Sbjct: 217 SAKNLLAGQRSVSYICS-RFYRAPELMLGATNYTTHIDLWSLGCIIAEMILGYPIFSGQS 275

Query: 118 NLEHLAMMERVLGPLPQHMLKRVD 141
           +++ L  + +VLG   +  LK ++
Sbjct: 276 SVDQLVRIIQVLGTPTEDQLKEMN 299

Length = 440

>gnl|CDD|143367 cd07862, STKc_CDK6, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6

 Score = 63.1 bits (153), Expect = 9e-12
 Identities = 38/131 (29%), Positives = 62/131 (47%), Gaps = 26/131 (19%)

Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           +H   ++H DLKP+N+L+ SS  IK+ D+  +                   ++  F    
Sbjct: 126 LHSHRVVHRDLKPQNILVTSSGQIKLADFGLA-------------------RIYSFQMAL 166

Query: 65  YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAM 124
                   +V T  YRAPEV+L   +  P D+WSVGCI  E+   + LF+   +++ L  
Sbjct: 167 ------TSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGK 220

Query: 125 MERVLG-PLPQ 134
           +  V+G P  +
Sbjct: 221 ILDVIGLPGEE 231

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytoplasm. It is also present in the ruffling edge of spreading fibroblasts and may play a role in cell spreading. It binds to the p21 inhibitor without any effect on its own activity and it is overexpressed in squamous cell carcinomas and neuroblastomas. CDK6 has also been shown to inhibit cell differentiation in many cell types. Length = 290

>gnl|CDD|143349 cd07844, STKc_PCTAIRE_like, Catalytic domain of PCTAIRE-like Serine/Threonine Kinases

 Score = 63.2 bits (154), Expect = 1e-11
 Identities = 66/256 (25%), Positives = 93/256 (36%), Gaps = 94/256 (36%)

Query: 3   AVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG- 61
           A  H   ++H DLKP+N LL+S                          +   +K+ DFG 
Sbjct: 117 AYCHQRRVLHRDLKPQN-LLIS--------------------------ERGELKLADFGL 149

Query: 62  -------STTYERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALF 113
                  S TY        V T  YR P+V+LG   ++   D+W VGCI  E+ TG  LF
Sbjct: 150 ARAKSVPSKTYSNE-----VVTLWYRPPDVLLGSTEYSTSLDMWGVGCIFYEMATGRPLF 204

Query: 114 QTHEN-LEHLAMMERVLG-PLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKL 171
               +  + L  + RVLG P  +                    WP           V   
Sbjct: 205 PGSTDVEDQLHKIFRVLGTPTEE-------------------TWP----------GVSSN 235

Query: 172 PRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQ--HVDHSAGDLTHLLQGLLRYD 229
           P            EFK Y  +F          + LI     +D        L    L+Y+
Sbjct: 236 P------------EFKPY--SFPFYP-----PRPLINHAPRLDRIPHGE-ELALKFLQYE 275

Query: 230 PTDRLTAREALRHPFF 245
           P  R++A EA++HP+F
Sbjct: 276 PKKRISAAEAMKHPYF 291

Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the membrane-associated cyclin Y. PCTAIRE-like proteins show unusual expression patterns with high levels in post-mitotic tissues, suggesting that they may be involved in regulating post-mitotic cellular events. Length = 291

>gnl|CDD|223589 COG0515, SPS1, Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]

 Score = 62.8 bits (151), Expect = 2e-11
 Identities = 43/141 (30%), Positives = 61/141 (43%), Gaps = 22/141 (15%)

Query: 3   AVMHDLCMIHTDLKPENVLLVSSEY-IKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG 61
             +H   +IH D+KPEN+LL      +K+ D+                    A  + D G
Sbjct: 115 EYLHSKGIIHRDIKPENILLDRDGRVVKLIDF------------------GLAKLLPDPG 156

Query: 62  STTYERPDQNYIVSTRHYRAPEVILGLGWTYPC---DIWSVGCILVELCTGEALFQTHEN 118
           ST+      +  V T  Y APEV+LGL   Y     DIWS+G  L EL TG   F+  +N
Sbjct: 157 STSSIPALPSTSVGTPGYMAPEVLLGLSLAYASSSSDIWSLGITLYELLTGLPPFEGEKN 216

Query: 119 LEHLAMMERVLGPLPQHMLKR 139
               +   +++  LP   L  
Sbjct: 217 SSATSQTLKIILELPTPSLAS 237

Length = 384

>gnl|CDD|173731 cd06627, STKc_Cdc7_like, Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases

 Score = 61.9 bits (151), Expect = 2e-11
 Identities = 32/108 (29%), Positives = 46/108 (42%), Gaps = 30/108 (27%)

Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           +H+  +IH D+K  N+L                             K   +K+ DFG  T
Sbjct: 115 LHEQGVIHRDIKAANIL---------------------------TTKDGVVKLADFGVAT 147

Query: 65  Y---ERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG 109
                  D   +V T ++ APEVI   G +   DIWS+GC ++EL TG
Sbjct: 148 KLNDVSKDDASVVGTPYWMAPEVIEMSGASTASDIWSLGCTVIELLTG 195

Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast Cdc7 is essential for cell division by playing a key role in the initiation of septum formation and cytokinesis. Budding yeast Cdc15 functions to coordinate mitotic exit with cytokinesis. Arabidopsis MAPKKK epsilon is required for pollen development in the plasma membrane. Length = 254

>gnl|CDD|132961 cd06630, STKc_MEKK1, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1

 Score = 61.8 bits (150), Expect = 3e-11
 Identities = 33/140 (23%), Positives = 71/140 (50%), Gaps = 26/140 (18%)

Query: 3   AVMHDLCMIHTDLKPENVLLVSS-EYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG 61
           + +H+  +IH D+K  N+L+ S+ + +++ D+                   +A ++   G
Sbjct: 117 SYLHENQIIHRDVKGANLLIDSTGQRLRIADF------------------GAAARLAAKG 158

Query: 62  STTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEH 121
           +   E   Q  ++ T  + APEV+ G  +   CD+WSVGC+++E+ T +  +   ++  H
Sbjct: 159 TGAGEFQGQ--LLGTIAFMAPEVLRGEQYGRSCDVWSVGCVIIEMATAKPPWNAEKHSNH 216

Query: 122 LAMMERVLG-----PLPQHM 136
           LA++ ++        +P+H+
Sbjct: 217 LALIFKIASATTAPSIPEHL 236

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their respective MAPKKs, MEK1/2 and MKK4/MKK7, respectively. MEKK1 is important in regulating cell survival and apoptosis. MEKK1 also plays a role in cell migration, tissue maintenance and homeostasis, and wound healing. Length = 268

>gnl|CDD|173691 cd05600, STKc_Sid2p_Dbf2p, Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases

 Score = 61.7 bits (150), Expect = 4e-11
 Identities = 39/123 (31%), Positives = 56/123 (45%), Gaps = 33/123 (26%)

Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           +H+L  IH DLKPEN L+ +S +IK+                            DFG + 
Sbjct: 117 LHELGYIHRDLKPENFLIDASGHIKL---------------------------TDFGLSK 149

Query: 65  YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALF------QTHEN 118
                 N +V +  Y APEV+ G G+ +  D WS+GC+L E   G   F      +T EN
Sbjct: 150 GIVTYANSVVGSPDYMAPEVLRGKGYDFTVDYWSLGCMLYEFLCGFPPFSGSTPNETWEN 209

Query: 119 LEH 121
           L++
Sbjct: 210 LKY 212

Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis. Dbf2p is important in regulating the mitotic exit network (MEN) and in cytokinesis. Length = 333

>gnl|CDD|173718 cd05629, STKc_NDR_like_fungal, Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

 Score = 61.4 bits (149), Expect = 6e-11
 Identities = 49/181 (27%), Positives = 80/181 (44%), Gaps = 34/181 (18%)

Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSS--LHTPKDSSYFKRMPKSSAIK------ 56
           +H L  IH D+KP+N+L+    +IK+ D+  S   H   DS+Y++++ +  + K      
Sbjct: 117 VHKLGFIHRDIKPDNILIDRGGHIKLSDFGLSTGFHKQHDSAYYQKLLQGKSNKNRIDNR 176

Query: 57  ---VIDFGSTTYERPDQ------------NYIVSTRHYRAPEVILGLGWTYPCDIWSVGC 101
               +D  + T    DQ               V T  Y APE+ L  G+   CD WS+G 
Sbjct: 177 NSVAVDSINLTMSSKDQIATWKKNRRLMAYSTVGTPDYIAPEIFLQQGYGQECDWWSLGA 236

Query: 102 ILVELCTGEALF---QTHENL-------EHLAMMERV-LGPLPQHMLKRVDRHAEKYVRR 150
           I+ E   G   F    +HE         E L   + + L    + +++R+  +AE  + R
Sbjct: 237 IMFECLIGWPPFCSENSHETYRKIINWRETLYFPDDIHLSVEAEDLIRRLITNAENRLGR 296

Query: 151 G 151
           G
Sbjct: 297 G 297

Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of Ace2p activity and cellular morphogenesis) network. CBK1 and Orb6 play similar roles in coordinating cell morphology with cell cycle progression. Ukc1 is involved in morphogenesis, pathogenicity, and pigment formation. Cot1 plays a role in polar tip extension. Length = 377

>gnl|CDD|143378 cd07873, STKc_PCTAIRE1, Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase

 Score = 60.8 bits (147), Expect = 7e-11
 Identities = 60/241 (24%), Positives = 93/241 (38%), Gaps = 73/241 (30%)

Query: 6   HDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTY 65
           H   ++H DLKP+N+L+     +K+ D+               + ++ +I      + TY
Sbjct: 121 HRRKVLHRDLKPQNLLINERGELKLADFG--------------LARAKSIP-----TKTY 161

Query: 66  ERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAM 124
                   V T  YR P+++LG   ++   D+W VGCI  E+ TG  LF      E L  
Sbjct: 162 SNE-----VVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMSTGRPLFPGSTVEEQLHF 216

Query: 125 MERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVPFFYGSFV 184
           + R+LG   +                    WP G  S E                     
Sbjct: 217 IFRILGTPTEET------------------WP-GILSNE--------------------- 236

Query: 185 EFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPF 244
           EFK Y       DC+ +        H      D   LL  LL+++   R++A EA++HP+
Sbjct: 237 EFKSYNYPKYRADCLHN--------HAPRLDSDGAELLSKLLQFEGRKRISAEEAMKHPY 288

Query: 245 F 245
           F
Sbjct: 289 F 289

Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may play a role in regulating neurite outgrowth. It can also associate with Trap (Tudor repeat associator with PCTAIRE-2), a physiological partner of PCTAIRE-2; with p11, a small dimeric protein with similarity to S100; and with 14-3-3 proteins, mediators of phosphorylation-dependent interactions in many different proteins. Length = 301

>gnl|CDD|173757 cd08217, STKc_Nek2, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2

 Score = 60.3 bits (147), Expect = 7e-11
 Identities = 29/111 (26%), Positives = 49/111 (44%), Gaps = 24/111 (21%)

Query: 10  MIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD 69
           ++H DLKP N+ L ++  +K+ D+  +          K +   S        + TY    
Sbjct: 131 VLHRDLKPANIFLDANNNVKLGDFGLA----------KILGHDS------SFAKTY---- 170

Query: 70  QNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLE 120
               V T +Y +PE +  + +    DIWS+GC++ ELC     F     L+
Sbjct: 171 ----VGTPYYMSPEQLNHMSYDEKSDIWSLGCLIYELCALSPPFTARNQLQ 217

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exit. NIMA is involved in nuclear membrane fission. Vertebrate Nek2 is a cell cycle-regulated STK, localized in centrosomes and kinetochores, that regulates centrosome splitting at the G2/M phase. It also interacts with other mitotic kinases such as Polo-like kinase 1 and may play a role in spindle checkpoint. An increase in the expression of the human NEK2 gene is strongly associated with the progression of non-Hodgkin lymphoma. Length = 265

>gnl|CDD|143373 cd07868, STKc_CDK8, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8

 Score = 60.8 bits (147), Expect = 8e-11
 Identities = 64/248 (25%), Positives = 101/248 (40%), Gaps = 61/248 (24%)

Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG-ST 63
           +H   ++H DLKP N+L++                          P+   +K+ D G + 
Sbjct: 124 LHANWVLHRDLKPANILVMGEG-----------------------PERGRVKIADMGFAR 160

Query: 64  TYERP-----DQNYIVSTRHYRAPEVILGL-GWTYPCDIWSVGCILVELCTGEALFQTHE 117
            +  P     D + +V T  YRAPE++LG   +T   DIW++GCI  EL T E +F   +
Sbjct: 161 LFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQ 220

Query: 118 NLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVP 177
                   E +    P H   ++DR           DW       E IK + +   L   
Sbjct: 221 --------EDIKTSNPYHH-DQLDRIFNVMGFPADKDW-------EDIKKMPEHSTLMKD 264

Query: 178 FFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAR 237
           F   ++            T+C  S  + +    V   +    HLLQ LL  DP  R+T+ 
Sbjct: 265 FRRNTY------------TNC--SLIKYMEKHKVKPDSKAF-HLLQKLLTMDPIKRITSE 309

Query: 238 EALRHPFF 245
           +A++ P+F
Sbjct: 310 QAMQDPYF 317

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA polymerase II (RNAP II)-dependent transcription. CDK8 phosphorylates cyclin H, a subunit of the general transcription factor TFIIH, which results in the inhibition of TFIIH-dependent phosphorylation of the C-terminal domain (CTD) of RNAP II, facilitating the inhibition of transcription. It has also been shown to promote transcription by a mechanism that is likely to involve RNAP II phosphorylation. CDK8 also functions as a stimulus-specific positive coregulator of p53 transcriptional responses. Length = 317

>gnl|CDD|173714 cd05625, STKc_LATS1, Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1

 Score = 60.4 bits (146), Expect = 1e-10
 Identities = 43/139 (30%), Positives = 66/139 (47%), Gaps = 23/139 (16%)

Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPD---------------YKSSLHTPKDSSYFKRM 49
           +H +  IH D+KP+N+L+    +IK+ D               Y+S  H  +DS  F   
Sbjct: 117 VHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDSKYYQSGDHVRQDSMDFSNE 176

Query: 50  PKSSA-------IKVIDF-GSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGC 101
               A       +K ++   +  ++R   + +V T +Y APEV+L  G+T  CD WSVG 
Sbjct: 177 WGDPANCRCGDRLKPLERRAARQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGV 236

Query: 102 ILVELCTGEALFQTHENLE 120
           IL E+  G+  F     LE
Sbjct: 237 ILYEMLVGQPPFLAQTPLE 255

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype and poor prognosis. LATS1 induces G2 arrest and promotes cytokinesis. It may be a component of the mitotic exit network in higher eukaryotes. Length = 382

>gnl|CDD|132956 cd06625, STKc_MEKK3_like, Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

 Score = 58.3 bits (141), Expect = 4e-10
 Identities = 31/104 (29%), Positives = 51/104 (49%), Gaps = 21/104 (20%)

Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           +H   ++H D+K  N+L  S+  +K+ D+ +S          KR+     I      S T
Sbjct: 120 LHSNMIVHRDIKGANILRDSAGNVKLGDFGAS----------KRL---QTICS----SGT 162

Query: 65  YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT 108
             +     +  T ++ +PEVI G G+    D+WSVGC +VE+ T
Sbjct: 163 GMKS----VTGTPYWMSPEVISGEGYGRKADVWSVGCTVVEMLT 202

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK2 and MEKK3 activate MEK5 (also called MKK5), which activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. MEKK2 and MEKK3 can also activate the MAPKs, c-Jun N-terminal kinase (JNK) and p38, through their respective MAPKKs. Length = 263

>gnl|CDD|173673 cd05582, STKc_RSK_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase

 Score = 58.3 bits (141), Expect = 5e-10
 Identities = 41/132 (31%), Positives = 59/132 (44%), Gaps = 24/132 (18%)

Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           +H L +I+ DLKPEN+LL    +IK+ D+  S    K+S              ID     
Sbjct: 114 LHSLGIIYRDLKPENILLDEEGHIKLTDFGLS----KES--------------IDHEKKA 155

Query: 65  YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAM 124
           Y          T  Y APEV+   G T   D WS G ++ E+ TG   FQ  +  E + M
Sbjct: 156 YS------FCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGSLPFQGKDRKETMTM 209

Query: 125 MERVLGPLPQHM 136
           + +    +PQ +
Sbjct: 210 ILKAKLGMPQFL 221

Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylates all known RSK substrates. RSKs act as downstream effectors of mitogen-activated protein kinase (MAPK) and play key roles in mitogen-activated cell growth, differentiation, and survival. Mammals possess four RSK isoforms (RSK1-4) from distinct genes. RSK proteins are also referred to as MAP kinase-activated protein kinases (MAPKAPKs), p90-RSKs, or p90S6Ks. Length = 318

>gnl|CDD|173689 cd05598, STKc_LATS, Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor

 Score = 58.3 bits (141), Expect = 6e-10
 Identities = 38/128 (29%), Positives = 61/128 (47%), Gaps = 19/128 (14%)

Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPD---------------YKSSLHTPKDS-SYFKR 48
           +H +  IH D+KP+N+L+    +IK+ D               Y+   H  +DS    + 
Sbjct: 117 VHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDSKYYQKGDHHRQDSMEPSEE 176

Query: 49  M--PKSSAIKVID-FGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVE 105
                   +K ++      ++R   + +V T +Y APEV+L  G+T  CD WSVG IL E
Sbjct: 177 WSEIDRCRLKPLERRRKRQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYE 236

Query: 106 LCTGEALF 113
           +  G+  F
Sbjct: 237 MLVGQPPF 244

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Length = 376

>gnl|CDD|132954 cd06623, PKc_MAPKK_plant_like, Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins

 Score = 56.8 bits (138), Expect = 1e-09
 Identities = 35/133 (26%), Positives = 51/133 (38%), Gaps = 33/133 (24%)

Query: 6   HDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG-STT 64
               +IH D+KP N+L+ S   +K+ D                           FG S  
Sbjct: 117 TKRHIIHRDIKPSNLLINSKGEVKIAD---------------------------FGISKV 149

Query: 65  YER---PDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEH 121
            E        + V T  Y +PE I G  ++Y  DIWS+G  L+E   G+  F        
Sbjct: 150 LENTLDQCNTF-VGTVTYMSPERIQGESYSYAADIWSLGLTLLECALGKFPFLPPGQPSF 208

Query: 122 LAMMERVL-GPLP 133
             +M+ +  GP P
Sbjct: 209 FELMQAICDGPPP 221

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include MAPKKs from plants, kinetoplastids, alveolates, and mycetozoa. The MAPKK, LmxPK4, from Leishmania mexicana, is important in differentiation and virulence. Dictyostelium discoideum MEK1 is required for proper chemotaxis. MEK1 null mutants display severe defects in cell polarization and directional movement. Plants contain multiple MAPKKs like other eukaryotes. The Arabidopsis genome encodes for 10 MAPKKs while poplar and rice contain 13 MAPKKs each. The functions of these proteins have not been fully elucidated. There is evidence to suggest that MAPK cascades are involved in plant stress responses. In Arabidopsis, MKK3 plays a role in pathogen signaling, MKK2 is involved in cold and salt stress signaling, MKK4/MKK5 participates in innate immunity, and MKK7 regulates basal and systemic acquired resistance. Length = 264

>gnl|CDD|173719 cd05630, STKc_GRK6, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6

 Score = 56.6 bits (136), Expect = 2e-09
 Identities = 34/141 (24%), Positives = 63/141 (44%), Gaps = 25/141 (17%)

Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           +H   +++ DLKPEN+LL    +I++ D   ++H P+  +   R                
Sbjct: 118 LHQERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTIKGR---------------- 161

Query: 65  YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAM 124
                    V T  Y APEV+    +T+  D W++GC+L E+  G++ FQ  +       
Sbjct: 162 ---------VGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREE 212

Query: 125 MERVLGPLPQHMLKRVDRHAE 145
           +ER++  + +   ++    A 
Sbjct: 213 VERLVKEVQEEYSEKFSPDAR 233

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as multiple splice variants with different domain architectures. It is post-translationally palmitoylated and localized in the membrane. GRK6 plays important roles in the regulation of dopamine, M3 muscarinic, opioid, and chemokine receptor signaling. It also plays maladaptive roles in addiction and Parkinson's disease. GRK6-deficient mice exhibit altered dopamine receptor regulation, decreased lymphocyte chemotaxis, and increased acute inflammation and neutrophil chemotaxis. Length = 285

>gnl|CDD|173728 cd06614, STKc_PAK, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase

 Score = 54.9 bits (133), Expect = 5e-09
 Identities = 33/109 (30%), Positives = 50/109 (45%), Gaps = 30/109 (27%)

Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG--- 61
           +H   +IH D+K +N+LL                  KD S          +K+ DFG   
Sbjct: 132 LHSQNVIHRDIKSDNILL-----------------SKDGS----------VKLADFGFAA 164

Query: 62  STTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGE 110
             T E+  +N +V T ++ APEVI    +    DIWS+G + +E+  GE
Sbjct: 165 QLTKEKSKRNSVVGTPYWMAPEVIKRKDYGPKVDIWSLGIMCIEMAEGE 213

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). Group II PAKs contain a PBD and a catalytic domain, but lack other motifs found in group I PAKs. Since group II PAKs do not contain an obvious AID, they may be regulated differently from group I PAKs. Group I PAKs interact with the SH3 containing proteins Nck, Grb2 and PIX; no such binding has been demonstrated for group II PAKs. Length = 286

>gnl|CDD|173715 cd05626, STKc_LATS2, Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2

 Score = 55.4 bits (133), Expect = 6e-09
 Identities = 40/132 (30%), Positives = 64/132 (48%), Gaps = 23/132 (17%)

Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYK--SSLHTPKDSSYFKR--------MPKS-- 52
           +H +  IH D+KP+N+L+    +IK+ D+   +      +S Y+++        M  S  
Sbjct: 117 VHKMGFIHRDIKPDNILIDLDGHIKLTDFGLCTGFRWTHNSKYYQKGSHIRQDSMEPSDL 176

Query: 53  ----SAIKVIDFGSTTYERPDQNY-------IVSTRHYRAPEVILGLGWTYPCDIWSVGC 101
               S  +  D   T  +R  + +       +V T +Y APEV+L  G+T  CD WSVG 
Sbjct: 177 WDDVSNCRCGDRLKTLEQRATKQHQRCLAHSLVGTPNYIAPEVLLRKGYTQLCDWWSVGV 236

Query: 102 ILVELCTGEALF 113
           IL E+  G+  F
Sbjct: 237 ILFEMLVGQPPF 248

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with poor prognosis in acute lymphoblastic leukemia and breast cancer. Length = 381

>gnl|CDD|132989 cd06658, STKc_PAK5, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5

 Score = 54.7 bits (131), Expect = 8e-09
 Identities = 49/178 (27%), Positives = 73/178 (41%), Gaps = 33/178 (18%)

Query: 2   FAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG 61
            + +H+  +IH D+K +++LL S   IK+ D+       K                    
Sbjct: 131 LSYLHNQGVIHRDIKSDSILLTSDGRIKLSDFGFCAQVSK-------------------- 170

Query: 62  STTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEH 121
               E P +  +V T ++ APEVI  L +    DIWS+G +++E+  GE     + N   
Sbjct: 171 ----EVPKRKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGEP---PYFNEPP 223

Query: 122 LAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVPFF 179
           L  M R+   LP  +    D H    V RG LD       RE  +       LQ PF 
Sbjct: 224 LQAMRRIRDNLPPRV---KDSHKVSSVLRGFLDL---MLVREPSQRATAQELLQHPFL 275

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly expressed in the brain. It is not required for viability, but together with PAK6, it is required for normal levels of locomotion and activity, and for learning and memory. PAK5 cooperates with Inca (induced in neural crest by AP2) in the regulation of cell adhesion and cytoskeletal organization in the embryo and in neural crest cells during craniofacial development. PAK5 may also play a role in controlling the signaling of Raf-1, an effector of Ras, at the mitochondria. Length = 292

>gnl|CDD|132943 cd06612, STKc_MST1_2, Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2

 Score = 54.2 bits (131), Expect = 8e-09
 Identities = 29/109 (26%), Positives = 44/109 (40%), Gaps = 30/109 (27%)

Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG-ST 63
           +H    IH D+K  N+LL                            +    K+ DFG S 
Sbjct: 115 LHSNKKIHRDIKAGNILL---------------------------NEEGQAKLADFGVSG 147

Query: 64  --TYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGE 110
             T     +N ++ T  + APEVI  +G+    DIWS+G   +E+  G+
Sbjct: 148 QLTDTMAKRNTVIGTPFWMAPEVIQEIGYNNKADIWSLGITAIEMAEGK 196

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a MAPK kinase) and MEKK1 (a MAPK kinase kinase) by acting as a MAPK kinase kinase kinase (MAPKKKK). Activation of JNK by MST1 leads to caspase activation and apoptosis. MST1 has also been implicated in cell proliferation and differentiation. Krs1 may regulate cell growth arrest and apoptosis in response to cellular stress. Length = 256

>gnl|CDD|132940 cd06609, STKc_MST3_like, Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases

 Score = 53.8 bits (130), Expect = 1e-08
 Identities = 54/243 (22%), Positives = 74/243 (30%), Gaps = 112/243 (46%)

Query: 11  IHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG------STT 64
           IH D+K  N+LL                            +   +K+ DFG      ST 
Sbjct: 120 IHRDIKAANILLS---------------------------EEGDVKLADFGVSGQLTSTM 152

Query: 65  YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAM 124
            +R   N  V T  + APEVI   G+    DIWS+G   +EL  GE        L  L  
Sbjct: 153 SKR---NTFVGTPFWMAPEVIKQSGYDEKADIWSLGITAIELAKGEP------PLSDLHP 203

Query: 125 MERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVPFFYGSFV 184
           M RVL  +P++                                    P L+   F   F 
Sbjct: 204 M-RVLFLIPKN----------------------------------NPPSLEGNKFSKPFK 228

Query: 185 EFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPF 244
           +F   C                                   L  DP +R +A+E L+H F
Sbjct: 229 DFVSLC-----------------------------------LNKDPKERPSAKELLKHKF 253

Query: 245 FTR 247
             +
Sbjct: 254 IKK 256

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN) signaling pathway, and plays a role in cytokinesis. SPS1 plays a role in regulating proteins required for spore wall formation. MST4 plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. STK25 may play a role in the regulation of cell migration and polarization. Length = 274

>gnl|CDD|173723 cd06605, PKc_MAPKK, Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase

 Score = 53.5 bits (129), Expect = 2e-08
 Identities = 32/105 (30%), Positives = 44/105 (41%), Gaps = 26/105 (24%)

Query: 6   HDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTY 65
               +IH D+KP N+L+ S   IK+ D+  S           ++  S A           
Sbjct: 118 EKHKIIHRDVKPSNILVNSRGQIKLCDFGVS----------GQLVNSLA----------- 156

Query: 66  ERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGE 110
                   V T  Y APE I G  ++   DIWS+G  L+EL TG 
Sbjct: 157 -----KTFVGTSSYMAPERIQGNDYSVKSDIWSLGLSLIELATGR 196

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity PKs that phosphorylate their downstream targets, MAPKs, at specific threonine and tyrosine residues. There are three MAPK subfamilies: extracellular signal-regulated kinase (ERK), c-Jun N-terminal kinase (JNK), and p38. In mammalian cells, there are seven MAPKKs (named MKK1-7) and 20 MAPKKKs. Each MAPK subfamily can be activated by at least two cognate MAPKKs and by multiple MAPKKKs. Length = 265

>gnl|CDD|173671 cd05580, STKc_PKA, Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase

 Score = 53.3 bits (129), Expect = 2e-08
 Identities = 30/109 (27%), Positives = 45/109 (41%), Gaps = 27/109 (24%)

Query: 1   MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDF 60
               +H L +++ DLKPEN+LL S  Y                           IK+ DF
Sbjct: 113 ALEYLHSLDIVYRDLKPENLLLDSDGY---------------------------IKITDF 145

Query: 61  GSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG 109
           G     +     +  T  Y APE+IL  G+    D W++G ++ E+  G
Sbjct: 146 GFAKRVKGRTYTLCGTPEYLAPEIILSKGYGKAVDWWALGILIYEMLAG 194

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubiquitously in cells and interacts with many different downstream targets. It plays a role in the regulation of diverse processes such as growth, development, memory, metabolism, gene expression, immunity, and lipolysis. Length = 290

>gnl|CDD|173730 cd06624, STKc_ASK, Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase

 Score = 53.3 bits (128), Expect = 2e-08
 Identities = 43/131 (32%), Positives = 60/131 (45%), Gaps = 37/131 (28%)

Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           +HD  ++H D+K +NVL+                    ++Y      S  +K+ DFG  T
Sbjct: 124 LHDNQIVHRDIKGDNVLV--------------------NTY------SGVVKISDFG--T 155

Query: 65  YER-----PDQNYIVSTRHYRAPEVI-LGL-GWTYPCDIWSVGCILVELCTGEALFQTHE 117
            +R     P       T  Y APEVI  G  G+  P DIWS+GC +VE+ TG+  F   E
Sbjct: 156 SKRLAGINPCTETFTGTLQYMAPEVIDKGPRGYGAPADIWSLGCTIVEMATGKPPF--IE 213

Query: 118 NLEHLAMMERV 128
             E  A M +V
Sbjct: 214 LGEPQAAMFKV 224

Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4/MKK7 and MKK3/MKK6. It plays important roles in cytokine and stress responses, as well as in reactive oxygen species (ROS)-mediated cellular responses. ASK1 is implicated in various diseases mediated by oxidative stress including inschemic heart disease, hypertension, vessel injury, brain ischemia, Fanconi anemia, asthma, and pulmonary edema, among others. ASK2 (also called MAPKKK6) functions only in a heteromeric complex with ASK1, and can activate ASK1 by direct phosphorylation. The function of MAPKKK15 is still unknown. Length = 268

>gnl|CDD|173668 cd05577, STKc_GRK, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase

 Score = 52.9 bits (127), Expect = 3e-08
 Identities = 30/130 (23%), Positives = 50/130 (38%), Gaps = 31/130 (23%)

Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           +H   +++ DLKPENVLL     +++ D   ++                       G   
Sbjct: 111 LHQRRIVYRDLKPENVLLDDHGNVRISDLGLAVELKG-------------------GKKI 151

Query: 65  YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTH------EN 118
             R        T  Y APEV+ G  + +  D +++GC L E+  G + F+        E 
Sbjct: 152 KGR------AGTPGYMAPEVLQGEVYDFSVDWFALGCTLYEMIAGRSPFRQRKEKVEKEE 205

Query: 119 LEHLAMMERV 128
           L+   +   V
Sbjct: 206 LKRRTLEMAV 215

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of G protein signaling) homology (RH) domain and several motifs. The C-terminus diverges among different groups of GRKs. There are seven types of GRKs, named GRK1 to GRK7. They are subdivided into three main groups: visual (GRK1/7); beta-adrenergic receptor kinases (GRK2/3); and GRK4-like (GRK4/5/6). Expression of GRK2/3/5/6 is widespread while GRK1/4/7 show a limited tissue distribution. The substrate spectrum of the widely expressed GRKs partially overlaps. GRKs play important roles in the cardiovascular, immune, respiratory, skeletal, and nervous systems. Length = 277

>gnl|CDD|173761 cd08221, STKc_Nek9, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9

 Score = 52.8 bits (127), Expect = 3e-08
 Identities = 27/106 (25%), Positives = 48/106 (45%), Gaps = 24/106 (22%)

Query: 3   AVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGS 62
           + +H   ++H D+K  N+ L  +  IK+ D+  S    K       M ++          
Sbjct: 115 SYIHKAGILHRDIKTLNIFLTKAGLIKLGDFGIS----KILGSEYSMAET---------- 160

Query: 63  TTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT 108
                     +V T +Y +PE+  G+ + +  DIW++GC+L EL T
Sbjct: 161 ----------VVGTPYYMSPELCQGVKYNFKSDIWALGCVLYELLT 196

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associates with FACT (FAcilitates Chromatin Transcription) and modulates interphase progression. It also interacts with Nek6, and Nek7, during mitosis, resulting in their activation. Length = 256

>gnl|CDD|173700 cd05609, STKc_MAST, Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase

 Score = 52.9 bits (127), Expect = 3e-08
 Identities = 36/108 (33%), Positives = 54/108 (50%), Gaps = 15/108 (13%)

Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDY---KSSLHTPKDSSYFKRMPKSSAIKVIDFG 61
           +H+  ++H DLKP+N+L+ S  +IK+ D+   K  L +   + Y   + K          
Sbjct: 117 LHNYGIVHRDLKPDNLLITSMGHIKLTDFGLSKIGLMSLTTNLYEGHIEKD--------- 167

Query: 62  STTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG 109
             T E  D+  +  T  Y APEVIL  G+  P D W++G IL E   G
Sbjct: 168 --TREFLDKQ-VCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVG 212

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that are also expressed at neuromuscular junctions and postsynaptic densities. MAST1, MAST2, and MAST3 bind and phosphorylate the tumor suppressor PTEN, and may contribute to the regulation and stabilization of PTEN. MAST2 is involved in the regulation of the Fc-gamma receptor of the innate immune response in macrophages, and may also be involved in the regulation of the Na+/H+ exchanger NHE3. Length = 305

>gnl|CDD|173759 cd08219, STKc_Nek3, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3

 Score = 52.7 bits (126), Expect = 4e-08
 Identities = 38/133 (28%), Positives = 62/133 (46%), Gaps = 27/133 (20%)

Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           +H+  ++H D+K +N+ L  +  +K+ D+ S+       +Y                + T
Sbjct: 116 IHEKRVLHRDIKSKNIFLTQNGKVKLGDFGSARLLTSPGAY----------------ACT 159

Query: 65  YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTH--ENLEHL 122
           Y        V T +Y  PE+   + +    DIWS+GCIL ELCT +  FQ +  +NL  L
Sbjct: 160 Y--------VGTPYYVPPEIWENMPYNNKSDIWSLGCILYELCTLKHPFQANSWKNLI-L 210

Query: 123 AMMERVLGPLPQH 135
            + +    PLP H
Sbjct: 211 KVCQGSYKPLPSH 223

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activation of Vav2 and contributes to prolactin-mediated motility of breast cancer cells. Length = 255

>gnl|CDD|173716 cd05627, STKc_NDR2, Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2

 Score = 53.1 bits (127), Expect = 4e-08
 Identities = 35/127 (27%), Positives = 56/127 (44%), Gaps = 25/127 (19%)

Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPD---------------YKSSLHTPKDSSYFKRM 49
           +H L  IH D+KP+N+LL +  ++K+ D               Y++  H P     F+ M
Sbjct: 117 IHQLGFIHRDIKPDNLLLDAKGHVKLSDFGLCTGLKKAHRTEFYRNLTHNPPSDFSFQNM 176

Query: 50  PKSSAIKVIDFGSTTYERPDQNY---IVSTRHYRAPEVILGLGWTYPCDIWSVGCILVEL 106
                       + T+++  +      V T  Y APEV +  G+   CD WS+G I+ E+
Sbjct: 177 NSKRK-------AETWKKNRRQLAYSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEM 229

Query: 107 CTGEALF 113
             G   F
Sbjct: 230 LIGYPPF 236

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regulating neuronal growth and differentiation, as well as in facilitating neurite outgrowth. It is also implicated in fear conditioning as it contributes to the coupling of neuronal morphological changes with fear-memory consolidation. NDR2 is also referred to as STK38-like. Length = 360

>gnl|CDD|143375 cd07870, STKc_PFTAIRE2, Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase

 Score = 52.3 bits (125), Expect = 4e-08
 Identities = 60/249 (24%), Positives = 88/249 (35%), Gaps = 78/249 (31%)

Query: 2   FAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG 61
            A +H   ++H DLKP+N+L+                     SY         +K+ DFG
Sbjct: 116 LAYIHGQHILHRDLKPQNLLI---------------------SYL------GELKLADFG 148

Query: 62  -STTYERPDQNYI--VSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQ-TH 116
            +     P Q Y   V T  YR P+V+LG   ++   DIW  GCI +E+  G+  F    
Sbjct: 149 LARAKSIPSQTYSSEVVTLWYRPPDVLLGATDYSSALDIWGAGCIFIEMLQGQPAFPGVS 208

Query: 117 ENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQV 176
           +  E L  +  VLG   +                    WP           V KLP  + 
Sbjct: 209 DVFEQLEKIWTVLGVPTEDT------------------WP----------GVSKLPNYKP 240

Query: 177 PFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTA 236
            +F              R         + L              L   +L   P DR++A
Sbjct: 241 EWFLPC------KPQQLR------VVWKRL------SRPPKAEDLASQMLMMFPKDRISA 282

Query: 237 REALRHPFF 245
           ++AL HP+F
Sbjct: 283 QDALLHPYF 291

Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recessive form of juvenile ALS. The function of PFTAIRE-2 is not yet known. Length = 291

>gnl|CDD|173754 cd07865, STKc_CDK9, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9

 Score = 52.0 bits (125), Expect = 6e-08
 Identities = 53/249 (21%), Positives = 84/249 (33%), Gaps = 81/249 (32%)

Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG--- 61
           +H   ++H D+K  N+L+                            K   +K+ DFG   
Sbjct: 135 IHRNKILHRDMKAANILIT---------------------------KDGILKLADFGLAR 167

Query: 62  ----STTYERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTH 116
               S   +       V T  YR PE++LG   +  P D+W  GCI+ E+ T   + Q +
Sbjct: 168 AFSLSKNSKPNRYTNRVVTLWYRPPELLLGERDYGPPIDMWGAGCIMAEMWTRSPIMQGN 227

Query: 117 ENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQV 176
                L ++ ++ G +   +   VD+  E +                     M+LP+   
Sbjct: 228 TEQHQLTLISQLCGSITPEVWPGVDKL-ELF-------------------KKMELPQ--- 264

Query: 177 PFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTA 236
                            +  +        L     D  A D   L+  LL  DP  R+ A
Sbjct: 265 -------------GQKRKVKE-------RLKPYVKDPHALD---LIDKLLVLDPAKRIDA 301

Query: 237 REALRHPFF 245
             AL H FF
Sbjct: 302 DTALNHDFF 310

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multiple steps of gene expression including transcription elongation, mRNA synthesis, processing, export, and translation. It also plays a role in mediating cytokine induced transcription networks such as IL6-induced STAT3 signaling. In addition, the CDK9/cyclin T2a complex promotes muscle differentiation and enhances the function of some myogenic regulatory factors. Length = 310

>gnl|CDD|173717 cd05628, STKc_NDR1, Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1

 Score = 52.4 bits (125), Expect = 6e-08
 Identities = 36/120 (30%), Positives = 59/120 (49%), Gaps = 11/120 (9%)

Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYK--SSLHTPKDSSYFKRMPKS--SAIKVIDF 60
           +H L  IH D+KP+N+LL S  ++K+ D+   + L     + +++ +  S  S     + 
Sbjct: 117 IHQLGFIHRDIKPDNLLLDSKGHVKLSDFGLCTGLKKAHRTEFYRNLNHSLPSDFTFQNM 176

Query: 61  GST----TYERPDQNY---IVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALF 113
            S     T++R  +      V T  Y APEV +  G+   CD WS+G I+ E+  G   F
Sbjct: 177 NSKRKAETWKRNRRQLAFSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYPPF 236

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, muscle, lung and spleen. It is not an essential protein because mice deficient of NDR1 remain viable and fertile. However, these mice develop T-cell lymphomas and appear to be hypersenstive to carcinogenic treatment. NDR1 appears to act as a tumor suppressor. NDR1 is also called STK38. Length = 363

>gnl|CDD|173692 cd05601, STKc_CRIK, Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase

 Score = 51.7 bits (124), Expect = 8e-08
 Identities = 32/115 (27%), Positives = 50/115 (43%), Gaps = 29/115 (25%)

Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           +H +  +H D+KPENVL+  + +IK+ D+ S+     +     ++P              
Sbjct: 118 VHQMGYVHRDIKPENVLIDRTGHIKLADFGSAARLTANKMVNSKLP-------------- 163

Query: 65  YERPDQNYIVSTRHYRAPEVILGL----GWTY--PCDIWSVGCILVELCTGEALF 113
                    V T  Y APEV+  +      TY   CD WS+G I  E+  G + F
Sbjct: 164 ---------VGTPDYIAPEVLTTMNGDGKGTYGVECDWWSLGVIAYEMIYGRSPF 209

Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnormal cytokinesis and massive apoptosis in neuronal precursors. A Down syndrome critical region protein TTC3 interacts with CRIK and inhibits CRIK-dependent neuronal differentiation and neurite extension. Length = 330

>gnl|CDD|143377 cd07872, STKc_PCTAIRE2, Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase

 Score = 51.5 bits (123), Expect = 9e-08
 Identities = 58/245 (23%), Positives = 95/245 (38%), Gaps = 73/245 (29%)

Query: 2   FAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG 61
            A  H   ++H DLKP+N+L+     +K+ D+          +  K +P           
Sbjct: 117 LAYCHRRKVLHRDLKPQNLLINERGELKLADF--------GLARAKSVP----------- 157

Query: 62  STTYERPDQNYIVSTRHYRAPEVILGLG-WTYPCDIWSVGCILVELCTGEALFQTHENLE 120
           + TY        V T  YR P+V+LG   ++   D+W VGCI  E+ +G  LF      +
Sbjct: 158 TKTYSNE-----VVTLWYRPPDVLLGSSEYSTQIDMWGVGCIFFEMASGRPLFPGSTVED 212

Query: 121 HLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVPFFY 180
            L ++ R+LG   +                    WP G +S +  K+             
Sbjct: 213 ELHLIFRLLGTPTEE------------------TWP-GISSNDEFKNY------------ 241

Query: 181 GSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREAL 240
            +F ++K                Q LI  H      +   LL   L+Y+   R++A EA+
Sbjct: 242 -NFPKYKP---------------QPLI-NHAPRLDTEGIELLTKFLQYESKKRISAEEAM 284

Query: 241 RHPFF 245
           +H +F
Sbjct: 285 KHAYF 289

Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play a role in regulating mitochondrial function in neurons. Length = 309

>gnl|CDD|173770 cd08528, STKc_Nek10, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10

 Score = 51.3 bits (123), Expect = 9e-08
 Identities = 33/131 (25%), Positives = 56/131 (42%), Gaps = 32/131 (24%)

Query: 10  MIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD 69
           ++H DL P N++L   +                            + + DFG    ++P+
Sbjct: 135 IVHRDLTPNNIMLGEDD---------------------------KVTITDFGLAKQKQPE 167

Query: 70  QNY--IVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAM--M 125
                +V T  Y  PE++    +    D+W+ GCIL ++CT +  F +  N+  LA   +
Sbjct: 168 SKLTSVVGTILYSCPEIVKNEPYGEKADVWAFGCILYQMCTLQPPFYS-TNMLSLATKIV 226

Query: 126 ERVLGPLPQHM 136
           E V  PLP+ M
Sbjct: 227 EAVYEPLPEGM 237

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24. Length = 269

>gnl|CDD|132963 cd06632, STKc_MEKK1_plant, Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1

 Score = 50.5 bits (121), Expect = 2e-07
 Identities = 26/108 (24%), Positives = 45/108 (41%), Gaps = 26/108 (24%)

Query: 3   AVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGS 62
             +HD   +H D+K  N+L+ ++  +K+ D+  +              KS          
Sbjct: 116 EYLHDRNTVHRDIKGANILVDTNGVVKLADFGMAKQ-----VVEFSFAKS---------- 160

Query: 63  TTYERPDQNYIVSTRHYRAPEVILGLG-WTYPCDIWSVGCILVELCTG 109
                        + ++ APEVI   G +    DIWS+GC ++E+ TG
Sbjct: 161 ----------FKGSPYWMAPEVIAQQGGYGLAADIWSLGCTVLEMATG 198

Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidopsis thaliana MEKK1 activates MPK4, a MAPK that regulates systemic acquired resistance. MEKK1 also participates in the regulation of temperature-sensitive and tissue-specific cell death. Length = 258

>gnl|CDD|173676 cd05585, STKc_YPK1_like, Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases

 Score = 50.7 bits (121), Expect = 2e-07
 Identities = 34/108 (31%), Positives = 47/108 (43%), Gaps = 30/108 (27%)

Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           +H   +I+ DLKPEN+LL         DY+                    I + DFG   
Sbjct: 109 LHKFNVIYRDLKPENILL---------DYQGH------------------IALCDFGLCK 141

Query: 65  YERPDQ---NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG 109
               D    N    T  Y APE++LG G+T   D W++G +L E+ TG
Sbjct: 142 LNMKDDDKTNTFCGTPEYLAPELLLGHGYTKAVDWWTLGVLLYEMLTG 189

Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It plays a role in cell growth and sexual development. Length = 312

>gnl|CDD|132962 cd06631, STKc_YSK4, Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4

 Score = 49.9 bits (119), Expect = 3e-07
 Identities = 36/138 (26%), Positives = 59/138 (42%), Gaps = 32/138 (23%)

Query: 3   AVMHDLCMIHTDLKPENVLLVSSEYIKVPDYK-------SSLHTPKDSSYFKRMPKSSAI 55
           A +H+ C++H D+K  NV+L+ +  IK+ D+          LH    S+  K M      
Sbjct: 116 AYLHNNCVVHRDIKGNNVMLMPNGIIKLIDFGCARRLAWVGLHGTH-SNMLKSMH----- 169

Query: 56  KVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQT 115
                               T ++ APEVI   G+    DIWS+GC + E+ TG+    +
Sbjct: 170 -------------------GTPYWMAPEVINESGYGRKSDIWSIGCTVFEMATGKPPLAS 210

Query: 116 HENLEHLAMMERVLGPLP 133
            + L  +  +    G +P
Sbjct: 211 MDRLAAMFYIGAHRGLMP 228

Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Length = 265

>gnl|CDD|173726 cd06610, STKc_OSR1_SPAK, Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase

 Score = 49.7 bits (119), Expect = 3e-07
 Identities = 32/123 (26%), Positives = 50/123 (40%), Gaps = 25/123 (20%)

Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDY--KSSLHTPKDSSYFKRMPKSSAIKVIDFGS 62
           +H    IH D+K  N+LL     +K+ D+   +SL    D +   R              
Sbjct: 118 LHSNGQIHRDIKAGNILLGEDGSVKIADFGVSASLADGGDRTRKVR-------------- 163

Query: 63  TTYERPDQNYIVSTRHYRAPEVI-LGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEH 121
                      V T  + APEV+    G+ +  DIWS G   +EL TG A +  +  ++ 
Sbjct: 164 --------KTFVGTPCWMAPEVMEQVHGYDFKADIWSFGITAIELATGAAPYSKYPPMKV 215

Query: 122 LAM 124
           L +
Sbjct: 216 LML 218

Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1 and SPAK contain a conserved C-terminal (CCT) domain, which recognizes a unique motif ([RK]FX[VI]) present in their activating kinases (WNK1/WNK4) and their substrates. Length = 267

>gnl|CDD|173665 cd05574, STKc_phototropin_like, Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases

 Score = 50.0 bits (120), Expect = 3e-07
 Identities = 37/116 (31%), Positives = 52/116 (44%), Gaps = 9/116 (7%)

Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTP-------KDSSYFKRMPKSSAIKV 57
           +H L +++ DLKPEN+LL  S +I + D+  S  +        K      R    ++I  
Sbjct: 119 LHLLGIVYRDLKPENILLHESGHIMLSDFDLSKQSDVEPPPVSKALRKGSRRSSVNSIPS 178

Query: 58  IDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALF 113
             F      R   N  V T  Y APEVI G G     D W++G +L E+  G   F
Sbjct: 179 ETFSEEPSFR--SNSFVGTEEYIAPEVISGDGHGSAVDWWTLGILLYEMLYGTTPF 232

Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-terminal photosensory domain and a C-terminal catalytic domain. The N-terminal domain contains two LOV (Light, Oxygen or Voltage) domains that binds FMN. Photoexcitation of the LOV domains results in autophosphorylation at multiple sites and activation of the catalytic domain. Neurospora crassa nrc-2 plays a role in growth and development by controlling entry into the conidiation program. Length = 316

>gnl|CDD|173720 cd05631, STKc_GRK4, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4

 Score = 49.2 bits (117), Expect = 5e-07
 Identities = 30/108 (27%), Positives = 50/108 (46%), Gaps = 25/108 (23%)

Query: 10  MIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD 69
           +++ DLKPEN+LL    +I++ D   ++  P+                   G T   R  
Sbjct: 123 IVYRDLKPENILLDDRGHIRISDLGLAVQIPE-------------------GETVRGR-- 161

Query: 70  QNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHE 117
               V T  Y APEVI    +T+  D W +GC++ E+  G++ F+  +
Sbjct: 162 ----VGTVGYMAPEVINNEKYTFSPDWWGLGCLIYEMIQGQSPFRKRK 205

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found in the testis, but is also present in the cerebellum and kidney. It is expressed as multiple splice variants with different domain architectures. It is post-translationally palmitoylated and localized in the membrane. GRK4 polymorphisms are associated with hypertension and salt sensitivity, as they cause hyperphosphorylation, desensitization, and internalization of the dopamine 1 (D1) receptor while increasing the expression of the angiotensin II type 1 receptor. GRK4 plays a crucial role in the D1 receptor regulation of sodium excretion and blood pressure. Length = 285

>gnl|CDD|132982 cd06651, STKc_MEKK3, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3

 Score = 48.5 bits (115), Expect = 9e-07
 Identities = 40/174 (22%), Positives = 78/174 (44%), Gaps = 31/174 (17%)

Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           +H   ++H D+K  N+L  S+  +K+ D+ +S          KR+      + I    T 
Sbjct: 122 LHSNMIVHRDIKGANILRDSAGNVKLGDFGAS----------KRL------QTICMSGTG 165

Query: 65  YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAM 124
                   +  T ++ +PEVI G G+    D+WS+GC +VE+ T +  +  +E +  +  
Sbjct: 166 IRS-----VTGTPYWMSPEVISGEGYGRKADVWSLGCTVVEMLTEKPPWAEYEAMAAIFK 220

Query: 125 M--ERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQV 176
           +  +     LP H    +  HA  ++    ++    A  R S + +++ P  Q+
Sbjct: 221 IATQPTNPQLPSH----ISEHARDFLGCIFVE----ARHRPSAEELLRHPFAQL 266

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. In addition, MEKK3 is involved in interleukin-1 receptor and Toll-like receptor 4 signaling. It is also a specific regulator of the proinflammatory cytokines IL-6 and GM-CSF in some immune cells. MEKK3 also regulates calcineurin, which plays a critical role in T cell activation, apoptosis, skeletal myocyte differentiation, and cardiac hypertrophy. Length = 266

>gnl|CDD|143359 cd07854, STKc_MAPK4_6, Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6

 Score = 48.6 bits (116), Expect = 1e-06
 Identities = 35/136 (25%), Positives = 59/136 (43%), Gaps = 36/136 (26%)

Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           +H   ++H DLKP NV + + + +                          +K+ DFG   
Sbjct: 130 IHSANVLHRDLKPANVFINTEDLV--------------------------LKIGDFGLAR 163

Query: 65  YERPD---QNYI---VSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHE 117
              P    + Y+   + T+ YR+P ++L    +T   D+W+ GCI  E+ TG+ LF    
Sbjct: 164 IVDPHYSHKGYLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKPLFAGAH 223

Query: 118 NLEHLAMMERVLGPLP 133
            LE    M+ +L  +P
Sbjct: 224 ELE---QMQLILESVP 236

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progression in certain conditions. It may also play a role in glucose-induced insulin secretion. MAPK6 and MAPK4 cooperate to regulate the activity of MAPK-activated protein kinase 5 (MK5), leading to its relocation to the cytoplasm and exclusion from the nucleus. The MAPK6/MK5 and MAPK4/MK5 pathways may play critical roles in embryonic and post-natal development. Length = 342

>gnl|CDD|173687 cd05596, STKc_ROCK, Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase

 Score = 48.2 bits (115), Expect = 1e-06
 Identities = 31/115 (26%), Positives = 51/115 (44%), Gaps = 27/115 (23%)

Query: 3   AVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGS 62
             +H +  IH D+KP+N+LL  S ++K+ D+ + +          +M  +  ++      
Sbjct: 156 DAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCM----------KMDANGMVRC----D 201

Query: 63  TTYERPDQNYIVSTRHYRAPEVILGLG----WTYPCDIWSVGCILVELCTGEALF 113
           T    PD         Y +PEV+   G    +   CD WSVG  L E+  G+  F
Sbjct: 202 TAVGTPD---------YISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPF 247

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via interaction with Rho GTPases and is involved in many cellular functions including contraction, adhesion, migration, motility, proliferation, and apoptosis. The ROCK subfamily consists of two isoforms, ROCK1 and ROCK2, which may be functionally redundant in some systems, but exhibit different tissue distributions. Both isoforms are ubiquitously expressed in most tissues, but ROCK2 is more prominent in brain and skeletal muscle while ROCK1 is more pronounced in the liver, testes, and kidney. Studies in knockout mice result in different phenotypes, suggesting that the two isoforms do not compensate for each other during embryonic development. Length = 370

>gnl|CDD|173732 cd06628, STKc_MAPKKK_Byr2_like, Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases

 Score = 47.9 bits (114), Expect = 1e-06
 Identities = 31/105 (29%), Positives = 52/105 (49%), Gaps = 18/105 (17%)

Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           +H+  +IH D+K  N+L+ +   IK+ D+  S          K++  +S         T 
Sbjct: 122 LHNRGIIHRDIKGANILVDNKGGIKISDFGIS----------KKLEANSLS-----TKTN 166

Query: 65  YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG 109
             RP    +  +  + APEV+    +T   DIWS+GC++VE+ TG
Sbjct: 167 GARPS---LQGSVFWMAPEVVKQTSYTRKADIWSLGCLVVEMLTG 208

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast Byr2 is regulated by Ras1. It responds to pheromone signaling and controls mating through the MAPK pathway. Budding yeast Ste11 functions in MAPK cascades that regulate mating, high osmolarity glycerol, and filamentous growth responses. Length = 267

>gnl|CDD|143374 cd07869, STKc_PFTAIRE1, Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase

 Score = 48.2 bits (114), Expect = 1e-06
 Identities = 56/246 (22%), Positives = 98/246 (39%), Gaps = 70/246 (28%)

Query: 2   FAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG 61
            + +H   ++H DLKP+N+L+  +  +K+ D+               + ++ ++      
Sbjct: 116 LSYIHQRYILHRDLKPQNLLISDTGELKLADFG--------------LARAKSVP----- 156

Query: 62  STTYERPDQNYIVSTRHYRAPEVILGLGWTYPC-DIWSVGCILVELCTGEALFQTHENLE 120
           S TY        V T  YR P+V+LG      C D+W VGCI VE+  G A F   ++++
Sbjct: 157 SHTYSNE-----VVTLWYRPPDVLLGSTEYSTCLDMWGVGCIFVEMIQGVAAFPGMKDIQ 211

Query: 121 HLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVPFFY 180
               +ER+   L                         G  + ++   V  LP  +   F 
Sbjct: 212 D--QLERIFLVL-------------------------GTPNEDTWPGVHSLPHFKPERF- 243

Query: 181 GSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREAL 240
            +    K    A+              + +V+H+      L   LL+  P +RL+A+ AL
Sbjct: 244 -TLYSPKNLRQAWN------------KLSYVNHA----EDLASKLLQCFPKNRLSAQAAL 286

Query: 241 RHPFFT 246
            H +F+
Sbjct: 287 SHEYFS 292

Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 and is inhibited by the p21 cell cycle inhibitor. It has also been shown to interact with the membrane-associated cyclin Y, which recruits the protein to the plasma membrane. Length = 303

>gnl|CDD|173698 cd05607, STKc_GRK7, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7

 Score = 47.6 bits (113), Expect = 2e-06
 Identities = 27/113 (23%), Positives = 49/113 (43%), Gaps = 25/113 (22%)

Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           +H + +++ D+KPENVLL      ++ D   ++                       G T 
Sbjct: 111 LHSMDIVYRDMKPENVLLDDQGNCRLSDLGLAVELKD-------------------GKTI 151

Query: 65  YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHE 117
            +R        T  Y APE++    ++YP D +++GC + E+  G   F+ H+
Sbjct: 152 TQR------AGTNGYMAPEILKEEPYSYPVDWFAMGCSIYEMVAGRTPFKDHK 198

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual group of GRKs. It is primarily found in the retina and plays a role in the regulation of opsin light receptors. GRK7 is located in retinal cone outer segments and plays an important role in regulating photoresponse of the cones. Length = 277

>gnl|CDD|132946 cd06615, PKc_MEK, Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase

 Score = 47.8 bits (114), Expect = 2e-06
 Identities = 32/102 (31%), Positives = 44/102 (43%), Gaps = 30/102 (29%)

Query: 10  MIHTDLKPENVLLVSSEYIKVPDYKSS--LHTPKDSSYFKRMPKSSAIKVIDFGSTTYER 67
           ++H D+KP N+L+ S   IK+ D+  S  L    DS                        
Sbjct: 121 IMHRDVKPSNILVNSRGEIKLCDFGVSGQLI---DSM----------------------- 154

Query: 68  PDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG 109
              N  V TR Y +PE + G  +T   DIWS+G  LVE+  G
Sbjct: 155 --ANSFVGTRSYMSPERLQGTHYTVQSDIWSLGLSLVEMAIG 194

Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the downstream targets, ERK(extracellular signal-regulated kinase) 1 and ERK2, on specific threonine and tyrosine residues. The ERK cascade starts with extracellular signals including growth factors, hormones, and neurotransmitters, which act through receptors and ion channels to initiate intracellular signaling that leads to the activation at the MAPKKK (Raf-1 or MOS) level, which leads to the transmission of signals to MEK1/2, and finally to ERK1/2. The ERK cascade plays an important role in cell proliferation, differentiation, oncogenic transformation, and cell cycle control, as well as in apoptosis and cell survival under certain conditions. This cascade has also been implicated in synaptic plasticity, migration, morphological determination, and stress response immunological reactions. Gain-of-function mutations in genes encoding ERK cascade proteins, including MEK1/2, cause cardiofaciocutaneous (CFC) syndrome, a condition leading to multiple congenital anomalies and mental retardation in patients. Length = 308

>gnl|CDD|173696 cd05605, STKc_GRK4_like, Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases

 Score = 47.5 bits (113), Expect = 2e-06
 Identities = 30/110 (27%), Positives = 51/110 (46%), Gaps = 25/110 (22%)

Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           +H   +++ DLKPEN+LL    +I++ D   ++  P+                   G T 
Sbjct: 118 LHRERIVYRDLKPENILLDDYGHIRISDLGLAVEIPE-------------------GETI 158

Query: 65  YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQ 114
             R      V T  Y APEV+    +T+  D W +GC++ E+  G++ F+
Sbjct: 159 RGR------VGTVGYMAPEVVKNERYTFSPDWWGLGCLIYEMIEGKSPFR 202

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5, GRK6, and similar GRKs. GRKs in this group contain an N-terminal RGS homology (RH) domain and a catalytic domain, but lack a G protein betagamma-subunit binding domain. They are localized to the plasma membrane through post-translational lipid modification or direct binding to PIP2. Length = 285

>gnl|CDD|132983 cd06652, STKc_MEKK2, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2

 Score = 47.3 bits (112), Expect = 2e-06
 Identities = 37/146 (25%), Positives = 65/146 (44%), Gaps = 23/146 (15%)

Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           +H   ++H D+K  N+L  S   +K+ D+ +S          KR+      + I    T 
Sbjct: 122 LHSNMIVHRDIKGANILRDSVGNVKLGDFGAS----------KRL------QTICLSGTG 165

Query: 65  YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAM 124
            +      +  T ++ +PEVI G G+    DIWSVGC +VE+ T +  +   E +   A+
Sbjct: 166 MKS-----VTGTPYWMSPEVISGEGYGRKADIWSVGCTVVEMLTEKPPWAEFEAMA--AI 218

Query: 125 MERVLGPLPQHMLKRVDRHAEKYVRR 150
            +    P    +   V  H   +++R
Sbjct: 219 FKIATQPTNPVLPPHVSDHCRDFLKR 244

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their respective MAPKKs MEK1/2, JNK-activating kinase 2 (JNKK2), and MKK3/6. MEKK2 plays roles in T cell receptor signaling, immune synapse formation, cytokine gene expression, as well as in EGF and FGF receptor signaling. Length = 265

>gnl|CDD|132938 cd06607, STKc_TAO, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins

 Score = 47.5 bits (113), Expect = 2e-06
 Identities = 29/107 (27%), Positives = 45/107 (42%), Gaps = 31/107 (28%)

Query: 3   AVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGS 62
           A +H    IH D+K  N+LL                            +   +K+ DFGS
Sbjct: 129 AYLHSHERIHRDIKAGNILLT---------------------------EPGTVKLADFGS 161

Query: 63  TTYERPDQNYIVSTRHYRAPEVILGLG---WTYPCDIWSVGCILVEL 106
            +   P  ++ V T ++ APEVIL +    +    D+WS+G   +EL
Sbjct: 162 ASLVSPANSF-VGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIEL 207

Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily members, named TAO1, TAO2, and TAO3. Length = 307

>gnl|CDD|173616 PTZ00426, PTZ00426, cAMP-dependent protein kinase catalytic subunit; Provisional

 Score = 47.7 bits (113), Expect = 2e-06
 Identities = 38/150 (25%), Positives = 66/150 (44%), Gaps = 34/150 (22%)

Query: 1   MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDF 60
           +F  +  L +++ DLKPEN+LL    +IK+ D+  +                   KV+D 
Sbjct: 143 IFEYLQSLNIVYRDLKPENLLLDKDGFIKMTDFGFA-------------------KVVD- 182

Query: 61  GSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG-------EALF 113
            + TY       +  T  Y APE++L +G     D W++G  + E+  G       E L 
Sbjct: 183 -TRTYT------LCGTPEYIAPEILLNVGHGKAADWWTLGIFIYEILVGCPPFYANEPLL 235

Query: 114 QTHENLEHLAMMERVLGPLPQHMLKRVDRH 143
              + LE +    + L    +H++K++  H
Sbjct: 236 IYQKILEGIIYFPKFLDNNCKHLMKKLLSH 265

Length = 340

>gnl|CDD|173721 cd05632, STKc_GRK5, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5

 Score = 47.3 bits (112), Expect = 2e-06
 Identities = 29/110 (26%), Positives = 48/110 (43%), Gaps = 25/110 (22%)

Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           +H    ++ DLKPEN+LL    +I++ D   ++  P+  S   R                
Sbjct: 118 LHRENTVYRDLKPENILLDDYGHIRISDLGLAVKIPEGESIRGR---------------- 161

Query: 65  YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQ 114
                    V T  Y APEV+    +T   D W +GC++ E+  G++ F+
Sbjct: 162 ---------VGTVGYMAPEVLNNQRYTLSPDYWGLGCLIYEMIEGQSPFR 202

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with the membrane though an N-terminal PIP2 binding domain and also binds phospholipids via its C-terminus. GRK5 deficiency is associated with early Alzheimer's disease in humans and mouse models. GRK5 also plays a crucial role in the pathogenesis of sporadic Parkinson's disease. It participates in the regulation and desensitization of PDGFRbeta, a receptor tyrosine kinase involved in a variety of downstream cellular effects including cell growth, chemotaxis, apoptosis, and angiogenesis. GRK5 also regulates Toll-like receptor 4, which is involved in innate and adaptive immunity. Length = 285

>gnl|CDD|132988 cd06657, STKc_PAK4, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4

 Score = 46.9 bits (111), Expect = 3e-06
 Identities = 41/173 (23%), Positives = 76/173 (43%), Gaps = 28/173 (16%)

Query: 2   FAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG 61
            +V+H   +IH D+K +++LL     +K+ D+       K                    
Sbjct: 129 LSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSK-------------------- 168

Query: 62  STTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEH 121
               E P +  +V T ++ APE+I  L +    DIWS+G +++E+  GE  +     L+ 
Sbjct: 169 ----EVPRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKA 224

Query: 122 LAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRL 174
           + M+   L P  ++ L +V    + ++ R  +  P   A R +   ++K P L
Sbjct: 225 MKMIRDNLPPKLKN-LHKVSPSLKGFLDRLLVRDP---AQRATAAELLKHPFL 273

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell morphology and cytoskeletal organization. It is essential for embryonic viability and proper neural development. Mice lacking PAK4 die due to defects in the fetal heart. In addition, their spinal cord motor neurons showed failure to differentiate and migrate. PAK4 also plays a role in cell survival and tumorigenesis. It is overexpressed in many primary tumors including colon, esophageal, and mammary tumors. PAK4 has also been implicated in viral and bacterial infection pathways. Length = 292

>gnl|CDD|173764 cd08224, STKc_Nek6_Nek7, Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7

 Score = 47.0 bits (112), Expect = 3e-06
 Identities = 29/102 (28%), Positives = 46/102 (45%), Gaps = 24/102 (23%)

Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           MH   ++H D+KP NV + ++  +K+ D               R           F S T
Sbjct: 122 MHSKRIMHRDIKPANVFITATGVVKLGDLG-----------LGRF----------FSSKT 160

Query: 65  YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVEL 106
                 + +V T +Y +PE I   G+ +  DIWS+GC+L E+
Sbjct: 161 TA---AHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEM 199

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may also be regulators of the p70 ribosomal S6 kinase. Length = 267

>gnl|CDD|173763 cd08223, STKc_Nek4, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4

 Score = 46.9 bits (111), Expect = 3e-06
 Identities = 41/169 (24%), Positives = 74/169 (43%), Gaps = 32/169 (18%)

Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           +H+  ++H DLK +NV L  +  IKV D               R+ ++      D  ST 
Sbjct: 118 LHEKHILHRDLKTQNVFLTRTNIIKVGDLG-----------IARVLENQC----DMAST- 161

Query: 65  YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAM 124
                   ++ T +Y +PE+     + Y  D+W++GC + E+ T +  F      +  ++
Sbjct: 162 --------LIGTPYYMSPELFSNKPYNYKSDVWALGCCVYEMATLKHAFNAK---DMNSL 210

Query: 125 MERVL-GPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLP 172
           + R++ G LP  M K       + +       PE    R S+KS+++ P
Sbjct: 211 VYRIIEGKLPP-MPKDYSPELGELIATMLSKRPE---KRPSVKSILRQP 255

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown. Length = 257

>gnl|CDD|173502 PTZ00266, PTZ00266, NIMA-related protein kinase; Provisional

 Score = 47.4 bits (112), Expect = 3e-06
 Identities = 34/117 (29%), Positives = 57/117 (48%), Gaps = 14/117 (11%)

Query: 10  MIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD 69
           ++H DLKP+N+ L  S  I+        H  K ++    +      K+ DFG +     +
Sbjct: 146 VLHRDLKPQNIFL--STGIR--------HIGKITAQANNLNGRPIAKIGDFGLSKNIGIE 195

Query: 70  Q--NYIVSTRHYRAPEVILGLGWTY--PCDIWSVGCILVELCTGEALFQTHENLEHL 122
              +  V T +Y +PE++L    +Y    D+W++GCI+ ELC+G+  F    N   L
Sbjct: 196 SMAHSCVGTPYYWSPELLLHETKSYDDKSDMWALGCIIYELCSGKTPFHKANNFSQL 252

Length = 1021

>gnl|CDD|214567 smart00220, S_TKc, Serine/Threonine protein kinases, catalytic domain

 Score = 46.4 bits (111), Expect = 4e-06
 Identities = 16/29 (55%), Positives = 20/29 (68%)

Query: 217 DLTHLLQGLLRYDPTDRLTAREALRHPFF 245
           +   L++ LL  DP  RLTA EAL+HPFF
Sbjct: 226 EAKDLIRKLLVKDPEKRLTAEEALQHPFF 254

Phosphotransferases. Serine or threonine-specific kinase subfamily. Length = 254

>gnl|CDD|132951 cd06620, PKc_MAPKK_Byr1_like, Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases

 Score = 46.7 bits (111), Expect = 4e-06
 Identities = 29/104 (27%), Positives = 48/104 (46%), Gaps = 26/104 (25%)

Query: 10  MIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD 69
           ++H D+KP N+L+ S   IK+ D+  S                   ++I+  + T+    
Sbjct: 125 IMHRDIKPSNILVNSRGQIKLCDFGVSG------------------ELINSIADTF---- 162

Query: 70  QNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALF 113
               V T  Y +PE I G  +T   D+WS+G  ++EL  G+  F
Sbjct: 163 ----VGTSTYMSPERIQGGKYTVKSDVWSLGISIIELALGKFPF 202

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Byr1 from Schizosaccharomyces pombe, FUZ7 from Ustilago maydis, and related proteins. Byr1 phosphorylates its downstream target, the MAPK Spk1, and is regulated by the MAPKKK Byr2. The Spk1 cascade is pheromone-responsive and is essential for sporulation and sexual differentiation in fission yeast. FUZ7 phosphorylates and activates its target, the MAPK Crk1, which is required in mating and virulence in U. maydis. Length = 284

>gnl|CDD|173712 cd05622, STKc_ROCK1, Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1

 Score = 46.5 bits (110), Expect = 5e-06
 Identities = 31/113 (27%), Positives = 51/113 (45%), Gaps = 27/113 (23%)

Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           +H +  IH D+KP+N+LL  S ++K+ D+ + +          +M K   ++        
Sbjct: 158 IHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCM----------KMNKEGMVRC------- 200

Query: 65  YERPDQNYIVSTRHYRAPEVILGLG----WTYPCDIWSVGCILVELCTGEALF 113
                 +  V T  Y +PEV+   G    +   CD WSVG  L E+  G+  F
Sbjct: 201 ------DTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPF 247

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, and kidney. It mediates signaling from Rho to the actin cytoskeleton. It is implicated in the development of cardiac fibrosis, cardiomyocyte apoptosis, and hyperglycemia. Mice deficient with ROCK1 display eyelids open at birth (EOB) and omphalocele phenotypes due to the disorganization of actin filaments in the eyelids and the umbilical ring. Length = 371

>gnl|CDD|173760 cd08220, STKc_Nek8, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8

 Score = 46.0 bits (109), Expect = 5e-06
 Identities = 34/134 (25%), Positives = 57/134 (42%), Gaps = 29/134 (21%)

Query: 5   MHDLCMIHTDLKPENVLLVSSEYI-KVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGST 63
           +H   ++H DLK +N+LL   + + K+ D+  S                   K++   S 
Sbjct: 117 VHTKLILHRDLKTQNILLDKHKMVVKIGDFGIS-------------------KILSSKSK 157

Query: 64  TYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLA 123
            Y       +V T  Y +PE+  G  +    DIW++GC+L EL + +  F+   NL  L 
Sbjct: 158 AYT------VVGTPCYISPELCEGKPYNQKSDIWALGCVLYELASLKRAFEA-ANLPALV 210

Query: 124 M--MERVLGPLPQH 135
           +  M     P+   
Sbjct: 211 LKIMSGTFAPISDR 224

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with a rare form of juvenile renal cystic disease, nephronophthisis type 9. It has been suggested that a defect in the ciliary localization of Nek8 contributes to the development of cysts manifested by these diseases. Length = 256

>gnl|CDD|140289 PTZ00263, PTZ00263, protein kinase A catalytic subunit; Provisional

 Score = 46.3 bits (110), Expect = 5e-06
 Identities = 33/125 (26%), Positives = 54/125 (43%), Gaps = 35/125 (28%)

Query: 2   FAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG 61
           F  +H   +I+ DLKPEN+LL +  ++KV D+           + K++            
Sbjct: 131 FEYLHSKDIIYRDLKPENLLLDNKGHVKVTDF----------GFAKKV------------ 168

Query: 62  STTYERPDQNY-IVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG------EALFQ 114
                 PD+ + +  T  Y APEVI   G     D W++G +L E   G      +  F+
Sbjct: 169 ------PDRTFTLCGTPEYLAPEVIQSKGHGKAVDWWTMGVLLYEFIAGYPPFFDDTPFR 222

Query: 115 THENL 119
            +E +
Sbjct: 223 IYEKI 227

Length = 329

>gnl|CDD|132964 cd06633, STKc_TAO3, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3

 Score = 46.2 bits (109), Expect = 7e-06
 Identities = 31/108 (28%), Positives = 45/108 (41%), Gaps = 31/108 (28%)

Query: 2   FAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG 61
            A +H   MIH D+K  N+LL                            +   +K+ DFG
Sbjct: 134 LAYLHSHNMIHRDIKAGNILLT---------------------------EPGQVKLADFG 166

Query: 62  STTYERPDQNYIVSTRHYRAPEVILGLG---WTYPCDIWSVGCILVEL 106
           S +   P  N  V T ++ APEVIL +    +    D+WS+G   +EL
Sbjct: 167 SASKSSP-ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIEL 213

Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a component of the RAM (regulation of Ace2p activity and cellular morphogenesis) signaling pathway. TAO3 is upregulated in retinal ganglion cells after axotomy, and may play a role in apoptosis. Length = 313

>gnl|CDD|173677 cd05586, STKc_Sck1_like, Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases

 Score = 46.1 bits (109), Expect = 7e-06
 Identities = 33/110 (30%), Positives = 51/110 (46%), Gaps = 25/110 (22%)

Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           +H   +++ DLKPEN+LL ++ +I + D+  S     D+                   TT
Sbjct: 112 LHKYDIVYRDLKPENILLDATGHIALCDFGLSKANLTDN------------------KTT 153

Query: 65  YERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALF 113
                 N    T  Y APEV+L   G+T   D WS+G ++ E+C G + F
Sbjct: 154 ------NTFCGTTEYLAPEVLLDEKGYTKHVDFWSLGVLVFEMCCGWSPF 197

Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of yeast to environmental changes. Length = 330

>gnl|CDD|173669 cd05578, STKc_Yank1, Catalytic domain of the Protein Serine/Threonine Kinase, Yank1

 Score = 45.4 bits (108), Expect = 9e-06
 Identities = 26/114 (22%), Positives = 46/114 (40%), Gaps = 25/114 (21%)

Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           +H   +IH D+KP+N+LL    ++ + D+  +     D+                  +T+
Sbjct: 116 LHSKGIIHRDIKPDNILLDEQGHVHITDFNIATKVTPDTL-----------------TTS 158

Query: 65  YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHEN 118
                      T  Y APEV+   G++   D WS+G    E   G+  ++ H  
Sbjct: 159 T--------SGTPGYMAPEVLCRQGYSVAVDWWSLGVTAYECLRGKRPYRGHSR 204

Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A. Length = 258

>gnl|CDD|173765 cd08225, STKc_Nek5, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5

 Score = 45.3 bits (107), Expect = 9e-06
 Identities = 31/121 (25%), Positives = 52/121 (42%), Gaps = 26/121 (21%)

Query: 5   MHDLCMIHTDLKPENVLLVSSEYI-KVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGST 63
           +HD  ++H D+K +N+ L  +  + K+ D+  +     DS                    
Sbjct: 117 IHDRKILHRDIKSQNIFLSKNGMVAKLGDFGIA-RQLNDSMELAYT-------------- 161

Query: 64  TYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLA 123
                     V T +Y +PE+     +    DIWS+GC+L ELCT +  F+ + NL  L 
Sbjct: 162 ---------CVGTPYYLSPEICQNRPYNNKTDIWSLGCVLYELCTLKHPFEGN-NLHQLV 211

Query: 124 M 124
           +
Sbjct: 212 L 212

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown. Length = 257

>gnl|CDD|173713 cd05624, STKc_MRCK_beta, Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta

 Score = 45.4 bits (107), Expect = 1e-05
 Identities = 35/121 (28%), Positives = 55/121 (45%), Gaps = 28/121 (23%)

Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           +H L  +H D+KP+NVLL  + +I++ D+ S L   +D +      +SS           
Sbjct: 118 IHQLHYVHRDIKPDNVLLDMNGHIRLADFGSCLKMNQDGTV-----QSSV---------- 162

Query: 65  YERPDQNYIVSTRHYRAPEVIL----GLGWTYP-CDIWSVGCILVELCTGEALFQTHENL 119
                    V T  Y +PE++     G+G   P CD WS+G  + E+  GE  F     +
Sbjct: 163 --------AVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLV 214

Query: 120 E 120
           E
Sbjct: 215 E 215

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues. Length = 331

>gnl|CDD|173762 cd08222, STKc_Nek11, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11

 Score = 45.3 bits (107), Expect = 1e-05
 Identities = 36/129 (27%), Positives = 55/129 (42%), Gaps = 27/129 (20%)

Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           MH   ++H DLK +N+ L  +  +K+ D+  S           R+   S     D  +T 
Sbjct: 122 MHQRRILHRDLKAKNIFL-KNNLLKIGDFGVS-----------RLLMGSC----DLATT- 164

Query: 65  YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAM 124
                      T +Y +PE +   G+    DIWS+GCIL E+C     F+    L    +
Sbjct: 165 --------FTGTPYYMSPEALKHQGYDSKSDIWSLGCILYEMCCLAHAFEGQNFLS--VV 214

Query: 125 MERVLGPLP 133
           +  V GP P
Sbjct: 215 LRIVEGPTP 223

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M checkpoint. Nek11 may also play a role in the S-phase checkpoint as well as in DNA replication and genotoxic stress responses. Length = 260

>gnl|CDD|132984 cd06653, STKc_MEKK3_like_1, Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

 Score = 45.0 bits (106), Expect = 1e-05
 Identities = 30/104 (28%), Positives = 50/104 (48%), Gaps = 21/104 (20%)

Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           +H   ++H D+K  N+L  S+  +K+ D+ +S          KR      I+ I    T 
Sbjct: 122 LHSNMIVHRDIKGANILRDSAGNVKLGDFGAS----------KR------IQTICMSGTG 165

Query: 65  YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT 108
            +      +  T ++ +PEVI G G+    D+WSV C +VE+ T
Sbjct: 166 IKS-----VTGTPYWMSPEVISGEGYGRKADVWSVACTVVEMLT 204

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK2 and MEKK3 activate MEK5 (also called MKK5), which activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. MEKK2 and MEKK3 can also activate the MAPKs, c-Jun N-terminal kinase (JNK) and p38, through their respective MAPKKs. Length = 264

>gnl|CDD|132952 cd06621, PKc_MAPKK_Pek1_like, Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases

 Score = 45.1 bits (107), Expect = 1e-05
 Identities = 26/102 (25%), Positives = 45/102 (44%), Gaps = 26/102 (25%)

Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           +H   +IH D+KP N+LL     +K+ D+  S                   ++++  + T
Sbjct: 121 LHSRKIIHRDIKPSNILLTRKGQVKLCDFGVSG------------------ELVNSLAGT 162

Query: 65  YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVEL 106
           +          T  Y APE I G  ++   D+WS+G  L+E+
Sbjct: 163 F--------TGTSFYMAPERIQGKPYSITSDVWSLGLTLLEV 196

Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Pek1/Skh1 from Schizosaccharomyces pombe and MKK2 from Saccharomyces cerevisiae, and related proteins. Both fission yeast Pek1 and baker's yeast MKK2 are components of the cell integrity MAPK pathway. In fission yeast, Pek1 phosphorylates and activates the MAPK Pmk1/Spm1 and is regulated by the MAPKKK Mkh1. In baker's yeast, the pathway involves the MAPK Slt2, the MAPKKs MKK1 and MKK2, and the MAPKKK Bck1. The cell integrity MAPK cascade is activated by multiple stress conditions, and is essential in cell wall construction, morphogenesis, cytokinesis, and ion homeostasis. Length = 287

>gnl|CDD|132990 cd06659, STKc_PAK6, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6

 Score = 44.6 bits (105), Expect = 2e-05
 Identities = 27/109 (24%), Positives = 46/109 (42%), Gaps = 24/109 (22%)

Query: 2   FAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG 61
              +H   +IH D+K +++LL     +K+ D+       KD                   
Sbjct: 130 LCYLHSQGVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDV------------------ 171

Query: 62  STTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGE 110
                 P +  +V T ++ APEVI    +    DIWS+G +++E+  GE
Sbjct: 172 ------PKRKSLVGTPYWMAPEVISRTPYGTEVDIWSLGIMVIEMVDGE 214

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role in stress responses through its activation by the mitogen-activated protein kinase (MAPK) p38 and MAPK kinase 6 (MKK6) pathway. PAK6 is highly expressed in the brain. It is not required for viability, but together with PAK5, it is required for normal levels of locomotion and activity, and for learning and memory. Increased expression of PAK6 is found in primary and metastatic prostate cancer. PAK6 may play a role in the regulation of motility. Length = 297

>gnl|CDD|173709 cd05619, STKc_nPKC_theta, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta

 Score = 45.0 bits (106), Expect = 2e-05
 Identities = 31/116 (26%), Positives = 53/116 (45%), Gaps = 24/116 (20%)

Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           +H   +++ DLK +N+LL +  +IK+ D+               M K + +   D  + T
Sbjct: 112 LHSKGIVYRDLKLDNILLDTDGHIKIADFG--------------MCKENMLG--DAKTCT 155

Query: 65  YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLE 120
           +          T  Y APE++LG  +    D WS G +L E+  G++ F  H+  E
Sbjct: 156 F--------CGTPDYIAPEILLGQKYNTSVDWWSFGVLLYEMLIGQSPFHGHDEEE 203

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in several aspects of T-cell biology. Although T-cells also express other PKC isoforms, PKC-theta is unique in that upon antigen stimulation, it is translocated to the plasma membrane at the immunological synapse, where it mediates signals essential for T-cell activation. It is essential for TCR-induced proliferation, cytokine production, T-cell survival, and the differentiation and effector function of T-helper (Th) cells, particularly Th2 and Th17. PKC-theta is being developed as a therapeutic target for Th2-mediated allergic inflammation and Th17-mediated autoimmune diseases. Length = 316

>gnl|CDD|132979 cd06648, STKc_PAK_II, Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase

 Score = 44.7 bits (106), Expect = 2e-05
 Identities = 34/139 (24%), Positives = 61/139 (43%), Gaps = 30/139 (21%)

Query: 3   AVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG- 61
           + +H   +IH D+K +++LL S                              +K+ DFG 
Sbjct: 129 SFLHAQGVIHRDIKSDSILLTS---------------------------DGRVKLSDFGF 161

Query: 62  --STTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENL 119
               + E P +  +V T ++ APEVI  L +    DIWS+G +++E+  GE  +     L
Sbjct: 162 CAQVSKEVPRRKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMVDGEPPYFNEPPL 221

Query: 120 EHLAMMERVLGPLPQHMLK 138
           + +  +   L P  +++ K
Sbjct: 222 QAMKRIRDNLPPKLKNLHK 240

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs found in group I PAKs, such as an AID (autoinhibitory domain) and SH3 binding sites. Since group II PAKs do not contain an obvious AID, they may be regulated differently from group I PAKs. While group I PAKs interact with the SH3 containing proteins Nck, Grb2 and PIX, no such binding has been demonstrated for group II PAKs. Some known substrates of group II PAKs are also substrates of group I PAKs such as Raf, BAD, LIMK and GEFH1. Unique group II substrates include MARK/Par-1 and PDZ-RhoGEF. Group II PAKs play important roles in filopodia formation, neuron extension, cytoskeletal organization, and cell survival. Length = 285

>gnl|CDD|173711 cd05621, STKc_ROCK2, Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2

 Score = 44.6 bits (105), Expect = 2e-05
 Identities = 29/113 (25%), Positives = 52/113 (46%), Gaps = 27/113 (23%)

Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           +H + +IH D+KP+N+LL    ++K+ D+ + +          +M ++  ++        
Sbjct: 158 IHSMGLIHRDVKPDNMLLDKHGHLKLADFGTCM----------KMDETGMVRC------- 200

Query: 65  YERPDQNYIVSTRHYRAPEVILGLG----WTYPCDIWSVGCILVELCTGEALF 113
                 +  V T  Y +PEV+   G    +   CD WSVG  L E+  G+  F
Sbjct: 201 ------DTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPF 247

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found to play a role in stress fiber and focal adhesion formation. It is prominently expressed in the brain, heart, and skeletal muscles. It is implicated in vascular and neurological disorders, such as hypertension and vasospasm of the coronary and cerebral arteries. ROCK2 is also activated by caspase-2 cleavage, resulting in thrombin-induced microparticle generation in response to cell activation. Mice deficient in ROCK2 show intrauterine growth retardation and embryonic lethality because of placental dysfunction. Length = 370

>gnl|CDD|132991 cd06917, STKc_NAK1_like, Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases

 Score = 44.4 bits (105), Expect = 2e-05
 Identities = 33/122 (27%), Positives = 57/122 (46%), Gaps = 27/122 (22%)

Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           +H + +IH D+K  N+L+ ++  +K+ D+  +    ++SS  KR              +T
Sbjct: 117 IHKVGVIHRDIKAANILVTNTGNVKLCDFGVAALLNQNSS--KR--------------ST 160

Query: 65  YERPDQNYIVSTRHYRAPEVIL-GLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLA 123
           +        V T ++ APEVI  G  +    DIWS+G  + E+ TG   +   +     A
Sbjct: 161 F--------VGTPYWMAPEVITEGKYYDTKADIWSLGITIYEMATGNPPYSDVD--AFRA 210

Query: 124 MM 125
           MM
Sbjct: 211 MM 212

Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of centrin, and phosphorylates substrates in a Cdc31p-dependent manner. Length = 277

>gnl|CDD|173704 cd05613, STKc_MSK1_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1

 Score = 44.2 bits (104), Expect = 2e-05
 Identities = 37/138 (26%), Positives = 57/138 (41%), Gaps = 29/138 (21%)

Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           +H L +I+ D+K EN+LL S+ ++ + D+  S                      +F    
Sbjct: 121 LHKLGIIYRDIKLENILLDSNGHVVLTDFGLSK---------------------EFHEDE 159

Query: 65  YERPDQNYIVSTRHYRAPEVILG--LGWTYPCDIWSVGCILVELCTGEALFQTH-ENLEH 121
            ER        T  Y AP+++ G   G     D WS+G ++ EL TG + F    E    
Sbjct: 160 VERAYS--FCGTIEYMAPDIVRGGDGGHDKAVDWWSMGVLMYELLTGASPFTVDGEKNSQ 217

Query: 122 LAMMERVLG---PLPQHM 136
             +  R+L    P PQ M
Sbjct: 218 AEISRRILKSEPPYPQEM 235

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydrophobic motif (HM) of NTD, which facilitates the phosphorylation of the A-loop and activates the NTD, which in turn phosphorylates downstream targets. MSK1 plays a role in the regulation of translational control and transcriptional activation. It phosphorylates the transcription factors, CREB and NFkappaB. It also phosphorylates the nucleosomal proteins H3 and HMG-14. Increased phosphorylation of MEK1 is associated with the development of cerebral ischemic/hypoxic preconditioning. Length = 290

>gnl|CDD|173675 cd05584, STKc_p70S6K, Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase

 Score = 44.0 bits (104), Expect = 3e-05
 Identities = 33/117 (28%), Positives = 53/117 (45%), Gaps = 31/117 (26%)

Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDY---KSSLHTPKDSSYFKRMPKSSAIKVIDFG 61
           +H   +I+ DLKPEN+LL +  ++K+ D+   K S+H                      G
Sbjct: 116 LHQQGIIYRDLKPENILLDAQGHVKLTDFGLCKESIHE---------------------G 154

Query: 62  STTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHEN 118
           + T+          T  Y APE+++  G     D WS+G ++ ++ TG   F T EN
Sbjct: 155 TVTHT------FCGTIEYMAPEILMRSGHGKAVDWWSLGALMYDMLTGAPPF-TAEN 204

Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the insulin receptor substrate IRS-1, among others. Mammals contain two isoforms of p70S6K, named S6K1 and S6K2 (or S6K-beta). Length = 323

>gnl|CDD|173710 cd05620, STKc_nPKC_delta, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta

 Score = 44.2 bits (104), Expect = 3e-05
 Identities = 31/110 (28%), Positives = 51/110 (46%), Gaps = 24/110 (21%)

Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           +H   +I+ DLK +NV+L    +IK+ D+               M K +     D  ++T
Sbjct: 112 LHSKGIIYRDLKLDNVMLDRDGHIKIADFG--------------MCKENVFG--DNRAST 155

Query: 65  YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQ 114
           +          T  Y APE++ GL +T+  D WS G +L E+  G++ F 
Sbjct: 156 F--------CGTPDYIAPEILQGLKYTFSVDWWSFGVLLYEMLIGQSPFH 197

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. It slows down cell proliferation, inducing cell cycle arrest and enhancing cell differentiation. PKC-delta is also involved in the regulation of transcription as well as immune and inflammatory responses. It plays a central role in the genotoxic stress response that leads to DNA damaged-induced apoptosis. Length = 316

>gnl|CDD|173735 cd07831, STKc_MOK, Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase

 Score = 43.4 bits (103), Expect = 4e-05
 Identities = 16/25 (64%), Positives = 22/25 (88%)

Query: 221 LLQGLLRYDPTDRLTAREALRHPFF 245
           LL+ LL YDP +R+TA++ALRHP+F
Sbjct: 258 LLKKLLAYDPDERITAKQALRHPYF 282

Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation. Length = 282

>gnl|CDD|173697 cd05606, STKc_beta_ARK, Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase

 Score = 43.4 bits (102), Expect = 4e-05
 Identities = 30/114 (26%), Positives = 53/114 (46%), Gaps = 27/114 (23%)

Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           MH+  +++ DLKP N+LL    ++++ D   +        + K+ P +S           
Sbjct: 113 MHNRFVVYRDLKPANILLDEHGHVRISDLGLA------CDFSKKKPHAS----------- 155

Query: 65  YERPDQNYIVSTRHYRAPEVIL-GLGWTYPCDIWSVGCILVELCTGEALFQTHE 117
                    V T  Y APEV+  G+ +    D +S+GC+L +L  G + F+ H+
Sbjct: 156 ---------VGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHK 200

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is composed of GRK2, GRK3, and similar proteins. GRK2 and GRK3 are both widely expressed in many tissues, although GRK2 is present at higher levels. They contain an N-terminal RGS homology (RH) domain, a central catalytic domain, and C-terminal pleckstrin homology (PH) domain that mediates PIP2 and G protein betagamma-subunit translocation to the membrane. GRK2 (also called beta-ARK or beta-ARK1) is important in regulating several cardiac receptor responses. It plays a role in cardiac development and in hypertension. Deletion of GRK2 in mice results in embryonic lethality, caused by hypoplasia of the ventricular myocardium. GRK2 also plays important roles in the liver (as a regulator of portal blood pressure), in immune cells, and in the nervous system. Altered GRK2 expression has been reported in several disorders including major depression, schizophrenia, bipolar disorder, and Parkinsonism. Length = 278

>gnl|CDD|132973 cd06642, STKc_STK25-YSK1, Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1

 Score = 43.5 bits (102), Expect = 4e-05
 Identities = 30/106 (28%), Positives = 43/106 (40%), Gaps = 24/106 (22%)

Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           +H    IH D+K  NVLL     +K+ D+  +                        G  T
Sbjct: 117 LHSERKIHRDIKAANVLLSEQGDVKLADFGVA------------------------GQLT 152

Query: 65  YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGE 110
             +  +N  V T  + APEVI    + +  DIWS+G   +EL  GE
Sbjct: 153 DTQIKRNTFVGTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKGE 198

Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25 is a candidate gene responsible for pseudopseudohypoparathyroidism (PPHP), a disease that shares features with the Albright hereditary osteodystrophy (AHO) phenotype. Length = 277

>gnl|CDD|132987 cd06656, STKc_PAK3, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3

 Score = 43.6 bits (102), Expect = 4e-05
 Identities = 30/124 (24%), Positives = 53/124 (42%), Gaps = 30/124 (24%)

Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG--- 61
           +H   +IH D+K +N+LL                               ++K+ DFG   
Sbjct: 131 LHSNQVIHRDIKSDNILL---------------------------GMDGSVKLTDFGFCA 163

Query: 62  STTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEH 121
             T E+  ++ +V T ++ APEV+    +    DIWS+G + +E+  GE  +     L  
Sbjct: 164 QITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRA 223

Query: 122 LAMM 125
           L ++
Sbjct: 224 LYLI 227

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK3 is highly expressed in the brain. It is implicated in neuronal plasticity, synapse formation, dendritic spine morphogenesis, cell cycle progression, neuronal migration, and apoptosis. Inactivating mutations in the PAK3 gene cause X-linked non-syndromic mental retardation, the severity of which depends on the site of the mutation. Length = 297

>gnl|CDD|88519 cd05618, STKc_aPKC_iota, Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota

 Score = 43.5 bits (102), Expect = 4e-05
 Identities = 32/112 (28%), Positives = 50/112 (44%), Gaps = 30/112 (26%)

Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDY---KSSLHTPKDSSYFKRMPKSSAIKVIDFG 61
           +H+  +I+ DLK +NVLL S  +IK+ DY   K  L     +S F   P           
Sbjct: 112 LHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSTFCGTP----------- 160

Query: 62  STTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALF 113
                    NYI       APE++ G  + +  D W++G ++ E+  G + F
Sbjct: 161 ---------NYI-------APEILRGEDYGFSVDWWALGVLMFEMMAGRSPF 196

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target of tumor-specific gene amplification in many human cancers, and has been identified as a human oncogene. In addition to its role in transformed growth, PKC-iota also promotes invasion, chemoresistance, and tumor cell survival. Expression profiling of PKC-iota is a prognostic marker of poor clinical outcome in several human cancers. PKC-iota also plays a role in establishing cell polarity, and has critical embryonic functions. Length = 329

>gnl|CDD|132985 cd06654, STKc_PAK1, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1

 Score = 43.6 bits (102), Expect = 5e-05
 Identities = 30/124 (24%), Positives = 53/124 (42%), Gaps = 30/124 (24%)

Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG--- 61
           +H   +IH D+K +N+LL                               ++K+ DFG   
Sbjct: 132 LHSNQVIHRDIKSDNILL---------------------------GMDGSVKLTDFGFCA 164

Query: 62  STTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEH 121
             T E+  ++ +V T ++ APEV+    +    DIWS+G + +E+  GE  +     L  
Sbjct: 165 QITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRA 224

Query: 122 LAMM 125
           L ++
Sbjct: 225 LYLI 228

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK1 is important in the regulation of many cellular processes including cytoskeletal dynamics, cell motility, growth, and proliferation. Although PAK1 has been regarded mainly as a cytosolic protein, recent reports indicate that PAK1 also exists in significant amounts in the nucleus, where it is involved in transcription modulation and in cell cycle regulatory events. PAK1 is also involved in transformation and tumorigenesis. Its overexpression, hyperactivation and increased nuclear accumulation is correlated to breast cancer invasiveness and progression. Nuclear accumulation is also linked to tamoxifen resistance in breast cancer cells. Length = 296

>gnl|CDD|132980 cd06649, PKc_MEK2, Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2

 Score = 43.5 bits (102), Expect = 5e-05
 Identities = 30/100 (30%), Positives = 47/100 (47%), Gaps = 26/100 (26%)

Query: 10  MIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD 69
           ++H D+KP N+L+ S   IK+ D+  S                   ++ID  + ++    
Sbjct: 125 IMHRDVKPSNILVNSRGEIKLCDFGVSG------------------QLIDSMANSF---- 162

Query: 70  QNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG 109
               V TR Y +PE + G  ++   DIWS+G  LVEL  G
Sbjct: 163 ----VGTRSYMSPERLQGTHYSVQSDIWSMGLSLVELAIG 198

Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downstream targets, extracellular signal-regulated kinase (ERK) 1 and ERK2, on specific threonine and tyrosine residues. The ERK cascade starts with extracellular signals including growth factors, hormones, and neurotransmitters, which act through receptors and ion channels to initiate intracellular signaling that leads to the activation at the MAPKKK (Raf-1 or MOS) level, which leads to the transmission of signals to MEK2, and finally to ERK1/2. The ERK cascade plays an important role in cell proliferation, differentiation, oncogenic transformation, and cell cycle control, as well as in apoptosis and cell survival under certain conditions. Gain-of-function mutations in genes encoding ERK cascade proteins, including MEK2, cause cardiofaciocutaneous (CFC) syndrome, a condition leading to multiple congenital anomalies and mental retardation in patients. Length = 331

>gnl|CDD|132986 cd06655, STKc_PAK2, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2

 Score = 43.6 bits (102), Expect = 5e-05
 Identities = 31/124 (25%), Positives = 53/124 (42%), Gaps = 30/124 (24%)

Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG--- 61
           +H   +IH D+K +NVLL                               ++K+ DFG   
Sbjct: 131 LHANQVIHRDIKSDNVLL---------------------------GMDGSVKLTDFGFCA 163

Query: 62  STTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEH 121
             T E+  ++ +V T ++ APEV+    +    DIWS+G + +E+  GE  +     L  
Sbjct: 164 QITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRA 223

Query: 122 LAMM 125
           L ++
Sbjct: 224 LYLI 227

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK2 plays a role in pro-apoptotic signaling. It is cleaved and activated by caspases leading to morphological changes during apoptosis. PAK2 is also activated in response to a variety of stresses including DNA damage, hyperosmolarity, serum starvation, and contact inhibition, and may play a role in coordinating the stress response. PAK2 also contributes to cancer cell invasion through a mechanism distinct from that of PAK1. Length = 296

>gnl|CDD|173768 cd08228, STKc_Nek6, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6

 Score = 43.1 bits (101), Expect = 5e-05
 Identities = 30/109 (27%), Positives = 49/109 (44%), Gaps = 24/109 (22%)

Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           MH   ++H D+KP NV + ++  +K+ D               R           F S T
Sbjct: 122 MHSRRVMHRDIKPANVFITATGVVKLGDLG-----------LGRF----------FSSKT 160

Query: 65  YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALF 113
                 + +V T +Y +PE I   G+ +  DIWS+GC+L E+   ++ F
Sbjct: 161 TA---AHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPF 206

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase and anaphase, and to the midbody during cytokinesis. Length = 267

>gnl|CDD|173741 cd07843, STKc_CDC2L1, Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1

 Score = 43.0 bits (102), Expect = 6e-05
 Identities = 14/25 (56%), Positives = 19/25 (76%)

Query: 221 LLQGLLRYDPTDRLTAREALRHPFF 245
           LL  LL YDP  R++A +AL+HP+F
Sbjct: 269 LLNRLLTYDPAKRISAEDALKHPYF 293

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the major isoform, associates with cyclin L and is expressed throughout the cell cycle. It is involved in RNA processing and the regulation of transcription. CDK11(p58) associates with cyclin D3 and is expressed during the G2/M phase of the cell cycle. It plays roles in spindle morphogenesis, centrosome maturation, sister chromatid cohesion, and the completion of mitosis. CDK11(p46) is formed from the larger isoforms by caspases during TNFalpha- and Fas-induced apoptosis. It functions as a downstream effector kinase in apoptotic signaling pathways and interacts with eukaryotic initiation factor 3f (eIF3f), p21-activated kinase (PAK1), and Ran-binding protein (RanBPM). Length = 293

>gnl|CDD|132960 cd06629, STKc_MAPKKK_Bck1_like, Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases

 Score = 42.9 bits (101), Expect = 6e-05
 Identities = 33/154 (21%), Positives = 63/154 (40%), Gaps = 32/154 (20%)

Query: 3   AVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGS 62
           A +H   ++H DLK +N+L+ +    K+ D+  S  +                       
Sbjct: 122 AYLHSKGILHRDLKADNLLVDADGICKISDFGISKKS----------------------D 159

Query: 63  TTYERPDQNYIVSTRHYRAPEVI--LGLGWTYPCDIWSVGCILVELCTGEALFQTHENLE 120
             Y+      +  +  + APEVI     G++   DIWS+GC+++E+  G    +   + E
Sbjct: 160 DIYDNDQNMSMQGSVFWMAPEVIHSYSQGYSAKVDIWSLGCVVLEMFAGR---RPWSDEE 216

Query: 121 HLAMM-----ERVLGPLPQHMLKRVDRHAEKYVR 149
            +A M     +R   P+P  +   +   A  ++ 
Sbjct: 217 AIAAMFKLGNKRSAPPIPPDVSMNLSPVALDFLN 250

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell integrity MAPK pathway, which is activated by stresses and aggressions to the cell wall. The MAPKKK Bck1, MAPKKs Mkk1 and Mkk2, and the MAPK Slt2 make up the cascade that is important in the maintenance of cell wall homeostasis. Fission yeast Mkh1 is involved in MAPK cascades regulating cell morphology, cell wall integrity, salt resistance, and filamentous growth in response to stress. Length = 272

>gnl|CDD|173727 cd06613, STKc_MAP4K3_like, Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases

 Score = 42.7 bits (101), Expect = 6e-05
 Identities = 28/116 (24%), Positives = 46/116 (39%), Gaps = 28/116 (24%)

Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           +H+   IH D+K  N+LL     +K+ D+  S      ++  KR                
Sbjct: 117 LHETGKIHRDIKGANILLTEDGDVKLADFGVS--AQLTATIAKR---------------- 158

Query: 65  YERPDQNYIVSTRHYRAPEVI---LGLGWTYPCDIWSVGCILVELCTGE-ALFQTH 116
                    + T ++ APEV       G+   CDIW++G   +EL   +  +F  H
Sbjct: 159 ------KSFIGTPYWMAPEVAAVERKGGYDGKCDIWALGITAIELAELQPPMFDLH 208

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K1, also called haematopoietic progenitor kinase 1 (HPK1), is a hematopoietic-specific STK involved in many cellular signaling cascades including MAPK, antigen receptor, apoptosis, growth factor, and cytokine signaling. It participates in the regulation of T cell receptor signaling and T cell-mediated immune responses. MAP4K2 was referred to as germinal center (GC) kinase because of its preferred location in GC B cells. MAP4K3 plays a role in the nutrient-responsive pathway of mTOR (mammalian target of rapamycin) signaling. It is required in the activation of S6 kinase by amino acids and for the phosphorylation of the mTOR-regulated inhibitor of eukaryotic initiation factor 4E. MAP4K5, also called germinal center kinase-related enzyme (GCKR), has been shown to activate the MAPK c-Jun N-terminal kinase (JNK). Length = 262

>gnl|CDD|173688 cd05597, STKc_DMPK_like, Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases

 Score = 42.8 bits (101), Expect = 7e-05
 Identities = 33/114 (28%), Positives = 49/114 (42%), Gaps = 28/114 (24%)

Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           +H L  +H D+KP+NVLL  + +I++ D+ S L    D +                    
Sbjct: 118 VHQLGYVHRDIKPDNVLLDKNGHIRLADFGSCLRLLADGTV------------------- 158

Query: 65  YERPDQNYIVSTRHYRAPEVIL----GLGWTYP-CDIWSVGCILVELCTGEALF 113
                 N  V T  Y +PE++     G G   P CD WS+G  + E+  GE  F
Sbjct: 159 ----QSNVAVGTPDYISPEILQAMEDGKGRYGPECDWWSLGVCMYEMLYGETPF 208

Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy, and cardiac conduction defects. The genetic basis for DM1 is the mutational expansion of a CTG repeat in the 3'-UTR of DMPK. DMPK is expressed in skeletal and cardiac muscles, and in central nervous tissues. The functional role of DMPK is not fully understood. It may play a role in the signal transduction and homeostasis of calcium. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKgamma is expressed in heart and skeletal muscles, unlike MRCKalpha and MRCKbeta, which are expressed ubiquitously. Length = 331

>gnl|CDD|173769 cd08229, STKc_Nek7, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7

 Score = 42.7 bits (100), Expect = 7e-05
 Identities = 29/109 (26%), Positives = 51/109 (46%), Gaps = 24/109 (22%)

Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           MH   ++H D+KP NV + ++  +K+ D            +F    K++A          
Sbjct: 122 MHSRRVMHRDIKPANVFITATGVVKLGDLGLG-------RFFSS--KTTA---------- 162

Query: 65  YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALF 113
                 + +V T +Y +PE I   G+ +  DIWS+GC+L E+   ++ F
Sbjct: 163 -----AHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPF 206

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase. Length = 267

>gnl|CDD|132966 cd06635, STKc_TAO1, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1

 Score = 42.8 bits (100), Expect = 7e-05
 Identities = 31/108 (28%), Positives = 45/108 (41%), Gaps = 31/108 (28%)

Query: 2   FAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG 61
            A +H   MIH D+K  N+LL                            +   +K+ DFG
Sbjct: 138 LAYLHSHNMIHRDIKAGNILLT---------------------------EPGQVKLADFG 170

Query: 62  STTYERPDQNYIVSTRHYRAPEVILGLG---WTYPCDIWSVGCILVEL 106
           S +   P  N  V T ++ APEVIL +    +    D+WS+G   +EL
Sbjct: 171 SASIASP-ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIEL 217

Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuronal apoptosis. TAO1 interacts with the checkpoint proteins BubR1 and Mad2, and plays an important role in regulating mitotic progression, which is required for both chromosome congression and checkpoint-induced anaphase delay. TAO1 may play a role in protecting genomic stability. Length = 317

>gnl|CDD|132981 cd06650, PKc_MEK1, Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1

 Score = 42.7 bits (100), Expect = 8e-05
 Identities = 29/100 (29%), Positives = 47/100 (47%), Gaps = 26/100 (26%)

Query: 10  MIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD 69
           ++H D+KP N+L+ S   IK+ D+  S                   ++ID  + ++    
Sbjct: 125 IMHRDVKPSNILVNSRGEIKLCDFGVSG------------------QLIDSMANSF---- 162

Query: 70  QNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG 109
               V TR Y +PE + G  ++   DIWS+G  LVE+  G
Sbjct: 163 ----VGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAIG 198

Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downstream targets, extracellular signal-regulated kinase (ERK) 1 and ERK2, on specific threonine and tyrosine residues. The ERK cascade starts with extracellular signals including growth factors, hormones, and neurotransmitters, which act through receptors and ion channels to initiate intracellular signaling that leads to the activation at the MAPKKK (Raf-1 or MOS) level, which leads to the transmission of signals to MEK1, and finally to ERK1/2. The ERK cascade plays an important role in cell proliferation, differentiation, oncogenic transformation, and cell cycle control, as well as in apoptosis and cell survival under certain conditions. Gain-of-function mutations in genes encoding ERK cascade proteins, including MEK1, cause cardiofaciocutaneous (CFC) syndrome, a condition leading to multiple congenital anomalies and mental retardation in patients. MEK1 also plays a role in cell cycle control. Length = 333

>gnl|CDD|140293 PTZ00267, PTZ00267, NIMA-related protein kinase; Provisional

 Score = 43.1 bits (101), Expect = 8e-05
 Identities = 34/125 (27%), Positives = 53/125 (42%), Gaps = 25/125 (20%)

Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           +H   M+H DLK  N+ L+ +  IK+ D+  S       S             +D  S+ 
Sbjct: 185 VHSRKMMHRDLKSANIFLMPTGIIKLGDFGFSKQYSDSVS-------------LDVASS- 230

Query: 65  YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAM 124
                      T +Y APE+     ++   D+WS+G IL EL T    F+     E   +
Sbjct: 231 --------FCGTPYYLAPELWERKRYSKKADMWSLGVILYELLTLHRPFKGPSQRE---I 279

Query: 125 MERVL 129
           M++VL
Sbjct: 280 MQQVL 284

Length = 478

>gnl|CDD|173661 cd05570, STKc_PKC, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C

 Score = 42.7 bits (101), Expect = 8e-05
 Identities = 34/129 (26%), Positives = 55/129 (42%), Gaps = 26/129 (20%)

Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           +H+  +I+ DLK +NVLL S  +IK+ D+               M K      I  G TT
Sbjct: 112 LHERGIIYRDLKLDNVLLDSEGHIKIADFG--------------MCKEG----ILGGVTT 153

Query: 65  YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALF--QTHENLEHL 122
                 +    T  Y APE++    +    D W++G +L E+  G++ F     + L   
Sbjct: 154 ------STFCGTPDYIAPEILSYQPYGPAVDWWALGVLLYEMLAGQSPFEGDDEDELFQS 207

Query: 123 AMMERVLGP 131
            + + V  P
Sbjct: 208 ILEDEVRYP 216

Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only require PS. PKCs phosphorylate and modify the activities of a wide variety of cellular proteins including receptors, enzymes, cytoskeletal proteins, transcription factors, and other kinases. They play a central role in signal transduction pathways that regulate cell migration and polarity, proliferation, differentiation, and apoptosis. Also included in this subfamily are the PKC-like proteins, called PKNs. Length = 318

>gnl|CDD|143359 cd07854, STKc_MAPK4_6, Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6

 Score = 42.5 bits (100), Expect = 1e-04
 Identities = 16/41 (39%), Positives = 25/41 (60%), Gaps = 3/41 (7%)

Query: 207 IMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTR 247
           ++  V+  A D    L+ +L ++P DRLTA EAL HP+ + 
Sbjct: 268 LLPGVNPEALDF---LEQILTFNPMDRLTAEEALMHPYMSC 305

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progression in certain conditions. It may also play a role in glucose-induced insulin secretion. MAPK6 and MAPK4 cooperate to regulate the activity of MAPK-activated protein kinase 5 (MK5), leading to its relocation to the cytoplasm and exclusion from the nucleus. The MAPK6/MK5 and MAPK4/MK5 pathways may play critical roles in embryonic and post-natal development. Length = 342

>gnl|CDD|173758 cd08218, STKc_Nek1, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1

 Score = 42.1 bits (99), Expect = 1e-04
 Identities = 29/115 (25%), Positives = 49/115 (42%), Gaps = 34/115 (29%)

Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG--- 61
           +HD  ++H D+K +N+ L                            K   IK+ DFG   
Sbjct: 117 VHDRKILHRDIKSQNIFLT---------------------------KDGTIKLGDFGIAR 149

Query: 62  --STTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQ 114
             ++T E       + T +Y +PE+     +    DIW++GC+L E+CT +  F+
Sbjct: 150 VLNSTVEL--ARTCIGTPYYLSPEICENRPYNNKSDIWALGCVLYEMCTLKHAFE 202

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycystic kidney disease, which is characterized by benign polycystic tumors formed by abnormal overgrowth of renal epithelial cells. It appears also to be involved in DNA damage response, and may be important for both correct DNA damage checkpoint activation and DNA repair. Length = 256

>gnl|CDD|132972 cd06641, STKc_MST3, Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3

 Score = 42.0 bits (98), Expect = 1e-04
 Identities = 30/106 (28%), Positives = 42/106 (39%), Gaps = 24/106 (22%)

Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           +H    IH D+K  NVLL     +K+ D+  +                        G  T
Sbjct: 117 LHSEKKIHRDIKAANVLLSEHGEVKLADFGVA------------------------GQLT 152

Query: 65  YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGE 110
             +  +N  V T  + APEVI    +    DIWS+G   +EL  GE
Sbjct: 153 DTQIKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELAKGE 198

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and intrauterine growth retardation. Length = 277

>gnl|CDD|173685 cd05594, STKc_PKB_alpha, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha

 Score = 42.3 bits (99), Expect = 1e-04
 Identities = 35/135 (25%), Positives = 53/135 (39%), Gaps = 31/135 (22%)

Query: 10  MIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD 69
           +++ DLK EN++L    +IK+ D+       KD +  K                      
Sbjct: 117 VVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKTF-------------------- 156

Query: 70  QNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALF--QTHENLEHLAMME- 126
                 T  Y APEV+    +    D W +G ++ E+  G   F  Q HE L  L +ME 
Sbjct: 157 ----CGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEE 212

Query: 127 ----RVLGPLPQHML 137
               R L P  + +L
Sbjct: 213 IRFPRTLSPEAKSLL 227

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficient in PKB-alpha exhibit perinatal morbidity, growth retardation, reduction in body weight accompanied by reduced sizes of multiple organs, and enhanced apoptosis in some cell types. PKB-alpha activity has been reported to be frequently elevated in breast and prostate cancers. In some cancer cells, PKB-alpha may act as a suppressor of metastasis. Length = 325

>gnl|CDD|132971 cd06640, STKc_MST4, Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4

 Score = 42.0 bits (98), Expect = 1e-04
 Identities = 30/106 (28%), Positives = 42/106 (39%), Gaps = 24/106 (22%)

Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           +H    IH D+K  NVLL     +K+ D+  +                        G  T
Sbjct: 117 LHSEKKIHRDIKAANVLLSEQGDVKLADFGVA------------------------GQLT 152

Query: 65  YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGE 110
             +  +N  V T  + APEVI    +    DIWS+G   +EL  GE
Sbjct: 153 DTQIKRNTFVGTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGE 198

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by interacting with the Golgi matrix protein GM130 and may play a role in cell migration. Length = 277

>gnl|CDD|132978 cd06647, STKc_PAK_I, Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase

 Score = 41.8 bits (98), Expect = 1e-04
 Identities = 28/109 (25%), Positives = 47/109 (43%), Gaps = 30/109 (27%)

Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           +H   +IH D+K +N+LL                               ++K+ DFG   
Sbjct: 131 LHSNQVIHRDIKSDNILL---------------------------GMDGSVKLTDFGFCA 163

Query: 65  YERPDQN---YIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGE 110
              P+Q+    +V T ++ APEV+    +    DIWS+G + +E+  GE
Sbjct: 164 QITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGE 212

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group I PAKs, also called conventional PAKs, include PAK1, PAK2, and PAK3. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). They interact with the SH3 domain containing proteins Nck, Grb2 and PIX. Binding of group I PAKs to activated GTPases leads to conformational changes that destabilize the AID, allowing autophosphorylation and full activation of the kinase domain. Known group I PAK substrates include MLCK, Bad, Raf, MEK1, LIMK, Merlin, Vimentin, Myc, Stat5a, and Aurora A, among others. Length = 293

>gnl|CDD|88524 cd05623, STKc_MRCK_alpha, Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha

 Score = 42.0 bits (98), Expect = 1e-04
 Identities = 31/121 (25%), Positives = 52/121 (42%), Gaps = 28/121 (23%)

Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           +H L  +H D+KP+N+L+  + +I++ D+ S L   +D +                    
Sbjct: 118 VHQLHYVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGTV------------------- 158

Query: 65  YERPDQNYIVSTRHYRAPEVIL----GLGWTYP-CDIWSVGCILVELCTGEALFQTHENL 119
                 +  V T  Y +PE++     G G   P CD WS+G  + E+  GE  F     +
Sbjct: 159 ----QSSVAVGTPDYISPEILQAMEDGKGKYGPECDWWSLGVCMYEMLYGETPFYAESLV 214

Query: 120 E 120
           E
Sbjct: 215 E 215

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathway. Length = 332

>gnl|CDD|143338 cd07833, STKc_CDKL, Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases

 Score = 41.1 bits (97), Expect = 2e-04
 Identities = 13/25 (52%), Positives = 17/25 (68%)

Query: 221 LLQGLLRYDPTDRLTAREALRHPFF 245
            L+  LR DP +RLT  E L+HP+F
Sbjct: 264 FLKACLRMDPKERLTCDELLQHPYF 288

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning and memory. Length = 288

>gnl|CDD|173742 cd07845, STKc_CDK10, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10

 Score = 41.6 bits (98), Expect = 2e-04
 Identities = 14/25 (56%), Positives = 15/25 (60%)

Query: 221 LLQGLLRYDPTDRLTAREALRHPFF 245
           LL  LL YDP  R TA EAL   +F
Sbjct: 269 LLNFLLMYDPKKRATAEEALESSYF 293

Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing increases the transcription of c-RAF and the activation of the p42/p44 MAPK pathway, which leads to antiestrogen resistance. Patients who express low levels of CDK10 relapse early on tamoxifen. Length = 309

>gnl|CDD|173667 cd05576, STKc_RPK118_like, Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins

 Score = 41.4 bits (97), Expect = 2e-04
 Identities = 19/40 (47%), Positives = 22/40 (55%)

Query: 77  RHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTH 116
             Y APEV      T  CD WS+G IL EL TG+ L + H
Sbjct: 146 NMYCAPEVGGISEETEACDWWSLGAILFELLTGKTLVECH 185

Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phosphate (SPP), a lipid messenger involved in many cellular events. RPK118 may be involved in transmitting SPP-mediated signaling. RPK118 also binds the antioxidant peroxiredoxin-3 (PRDX3). RPK118 may be involved in the transport of PRDX3 from the cytoplasm to its site of function in the mitochondria. Length = 237

>gnl|CDD|173722 cd05633, STKc_GRK3, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3

 Score = 41.9 bits (98), Expect = 2e-04
 Identities = 30/114 (26%), Positives = 52/114 (45%), Gaps = 27/114 (23%)

Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           MH+  +++ DLKP N+LL    ++++ D   +        + K+ P +S           
Sbjct: 113 MHNRFVVYRDLKPANILLDEHGHVRISDLGLA------CDFSKKKPHAS----------- 155

Query: 65  YERPDQNYIVSTRHYRAPEVIL-GLGWTYPCDIWSVGCILVELCTGEALFQTHE 117
                    V T  Y APEV+  G  +    D +S+GC+L +L  G + F+ H+
Sbjct: 156 ---------VGTHGYMAPEVLQKGTAYDSSADWFSLGCMLFKLLRGHSPFRQHK 200

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is widely expressed in many tissues. GRK3-deficient mice show a lack of olfactory receptor desensitization and altered regulation of the M2 muscarinic airway. GRK3 is involved in modulating the cholinergic response of airway smooth muscles. It also plays a role in dopamine receptor regulation. GRK3 promoter polymorphisms may be associated with bipolar disorder. Length = 279

>gnl|CDD|173674 cd05583, STKc_MSK_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase

 Score = 41.7 bits (98), Expect = 2e-04
 Identities = 33/113 (29%), Positives = 47/113 (41%), Gaps = 25/113 (22%)

Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           +H L +I+ D+K EN+LL S  ++ + D+  S                      +F +  
Sbjct: 121 LHQLGIIYRDIKLENILLDSEGHVVLTDFGLSK---------------------EFLAEE 159

Query: 65  YERPDQNYIVSTRHYRAPEVILG--LGWTYPCDIWSVGCILVELCTGEALFQT 115
            ER        T  Y APEVI G   G     D WS+G +  EL TG + F  
Sbjct: 160 EER--AYSFCGTIEYMAPEVIRGGSGGHDKAVDWWSLGVLTFELLTGASPFTV 210

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines. This triggers phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydrophobic motif (HM) in the C-terminal extension of NTD, which facilitates the phosphorylation of the A-loop and activates the NTD, which in turn phosphorylates downstream targets. MSKs are predominantly nuclear proteins. They are widely expressed in many tissues including heart, brain, lung, liver, kidney, and pancreas. There are two isoforms of MSK, called MSK1 and MSK2. Length = 288

>gnl|CDD|132975 cd06644, STKc_STK10_LOK, Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase

 Score = 41.6 bits (97), Expect = 2e-04
 Identities = 31/110 (28%), Positives = 46/110 (41%), Gaps = 29/110 (26%)

Query: 2   FAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG 61
              +H + +IH DLK  NVLL     IK+ D+  S    K                    
Sbjct: 123 LQYLHSMKIIHRDLKAGNVLLTLDGDIKLADFGVSAKNVK-------------------- 162

Query: 62  STTYERPDQNYIVSTRHYRAPEVIL-----GLGWTYPCDIWSVGCILVEL 106
             T +R D    + T ++ APEV++        + Y  DIWS+G  L+E+
Sbjct: 163 --TLQRRDS--FIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEM 208

Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types. Length = 292

>gnl|CDD|132970 cd06639, STKc_myosinIIIB, Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin

 Score = 41.5 bits (97), Expect = 2e-04
 Identities = 33/121 (27%), Positives = 50/121 (41%), Gaps = 36/121 (29%)

Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGST- 63
           +H+  +IH D+K  N+LL +                              +K++DFG + 
Sbjct: 144 LHNNRIIHRDVKGNNILLTT---------------------------EGGVKLVDFGVSA 176

Query: 64  --TYERPDQNYIVSTRHYRAPEVI-----LGLGWTYPCDIWSVGCILVELCTGE-ALFQT 115
             T  R  +N  V T  + APEVI         +   CD+WS+G   +EL  G+  LF  
Sbjct: 177 QLTSTRLRRNTSVGTPFWMAPEVIACEQQYDYSYDARCDVWSLGITAIELGDGDPPLFDM 236

Query: 116 H 116
           H
Sbjct: 237 H 237

Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also present in the brain and testis. The human class IIIB myosin gene maps to a region that overlaps the locus for Bardet-Biedl syndrome, which is characterized by dysmorphic extremities, retinal dystrophy, obesity, male hypogenitalism, and renal abnormalities. Length = 291

>gnl|CDD|132947 cd06616, PKc_MKK4, Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4

 Score = 41.2 bits (97), Expect = 2e-04
 Identities = 35/137 (25%), Positives = 54/137 (39%), Gaps = 41/137 (29%)

Query: 7   DLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYE 66
           +L +IH D+KP N+LL                            ++  IK+ DFG +   
Sbjct: 126 ELKIIHRDVKPSNILL---------------------------DRNGNIKLCDFGISGQL 158

Query: 67  RPDQNYIVSTRH-----YRAPEVIL---GLGWTYPCDIWSVGCILVELCTGEALFQTHEN 118
               + I  TR      Y APE I      G+    D+WS+G  L E+ TG+  +    +
Sbjct: 159 ---VDSIAKTRDAGCRPYMAPERIDPSARDGYDVRSDVWSLGITLYEVATGKFPYPKWNS 215

Query: 119 L-EHLAMMERVLGPLPQ 134
           + + L  +  V G  P 
Sbjct: 216 VFDQLTQV--VKGDPPI 230

Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates the downstream targets, c-Jun N-terminal kinase (JNK) and p38 MAPK, on specific threonine and tyrosine residues. JNK and p38 are collectively known as stress-activated MAPKs, as they are activated in response to a variety of environmental stresses and pro-inflammatory cytokines. Their activation is associated with the induction of cell death. Mice deficient in MKK4 die during embryogenesis and display anemia, severe liver hemorrhage, and abnormal hepatogenesis. MKK4 may also play roles in the immune system and in cardiac hypertrophy. It plays a major role in cancer as a tumor and metastasis suppressor. Under certain conditions, MKK4 is pro-oncogenic. Length = 288

>gnl|CDD|173679 cd05588, STKc_aPKC, Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C

 Score = 41.3 bits (97), Expect = 2e-04
 Identities = 33/109 (30%), Positives = 52/109 (47%), Gaps = 24/109 (22%)

Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           +H+  +I+ DLK +NVLL +  +IK+ DY               M K   I+  D  ST 
Sbjct: 112 LHERGIIYRDLKLDNVLLDAEGHIKLTDYG--------------MCK-EGIRPGDTTSTF 156

Query: 65  YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALF 113
              P  NYI       APE++ G  + +  D W++G ++ E+  G + F
Sbjct: 157 CGTP--NYI-------APEILRGEDYGFSVDWWALGVLMFEMMAGRSPF 196

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions including proliferation, migration, apoptosis, polarity maintenance and cytoskeletal regulation. They also play a critical role in the regulation of glucose metabolism and in the pathogenesis of type 2 diabetes. Length = 329

>gnl|CDD|132965 cd06634, STKc_TAO2, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2

 Score = 41.2 bits (96), Expect = 2e-04
 Identities = 31/108 (28%), Positives = 45/108 (41%), Gaps = 31/108 (28%)

Query: 2   FAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG 61
            A +H   MIH D+K  N+LL                            +   +K+ DFG
Sbjct: 128 LAYLHSHNMIHRDVKAGNILLS---------------------------EPGLVKLGDFG 160

Query: 62  STTYERPDQNYIVSTRHYRAPEVILGLG---WTYPCDIWSVGCILVEL 106
           S +   P  N  V T ++ APEVIL +    +    D+WS+G   +EL
Sbjct: 161 SASIMAP-ANXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIEL 207

Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. TAO2 contains a long C-terminal extension with autoinhibitory segments. It is activated by the release of this inhibition and the phosphorylation of its activation loop serine. TAO2 functions as a regulator of actin cytoskeletal and microtubule organization. In addition, it regulates the transforming growth factor-activated kinase 1 (TAK1), which is a MAPKKK that plays an essential role in the signaling pathways of tumor necrosis factor (TNF), interleukin 1 (IL-1), and Toll-like receptor (TLR). Length = 308

>gnl|CDD|173725 cd06608, STKc_myosinIII_like, Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases

 Score = 40.7 bits (96), Expect = 3e-04
 Identities = 33/131 (25%), Positives = 53/131 (40%), Gaps = 51/131 (38%)

Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG--- 61
           +H+  +IH D+K +N+LL                            K++ +K++DFG   
Sbjct: 129 LHENKVIHRDIKGQNILLT---------------------------KNAEVKLVDFGVSA 161

Query: 62  ---STTYERPDQNYIVSTRHYRAPEVI-----LGLGWTYPCDIWSVGCILVELCTGE--- 110
              ST   R   N  + T ++ APEVI         +    D+WS+G   +EL  G+   
Sbjct: 162 QLDSTLGRR---NTFIGTPYWMAPEVIACDEQPDASYDARSDVWSLGITAIELADGKPPL 218

Query: 111 -------ALFQ 114
                  ALF+
Sbjct: 219 CDMHPMRALFK 229

Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin III may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. It may also function as a cargo carrier during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. The Drosophila class III myosin, called NinaC (Neither inactivation nor afterpotential protein C), is critical in normal adaptation and termination of photoresponse. Vertebrates contain two isoforms of class III myosin, IIIA and IIIB. This subfamily also includes mammalian NIK-like embryo-specific kinase (NESK), Traf2- and Nck-interacting kinase (TNIK), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6). MAP4Ks are involved in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Length = 275

>gnl|CDD|173708 cd05617, STKc_aPKC_zeta, Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta

 Score = 40.8 bits (95), Expect = 4e-04
 Identities = 31/112 (27%), Positives = 50/112 (44%), Gaps = 30/112 (26%)

Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDY---KSSLHTPKDSSYFKRMPKSSAIKVIDFG 61
           +H+  +I+ DLK +NVLL +  +IK+ DY   K  L     +S F   P           
Sbjct: 112 LHERGIIYRDLKLDNVLLDADGHIKLTDYGMCKEGLGPGDTTSTFCGTP----------- 160

Query: 62  STTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALF 113
                    NYI       APE++ G  + +  D W++G ++ E+  G + F
Sbjct: 161 ---------NYI-------APEILRGEEYGFSVDWWALGVLMFEMMAGRSPF 196

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways. PKC-zeta also plays a central role in maintaining cell polarity in yeast and mammalian cells. In addition, it affects actin remodeling in muscle cells. Length = 327

>gnl|CDD|132950 cd06619, PKc_MKK5, Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5

 Score = 40.2 bits (94), Expect = 4e-04
 Identities = 27/102 (26%), Positives = 45/102 (44%), Gaps = 26/102 (25%)

Query: 8   LCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYER 67
           L ++H D+KP N+L+ +   +K+ D+  S                   ++++  + TY  
Sbjct: 114 LKILHRDVKPSNMLVNTRGQVKLCDFGVS------------------TQLVNSIAKTY-- 153

Query: 68  PDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG 109
                 V T  Y APE I G  +    D+WS+G   +EL  G
Sbjct: 154 ------VGTNAYMAPERISGEQYGIHSDVWSLGISFMELALG 189

Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that phosphorylates its downstream target, extracellular signal-regulated kinase 5 (ERK5), on specific threonine and tyrosine residues. MKK5 is activated by MEKK2 and MEKK3 in response to mitogenic and stress stimuli. The ERK5 cascade promotes cell proliferation, differentiation, neuronal survival, and neuroprotection. This cascade plays an essential role in heart development. Mice deficient in either ERK5 or MKK5 die around embryonic day 10 due to cardiovascular defects including underdevelopment of the myocardium. In addition, MKK5 is associated with metastasis and unfavorable prognosis in prostate cancer. Length = 279

>gnl|CDD|173683 cd05592, STKc_nPKC_theta_delta, Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta

 Score = 40.5 bits (95), Expect = 4e-04
 Identities = 29/112 (25%), Positives = 47/112 (41%), Gaps = 30/112 (26%)

Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDY---KSSLHTPKDSSYFKRMPKSSAIKVIDFG 61
           +H   +I+ DLK +NVLL    +IK+ D+   K +++    +S F               
Sbjct: 112 LHKKGIIYRDLKLDNVLLDKDGHIKIADFGMCKENMNGEGKASTF--------------- 156

Query: 62  STTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALF 113
                         T  Y APE++ G  +    D WS G +L E+  G++ F
Sbjct: 157 ------------CGTPDYIAPEILKGQKYNESVDWWSFGVLLYEMLIGQSPF 196

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in several aspects of T-cell biology. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. Length = 316

>gnl|CDD|173771 cd08529, STKc_FA2-like, Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains

 Score = 40.2 bits (94), Expect = 5e-04
 Identities = 19/62 (30%), Positives = 32/62 (51%), Gaps = 3/62 (4%)

Query: 55  IKVIDFGSTTYERPDQNY---IVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEA 111
           +K+ D G       + N+   IV T +Y +PE+     +    D+W++G +L E CTG+ 
Sbjct: 140 VKIGDLGVAKLLSDNTNFANTIVGTPYYLSPELCEDKPYNEKSDVWALGVVLYECCTGKH 199

Query: 112 LF 113
            F
Sbjct: 200 PF 201

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cycle progression. No cellular function has yet been ascribed to CNK4. Length = 256

>gnl|CDD|173705 cd05614, STKc_MSK2_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2

 Score = 40.3 bits (94), Expect = 5e-04
 Identities = 37/151 (24%), Positives = 60/151 (39%), Gaps = 41/151 (27%)

Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDY---KSSLHTPKDSSYFKRMPKSSAIKVIDFG 61
           +H L +++ D+K EN+LL S  ++ + D+   K  L   K+ +Y              F 
Sbjct: 121 LHKLGIVYRDIKLENILLDSEGHVVLTDFGLSKEFLSEEKERTY-------------SFC 167

Query: 62  STTYERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHENLE 120
            T               Y APE+I G  G     D WS+G ++ EL TG + F       
Sbjct: 168 GTI-------------EYMAPEIIRGKGGHGKAVDWWSLGILIFELLTGASPFTLEGERN 214

Query: 121 HLAMMER-----------VLGPLPQHMLKRV 140
             + + R            +GP  Q +L ++
Sbjct: 215 TQSEVSRRILKCDPPFPSFIGPEAQDLLHKL 245

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydrophobic motif (HM) of NTD, which facilitates the phosphorylation of the A-loop and activates the NTD, which in turn phosphorylates downstream targets. MSK2 and MSK1 play nonredundant roles in activating histone H3 kinases, which play pivotal roles in compaction of the chromatin fiber. MSK2 is the required H3 kinase in response to stress stimuli and activation of the p38 MAPK pathway. MSK2 also plays a role in the pathogenesis of psoriasis. Length = 332

>gnl|CDD|132949 cd06618, PKc_MKK7, Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7

 Score = 40.0 bits (94), Expect = 5e-04
 Identities = 36/126 (28%), Positives = 50/126 (39%), Gaps = 29/126 (23%)

Query: 11  IHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTY---ER 67
           IH D+KP N+LL +S  +K+ D+  S           R+  S A K    G   Y   ER
Sbjct: 137 IHRDVKPSNILLDASGNVKLCDFGIS----------GRLVDSKA-KTRSAGCAAYMAPER 185

Query: 68  PDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMER 127
            D          RA             D+WS+G  LVEL TG+  F          ++ +
Sbjct: 186 IDPPDPNPKYDIRA-------------DVWSLGISLVELATGQ--FPYKNCKTEFEVLTK 230

Query: 128 VLGPLP 133
           +L   P
Sbjct: 231 ILQEEP 236

Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates its downstream target, c-Jun N-terminal kinase (JNK), on specific threonine and tyrosine residues. Although MKK7 is capable of dual phosphorylation, it prefers to phosphorylate the threonine residue of JNK. Thus, optimal activation of JNK requires both MKK4 (not included in this subfamily) and MKK7. MKK7 is primarily activated by cytokines. MKK7 is essential for liver formation during embryogenesis. It plays roles in G2/M cell cycle arrest and cell growth. In addition, it is involved in the control of programmed cell death, which is crucial in oncogenesis, cancer chemoresistance, and antagonism to TNFalpha-induced killing, through its inhibition by Gadd45beta and the subsequent suppression of the JNK cascade. Length = 296

>gnl|CDD|173662 cd05571, STKc_PKB, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B

 Score = 39.8 bits (93), Expect = 7e-04
 Identities = 34/129 (26%), Positives = 53/129 (41%), Gaps = 26/129 (20%)

Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           +H   +++ DLK EN++L    +IK+ D+               + K      I  G+T 
Sbjct: 111 LHSCDVVYRDLKLENLMLDKDGHIKITDFG--------------LCKEG----ISDGATM 152

Query: 65  YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALF--QTHENLEHL 122
                      T  Y APEV+    +    D W +G ++ E+  G   F  Q HE L  L
Sbjct: 153 ------KTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFEL 206

Query: 123 AMMERVLGP 131
            +ME +  P
Sbjct: 207 ILMEEIRFP 215

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having been implicated in tumor initiation, progression, and metastasis. Length = 323

>gnl|CDD|132969 cd06638, STKc_myosinIIIA, Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin

 Score = 39.6 bits (92), Expect = 7e-04
 Identities = 31/114 (27%), Positives = 46/114 (40%), Gaps = 35/114 (30%)

Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGST- 63
           +H    IH D+K  N+LL +                              +K++DFG + 
Sbjct: 140 LHVNKTIHRDVKGNNILLTT---------------------------EGGVKLVDFGVSA 172

Query: 64  --TYERPDQNYIVSTRHYRAPEVI-----LGLGWTYPCDIWSVGCILVELCTGE 110
             T  R  +N  V T  + APEVI     L   +   CD+WS+G   +EL  G+
Sbjct: 173 QLTSTRLRRNTSVGTPFWMAPEVIACEQQLDSTYDARCDVWSLGITAIELGDGD 226

Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear hair cells. It is localized to the distal ends of actin-bundled structures. Mutations in human myosin IIIA are responsible for progressive nonsyndromic hearing loss. Human myosin IIIA possesses ATPase and kinase activities, and the ability to move actin filaments in a motility assay. It may function as a cellular transporter capable of moving along actin bundles in sensory cells. Length = 286

>gnl|CDD|132942 cd06611, STKc_SLK_like, Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases

 Score = 39.7 bits (93), Expect = 7e-04
 Identities = 27/111 (24%), Positives = 42/111 (37%), Gaps = 29/111 (26%)

Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           +H   +IH DLK  N+LL     +K+ D+  S                            
Sbjct: 119 LHSHKVIHRDLKAGNILLTLDGDVKLADFGVS------------------------AKNK 154

Query: 65  YERPDQNYIVSTRHYRAPEVIL-----GLGWTYPCDIWSVGCILVELCTGE 110
                ++  + T ++ APEV+         + Y  DIWS+G  L+EL   E
Sbjct: 155 STLQKRDTFIGTPYWMAPEVVACETFKDNPYDYKADIWSLGITLIELAQME 205

Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. SmSLK is capable of activating the MAPK Jun N-terminal kinase (JNK) pathway in human embryonic kidney (HEK) cells as well as in Xenopus oocytes. It may participate in regulating MAPK cascades during host-parasite interactions. Length = 280

>gnl|CDD|173684 cd05593, STKc_PKB_gamma, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma

 Score = 39.7 bits (92), Expect = 8e-04
 Identities = 32/129 (24%), Positives = 51/129 (39%), Gaps = 26/129 (20%)

Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           +H   +++ DLK EN++L    +IK+ D+        D++  K                 
Sbjct: 111 LHSGKIVYRDLKLENLMLDKDGHIKITDFGLCKEGITDAATMKTF--------------- 155

Query: 65  YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALF--QTHENLEHL 122
                      T  Y APEV+    +    D W +G ++ E+  G   F  Q HE L  L
Sbjct: 156 ---------CGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFEL 206

Query: 123 AMMERVLGP 131
            +ME +  P
Sbjct: 207 ILMEDIKFP 215

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulated in estrogen-deficient breast cancer cells, androgen-independent prostate cancer cells, and primary ovarian tumors. It acts as a key mediator in the genesis of ovarian cancer. Length = 328

>gnl|CDD|173666 cd05575, STKc_SGK, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase

 Score = 39.8 bits (93), Expect = 8e-04
 Identities = 29/108 (26%), Positives = 45/108 (41%), Gaps = 30/108 (27%)

Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDY---KSSLHTPKDSSYFKRMPKSSAIKVIDFG 61
           +H L +I+ DLKPEN+LL S  ++ + D+   K  +   K +S F   P+          
Sbjct: 112 LHSLNIIYRDLKPENILLDSQGHVVLTDFGLCKEGIEHSKTTSTFCGTPE---------- 161

Query: 62  STTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG 109
                            Y APEV+    +    D W +G +L E+  G
Sbjct: 162 -----------------YLAPEVLRKQPYDRTVDWWCLGAVLYEMLYG 192

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell proliferation, and apoptosis. Length = 323

>gnl|CDD|240344 PTZ00283, PTZ00283, serine/threonine protein kinase; Provisional

 Score = 39.9 bits (93), Expect = 0.001
 Identities = 39/133 (29%), Positives = 60/133 (45%), Gaps = 29/133 (21%)

Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           +H   MIH D+K  N+LL S+  +K+ D+            F +M   +A    D G T 
Sbjct: 159 VHSKHMIHRDIKSANILLCSNGLVKLGDFG-----------FSKM--YAATVSDDVGRT- 204

Query: 65  YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAM 124
                      T +Y APE+     ++   D++S+G +L EL T +  F   EN+E +  
Sbjct: 205 --------FCGTPYYVAPEIWRRKPYSKKADMFSLGVLLYELLTLKRPFDG-ENMEEV-- 253

Query: 125 MERVLG----PLP 133
           M + L     PLP
Sbjct: 254 MHKTLAGRYDPLP 266

Length = 496

>gnl|CDD|173703 cd05612, STKc_PRKX_like, Catalytic domain of PRKX-like Protein Serine/Threonine Kinases

 Score = 39.3 bits (92), Expect = 0.001
 Identities = 29/105 (27%), Positives = 44/105 (41%), Gaps = 27/105 (25%)

Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           +H   +++ DLKPEN+LL    +IK+ D+                    A K+ D   T 
Sbjct: 117 LHSKEIVYRDLKPENILLDKEGHIKLTDF------------------GFAKKLRDRTWT- 157

Query: 65  YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG 109
                   +  T  Y APEVI   G     D W++G ++ E+  G
Sbjct: 158 --------LCGTPEYLAPEVIQSKGHNKAVDWWALGILIYEMLVG 194

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyte/macrophage lineage differentiation, renal cell epithelial migration, and tubular morphogenesis in the developing kidney. Length = 291

>gnl|CDD|173695 cd05604, STKc_SGK3, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3

 Score = 39.2 bits (91), Expect = 0.001
 Identities = 32/130 (24%), Positives = 50/130 (38%), Gaps = 27/130 (20%)

Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           +H + +++ DLKPEN+LL S  ++ + D+                     I   D  +T 
Sbjct: 112 LHSINIVYRDLKPENILLDSQGHVVLTDFGLC---------------KEGIAQSDTTTT- 155

Query: 65  YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALF---QTHENLEH 121
                      T  Y APEVI    +    D W +G +L E+  G   F      E  ++
Sbjct: 156 --------FCGTPEYLAPEVIRKQPYDNTVDWWCLGAVLYEMLYGLPPFYCRDVAEMYDN 207

Query: 122 LAMMERVLGP 131
           +     VL P
Sbjct: 208 ILHKPLVLRP 217

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels, and receptors. It plays a critical role in hair follicle morphogenesis and hair cycling. Length = 325

>gnl|CDD|133247 cd05116, PTKc_Syk, Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase

 Score = 39.2 bits (91), Expect = 0.001
 Identities = 30/118 (25%), Positives = 49/118 (41%), Gaps = 22/118 (18%)

Query: 11  IHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ 70
           +H DL   NVLLV+  Y K+ D+  S     D +Y+K               T  + P +
Sbjct: 117 VHRDLAARNVLLVTQHYAKISDFGLSKALGADENYYK-------------AKTHGKWPVK 163

Query: 71  NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVE-LCTGEALFQTHENLEHLAMMER 127
            Y        APE +    ++   D+WS G ++ E    G+  ++  +  E   M+E 
Sbjct: 164 WY--------APECMNYYKFSSKSDVWSFGVLMWEAFSYGQKPYKGMKGNEVTQMIES 213

Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, migration, and phagocytosis. More recently, Syk expression has been detected in other cell types (including epithelial cells, vascular endothelial cells, neurons, hepatocytes, and melanocytes), suggesting a variety of biological functions in non-immune cells. Syk plays a critical role in maintaining vascular integrity and in wound healing during embryogenesis. It also regulates Vav3, which is important in osteoclast function including bone development. In breast epithelial cells, where Syk acts as a negative regulator for epidermal growth factor receptor (EGFR) signaling, loss of Syk expression is associated with abnormal proliferation during cancer development suggesting a potential role as a tumor suppressor. In mice, Syk has been shown to inhibit malignant transformation of mammary epithelial cells induced with murine mammary tumor virus (MMTV). Length = 257

>gnl|CDD|143342 cd07837, STKc_CdkB_plant, Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase

 Score = 38.3 bits (89), Expect = 0.002
 Identities = 15/25 (60%), Positives = 20/25 (80%)

Query: 221 LLQGLLRYDPTDRLTAREALRHPFF 245
           LLQ +LRYDP  R++A+ AL HP+F
Sbjct: 270 LLQKMLRYDPAKRISAKAALTHPYF 294

Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developmental pathways, such as stomata and leaf development. CdkB has been shown to associate with both cyclin B, which controls G2/M transition, and cyclin D, which acts as a mediator in linking extracellular signals to the cell cycle. Length = 295

>gnl|CDD|132974 cd06643, STKc_SLK, Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase

 Score = 38.5 bits (89), Expect = 0.002
 Identities = 27/107 (25%), Positives = 45/107 (42%), Gaps = 29/107 (27%)

Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           +H+  +IH DLK  N+L      IK+ D+  S    +                      T
Sbjct: 119 LHENKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTR----------------------T 156

Query: 65  YERPDQNYIVSTRHYRAPEVIL-----GLGWTYPCDIWSVGCILVEL 106
            +R D    + T ++ APEV++        + Y  D+WS+G  L+E+
Sbjct: 157 IQRRDS--FIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEM 201

Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration. Length = 282

>gnl|CDD|173631 cd05045, PTKc_RET, Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein

 Score = 38.4 bits (89), Expect = 0.002
 Identities = 24/106 (22%), Positives = 42/106 (39%), Gaps = 22/106 (20%)

Query: 3   AVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGS 62
             + ++ ++H DL   NVL+     +K+ D+  S    ++ SY KR      +K      
Sbjct: 141 QYLAEMKLVHRDLAARNVLVAEGRKMKISDFGLSRDVYEEDSYVKRSKGRIPVK------ 194

Query: 63  TTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT 108
                           + A E +    +T   D+WS G +L E+ T
Sbjct: 195 ----------------WMAIESLFDHIYTTQSDVWSFGVLLWEIVT 224

Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leading to autophosphorylation, activation, and intracellular signaling. RET is essential for the development of the sympathetic, parasympathetic and enteric nervous systems, and the kidney. RET disruption by germline mutations causes diseases in humans including congenital aganglionosis of the gastrointestinal tract (Hirschsprung's disease) and three related inherited cancers: multiple endocrine neoplasia type 2A (MEN2A), MEN2B, and familial medullary thyroid carcinoma (FMTC). Length = 290

>gnl|CDD|173729 cd06617, PKc_MKK3_6, Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6

 Score = 38.2 bits (89), Expect = 0.002
 Identities = 31/106 (29%), Positives = 45/106 (42%), Gaps = 29/106 (27%)

Query: 8   LCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYER 67
           L +IH D+KP NVL+  +  +K+ D+  S +              S  K ID G      
Sbjct: 123 LSVIHRDVKPSNVLINRNGQVKLCDFGISGYL-----------VDSVAKTIDAGC----- 166

Query: 68  PDQNYIVSTRHYRAPEVILG----LGWTYPCDIWSVGCILVELCTG 109
                    + Y APE I       G+    D+WS+G  ++EL TG
Sbjct: 167 ---------KPYMAPERINPELNQKGYDVKSDVWSLGITMIELATG 203

Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs that phosphorylate and activate their downstream target, p38 MAPK, on specific threonine and tyrosine residues. MKK3/6 plays roles in the regulation of cell cycle progression, cytokine- and stress-induced apoptosis, oncogenic transformation, and adult tissue regeneration. In addition, MKK6 plays a critical role in osteoclast survival in inflammatory disease while MKK3 is associated with tumor invasion, progression, and poor patient survival in glioma. Length = 283

>gnl|CDD|132968 cd06637, STKc_TNIK, Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase

 Score = 38.2 bits (88), Expect = 0.002
 Identities = 37/176 (21%), Positives = 73/176 (41%), Gaps = 40/176 (22%)

Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG-ST 63
           +H   +IH D+K +NVLL                            +++ +K++DFG S 
Sbjct: 127 LHQHKVIHRDIKGQNVLLT---------------------------ENAEVKLVDFGVSA 159

Query: 64  TYERP--DQNYIVSTRHYRAPEVIL-----GLGWTYPCDIWSVGCILVELCTGEALFQTH 116
             +R    +N  + T ++ APEVI         + +  D+WS+G   +E+  G       
Sbjct: 160 QLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDM 219

Query: 117 ENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLP 172
             +  L ++ R   P P+   K+  +  + ++    +   +  + R + + +MK P
Sbjct: 220 HPMRALFLIPR--NPAPRLKSKKWSKKFQSFIESCLV---KNHSQRPTTEQLMKHP 270

Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activates the c-Jun N-terminal kinase (JNK) pathway and plays a role in regulating the actin cytoskeleton. Length = 272

>gnl|CDD|133246 cd05115, PTKc_Zap-70, Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa

 Score = 38.0 bits (88), Expect = 0.002
 Identities = 33/135 (24%), Positives = 55/135 (40%), Gaps = 32/135 (23%)

Query: 4   VMHDLCM----------IHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSS 53
           +MH + M          +H DL   NVLLV+  Y K+ D+  S     D SY+K      
Sbjct: 100 LMHQVSMGMKYLEGKNFVHRDLAARNVLLVNQHYAKISDFGLSKALGADDSYYK------ 153

Query: 54  AIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVE-LCTGEAL 112
                    +  + P + Y        APE I    ++   D+WS G  + E    G+  
Sbjct: 154 -------ARSAGKWPLKWY--------APECINFRKFSSRSDVWSYGITMWEAFSYGQKP 198

Query: 113 FQTHENLEHLAMMER 127
           ++  +  E ++ +E+
Sbjct: 199 YKKMKGPEVMSFIEQ 213

Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its phosphorylation and activation. It then phosphorylates target proteins, which propagate the signals to downstream pathways. Zap-70 is hardly detected in normal peripheral B-cells, but is present in some B-cell malignancies. It is used as a diagnostic marker for chronic lymphocytic leukemia (CLL) as it is associated with the more aggressive subtype of the disease. Length = 257

>gnl|CDD|173693 cd05602, STKc_SGK1, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1

 Score = 37.7 bits (87), Expect = 0.004
 Identities = 30/119 (25%), Positives = 48/119 (40%), Gaps = 30/119 (25%)

Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDY---KSSLHTPKDSSYFKRMPKSSAIKVIDFG 61
           +H L +++ DLKPEN+LL S  +I + D+   K ++     +S F   P+          
Sbjct: 112 LHSLNIVYRDLKPENILLDSQGHIVLTDFGLCKENIEHNGTTSTFCGTPE---------- 161

Query: 62  STTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLE 120
                            Y APEV+    +    D W +G +L E+  G   F +    E
Sbjct: 162 -----------------YLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAE 203

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt sensitivity, memory consolidation, and cardiac repolarization. A common SGK1 variant is associated with increased blood pressure and body weight. SGK1 may also contribute to tumor growth, neurodegeneration, fibrosing disease, and ischemia. Length = 325

>gnl|CDD|173686 cd05595, STKc_PKB_beta, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta

 Score = 37.7 bits (87), Expect = 0.004
 Identities = 31/129 (24%), Positives = 50/129 (38%), Gaps = 26/129 (20%)

Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           +H   +++ D+K EN++L    +IK+ D+        D +  K                 
Sbjct: 111 LHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTF--------------- 155

Query: 65  YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALF--QTHENLEHL 122
                      T  Y APEV+    +    D W +G ++ E+  G   F  Q HE L  L
Sbjct: 156 ---------CGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFEL 206

Query: 123 AMMERVLGP 131
            +ME +  P
Sbjct: 207 ILMEEIRFP 215

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in PKB-beta display normal growth weights but exhibit severe insulin resistance and diabetes, accompanied by lipoatrophy and B-cell failure. Length = 323

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	252
KOG0671	415	consensus LAMMER dual specificity kinases [Signal	100.0
KOG0667	586	consensus Dual-specificity tyrosine-phosphorylatio	100.0
KOG0660	359	consensus Mitogen-activated protein kinase [Signal	100.0
KOG0615	475	consensus Serine/threonine protein kinase Chk2 and	100.0
KOG0661	538	consensus MAPK related serine/threonine protein ki	100.0
KOG0593	396	consensus Predicted protein kinase KKIAMRE [Genera	100.0
KOG0033	355	consensus Ca2+/calmodulin-dependent protein kinase	100.0
KOG0659	318	consensus Cdk activating kinase (CAK)/RNA polymera	100.0
KOG0592	604	consensus 3-phosphoinositide-dependent protein kin	100.0
KOG0658	364	consensus Glycogen synthase kinase-3 [Carbohydrate	100.0
KOG0663	419	consensus Protein kinase PITSLRE and related kinas	100.0
KOG0594	323	consensus Protein kinase PCTAIRE and related kinas	100.0
KOG0581	364	consensus Mitogen-activated protein kinase kinase	100.0
KOG0575	592	consensus Polo-like serine/threonine protein kinas	100.0
KOG0600	560	consensus Cdc2-related protein kinase [Cell cycle	100.0
PTZ00284	467	protein kinase; Provisional	100.0
KOG0598	357	consensus Ribosomal protein S6 kinase and related	100.0
KOG0665	369	consensus Jun-N-terminal kinase (JNK) [Signal tran	100.0
KOG0588	786	consensus Serine/threonine protein kinase [Cell cy	100.0
KOG0599	411	consensus Phosphorylase kinase gamma subunit [Carb	100.0
KOG0604	400	consensus MAP kinase-activated protein kinase 2 [S	100.0
KOG0578	550	consensus p21-activated serine/threonine protein k	100.0
cd07871	288	STKc_PCTAIRE3 Catalytic domain of the Serine/Threo	100.0
cd07848	287	STKc_CDKL5 Catalytic domain of the Serine/Threonin	100.0
KOG0666	438	consensus Cyclin C-dependent kinase CDK8 [Transcri	100.0
KOG0616	355	consensus cAMP-dependent protein kinase catalytic	100.0
PTZ00036	440	glycogen synthase kinase; Provisional	100.0
cd07875	364	STKc_JNK1 Catalytic domain of the Serine/Threonine	100.0
cd07876	359	STKc_JNK2 Catalytic domain of the Serine/Threonine	100.0
cd07868	317	STKc_CDK8 Catalytic domain of the Serine/Threonine	100.0
KOG0583	370	consensus Serine/threonine protein kinase [Signal	100.0
cd07878	343	STKc_p38beta_MAPK11 Catalytic domain of the Serine	100.0
KOG0605	550	consensus NDR and related serine/threonine kinases	100.0
cd07859	338	STKc_TDY_MAPK_plant Catalytic domain of the Serine	100.0
cd07862	290	STKc_CDK6 Catalytic domain of the Serine/Threonine	100.0
cd07853	372	STKc_NLK Catalytic domain of the Serine/Threonine	99.98
cd07874	355	STKc_JNK3 Catalytic domain of the Serine/Threonine	99.98
cd07869	303	STKc_PFTAIRE1 Catalytic domain of the Serine/Threo	99.97
KOG0694	694	consensus Serine/threonine protein kinase [Signal	99.97
PHA03212	391	serine/threonine kinase US3; Provisional	99.97
KOG0582	516	consensus Ste20-like serine/threonine protein kina	99.97
KOG0198	313	consensus MEKK and related serine/threonine protei	99.97
cd07872	309	STKc_PCTAIRE2 Catalytic domain of the Serine/Threo	99.97
cd07867	317	STKc_CDC2L6 Catalytic domain of Serine/Threonine K	99.97
cd07863	288	STKc_CDK4 Catalytic domain of the Serine/Threonine	99.97
KOG0032	382	consensus Ca2+/calmodulin-dependent protein kinase	99.97
KOG0585	576	consensus Ca2+/calmodulin-dependent protein kinase	99.97
cd05612	291	STKc_PRKX_like Catalytic domain of PRKX-like Prote	99.97
cd05571	323	STKc_PKB Catalytic domain of the Protein Serine/Th	99.97
PHA03207	392	serine/threonine kinase US3; Provisional	99.97
PTZ00263	329	protein kinase A catalytic subunit; Provisional	99.97
KOG0669	376	consensus Cyclin T-dependent kinase CDK9 [Cell cyc	99.97
KOG0597	808	consensus Serine-threonine protein kinase FUSED [G	99.97
KOG0610	459	consensus Putative serine/threonine protein kinase	99.97
PTZ00426	340	cAMP-dependent protein kinase catalytic subunit; P	99.97
cd05631	285	STKc_GRK4 Catalytic domain of the Protein Serine/T	99.97
cd07850	353	STKc_JNK Catalytic domain of the Serine/Threonine	99.97
cd05590	320	STKc_nPKC_eta Catalytic domain of the Protein Seri	99.97
cd05585	312	STKc_YPK1_like Catalytic domain of Yeast Protein K	99.97
cd05593	328	STKc_PKB_gamma Catalytic domain of the Protein Ser	99.97
cd05620	316	STKc_nPKC_delta Catalytic domain of the Protein Se	99.97
KOG0603	612	consensus Ribosomal protein S6 kinase [Signal tran	99.97
cd07873	301	STKc_PCTAIRE1 Catalytic domain of the Serine/Threo	99.96
KOG1290	590	consensus Serine/threonine protein kinase [Signal	99.96
KOG0662	292	consensus Cyclin-dependent kinase CDK5 [Intracellu	99.96
PHA03210	501	serine/threonine kinase US3; Provisional	99.96
cd05587	324	STKc_cPKC Catalytic domain of the Protein Serine/T	99.96
PHA03209	357	serine/threonine kinase US3; Provisional	99.96
cd05591	321	STKc_nPKC_epsilon Catalytic domain of the Protein	99.96
cd07879	342	STKc_p38delta_MAPK13 Catalytic domain of the Serin	99.96
cd05600	333	STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p-	99.96
PHA03211	461	serine/threonine kinase US3; Provisional	99.96
cd05589	324	STKc_PKN Catalytic domain of the Protein Serine/Th	99.96
cd05616	323	STKc_cPKC_beta Catalytic domain of the Protein Ser	99.96
cd05592	316	STKc_nPKC_theta_delta Catalytic domain of the Prot	99.96
KOG0670	752	consensus U4/U6-associated splicing factor PRP4 [R	99.96
cd05595	323	STKc_PKB_beta Catalytic domain of the Protein Seri	99.96
KOG0664	449	consensus Nemo-like MAPK-related serine/threonine	99.96
cd05584	323	STKc_p70S6K Catalytic domain of the Protein Serine	99.96
cd05619	316	STKc_nPKC_theta Catalytic domain of the Protein Se	99.96
cd05570	318	STKc_PKC Catalytic domain of the Protein Serine/Th	99.96
cd05594	325	STKc_PKB_alpha Catalytic domain of the Protein Ser	99.96
cd06649	331	PKc_MEK2 Catalytic domain of the dual-specificity	99.96
cd07851	343	STKc_p38 Catalytic domain of the Serine/Threonine	99.96
cd07861	285	STKc_CDK1_euk Catalytic domain of the Serine/Threo	99.96
KOG0201	467	consensus Serine/threonine protein kinase [Signal	99.96
cd07839	284	STKc_CDK5 Catalytic domain of the Serine/Threonine	99.96
KOG0596	677	consensus Dual specificity; serine/threonine and t	99.96
cd07857	332	STKc_MPK1 Catalytic domain of the Serine/Threonine	99.96
cd05628	363	STKc_NDR1 Catalytic domain of the Protein Serine/T	99.96
PLN00034	353	mitogen-activated protein kinase kinase; Provision	99.96
cd05614	332	STKc_MSK2_N N-terminal catalytic domain of the Pro	99.96
cd05575	323	STKc_SGK Catalytic domain of the Protein Serine/Th	99.96
cd05608	280	STKc_GRK1 Catalytic domain of the Protein Serine/T	99.96
cd05596	370	STKc_ROCK Catalytic domain of the Protein Serine/T	99.96
cd05573	350	STKc_ROCK_NDR_like Catalytic domain of ROCK- and N	99.96
cd07849	336	STKc_ERK1_2_like Catalytic domain of Extracellular	99.96
cd05618	329	STKc_aPKC_iota Catalytic domain of the Protein Ser	99.96
cd05586	330	STKc_Sck1_like Catalytic domain of Suppressor of l	99.96
cd07877	345	STKc_p38alpha_MAPK14 Catalytic domain of the Serin	99.96
cd07860	284	STKc_CDK2_3 Catalytic domain of the Serine/Threoni	99.96
cd05588	329	STKc_aPKC Catalytic domain of the Protein Serine/T	99.96
cd07845	309	STKc_CDK10 Catalytic domain of the Serine/Threonin	99.96
KOG0595	429	consensus Serine/threonine-protein kinase involved	99.96
cd07855	334	STKc_ERK5 Catalytic domain of the Serine/Threonine	99.96
cd05621	370	STKc_ROCK2 Catalytic domain of the Protein Serine/	99.96
cd05625	382	STKc_LATS1 Catalytic domain of the Protein Serine/	99.96
cd07865	310	STKc_CDK9 Catalytic domain of the Serine/Threonine	99.96
cd05604	325	STKc_SGK3 Catalytic domain of the Protein Serine/T	99.96
KOG0591	375	consensus NIMA (never in mitosis)-related G2-speci	99.96
cd05615	323	STKc_cPKC_alpha Catalytic domain of the Protein Se	99.96
cd07880	343	STKc_p38gamma_MAPK12 Catalytic domain of the Serin	99.96
cd07831	282	STKc_MOK Catalytic domain of the Serine/Threonine	99.96
KOG0580	281	consensus Serine/threonine protein kinase [Cell cy	99.96
cd05626	381	STKc_LATS2 Catalytic domain of the Protein Serine/	99.96
cd05599	364	STKc_NDR_like Catalytic domain of Nuclear Dbf2-Rel	99.96
cd05629	377	STKc_NDR_like_fungal Catalytic domain of Fungal Nu	99.96
KOG0192	362	consensus Tyrosine kinase specific for activated (	99.96
KOG0668	338	consensus Casein kinase II, alpha subunit [Signal	99.96
KOG0579	1187	consensus Ste20-like serine/threonine protein kina	99.96
KOG0983	391	consensus Mitogen-activated protein kinase (MAPK)	99.96
cd07858	337	STKc_TEY_MAPK_plant Catalytic domain of the Serine	99.95
cd05602	325	STKc_SGK1 Catalytic domain of the Protein Serine/T	99.95
cd05630	285	STKc_GRK6 Catalytic domain of the Protein Serine/T	99.95
cd05582	318	STKc_RSK_N N-terminal catalytic domain of the Prot	99.95
KOG0986	591	consensus G protein-coupled receptor kinase [Signa	99.95
cd07837	295	STKc_CdkB_plant Catalytic domain of the Serine/Thr	99.95
cd05605	285	STKc_GRK4_like Catalytic domain of G protein-coupl	99.95
PTZ00283	496	serine/threonine protein kinase; Provisional	99.95
cd05601	330	STKc_CRIK Catalytic domain of the Protein Serine/T	99.95
PLN03225	566	Serine/threonine-protein kinase SNT7; Provisional	99.95
cd07847	286	STKc_CDKL1_4 Catalytic domain of the Serine/Threon	99.95
cd05603	321	STKc_SGK2 Catalytic domain of the Protein Serine/T	99.95
KOG4279	1226	consensus Serine/threonine protein kinase [Signal	99.95
cd07870	291	STKc_PFTAIRE2 Catalytic domain of the Serine/Threo	99.95
cd07843	293	STKc_CDC2L1 Catalytic domain of the Serine/Threoni	99.95
cd05617	327	STKc_aPKC_zeta Catalytic domain of the Protein Ser	99.95
cd07834	330	STKc_MAPK Catalytic domain of the Serine/Threonine	99.95
cd07842	316	STKc_CDK8_like Catalytic domain of Cyclin-Dependen	99.95
KOG0607	463	consensus MAP kinase-interacting kinase and relate	99.95
cd07856	328	STKc_Sty1_Hog1 Catalytic domain of the Serine/Thre	99.95
cd05627	360	STKc_NDR2 Catalytic domain of the Protein Serine/T	99.95
cd08227	327	PK_STRAD_alpha Pseudokinase domain of STE20-relate	99.95
PLN00181	793	protein SPA1-RELATED; Provisional	99.95
cd05598	376	STKc_LATS Catalytic domain of the Protein Serine/T	99.95
cd06650	333	PKc_MEK1 Catalytic domain of the dual-specificity	99.95
cd05622	371	STKc_ROCK1 Catalytic domain of the Protein Serine/	99.95
cd07832	286	STKc_CCRK Catalytic domain of the Serine/Threonine	99.95
PTZ00267	478	NIMA-related protein kinase; Provisional	99.95
KOG4717	864	consensus Serine/threonine protein kinase [Signal	99.95
cd07844	291	STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like	99.95
cd06637	272	STKc_TNIK Catalytic domain of the Protein Serine/T	99.95
cd07835	283	STKc_CDK1_like Catalytic domain of Cyclin-Dependen	99.95
cd07841	298	STKc_CDK7 Catalytic domain of the Serine/Threonine	99.95
cd06643	282	STKc_SLK Catalytic domain of the Protein Serine/Th	99.95
cd07866	311	STKc_BUR1 Catalytic domain of the Serine/Threonine	99.95
cd07833	288	STKc_CDKL Catalytic domain of Cyclin-Dependent pro	99.95
cd08223	257	STKc_Nek4 Catalytic domain of the Protein Serine/T	99.95
cd05607	277	STKc_GRK7 Catalytic domain of the Protein Serine/T	99.95
PTZ00024	335	cyclin-dependent protein kinase; Provisional	99.95
cd07829	282	STKc_CDK_like Catalytic domain of Cyclin-Dependent	99.95
cd05632	285	STKc_GRK5 Catalytic domain of the Protein Serine/T	99.95
cd05118	283	STKc_CMGC Catalytic domain of CMGC family Serine/T	99.95
cd06625	263	STKc_MEKK3_like Catalytic domain of MAP/ERK kinase	99.95
cd06616	288	PKc_MKK4 Catalytic domain of the dual-specificity	99.95
KOG0690	516	consensus Serine/threonine protein kinase [Signal	99.95
cd06658	292	STKc_PAK5 Catalytic domain of the Protein Serine/T	99.95
PLN00009	294	cyclin-dependent kinase A; Provisional	99.95
cd07852	337	STKc_MAPK15 Catalytic domain of the Serine/Threoni	99.95
PF00069	260	Pkinase: Protein kinase domain Protein kinase; unc	99.95
KOG0197	468	consensus Tyrosine kinases [Signal transduction me	99.95
cd07846	286	STKc_CDKL2_3 Catalytic domain of the Serine/Threon	99.95
cd06655	296	STKc_PAK2 Catalytic domain of the Protein Serine/T	99.95
cd06654	296	STKc_PAK1 Catalytic domain of the Protein Serine/T	99.95
cd05623	332	STKc_MRCK_alpha Catalytic domain of the Protein Se	99.95
cd06636	282	STKc_MAP4K4_6 Catalytic domain of the Protein Seri	99.95
cd07840	287	STKc_CDK9_like Catalytic domain of Cyclin-Dependen	99.94
cd05574	316	STKc_phototropin_like Catalytic domain of Phototro	99.94
cd05580	290	STKc_PKA Catalytic domain of the Protein Serine/Th	99.94
cd07836	284	STKc_Pho85 Catalytic domain of the Serine/Threonin	99.94
cd07854	342	STKc_MAPK4_6 Catalytic domain of the Serine/Threon	99.94
cd05633	279	STKc_GRK3 Catalytic domain of the Protein Serine/T	99.94
cd06619	279	PKc_MKK5 Catalytic domain of the dual-specificity	99.94
cd06609	274	STKc_MST3_like Catalytic domain of Mammalian Ste20	99.94
KOG0589	426	consensus Serine/threonine protein kinase [General	99.94
cd06628	267	STKc_MAPKKK_Byr2_like Catalytic domain of fungal B	99.94
KOG0577	948	consensus Serine/threonine protein kinase [Signal	99.94
cd07838	287	STKc_CDK4_6_like Catalytic domain of Cyclin-Depend	99.94
PHA03390	267	pk1 serine/threonine-protein kinase 1; Provisional	99.94
cd05597	331	STKc_DMPK_like Catalytic domain of Myotonic Dystro	99.94
cd06659	297	STKc_PAK6 Catalytic domain of the Protein Serine/T	99.94
cd06648	285	STKc_PAK_II Catalytic domain of the Protein Serine	99.94
cd08216	314	PK_STRAD Pseudokinase domain of STE20-related kina	99.94
cd05102	338	PTKc_VEGFR3 Catalytic domain of the Protein Tyrosi	99.94
cd06656	297	STKc_PAK3 Catalytic domain of the Protein Serine/T	99.94
cd06631	265	STKc_YSK4 Catalytic domain of the Protein Serine/T	99.94
cd06644	292	STKc_STK10_LOK Catalytic domain of the Protein Ser	99.94
cd06612	256	STKc_MST1_2 Catalytic domain of the Protein Serine	99.94
cd06639	291	STKc_myosinIIIB Catalytic domain of the Protein Se	99.94
cd08529	256	STKc_FA2-like Catalytic domain of the Protein Seri	99.94
cd06651	266	STKc_MEKK3 Catalytic domain of the Protein Serine/	99.94
cd07864	302	STKc_CDK12 Catalytic domain of the Serine/Threonin	99.94
cd06610	267	STKc_OSR1_SPAK Catalytic domain of the Protein Ser	99.94
KOG4236	888	consensus Serine/threonine protein kinase PKC mu/P	99.94
cd07830	283	STKc_MAK_like Catalytic domain of Male germ cell-A	99.94
cd05611	260	STKc_Rim15_like Catalytic domain of fungal Rim15-l	99.94
cd06615	308	PKc_MEK Catalytic domain of the dual-specificity P	99.94
cd05572	262	STKc_cGK_PKG Catalytic domain of the Protein Serin	99.94
cd06622	286	PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS	99.94
cd05606	278	STKc_beta_ARK Catalytic domain of the Protein Seri	99.94
KOG1167	418	consensus Serine/threonine protein kinase of the C	99.94
KOG0612	1317	consensus Rho-associated, coiled-coil containing p	99.94
PHA02988	283	hypothetical protein; Provisional	99.94
cd05609	305	STKc_MAST Catalytic domain of the Protein Serine/T	99.94
KOG0696	683	consensus Serine/threonine protein kinase [Signal	99.94
cd06645	267	STKc_MAP4K3 Catalytic domain of the Protein Serine	99.94
KOG4645	1509	consensus MAPKKK (MAP kinase kinase kinase) SSK2 a	99.94
cd05624	331	STKc_MRCK_beta Catalytic domain of the Protein Ser	99.94
cd08226	328	PK_STRAD_beta Pseudokinase domain of STE20-related	99.94
cd06633	313	STKc_TAO3 Catalytic domain of the Protein Serine/T	99.94
cd06624	268	STKc_ASK Catalytic domain of the Protein Serine/Th	99.94
cd06608	275	STKc_myosinIII_like Catalytic domain of Class III	99.94
cd06611	280	STKc_SLK_like Catalytic domain of Ste20-like kinas	99.94
cd06652	265	STKc_MEKK2 Catalytic domain of the Protein Serine/	99.94
cd08220	256	STKc_Nek8 Catalytic domain of the Protein Serine/T	99.93
cd08218	256	STKc_Nek1 Catalytic domain of the Protein Serine/T	99.93
cd05577	277	STKc_GRK Catalytic domain of the Protein Serine/Th	99.93
cd06638	286	STKc_myosinIIIA Catalytic domain of the Protein Se	99.93
PTZ00266	1021	NIMA-related protein kinase; Provisional	99.93
cd05576	237	STKc_RPK118_like Catalytic domain of the Protein S	99.93
KOG4721	904	consensus Serine/threonine protein kinase, contain	99.93
cd06657	292	STKc_PAK4 Catalytic domain of the Protein Serine/T	99.93
cd06617	283	PKc_MKK3_6 Catalytic domain of the dual-specificit	99.93
cd06629	272	STKc_MAPKKK_Bck1_like Catalytic domain of fungal B	99.93
cd05054	337	PTKc_VEGFR Catalytic domain of the Protein Tyrosin	99.93
cd06607	307	STKc_TAO Catalytic domain of the Protein Serine/Th	99.93
KOG0614	732	consensus cGMP-dependent protein kinase [Signal tr	99.93
cd06605	265	PKc_MAPKK Catalytic domain of the dual-specificity	99.93
cd06640	277	STKc_MST4 Catalytic domain of the Protein Serine/T	99.93
PHA02882	294	putative serine/threonine kinase; Provisional	99.93
cd06613	262	STKc_MAP4K3_like Catalytic domain of Mitogen-activ	99.93
cd06621	287	PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek	99.93
cd08217	265	STKc_Nek2 Catalytic domain of the Protein Serine/T	99.93
cd06632	258	STKc_MEKK1_plant Catalytic domain of the Protein S	99.93
cd05579	265	STKc_MAST_like Catalytic domain of Microtubule-ass	99.93
cd06634	308	STKc_TAO2 Catalytic domain of the Protein Serine/T	99.93
cd08221	256	STKc_Nek9 Catalytic domain of the Protein Serine/T	99.93
cd06642	277	STKc_STK25-YSK1 Catalytic domain of the Protein Se	99.93
cd06647	293	STKc_PAK_I Catalytic domain of the Protein Serine/	99.93
cd05122	253	PKc_STE Catalytic domain of STE family Protein Kin	99.93
KOG0574	502	consensus STE20-like serine/threonine kinase MST [	99.93
cd05091	283	PTKc_Ror2 Catalytic domain of the Protein Tyrosine	99.93
cd05048	283	PTKc_Ror Catalytic Domain of the Protein Tyrosine	99.93
cd06646	267	STKc_MAP4K5 Catalytic domain of the Protein Serine	99.93
cd06630	268	STKc_MEKK1 Catalytic domain of the Protein Serine/	99.93
cd08225	257	STKc_Nek5 Catalytic domain of the Protein Serine/T	99.93
cd05123	250	STKc_AGC Catalytic domain of AGC family Protein Se	99.93
cd05581	280	STKc_PDK1 Catalytic domain of the Protein Serine/T	99.93
KOG0611	668	consensus Predicted serine/threonine protein kinas	99.93
cd05106	374	PTKc_CSF-1R Catalytic domain of the Protein Tyrosi	99.93
cd06635	317	STKc_TAO1 Catalytic domain of the Protein Serine/T	99.93
cd05578	258	STKc_Yank1 Catalytic domain of the Protein Serine/	99.93
cd06626	264	STKc_MEKK4 Catalytic domain of the Protein Serine/	99.93
cd05096	304	PTKc_DDR1 Catalytic domain of the Protein Tyrosine	99.93
cd06618	296	PKc_MKK7 Catalytic domain of the dual-specificity	99.93
cd08215	258	STKc_Nek Catalytic domain of the Protein Serine/Th	99.93
cd05082	256	PTKc_Csk Catalytic domain of the Protein Tyrosine	99.92
cd05075	272	PTKc_Axl Catalytic domain of the Protein Tyrosine	99.92
cd05061	288	PTKc_InsR Catalytic domain of the Protein Tyrosine	99.92
cd06917	277	STKc_NAK1_like Catalytic domain of Fungal Nak1-lik	99.92
cd05049	280	PTKc_Trk Catalytic domain of the Protein Tyrosine	99.92
cd05089	297	PTKc_Tie1 Catalytic domain of the Protein Tyrosine	99.92
cd05093	288	PTKc_TrkB Catalytic domain of the Protein Tyrosine	99.92
cd05104	375	PTKc_Kit Catalytic domain of the Protein Tyrosine	99.92
cd08222	260	STKc_Nek11 Catalytic domain of the Protein Serine/	99.92
cd06627	254	STKc_Cdc7_like Catalytic domain of Cell division c	99.92
cd05052	263	PTKc_Abl Catalytic domain of the Protein Tyrosine	99.92
cd06620	284	PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr	99.92
cd06614	286	STKc_PAK Catalytic domain of the Protein Serine/Th	99.92
KOG2345	302	consensus Serine/threonine protein kinase/TGF-beta	99.92
cd05094	291	PTKc_TrkC Catalytic domain of the Protein Tyrosine	99.92
cd05035	273	PTKc_Axl_like Catalytic Domain of Axl-like Protein	99.92
cd05108	316	PTKc_EGFR Catalytic domain of the Protein Tyrosine	99.92
cd05036	277	PTKc_ALK_LTK Catalytic domain of the Protein Tyros	99.92
KOG1035	1351	consensus eIF-2alpha kinase GCN2 [Translation, rib	99.92
cd05078	258	PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain	99.92
cd06623	264	PKc_MAPKK_plant_like Catalytic domain of Plant dua	99.92
cd05062	277	PTKc_IGF-1R Catalytic domain of the Protein Tyrosi	99.92
cd05109	279	PTKc_HER2 Catalytic domain of the Protein Tyrosine	99.92
cd06641	277	STKc_MST3 Catalytic domain of the Protein Serine/T	99.92
cd06606	260	STKc_MAPKKK Catalytic domain of the Protein Serine	99.92
cd05077	262	PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of th	99.92
cd05116	257	PTKc_Syk Catalytic domain of the Protein Tyrosine	99.92
cd08219	255	STKc_Nek3 Catalytic domain of the Protein Serine/T	99.92
cd08530	256	STKc_CNK2-like Catalytic domain of the Protein Ser	99.92
KOG0584	632	consensus Serine/threonine protein kinase [General	99.92
cd05072	261	PTKc_Lyn Catalytic domain of the Protein Tyrosine	99.92
cd05114	256	PTKc_Tec_Rlk Catalytic domain of the Protein Tyros	99.92
cd05070	260	PTKc_Fyn_Yrk Catalytic domain of the Protein Tyros	99.92
cd00192	262	PTKc Catalytic domain of Protein Tyrosine Kinases.	99.92
cd06653	264	STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kina	99.92
cd05090	283	PTKc_Ror1 Catalytic domain of the Protein Tyrosine	99.92
cd05053	293	PTKc_FGFR Catalytic domain of the Protein Tyrosine	99.92
cd05069	260	PTKc_Yes Catalytic domain of the Protein Tyrosine	99.92
cd05113	256	PTKc_Btk_Bmx Catalytic domain of the Protein Tyros	99.92
cd05092	280	PTKc_TrkA Catalytic domain of the Protein Tyrosine	99.91
cd05051	296	PTKc_DDR Catalytic domain of the Protein Tyrosine	99.91
KOG1006	361	consensus Mitogen-activated protein kinase (MAPK)	99.91
KOG1989	738	consensus ARK protein kinase family [Signal transd	99.91
KOG1027	903	consensus Serine/threonine protein kinase and endo	99.91
cd05083	254	PTKc_Chk Catalytic domain of the Protein Tyrosine	99.91
cd05111	279	PTK_HER3 Pseudokinase domain of the Protein Tyrosi	99.91
cd05088	303	PTKc_Tie2 Catalytic domain of the Protein Tyrosine	99.91
cd05060	257	PTKc_Syk_like Catalytic domain of Spleen Tyrosine	99.91
cd05055	302	PTKc_PDGFR Catalytic domain of the Protein Tyrosin	99.91
cd05040	257	PTKc_Ack_like Catalytic domain of the Protein Tyro	99.91
cd05045	290	PTKc_RET Catalytic domain of the Protein Tyrosine	99.91
cd05059	256	PTKc_Tec_like Catalytic domain of Tec-like Protein	99.91
cd05039	256	PTKc_Csk_like Catalytic domain of C-terminal Src k	99.91
cd05067	260	PTKc_Lck_Blk Catalytic domain of the Protein Tyros	99.91
cd05613	290	STKc_MSK1_N N-terminal catalytic domain of the Pro	99.91
cd05064	266	PTKc_EphR_A10 Catalytic domain of the Protein Tyro	99.91
cd05032	277	PTKc_InsR_like Catalytic domain of Insulin Recepto	99.91
cd05099	314	PTKc_FGFR4 Catalytic domain of the Protein Tyrosin	99.91
smart00750	176	KIND kinase non-catalytic C-lobe domain. It is an	99.91
cd05071	262	PTKc_Src Catalytic domain of the Protein Tyrosine	99.91
cd05583	288	STKc_MSK_N N-terminal catalytic domain of the Prot	99.91
cd05047	270	PTKc_Tie Catalytic domain of Tie Protein Tyrosine	99.91
cd05101	304	PTKc_FGFR2 Catalytic domain of the Protein Tyrosin	99.91
cd05058	262	PTKc_Met_Ron Catalytic domain of the Protein Tyros	99.91
cd08228	267	STKc_Nek6 Catalytic domain of the Protein Serine/T	99.91
cd05068	261	PTKc_Frk_like Catalytic domain of Fyn-related kina	99.91
cd05115	257	PTKc_Zap-70 Catalytic domain of the Protein Tyrosi	99.91
KOG0608	1034	consensus Warts/lats-like serine threonine kinases	99.91
cd05084	252	PTKc_Fes Catalytic domain of the Protein Tyrosine	99.91
cd05097	295	PTKc_DDR_like Catalytic domain of Discoidin Domain	99.91
cd05033	266	PTKc_EphR Catalytic domain of Ephrin Receptor Prot	99.91
cd05041	251	PTKc_Fes_like Catalytic domain of Fes-like Protein	99.91
cd05610	669	STKc_MASTL Catalytic domain of the Protein Serine/	99.91
cd05098	307	PTKc_FGFR1 Catalytic domain of the Protein Tyrosin	99.91
cd05148	261	PTKc_Srm_Brk Catalytic domain of the Protein Tyros	99.91
cd05112	256	PTKc_Itk Catalytic domain of the Protein Tyrosine	99.91
cd05100	334	PTKc_FGFR3 Catalytic domain of the Protein Tyrosin	99.91
cd05050	288	PTKc_Musk Catalytic domain of the Protein Tyrosine	99.91
KOG0193	678	consensus Serine/threonine protein kinase RAF [Sig	99.91
cd05043	280	PTK_Ryk Pseudokinase domain of Ryk (Receptor relat	99.91
cd05095	296	PTKc_DDR2 Catalytic domain of the Protein Tyrosine	99.91
cd05076	274	PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of th	99.91
cd08229	267	STKc_Nek7 Catalytic domain of the Protein Serine/T	99.9
cd05063	268	PTKc_EphR_A2 Catalytic domain of the Protein Tyros	99.9
cd05034	261	PTKc_Src_like Catalytic domain of Src kinase-like	99.9
cd05044	269	PTKc_c-ros Catalytic domain of the Protein Tyrosin	99.9
cd05110	303	PTKc_HER4 Catalytic domain of the Protein Tyrosine	99.9
cd05056	270	PTKc_FAK Catalytic domain of the Protein Tyrosine	99.9
cd05080	283	PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the	99.9
cd05103	343	PTKc_VEGFR2 Catalytic domain of the Protein Tyrosi	99.9
cd05085	250	PTKc_Fer Catalytic domain of the Protein Tyrosine	99.9
cd05037	259	PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the	99.9
cd05073	260	PTKc_Hck Catalytic domain of the Protein Tyrosine	99.9
smart00219	258	TyrKc Tyrosine kinase, catalytic domain. Phosphotr	99.9
cd05105	400	PTKc_PDGFR_alpha Catalytic domain of the Protein T	99.9
KOG1026	774	consensus Nerve growth factor receptor TRKA and re	99.9
cd05079	284	PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the	99.9
cd05042	269	PTKc_Aatyk Catalytic domain of the Protein Tyrosin	99.9
PLN03224	507	probable serine/threonine protein kinase; Provisio	99.9
PRK13184	932	pknD serine/threonine-protein kinase; Reviewed	99.9
cd05074	273	PTKc_Tyro3 Catalytic domain of the Protein Tyrosin	99.9
smart00220	244	S_TKc Serine/Threonine protein kinases, catalytic	99.9
cd08224	267	STKc_Nek6_Nek7 Catalytic domain of the Protein Ser	99.9
KOG0586	596	consensus Serine/threonine protein kinase [General	99.9
cd05087	269	PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein	99.89
cd05107	401	PTKc_PDGFR_beta Catalytic domain of the Protein Ty	99.89
cd05086	268	PTKc_Aatyk2 Catalytic domain of the Protein Tyrosi	99.89
cd05046	275	PTK_CCK4 Pseudokinase domain of the Protein Tyrosi	99.89
cd05057	279	PTKc_EGFR_like Catalytic domain of Epidermal Growt	99.89
cd08528	269	STKc_Nek10 Catalytic domain of the Protein Serine/	99.89
cd05081	284	PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of	99.89
cd05066	267	PTKc_EphR_A Catalytic domain of the Protein Tyrosi	99.89
KOG4257	974	consensus Focal adhesion tyrosine kinase FAK, cont	99.89
KOG0695	593	consensus Serine/threonine protein kinase [Signal	99.89
PF07714	259	Pkinase_Tyr: Protein tyrosine kinase Protein kinas	99.89
KOG1095	1025	consensus Protein tyrosine kinase [Signal transduc	99.89
cd05065	269	PTKc_EphR_B Catalytic domain of the Protein Tyrosi	99.89
cd05038	284	PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the P	99.87
KOG0199	1039	consensus ACK and related non-receptor tyrosine ki	99.87
KOG0194	474	consensus Protein tyrosine kinase [Signal transduc	99.86
KOG0196	996	consensus Tyrosine kinase, EPH (ephrin) receptor f	99.86
KOG1187	361	consensus Serine/threonine protein kinase [Signal	99.86
KOG4278	1157	consensus Protein tyrosine kinase [Signal transduc	99.86
KOG0984	282	consensus Mitogen-activated protein kinase (MAPK)	99.85
KOG0200	609	consensus Fibroblast/platelet-derived growth facto	99.85
KOG1094	807	consensus Discoidin domain receptor DDR1 [Signal t	99.84
KOG0587	953	consensus Traf2- and Nck-interacting kinase and re	99.84
KOG1024	563	consensus Receptor-like protein tyrosine kinase RY	99.84
KOG0590	601	consensus Checkpoint kinase and related serine/thr	99.83
KOG4250	732	consensus TANK binding protein kinase TBK1 [Signal	99.82
KOG3653	534	consensus Transforming growth factor beta/activin	99.81
KOG0606	1205	consensus Microtubule-associated serine/threonine	99.8
KOG1151	775	consensus Tousled-like protein kinase [Signal tran	99.8
PLN00113	968	leucine-rich repeat receptor-like protein kinase;	99.79
KOG1025	1177	consensus Epidermal growth factor receptor EGFR an	99.77
KOG0576	829	consensus Mitogen-activated protein kinase kinase	99.74
KOG1345	378	consensus Serine/threonine kinase [Signal transduc	99.74
KOG2052	513	consensus Activin A type IB receptor, serine/threo	99.73
cd00180	215	PKc Catalytic domain of Protein Kinases. Protein K	99.71
KOG1152	772	consensus Signal transduction serine/threonine kin	99.69
KOG1240	1431	consensus Protein kinase containing WD40 repeats [	99.66
KOG0603	612	consensus Ribosomal protein S6 kinase [Signal tran	99.66
smart00221	225	STYKc Protein kinase; unclassified specificity. Ph	99.61
PF14531	288	Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_	99.6
KOG4158	598	consensus BRPK/PTEN-induced protein kinase [Signal	99.58
KOG1033	516	consensus eIF-2alpha kinase PEK/EIF2AK3 [Translati	99.56
COG0515	384	SPS1 Serine/threonine protein kinase [General func	99.53
KOG1164	322	consensus Casein kinase (serine/threonine/tyrosine	99.3
KOG0590	601	consensus Checkpoint kinase and related serine/thr	99.26
KOG1023	484	consensus Natriuretic peptide receptor, guanylate	99.25
KOG0606	1205	consensus Microtubule-associated serine/threonine	99.22
KOG0195	448	consensus Integrin-linked kinase [Signal transduct	99.18
KOG1163	341	consensus Casein kinase (serine/threonine/tyrosine	99.16
KOG1165	449	consensus Casein kinase (serine/threonine/tyrosine	99.15
PRK12274	218	serine/threonine protein kinase; Provisional	99.14
PRK09188	365	serine/threonine protein kinase; Provisional	99.09
KOG2137	700	consensus Protein kinase [Signal transduction mech	99.02
PRK10359	232	lipopolysaccharide core biosynthesis protein; Prov	98.98
KOG1166	974	consensus Mitotic checkpoint serine/threonine prot	98.98
KOG0601	524	consensus Cyclin-dependent kinase WEE1 [Cell cycle	98.85
cd05147	190	RIO1_euk RIO kinase family; eukaryotic RIO1, catal	98.65
cd05145	190	RIO1_like RIO kinase family; RIO1, RIO3 and simila	98.62
PRK01723	239	3-deoxy-D-manno-octulosonic-acid kinase; Reviewed	98.46
PRK10345	210	hypothetical protein; Provisional	98.44
smart00090	237	RIO RIO-like kinase.	98.32
cd05144	198	RIO2_C RIO kinase family; RIO2, C-terminal catalyt	98.3
PRK14879	211	serine/threonine protein kinase; Provisional	98.25
KOG1266	458	consensus Protein kinase [Signal transduction mech	98.22
TIGR03724	199	arch_bud32 Kae1-associated kinase Bud32. Members o	98.2
cd05119	187	RIO RIO kinase family, catalytic domain. The RIO k	98.17
KOG0601	524	consensus Cyclin-dependent kinase WEE1 [Cell cycle	97.96
COG4248	637	Uncharacterized protein with protein kinase and he	97.95
PRK09605	535	bifunctional UGMP family protein/serine/threonine	97.94
COG3642	204	Mn2+-dependent serine/threonine protein kinase [Si	97.67
cd05146	197	RIO3_euk RIO kinase family; eukaryotic RIO3, catal	97.66
cd05120	155	APH_ChoK_like Aminoglycoside 3'-phosphotransferase	97.54
cd05151	170	ChoK Choline Kinase (ChoK). The ChoK subfamily is	97.49
TIGR01982	437	UbiB 2-polyprenylphenol 6-hydroxylase. This model	97.43
KOG3087	229	consensus Serine/threonine protein kinase [General	97.24
PF01163	188	RIO1: RIO1 family; InterPro: IPR018934 Protein pho	97.14
PF06293	206	Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family;	97.09
KOG1243	690	consensus Protein kinase [General function predict	97.07
PRK15123	268	lipopolysaccharide core heptose(I) kinase RfaP; Pr	97.02
PRK04750	537	ubiB putative ubiquinone biosynthesis protein UbiB	96.65
PF06176	229	WaaY: Lipopolysaccharide core biosynthesis protein	96.44
KOG1093	725	consensus Predicted protein kinase (contains TBC a	95.47
KOG0576	829	consensus Mitogen-activated protein kinase kinase	94.87
PRK09902	216	hypothetical protein; Provisional	93.95
KOG1035	1351	consensus eIF-2alpha kinase GCN2 [Translation, rib	93.32
PRK05231	319	homoserine kinase; Provisional	92.52
cd05155	235	APH_ChoK_like_1 Uncharacterized bacterial proteins	92.47
KOG3741	655	consensus Poly(A) ribonuclease subunit [RNA proces	92.24
COG0478	304	RIO-like serine/threonine protein kinase fused to	91.73
PRK12396	409	5-methylribose kinase; Reviewed	90.36
cd05156	302	ChoK_euk Choline Kinase (ChoK) in eukaryotes. The	90.34
cd05153	296	HomoserineK_II Homoserine Kinase, type II. Homoser	90.34
cd05157	235	ETNK_euk Ethanolamine kinase (ETNK) in eukaryotes.	90.05
TIGR00938	307	thrB_alt homoserine kinase, Neisseria type. Homose	89.98
TIGR02172	226	Fb_sc_TIGR02172 Fibrobacter succinogenes paralogou	89.92
PRK10271	188	thiK thiamine kinase; Provisional	89.79
cd05150	244	APH Aminoglycoside 3'-phosphotransferase (APH). Th	89.78
COG1718	268	RIO1 Serine/threonine protein kinase involved in c	88.7
smart00587	196	CHK ZnF_C4 abd HLH domain containing kinases domai	88.14
PF01636	239	APH: Phosphotransferase enzyme family This family	88.08
COG3173	321	Predicted aminoglycoside phosphotransferase [Gener	87.89
TIGR02721	256	ycfN_thiK thiamine kinase. Members of this family	87.86
cd05152	276	MPH2' Macrolide 2'-Phosphotransferase (MPH2'). MPH	87.47
TIGR02906	313	spore_CotS spore coat protein, CotS family. Member	86.48
COG0661	517	AarF Predicted unusual protein kinase [General fun	85.68
COG2334	331	Putative homoserine kinase type II (protein kinase	84.99
COG0510	269	ycfN Thiamine kinase and related kinases [Coenzyme	83.78
KOG1826	2724	consensus Ras GTPase activating protein RasGAP/neu	83.49
PRK09550	401	mtnK methylthioribose kinase; Reviewed	83.15
KOG1235	538	consensus Predicted unusual protein kinase [Genera	83.1
TIGR02904	309	spore_ysxE spore coat protein YsxE. Members of thi	83.04
PLN02236	344	choline kinase	82.5
TIGR01767	370	MTRK 5-methylthioribose kinase. This enzyme is inv	82.03
PHA03111	444	Ser/Thr kinase; Provisional	81.4
PF01633	211	Choline_kinase: Choline/ethanolamine kinase; Inter	81.07
PRK11768	325	serine/threonine protein kinase; Provisional	80.9
cd05610	669	STKc_MASTL Catalytic domain of the Protein Serine/	80.06

>KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms]

Probab=100.00  E-value=4.8e-41  Score=268.69  Aligned_cols=210  Identities=58%  Similarity=0.948  Sum_probs=168.3

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCCCccccCCCcc
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYR   80 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~~~~~~t~~y~   80 (252)
                      |++|||+.+++|.||||+|||+..+.+.+..+.+..       ....+...+..++++|||.|..........+.|..|+
T Consensus       204 sv~fLh~~kl~HTDLKPENILfvss~~~~~~~~k~~-------~~~~r~~ks~~I~vIDFGsAtf~~e~hs~iVsTRHYR  276 (415)
T KOG0671|consen  204 SVAFLHDLKLTHTDLKPENILFVSSEYFKTYNPKKK-------VCFIRPLKSTAIKVIDFGSATFDHEHHSTIVSTRHYR  276 (415)
T ss_pred             HHHHHHhcceeecCCChheEEEeccceEEEeccCCc-------cceeccCCCcceEEEecCCcceeccCcceeeeccccC
Confidence            578999999999999999999988766555443321       1122224466789999999988777777789999999


Q ss_pred             cchhhhcCCCCccchhHhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHHHHHHhhcCCCCCCcccc
Q 025467           81 APEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAA  160 (252)
Q Consensus        81 aPE~l~~~~~~~~~Diws~G~~l~~l~~g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (252)
                      |||++.+.+++.++||||+||||.|+++|...|++.++.++++.|..++|++|...+....  ..+++.++++.|++...
T Consensus       277 APEViLgLGwS~pCDvWSiGCIL~ElytG~~LFqtHen~EHLaMMerIlGp~P~~mi~r~~--~~Kyf~~~rldw~e~~~  354 (415)
T KOG0671|consen  277 APEVILGLGWSQPCDVWSIGCILVELYTGETLFQTHENLEHLAMMERILGPIPSRMIKKTR--KEKYFRRGRLDWPEVSS  354 (415)
T ss_pred             CchheeccCcCCccCceeeeeEEEEeeccceecccCCcHHHHHHHHHhhCCCcHHHhhhhh--hHhhhhcccccCccccc
Confidence            9999999999999999999999999999999999999999999999999999998877665  67778888999998755


Q ss_pred             chhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCCCCCHHHHH
Q 025467          161 SRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREAL  240 (252)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~ta~e~l  240 (252)
                      ..+ ...+.+.+..                             ........+.+..++.|||++||.+||.+|+|+.|+|
T Consensus       355 ~~~-~k~v~~~ckp-----------------------------l~~~~~~~d~e~~~LfDLl~~mL~fDP~~RiTl~EAL  404 (415)
T KOG0671|consen  355 KGK-SKYVFEPCKP-----------------------------LKKYMLQDDLEHVQLFDLLRRMLEFDPARRITLREAL  404 (415)
T ss_pred             ccc-chhhhcCCcc-----------------------------HHHHhccCcHHHhHHHHHHHHHHccCccccccHHHHh
Confidence            433 2222211110                             1222344566677899999999999999999999999


Q ss_pred             cCCCCCCcc
Q 025467          241 RHPFFTRDH  249 (252)
Q Consensus       241 ~hpwf~~~~  249 (252)
                      .||||+...
T Consensus       405 ~HpFF~~~~  413 (415)
T KOG0671|consen  405 SHPFFARLT  413 (415)
T ss_pred             cCHHhhcCC
Confidence            999999764

>KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only]

Probab=100.00  E-value=2.2e-40  Score=281.16  Aligned_cols=206  Identities=34%  Similarity=0.541  Sum_probs=153.1

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCCCccccCCCcc
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYR   80 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~~~~~~t~~y~   80 (252)
                      ||.+||+.||||+||||+|||+...+                         ...+|++|||.+..........+.+..|+
T Consensus       301 ~L~~L~~l~IIHcDLKPENILL~~~~-------------------------r~~vKVIDFGSSc~~~q~vytYiQSRfYR  355 (586)
T KOG0667|consen  301 ALLFLHELGIIHCDLKPENILLKDPK-------------------------RSRIKVIDFGSSCFESQRVYTYIQSRFYR  355 (586)
T ss_pred             HHHHHHhCCeeeccCChhheeeccCC-------------------------cCceeEEecccccccCCcceeeeeccccc
Confidence            68999999999999999999996643                         34689999999988777776778999999


Q ss_pred             cchhhhcCCCCccchhHhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHHHHHHhh-cCCCCCCccc
Q 025467           81 APEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVR-RGRLDWPEGA  159 (252)
Q Consensus        81 aPE~l~~~~~~~~~Diws~G~~l~~l~~g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~-~~~~~~~~~~  159 (252)
                      |||++.+.+|+.+.||||||||++||++|.+.|.|.++.+++..|++++|.+|..+++.+.+....+.+ .+.+......
T Consensus       356 APEVILGlpY~~~IDmWSLGCIlAEL~tG~PLfpG~ne~DQl~~I~e~lG~Pp~~mL~~~~~~~kff~~~~~~~~~~~~~  435 (586)
T KOG0667|consen  356 APEVILGLPYDTAIDMWSLGCILAELFTGEPLFPGDNEYDQLARIIEVLGLPPPKMLDTAKKAHKFFTSLKGFPRLCVET  435 (586)
T ss_pred             cchhhccCCCCCccceeehhhhHHhHhcCccccCCCCHHHHHHHHHHHhCCCCHHHHHhccccceehhccCCceeeeeee
Confidence            999999999999999999999999999999999999999999999999999999999998887666665 3333322111


Q ss_pred             cchhhH--HhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCCCCCHH
Q 025467          160 ASRESI--KSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAR  237 (252)
Q Consensus       160 ~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~ta~  237 (252)
                      ......  ....+           ..........    ...   ..+.............|.|||++||+|||.+|+|+.
T Consensus       436 ~~~~~~k~~~~~~-----------~~~~~~~~~~----~P~---~~~~l~~~~~~~~~~~F~dflk~~L~~dP~~R~tp~  497 (586)
T KOG0667|consen  436 SAPRGTKSPEVRK-----------YYRKARLERR----GPP---GSRSLESGLPKADDKLFIDFLKRCLEWDPAERITPA  497 (586)
T ss_pred             cccccccchhhhh-----------hhhhhccccc----CCC---CCcccchhcccccHHHHHHHHHHHhccCchhcCCHH
Confidence            000000  00000           0000000000    000   001111122235667899999999999999999999


Q ss_pred             HHHcCCCCCCcc
Q 025467          238 EALRHPFFTRDH  249 (252)
Q Consensus       238 e~l~hpwf~~~~  249 (252)
                      |+|+||||++..
T Consensus       498 qal~Hpfl~~~~  509 (586)
T KOG0667|consen  498 QALNHPFLTGTS  509 (586)
T ss_pred             HHhcCccccccc
Confidence            999999999654

>KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=8.8e-39  Score=254.47  Aligned_cols=173  Identities=34%  Similarity=0.592  Sum_probs=137.4

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCC-----CCCcccc
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERP-----DQNYIVS   75 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~-----~~~~~~~   75 (252)
                      ||+|+|+.||+||||||.|+|++.                           +..+|++|||+|+....     ..+..+.
T Consensus       137 gLKyiHSAnViHRDLKPsNll~n~---------------------------~c~lKI~DFGLAR~~~~~~~~~~mTeYVa  189 (359)
T KOG0660|consen  137 GLKYIHSANVIHRDLKPSNLLLNA---------------------------DCDLKICDFGLARYLDKFFEDGFMTEYVA  189 (359)
T ss_pred             hcchhhcccccccccchhheeecc---------------------------CCCEEeccccceeeccccCcccchhccee
Confidence            689999999999999999999954                           44567888888876632     2244678


Q ss_pred             CCCcccchhhhcC-CCCccchhHhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhH-HHHHHhhcCCC
Q 025467           76 TRHYRAPEVILGL-GWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDR-HAEKYVRRGRL  153 (252)
Q Consensus        76 t~~y~aPE~l~~~-~~~~~~Diws~G~~l~~l~~g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~-~~~~~~~~~~~  153 (252)
                      |.+|+|||++... .|+.+.||||+|||++||++|++.|.|.+..+++..|..++|+++++.+..... ....+.+.-. 
T Consensus       190 TRWYRAPElll~~~~Yt~aiDiWSvGCI~AEmL~gkplFpG~d~v~Ql~lI~~~lGtP~~e~l~~i~s~~ar~yi~slp-  268 (359)
T KOG0660|consen  190 TRWYRAPELLLNSSEYTKAIDIWSVGCILAEMLTGKPLFPGKDYVHQLQLILELLGTPSEEDLQKIRSEKARPYIKSLP-  268 (359)
T ss_pred             eeeecCHHHHhccccccchhhhhhhhHHHHHHHcCCCCCCCCchHHHHHHHHHhcCCCCHHHHHHhccHHHHHHHHhCC-
Confidence            9999999998754 699999999999999999999999999999999999999999999888777652 3333333211 


Q ss_pred             CCCccccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCCC
Q 025467          154 DWPEGAASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDR  233 (252)
Q Consensus       154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R  233 (252)
                      ..+.                                               ..........++++.|||.+||++||.+|
T Consensus       269 ~~p~-----------------------------------------------~~f~~~fp~a~p~AidLlekmL~fdP~kR  301 (359)
T KOG0660|consen  269 QIPK-----------------------------------------------QPFSSIFPNANPLAIDLLEKMLVFDPKKR  301 (359)
T ss_pred             CCCC-----------------------------------------------CCHHHHcCCCCHHHHHHHHHHhccCcccc
Confidence            1110                                               00112224567899999999999999999


Q ss_pred             CCHHHHHcCCCCCCc
Q 025467          234 LTAREALRHPFFTRD  248 (252)
Q Consensus       234 ~ta~e~l~hpwf~~~  248 (252)
                      +||+|+|+||||..-
T Consensus       302 ita~eAL~hPYl~~~  316 (359)
T KOG0660|consen  302 ITAEEALAHPYLAPY  316 (359)
T ss_pred             CCHHHHhcChhhhhh
Confidence            999999999999764

>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=1.6e-39  Score=262.21  Aligned_cols=152  Identities=30%  Similarity=0.494  Sum_probs=120.5

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCC--CCccccCCC
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD--QNYIVSTRH   78 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~--~~~~~~t~~   78 (252)
                      |+.|||++||+||||||+|||++.+                        .....+||+|||+|+.....  ....|||+.
T Consensus       288 avkYLH~~GI~HRDiKPeNILl~~~------------------------~e~~llKItDFGlAK~~g~~sfm~TlCGTps  343 (475)
T KOG0615|consen  288 AVKYLHSQGIIHRDIKPENILLSND------------------------AEDCLLKITDFGLAKVSGEGSFMKTLCGTPS  343 (475)
T ss_pred             HHHHHHHcCcccccCCcceEEeccC------------------------CcceEEEecccchhhccccceehhhhcCCcc
Confidence            6899999999999999999999654                        23456899999999987543  345799999


Q ss_pred             cccchhhhcCCC---CccchhHhHHHHHHHHHhCCCCCCCCChHH-HHHHHHHHhCCCchHHHHHhhHHHHHHhhcCCCC
Q 025467           79 YRAPEVILGLGW---TYPCDIWSVGCILVELCTGEALFQTHENLE-HLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLD  154 (252)
Q Consensus        79 y~aPE~l~~~~~---~~~~Diws~G~~l~~l~~g~~pf~~~~~~~-~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~  154 (252)
                      |.|||++.+.++   ..+.||||+||++|.+++|.+||....... ..++                       +..|++.
T Consensus       344 YvAPEVl~~kg~~~~~~kVDiWSlGcvLfvcLsG~pPFS~~~~~~sl~eQ-----------------------I~~G~y~  400 (475)
T KOG0615|consen  344 YVAPEVLASKGVEYYPSKVDIWSLGCVLFVCLSGYPPFSEEYTDPSLKEQ-----------------------ILKGRYA  400 (475)
T ss_pred             ccChhheecCCeecccchheeeeccceEEEEeccCCCcccccCCccHHHH-----------------------HhcCccc
Confidence            999999987653   357899999999999999999998654322 1121                       1222221


Q ss_pred             CCccccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCCCC
Q 025467          155 WPEGAASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRL  234 (252)
Q Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~  234 (252)
                      +-                                                   +..|..+++++.+||.+||++||++||
T Consensus       401 f~---------------------------------------------------p~~w~~Iseea~dlI~~mL~VdP~~R~  429 (475)
T KOG0615|consen  401 FG---------------------------------------------------PLQWDRISEEALDLINWMLVVDPENRP  429 (475)
T ss_pred             cc---------------------------------------------------ChhhhhhhHHHHHHHHHhhEeCcccCc
Confidence            11                                                   234567888999999999999999999


Q ss_pred             CHHHHHcCCCCCCccc
Q 025467          235 TAREALRHPFFTRDHL  250 (252)
Q Consensus       235 ta~e~l~hpwf~~~~~  250 (252)
                      |++|+|+||||++.+.
T Consensus       430 s~~eaL~hpW~~~~~~  445 (475)
T KOG0615|consen  430 SADEALNHPWFKDAPC  445 (475)
T ss_pred             CHHHHhcChhhhcccc
Confidence            9999999999998774

>KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=2.4e-37  Score=253.57  Aligned_cols=174  Identities=33%  Similarity=0.566  Sum_probs=136.0

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCC--CCccccCCC
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD--QNYIVSTRH   78 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~--~~~~~~t~~   78 (252)
                      +|+|+|.+|+.|||+||+|||+.                           ....+||+|||+|+.....  .+.++.|.+
T Consensus       122 GL~hiHk~GfFHRDlKPENiLi~---------------------------~~~~iKiaDFGLARev~SkpPYTeYVSTRW  174 (538)
T KOG0661|consen  122 GLAHIHKHGFFHRDLKPENILIS---------------------------GNDVIKIADFGLAREVRSKPPYTEYVSTRW  174 (538)
T ss_pred             HHHHHHhcCcccccCChhheEec---------------------------ccceeEecccccccccccCCCcchhhhccc
Confidence            58999999999999999999994                           3556899999999865443  344689999


Q ss_pred             cccchhhhcC-CCCccchhHhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHHHHHHhhcCCCCCCc
Q 025467           79 YRAPEVILGL-GWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPE  157 (252)
Q Consensus        79 y~aPE~l~~~-~~~~~~Diws~G~~l~~l~~g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~  157 (252)
                      |+|||++... .|+.+.||||+||+++|+++-++.|.|.++.+++.+|.+++|++.+..+....    .+.+.-.+.+|.
T Consensus       175 YRAPEvLLrs~~Ys~pvD~wA~GcI~aEl~sLrPLFPG~sE~Dqi~KIc~VLGtP~~~~~~eg~----~La~~mnf~~P~  250 (538)
T KOG0661|consen  175 YRAPEVLLRSGYYSSPVDMWAVGCIMAELYSLRPLFPGASEIDQIYKICEVLGTPDKDSWPEGY----NLASAMNFRFPQ  250 (538)
T ss_pred             ccchHHhhhccccCCchHHHHHHHHHHHHHHhcccCCCCcHHHHHHHHHHHhCCCccccchhHH----HHHHHhccCCCc
Confidence            9999998754 58999999999999999999999999999999999999999988765433321    222232333332


Q ss_pred             cccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCCCCCHH
Q 025467          158 GAASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAR  237 (252)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~ta~  237 (252)
                      -..  ..+.                                          ......+.++.+||.+||.|||.+||||+
T Consensus       251 ~~~--~~l~------------------------------------------~L~p~~s~~~~~li~~ll~WDP~kRpTA~  286 (538)
T KOG0661|consen  251 VKP--SPLK------------------------------------------DLLPNASSEAASLIERLLAWDPDKRPTAS  286 (538)
T ss_pred             CCC--CChH------------------------------------------HhCcccCHHHHHHHHHHhcCCCccCccHH
Confidence            110  0111                                          11123567999999999999999999999


Q ss_pred             HHHcCCCCCCcc
Q 025467          238 EALRHPFFTRDH  249 (252)
Q Consensus       238 e~l~hpwf~~~~  249 (252)
                      |+|+||||....
T Consensus       287 ~al~~pffq~~~  298 (538)
T KOG0661|consen  287 QALQHPFFQVGR  298 (538)
T ss_pred             HHhcCccccccc
Confidence            999999998653

>KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only]

Probab=100.00  E-value=1.3e-37  Score=242.61  Aligned_cols=173  Identities=31%  Similarity=0.574  Sum_probs=133.1

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCC---CccccCC
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ---NYIVSTR   77 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~---~~~~~t~   77 (252)
                      |+.|+|+++++||||||+|||++.                           ++.+||||||+|+....+.   +.++.|.
T Consensus       113 ai~~cHk~n~IHRDIKPENILit~---------------------------~gvvKLCDFGFAR~L~~pgd~YTDYVATR  165 (396)
T KOG0593|consen  113 AIHFCHKNNCIHRDIKPENILITQ---------------------------NGVVKLCDFGFARTLSAPGDNYTDYVATR  165 (396)
T ss_pred             HhhhhhhcCeecccCChhheEEec---------------------------CCcEEeccchhhHhhcCCcchhhhhhhhh
Confidence            678999999999999999999955                           4567888888888766332   2357899


Q ss_pred             Ccccchhhhc-CCCCccchhHhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHHHHHHhhcCCCCCC
Q 025467           78 HYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWP  156 (252)
Q Consensus        78 ~y~aPE~l~~-~~~~~~~Diws~G~~l~~l~~g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~  156 (252)
                      +|+|||.+.+ .+|+.+.||||+||++.||++|.+.|.|..+.+++..|...+|+++..-.+-..       +.+.+.. 
T Consensus       166 WYRaPELLvGDtqYG~pVDiWAiGCv~aEl~~G~pL~PG~SDiDQLy~I~ktLG~L~prhq~iF~-------~N~~F~G-  237 (396)
T KOG0593|consen  166 WYRAPELLVGDTQYGKPVDIWAIGCVFAELLTGEPLWPGRSDIDQLYLIRKTLGNLIPRHQSIFS-------SNPFFHG-  237 (396)
T ss_pred             hccChhhhcccCcCCCcccchhhhHHHHHHhcCCcCCCCcchHHHHHHHHHHHcccCHHHHHHhc-------cCCceee-
Confidence            9999999998 589999999999999999999999999999999999999999998765433221       1111110 


Q ss_pred             ccccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCCCCCH
Q 025467          157 EGAASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTA  236 (252)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~ta  236 (252)
                                  ..+|....                           ....+......+..+.||+++||..||++|+|.
T Consensus       238 ------------v~lP~~~~---------------------------~epLe~k~p~~s~~~ld~~k~cL~~dP~~R~sc  278 (396)
T KOG0593|consen  238 ------------VRLPEPEH---------------------------PEPLERKYPKISNVLLDLLKKCLKMDPDDRLSC  278 (396)
T ss_pred             ------------eecCCCCC---------------------------ccchhhhcccchHHHHHHHHHHhcCCccccccH
Confidence                        00011000                           011122234556689999999999999999999


Q ss_pred             HHHHcCCCCCC
Q 025467          237 REALRHPFFTR  247 (252)
Q Consensus       237 ~e~l~hpwf~~  247 (252)
                      +|+|.||||.+
T Consensus       279 ~qll~H~yFd~  289 (396)
T KOG0593|consen  279 EQLLHHPYFDG  289 (396)
T ss_pred             HHHhcChHHHH
Confidence            99999999954

>KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]

Probab=100.00  E-value=5e-37  Score=233.06  Aligned_cols=151  Identities=30%  Similarity=0.477  Sum_probs=126.0

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCCC--ccccCCC
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQN--YIVSTRH   78 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~~--~~~~t~~   78 (252)
                      ||.|+|.+||||||+||+|+|+..+                        .....+||+|||+|........  ..+||+.
T Consensus       122 al~yCH~n~IvHRDvkP~nllLASK------------------------~~~A~vKL~~FGvAi~l~~g~~~~G~~GtP~  177 (355)
T KOG0033|consen  122 ALAYCHSNGIVHRDLKPENLLLASK------------------------AKGAAVKLADFGLAIEVNDGEAWHGFAGTPG  177 (355)
T ss_pred             HHHHHHhcCceeccCChhheeeeec------------------------cCCCceeecccceEEEeCCccccccccCCCc
Confidence            6899999999999999999999654                        3455689999999977664332  2589999


Q ss_pred             cccchhhhcCCCCccchhHhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHHHHHHhhcCCCCCCcc
Q 025467           79 YRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEG  158 (252)
Q Consensus        79 y~aPE~l~~~~~~~~~Diws~G~~l~~l~~g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~  158 (252)
                      |+|||++...+|+.++|||+.||++|-++.|++||.+.+.....++|...--..                       +  
T Consensus       178 fmaPEvvrkdpy~kpvDiW~cGViLfiLL~G~~PF~~~~~~rlye~I~~g~yd~-----------------------~--  232 (355)
T KOG0033|consen  178 YLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYEQIKAGAYDY-----------------------P--  232 (355)
T ss_pred             ccCHHHhhcCCCCCcchhhhhhHHHHHHHhCCCCCCCccHHHHHHHHhccccCC-----------------------C--
Confidence            999999999999999999999999999999999999877777777665432211                       1  


Q ss_pred             ccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCCCCCHHH
Q 025467          159 AASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTARE  238 (252)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~ta~e  238 (252)
                                                                       ...|+.+++++++|+++||..||.||+||.|
T Consensus       233 -------------------------------------------------~~~w~~is~~Ak~LvrrML~~dP~kRIta~E  263 (355)
T KOG0033|consen  233 -------------------------------------------------SPEWDTVTPEAKSLIRRMLTVNPKKRITADE  263 (355)
T ss_pred             -------------------------------------------------CcccCcCCHHHHHHHHHHhccChhhhccHHH
Confidence                                                             1235678889999999999999999999999


Q ss_pred             HHcCCCCCCcc
Q 025467          239 ALRHPFFTRDH  249 (252)
Q Consensus       239 ~l~hpwf~~~~  249 (252)
                      +|+|||+.+..
T Consensus       264 AL~HpWi~~r~  274 (355)
T KOG0033|consen  264 ALKHPWICNRE  274 (355)
T ss_pred             HhCCchhcchH
Confidence            99999998753

>KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair]

Probab=100.00  E-value=1.1e-36  Score=233.27  Aligned_cols=173  Identities=31%  Similarity=0.567  Sum_probs=133.2

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCCC---ccccCC
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQN---YIVSTR   77 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~~---~~~~t~   77 (252)
                      +|+|||++.|+||||||.|+|++.                           ++.+|++|||+|+.......   +.+-|.
T Consensus       113 Gl~y~H~~~IlHRDlKPnNLLis~---------------------------~g~lKiADFGLAr~f~~p~~~~~~~V~TR  165 (318)
T KOG0659|consen  113 GLAYCHSKWILHRDLKPNNLLISS---------------------------DGQLKIADFGLARFFGSPNRIQTHQVVTR  165 (318)
T ss_pred             HHHHHHhhhhhcccCCccceEEcC---------------------------CCcEEeecccchhccCCCCcccccceeee
Confidence            589999999999999999999955                           44677788888776554332   236789


Q ss_pred             CcccchhhhcC-CCCccchhHhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHHHHHHhhcCCCCCC
Q 025467           78 HYRAPEVILGL-GWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWP  156 (252)
Q Consensus        78 ~y~aPE~l~~~-~~~~~~Diws~G~~l~~l~~g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~  156 (252)
                      +|+|||.+.|. .|+...||||+||++.||+.|.+.|.|.++.+++..+.+.+|++-++.|..+...-.+..-.      
T Consensus       166 WYRAPELLfGsr~Yg~~VDmWavGCI~AELllr~P~fpG~sDidQL~~If~~LGTP~~~~WP~~~~lpdY~~~~------  239 (318)
T KOG0659|consen  166 WYRAPELLFGSRQYGTGVDMWAVGCIFAELLLRVPFFPGDSDIDQLSKIFRALGTPTPDQWPEMTSLPDYVKIQ------  239 (318)
T ss_pred             eccChHHhccchhcCCcchhhhHHHHHHHHHccCCCCCCCchHHHHHHHHHHcCCCCcccCccccccccHHHHh------
Confidence            99999999987 69999999999999999999999999999999999999999988765544443211111100      


Q ss_pred             ccccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCCCCCH
Q 025467          157 EGAASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTA  236 (252)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~ta  236 (252)
                                   ..|.   +..                            .......+.++.|||.+||.+||.+|+||
T Consensus       240 -------------~~P~---~~~----------------------------~~lf~aas~d~ldLl~~m~~ynP~~Rita  275 (318)
T KOG0659|consen  240 -------------QFPK---PPL----------------------------NNLFPAASSDALDLLSKMLTYNPKKRITA  275 (318)
T ss_pred             -------------cCCC---Ccc----------------------------ccccccccHHHHHHHHhhhccCchhcccH
Confidence                         0000   000                            00123455678999999999999999999


Q ss_pred             HHHHcCCCCCCccc
Q 025467          237 REALRHPFFTRDHL  250 (252)
Q Consensus       237 ~e~l~hpwf~~~~~  250 (252)
                      .|+|+|+||+..|.
T Consensus       276 ~qaL~~~yf~~~P~  289 (318)
T KOG0659|consen  276 SQALKHPYFKSLPL  289 (318)
T ss_pred             HHHhcchhhhcCCC
Confidence            99999999998664

>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]

Probab=100.00  E-value=1.8e-36  Score=251.97  Aligned_cols=160  Identities=28%  Similarity=0.448  Sum_probs=119.1

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCCCccccCCCcc
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYR   80 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~~~~~~t~~y~   80 (252)
                      ||+|||++|||||||||+|||++.++..+|+|||.|...........           .+.............+||..|.
T Consensus       186 AleylH~~GIIHRDlKPENILLd~dmhikITDFGsAK~l~~~~~~~~-----------~~~~~~~a~s~~~SFVGTAeYV  254 (604)
T KOG0592|consen  186 ALEYLHSNGIIHRDLKPENILLDKDGHIKITDFGSAKILSPSQKSQE-----------NPVDPNQASSRRSSFVGTAEYV  254 (604)
T ss_pred             HHHHHHhcCceeccCChhheeEcCCCcEEEeeccccccCChhhcccc-----------CccCcccccCcccceeeeeccc
Confidence            68999999999999999999996555544444444433221111000           0000000000012358999999


Q ss_pred             cchhhhcCCCCccchhHhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHHHHHHhhcCCCCCCcccc
Q 025467           81 APEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAA  160 (252)
Q Consensus        81 aPE~l~~~~~~~~~Diws~G~~l~~l~~g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (252)
                      +||++.....+..+|+|+|||++|+|+.|.+||.+.++.-.+++|..+.=..|                       +   
T Consensus       255 SPElL~~~~~~~~sDiWAlGCilyQmlaG~PPFra~NeyliFqkI~~l~y~fp-----------------------~---  308 (604)
T KOG0592|consen  255 SPELLNDSPAGPSSDLWALGCILYQMLAGQPPFRAANEYLIFQKIQALDYEFP-----------------------E---  308 (604)
T ss_pred             CHHHhcCCCCCcccchHHHHHHHHHHhcCCCCCccccHHHHHHHHHHhcccCC-----------------------C---
Confidence            99999999999999999999999999999999999999888888777543332                       2   


Q ss_pred             chhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCCCCCHHHHH
Q 025467          161 SRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREAL  240 (252)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~ta~e~l  240 (252)
                                                                          ..++.++||++++|+.||.+|+|+.||.
T Consensus       309 ----------------------------------------------------~fp~~a~dLv~KLLv~dp~~Rlt~~qIk  336 (604)
T KOG0592|consen  309 ----------------------------------------------------GFPEDARDLIKKLLVRDPSDRLTSQQIK  336 (604)
T ss_pred             ----------------------------------------------------CCCHHHHHHHHHHHccCccccccHHHHh
Confidence                                                                2346899999999999999999999999


Q ss_pred             cCCCCCCcc
Q 025467          241 RHPFFTRDH  249 (252)
Q Consensus       241 ~hpwf~~~~  249 (252)
                      +||||....
T Consensus       337 ~HpFF~~Vd  345 (604)
T KOG0592|consen  337 AHPFFEGVD  345 (604)
T ss_pred             hCcccccCC
Confidence            999999764

>KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism]

Probab=100.00  E-value=1.8e-36  Score=241.76  Aligned_cols=173  Identities=33%  Similarity=0.613  Sum_probs=138.3

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCCC--ccccCCC
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQN--YIVSTRH   78 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~~--~~~~t~~   78 (252)
                      ||+|||+.||+||||||.|+|++                          ..++.+||||||.|+.......  ....|..
T Consensus       137 gl~yLh~~~IcHRDIKPqNlLvD--------------------------~~tg~LKicDFGSAK~L~~~epniSYicSRy  190 (364)
T KOG0658|consen  137 GLAYLHSHGICHRDIKPQNLLVD--------------------------PDTGVLKICDFGSAKVLVKGEPNISYICSRY  190 (364)
T ss_pred             HHHHHHhcCcccCCCChheEEEc--------------------------CCCCeEEeccCCcceeeccCCCceeEEEecc
Confidence            68999999999999999999995                          3457899999999987655443  3467899


Q ss_pred             cccchhhhcC-CCCccchhHhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHHHHHHhhcCCCCCCc
Q 025467           79 YRAPEVILGL-GWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPE  157 (252)
Q Consensus        79 y~aPE~l~~~-~~~~~~Diws~G~~l~~l~~g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~  157 (252)
                      |+|||.+.+. .|+.+.||||.||++.||+-|++.|.|.+..+++..|.+++|.+..+.+..+.....      ...+|.
T Consensus       191 YRaPELifga~~Yt~~IDiWSaGCV~aELl~g~plFpG~s~~dQL~eIik~lG~Pt~e~I~~mn~~y~------~~~~p~  264 (364)
T KOG0658|consen  191 YRAPELIFGATEYTTSIDIWSAGCVMAELLKGQPLFPGDSSVDQLVEIIKVLGTPTREDIKSMNPNYT------EFKFPQ  264 (364)
T ss_pred             ccCHHHHcCccccCceeEEhhhhHHHHHHhcCCcccCCCCHHHHHHHHHHHhCCCCHHHHhhcCcccc------cccCcc
Confidence            9999999987 589999999999999999999999999999999999999999999887766542211      111111


Q ss_pred             cccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCCCCCHH
Q 025467          158 GAASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAR  237 (252)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~ta~  237 (252)
                                      +.....                           ..-.....+++..+|+.++|+++|.+|.||.
T Consensus       265 ----------------ik~~~~---------------------------~~~~~~~~~~d~~dll~~~L~Y~P~~R~~~~  301 (364)
T KOG0658|consen  265 ----------------IKAHPW---------------------------HKVFFKRLPPDALDLLSKLLQYSPSKRLSAL  301 (364)
T ss_pred             ----------------cccccc---------------------------eeecccCCCHHHHHHHHHHhccChhhcCCHH
Confidence                            000000                           0001245678999999999999999999999


Q ss_pred             HHHcCCCCCCc
Q 025467          238 EALRHPFFTRD  248 (252)
Q Consensus       238 e~l~hpwf~~~  248 (252)
                      |++.||||+..
T Consensus       302 ~~l~h~fFdel  312 (364)
T KOG0658|consen  302 EALAHPFFDEL  312 (364)
T ss_pred             HHhcchhhHHh
Confidence            99999999864

>KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only]

Probab=100.00  E-value=1.8e-36  Score=238.92  Aligned_cols=177  Identities=29%  Similarity=0.511  Sum_probs=135.1

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCC---CCccccCC
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD---QNYIVSTR   77 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~---~~~~~~t~   77 (252)
                      ||+|||.+.|+|||||++|+|++.                           .+.+||+|||+|+....+   .+..+-|.
T Consensus       189 glk~lH~~wilHRDLK~SNLLm~~---------------------------~G~lKiaDFGLAR~ygsp~k~~T~lVVTL  241 (419)
T KOG0663|consen  189 GLKHLHDNWILHRDLKTSNLLLSH---------------------------KGILKIADFGLAREYGSPLKPYTPLVVTL  241 (419)
T ss_pred             HHHHHhhceeEecccchhheeecc---------------------------CCcEEecccchhhhhcCCcccCcceEEEe
Confidence            689999999999999999999954                           456788888888765554   34457799


Q ss_pred             CcccchhhhcC-CCCccchhHhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHHHHHHhhcCCCCCC
Q 025467           78 HYRAPEVILGL-GWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWP  156 (252)
Q Consensus        78 ~y~aPE~l~~~-~~~~~~Diws~G~~l~~l~~g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~  156 (252)
                      +|+|||++.+. .|+.+.||||+|||+.+++++.+.|.|..+.+++.+|...+|++.+..+.........  +  ...++
T Consensus       242 WYRaPELLLG~~tyst~iDMWSvGCI~aE~l~~kPlf~G~sE~dQl~~If~llGtPte~iwpg~~~lp~~--k--~~~f~  317 (419)
T KOG0663|consen  242 WYRAPELLLGAKTYSTAVDMWSVGCIFAELLTQKPLFPGKSEIDQLDKIFKLLGTPSEAIWPGYSELPAV--K--KMTFS  317 (419)
T ss_pred             eecCHHHhcCCcccCcchhhhhHHHHHHHHHhcCCCCCCCchHHHHHHHHHHhCCCccccCCCccccchh--h--ccccC
Confidence            99999999987 5999999999999999999999999999999999999999999987665443221100  0  00000


Q ss_pred             ccccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCCCCCH
Q 025467          157 EGAASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTA  236 (252)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~ta  236 (252)
                      +.                                       .++.+.....   ....++...+||.++|.+||.+|.||
T Consensus       318 ~~---------------------------------------pyn~lr~kF~---~~~lse~g~~Lln~llt~dP~kR~tA  355 (419)
T KOG0663|consen  318 EH---------------------------------------PYNNLRKKFG---ALSLSEQGFDLLNKLLTYDPGKRITA  355 (419)
T ss_pred             CC---------------------------------------Cchhhhhhcc---ccccchhHHHHHHHHhccCccccccH
Confidence            00                                       0001100100   01156789999999999999999999


Q ss_pred             HHHHcCCCCCCccc
Q 025467          237 REALRHPFFTRDHL  250 (252)
Q Consensus       237 ~e~l~hpwf~~~~~  250 (252)
                      +|+|+|+||...|.
T Consensus       356 ~~~L~h~~F~e~P~  369 (419)
T KOG0663|consen  356 EDGLKHEYFRETPL  369 (419)
T ss_pred             HHhhcccccccCCC
Confidence            99999999998664

>KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only]

Probab=100.00  E-value=5.5e-36  Score=238.78  Aligned_cols=175  Identities=34%  Similarity=0.582  Sum_probs=133.5

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCC---CccccCC
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ---NYIVSTR   77 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~---~~~~~t~   77 (252)
                      ||+|||+++|+||||||.|||++                           ..+.+||+|||+|+....+.   +..++|.
T Consensus       132 gl~~~H~~~IlHRDLKPQNlLi~---------------------------~~G~lKlaDFGlAra~~ip~~~yt~evvTl  184 (323)
T KOG0594|consen  132 GLAFLHSHGILHRDLKPQNLLIS---------------------------SSGVLKLADFGLARAFSIPMRTYTPEVVTL  184 (323)
T ss_pred             HHHHHHhCCeecccCCcceEEEC---------------------------CCCcEeeeccchHHHhcCCcccccccEEEe
Confidence            68999999999999999999994                           45567888888887544332   3357899


Q ss_pred             CcccchhhhcC-CCCccchhHhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHHHHHHhhcCCCCCC
Q 025467           78 HYRAPEVILGL-GWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWP  156 (252)
Q Consensus        78 ~y~aPE~l~~~-~~~~~~Diws~G~~l~~l~~g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~  156 (252)
                      +|+|||++.+. .|++..||||+|||+++|+++++.|.+..+.+++..|.+++|++.++.|..+..              
T Consensus       185 WYRaPEvLlGs~~Ys~~vDiWs~GcIfaEm~~~~~LFpG~se~~ql~~If~~lGtP~e~~Wp~v~~--------------  250 (323)
T KOG0594|consen  185 WYRAPEVLLGSTSYSTSVDIWSLGCIFAEMFTRRPLFPGDSEIDQLFRIFRLLGTPNEKDWPGVSS--------------  250 (323)
T ss_pred             eccCHHHhcCCCcCCCCcchHhHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHcCCCCccCCCCccc--------------
Confidence            99999999987 689999999999999999999999999999999999999999987644333221              


Q ss_pred             ccccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCCCCCH
Q 025467          157 EGAASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTA  236 (252)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~ta  236 (252)
                                    .++...+     +..+..               ...........+.+..+++.+||+++|.+|.||
T Consensus       251 --------------~~~~k~~-----f~~~~~---------------~~~l~~~~~~~~~~~~dll~~~L~y~p~~R~Sa  296 (323)
T KOG0594|consen  251 --------------LPDYKAP-----FPKWPG---------------PKDLSSILPKLDPDGIELLSKLLQYDPAKRISA  296 (323)
T ss_pred             --------------ccccccc-----CcCCCC---------------ccchHHhccccCccHHHHHHHHhccCcccCcCH
Confidence                          1111110     000000               001111123334689999999999999999999


Q ss_pred             HHHHcCCCCCCccc
Q 025467          237 REALRHPFFTRDHL  250 (252)
Q Consensus       237 ~e~l~hpwf~~~~~  250 (252)
                      +.+|.||||...+.
T Consensus       297 ~~al~h~yf~~~~~  310 (323)
T KOG0594|consen  297 KGALTHPYFSELPE  310 (323)
T ss_pred             HHHhcChhhccccc
Confidence            99999999998754

>KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]

Probab=100.00  E-value=5.5e-36  Score=239.40  Aligned_cols=150  Identities=29%  Similarity=0.514  Sum_probs=117.5

Q ss_pred             Chhhhhc-cCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCC-CccccCCC
Q 025467            1 MFAVMHD-LCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ-NYIVSTRH   78 (252)
Q Consensus         1 aL~~lH~-~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~-~~~~~t~~   78 (252)
                      ||.|||. ++||||||||+|||++                           .++.+||||||.+....... ...+||..
T Consensus       190 GL~YLh~~~~IIHRDIKPsNlLvN---------------------------skGeVKicDFGVS~~lvnS~a~tfvGT~~  242 (364)
T KOG0581|consen  190 GLSYLHEERKIIHRDIKPSNLLVN---------------------------SKGEVKICDFGVSGILVNSIANTFVGTSA  242 (364)
T ss_pred             HHHHHhhccCeeeccCCHHHeeec---------------------------cCCCEEeccccccHHhhhhhccccccccc
Confidence            6899995 9999999999999994                           45568888888876544432 34589999


Q ss_pred             cccchhhhcCCCCccchhHhHHHHHHHHHhCCCCCCCC--ChHHHHHHHHHHhCCCchHHHHHhhHHHHHHhhcCCCCCC
Q 025467           79 YRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTH--ENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWP  156 (252)
Q Consensus        79 y~aPE~l~~~~~~~~~Diws~G~~l~~l~~g~~pf~~~--~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~  156 (252)
                      |||||.+.+..|+.++||||||++++|+++|+.||...  .....+..+..+...+|.                   ..|
T Consensus       243 YMsPERi~g~~Ys~~sDIWSLGLsllE~a~GrfP~~~~~~~~~~~~~Ll~~Iv~~ppP-------------------~lP  303 (364)
T KOG0581|consen  243 YMSPERISGESYSVKSDIWSLGLSLLELAIGRFPYPPPNPPYLDIFELLCAIVDEPPP-------------------RLP  303 (364)
T ss_pred             ccChhhhcCCcCCcccceecccHHHHHHhhCCCCCCCcCCCCCCHHHHHHHHhcCCCC-------------------CCC
Confidence            99999999999999999999999999999999999764  122334444444332221                   111


Q ss_pred             ccccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCCCCCH
Q 025467          157 EGAASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTA  236 (252)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~ta  236 (252)
                      +                                                      ...+++|.+|+..||+.||.+|+|+
T Consensus       304 ~------------------------------------------------------~~fS~ef~~FV~~CL~Kdp~~R~s~  329 (364)
T KOG0581|consen  304 E------------------------------------------------------GEFSPEFRSFVSCCLRKDPSERPSA  329 (364)
T ss_pred             c------------------------------------------------------ccCCHHHHHHHHHHhcCCcccCCCH
Confidence            1                                                      1356799999999999999999999


Q ss_pred             HHHHcCCCCCCccc
Q 025467          237 REALRHPFFTRDHL  250 (252)
Q Consensus       237 ~e~l~hpwf~~~~~  250 (252)
                      .|+++|||+++...
T Consensus       330 ~qLl~Hpfi~~~~~  343 (364)
T KOG0581|consen  330 KQLLQHPFIKKFED  343 (364)
T ss_pred             HHHhcCHHHhhccc
Confidence            99999999986543

>KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=1.8e-35  Score=249.29  Aligned_cols=143  Identities=33%  Similarity=0.572  Sum_probs=119.3

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCC---CCccccCC
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD---QNYIVSTR   77 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~---~~~~~~t~   77 (252)
                      ||.|||+++|+|||||..|+++                           +.+..+||+|||+|......   ....+||+
T Consensus       130 GlkYLH~~~IiHRDLKLGNlfL---------------------------~~~~~VKIgDFGLAt~le~~~Erk~TlCGTP  182 (592)
T KOG0575|consen  130 GLKYLHSLGIIHRDLKLGNLFL---------------------------NENMNVKIGDFGLATQLEYDGERKKTLCGTP  182 (592)
T ss_pred             HHHHHHhcCceecccchhheee---------------------------cCcCcEEecccceeeeecCcccccceecCCC
Confidence            6899999999999999999999                           56667899999999876533   34579999


Q ss_pred             CcccchhhhcCCCCccchhHhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHHHHHHhhcCCCCCCc
Q 025467           78 HYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPE  157 (252)
Q Consensus        78 ~y~aPE~l~~~~~~~~~Diws~G~~l~~l~~g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~  157 (252)
                      .|.|||++...+.+..+||||+||++|.|+.|++||...+-.+.+..|....=.+                       | 
T Consensus       183 NYIAPEVl~k~gHsfEvDiWSlGcvmYtLL~G~PPFetk~vkety~~Ik~~~Y~~-----------------------P-  238 (592)
T KOG0575|consen  183 NYIAPEVLNKSGHSFEVDIWSLGCVMYTLLVGRPPFETKTVKETYNKIKLNEYSM-----------------------P-  238 (592)
T ss_pred             cccChhHhccCCCCCchhhhhhhhHHHhhhhCCCCcccchHHHHHHHHHhcCccc-----------------------c-
Confidence            9999999999899999999999999999999999998766555555443322111                       1 


Q ss_pred             cccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCCCCCHH
Q 025467          158 GAASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAR  237 (252)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~ta~  237 (252)
                                                                            ...+.++.+||.+||+.||.+|||++
T Consensus       239 ------------------------------------------------------~~ls~~A~dLI~~lL~~~P~~Rpsl~  264 (592)
T KOG0575|consen  239 ------------------------------------------------------SHLSAEAKDLIRKLLRPNPSERPSLD  264 (592)
T ss_pred             ------------------------------------------------------cccCHHHHHHHHHHhcCCcccCCCHH
Confidence                                                                  23456999999999999999999999


Q ss_pred             HHHcCCCCCCc
Q 025467          238 EALRHPFFTRD  248 (252)
Q Consensus       238 e~l~hpwf~~~  248 (252)
                      ++|.|+||++.
T Consensus       265 ~vL~h~Ff~~g  275 (592)
T KOG0575|consen  265 EVLDHPFFKSG  275 (592)
T ss_pred             HHhcCHhhhCC
Confidence            99999999654

>KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=4e-35  Score=242.15  Aligned_cols=174  Identities=29%  Similarity=0.502  Sum_probs=134.6

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCC----CCccccC
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD----QNYIVST   76 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~----~~~~~~t   76 (252)
                      ||+|||++||+|||||.+|||+                           +.++.+||+|||+|+.....    .+..+-|
T Consensus       230 Gl~~cH~~gvlHRDIK~SNiLi---------------------------dn~G~LKiaDFGLAr~y~~~~~~~~T~rVvT  282 (560)
T KOG0600|consen  230 GLEYCHSRGVLHRDIKGSNILI---------------------------DNNGVLKIADFGLARFYTPSGSAPYTSRVVT  282 (560)
T ss_pred             HHHHHhhcCeeeccccccceEE---------------------------cCCCCEEeccccceeeccCCCCcccccceEE
Confidence            5899999999999999999999                           55667788888888743322    2335779


Q ss_pred             CCcccchhhhcC-CCCccchhHhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHHHHHHhhcCCCCC
Q 025467           77 RHYRAPEVILGL-GWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDW  155 (252)
Q Consensus        77 ~~y~aPE~l~~~-~~~~~~Diws~G~~l~~l~~g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~  155 (252)
                      ++|+|||+++|. .|+.+.|+||+|||+.||+.|++.|.+.++.+++..|.++.|.+.+..|. ..+          +.+
T Consensus       283 LWYRpPELLLG~t~Yg~aVDlWS~GCIl~El~~gkPI~~G~tEveQl~kIfklcGSP~e~~W~-~~k----------LP~  351 (560)
T KOG0600|consen  283 LWYRPPELLLGATSYGTAVDLWSVGCILAELFLGKPILQGRTEVEQLHKIFKLCGSPTEDYWP-VSK----------LPH  351 (560)
T ss_pred             eeccChHHhcCCcccccceeehhhhHHHHHHHcCCCCcCCccHHHHHHHHHHHhCCCChhccc-ccc----------CCc
Confidence            999999999987 69999999999999999999999999999999999999999999887754 111          111


Q ss_pred             CccccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCCCCC
Q 025467          156 PEGAASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLT  235 (252)
Q Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~t  235 (252)
                      .........                                  +    .....+.....+..+.+|+..||.+||.+|.|
T Consensus       352 ~~~~kp~~~----------------------------------y----~r~l~E~~~~~~~~~l~Ll~~lL~ldP~kR~t  393 (560)
T KOG0600|consen  352 ATIFKPQQP----------------------------------Y----KRRLRETFKDFPASALDLLEKLLSLDPDKRGT  393 (560)
T ss_pred             ccccCCCCc----------------------------------c----cchHHHHhccCCHHHHHHHHHHhccCcccccc
Confidence            000000000                                  0    01111123456778999999999999999999


Q ss_pred             HHHHHcCCCCCCccc
Q 025467          236 AREALRHPFFTRDHL  250 (252)
Q Consensus       236 a~e~l~hpwf~~~~~  250 (252)
                      |+++|+|+||+..+.
T Consensus       394 A~~aL~seyF~t~p~  408 (560)
T KOG0600|consen  394 ASSALQSEYFTTEPL  408 (560)
T ss_pred             HHHHhcCcccccCCC
Confidence            999999999976654

>PTZ00284 protein kinase; Provisional

Probab=100.00  E-value=1.7e-34  Score=251.05  Aligned_cols=199  Identities=38%  Similarity=0.655  Sum_probs=137.7

Q ss_pred             Chhhhhc-cCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCCCccccCCCc
Q 025467            1 MFAVMHD-LCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHY   79 (252)
Q Consensus         1 aL~~lH~-~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~~~~~~t~~y   79 (252)
                      ||+|||+ .|||||||||+|||+...+....  ......         .......+||+|||.+..........+||+.|
T Consensus       243 aL~yLH~~~gIiHrDlKP~NILl~~~~~~~~--~~~~~~---------~~~~~~~vkl~DfG~~~~~~~~~~~~~gt~~Y  311 (467)
T PTZ00284        243 ALDYFHTELHLMHTDLKPENILMETSDTVVD--PVTNRA---------LPPDPCRVRICDLGGCCDERHSRTAIVSTRHY  311 (467)
T ss_pred             HHHHHHhcCCeecCCCCHHHEEEecCCcccc--cccccc---------cCCCCceEEECCCCccccCccccccccCCccc
Confidence            6899998 59999999999999976542111  110000         00223468999999886554444556899999


Q ss_pred             ccchhhhcCCCCccchhHhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHH--HHHHhhcCCCCCCc
Q 025467           80 RAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRH--AEKYVRRGRLDWPE  157 (252)
Q Consensus        80 ~aPE~l~~~~~~~~~Diws~G~~l~~l~~g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~--~~~~~~~~~~~~~~  157 (252)
                      +|||++.+..|+.++||||+||++|+|++|+.||.+.+..+.+..+...+|.+|..|...+...  ...+...+.+... 
T Consensus       312 ~APE~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~-  390 (467)
T PTZ00284        312 RSPEVVLGLGWMYSTDMWSMGCIIYELYTGKLLYDTHDNLEHLHLMEKTLGRLPSEWAGRCGTEEARLLYNSAGQLRPC-  390 (467)
T ss_pred             cCcHHhhcCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCHHHHhhccchhHHHHhhhccccccc-
Confidence            9999999999999999999999999999999999998888999999999999998876543211  1111111111000 


Q ss_pred             cccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCCCCCHH
Q 025467          158 GAASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAR  237 (252)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~ta~  237 (252)
                        .....+......                                 .  ..........+.|||.+||++||.+||||+
T Consensus       391 --~~~~~~~~~~~~---------------------------------~--~~~~~~~~~~~~dli~~mL~~dP~~R~ta~  433 (467)
T PTZ00284        391 --TDPKHLARIARA---------------------------------R--PVREVIRDDLLCDLIYGLLHYDRQKRLNAR  433 (467)
T ss_pred             --CCHHHHHhhhcc---------------------------------c--chhhhhchHHHHHHHHHhCCcChhhCCCHH
Confidence              000000000000                                 0  000011246789999999999999999999


Q ss_pred             HHHcCCCCCCc
Q 025467          238 EALRHPFFTRD  248 (252)
Q Consensus       238 e~l~hpwf~~~  248 (252)
                      |+|+||||.+.
T Consensus       434 e~L~Hp~~~~~  444 (467)
T PTZ00284        434 QMTTHPYVLKY  444 (467)
T ss_pred             HHhcCcccccc
Confidence            99999999874

>KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms]

Probab=100.00  E-value=1.6e-34  Score=230.88  Aligned_cols=144  Identities=35%  Similarity=0.557  Sum_probs=118.3

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCC---CCCccccCC
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERP---DQNYIVSTR   77 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~---~~~~~~~t~   77 (252)
                      ||.|||++|||||||||+|||+                           +..++++|+|||+++....   .....+||+
T Consensus       137 AL~~LH~~gIiyRDlKPENILL---------------------------d~~GHi~LtDFgL~k~~~~~~~~t~tfcGT~  189 (357)
T KOG0598|consen  137 ALGYLHSKGIIYRDLKPENILL---------------------------DEQGHIKLTDFGLCKEDLKDGDATRTFCGTP  189 (357)
T ss_pred             HHHHHHhCCeeeccCCHHHeee---------------------------cCCCcEEEeccccchhcccCCCccccccCCc
Confidence            7999999999999999999999                           5677888999998875333   233469999


Q ss_pred             CcccchhhhcCCCCccchhHhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHHHHHHhhcCCCCCCc
Q 025467           78 HYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPE  157 (252)
Q Consensus        78 ~y~aPE~l~~~~~~~~~Diws~G~~l~~l~~g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~  157 (252)
                      .|||||++.+.+|+.++|+||+|+++|+|++|.+||.+.+.......|...-...+                        
T Consensus       190 eYmAPEil~~~gy~~~vDWWsLGillYeML~G~pPF~~~~~~~~~~~I~~~k~~~~------------------------  245 (357)
T KOG0598|consen  190 EYMAPEILLGKGYDKAVDWWSLGILLYEMLTGKPPFYAEDVKKMYDKILKGKLPLP------------------------  245 (357)
T ss_pred             cccChHHHhcCCCCcccchHhHHHHHHHHhhCCCCCcCccHHHHHHHHhcCcCCCC------------------------
Confidence            99999999999999999999999999999999999998776555554433111000                        


Q ss_pred             cccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCCCC---
Q 025467          158 GAASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRL---  234 (252)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~---  234 (252)
                                                                           ..-.+.++++|++++|..||++|.   
T Consensus       246 -----------------------------------------------------p~~ls~~ardll~~LL~rdp~~RLg~~  272 (357)
T KOG0598|consen  246 -----------------------------------------------------PGYLSEEARDLLKKLLKRDPRQRLGGP  272 (357)
T ss_pred             -----------------------------------------------------CccCCHHHHHHHHHHhccCHHHhcCCC
Confidence                                                                 112456899999999999999996   


Q ss_pred             -CHHHHHcCCCCCCc
Q 025467          235 -TAREALRHPFFTRD  248 (252)
Q Consensus       235 -ta~e~l~hpwf~~~  248 (252)
                       .+.++-+||||.+.
T Consensus       273 ~d~~~ik~HpfF~~i  287 (357)
T KOG0598|consen  273 GDAEEIKRHPFFKGI  287 (357)
T ss_pred             CChHHhhcCcccccC
Confidence             69999999999875

>KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms]

Probab=100.00  E-value=1.2e-33  Score=221.72  Aligned_cols=183  Identities=32%  Similarity=0.606  Sum_probs=142.5

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCC--CCccccCCC
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD--QNYIVSTRH   78 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~--~~~~~~t~~   78 (252)
                      |++|||+.||+||||||+||++.                           ....+|+.|||+|......  .+..+.+..
T Consensus       130 ~ik~lhs~~IihRdLkPsnivv~---------------------------~~~~lKi~dfg~ar~e~~~~~mtpyVvtRy  182 (369)
T KOG0665|consen  130 GIKHLHSAGIIHRDLKPSNIVVN---------------------------SDCTLKILDFGLARTEDTDFMMTPYVVTRY  182 (369)
T ss_pred             HHHHHHhcceeecccCcccceec---------------------------chhheeeccchhhcccCcccccCchhheee
Confidence            57899999999999999999994                           4556778888887665444  233578899


Q ss_pred             cccchhhhcCCCCccchhHhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHHHHHHhhcCCCCCCcc
Q 025467           79 YRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEG  158 (252)
Q Consensus        79 y~aPE~l~~~~~~~~~Diws~G~~l~~l~~g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~  158 (252)
                      |+|||++.+..|...+||||+||++.+|++|...|.|.+..+++.++.+.+|++.+.+...+......++... ..+.. 
T Consensus       183 yrapevil~~~~ke~vdiwSvGci~gEli~~~Vlf~g~d~idQ~~ki~~~lgtpd~~F~~qL~~~~r~yv~~~-~~y~~-  260 (369)
T KOG0665|consen  183 YRAPEVILGMGYKENVDIWSVGCIMGELILGTVLFPGKDHIDQWNKIIEQLGTPDPSFMKQLQPTVRNYVENR-PQYQA-  260 (369)
T ss_pred             ccCchheeccCCcccchhhhhhhHHHHHhhceEEecCchHHHHHHHHHHHhcCCCHHHHHHhhHHHHHHhhcC-hHhhc-
Confidence            9999999999999999999999999999999999999999999999999999999999999988887777621 11110 


Q ss_pred             ccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCCCCCHHH
Q 025467          159 AASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTARE  238 (252)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~ta~e  238 (252)
                      .    .+...  +|+...+                            ...+........+++|+.+||..||++|.++++
T Consensus       261 ~----~f~~~--fpD~~f~----------------------------~~~e~~~~~~~~ardll~~MLvi~pe~Risv~d  306 (369)
T KOG0665|consen  261 I----SFSEL--FPDSLFP----------------------------VVLEGSKLDCSLARDLLSKMLVIDPEKRISVDD  306 (369)
T ss_pred             c----chhhh--CCccccc----------------------------ccccCCccchHHHHHHHHHhhccChhhcccHHH
Confidence            0    01111  0110000                            001112345678999999999999999999999


Q ss_pred             HHcCCCCC
Q 025467          239 ALRHPFFT  246 (252)
Q Consensus       239 ~l~hpwf~  246 (252)
                      +|.||||+
T Consensus       307 aL~HPY~~  314 (369)
T KOG0665|consen  307 ALRHPYIK  314 (369)
T ss_pred             HhcCCeee
Confidence            99999997

>KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=7e-34  Score=241.42  Aligned_cols=143  Identities=35%  Similarity=0.611  Sum_probs=116.8

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCC--CccccCCC
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ--NYIVSTRH   78 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~--~~~~~t~~   78 (252)
                      |+.|||..+|+|||+||+|+|+                           +.+..+||+|||+|....+..  ...||+++
T Consensus       124 gv~yCH~~~icHRDLKpENlLL---------------------------d~~~nIKIADFGMAsLe~~gklLeTSCGSPH  176 (786)
T KOG0588|consen  124 GVSYCHAFNICHRDLKPENLLL---------------------------DVKNNIKIADFGMASLEVPGKLLETSCGSPH  176 (786)
T ss_pred             HHHHHhhhcceeccCCchhhhh---------------------------hcccCEeeeccceeecccCCccccccCCCcc
Confidence            6889999999999999999999                           455568999999997655543  34699999


Q ss_pred             cccchhhhcCCC-CccchhHhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHHHHHHhhcCCCCCCc
Q 025467           79 YRAPEVILGLGW-TYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPE  157 (252)
Q Consensus        79 y~aPE~l~~~~~-~~~~Diws~G~~l~~l~~g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~  157 (252)
                      |.|||++.|.+| +.++||||+|||+|.|++|..||.+++-...+.+                       +++|.+..  
T Consensus       177 YA~PEIV~G~pYdG~~sDVWSCGVILfALLtG~LPFdDdNir~LLlK-----------------------V~~G~f~M--  231 (786)
T KOG0588|consen  177 YAAPEIVSGRPYDGRPSDVWSCGVILFALLTGKLPFDDDNIRVLLLK-----------------------VQRGVFEM--  231 (786)
T ss_pred             cCCchhhcCCCCCCCccccchhHHHHHHHHhCCCCCCCccHHHHHHH-----------------------HHcCcccC--
Confidence            999999999999 5789999999999999999999985443222222                       22333322  


Q ss_pred             cccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCCCCCHH
Q 025467          158 GAASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAR  237 (252)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~ta~  237 (252)
                                                                           ...++.++.+||++||++||++|+|.+
T Consensus       232 -----------------------------------------------------Ps~Is~eaQdLLr~ml~VDp~~RiT~~  258 (786)
T KOG0588|consen  232 -----------------------------------------------------PSNISSEAQDLLRRMLDVDPSTRITTE  258 (786)
T ss_pred             -----------------------------------------------------CCcCCHHHHHHHHHHhccCccccccHH
Confidence                                                                 245678999999999999999999999


Q ss_pred             HHHcCCCCCCc
Q 025467          238 EALRHPFFTRD  248 (252)
Q Consensus       238 e~l~hpwf~~~  248 (252)
                      ||++|||+..-
T Consensus       259 eI~kHP~l~g~  269 (786)
T KOG0588|consen  259 EILKHPFLSGY  269 (786)
T ss_pred             HHhhCchhhcC
Confidence            99999999764

>KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism]

Probab=100.00  E-value=6e-34  Score=219.53  Aligned_cols=145  Identities=34%  Similarity=0.569  Sum_probs=115.1

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCCC--ccccCCC
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQN--YIVSTRH   78 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~~--~~~~t~~   78 (252)
                      |++|||..+||||||||+|||+                           +.+..++|.|||.+....+...  ..+||+.
T Consensus       135 gVeylHa~~IVHRDLKpENILl---------------------------ddn~~i~isDFGFa~~l~~GekLrelCGTPg  187 (411)
T KOG0599|consen  135 GVEYLHARNIVHRDLKPENILL---------------------------DDNMNIKISDFGFACQLEPGEKLRELCGTPG  187 (411)
T ss_pred             HHHHHHHhhhhhcccChhheee---------------------------ccccceEEeccceeeccCCchhHHHhcCCCc
Confidence            4689999999999999999999                           6677789999999887666543  3699999


Q ss_pred             cccchhhhc------CCCCccchhHhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHHHHHHhhcCC
Q 025467           79 YRAPEVILG------LGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGR  152 (252)
Q Consensus        79 y~aPE~l~~------~~~~~~~Diws~G~~l~~l~~g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~  152 (252)
                      |.|||.+..      .+|+...|+|++|||+|.++.|++||......-.+..                       +..|.
T Consensus       188 YLAPEtikC~m~e~~pGYs~EVD~Wa~GVImyTLLaGcpPFwHRkQmlMLR~-----------------------ImeGk  244 (411)
T KOG0599|consen  188 YLAPETIKCSMYENHPGYSKEVDEWACGVIMYTLLAGCPPFWHRKQMLMLRM-----------------------IMEGK  244 (411)
T ss_pred             ccChhheeeecccCCCCccchhhHHHHHHHHHHHHcCCCchhHHHHHHHHHH-----------------------HHhcc
Confidence            999999864      3588999999999999999999999964332211111                       12222


Q ss_pred             CCCCccccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCC
Q 025467          153 LDWPEGAASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTD  232 (252)
Q Consensus       153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~  232 (252)
                      +.+.                                                   ...|+..+..++||+.+||++||.+
T Consensus       245 yqF~---------------------------------------------------speWadis~~~KdLIsrlLqVdp~~  273 (411)
T KOG0599|consen  245 YQFR---------------------------------------------------SPEWADISATVKDLISRLLQVDPTK  273 (411)
T ss_pred             cccC---------------------------------------------------CcchhhccccHHHHHHHHHeeCchh
Confidence            2221                                                   1235667789999999999999999


Q ss_pred             CCCHHHHHcCCCCC
Q 025467          233 RLTAREALRHPFFT  246 (252)
Q Consensus       233 R~ta~e~l~hpwf~  246 (252)
                      |+|++|+|+||||.
T Consensus       274 Ritake~LaHpff~  287 (411)
T KOG0599|consen  274 RITAKEALAHPFFI  287 (411)
T ss_pred             cccHHHHhcChHHH
Confidence            99999999999993

>KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms]

Probab=100.00  E-value=7.4e-34  Score=221.32  Aligned_cols=155  Identities=28%  Similarity=0.520  Sum_probs=123.8

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCC--CCccccCCC
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD--QNYIVSTRH   78 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~--~~~~~~t~~   78 (252)
                      |+.|||+++|+||||||+|+|.+...                        .+..+||+|||+|+.....  ....+-|++
T Consensus       173 Av~~lH~~nIAHRDlKpENLLyt~t~------------------------~na~lKLtDfGFAK~t~~~~~L~TPc~TPy  228 (400)
T KOG0604|consen  173 AVRYLHSMNIAHRDLKPENLLYTTTS------------------------PNAPLKLTDFGFAKETQEPGDLMTPCFTPY  228 (400)
T ss_pred             HHHHHHhcchhhccCChhheeeecCC------------------------CCcceEecccccccccCCCccccCCccccc
Confidence            68999999999999999999996543                        4567899999999876643  234577999


Q ss_pred             cccchhhhcCCCCccchhHhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHHHHHHhhcCCCCCCcc
Q 025467           79 YRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEG  158 (252)
Q Consensus        79 y~aPE~l~~~~~~~~~Diws~G~~l~~l~~g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~  158 (252)
                      |.|||++-...|+..+|+||+||++|-|+.|.+||.+....           .++.        ..+..+..|.+.+|. 
T Consensus       229 YvaPevlg~eKydkscdmwSlgVimYIlLCGyPPFYS~hg~-----------aisp--------gMk~rI~~gqy~FP~-  288 (400)
T KOG0604|consen  229 YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGL-----------AISP--------GMKRRIRTGQYEFPE-  288 (400)
T ss_pred             ccCHHHhCchhcCCCCCccchhHHHHHhhcCCCcccccCCc-----------cCCh--------hHHhHhhccCccCCC-
Confidence            99999998889999999999999999999999999765431           1111        112233445555553 


Q ss_pred             ccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCCCCCHHH
Q 025467          159 AASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTARE  238 (252)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~ta~e  238 (252)
                                                                        +.|..+++.++|+|+++|..+|++|+|+++
T Consensus       289 --------------------------------------------------pEWs~VSe~aKdlIR~LLkt~PteRlTI~~  318 (400)
T KOG0604|consen  289 --------------------------------------------------PEWSCVSEAAKDLIRKLLKTEPTERLTIEE  318 (400)
T ss_pred             --------------------------------------------------hhHhHHHHHHHHHHHHHhcCCchhheeHHH
Confidence                                                              235667889999999999999999999999


Q ss_pred             HHcCCCCCCcc
Q 025467          239 ALRHPFFTRDH  249 (252)
Q Consensus       239 ~l~hpwf~~~~  249 (252)
                      ++.|||+....
T Consensus       319 ~m~hpwi~~~~  329 (400)
T KOG0604|consen  319 VMDHPWINQYE  329 (400)
T ss_pred             hhcCchhcccc
Confidence            99999998653

>KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=1.5e-33  Score=235.90  Aligned_cols=146  Identities=28%  Similarity=0.484  Sum_probs=116.2

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCC---CCccccCC
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD---QNYIVSTR   77 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~---~~~~~~t~   77 (252)
                      ||+|||.+||+|||||.+|||++.++                           .+||+|||++......   ....+||+
T Consensus       381 aL~fLH~~gIiHrDIKSDnILL~~~g---------------------------~vKltDFGFcaqi~~~~~KR~TmVGTP  433 (550)
T KOG0578|consen  381 GLKFLHARGIIHRDIKSDNILLTMDG---------------------------SVKLTDFGFCAQISEEQSKRSTMVGTP  433 (550)
T ss_pred             HHHHHHhcceeeeccccceeEeccCC---------------------------cEEEeeeeeeeccccccCccccccCCC
Confidence            79999999999999999999995544                           4666666665443332   23468999


Q ss_pred             CcccchhhhcCCCCccchhHhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHHHHHHhhcCCCCCCc
Q 025467           78 HYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPE  157 (252)
Q Consensus        78 ~y~aPE~l~~~~~~~~~Diws~G~~l~~l~~g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~  157 (252)
                      +|||||++....|+++.||||||++.+||+.|++||-..+....+..| ...|++.                   +    
T Consensus       434 YWMAPEVvtrk~YG~KVDIWSLGIMaIEMveGEPPYlnE~PlrAlyLI-a~ng~P~-------------------l----  489 (550)
T KOG0578|consen  434 YWMAPEVVTRKPYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLI-ATNGTPK-------------------L----  489 (550)
T ss_pred             CccchhhhhhcccCccccchhhhhHHHHHhcCCCCccCCChHHHHHHH-hhcCCCC-------------------c----
Confidence            999999999999999999999999999999999999765554444333 3333321                   1    


Q ss_pred             cccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCCCCCHH
Q 025467          158 GAASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAR  237 (252)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~ta~  237 (252)
                                                                         +.....+.++++||.+||++||++|+||.
T Consensus       490 ---------------------------------------------------k~~~klS~~~kdFL~~cL~~dv~~RasA~  518 (550)
T KOG0578|consen  490 ---------------------------------------------------KNPEKLSPELKDFLDRCLVVDVEQRASAK  518 (550)
T ss_pred             ---------------------------------------------------CCccccCHHHHHHHHHHhhcchhcCCCHH
Confidence                                                               11245678999999999999999999999


Q ss_pred             HHHcCCCCCCc
Q 025467          238 EALRHPFFTRD  248 (252)
Q Consensus       238 e~l~hpwf~~~  248 (252)
                      |+|+||||++.
T Consensus       519 eLL~HpFl~~a  529 (550)
T KOG0578|consen  519 ELLEHPFLKMA  529 (550)
T ss_pred             HHhcChhhhhc
Confidence            99999999764

>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase

Probab=100.00  E-value=3.8e-33  Score=228.30  Aligned_cols=170  Identities=31%  Similarity=0.552  Sum_probs=123.3

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCC---CCccccCC
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD---QNYIVSTR   77 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~---~~~~~~t~   77 (252)
                      ||+|||++||+||||||+|||++.+                           +.++|+|||.+......   .....+++
T Consensus       115 aL~~LH~~~ivH~dlkp~Nil~~~~---------------------------~~~kl~DfG~~~~~~~~~~~~~~~~~~~  167 (288)
T cd07871         115 GLSYCHKRKILHRDLKPQNLLINEK---------------------------GELKLADFGLARAKSVPTKTYSNEVVTL  167 (288)
T ss_pred             HHHHHHhCCcccCCCCHHHEEECCC---------------------------CCEEECcCcceeeccCCCccccCceecc
Confidence            6899999999999999999999544                           44667777766432211   12236788


Q ss_pred             Ccccchhhhc-CCCCccchhHhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHHHHHHhhcCCCCCC
Q 025467           78 HYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWP  156 (252)
Q Consensus        78 ~y~aPE~l~~-~~~~~~~Diws~G~~l~~l~~g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~  156 (252)
                      .|+|||++.+ ..++.++||||+||++|+|++|..||.+.+..+.+..+....+.++.+.+..........    ....+
T Consensus       168 ~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~  243 (288)
T cd07871         168 WYRPPDVLLGSTEYSTPIDMWGVGCILYEMATGRPMFPGSTVKEELHLIFRLLGTPTEETWPGITSNEEFR----SYLFP  243 (288)
T ss_pred             cccChHHhcCCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHHhhccccchhhh----ccccC
Confidence            9999999876 458899999999999999999999999888888888888888888776544322111000    00000


Q ss_pred             ccccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCCCCCH
Q 025467          157 EGAASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTA  236 (252)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~ta  236 (252)
                      ...                                            ...........+.++++||++||++||.+||||
T Consensus       244 ~~~--------------------------------------------~~~~~~~~~~~~~~~~dll~~mL~~dp~~R~t~  279 (288)
T cd07871         244 QYR--------------------------------------------AQPLINHAPRLDTDGIDLLSSLLLYETKSRISA  279 (288)
T ss_pred             ccC--------------------------------------------CCchHHhCCCCCHHHHHHHHHhcCcCcccCCCH
Confidence            000                                            000001123456789999999999999999999


Q ss_pred             HHHHcCCCC
Q 025467          237 REALRHPFF  245 (252)
Q Consensus       237 ~e~l~hpwf  245 (252)
                      +|+|+||||
T Consensus       280 ~~~l~hp~f  288 (288)
T cd07871         280 EAALRHSYF  288 (288)
T ss_pred             HHHhcCCCC
Confidence            999999998

Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament

>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5

Probab=100.00  E-value=8.7e-33  Score=225.87  Aligned_cols=172  Identities=34%  Similarity=0.598  Sum_probs=126.2

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCC----CCccccC
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD----QNYIVST   76 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~----~~~~~~t   76 (252)
                      ||+|||+.||+||||||+||+++.+                           +.++|+|||.+......    .....|+
T Consensus       112 ~L~~lH~~~i~H~dlkp~Nill~~~---------------------------~~~kl~Dfg~~~~~~~~~~~~~~~~~~~  164 (287)
T cd07848         112 AIHWCHKNDIVHRDIKPENLLISHN---------------------------DVLKLCDFGFARNLSEGSNANYTEYVAT  164 (287)
T ss_pred             HHHHHHHCCeecCCCCHHHEEEcCC---------------------------CcEEEeeccCcccccccccccccccccc
Confidence            6899999999999999999999543                           45677777766543221    1224678


Q ss_pred             CCcccchhhhcCCCCccchhHhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHHHHHHhhcCCCCCC
Q 025467           77 RHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWP  156 (252)
Q Consensus        77 ~~y~aPE~l~~~~~~~~~Diws~G~~l~~l~~g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~  156 (252)
                      ..|+|||++.+..++.++|+||+||++|++++|+.||.+.+..+....+....+++|.............  .  ....+
T Consensus       165 ~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~--~~~~~  240 (287)
T cd07848         165 RWYRSPELLLGAPYGKAVDMWSVGCILGELSDGQPLFPGESEIDQLFTIQKVLGPLPAEQMKLFYSNPRF--H--GLRFP  240 (287)
T ss_pred             cccCCcHHHcCCCCCCchhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHhhhccchh--c--ccccC
Confidence            8999999999888999999999999999999999999988888888888888999887665432211000  0  00000


Q ss_pred             ccccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCCCCCH
Q 025467          157 EGAASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTA  236 (252)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~ta  236 (252)
                      ...                .                          ............+.++.+||.+||++||++|||+
T Consensus       241 ~~~----------------~--------------------------~~~~~~~~~~~~s~~~~dll~~~L~~~P~~R~s~  278 (287)
T cd07848         241 AVN----------------H--------------------------PQSLERRYLGILSGVLLDLMKNLLKLNPTDRYLT  278 (287)
T ss_pred             ccc----------------C--------------------------cccHHHhhhcccCHHHHHHHHHHccCCcccCCCH
Confidence            000                0                          0000111223466789999999999999999999


Q ss_pred             HHHHcCCCC
Q 025467          237 REALRHPFF  245 (252)
Q Consensus       237 ~e~l~hpwf  245 (252)
                      +++|+||||
T Consensus       279 ~~~l~hp~f  287 (287)
T cd07848         279 EQCLNHPAF  287 (287)
T ss_pred             HHHhcCCCC
Confidence            999999998

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes

>KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription]

Probab=100.00  E-value=1.4e-33  Score=220.88  Aligned_cols=186  Identities=32%  Similarity=0.511  Sum_probs=136.7

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCC------Cccc
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ------NYIV   74 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~------~~~~   74 (252)
                      ++.|||++.|+||||||.|||+..++                       ...+.+||+|+|+++......      ...+
T Consensus       144 Gv~YLH~NWvlHRDLKPaNIlvmgdg-----------------------perG~VKIaDlGlaR~~~~plkpl~s~d~VV  200 (438)
T KOG0666|consen  144 GVHYLHSNWVLHRDLKPANILVMGDG-----------------------PERGRVKIADLGLARLFNNPLKPLASLDPVV  200 (438)
T ss_pred             hhHHHhhhheeeccCCcceEEEeccC-----------------------CccCeeEeecccHHHHhhccccccccCCceE
Confidence            57899999999999999999998776                       567788999999987654432      1246


Q ss_pred             cCCCcccchhhhcC-CCCccchhHhHHHHHHHHHhCCCCCCCCC---------hHHHHHHHHHHhCCCchHHHHHhhHHH
Q 025467           75 STRHYRAPEVILGL-GWTYPCDIWSVGCILVELCTGEALFQTHE---------NLEHLAMMERVLGPLPQHMLKRVDRHA  144 (252)
Q Consensus        75 ~t~~y~aPE~l~~~-~~~~~~Diws~G~~l~~l~~g~~pf~~~~---------~~~~~~~~~~~~g~~p~~~~~~~~~~~  144 (252)
                      -|.+|+|||++.+. .|+++.|+|++|||+.||++-.+.|.+..         ..+++.+|.+++|.+.+.-|..+.+.-
T Consensus       201 VTiWYRAPELLLGa~hYT~AiDvWAiGCIfaElLtl~PlF~g~E~k~~~~~Pfq~dQl~rIf~vLG~Pt~~~Wp~lkk~P  280 (438)
T KOG0666|consen  201 VTIWYRAPELLLGARHYTKAIDVWAIGCIFAELLTLEPLFKGREEKIKTKNPFQHDQLDRIFEVLGTPTDKDWPDLKKMP  280 (438)
T ss_pred             EEEEecChHHhcccccccchhhhHHHHHHHHHHHccCccccchhhhcccCCCchHHHHHHHHHHcCCCccccchhhhhCc
Confidence            68999999999987 58999999999999999999999997653         357889999999998876665554433


Q ss_pred             HHHhhcCCCCCCccccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHH
Q 025467          145 EKYVRRGRLDWPEGAASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQG  224 (252)
Q Consensus       145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~  224 (252)
                      ++...-..+...  -....++                                       ......+..-++...+||.+
T Consensus       281 e~q~~ls~f~~~--~~~n~sL---------------------------------------~~~~~~~k~k~~~a~~LL~k  319 (438)
T KOG0666|consen  281 EYQTLLSDFRRH--YYDNVSL---------------------------------------HKYYHKHKVKDPSALDLLQK  319 (438)
T ss_pred             chHHHHHHhHHh--hcCcchH---------------------------------------HHHHHHhcCCCchHHHHHHH
Confidence            221100000000  0000000                                       00111223344569999999


Q ss_pred             hccCCCCCCCCHHHHHcCCCCCCccc
Q 025467          225 LLRYDPTDRLTAREALRHPFFTRDHL  250 (252)
Q Consensus       225 ~L~~dP~~R~ta~e~l~hpwf~~~~~  250 (252)
                      ||++||-+|+||+++|+|+||.+++.
T Consensus       320 lL~yDP~kRIta~qAleh~yF~~d~l  345 (438)
T KOG0666|consen  320 LLTYDPIKRITAEQALEHPYFTEDPL  345 (438)
T ss_pred             HhccCchhhccHHHHhcccccccCCC
Confidence            99999999999999999999999854

>KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms]

Probab=100.00  E-value=2.1e-33  Score=218.35  Aligned_cols=144  Identities=28%  Similarity=0.483  Sum_probs=122.8

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCCCccccCCCcc
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYR   80 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~~~~~~t~~y~   80 (252)
                      ||+|||+.+|++|||||+|||+                           +.++.+|++|||.|+......-..|||+-|+
T Consensus       156 AleylH~~~iiYRDLKPENiLl---------------------------D~~G~iKitDFGFAK~v~~rT~TlCGTPeYL  208 (355)
T KOG0616|consen  156 ALEYLHSLDIIYRDLKPENLLL---------------------------DQNGHIKITDFGFAKRVSGRTWTLCGTPEYL  208 (355)
T ss_pred             HHHHHHhcCeeeccCChHHeee---------------------------ccCCcEEEEeccceEEecCcEEEecCCcccc
Confidence            7999999999999999999999                           6677899999999998777766689999999


Q ss_pred             cchhhhcCCCCccchhHhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHHHHHHhhcCCCCCCcccc
Q 025467           81 APEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAA  160 (252)
Q Consensus        81 aPE~l~~~~~~~~~Diws~G~~l~~l~~g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (252)
                      |||++...+|+.++|.|||||++|||+.|.+||...+.....+.|..--                       ..+|    
T Consensus       209 APEii~sk~ynkavDWWalGVLIYEMlaG~pPF~~~~~~~iY~KI~~~~-----------------------v~fP----  261 (355)
T KOG0616|consen  209 APEIIQSKGYNKAVDWWALGVLIYEMLAGYPPFYDDNPIQIYEKILEGK-----------------------VKFP----  261 (355)
T ss_pred             ChHHhhcCCCCcchhHHHHHHHHHHHHcCCCCCcCCChHHHHHHHHhCc-----------------------ccCC----
Confidence            9999999999999999999999999999999998877755555543321                       2222    


Q ss_pred             chhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCCCC-----C
Q 025467          161 SRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRL-----T  235 (252)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~-----t  235 (252)
                                                                         .-.+.+++|||+++|++|-.+|.     .
T Consensus       262 ---------------------------------------------------~~fs~~~kdLl~~LL~vD~t~R~gnlknG  290 (355)
T KOG0616|consen  262 ---------------------------------------------------SYFSSDAKDLLKKLLQVDLTKRFGNLKNG  290 (355)
T ss_pred             ---------------------------------------------------cccCHHHHHHHHHHHhhhhHhhhcCcCCC
Confidence                                                               12346899999999999999993     5


Q ss_pred             HHHHHcCCCCCCcc
Q 025467          236 AREALRHPFFTRDH  249 (252)
Q Consensus       236 a~e~l~hpwf~~~~  249 (252)
                      ..++..||||++..
T Consensus       291 ~~dIk~H~wF~~v~  304 (355)
T KOG0616|consen  291 VEDIKNHPWFKGVD  304 (355)
T ss_pred             ccccccCccccccc
Confidence            88999999999764

>PTZ00036 glycogen synthase kinase; Provisional

Probab=100.00  E-value=9.3e-33  Score=238.17  Aligned_cols=173  Identities=31%  Similarity=0.590  Sum_probs=127.8

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCC--CccccCCC
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ--NYIVSTRH   78 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~--~~~~~t~~   78 (252)
                      ||+|||++||+||||||+|||++..                          ...+||+|||+++......  ....||+.
T Consensus       182 gL~yLH~~~IiHrDLKp~NILl~~~--------------------------~~~vkL~DFGla~~~~~~~~~~~~~~t~~  235 (440)
T PTZ00036        182 ALAYIHSKFICHRDLKPQNLLIDPN--------------------------THTLKLCDFGSAKNLLAGQRSVSYICSRF  235 (440)
T ss_pred             HHHHHHHCCEecCCcCHHHEEEcCC--------------------------CCceeeeccccchhccCCCCcccCCCCcC
Confidence            6899999999999999999999432                          2357888888876543222  22467899


Q ss_pred             cccchhhhcC-CCCccchhHhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHHHHHHhhcCCCCCCc
Q 025467           79 YRAPEVILGL-GWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPE  157 (252)
Q Consensus        79 y~aPE~l~~~-~~~~~~Diws~G~~l~~l~~g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~  157 (252)
                      |+|||++.+. .|+.++||||+||++|+|++|.+||.+....+.+..+...+|.++.+..........      ...++.
T Consensus       236 y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~~~~~~------~~~~~~  309 (440)
T PTZ00036        236 YRAPELMLGATNYTTHIDLWSLGCIIAEMILGYPIFSGQSSVDQLVRIIQVLGTPTEDQLKEMNPNYA------DIKFPD  309 (440)
T ss_pred             ccCHHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhchhhh------cccCCc
Confidence            9999998765 689999999999999999999999999888888999999999887655443221100      000110


Q ss_pred             cccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCCCCCHH
Q 025467          158 GAASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAR  237 (252)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~ta~  237 (252)
                      .  ...                                         ..........+.++.+||.+||++||.+|+||.
T Consensus       310 ~--~~~-----------------------------------------~l~~~~p~~~~~~~~~li~~~L~~dP~~R~ta~  346 (440)
T PTZ00036        310 V--KPK-----------------------------------------DLKKVFPKGTPDDAINFISQFLKYEPLKRLNPI  346 (440)
T ss_pred             c--Cch-----------------------------------------hHHHHhccCCCHHHHHHHHHHCCCChhHCcCHH
Confidence            0  000                                         000111233567899999999999999999999


Q ss_pred             HHHcCCCCCCc
Q 025467          238 EALRHPFFTRD  248 (252)
Q Consensus       238 e~l~hpwf~~~  248 (252)
                      |+|+||||...
T Consensus       347 e~l~hp~f~~~  357 (440)
T PTZ00036        347 EALADPFFDDL  357 (440)
T ss_pred             HHhCChhHHhh
Confidence            99999999753

>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1

Probab=100.00  E-value=2.9e-32  Score=230.19  Aligned_cols=184  Identities=31%  Similarity=0.532  Sum_probs=133.3

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCC--CCccccCCC
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD--QNYIVSTRH   78 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~--~~~~~~t~~   78 (252)
                      ||+|||++||+||||||+|||++.                           ++.++|+|||++......  .....+|..
T Consensus       138 aL~~LH~~~ivH~Dlkp~NIll~~---------------------------~~~~kL~DfG~a~~~~~~~~~~~~~~t~~  190 (364)
T cd07875         138 GIKHLHSAGIIHRDLKPSNIVVKS---------------------------DCTLKILDFGLARTAGTSFMMTPYVVTRY  190 (364)
T ss_pred             HHHHHhhCCeecCCCCHHHEEECC---------------------------CCcEEEEeCCCccccCCCCcccCCcccCC
Confidence            689999999999999999999943                           445777888877644332  123467899


Q ss_pred             cccchhhhcCCCCccchhHhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHHHHHHhhcCCCCCCcc
Q 025467           79 YRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEG  158 (252)
Q Consensus        79 y~aPE~l~~~~~~~~~Diws~G~~l~~l~~g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~  158 (252)
                      |+|||++.+..++.++||||+||++|+|++|..||.+.+..+.+..+....+.++.++...+......+....... ...
T Consensus       191 y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~  269 (364)
T cd07875         191 YRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQPTVRTYVENRPKY-AGY  269 (364)
T ss_pred             cCCHHHHhCCCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHhhhHHHHHHHhhCCCc-CCC
Confidence            9999999998899999999999999999999999999888888888888888887777666655444443322110 000


Q ss_pred             ccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCCCCCHHH
Q 025467          159 AASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTARE  238 (252)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~ta~e  238 (252)
                        .   .....  +...                            ...........+.++++||.+||+.||.+|||+.+
T Consensus       270 --~---~~~~~--~~~~----------------------------~~~~~~~~~~~~~~~~dll~~mL~~dP~~R~t~~e  314 (364)
T cd07875         270 --S---FEKLF--PDVL----------------------------FPADSEHNKLKASQARDLLSKMLVIDASKRISVDE  314 (364)
T ss_pred             --C---hHhhC--cccc----------------------------ccccccccccccHHHHHHHHHhcCcCcccCCCHHH
Confidence              0   00000  0000                            00000112234568899999999999999999999


Q ss_pred             HHcCCCCCC
Q 025467          239 ALRHPFFTR  247 (252)
Q Consensus       239 ~l~hpwf~~  247 (252)
                      +|+||||..
T Consensus       315 ~L~hp~~~~  323 (364)
T cd07875         315 ALQHPYINV  323 (364)
T ss_pred             HhcCccccc
Confidence            999999964

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2

Probab=100.00  E-value=2.9e-32  Score=229.74  Aligned_cols=184  Identities=32%  Similarity=0.576  Sum_probs=132.7

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCC--CCccccCCC
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD--QNYIVSTRH   78 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~--~~~~~~t~~   78 (252)
                      ||+|||++||+||||||+|||++.                           ++.++|+|||.+......  .....+|..
T Consensus       135 ~L~~LH~~~ivHrDlkp~NIl~~~---------------------------~~~~kl~Dfg~a~~~~~~~~~~~~~~t~~  187 (359)
T cd07876         135 GIKHLHSAGIIHRDLKPSNIVVKS---------------------------DCTLKILDFGLARTACTNFMMTPYVVTRY  187 (359)
T ss_pred             HHHHHHhCCcccCCCCHHHEEECC---------------------------CCCEEEecCCCccccccCccCCCCcccCC
Confidence            689999999999999999999954                           445677777776543222  122467889


Q ss_pred             cccchhhhcCCCCccchhHhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHHHHHHhhcCCCCCCcc
Q 025467           79 YRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEG  158 (252)
Q Consensus        79 y~aPE~l~~~~~~~~~Diws~G~~l~~l~~g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~  158 (252)
                      |+|||++.+..++.++||||+||++|+|++|..||.+.+..+.+..+....+.++.++..........+.... ..++..
T Consensus       188 y~aPE~~~~~~~~~~~DiwSlG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~  266 (359)
T cd07876         188 YRAPEVILGMGYKENVDIWSVGCIMGELVKGSVIFQGTDHIDQWNKVIEQLGTPSAEFMNRLQPTVRNYVENR-PQYPGI  266 (359)
T ss_pred             CCCchhccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHhhC-CCCCCc
Confidence            9999999988899999999999999999999999999888888888999999888877766655444433221 111110


Q ss_pred             ccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCCCCCHHH
Q 025467          159 AASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTARE  238 (252)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~ta~e  238 (252)
                      .     ....              +..+..                ..........++++.+||.+||++||++|||+.|
T Consensus       267 ~-----~~~~--------------~~~~~~----------------~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e  311 (359)
T cd07876         267 S-----FEEL--------------FPDWIF----------------PSESERDKLKTSQARDLLSKMLVIDPDKRISVDE  311 (359)
T ss_pred             c-----hhhh--------------cccccc----------------ccccccccccchhHHHHHHHHhccCcccCCCHHH
Confidence            0     0000              000000                0000111234568999999999999999999999


Q ss_pred             HHcCCCCCC
Q 025467          239 ALRHPFFTR  247 (252)
Q Consensus       239 ~l~hpwf~~  247 (252)
                      +|+||||+.
T Consensus       312 ~l~hp~~~~  320 (359)
T cd07876         312 ALRHPYITV  320 (359)
T ss_pred             HhcCchhhh
Confidence            999999963

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8

Probab=100.00  E-value=1.7e-32  Score=227.30  Aligned_cols=182  Identities=29%  Similarity=0.545  Sum_probs=120.9

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCC------CCccc
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD------QNYIV   74 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~------~~~~~   74 (252)
                      ||+|||++||+||||||+|||+...+                       .....++|+|||.+......      .....
T Consensus       120 al~~LH~~~ivHrDlkp~Nil~~~~~-----------------------~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~  176 (317)
T cd07868         120 GIHYLHANWVLHRDLKPANILVMGEG-----------------------PERGRVKIADMGFARLFNSPLKPLADLDPVV  176 (317)
T ss_pred             HHHHHHhCCEEcCCCCHHHEEEecCC-----------------------CCcCcEEEeecCceeccCCCCccccccCCcc
Confidence            68999999999999999999995432                       23456788888887643321      12246


Q ss_pred             cCCCcccchhhhcC-CCCccchhHhHHHHHHHHHhCCCCCCCCCh---------HHHHHHHHHHhCCCchHHHHHhhHHH
Q 025467           75 STRHYRAPEVILGL-GWTYPCDIWSVGCILVELCTGEALFQTHEN---------LEHLAMMERVLGPLPQHMLKRVDRHA  144 (252)
Q Consensus        75 ~t~~y~aPE~l~~~-~~~~~~Diws~G~~l~~l~~g~~pf~~~~~---------~~~~~~~~~~~g~~p~~~~~~~~~~~  144 (252)
                      +|+.|+|||++.+. .++.++||||+||++|+|++|.+||.+..+         ...+..+....|.++...+.......
T Consensus       177 ~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  256 (317)
T cd07868         177 VTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFNVMGFPADKDWEDIKKMP  256 (317)
T ss_pred             ccccccCCHHHcCCCCcCchhhHHHHHHHHHHHHhCCCCccCCcccccccccccHHHHHHHHHhcCCCChHHhHHHhhcc
Confidence            78999999999874 578999999999999999999999975432         35566777777766654433322110


Q ss_pred             HHHhhcCCCCCCccccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHH
Q 025467          145 EKYVRRGRLDWPEGAASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQG  224 (252)
Q Consensus       145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~  224 (252)
                      .....               ........ .             .     .+  ..    ...........+..+.+||++
T Consensus       257 ~~~~~---------------~~~~~~~~-~-------------~-----~~--~~----~~~~~~~~~~~~~~~~dli~~  296 (317)
T cd07868         257 EHSTL---------------MKDFRRNT-Y-------------T-----NC--SL----IKYMEKHKVKPDSKAFHLLQK  296 (317)
T ss_pred             chhhh---------------hhhhhccc-c-------------C-----cc--cc----cchHHhcCCCCChHHHHHHHH
Confidence            00000               00000000 0             0     00  00    000011112345678999999


Q ss_pred             hccCCCCCCCCHHHHHcCCCC
Q 025467          225 LLRYDPTDRLTAREALRHPFF  245 (252)
Q Consensus       225 ~L~~dP~~R~ta~e~l~hpwf  245 (252)
                      ||++||.+||||+|+|+||||
T Consensus       297 mL~~dP~~R~t~~e~l~hp~f  317 (317)
T cd07868         297 LLTMDPIKRITSEQAMQDPYF  317 (317)
T ss_pred             HhccCcccCCCHHHHhcCCCC
Confidence            999999999999999999998

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p

>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=7.5e-33  Score=231.64  Aligned_cols=142  Identities=32%  Similarity=0.547  Sum_probs=114.7

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCC-CceEEeecCCccccC---CCCCccccC
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKS-SAIKVIDFGSTTYER---PDQNYIVST   76 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~-~~~~l~dfg~~~~~~---~~~~~~~~t   76 (252)
                      |++|||++||+||||||+|||++                           .. ..+||+|||++....   ......+||
T Consensus       132 av~y~H~~gi~HRDLK~ENilld---------------------------~~~~~~Kl~DFG~s~~~~~~~~~l~t~cGs  184 (370)
T KOG0583|consen  132 AVAYCHSRGIVHRDLKPENILLD---------------------------GNEGNLKLSDFGLSAISPGEDGLLKTFCGS  184 (370)
T ss_pred             HHHHHHhCCEeeCCCCHHHEEec---------------------------CCCCCEEEeccccccccCCCCCcccCCCCC
Confidence            68999999999999999999994                           44 678899999887662   233446999


Q ss_pred             CCcccchhhhcCC-CC-ccchhHhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHHHHHHhhcCCCC
Q 025467           77 RHYRAPEVILGLG-WT-YPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLD  154 (252)
Q Consensus        77 ~~y~aPE~l~~~~-~~-~~~Diws~G~~l~~l~~g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~  154 (252)
                      +.|+|||++.+.. |. .++||||+||+||.|++|+.||...+.......                       +.++.+.
T Consensus       185 p~Y~aPEvl~~~~~Y~g~~aDvWS~GViLy~ml~G~~PF~d~~~~~l~~k-----------------------i~~~~~~  241 (370)
T KOG0583|consen  185 PAYAAPEVLSGKGTYSGKAADVWSLGVILYVLLCGRLPFDDSNVPNLYRK-----------------------IRKGEFK  241 (370)
T ss_pred             cccCCHHHhCCCCCcCCchhhhhhhHHHHHHHHhCCCCCCCccHHHHHHH-----------------------HhcCCcc
Confidence            9999999999987 85 889999999999999999999987443332222                       1223333


Q ss_pred             CCccccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccc-hhhHHHHHHHhccCCCCCC
Q 025467          155 WPEGAASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHS-AGDLTHLLQGLLRYDPTDR  233 (252)
Q Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ll~~~L~~dP~~R  233 (252)
                      .|..                                                       . +.++.+|+++||+.||.+|
T Consensus       242 ~p~~-------------------------------------------------------~~S~~~~~Li~~mL~~~P~~R  266 (370)
T KOG0583|consen  242 IPSY-------------------------------------------------------LLSPEARSLIEKMLVPDPSTR  266 (370)
T ss_pred             CCCC-------------------------------------------------------cCCHHHHHHHHHHcCCCcccC
Confidence            3321                                                       2 5689999999999999999


Q ss_pred             CCHHHHHcCCCCCC
Q 025467          234 LTAREALRHPFFTR  247 (252)
Q Consensus       234 ~ta~e~l~hpwf~~  247 (252)
                      +|+.++++||||+.
T Consensus       267 ~t~~~i~~h~w~~~  280 (370)
T KOG0583|consen  267 ITLLEILEHPWFQK  280 (370)
T ss_pred             CCHHHHhhChhhcc
Confidence            99999999999997

>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase

Probab=100.00  E-value=3e-32  Score=228.33  Aligned_cols=173  Identities=32%  Similarity=0.592  Sum_probs=126.4

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCCCccccCCCcc
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYR   80 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~~~~~~t~~y~   80 (252)
                      ||+|||++||+||||||+||+++.                           ++.++|+|||++..........+||..|+
T Consensus       130 aL~~LH~~~ivHrdikp~Nil~~~---------------------------~~~~kl~Dfg~~~~~~~~~~~~~~t~~y~  182 (343)
T cd07878         130 GLKYIHSAGIIHRDLKPSNVAVNE---------------------------DCELRILDFGLARQADDEMTGYVATRWYR  182 (343)
T ss_pred             HHHHHHHCCeecccCChhhEEECC---------------------------CCCEEEcCCccceecCCCcCCcccccccc
Confidence            689999999999999999999954                           34567777777665444444457899999


Q ss_pred             cchhhhc-CCCCccchhHhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHHH-HHHhhcCCCCCCcc
Q 025467           81 APEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHA-EKYVRRGRLDWPEG  158 (252)
Q Consensus        81 aPE~l~~-~~~~~~~Diws~G~~l~~l~~g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~-~~~~~~~~~~~~~~  158 (252)
                      |||++.+ ..++.++||||+||++|+|++|..||.+.+..+.+..+....+..+.+......... ..+... ....+. 
T Consensus       183 aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-  260 (343)
T cd07878         183 APEIMLNWMHYNQTVDIWSVGCIMAELLKGKALFPGNDYIDQLKRIMEVVGTPSPEVLKKISSEHARKYIQS-LPHMPQ-  260 (343)
T ss_pred             CchHhcCCccCCchhhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhcchhhHHHHhhc-cccccc-
Confidence            9999877 467899999999999999999999999888778888888888877665544332211 111100 000000 


Q ss_pred             ccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCCCCCHHH
Q 025467          159 AASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTARE  238 (252)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~ta~e  238 (252)
                                                                    ..........++.+.+|+.+||++||.+|||+.|
T Consensus       261 ----------------------------------------------~~~~~~~~~~~~~~~~li~~mL~~dp~~R~s~~e  294 (343)
T cd07878         261 ----------------------------------------------QDLKKIFRGANPLAIDLLEKMLVLDSDKRISASE  294 (343)
T ss_pred             ----------------------------------------------hhHHHhccCCCHHHHHHHHHHcCCChhhCCCHHH
Confidence                                                          0000111234457899999999999999999999


Q ss_pred             HHcCCCCCCc
Q 025467          239 ALRHPFFTRD  248 (252)
Q Consensus       239 ~l~hpwf~~~  248 (252)
                      +|+||||...
T Consensus       295 ll~hp~~~~~  304 (343)
T cd07878         295 ALAHPYFSQY  304 (343)
T ss_pred             HhcCcchhcc
Confidence            9999999864

Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is

>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]

Probab=100.00  E-value=6.1e-33  Score=230.84  Aligned_cols=174  Identities=33%  Similarity=0.491  Sum_probs=126.5

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCcccc-C----C-CCCCceEEeecCCc--cccC-----
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFK-R----M-PKSSAIKVIDFGST--TYER-----   67 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~-~----~-~~~~~~~l~dfg~~--~~~~-----   67 (252)
                      |++.||+.|+|||||||+|+|++..|..+++|||++........... .    + ......+-.||...  ....     
T Consensus       253 AI~~iH~~gyIHRDIKPdNlLiD~~GHiKLSDFGLs~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  332 (550)
T KOG0605|consen  253 AIESIHQLGYIHRDIKPDNLLIDAKGHIKLSDFGLSTGLDKKHRIESYRLDEQMQINLSEAKPSDFPKFNTPRSTMSRRE  332 (550)
T ss_pred             HHHHHHHcCcccccCChhheeecCCCCEeeccccccchhhhhhhhhhhcchhhhhhhhccCCCccccccccccchhhHHH
Confidence            67889999999999999999999999999999999955432221100 0    0 00011122233311  0000     


Q ss_pred             ----------CCCCccccCCCcccchhhhcCCCCccchhHhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHH
Q 025467           68 ----------PDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHML  137 (252)
Q Consensus        68 ----------~~~~~~~~t~~y~aPE~l~~~~~~~~~Diws~G~~l~~l~~g~~pf~~~~~~~~~~~~~~~~g~~p~~~~  137 (252)
                                ......+|||-|+|||++.+.+|+..+|+||+|||+|||+.|.+||.+.+..+.+..|..-...      
T Consensus       333 ~~~~w~~nrr~~a~StVGTPDYiAPEVll~kgY~~~cDwWSLG~ImyEmLvGyPPF~s~tp~~T~rkI~nwr~~------  406 (550)
T KOG0605|consen  333 QLQTWKRNRRQLAYSTVGTPDYIAPEVLLGKGYGKECDWWSLGCIMYEMLVGYPPFCSETPQETYRKIVNWRET------  406 (550)
T ss_pred             HHHHHHhhhhhhhhcccCCccccchHHHhcCCCCccccHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhhh------
Confidence                      0011258999999999999999999999999999999999999999998887777766542211      


Q ss_pred             HHhhHHHHHHhhcCCCCCCccccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhh
Q 025467          138 KRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGD  217 (252)
Q Consensus       138 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  217 (252)
                                     +.+|.                                                     ....+++
T Consensus       407 ---------------l~fP~-----------------------------------------------------~~~~s~e  418 (550)
T KOG0605|consen  407 ---------------LKFPE-----------------------------------------------------EVDLSDE  418 (550)
T ss_pred             ---------------ccCCC-----------------------------------------------------cCcccHH
Confidence                           12221                                                     1234579


Q ss_pred             HHHHHHHhccCCCCCCCC---HHHHHcCCCCCCcc
Q 025467          218 LTHLLQGLLRYDPTDRLT---AREALRHPFFTRDH  249 (252)
Q Consensus       218 ~~~ll~~~L~~dP~~R~t---a~e~l~hpwf~~~~  249 (252)
                      ++|||.+||. ||++|..   ++||.+||||++..
T Consensus       419 A~DLI~rll~-d~~~RLG~~G~~EIK~HPfF~~v~  452 (550)
T KOG0605|consen  419 AKDLITRLLC-DPENRLGSKGAEEIKKHPFFKGVD  452 (550)
T ss_pred             HHHHHHHHhc-CHHHhcCcccHHHHhcCCccccCC
Confidence            9999999999 9999985   99999999999864

>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants

Probab=100.00  E-value=2.3e-32  Score=228.41  Aligned_cols=174  Identities=33%  Similarity=0.527  Sum_probs=126.1

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCC------CCccc
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD------QNYIV   74 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~------~~~~~   74 (252)
                      ||+|||++||+||||||+|||++.++                           .++|+|||.+......      .....
T Consensus       115 aL~~LH~~~ivH~dlkp~NIll~~~~---------------------------~~kL~Dfg~~~~~~~~~~~~~~~~~~~  167 (338)
T cd07859         115 ALKYIHTANVFHRDLKPKNILANADC---------------------------KLKICDFGLARVAFNDTPTAIFWTDYV  167 (338)
T ss_pred             HHHHHHHCCeecCCCCHHHeEECCCC---------------------------cEEEccCccccccccccCccccccCCC
Confidence            68999999999999999999995544                           4566666655432111      11246


Q ss_pred             cCCCcccchhhhc--CCCCccchhHhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHHHH-HHhhcC
Q 025467           75 STRHYRAPEVILG--LGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAE-KYVRRG  151 (252)
Q Consensus        75 ~t~~y~aPE~l~~--~~~~~~~Diws~G~~l~~l~~g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~-~~~~~~  151 (252)
                      ||..|+|||++.+  ..++.++||||+||++|+|++|+.||.+.+....+..+....|.++......+..... .+... 
T Consensus       168 ~t~~y~aPE~~~~~~~~~~~~~DvwSlGvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~-  246 (338)
T cd07859         168 ATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLITDLLGTPSPETISRVRNEKARRYLSS-  246 (338)
T ss_pred             CCCCcCCHHHHhccccccCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhhhhhHHHHHHh-
Confidence            8899999999876  5688999999999999999999999998888888888888889888776555432111 01000 


Q ss_pred             CCCCCccccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCC
Q 025467          152 RLDWPEGAASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPT  231 (252)
Q Consensus       152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~  231 (252)
                                      +.....                               ..........+..+.+|+.+||+.||+
T Consensus       247 ----------------~~~~~~-------------------------------~~~~~~~~~~~~~~~~li~~~l~~~P~  279 (338)
T cd07859         247 ----------------MRKKQP-------------------------------VPFSQKFPNADPLALRLLERLLAFDPK  279 (338)
T ss_pred             ----------------hcccCC-------------------------------CchHHhcCCCChHHHHHHHHHcCcCcc
Confidence                            000000                               000011123456889999999999999


Q ss_pred             CCCCHHHHHcCCCCCCcc
Q 025467          232 DRLTAREALRHPFFTRDH  249 (252)
Q Consensus       232 ~R~ta~e~l~hpwf~~~~  249 (252)
                      +|||++|+++||||+...
T Consensus       280 ~Rpt~~e~l~hp~f~~~~  297 (338)
T cd07859         280 DRPTAEEALADPYFKGLA  297 (338)
T ss_pred             cCCCHHHHhcCchhhhcC
Confidence            999999999999998754

Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos

>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6

Probab=100.00  E-value=1.3e-32  Score=225.12  Aligned_cols=167  Identities=31%  Similarity=0.521  Sum_probs=120.2

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCC--CCccccCCC
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD--QNYIVSTRH   78 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~--~~~~~~t~~   78 (252)
                      ||+|||++||+||||||+|||++.+                           +.++|+|||.+......  .....|++.
T Consensus       122 aL~~lH~~~iiH~dlkp~Nil~~~~---------------------------~~~kl~Dfg~~~~~~~~~~~~~~~~~~~  174 (290)
T cd07862         122 GLDFLHSHRVVHRDLKPQNILVTSS---------------------------GQIKLADFGLARIYSFQMALTSVVVTLW  174 (290)
T ss_pred             HHHHHHHCCeeeCCCCHHHEEEcCC---------------------------CCEEEccccceEeccCCccccccccccc
Confidence            6899999999999999999999544                           34667777766543221  123467899


Q ss_pred             cccchhhhcCCCCccchhHhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHHHHHHhhcCCCCCCcc
Q 025467           79 YRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEG  158 (252)
Q Consensus        79 y~aPE~l~~~~~~~~~Diws~G~~l~~l~~g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~  158 (252)
                      |+|||++.+..++.++||||+||++|+|++|.+||.+..+.+.+..+....+.++...+..........     +  .. 
T Consensus       175 y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~-----~--~~-  246 (290)
T cd07862         175 YRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVALPRQA-----F--HS-  246 (290)
T ss_pred             ccChHHHhCCCCCCccchHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHHhCCCChhhchhhhcccchh-----c--cC-
Confidence            999999988889999999999999999999999999988888888887777654432211100000000     0  00 


Q ss_pred             ccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCCCCCHHH
Q 025467          159 AASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTARE  238 (252)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~ta~e  238 (252)
                                                         .        ............+..+.+|+.+||+.||++|||+.+
T Consensus       247 -----------------------------------~--------~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~  283 (290)
T cd07862         247 -----------------------------------K--------SAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYS  283 (290)
T ss_pred             -----------------------------------C--------CCCCHHHHccCCCHHHHHHHHHHhccCchhcCCHHH
Confidence                                               0        000001112345678899999999999999999999


Q ss_pred             HHcCCCC
Q 025467          239 ALRHPFF  245 (252)
Q Consensus       239 ~l~hpwf  245 (252)
                      +|+||||
T Consensus       284 ~l~hp~f  290 (290)
T cd07862         284 ALSHPYF  290 (290)
T ss_pred             HhcCCCC
Confidence            9999998

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla

>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase

Probab=99.98  E-value=5.4e-32  Score=229.14  Aligned_cols=176  Identities=32%  Similarity=0.593  Sum_probs=128.2

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCC----CCccccC
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD----QNYIVST   76 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~----~~~~~~t   76 (252)
                      ||+|||++||+||||||+|||++.++                           .++|+|||++......    .....++
T Consensus       115 aL~~LH~~~ivH~dlkp~Nili~~~~---------------------------~~kL~Dfg~a~~~~~~~~~~~~~~~~~  167 (372)
T cd07853         115 GLKYLHSAGILHRDIKPGNLLVNSNC---------------------------VLKICDFGLARVEEPDESKHMTQEVVT  167 (372)
T ss_pred             HHHHHHhCCeeCCCCChHHEEECCCC---------------------------CEEeccccceeecccCccccCCCCCcC
Confidence            68999999999999999999995444                           4666666665433221    1123578


Q ss_pred             CCcccchhhhcC-CCCccchhHhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHHHHHHhhcCCCCC
Q 025467           77 RHYRAPEVILGL-GWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDW  155 (252)
Q Consensus        77 ~~y~aPE~l~~~-~~~~~~Diws~G~~l~~l~~g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~  155 (252)
                      ..|+|||++.+. .++.++||||+||++|+|++|+.||.+.+..+++..+....|.++...+..................
T Consensus       168 ~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~  247 (372)
T cd07853         168 QYYRAPEILMGSRHYTSAVDIWSVGCIFAELLGRRILFQAQSPIQQLDLITDLLGTPSLEAMRSACEGARAHILRGPHKP  247 (372)
T ss_pred             CCcCCHHHHcCCCCCCcHHHHHhHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHcCCCCHHHHHHhhHHHHHHHHhCCCCC
Confidence            899999999875 4789999999999999999999999998888899999999998776554443333322222211111


Q ss_pred             CccccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCCCCC
Q 025467          156 PEGAASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLT  235 (252)
Q Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~t  235 (252)
                      +.       ..                                       .........++++.+||.+||++||++|||
T Consensus       248 ~~-------~~---------------------------------------~~~~~~~~~~~~~~~li~~mL~~dP~~R~t  281 (372)
T cd07853         248 PS-------LP---------------------------------------VLYTLSSQATHEAVHLLCRMLVFDPDKRIS  281 (372)
T ss_pred             Cc-------hH---------------------------------------HhcccCCCCCHHHHHHHHHhCCCChhhCcC
Confidence            10       00                                       000111234678999999999999999999


Q ss_pred             HHHHHcCCCCCCcc
Q 025467          236 AREALRHPFFTRDH  249 (252)
Q Consensus       236 a~e~l~hpwf~~~~  249 (252)
                      ++|+|+||||....
T Consensus       282 ~~e~l~hp~~~~~~  295 (372)
T cd07853         282 AADALAHPYLDEGR  295 (372)
T ss_pred             HHHHhcCHhhCCCc
Confidence            99999999998753

Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription

>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3

Probab=99.98  E-value=6e-32  Score=227.52  Aligned_cols=184  Identities=30%  Similarity=0.520  Sum_probs=131.3

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCC--CCccccCCC
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD--QNYIVSTRH   78 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~--~~~~~~t~~   78 (252)
                      ||+|||++||+||||||+|||++.                           ++.++|+|||+++.....  .....+|..
T Consensus       131 aL~~LH~~givHrDikp~Nill~~---------------------------~~~~kl~Dfg~~~~~~~~~~~~~~~~t~~  183 (355)
T cd07874         131 GIKHLHSAGIIHRDLKPSNIVVKS---------------------------DCTLKILDFGLARTAGTSFMMTPYVVTRY  183 (355)
T ss_pred             HHHHHHhCCcccCCCChHHEEECC---------------------------CCCEEEeeCcccccCCCccccCCccccCC
Confidence            689999999999999999999944                           445777777777643322  122468899


Q ss_pred             cccchhhhcCCCCccchhHhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHHHHHHhhcCCCCCCcc
Q 025467           79 YRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEG  158 (252)
Q Consensus        79 y~aPE~l~~~~~~~~~Diws~G~~l~~l~~g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~  158 (252)
                      |+|||++.+..++.++||||+||++|+|++|..||.+.+..+.+..+....+.++.++...+......+..... .+...
T Consensus       184 y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~  262 (355)
T cd07874         184 YRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRP-KYAGL  262 (355)
T ss_pred             ccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhhcHHHHHHHhcCC-ccccc
Confidence            99999999888999999999999999999999999998888888888888887777766665544443332211 00000


Q ss_pred             ccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCCCCCHHH
Q 025467          159 AASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTARE  238 (252)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~ta~e  238 (252)
                       ......      +...                            -..........+.++.+||.+||++||++|||+.|
T Consensus       263 -~~~~~~------~~~~----------------------------~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rps~~e  307 (355)
T cd07874         263 -TFPKLF------PDSL----------------------------FPADSEHNKLKASQARDLLSKMLVIDPAKRISVDE  307 (355)
T ss_pred             -cchhhc------cccc----------------------------cccccccccccchHHHHHHHHHhcCCchhcCCHHH
Confidence             000000      0000                            00000111234568899999999999999999999


Q ss_pred             HHcCCCCCC
Q 025467          239 ALRHPFFTR  247 (252)
Q Consensus       239 ~l~hpwf~~  247 (252)
                      +|+||||..
T Consensus       308 ll~hp~~~~  316 (355)
T cd07874         308 ALQHPYINV  316 (355)
T ss_pred             HhcCcchhc
Confidence            999999963

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok

>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase

Probab=99.97  E-value=3e-32  Score=224.55  Aligned_cols=177  Identities=28%  Similarity=0.449  Sum_probs=118.3

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCC---CCccccCC
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD---QNYIVSTR   77 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~---~~~~~~t~   77 (252)
                      ||+|||++||+||||||+|||++.+                           +.++|+|||.+......   .....+++
T Consensus       115 al~~lH~~~ivH~dlkp~Nill~~~---------------------------~~~kl~Dfg~~~~~~~~~~~~~~~~~~~  167 (303)
T cd07869         115 GLSYIHQRYILHRDLKPQNLLISDT---------------------------GELKLADFGLARAKSVPSHTYSNEVVTL  167 (303)
T ss_pred             HHHHHHHCCeecCCCCHHHEEECCC---------------------------CCEEECCCCcceeccCCCccCCCCcccC
Confidence            6899999999999999999999543                           45677777766432211   12246788


Q ss_pred             CcccchhhhcC-CCCccchhHhHHHHHHHHHhCCCCCCCCCh-HHHHHHHHHHhCCCchHHHHHhhHHHHHHhhcCCCCC
Q 025467           78 HYRAPEVILGL-GWTYPCDIWSVGCILVELCTGEALFQTHEN-LEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDW  155 (252)
Q Consensus        78 ~y~aPE~l~~~-~~~~~~Diws~G~~l~~l~~g~~pf~~~~~-~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~  155 (252)
                      .|+|||++.+. .++.++||||+||++|+|++|..||.+..+ ...+..+....+.+....+........ +       .
T Consensus       168 ~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-------~  239 (303)
T cd07869         168 WYRPPDVLLGSTEYSTCLDMWGVGCIFVEMIQGVAAFPGMKDIQDQLERIFLVLGTPNEDTWPGVHSLPH-F-------K  239 (303)
T ss_pred             CCCChHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHHhCCCChhhccchhhccc-c-------c
Confidence            99999998764 578899999999999999999999987544 355666666666554433221110000 0       0


Q ss_pred             CccccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCCCCC
Q 025467          156 PEGAASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLT  235 (252)
Q Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~t  235 (252)
                      +..      ..      .                    ........      .......+..+.+|+.+||++||++|||
T Consensus       240 ~~~------~~------~--------------------~~~~~~~~------~~~~~~~~~~~~dli~~mL~~dp~~R~s  281 (303)
T cd07869         240 PER------FT------L--------------------YSPKNLRQ------AWNKLSYVNHAEDLASKLLQCFPKNRLS  281 (303)
T ss_pred             ccc------cc------c--------------------cCCccHHH------HhhccCCChHHHHHHHHHhccCchhccC
Confidence            000      00      0                    00000000      0001123467899999999999999999


Q ss_pred             HHHHHcCCCCCCccc
Q 025467          236 AREALRHPFFTRDHL  250 (252)
Q Consensus       236 a~e~l~hpwf~~~~~  250 (252)
                      ++|+|+||||+..+.
T Consensus       282 ~~~~l~h~~f~~~~~  296 (303)
T cd07869         282 AQAALSHEYFSDLPP  296 (303)
T ss_pred             HHHHhcCcccccCCh
Confidence            999999999998765

Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an

>KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.97  E-value=1.9e-32  Score=233.66  Aligned_cols=143  Identities=27%  Similarity=0.451  Sum_probs=120.7

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccC---CCCCccccCC
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYER---PDQNYIVSTR   77 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~---~~~~~~~~t~   77 (252)
                      ||+|||++||||||||.+|||+                           +..+++||+|||+++...   ....+.+||+
T Consensus       480 ~L~fLH~~~IIYRDlKLdNiLL---------------------------D~eGh~kiADFGlcKe~m~~g~~TsTfCGTp  532 (694)
T KOG0694|consen  480 GLQFLHENGIIYRDLKLDNLLL---------------------------DTEGHVKIADFGLCKEGMGQGDRTSTFCGTP  532 (694)
T ss_pred             HHHHHHhcCceeeecchhheEE---------------------------cccCcEEecccccccccCCCCCccccccCCh
Confidence            6999999999999999999999                           556678888888886432   2234469999


Q ss_pred             CcccchhhhcCCCCccchhHhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHHHHHHhhcCCCCCCc
Q 025467           78 HYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPE  157 (252)
Q Consensus        78 ~y~aPE~l~~~~~~~~~Diws~G~~l~~l~~g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~  157 (252)
                      -|+|||++.+..|+.+.|+|||||+||+|+.|..||.++++.+++..|...-...|                        
T Consensus       533 ey~aPEil~e~~Yt~aVDWW~lGVLlyeML~Gq~PF~gddEee~FdsI~~d~~~yP------------------------  588 (694)
T KOG0694|consen  533 EFLAPEVLTEQSYTRAVDWWGLGVLLYEMLVGESPFPGDDEEEVFDSIVNDEVRYP------------------------  588 (694)
T ss_pred             hhcChhhhccCcccchhhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHhcCCCCCC------------------------
Confidence            99999999999999999999999999999999999999999888877654322221                        


Q ss_pred             cccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCCCCC--
Q 025467          158 GAASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLT--  235 (252)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~t--  235 (252)
                                                                            .-.+.++.++|+++|..||++|..  
T Consensus       589 ------------------------------------------------------~~ls~ea~~il~~ll~k~p~kRLG~~  614 (694)
T KOG0694|consen  589 ------------------------------------------------------RFLSKEAIAIMRRLLRKNPEKRLGSG  614 (694)
T ss_pred             ------------------------------------------------------CcccHHHHHHHHHHhccCcccccCCC
Confidence                                                                  224568999999999999999996  


Q ss_pred             ---HHHHHcCCCCCCc
Q 025467          236 ---AREALRHPFFTRD  248 (252)
Q Consensus       236 ---a~e~l~hpwf~~~  248 (252)
                         +++|.+||||+..
T Consensus       615 e~d~~~i~~hpFFr~i  630 (694)
T KOG0694|consen  615 ERDAEDIKKHPFFRSI  630 (694)
T ss_pred             CCCchhhhhCCccccC
Confidence               5899999999864

>PHA03212 serine/threonine kinase US3; Provisional

Probab=99.97  E-value=4.3e-32  Score=230.69  Aligned_cols=176  Identities=20%  Similarity=0.295  Sum_probs=119.9

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCC----CCCccccC
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERP----DQNYIVST   76 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~----~~~~~~~t   76 (252)
                      ||+|||++||+||||||+|||++.                           .+.++|+|||++.....    ......||
T Consensus       194 aL~ylH~~~IvHrDiKP~NIll~~---------------------------~~~vkL~DFG~a~~~~~~~~~~~~~~~gt  246 (391)
T PHA03212        194 AIQYLHENRIIHRDIKAENIFINH---------------------------PGDVCLGDFGAACFPVDINANKYYGWAGT  246 (391)
T ss_pred             HHHHHHhCCcccCCCChHhEEEcC---------------------------CCCEEEEeCCcccccccccccccccccCc
Confidence            689999999999999999999954                           34567777777653221    11224789


Q ss_pred             CCcccchhhhcCCCCccchhHhHHHHHHHHHhCCCCCCCC-------ChHHHHHHHHHHhCCCchHHHHHhhHHHHHHh-
Q 025467           77 RHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTH-------ENLEHLAMMERVLGPLPQHMLKRVDRHAEKYV-  148 (252)
Q Consensus        77 ~~y~aPE~l~~~~~~~~~Diws~G~~l~~l~~g~~pf~~~-------~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~-  148 (252)
                      +.|+|||++.+..++.++||||+||++|++++|..||...       +...++..+....|..|.++............ 
T Consensus       247 ~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~p~~~~~~~~~~~~~~~~l~~i~~~~g~~p~~~~~~~~~~~~~~~~  326 (391)
T PHA03212        247 IATNAPELLARDPYGPAVDIWSAGIVLFEMATCHDSLFEKDGLDGDCDSDRQIKLIIRRSGTHPNEFPIDAQANLDEIYI  326 (391)
T ss_pred             cCCCChhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCcCCcccccccCchhHHHHHHHHHhcCChhhcCcchhHHHHHHHH
Confidence            9999999999888999999999999999999999776432       23456777777778766543211110000000 


Q ss_pred             h--cCCCCCCccccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhc
Q 025467          149 R--RGRLDWPEGAASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLL  226 (252)
Q Consensus       149 ~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L  226 (252)
                      .  ......+..                                              ..........+.++.+||.+||
T Consensus       327 ~~~~~~~~~~~~----------------------------------------------~~~~~~~~~~~~~l~~Li~~mL  360 (391)
T PHA03212        327 GLAKKSSRKPGS----------------------------------------------RPLWTNLYELPIDLEYLICKML  360 (391)
T ss_pred             HHHhccCCCCCC----------------------------------------------CCCHHHHhhhhhhHHHHHHHHh
Confidence            0  000000000                                              0000001124557899999999


Q ss_pred             cCCCCCCCCHHHHHcCCCCCCcc
Q 025467          227 RYDPTDRLTAREALRHPFFTRDH  249 (252)
Q Consensus       227 ~~dP~~R~ta~e~l~hpwf~~~~  249 (252)
                      ++||++||||+|+|+||||+..+
T Consensus       361 ~~dP~~Rpta~elL~hp~f~~~~  383 (391)
T PHA03212        361 AFDAHHRPSAEALLDFAAFQDIP  383 (391)
T ss_pred             cCChhhCCCHHHHhcChhhccCC
Confidence            99999999999999999998754

>KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.97  E-value=3.2e-32  Score=222.08  Aligned_cols=163  Identities=27%  Similarity=0.418  Sum_probs=118.0

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCCCccccCCCcc
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYR   80 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~~~~~~t~~y~   80 (252)
                      ||.|||++|.||||||+.|||++.+|.++++|||.+..                  +.|-|. +..... .+.+||+.||
T Consensus       138 aL~YLH~~G~IHRdvKAgnILi~~dG~VkLadFgvsa~------------------l~~~G~-R~~~rf-~tfvgtp~wm  197 (516)
T KOG0582|consen  138 ALDYLHQNGHIHRDVKAGNILIDSDGTVKLADFGVSAS------------------LFDSGD-RQVTRF-NTFVGTPCWM  197 (516)
T ss_pred             HHHHHHhcCceecccccccEEEcCCCcEEEcCceeeee------------------ecccCc-eeeEee-ccccCccccc
Confidence            68999999999999999999998888888888775422                  222221 111111 3458999999


Q ss_pred             cchhhhc--CCCCccchhHhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHHHHHHhhcCCCCCCcc
Q 025467           81 APEVILG--LGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEG  158 (252)
Q Consensus        81 aPE~l~~--~~~~~~~Diws~G~~l~~l~~g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~  158 (252)
                      |||++..  .+|+.++||||||++..|+.+|..||........+  +..+.+.+|......                   
T Consensus       198 APEvl~q~~~GYdfKaDIwSfGITA~ELA~G~aPf~k~pPmkvL--l~tLqn~pp~~~t~~-------------------  256 (516)
T KOG0582|consen  198 APEVLMQQLHGYDFKADIWSFGITACELAHGHAPFSKYPPMKVL--LLTLQNDPPTLLTSG-------------------  256 (516)
T ss_pred             ChHHhhhcccCccchhhhhhhhHHHHHHhcCCCCcccCChHHHH--HHHhcCCCCCccccc-------------------
Confidence            9999654  37999999999999999999999999866554443  233444444211000                   


Q ss_pred             ccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCCCCCHHH
Q 025467          159 AASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTARE  238 (252)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~ta~e  238 (252)
                                                                     .........+..|+.++..||+.||.+||||++
T Consensus       257 -----------------------------------------------~~~d~~k~~~ksf~e~i~~CL~kDP~kRptAsk  289 (516)
T KOG0582|consen  257 -----------------------------------------------LDKDEDKKFSKSFREMIALCLVKDPSKRPTASK  289 (516)
T ss_pred             -----------------------------------------------CChHHhhhhcHHHHHHHHHHhhcCcccCCCHHH
Confidence                                                           000111233458999999999999999999999


Q ss_pred             HHcCCCCCCcccc
Q 025467          239 ALRHPFFTRDHLR  251 (252)
Q Consensus       239 ~l~hpwf~~~~~~  251 (252)
                      +|+|+||+..+.+
T Consensus       290 Llkh~FFk~~k~~  302 (516)
T KOG0582|consen  290 LLKHAFFKKAKSK  302 (516)
T ss_pred             HhccHHHhhccch
Confidence            9999999987653

>KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=99.97  E-value=1.3e-32  Score=222.41  Aligned_cols=148  Identities=30%  Similarity=0.484  Sum_probs=107.8

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCC------CCCccc
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERP------DQNYIV   74 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~------~~~~~~   74 (252)
                      ||+|||++|||||||||+|||+...                          ++.+||+|||.+.....      ......
T Consensus       129 GL~ylHs~g~vH~DiK~~NiLl~~~--------------------------~~~~KlaDFG~a~~~~~~~~~~~~~~~~~  182 (313)
T KOG0198|consen  129 GLAYLHSKGIVHCDIKPANILLDPS--------------------------NGDVKLADFGLAKKLESKGTKSDSELSVQ  182 (313)
T ss_pred             HHHHHHhCCEeccCcccceEEEeCC--------------------------CCeEEeccCcccccccccccccccccccc
Confidence            5899999999999999999999541                          34577777776654432      112357


Q ss_pred             cCCCcccchhhhcCC-CCccchhHhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHHHHHHhhcCCC
Q 025467           75 STRHYRAPEVILGLG-WTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRL  153 (252)
Q Consensus        75 ~t~~y~aPE~l~~~~-~~~~~Diws~G~~l~~l~~g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~  153 (252)
                      ||+.|||||++..+. ...++||||+||++.+|+||..||...  .+....+..+..                   .+  
T Consensus       183 Gtp~~maPEvi~~g~~~~~~sDiWSlGCtVvEM~Tg~~PW~~~--~~~~~~~~~ig~-------------------~~--  239 (313)
T KOG0198|consen  183 GTPNYMAPEVIRNGEVARRESDIWSLGCTVVEMLTGKPPWSEF--FEEAEALLLIGR-------------------ED--  239 (313)
T ss_pred             CCccccCchhhcCCCcCCccchhhhcCCEEEeccCCCCcchhh--cchHHHHHHHhc-------------------cC--
Confidence            999999999998632 335999999999999999999998752  111111111110                   00  


Q ss_pred             CCCccccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCCC
Q 025467          154 DWPEGAASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDR  233 (252)
Q Consensus       154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R  233 (252)
                      ..                                                    +......+.++++||.+||.+||++|
T Consensus       240 ~~----------------------------------------------------P~ip~~ls~~a~~Fl~~C~~~~p~~R  267 (313)
T KOG0198|consen  240 SL----------------------------------------------------PEIPDSLSDEAKDFLRKCFKRDPEKR  267 (313)
T ss_pred             CC----------------------------------------------------CCCCcccCHHHHHHHHHHhhcCcccC
Confidence            00                                                    01123456799999999999999999


Q ss_pred             CCHHHHHcCCCCCCcc
Q 025467          234 LTAREALRHPFFTRDH  249 (252)
Q Consensus       234 ~ta~e~l~hpwf~~~~  249 (252)
                      |||+++|+|||.+...
T Consensus       268 pta~eLL~hpf~~~~~  283 (313)
T KOG0198|consen  268 PTAEELLEHPFLKQNS  283 (313)
T ss_pred             cCHHHHhhChhhhccc
Confidence            9999999999998754

>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase

Probab=99.97  E-value=2.1e-31  Score=220.07  Aligned_cols=175  Identities=27%  Similarity=0.499  Sum_probs=126.9

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCC---CCccccCC
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD---QNYIVSTR   77 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~---~~~~~~t~   77 (252)
                      ||+|||++||+||||||+||+++.                           .+.++|+|||.+......   .....++.
T Consensus       116 aL~~lH~~~ivH~dlkp~Nill~~---------------------------~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~  168 (309)
T cd07872         116 GLAYCHRRKVLHRDLKPQNLLINE---------------------------RGELKLADFGLARAKSVPTKTYSNEVVTL  168 (309)
T ss_pred             HHHHHHHCCeecCCCCHHHEEECC---------------------------CCCEEECccccceecCCCccccccccccc
Confidence            689999999999999999999954                           345677777766532221   11235688


Q ss_pred             CcccchhhhcC-CCCccchhHhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHHHHHHhhcCCCCCC
Q 025467           78 HYRAPEVILGL-GWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWP  156 (252)
Q Consensus        78 ~y~aPE~l~~~-~~~~~~Diws~G~~l~~l~~g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~  156 (252)
                      .|+|||.+.+. .++.++||||+||++|+|++|..||.+.+..+.+..+....+.++...+..+..........    .+
T Consensus       169 ~y~aPE~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~  244 (309)
T cd07872         169 WYRPPDVLLGSSEYSTQIDMWGVGCIFFEMASGRPLFPGSTVEDELHLIFRLLGTPTEETWPGISSNDEFKNYN----FP  244 (309)
T ss_pred             cccCCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhhcchhhhhhhh----cC
Confidence            99999998764 57899999999999999999999999888888888888888887776554433211111000    00


Q ss_pred             ccccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCCCCCH
Q 025467          157 EGAASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTA  236 (252)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~ta  236 (252)
                      ...                                            ...........+.++++||.+||++||.+|||+
T Consensus       245 ~~~--------------------------------------------~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~  280 (309)
T cd07872         245 KYK--------------------------------------------PQPLINHAPRLDTEGIELLTKFLQYESKKRISA  280 (309)
T ss_pred             ccC--------------------------------------------CCchhhhccCCCHHHHHHHHHhccCChhhCCCH
Confidence            000                                            000001113456788999999999999999999


Q ss_pred             HHHHcCCCCCCccc
Q 025467          237 REALRHPFFTRDHL  250 (252)
Q Consensus       237 ~e~l~hpwf~~~~~  250 (252)
                      +|+++||||+....
T Consensus       281 ~e~l~h~~~~~~~~  294 (309)
T cd07872         281 EEAMKHAYFRSLGT  294 (309)
T ss_pred             HHHhcChhhhhccc
Confidence            99999999997654

Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play

>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6

Probab=99.97  E-value=1.5e-31  Score=221.57  Aligned_cols=182  Identities=29%  Similarity=0.499  Sum_probs=118.8

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCC------CCccc
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD------QNYIV   74 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~------~~~~~   74 (252)
                      ||+|||++||+||||||+|||+...+                       ...+.++|+|||++......      .....
T Consensus       120 aL~~lH~~~ivH~Dlkp~Nil~~~~~-----------------------~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~  176 (317)
T cd07867         120 GIHYLHANWVLHRDLKPANILVMGEG-----------------------PERGRVKIADMGFARLFNSPLKPLADLDPVV  176 (317)
T ss_pred             HHHHHHhCCEEcCCCCHHHEEEccCC-----------------------CCCCcEEEeeccceeccCCCcccccccCcce
Confidence            68999999999999999999995432                       23456788888887643321      12246


Q ss_pred             cCCCcccchhhhcC-CCCccchhHhHHHHHHHHHhCCCCCCCCCh---------HHHHHHHHHHhCCCchHHHHHhhHHH
Q 025467           75 STRHYRAPEVILGL-GWTYPCDIWSVGCILVELCTGEALFQTHEN---------LEHLAMMERVLGPLPQHMLKRVDRHA  144 (252)
Q Consensus        75 ~t~~y~aPE~l~~~-~~~~~~Diws~G~~l~~l~~g~~pf~~~~~---------~~~~~~~~~~~g~~p~~~~~~~~~~~  144 (252)
                      +|..|+|||++.+. .++.++||||+||++|+|++|.+||....+         ...+..+...+|.+....+.......
T Consensus       177 ~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  256 (317)
T cd07867         177 VTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPFHHDQLDRIFSVMGFPADKDWEDIRKMP  256 (317)
T ss_pred             ecccccCcHHhcCCCccCcHHHHHhHHHHHHHHHhCCCCcccccccccccccccHHHHHHHHHhcCCCChhhhhhhhhcc
Confidence            78899999999764 478999999999999999999999975432         24455666666655543332221110


Q ss_pred             HHHhhcCCCCCCccccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHH
Q 025467          145 EKYVRRGRLDWPEGAASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQG  224 (252)
Q Consensus       145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~  224 (252)
                      .+.........                ...                   .    ... ............+..+.+|+.+
T Consensus       257 ~~~~~~~~~~~----------------~~~-------------------~----~~~-~~~~~~~~~~~~~~~~~~ll~~  296 (317)
T cd07867         257 EYPTLQKDFRR----------------TTY-------------------A----NSS-LIKYMEKHKVKPDSKVFLLLQK  296 (317)
T ss_pred             cchhhhhhhcc----------------ccc-------------------C----Cch-hhhhhhcccCCCChHHHHHHHH
Confidence            00000000000                000                   0    000 0000111123345679999999


Q ss_pred             hccCCCCCCCCHHHHHcCCCC
Q 025467          225 LLRYDPTDRLTAREALRHPFF  245 (252)
Q Consensus       225 ~L~~dP~~R~ta~e~l~hpwf  245 (252)
                      ||+.||.+||||+|+|+||||
T Consensus       297 ~l~~dP~~R~t~~e~l~hp~f  317 (317)
T cd07867         297 LLTMDPTKRITSEQALQDPYF  317 (317)
T ss_pred             HhccCcccccCHHHHhcCCCC
Confidence            999999999999999999998

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as

>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4

Probab=99.97  E-value=1.7e-31  Score=218.22  Aligned_cols=167  Identities=34%  Similarity=0.598  Sum_probs=119.3

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCC--CCccccCCC
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD--QNYIVSTRH   78 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~--~~~~~~t~~   78 (252)
                      ||+|||++||+||||||+||+++.+                           +.++|+|||.+......  .....++..
T Consensus       120 al~~lH~~~ivH~dikp~Nili~~~---------------------------~~~kl~dfg~~~~~~~~~~~~~~~~~~~  172 (288)
T cd07863         120 GLDFLHANCIVHRDLKPENILVTSG---------------------------GQVKLADFGLARIYSCQMALTPVVVTLW  172 (288)
T ss_pred             HHHHHHhCCeecCCCCHHHEEECCC---------------------------CCEEECccCccccccCcccCCCcccccc
Confidence            6899999999999999999999544                           44666777766543222  122367889


Q ss_pred             cccchhhhcCCCCccchhHhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHHHHHHhhcCCCCCCcc
Q 025467           79 YRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEG  158 (252)
Q Consensus        79 y~aPE~l~~~~~~~~~Diws~G~~l~~l~~g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~  158 (252)
                      |+|||++.+..++.++||||+||++|+|++|.+||.+....+.+..+....+.+....+...            ...+..
T Consensus       173 y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~  240 (288)
T cd07863         173 YRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWPRD------------VTLPRG  240 (288)
T ss_pred             ccCchHhhCCCCCCcchhhhHHHHHHHHHhCCcCcCCCCHHHHHHHHHHHhCCCChhhCccc------------cccccc
Confidence            99999999888999999999999999999999999888877777777777665443211100            000000


Q ss_pred             ccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCCCCCHHH
Q 025467          159 AASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTARE  238 (252)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~ta~e  238 (252)
                      .              .                 ...        ............+..+.+|+.+||+.||++|||+.+
T Consensus       241 ~--------------~-----------------~~~--------~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~~  281 (288)
T cd07863         241 A--------------F-----------------SPR--------GPRPVQSVVPEIEESGAQLLLEMLTFNPHKRISAFR  281 (288)
T ss_pred             c--------------c-----------------CCC--------CCCchHHhCcCcCHHHHHHHHHHhccCcccCCCHHH
Confidence            0              0                 000        000001112345678899999999999999999999


Q ss_pred             HHcCCCC
Q 025467          239 ALRHPFF  245 (252)
Q Consensus       239 ~l~hpwf  245 (252)
                      ++.||||
T Consensus       282 ~l~hp~f  288 (288)
T cd07863         282 ALQHPFF  288 (288)
T ss_pred             HhcCCCC
Confidence            9999998

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou

>KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]

Probab=99.97  E-value=1.4e-31  Score=224.00  Aligned_cols=151  Identities=36%  Similarity=0.614  Sum_probs=123.3

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCC--CCccccCCC
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD--QNYIVSTRH   78 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~--~~~~~~t~~   78 (252)
                      |++|||+.||+||||||+|+|+....                       .....++++|||++......  ....+||+.
T Consensus       147 av~~lH~~gvvHrDlKpEN~L~~~~~-----------------------~~~~~ik~~DFGla~~~~~~~~~~~~~Gtp~  203 (382)
T KOG0032|consen  147 AVKYLHSLGVVHRDLKPENLLLASKD-----------------------EGSGRIKLIDFGLAKFIKPGERLHTIVGTPE  203 (382)
T ss_pred             HHHHHHhCCceeccCCHHHeeecccc-----------------------CCCCcEEEeeCCCceEccCCceEeeecCCcc
Confidence            58999999999999999999996542                       22357899999999876663  234699999


Q ss_pred             cccchhhhcCCCCccchhHhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHHHHHHhhcCCCCCCcc
Q 025467           79 YRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEG  158 (252)
Q Consensus        79 y~aPE~l~~~~~~~~~Diws~G~~l~~l~~g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~  158 (252)
                      |+|||++...+|+..+||||+||++|.|++|.+||.+.+.......+..                       +.+.+.  
T Consensus       204 y~APEvl~~~~y~~~~DiWS~Gvi~yiLL~G~~PF~~~~~~~~~~~i~~-----------------------~~~~f~--  258 (382)
T KOG0032|consen  204 YVAPEVLGGRPYGDEVDVWSIGVILYILLSGVPPFWGETEFEIFLAILR-----------------------GDFDFT--  258 (382)
T ss_pred             ccCchhhcCCCCCcccchhHHHHHHHHHhhCCCCCcCCChhHHHHHHHc-----------------------CCCCCC--
Confidence            9999999999999999999999999999999999998776555442222                       111111  


Q ss_pred             ccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCCCCCHHH
Q 025467          159 AASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTARE  238 (252)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~ta~e  238 (252)
                                                                       ...|+..+..+++|+++||..||.+|+||.+
T Consensus       259 -------------------------------------------------~~~w~~is~~akd~i~~ll~~dp~~R~ta~~  289 (382)
T KOG0032|consen  259 -------------------------------------------------SEPWDDISESAKDFIRKLLEFDPRKRLTAAQ  289 (382)
T ss_pred             -------------------------------------------------CCCccccCHHHHHHHHHhcccCcccCCCHHH
Confidence                                                             1234667889999999999999999999999


Q ss_pred             HHcCCCCCCc
Q 025467          239 ALRHPFFTRD  248 (252)
Q Consensus       239 ~l~hpwf~~~  248 (252)
                      +|+|||+++.
T Consensus       290 ~L~HpWi~~~  299 (382)
T KOG0032|consen  290 ALQHPWIKSI  299 (382)
T ss_pred             HhcCccccCC
Confidence            9999999875

>KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=99.97  E-value=1.4e-31  Score=219.78  Aligned_cols=153  Identities=31%  Similarity=0.479  Sum_probs=111.9

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCCCccccCCCcc
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYR   80 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~~~~~~t~~y~   80 (252)
                      +|+|||.+|||||||||+|+|++.++.+||+|||.+-..+.....                   .........+||+.|+
T Consensus       222 GLEYLH~QgiiHRDIKPsNLLl~~~g~VKIsDFGVs~~~~~~~~~-------------------~~d~~L~~tvGTPAF~  282 (576)
T KOG0585|consen  222 GLEYLHYQGIIHRDIKPSNLLLSSDGTVKISDFGVSNEFPQGSDE-------------------GSDDQLSRTVGTPAFF  282 (576)
T ss_pred             HHHHHHhcCeeccccchhheEEcCCCcEEeeccceeeecccCCcc-------------------ccHHHHhhcCCCcccc
Confidence            689999999999999999999977666555555544222111000                   0000001148999999


Q ss_pred             cchhhhcC---CC-CccchhHhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHHHHHHhhcCCCCCC
Q 025467           81 APEVILGL---GW-TYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWP  156 (252)
Q Consensus        81 aPE~l~~~---~~-~~~~Diws~G~~l~~l~~g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~  156 (252)
                      |||.+.++   .+ +.+.||||+||+||.++.|+.||-+....+....|+..                       .+.+|
T Consensus       283 APE~c~~~~~~~~~g~a~DiWalGVTLYCllfG~~PF~~~~~~~l~~KIvn~-----------------------pL~fP  339 (576)
T KOG0585|consen  283 APELCSGGNSFSYSGFALDIWALGVTLYCLLFGQLPFFDDFELELFDKIVND-----------------------PLEFP  339 (576)
T ss_pred             chHhhcCCCCccccchhhhhhhhhhhHHHhhhccCCcccchHHHHHHHHhcC-----------------------cccCC
Confidence            99999873   23 57899999999999999999999876665555444331                       12222


Q ss_pred             ccccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCCCCCH
Q 025467          157 EGAASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTA  236 (252)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~ta  236 (252)
                      ..                                                     .++.+.++|||++||+.||++|+|.
T Consensus       340 ~~-----------------------------------------------------pe~~e~~kDli~~lL~KdP~~Ri~l  366 (576)
T KOG0585|consen  340 EN-----------------------------------------------------PEINEDLKDLIKRLLEKDPEQRITL  366 (576)
T ss_pred             Cc-----------------------------------------------------ccccHHHHHHHHHHhhcChhheeeh
Confidence            21                                                     2456789999999999999999999


Q ss_pred             HHHHcCCCCCCc
Q 025467          237 REALRHPFFTRD  248 (252)
Q Consensus       237 ~e~l~hpwf~~~  248 (252)
                      .++..|||....
T Consensus       367 ~~ik~Hpwvt~~  378 (576)
T KOG0585|consen  367 PDIKLHPWVTRD  378 (576)
T ss_pred             hhheecceeccC
Confidence            999999999875

>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases

Probab=99.97  E-value=3.5e-31  Score=216.99  Aligned_cols=143  Identities=31%  Similarity=0.465  Sum_probs=112.7

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCCCccccCCCcc
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYR   80 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~~~~~~t~~y~   80 (252)
                      ||+|||++||+||||||+|||++                           ..+.++|+|||.+...........|++.|+
T Consensus       113 ~l~~lH~~~i~H~dlkp~NIli~---------------------------~~~~~kl~Dfg~~~~~~~~~~~~~gt~~y~  165 (291)
T cd05612         113 ALEYLHSKEIVYRDLKPENILLD---------------------------KEGHIKLTDFGFAKKLRDRTWTLCGTPEYL  165 (291)
T ss_pred             HHHHHHHCCeeecCCCHHHeEEC---------------------------CCCCEEEEecCcchhccCCcccccCChhhc
Confidence            68999999999999999999994                           344578888888765544434457899999


Q ss_pred             cchhhhcCCCCccchhHhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHHHHHHhhcCCCCCCcccc
Q 025467           81 APEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAA  160 (252)
Q Consensus        81 aPE~l~~~~~~~~~Diws~G~~l~~l~~g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (252)
                      |||++.+..++.++||||+||++|+|++|..||.+.+.......+..                       +...++    
T Consensus       166 aPE~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~~~i~~-----------------------~~~~~~----  218 (291)
T cd05612         166 APEVIQSKGHNKAVDWWALGILIYEMLVGYPPFFDDNPFGIYEKILA-----------------------GKLEFP----  218 (291)
T ss_pred             CHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHh-----------------------CCcCCC----
Confidence            99999988899999999999999999999999987655443332211                       011111    


Q ss_pred             chhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCCCCC-----
Q 025467          161 SRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLT-----  235 (252)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~t-----  235 (252)
                                                                         ...+..+.+||++||+.||.+|++     
T Consensus       219 ---------------------------------------------------~~~~~~~~~li~~~l~~dp~~R~~~~~~~  247 (291)
T cd05612         219 ---------------------------------------------------RHLDLYAKDLIKKLLVVDRTRRLGNMKNG  247 (291)
T ss_pred             ---------------------------------------------------ccCCHHHHHHHHHHcCCCHHHccCCccCC
Confidence                                                               122457899999999999999995     


Q ss_pred             HHHHHcCCCCCCc
Q 025467          236 AREALRHPFFTRD  248 (252)
Q Consensus       236 a~e~l~hpwf~~~  248 (252)
                      ++++++||||+..
T Consensus       248 ~~~~l~h~~~~~~  260 (291)
T cd05612         248 ADDVKNHRWFKSV  260 (291)
T ss_pred             HHHHhcCccccCC
Confidence            9999999999864

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt

>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B

Probab=99.97  E-value=2.5e-31  Score=221.01  Aligned_cols=143  Identities=27%  Similarity=0.481  Sum_probs=110.0

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCC---CCCccccCC
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERP---DQNYIVSTR   77 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~---~~~~~~~t~   77 (252)
                      ||+|||++||+||||||+|||++.                           ++.++|+|||+++....   .....+||+
T Consensus       107 ~L~~lH~~~ivHrDlkp~NIll~~---------------------------~~~~kl~DfG~a~~~~~~~~~~~~~~gt~  159 (323)
T cd05571         107 ALGYLHSCDVVYRDLKLENLMLDK---------------------------DGHIKITDFGLCKEGISDGATMKTFCGTP  159 (323)
T ss_pred             HHHHHHhCCeEeCCCCHHHEEECC---------------------------CCCEEEeeCCCCcccccCCCcccceecCc
Confidence            689999999999999999999944                           44577777777654211   122346899


Q ss_pred             CcccchhhhcCCCCccchhHhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHHHHHHhhcCCCCCCc
Q 025467           78 HYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPE  157 (252)
Q Consensus        78 ~y~aPE~l~~~~~~~~~Diws~G~~l~~l~~g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~  157 (252)
                      .|+|||++.+..++.++||||+||++|+|++|..||.+.+.......+..                       +....+ 
T Consensus       160 ~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~~~~~~~~-----------------------~~~~~p-  215 (323)
T cd05571         160 EYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILM-----------------------EEIRFP-  215 (323)
T ss_pred             cccChhhhcCCCCCccccCcccchhhhhhhcCCCCCCCCCHHHHHHHHHc-----------------------CCCCCC-
Confidence            99999999988899999999999999999999999976554332222111                       001011 


Q ss_pred             cccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCCCC---
Q 025467          158 GAASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRL---  234 (252)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~---  234 (252)
                                                                            ...+.++.+||.+||+.||++||   
T Consensus       216 ------------------------------------------------------~~~~~~~~~li~~~L~~dP~~R~~~~  241 (323)
T cd05571         216 ------------------------------------------------------RTLSPEAKSLLAGLLKKDPKQRLGGG  241 (323)
T ss_pred             ------------------------------------------------------CCCCHHHHHHHHHHccCCHHHcCCCC
Confidence                                                                  12356889999999999999999   


Q ss_pred             --CHHHHHcCCCCCCc
Q 025467          235 --TAREALRHPFFTRD  248 (252)
Q Consensus       235 --ta~e~l~hpwf~~~  248 (252)
                        ++.++++||||...
T Consensus       242 ~~~~~~ll~h~~f~~~  257 (323)
T cd05571         242 PEDAKEIMEHRFFASI  257 (323)
T ss_pred             CCCHHHHHcCCCcCCC
Confidence              89999999999874

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be

>PHA03207 serine/threonine kinase US3; Provisional

Probab=99.97  E-value=6.4e-31  Score=223.98  Aligned_cols=179  Identities=21%  Similarity=0.298  Sum_probs=118.0

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCC-----Ccccc
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ-----NYIVS   75 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~-----~~~~~   75 (252)
                      ||+|||++||+||||||+|||++.++                           .++|+|||++.......     ....|
T Consensus       197 aL~~LH~~givHrDlkp~Nill~~~~---------------------------~~~l~DfG~a~~~~~~~~~~~~~~~~g  249 (392)
T PHA03207        197 ALAYLHGRGIIHRDVKTENIFLDEPE---------------------------NAVLGDFGAACKLDAHPDTPQCYGWSG  249 (392)
T ss_pred             HHHHHHHCCccccCCCHHHEEEcCCC---------------------------CEEEccCccccccCccccccccccccc
Confidence            68999999999999999999995544                           45666666654322211     12468


Q ss_pred             CCCcccchhhhcCCCCccchhHhHHHHHHHHHhCCCCCCCCC---hHHHHHHHHHHhCCCchHHHHHhhHHHHHHhhcCC
Q 025467           76 TRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHE---NLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGR  152 (252)
Q Consensus        76 t~~y~aPE~l~~~~~~~~~Diws~G~~l~~l~~g~~pf~~~~---~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~  152 (252)
                      |..|+|||++.+..++.++||||+||++|+|++|..||.+..   ....+..+.+..+..|.++................
T Consensus       250 t~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~  329 (392)
T PHA03207        250 TLETNSPELLALDPYCAKTDIWSAGLVLFEMSVKNVTLFGKQVKSSSSQLRSIIRCMQVHPLEFPQNGSTNLCKHFKQYA  329 (392)
T ss_pred             ccCccCHhHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCCCCcHHHHHHHHHHhccCccccCCccchhHHHHHHhhc
Confidence            999999999998889999999999999999999999997653   34455556666555443221110000000000000


Q ss_pred             CCCCccccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCC
Q 025467          153 LDWPEGAASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTD  232 (252)
Q Consensus       153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~  232 (252)
                      ....               +....                           +..  ......+.++.+||++||++||.+
T Consensus       330 ~~~~---------------~~~~~---------------------------~~~--~~~~~~~~~~~~li~~ml~~dp~~  365 (392)
T PHA03207        330 IVLR---------------PPYTI---------------------------PPV--IRKYGMHMDVEYLIAKMLTFDQEF  365 (392)
T ss_pred             cccc---------------CCccc---------------------------cch--hhccCcchhHHHHHHHHhccChhh
Confidence            0000               00000                           000  000123457889999999999999


Q ss_pred             CCCHHHHHcCCCCCCccc
Q 025467          233 RLTAREALRHPFFTRDHL  250 (252)
Q Consensus       233 R~ta~e~l~hpwf~~~~~  250 (252)
                      ||||.++|.||||+..+.
T Consensus       366 Rpsa~e~l~~p~f~~~~~  383 (392)
T PHA03207        366 RPSAQDILSLPLFTKEPI  383 (392)
T ss_pred             CCCHHHHhhCchhhccch
Confidence            999999999999998764

>PTZ00263 protein kinase A catalytic subunit; Provisional

Probab=99.97  E-value=3e-31  Score=221.06  Aligned_cols=143  Identities=33%  Similarity=0.526  Sum_probs=112.1

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCCCccccCCCcc
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYR   80 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~~~~~~t~~y~   80 (252)
                      ||+|||++||+||||||+|||++                           .++.++|+|||.+...........||+.|+
T Consensus       130 aL~~LH~~~ivH~dlkp~NIll~---------------------------~~~~~kl~Dfg~~~~~~~~~~~~~gt~~y~  182 (329)
T PTZ00263        130 AFEYLHSKDIIYRDLKPENLLLD---------------------------NKGHVKVTDFGFAKKVPDRTFTLCGTPEYL  182 (329)
T ss_pred             HHHHHHHCCeeecCCCHHHEEEC---------------------------CCCCEEEeeccCceEcCCCcceecCChhhc
Confidence            68999999999999999999994                           445678888888765544444457899999


Q ss_pred             cchhhhcCCCCccchhHhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHHHHHHhhcCCCCCCcccc
Q 025467           81 APEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAA  160 (252)
Q Consensus        81 aPE~l~~~~~~~~~Diws~G~~l~~l~~g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (252)
                      |||++.+..++.++||||+||++|+|++|..||.+.+.......+..                       +.+..+    
T Consensus       183 aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~i~~-----------------------~~~~~p----  235 (329)
T PTZ00263        183 APEVIQSKGHGKAVDWWTMGVLLYEFIAGYPPFFDDTPFRIYEKILA-----------------------GRLKFP----  235 (329)
T ss_pred             CHHHHcCCCCCCcceeechHHHHHHHHcCCCCCCCCCHHHHHHHHhc-----------------------CCcCCC----
Confidence            99999988899999999999999999999999976554333222111                       111111    


Q ss_pred             chhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCCCCC-----
Q 025467          161 SRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLT-----  235 (252)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~t-----  235 (252)
                                                                         ...+..+.+|+.+||+.||.+|++     
T Consensus       236 ---------------------------------------------------~~~~~~~~~li~~~L~~dP~~R~~~~~~~  264 (329)
T PTZ00263        236 ---------------------------------------------------NWFDGRARDLVKGLLQTDHTKRLGTLKGG  264 (329)
T ss_pred             ---------------------------------------------------CCCCHHHHHHHHHHhhcCHHHcCCCCCCC
Confidence                                                               113457899999999999999997     


Q ss_pred             HHHHHcCCCCCCc
Q 025467          236 AREALRHPFFTRD  248 (252)
Q Consensus       236 a~e~l~hpwf~~~  248 (252)
                      +++++.||||++.
T Consensus       265 ~~~ll~hp~f~~~  277 (329)
T PTZ00263        265 VADVKNHPYFHGA  277 (329)
T ss_pred             HHHHhcCCccCCC
Confidence            7999999999874

>KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning]

Probab=99.97  E-value=5.1e-31  Score=201.26  Aligned_cols=180  Identities=28%  Similarity=0.503  Sum_probs=132.9

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCC-------Ccc
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ-------NYI   73 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~-------~~~   73 (252)
                      +|.|+|++.|+|||+|+.|+|++.+                           +.++|+|||+++..+...       +..
T Consensus       136 GL~~iHr~kilHRDmKaaNvLIt~d---------------------------gilklADFGlar~fs~~~n~~kprytnr  188 (376)
T KOG0669|consen  136 GLYYIHRNKILHRDMKAANVLITKD---------------------------GILKLADFGLARAFSTSKNVVKPRYTNR  188 (376)
T ss_pred             HHHHHHHhhHHhhcccHhhEEEcCC---------------------------ceEEeeccccccceecccccCCCCcccc
Confidence            5889999999999999999999554                           456666776664432211       223


Q ss_pred             ccCCCcccchhhhcC-CCCccchhHhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHHHHHHhhcCC
Q 025467           74 VSTRHYRAPEVILGL-GWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGR  152 (252)
Q Consensus        74 ~~t~~y~aPE~l~~~-~~~~~~Diws~G~~l~~l~~g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~  152 (252)
                      +-|.+|++||.+.+. .|+++.|||..||++.+|++|.+.+++.++..++..|....|....+.|..+++.-.+....-.
T Consensus       189 vvTLwYrppEllLG~r~yg~~iDiWgAgCimaeMwtrspimqgnteqqql~~Is~LcGs~tkevWP~~d~lpL~~sie~e  268 (376)
T KOG0669|consen  189 VVTLWYRPPELLLGDREYGPPIDIWGAGCIMAEMWTRSPIMQGNTEQQQLHLISQLCGSITKEVWPNVDNLPLYQSIELE  268 (376)
T ss_pred             eeeeecCCHHHhhcccccCCcchhHhHHHHHHHHHccCccccCChHHHHHHHHHHHhccCCcccCCCcccchHHHhccCC
Confidence            558999999999986 5899999999999999999999999999999999999999998887776666543322211100


Q ss_pred             CCCCccccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCC
Q 025467          153 LDWPEGAASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTD  232 (252)
Q Consensus       153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~  232 (252)
                       +.+++.  ...++..+                                        ..-..++++.|||.+||.+||.+
T Consensus       269 -Pl~~~~--~rkv~n~~----------------------------------------kp~~kd~~a~dLle~ll~~DP~k  305 (376)
T KOG0669|consen  269 -PLPKGQ--KRKVKNRL----------------------------------------KPYVKDDEALDLLEKLLKLDPTK  305 (376)
T ss_pred             -CCCcch--hhhhhhhc----------------------------------------ccccCChhHHHHHHHHhccCccc
Confidence             011100  00000000                                        01223568999999999999999


Q ss_pred             CCCHHHHHcCCCCCCccc
Q 025467          233 RLTAREALRHPFFTRDHL  250 (252)
Q Consensus       233 R~ta~e~l~hpwf~~~~~  250 (252)
                      |++++++|.|.||..+++
T Consensus       306 R~~ad~alnh~~F~kdp~  323 (376)
T KOG0669|consen  306 RIDADQALNHDFFWKDPM  323 (376)
T ss_pred             CcchHhhhchhhhhcCCc
Confidence            999999999999998875

>KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only]

Probab=99.97  E-value=1.8e-31  Score=223.46  Aligned_cols=143  Identities=32%  Similarity=0.571  Sum_probs=115.7

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCCC---ccccCC
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQN---YIVSTR   77 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~~---~~~~t~   77 (252)
                      ||.|||+++|.|||+||.|||+                           ...+.+|++|||+|+.+.....   ...||+
T Consensus       112 aL~yLhs~rilhrd~kPqniLl---------------------------~~~~~~KlcdFg~Ar~m~~~t~vltsikGtP  164 (808)
T KOG0597|consen  112 ALYYLHSNRILHRDMKPQNILL---------------------------EKGGTLKLCDFGLARAMSTNTSVLTSIKGTP  164 (808)
T ss_pred             HHHHHHhcCcccccCCcceeee---------------------------cCCCceeechhhhhhhcccCceeeeeccCcc
Confidence            6899999999999999999999                           5667789999999987766542   357999


Q ss_pred             CcccchhhhcCCCCccchhHhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHHHHHHhhcCCCCCCc
Q 025467           78 HYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPE  157 (252)
Q Consensus        78 ~y~aPE~l~~~~~~~~~Diws~G~~l~~l~~g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~  157 (252)
                      .|||||++.+.+|+..+|+||+||++||++.|++||....-......|   .-.                    ...+| 
T Consensus       165 lYmAPElv~e~pyd~~sDlWslGcilYE~~~G~PPF~a~si~~Lv~~I---~~d--------------------~v~~p-  220 (808)
T KOG0597|consen  165 LYMAPELVEEQPYDHTSDLWSLGCILYELYVGQPPFYARSITQLVKSI---LKD--------------------PVKPP-  220 (808)
T ss_pred             cccCHHHHcCCCccchhhHHHHHHHHHHHhcCCCCchHHHHHHHHHHH---hcC--------------------CCCCc-
Confidence            999999999999999999999999999999999999753322222211   111                    11121 


Q ss_pred             cccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCCCCCHH
Q 025467          158 GAASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAR  237 (252)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~ta~  237 (252)
                                                                            ...+..|.+||..+|..||.+|+|+.
T Consensus       221 ------------------------------------------------------~~~S~~f~nfl~gLL~kdP~~RltW~  246 (808)
T KOG0597|consen  221 ------------------------------------------------------STASSSFVNFLQGLLIKDPAQRLTWT  246 (808)
T ss_pred             ------------------------------------------------------ccccHHHHHHHHHHhhcChhhcccHH
Confidence                                                                  23456899999999999999999999


Q ss_pred             HHHcCCCCCCc
Q 025467          238 EALRHPFFTRD  248 (252)
Q Consensus       238 e~l~hpwf~~~  248 (252)
                      +++.|||++..
T Consensus       247 ~Ll~HpF~k~~  257 (808)
T KOG0597|consen  247 DLLGHPFWKGK  257 (808)
T ss_pred             HHhcChHHhhh
Confidence            99999999864

>KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only]

Probab=99.97  E-value=7e-31  Score=212.52  Aligned_cols=173  Identities=31%  Similarity=0.461  Sum_probs=126.4

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCC-----CCCCceE---E---------------
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRM-----PKSSAIK---V---------------   57 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~-----~~~~~~~---l---------------   57 (252)
                      ||+|||-+|||+|||||+|||+-.+|...++||.++.......+.....     .....+.   .               
T Consensus       191 ALEYLHmlGivYRDLKPENILvredGHIMLsDFDLS~~~~~~Pt~~~s~~~~~~~~~~~~~~~~~s~f~~r~~~~~~~~~  270 (459)
T KOG0610|consen  191 ALEYLHMLGIVYRDLKPENILVREDGHIMLSDFDLSLRCPVSPTLVKSSSPRSSGSQPSCRSRQPSCFSPRCLSSSKKRK  270 (459)
T ss_pred             HHHHHHhhceeeccCCcceeEEecCCcEEeeeccccccCCCCCeeeccCCCCCCCCCcccccccccccccchhccccccc
Confidence            7999999999999999999999999999999999876643211111100     0000000   0               


Q ss_pred             -eecCCc--------cccCCCCCccccCCCcccchhhhcCCCCccchhHhHHHHHHHHHhCCCCCCCCChHHHHHHHHHH
Q 025467           58 -IDFGST--------TYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERV  128 (252)
Q Consensus        58 -~dfg~~--------~~~~~~~~~~~~t~~y~aPE~l~~~~~~~~~Diws~G~~l~~l~~g~~pf~~~~~~~~~~~~~~~  128 (252)
                       .|.+..        ..........+||--|.|||++.+.+.+.+.|+|+|||++|||+.|..||.|.++.+.+..+...
T Consensus       271 k~~~~~~~~~p~~~aep~~~RSnSFVGThEYlAPEvI~G~GHgsAVDWWtfGIflYEmLyG~TPFKG~~~~~Tl~NIv~~  350 (459)
T KOG0610|consen  271 KKDESASRSLPELVAEPTGARSNSFVGTHEYLAPEVIRGEGHGSAVDWWTFGIFLYEMLYGTTPFKGSNNKETLRNIVGQ  350 (459)
T ss_pred             cccccccccchhhhcCCCCccccccccccccccceeeecCCCCchhhHHHHHHHHHHHHhCCCCcCCCCchhhHHHHhcC
Confidence             111100        00111122368999999999999999999999999999999999999999999887766654331


Q ss_pred             hCCCchHHHHHhhHHHHHHhhcCCCCCCccccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhh
Q 025467          129 LGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIM  208 (252)
Q Consensus       129 ~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  208 (252)
                      -                       +.+|.                                                   
T Consensus       351 ~-----------------------l~Fp~---------------------------------------------------  356 (459)
T KOG0610|consen  351 P-----------------------LKFPE---------------------------------------------------  356 (459)
T ss_pred             C-----------------------CcCCC---------------------------------------------------
Confidence            1                       11221                                                   


Q ss_pred             hccccchhhHHHHHHHhccCCCCCCCC----HHHHHcCCCCCCcc
Q 025467          209 QHVDHSAGDLTHLLQGLLRYDPTDRLT----AREALRHPFFTRDH  249 (252)
Q Consensus       209 ~~~~~~~~~~~~ll~~~L~~dP~~R~t----a~e~l~hpwf~~~~  249 (252)
                        ...++.+++|||+++|+.||.+|+.    |.||-+||||+...
T Consensus       357 --~~~vs~~akDLIr~LLvKdP~kRlg~~rGA~eIK~HpFF~gVn  399 (459)
T KOG0610|consen  357 --EPEVSSAAKDLIRKLLVKDPSKRLGSKRGAAEIKRHPFFEGVN  399 (459)
T ss_pred             --CCcchhHHHHHHHHHhccChhhhhccccchHHhhcCccccCCC
Confidence              1245569999999999999999998    99999999999863

>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional

Probab=99.97  E-value=5e-31  Score=220.47  Aligned_cols=143  Identities=30%  Similarity=0.488  Sum_probs=112.2

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCCCccccCCCcc
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYR   80 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~~~~~~t~~y~   80 (252)
                      ||+|||++||+||||||+|||++                           ..+.++|+|||.+...........||+.|+
T Consensus       143 aL~~LH~~~ivHrDLkp~NILl~---------------------------~~~~ikL~DFG~a~~~~~~~~~~~gt~~y~  195 (340)
T PTZ00426        143 IFEYLQSLNIVYRDLKPENLLLD---------------------------KDGFIKMTDFGFAKVVDTRTYTLCGTPEYI  195 (340)
T ss_pred             HHHHHHHCCeEccCCCHHHEEEC---------------------------CCCCEEEecCCCCeecCCCcceecCChhhc
Confidence            68999999999999999999994                           345677888887765544344457899999


Q ss_pred             cchhhhcCCCCccchhHhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHHHHHHhhcCCCCCCcccc
Q 025467           81 APEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAA  160 (252)
Q Consensus        81 aPE~l~~~~~~~~~Diws~G~~l~~l~~g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (252)
                      |||++.+..++.++|+||+||++|+|++|..||.+.+.......+...                       ....+    
T Consensus       196 aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~~~~i~~~-----------------------~~~~p----  248 (340)
T PTZ00426        196 APEILLNVGHGKAADWWTLGIFIYEILVGCPPFYANEPLLIYQKILEG-----------------------IIYFP----  248 (340)
T ss_pred             CHHHHhCCCCCccccccchhhHHHHHhcCCCCCCCCCHHHHHHHHhcC-----------------------CCCCC----
Confidence            999999888999999999999999999999999876544333322110                       01011    


Q ss_pred             chhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCCCC-----C
Q 025467          161 SRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRL-----T  235 (252)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~-----t  235 (252)
                                                                         ...+..+.+++++||+.||++|+     |
T Consensus       249 ---------------------------------------------------~~~~~~~~~li~~~l~~dp~~R~~~~~~~  277 (340)
T PTZ00426        249 ---------------------------------------------------KFLDNNCKHLMKKLLSHDLTKRYGNLKKG  277 (340)
T ss_pred             ---------------------------------------------------CCCCHHHHHHHHHHcccCHHHcCCCCCCC
Confidence                                                               12345789999999999999995     8


Q ss_pred             HHHHHcCCCCCCc
Q 025467          236 AREALRHPFFTRD  248 (252)
Q Consensus       236 a~e~l~hpwf~~~  248 (252)
                      ++++++||||...
T Consensus       278 ~~~~~~hp~f~~~  290 (340)
T PTZ00426        278 AQNVKEHPWFGNI  290 (340)
T ss_pred             HHHHHcCCCcCCC
Confidence            9999999999864

>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4

Probab=99.97  E-value=4.3e-31  Score=215.84  Aligned_cols=149  Identities=26%  Similarity=0.417  Sum_probs=111.5

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCC--CCccccCCC
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD--QNYIVSTRH   78 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~--~~~~~~t~~   78 (252)
                      ||+|||+.||+||||||+|||++.                           +..++|+|||++......  .....||..
T Consensus       114 ~l~~lH~~~iiH~dikp~Nill~~---------------------------~~~~kl~Dfg~~~~~~~~~~~~~~~g~~~  166 (285)
T cd05631         114 GLEDLQRERIVYRDLKPENILLDD---------------------------RGHIRISDLGLAVQIPEGETVRGRVGTVG  166 (285)
T ss_pred             HHHHHHhCCEEeCCCCHHHEEECC---------------------------CCCEEEeeCCCcEEcCCCCeecCCCCCCC
Confidence            689999999999999999999943                           445777788777653222  123468999


Q ss_pred             cccchhhhcCCCCccchhHhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHHHHHHhhcCCCCCCcc
Q 025467           79 YRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEG  158 (252)
Q Consensus        79 y~aPE~l~~~~~~~~~Diws~G~~l~~l~~g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~  158 (252)
                      |+|||++.+..++.++||||+||++|++++|..||.+.........+.....                   ....     
T Consensus       167 y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~-------------------~~~~-----  222 (285)
T cd05631         167 YMAPEVINNEKYTFSPDWWGLGCLIYEMIQGQSPFRKRKERVKREEVDRRVK-------------------EDQE-----  222 (285)
T ss_pred             ccCHhhhcCCCCCcccCchhHHHHHHHHHhCCCCCCCCCcchhHHHHHHHhh-------------------cccc-----
Confidence            9999999988899999999999999999999999986543222111111000                   0000     


Q ss_pred             ccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCCCCC---
Q 025467          159 AASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLT---  235 (252)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~t---  235 (252)
                                                                        ......+.++.+|+++||+.||.+|+|   
T Consensus       223 --------------------------------------------------~~~~~~s~~~~~li~~~l~~~P~~R~~~~~  252 (285)
T cd05631         223 --------------------------------------------------EYSEKFSEDAKSICRMLLTKNPKERLGCRG  252 (285)
T ss_pred             --------------------------------------------------cCCccCCHHHHHHHHHHhhcCHHHhcCCCC
Confidence                                                              011234568899999999999999997   


Q ss_pred             --HHHHHcCCCCCCccc
Q 025467          236 --AREALRHPFFTRDHL  250 (252)
Q Consensus       236 --a~e~l~hpwf~~~~~  250 (252)
                        ++++++||||.+...
T Consensus       253 ~~~~~~~~h~~~~~~~~  269 (285)
T cd05631         253 NGAAGVKQHPIFKNINF  269 (285)
T ss_pred             CCHHHHhcCHhhcCCCH
Confidence              999999999988653

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i

>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase

Probab=99.97  E-value=4.3e-30  Score=216.06  Aligned_cols=184  Identities=30%  Similarity=0.541  Sum_probs=132.5

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCC--CccccCCC
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ--NYIVSTRH   78 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~--~~~~~t~~   78 (252)
                      ||+|||++||+||||||+||+++.                           ++.++|+|||.+.......  ....++..
T Consensus       130 aL~~LH~~gi~H~dlkp~Nil~~~---------------------------~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~  182 (353)
T cd07850         130 GIKHLHSAGIIHRDLKPSNIVVKS---------------------------DCTLKILDFGLARTAGTSFMMTPYVVTRY  182 (353)
T ss_pred             HHHHHHhCCeeeCCCCHHHEEECC---------------------------CCCEEEccCccceeCCCCCCCCCCccccc
Confidence            689999999999999999999954                           3456777777665433221  12357788


Q ss_pred             cccchhhhcCCCCccchhHhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHHHHHHhhcCCCCCCcc
Q 025467           79 YRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEG  158 (252)
Q Consensus        79 y~aPE~l~~~~~~~~~Diws~G~~l~~l~~g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~  158 (252)
                      |+|||.+.+..++.++|+||+||++|+|++|..||.+.+....+..+...++.++.++...+......+...........
T Consensus       183 y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  262 (353)
T cd07850         183 YRAPEVILGMGYKENVDIWSVGCIMGEMIRGTVLFPGTDHIDQWNKIIEQLGTPSDEFMSRLQPTVRNYVENRPKYAGYS  262 (353)
T ss_pred             ccCHHHHhCCCCCCchhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHhhhhhhHHhhcCCCCCCcc
Confidence            99999999989999999999999999999999999988888888889999999998887776655444433221100000


Q ss_pred             ccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCCCCCHHH
Q 025467          159 AASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTARE  238 (252)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~ta~e  238 (252)
                            +....  +....                           ...........+..+.+||.+||++||++|||+.|
T Consensus       263 ------~~~~~--~~~~~---------------------------~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e  307 (353)
T cd07850         263 ------FEELF--PDVLF---------------------------PPDSESHNKLKASQARDLLSKMLVIDPEKRISVDD  307 (353)
T ss_pred             ------hhhhC--ccccc---------------------------CcccccccccchhHHHHHHHHHcCCChhhCcCHHH
Confidence                  00000  00000                           00000012334668899999999999999999999


Q ss_pred             HHcCCCCC
Q 025467          239 ALRHPFFT  246 (252)
Q Consensus       239 ~l~hpwf~  246 (252)
                      +|.||||+
T Consensus       308 iL~~~~~~  315 (353)
T cd07850         308 ALQHPYIN  315 (353)
T ss_pred             HhcChhHh
Confidence            99999886

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK

>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta

Probab=99.97  E-value=1.5e-30  Score=216.05  Aligned_cols=143  Identities=28%  Similarity=0.458  Sum_probs=110.3

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCC---CCCccccCC
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERP---DQNYIVSTR   77 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~---~~~~~~~t~   77 (252)
                      ||+|||++||+||||||+|||++.                           .+.++|+|||++.....   ......||+
T Consensus       108 ~L~~lH~~~ivH~dlkp~NIli~~---------------------------~~~~kL~DfG~~~~~~~~~~~~~~~~gt~  160 (320)
T cd05590         108 ALMFLHDKGIIYRDLKLDNVLLDH---------------------------EGHCKLADFGMCKEGIFNGKTTSTFCGTP  160 (320)
T ss_pred             HHHHHHHCCeEeCCCCHHHeEECC---------------------------CCcEEEeeCCCCeecCcCCCcccccccCc
Confidence            689999999999999999999954                           44567777776653211   122346899


Q ss_pred             CcccchhhhcCCCCccchhHhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHHHHHHhhcCCCCCCc
Q 025467           78 HYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPE  157 (252)
Q Consensus        78 ~y~aPE~l~~~~~~~~~Diws~G~~l~~l~~g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~  157 (252)
                      .|+|||++.+..++.++||||+||++|+|++|..||.+.+.......+...                       ....+ 
T Consensus       161 ~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~i~~~-----------------------~~~~~-  216 (320)
T cd05590         161 DYIAPEILQEMLYGPSVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAILND-----------------------EVVYP-  216 (320)
T ss_pred             cccCHHHHcCCCCCCccchhhhHHHHHHHhhCCCCCCCCCHHHHHHHHhcC-----------------------CCCCC-
Confidence            999999999888999999999999999999999999876654443332110                       00000 


Q ss_pred             cccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCCCCCH-
Q 025467          158 GAASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTA-  236 (252)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~ta-  236 (252)
                                                                            ...+.++.+||++||+.||.+|+|+ 
T Consensus       217 ------------------------------------------------------~~~~~~~~~li~~~L~~dP~~R~~~~  242 (320)
T cd05590         217 ------------------------------------------------------TWLSQDAVDILKAFMTKNPTMRLGSL  242 (320)
T ss_pred             ------------------------------------------------------CCCCHHHHHHHHHHcccCHHHCCCCC
Confidence                                                                  1234588999999999999999998 


Q ss_pred             -----HHHHcCCCCCCc
Q 025467          237 -----REALRHPFFTRD  248 (252)
Q Consensus       237 -----~e~l~hpwf~~~  248 (252)
                           ++++.||||+..
T Consensus       243 ~~~~~~~~~~h~~f~~~  259 (320)
T cd05590         243 TLGGEEAILRHPFFKEL  259 (320)
T ss_pred             CCCCHHHHHcCCCcCCC
Confidence                 999999999864

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal

>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases

Probab=99.97  E-value=1.9e-30  Score=214.71  Aligned_cols=143  Identities=37%  Similarity=0.564  Sum_probs=109.6

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCC---CCccccCC
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD---QNYIVSTR   77 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~---~~~~~~t~   77 (252)
                      ||+|||++||+||||||+|||++.                           .+.++|+|||++......   ....+||+
T Consensus       105 ~l~~lH~~~i~HrDlkp~Nili~~---------------------------~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~  157 (312)
T cd05585         105 ALENLHKFNVIYRDLKPENILLDY---------------------------QGHIALCDFGLCKLNMKDDDKTNTFCGTP  157 (312)
T ss_pred             HHHHHHhCCeEeCCCCHHHeEECC---------------------------CCcEEEEECcccccCccCCCccccccCCc
Confidence            689999999999999999999943                           445777788776542211   12346899


Q ss_pred             CcccchhhhcCCCCccchhHhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHHHHHHhhcCCCCCCc
Q 025467           78 HYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPE  157 (252)
Q Consensus        78 ~y~aPE~l~~~~~~~~~Diws~G~~l~~l~~g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~  157 (252)
                      .|+|||++.+..++.++||||+||++|+|++|..||.+.+.......+..                       +....  
T Consensus       158 ~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~pf~~~~~~~~~~~~~~-----------------------~~~~~--  212 (312)
T cd05585         158 EYLAPELLLGHGYTKAVDWWTLGVLLYEMLTGLPPFYDENVNEMYRKILQ-----------------------EPLRF--  212 (312)
T ss_pred             ccCCHHHHcCCCCCCccceechhHHHHHHHhCCCCcCCCCHHHHHHHHHc-----------------------CCCCC--
Confidence            99999999988899999999999999999999999986544332221110                       00111  


Q ss_pred             cccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCCCC---
Q 025467          158 GAASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRL---  234 (252)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~---  234 (252)
                                                                           ....+.++.+||.+||+.||.+|+   
T Consensus       213 -----------------------------------------------------~~~~~~~~~~li~~~L~~dp~~R~~~~  239 (312)
T cd05585         213 -----------------------------------------------------PDGFDRDAKDLLIGLLSRDPTRRLGYN  239 (312)
T ss_pred             -----------------------------------------------------CCcCCHHHHHHHHHHcCCCHHHcCCCC
Confidence                                                                 122456889999999999999997   


Q ss_pred             CHHHHHcCCCCCCc
Q 025467          235 TAREALRHPFFTRD  248 (252)
Q Consensus       235 ta~e~l~hpwf~~~  248 (252)
                      +|.+++.||||...
T Consensus       240 ~~~e~l~hp~~~~~  253 (312)
T cd05585         240 GAQEIKNHPFFSQL  253 (312)
T ss_pred             CHHHHHcCCCcCCC
Confidence            58999999999975

Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl

>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma

Probab=99.97  E-value=1.7e-30  Score=216.47  Aligned_cols=143  Identities=29%  Similarity=0.469  Sum_probs=109.1

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCC---CCCccccCC
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERP---DQNYIVSTR   77 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~---~~~~~~~t~   77 (252)
                      ||+|||++||+||||||+|||++.                           .+.++|+|||++.....   .....+||+
T Consensus       107 aL~~LH~~~ivHrDikp~NIll~~---------------------------~~~~kL~DfG~~~~~~~~~~~~~~~~gt~  159 (328)
T cd05593         107 ALDYLHSGKIVYRDLKLENLMLDK---------------------------DGHIKITDFGLCKEGITDAATMKTFCGTP  159 (328)
T ss_pred             HHHHHHhCCeEecccCHHHeEECC---------------------------CCcEEEecCcCCccCCCcccccccccCCc
Confidence            689999999999999999999954                           44567777776653221   112246899


Q ss_pred             CcccchhhhcCCCCccchhHhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHHHHHHhhcCCCCCCc
Q 025467           78 HYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPE  157 (252)
Q Consensus        78 ~y~aPE~l~~~~~~~~~Diws~G~~l~~l~~g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~  157 (252)
                      .|+|||++.+..++.++||||+||++|++++|..||.+.+.......+..                       .....  
T Consensus       160 ~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~Pf~~~~~~~~~~~~~~-----------------------~~~~~--  214 (328)
T cd05593         160 EYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILM-----------------------EDIKF--  214 (328)
T ss_pred             CccChhhhcCCCCCccCCccccchHHHHHhhCCCCCCCCCHHHHHHHhcc-----------------------CCccC--
Confidence            99999999988899999999999999999999999976554332222110                       00000  


Q ss_pred             cccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCCCC---
Q 025467          158 GAASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRL---  234 (252)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~---  234 (252)
                                                                           ....+.++.+||.+||+.||.+|+   
T Consensus       215 -----------------------------------------------------p~~~~~~~~~li~~~L~~dP~~R~~~~  241 (328)
T cd05593         215 -----------------------------------------------------PRTLSADAKSLLSGLLIKDPNKRLGGG  241 (328)
T ss_pred             -----------------------------------------------------CCCCCHHHHHHHHHHcCCCHHHcCCCC
Confidence                                                                 122356889999999999999997   


Q ss_pred             --CHHHHHcCCCCCCc
Q 025467          235 --TAREALRHPFFTRD  248 (252)
Q Consensus       235 --ta~e~l~hpwf~~~  248 (252)
                        |+.++++||||+..
T Consensus       242 ~~~~~~il~h~~~~~~  257 (328)
T cd05593         242 PDDAKEIMRHSFFTGV  257 (328)
T ss_pred             CCCHHHHhcCCCcCCC
Confidence              89999999999874

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate

>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta

Probab=99.97  E-value=2.1e-30  Score=214.73  Aligned_cols=144  Identities=29%  Similarity=0.491  Sum_probs=108.7

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccC---CCCCccccCC
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYER---PDQNYIVSTR   77 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~---~~~~~~~~t~   77 (252)
                      ||+|||++||+||||||+|||++.+                           +.++|+|||.+....   .......||.
T Consensus       108 ~l~~lH~~~ivHrDlkp~Nil~~~~---------------------------~~~kl~Dfg~~~~~~~~~~~~~~~~gt~  160 (316)
T cd05620         108 GLQFLHSKGIIYRDLKLDNVMLDRD---------------------------GHIKIADFGMCKENVFGDNRASTFCGTP  160 (316)
T ss_pred             HHHHHHHCCeEecCCCHHHeEECCC---------------------------CCEEeCccCCCeecccCCCceeccCCCc
Confidence            6899999999999999999999544                           346666666654321   1122346899


Q ss_pred             CcccchhhhcCCCCccchhHhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHHHHHHhhcCCCCCCc
Q 025467           78 HYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPE  157 (252)
Q Consensus        78 ~y~aPE~l~~~~~~~~~Diws~G~~l~~l~~g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~  157 (252)
                      .|+|||++.+..++.++||||+||++|+|++|..||.+.+.......+...                       ....+ 
T Consensus       161 ~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~Pf~~~~~~~~~~~~~~~-----------------------~~~~~-  216 (316)
T cd05620         161 DYIAPEILQGLKYTFSVDWWSFGVLLYEMLIGQSPFHGDDEDELFESIRVD-----------------------TPHYP-  216 (316)
T ss_pred             CccCHHHHcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHhC-----------------------CCCCC-
Confidence            999999999888999999999999999999999999876554333222110                       00000 


Q ss_pred             cccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCCCCCH-
Q 025467          158 GAASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTA-  236 (252)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~ta-  236 (252)
                                                                            ...+.++.+||.+||+.||++|+|+ 
T Consensus       217 ------------------------------------------------------~~~~~~~~~li~~~l~~dP~~R~~~~  242 (316)
T cd05620         217 ------------------------------------------------------RWITKESKDILEKLFERDPTRRLGVV  242 (316)
T ss_pred             ------------------------------------------------------CCCCHHHHHHHHHHccCCHHHcCCCh
Confidence                                                                  1134578999999999999999997 


Q ss_pred             HHHHcCCCCCCcc
Q 025467          237 REALRHPFFTRDH  249 (252)
Q Consensus       237 ~e~l~hpwf~~~~  249 (252)
                      +++++||||+...
T Consensus       243 ~~~~~h~~f~~~~  255 (316)
T cd05620         243 GNIRGHPFFKTIN  255 (316)
T ss_pred             HHHHcCCCcCCCC
Confidence            6899999998753

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I

>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]

Probab=99.97  E-value=1.7e-30  Score=220.52  Aligned_cols=141  Identities=31%  Similarity=0.469  Sum_probs=113.4

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCCCccccCCCcc
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYR   80 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~~~~~~t~~y~   80 (252)
                      |+.|||++|+|||||||+|||+.                          +..++++|+|||.++.........+-|..|.
T Consensus       427 Av~~LH~~gvvhRDLkp~NIL~~--------------------------~~~g~lrltyFG~a~~~~~~~~tp~~t~~y~  480 (612)
T KOG0603|consen  427 AVDYLHEQGVVHRDLKPGNILLD--------------------------GSAGHLRLTYFGFWSELERSCDTPALTLQYV  480 (612)
T ss_pred             HHHHHHhcCeeecCCChhheeec--------------------------CCCCcEEEEEechhhhCchhhcccchhhccc
Confidence            68999999999999999999993                          1345689999999887665533345688999


Q ss_pred             cchhhhcCCCCccchhHhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHHHHHHhhcCCCCCCcccc
Q 025467           81 APEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAA  160 (252)
Q Consensus        81 aPE~l~~~~~~~~~Diws~G~~l~~l~~g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (252)
                      |||++....|+.++|+||+|++||+|++|+.||........+.   ...+..+                   +       
T Consensus       481 APEvl~~~~yt~acD~WSLGvlLy~ML~G~tp~~~~P~~~ei~---~~i~~~~-------------------~-------  531 (612)
T KOG0603|consen  481 APEVLAIQEYTEACDWWSLGVLLYEMLTGRTLFAAHPAGIEIH---TRIQMPK-------------------F-------  531 (612)
T ss_pred             ChhhhccCCCCcchhhHHHHHHHHHHHhCCCccccCCchHHHH---HhhcCCc-------------------c-------
Confidence            9999998899999999999999999999999998765542221   1111111                   0       


Q ss_pred             chhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCCCCCHHHHH
Q 025467          161 SRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREAL  240 (252)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~ta~e~l  240 (252)
                                                                        ...+++.++|||..||++||.+|+|+.+++
T Consensus       532 --------------------------------------------------s~~vS~~AKdLl~~LL~~dP~~Rl~~~~i~  561 (612)
T KOG0603|consen  532 --------------------------------------------------SECVSDEAKDLLQQLLQVDPALRLGADEIG  561 (612)
T ss_pred             --------------------------------------------------ccccCHHHHHHHHHhccCChhhCcChhhhc
Confidence                                                              034567999999999999999999999999


Q ss_pred             cCCCCC
Q 025467          241 RHPFFT  246 (252)
Q Consensus       241 ~hpwf~  246 (252)
                      .||||.
T Consensus       562 ~h~w~~  567 (612)
T KOG0603|consen  562 AHPWFL  567 (612)
T ss_pred             cCcchh
Confidence            999993

>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase

Probab=99.96  E-value=6.2e-30  Score=210.52  Aligned_cols=174  Identities=29%  Similarity=0.531  Sum_probs=121.8

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCC---CccccCC
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ---NYIVSTR   77 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~---~~~~~t~   77 (252)
                      ||+|||++||+|+||||+||+++.++                           .++++|||.+.......   ....++.
T Consensus       116 aL~~lH~~~i~H~dlkp~Nil~~~~~---------------------------~~kl~dfg~~~~~~~~~~~~~~~~~~~  168 (301)
T cd07873         116 GLNYCHRRKVLHRDLKPQNLLINERG---------------------------ELKLADFGLARAKSIPTKTYSNEVVTL  168 (301)
T ss_pred             HHHHHHhCCeeCCCCCHHHEEECCCC---------------------------cEEECcCcchhccCCCCCcccccceee
Confidence            68999999999999999999995444                           46666666654322111   1235678


Q ss_pred             CcccchhhhcC-CCCccchhHhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHHHHHHhhcCCCCCC
Q 025467           78 HYRAPEVILGL-GWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWP  156 (252)
Q Consensus        78 ~y~aPE~l~~~-~~~~~~Diws~G~~l~~l~~g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~  156 (252)
                      .|+|||.+.+. .++.++||||+||++|+|++|.+||.+.+..+.+..+....+.++...+..+..... +   .....+
T Consensus       169 ~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~---~~~~~~  244 (301)
T cd07873         169 WYRPPDILLGSTDYSTQIDMWGVGCIFYEMSTGRPLFPGSTVEEQLHFIFRILGTPTEETWPGILSNEE-F---KSYNYP  244 (301)
T ss_pred             cccCcHHHhCCCCCccHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCChhhchhhhcccc-c---cccccC
Confidence            89999998764 478899999999999999999999998887777777878777666544332211000 0   000000


Q ss_pred             ccccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCCCCCH
Q 025467          157 EGAASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTA  236 (252)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~ta  236 (252)
                      ..                                            ............+..+.+||.+||++||.+|||+
T Consensus       245 ~~--------------------------------------------~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~  280 (301)
T cd07873         245 KY--------------------------------------------RADCLHNHAPRLDSDGAELLSKLLQFEGRKRISA  280 (301)
T ss_pred             cc--------------------------------------------ccccHHhhcCCCCHHHHHHHHHHhcCCcccCcCH
Confidence            00                                            0000011123456689999999999999999999


Q ss_pred             HHHHcCCCCCCcc
Q 025467          237 REALRHPFFTRDH  249 (252)
Q Consensus       237 ~e~l~hpwf~~~~  249 (252)
                      +|+|+||||....
T Consensus       281 ~eil~h~~f~~~~  293 (301)
T cd07873         281 EEAMKHPYFHCLG  293 (301)
T ss_pred             HHHhcCccccccc
Confidence            9999999998653

Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl

>KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.96  E-value=6.1e-30  Score=210.76  Aligned_cols=162  Identities=29%  Similarity=0.565  Sum_probs=127.5

Q ss_pred             CCceEEeecCCccccCCCCCccccCCCcccchhhhcCCCCccchhHhHHHHHHHHHhCCCCCCCC------ChHHHHHHH
Q 025467           52 SSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTH------ENLEHLAMM  125 (252)
Q Consensus        52 ~~~~~l~dfg~~~~~~~~~~~~~~t~~y~aPE~l~~~~~~~~~Diws~G~~l~~l~~g~~pf~~~------~~~~~~~~~  125 (252)
                      ...+||+|||-|.+.....+.-+.|..|+|||++.+.+|+..+||||++|+++||+||-.+|...      .+.++++.|
T Consensus       390 di~vKIaDlGNACW~~khFT~DIQTRQYRapEVllGsgY~~~ADiWS~AC~~FELaTGDyLFePhsG~~Y~rDEDHiA~i  469 (590)
T KOG1290|consen  390 DIRVKIADLGNACWVHKHFTEDIQTRQYRAPEVLLGSGYSTSADIWSTACMAFELATGDYLFEPHSGENYSRDEDHIALI  469 (590)
T ss_pred             ceeEEEeeccchhhhhhhhchhhhhhhccCcceeecCCCCCchhHHHHHHHHHHhhcCceeecCCCCCCCCccHHHHHHH
Confidence            34679999999998777666668899999999999999999999999999999999999999543      357899999


Q ss_pred             HHHhCCCchHHHHHhhHHHHHHhhcCCCCCCccccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhh
Q 025467          126 ERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQN  205 (252)
Q Consensus       126 ~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  205 (252)
                      ++++|.+|..+..........|.++|.+.......- ..+..++..                                 .
T Consensus       470 ~ELLG~iPr~ia~~Gk~SRdFFnr~G~LrhI~~LK~-WpL~~VL~e---------------------------------K  515 (590)
T KOG1290|consen  470 MELLGKIPRKIALGGKYSRDFFNRRGELRHIRRLKP-WPLYEVLIE---------------------------------K  515 (590)
T ss_pred             HHHHhhccHHHHhcCcchHhhhccccceecccccCC-CcHHHHHHH---------------------------------H
Confidence            999999999988888777778877887654432211 111111110                                 0


Q ss_pred             hhhhccccchhhHHHHHHHhccCCCCCCCCHHHHHcCCCCCCcc
Q 025467          206 LIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRDH  249 (252)
Q Consensus       206 ~~~~~~~~~~~~~~~ll~~~L~~dP~~R~ta~e~l~hpwf~~~~  249 (252)
                        -....+...+|.+||.-||+++|+||+||.+.|+|||+....
T Consensus       516 --Y~~s~e~A~~fsdFL~PmLef~PeKR~tA~~cl~hPwLn~~~  557 (590)
T KOG1290|consen  516 --YEWSEEDAQQFSDFLSPMLEFDPEKRPTAAQCLKHPWLNPVA  557 (590)
T ss_pred             --hCCCHHHHHHHHHHHHHHHhcCccccccHHHHhcCccccCCC
Confidence              011234567999999999999999999999999999998654

>KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]

Probab=99.96  E-value=3.7e-30  Score=187.59  Aligned_cols=173  Identities=30%  Similarity=0.527  Sum_probs=131.6

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCCC---ccccCC
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQN---YIVSTR   77 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~~---~~~~t~   77 (252)
                      +|.|+|++++.|||+||.|.|+                           +.++.+|++|||+++....+..   ..+-|.
T Consensus       113 gl~fchshnvlhrdlkpqnlli---------------------------n~ngelkladfglarafgipvrcysaevvtl  165 (292)
T KOG0662|consen  113 GLGFCHSHNVLHRDLKPQNLLI---------------------------NRNGELKLADFGLARAFGIPVRCYSAEVVTL  165 (292)
T ss_pred             hhhhhhhhhhhhccCCcceEEe---------------------------ccCCcEEecccchhhhcCCceEeeeceeeee
Confidence            5889999999999999999999                           5666788888888876655442   246689


Q ss_pred             CcccchhhhcCC-CCccchhHhHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHHHHHHhhcCCCCC
Q 025467           78 HYRAPEVILGLG-WTYPCDIWSVGCILVELCT-GEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDW  155 (252)
Q Consensus        78 ~y~aPE~l~~~~-~~~~~Diws~G~~l~~l~~-g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~  155 (252)
                      +|++|.++.+.. |++..|+||.||++.++.. |.+.|.+.+..+++.+|...+|.+.++.+..+.+             
T Consensus       166 wyrppdvlfgakly~tsidmwsagcifaelanagrplfpg~dvddqlkrif~~lg~p~ed~wps~t~-------------  232 (292)
T KOG0662|consen  166 WYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEDQWPSMTK-------------  232 (292)
T ss_pred             eccCcceeeeeehhccchHhhhcchHHHHHhhcCCCCCCCCcHHHHHHHHHHHhCCCccccCCcccc-------------
Confidence            999999999875 8999999999999999977 8899999999999999999999987655443322             


Q ss_pred             CccccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCCCCC
Q 025467          156 PEGAASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLT  235 (252)
Q Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~t  235 (252)
                                     +|+...-...-....|                     .+..+.....-+||+.++|.-+|..|++
T Consensus       233 ---------------lpdyk~yp~ypattsw---------------------sqivp~lns~grdllqkll~cnp~qris  276 (292)
T KOG0662|consen  233 ---------------LPDYKPYPIYPATTSW---------------------SQIVPKLNSTGRDLLQKLLKCNPAQRIS  276 (292)
T ss_pred             ---------------CCCCcccCCccccchH---------------------HHHhhhhcchhHHHHHHHhccCcccccC
Confidence                           1111000000000000                     0111334456789999999999999999


Q ss_pred             HHHHHcCCCCCCcc
Q 025467          236 AREALRHPFFTRDH  249 (252)
Q Consensus       236 a~e~l~hpwf~~~~  249 (252)
                      |+++|+||||.+..
T Consensus       277 aeaalqhpyf~d~s  290 (292)
T KOG0662|consen  277 AEAALQHPYFSDFS  290 (292)
T ss_pred             HHHHhcCccccccC
Confidence            99999999998753

>PHA03210 serine/threonine kinase US3; Provisional

Probab=99.96  E-value=5.5e-30  Score=224.14  Aligned_cols=177  Identities=24%  Similarity=0.322  Sum_probs=114.7

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCC----CccccC
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ----NYIVST   76 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~----~~~~~t   76 (252)
                      ||+|||++||+||||||+|||++.                           .+.++|+|||++.......    ....||
T Consensus       279 aL~yLH~~gIiHrDLKP~NILl~~---------------------------~~~vkL~DFGla~~~~~~~~~~~~~~~gt  331 (501)
T PHA03210        279 AVEYIHDKKLIHRDIKLENIFLNC---------------------------DGKIVLGDFGTAMPFEKEREAFDYGWVGT  331 (501)
T ss_pred             HHHHHHhCCeecCCCCHHHEEECC---------------------------CCCEEEEeCCCceecCcccccccccccCC
Confidence            689999999999999999999944                           4457777777775433221    124689


Q ss_pred             CCcccchhhhcCCCCccchhHhHHHHHHHHHhCCCC-CCCC--ChHHHHHHHHHHhCCCchHHHHHhhHHHHHHhhcCCC
Q 025467           77 RHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEAL-FQTH--ENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRL  153 (252)
Q Consensus        77 ~~y~aPE~l~~~~~~~~~Diws~G~~l~~l~~g~~p-f~~~--~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~  153 (252)
                      ..|+|||++.+..++.++||||+||++|+|++|..+ +...  .....+..+....+..++++.....+... +.....+
T Consensus       332 ~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~-~i~~~~~  410 (501)
T PHA03210        332 VATNSPEILAGDGYCEITDIWSCGLILLDMLSHDFCPIGDGGGKPGKQLLKIIDSLSVCDEEFPDPPCKLFD-YIDSAEI  410 (501)
T ss_pred             cCCCCchhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCccCCCCCHHHHHHHHHHhcccChhhcCCcHHHHHH-Hhhhhhc
Confidence            999999999988999999999999999999998754 4322  23344444444444333222110000000 0000000


Q ss_pred             CCCccccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCCC
Q 025467          154 DWPEGAASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDR  233 (252)
Q Consensus       154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R  233 (252)
                      ....                                       ...    +...  .....+.++.++|.+||++||.+|
T Consensus       411 ~~~~---------------------------------------~~~----~~~~--~~~~~~~~~~~li~kmL~~DP~~R  445 (501)
T PHA03210        411 DHAG---------------------------------------HSV----PPLI--RNLGLPADFEYPLVKMLTFDWHLR  445 (501)
T ss_pred             ccCc---------------------------------------cch----hhHH--HhcCCChHHHHHHHHHhccCcccC
Confidence            0000                                       000    0000  012245678999999999999999


Q ss_pred             CCHHHHHcCCCCCCccc
Q 025467          234 LTAREALRHPFFTRDHL  250 (252)
Q Consensus       234 ~ta~e~l~hpwf~~~~~  250 (252)
                      |||.|+|.||||.....
T Consensus       446 psa~elL~hp~f~~~~~  462 (501)
T PHA03210        446 PGAAELLALPLFSAEEE  462 (501)
T ss_pred             cCHHHHhhChhhhcCCc
Confidence            99999999999987643

>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C

Probab=99.96  E-value=3.5e-30  Score=214.22  Aligned_cols=143  Identities=27%  Similarity=0.438  Sum_probs=110.1

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCC---CCCccccCC
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERP---DQNYIVSTR   77 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~---~~~~~~~t~   77 (252)
                      ||+|||++||+||||||+|||++.                           .+.++|+|||++.....   .....+||+
T Consensus       113 al~~lH~~~ivH~dlkp~Nill~~---------------------------~~~~kL~Dfg~~~~~~~~~~~~~~~~gt~  165 (324)
T cd05587         113 GLFFLHSKGIIYRDLKLDNVMLDA---------------------------EGHIKIADFGMCKENIFGGKTTRTFCGTP  165 (324)
T ss_pred             HHHHHHHCCeEecCCCHHHeEEcC---------------------------CCCEEEeecCcceecCCCCCceeeecCCc
Confidence            689999999999999999999954                           44567777776643211   112346899


Q ss_pred             CcccchhhhcCCCCccchhHhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHHHHHHhhcCCCCCCc
Q 025467           78 HYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPE  157 (252)
Q Consensus        78 ~y~aPE~l~~~~~~~~~Diws~G~~l~~l~~g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~  157 (252)
                      .|+|||++.+..++.++|+||+||++|+|++|..||.+.+.......+....                       ...+ 
T Consensus       166 ~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~~~~~~~i~~~~-----------------------~~~~-  221 (324)
T cd05587         166 DYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDEDELFQSIMEHN-----------------------VSYP-  221 (324)
T ss_pred             cccChhhhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHcCC-----------------------CCCC-
Confidence            9999999998889999999999999999999999998766544433322111                       1111 


Q ss_pred             cccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCCCCCH-
Q 025467          158 GAASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTA-  236 (252)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~ta-  236 (252)
                                                                            ...+.++.+|+++||+.||.+|+++ 
T Consensus       222 ------------------------------------------------------~~~~~~~~~li~~~l~~~P~~R~~~~  247 (324)
T cd05587         222 ------------------------------------------------------KSLSKEAVSICKGLLTKHPAKRLGCG  247 (324)
T ss_pred             ------------------------------------------------------CCCCHHHHHHHHHHhhcCHHHcCCCC
Confidence                                                                  1234588999999999999999986 


Q ss_pred             ----HHHHcCCCCCCc
Q 025467          237 ----REALRHPFFTRD  248 (252)
Q Consensus       237 ----~e~l~hpwf~~~  248 (252)
                          .++++||||...
T Consensus       248 ~~~~~~~~~hp~~~~~  263 (324)
T cd05587         248 PTGERDIREHAFFRRI  263 (324)
T ss_pred             CCCHHHHhcCCCcCCC
Confidence                899999999864

Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory

>PHA03209 serine/threonine kinase US3; Provisional

Probab=99.96  E-value=5.3e-30  Score=215.76  Aligned_cols=86  Identities=24%  Similarity=0.384  Sum_probs=68.8

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCC--CCccccCCC
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD--QNYIVSTRH   78 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~--~~~~~~t~~   78 (252)
                      ||+|||++||+||||||+|||+..                           ...++|+|||.+......  .....||..
T Consensus       169 aL~~LH~~~ivHrDlkp~Nill~~---------------------------~~~~kl~DfG~a~~~~~~~~~~~~~gt~~  221 (357)
T PHA03209        169 GLRYLHAQRIIHRDVKTENIFIND---------------------------VDQVCIGDLGAAQFPVVAPAFLGLAGTVE  221 (357)
T ss_pred             HHHHHHHCCeecCCCCHHHEEECC---------------------------CCCEEEecCccccccccCccccccccccc
Confidence            689999999999999999999954                           345677777776532221  123468899


Q ss_pred             cccchhhhcCCCCccchhHhHHHHHHHHHhCCCCC
Q 025467           79 YRAPEVILGLGWTYPCDIWSVGCILVELCTGEALF  113 (252)
Q Consensus        79 y~aPE~l~~~~~~~~~Diws~G~~l~~l~~g~~pf  113 (252)
                      |+|||++.+..++.++||||+||++|+++++..++
T Consensus       222 y~aPE~~~~~~~~~~~DiwSlGvvl~ell~~~~~~  256 (357)
T PHA03209        222 TNAPEVLARDKYNSKADIWSAGIVLFEMLAYPSTI  256 (357)
T ss_pred             ccCCeecCCCCCCchhhHHHHHHHHHHHHHcCCcc
Confidence            99999999888999999999999999999855443

>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon

Probab=99.96  E-value=3.8e-30  Score=213.70  Aligned_cols=143  Identities=23%  Similarity=0.420  Sum_probs=110.6

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCC---CCCccccCC
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERP---DQNYIVSTR   77 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~---~~~~~~~t~   77 (252)
                      ||+|||++||+||||||+|||++.                           .+.++|+|||.+.....   ......||.
T Consensus       108 aL~~LH~~~ivHrDikp~Nill~~---------------------------~~~~kL~Dfg~~~~~~~~~~~~~~~~gt~  160 (321)
T cd05591         108 ALMFLHRHGVIYRDLKLDNILLDA---------------------------EGHCKLADFGMCKEGILNGVTTTTFCGTP  160 (321)
T ss_pred             HHHHHHHCCeeccCCCHHHeEECC---------------------------CCCEEEeecccceecccCCccccccccCc
Confidence            689999999999999999999944                           44567777776653211   122346889


Q ss_pred             CcccchhhhcCCCCccchhHhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHHHHHHhhcCCCCCCc
Q 025467           78 HYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPE  157 (252)
Q Consensus        78 ~y~aPE~l~~~~~~~~~Diws~G~~l~~l~~g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~  157 (252)
                      .|+|||++.+..++.++||||+||++|+|++|..||.+.+....+..+...                       ....+ 
T Consensus       161 ~y~aPE~~~~~~~~~~~DvwslG~il~el~tg~~Pf~~~~~~~~~~~i~~~-----------------------~~~~p-  216 (321)
T cd05591         161 DYIAPEILQELEYGPSVDWWALGVLMYEMMAGQPPFEADNEDDLFESILHD-----------------------DVLYP-  216 (321)
T ss_pred             cccCHHHHcCCCCCCccceechhHHHHHHhcCCCCCCCCCHHHHHHHHHcC-----------------------CCCCC-
Confidence            999999998888999999999999999999999999876654444332210                       00000 


Q ss_pred             cccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCCCC---
Q 025467          158 GAASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRL---  234 (252)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~---  234 (252)
                                                                            ...+.++.+||.+||+.||++|+   
T Consensus       217 ------------------------------------------------------~~~~~~~~~ll~~~L~~dp~~R~~~~  242 (321)
T cd05591         217 ------------------------------------------------------VWLSKEAVSILKAFMTKNPNKRLGCV  242 (321)
T ss_pred             ------------------------------------------------------CCCCHHHHHHHHHHhccCHHHcCCCC
Confidence                                                                  11345889999999999999999   


Q ss_pred             ----CHHHHHcCCCCCCc
Q 025467          235 ----TAREALRHPFFTRD  248 (252)
Q Consensus       235 ----ta~e~l~hpwf~~~  248 (252)
                          ++.++++||||...
T Consensus       243 ~~~~~~~~~~~hp~~~~~  260 (321)
T cd05591         243 ASQGGEDAIKQHPFFKEI  260 (321)
T ss_pred             CCCCCHHHHhcCCccCCC
Confidence                99999999999764

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to

>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase

Probab=99.96  E-value=1.4e-29  Score=212.13  Aligned_cols=174  Identities=33%  Similarity=0.591  Sum_probs=127.2

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCCCccccCCCcc
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYR   80 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~~~~~~t~~y~   80 (252)
                      ||+|||++||+||||||+||+++.                           .+.++++|||.+...........++..|+
T Consensus       129 aL~~LH~~~i~H~dlkp~NIll~~---------------------------~~~~kL~dfg~~~~~~~~~~~~~~~~~y~  181 (342)
T cd07879         129 GLKYIHSAGIIHRDLKPGNLAVNE---------------------------DCELKILDFGLARHADAEMTGYVVTRWYR  181 (342)
T ss_pred             HHHHHHHCCcccCCCCHHHEEECC---------------------------CCCEEEeeCCCCcCCCCCCCCceeeeccc
Confidence            689999999999999999999943                           44577888887765443333346788899


Q ss_pred             cchhhhc-CCCCccchhHhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHHHH-HHhhcCCCCCCcc
Q 025467           81 APEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAE-KYVRRGRLDWPEG  158 (252)
Q Consensus        81 aPE~l~~-~~~~~~~Diws~G~~l~~l~~g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~-~~~~~~~~~~~~~  158 (252)
                      |||.+.+ ..++.++|+||+||++|++++|+.||.+.+....+..+....|..+..+...+..... .+.... ...+  
T Consensus       182 aPE~~~~~~~~~~~~Dv~slGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~--  258 (342)
T cd07879         182 APEVILNWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGPEFVQKLEDKAAKSYIKSL-PKYP--  258 (342)
T ss_pred             ChhhhcCccccCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHhcccchHHHHhhc-CCcc--
Confidence            9999876 3578899999999999999999999998777777788888887776666554432111 111000 0000  


Q ss_pred             ccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCCCCCHHH
Q 025467          159 AASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTARE  238 (252)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~ta~e  238 (252)
                                                                   ...........+..+.+||.+||+.||.+|||+++
T Consensus       259 ---------------------------------------------~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~~~~e  293 (342)
T cd07879         259 ---------------------------------------------RKDFSTLFPKASPQAVDLLEKMLELDVDKRLTATE  293 (342)
T ss_pred             ---------------------------------------------cchHHHHhcCCCHHHHHHHHHHcCCChhhCcCHHH
Confidence                                                         00000011234567899999999999999999999


Q ss_pred             HHcCCCCCCcc
Q 025467          239 ALRHPFFTRDH  249 (252)
Q Consensus       239 ~l~hpwf~~~~  249 (252)
                      ++.||||.+..
T Consensus       294 ~l~h~~f~~~~  304 (342)
T cd07879         294 ALEHPYFDSFR  304 (342)
T ss_pred             HhcCcchhhcc
Confidence            99999998764

Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13

>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases

Probab=99.96  E-value=5.1e-30  Score=214.00  Aligned_cols=152  Identities=29%  Similarity=0.436  Sum_probs=115.7

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCCCccccCCCcc
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYR   80 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~~~~~~t~~y~   80 (252)
                      ||+|||++||+||||||+|||++                           ..+.++|+|||++...........||+.|+
T Consensus       113 ~l~~lH~~~ivH~dlkp~Nil~~---------------------------~~~~~kL~Dfg~a~~~~~~~~~~~gt~~y~  165 (333)
T cd05600         113 AVDALHELGYIHRDLKPENFLID---------------------------ASGHIKLTDFGLSKGIVTYANSVVGSPDYM  165 (333)
T ss_pred             HHHHHHHCCccccCCCHHHEEEC---------------------------CCCCEEEEeCcCCcccccccCCcccCcccc
Confidence            68999999999999999999994                           344678888888766544444457899999


Q ss_pred             cchhhhcCCCCccchhHhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHHHHHHhhcCCCCCCcccc
Q 025467           81 APEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAA  160 (252)
Q Consensus        81 aPE~l~~~~~~~~~Diws~G~~l~~l~~g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (252)
                      |||++.+..++.++||||+||++|+|++|..||.+.+..+....+......                     +..+.   
T Consensus       166 aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~---------------------~~~~~---  221 (333)
T cd05600         166 APEVLRGKGYDFTVDYWSLGCMLYEFLCGFPPFSGSTPNETWENLKYWKET---------------------LQRPV---  221 (333)
T ss_pred             ChhHhcCCCCCCccceecchHHHhhhhhCCCCCCCCCHHHHHHHHHhcccc---------------------ccCCC---
Confidence            999999888999999999999999999999999876654443332211000                     00000   


Q ss_pred             chhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCCCCCHHHHH
Q 025467          161 SRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREAL  240 (252)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~ta~e~l  240 (252)
                                   .                                 .......+.++.+||.+||..+|.+|+|+++++
T Consensus       222 -------------~---------------------------------~~~~~~~s~~~~~li~~~l~~~~~rr~s~~~ll  255 (333)
T cd05600         222 -------------Y---------------------------------DDPRFNLSDEAWDLITKLINDPSRRFGSLEDIK  255 (333)
T ss_pred             -------------C---------------------------------CccccccCHHHHHHHHHHhhChhhhcCCHHHHH
Confidence                         0                                 000023456899999999999999999999999


Q ss_pred             cCCCCCCcc
Q 025467          241 RHPFFTRDH  249 (252)
Q Consensus       241 ~hpwf~~~~  249 (252)
                      +||||++..
T Consensus       256 ~h~~~~~~~  264 (333)
T cd05600         256 NHPFFKEVD  264 (333)
T ss_pred             hCcccCCCC
Confidence            999999753

Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.

>PHA03211 serine/threonine kinase US3; Provisional

Probab=99.96  E-value=7.9e-30  Score=219.92  Aligned_cols=86  Identities=35%  Similarity=0.521  Sum_probs=68.6

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCC-----CCcccc
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD-----QNYIVS   75 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~-----~~~~~~   75 (252)
                      ||+|||++||+||||||+|||++.++                           .++|+|||+++.....     .....|
T Consensus       272 aL~yLH~~gIvHrDLKP~NILl~~~~---------------------------~vkL~DFGla~~~~~~~~~~~~~~~~G  324 (461)
T PHA03211        272 AIDYIHGEGIIHRDIKTENVLVNGPE---------------------------DICLGDFGAACFARGSWSTPFHYGIAG  324 (461)
T ss_pred             HHHHHHHCCEEECcCCHHHEEECCCC---------------------------CEEEcccCCceecccccccccccccCC
Confidence            68999999999999999999995544                           4566666665432211     112468


Q ss_pred             CCCcccchhhhcCCCCccchhHhHHHHHHHHHhCCCCC
Q 025467           76 TRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALF  113 (252)
Q Consensus        76 t~~y~aPE~l~~~~~~~~~Diws~G~~l~~l~~g~~pf  113 (252)
                      |..|+|||++.+..++.++|||||||++|++++|..++
T Consensus       325 T~~Y~APE~~~~~~~~~~sDvwSlGviL~El~~g~~~l  362 (461)
T PHA03211        325 TVDTNAPEVLAGDPYTPSVDIWSAGLVIFEAAVHTASL  362 (461)
T ss_pred             CcCCcCHHHHcCCCCCchHHHHHHHHHHHHHHHcCCCc
Confidence            99999999999888999999999999999999987554

>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N

Probab=99.96  E-value=7.6e-30  Score=212.16  Aligned_cols=143  Identities=25%  Similarity=0.451  Sum_probs=109.6

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCC---CCCccccCC
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERP---DQNYIVSTR   77 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~---~~~~~~~t~   77 (252)
                      ||+|||++||+||||||+||+++.+                           +.++|+|||.+.....   .....+|++
T Consensus       113 al~~lH~~~ivHrdlkp~Nill~~~---------------------------~~~kL~Dfg~~~~~~~~~~~~~~~~g~~  165 (324)
T cd05589         113 GLQYLHENKIVYRDLKLDNLLLDTE---------------------------GFVKIADFGLCKEGMGFGDRTSTFCGTP  165 (324)
T ss_pred             HHHHHHhCCeEecCCCHHHeEECCC---------------------------CcEEeCcccCCccCCCCCCcccccccCc
Confidence            6899999999999999999999544                           4566667766543211   112346899


Q ss_pred             CcccchhhhcCCCCccchhHhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHHHHHHhhcCCCCCCc
Q 025467           78 HYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPE  157 (252)
Q Consensus        78 ~y~aPE~l~~~~~~~~~Diws~G~~l~~l~~g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~  157 (252)
                      .|+|||.+.+..++.++|+||+||++|+|++|..||.+.+..+....+....                       ...+ 
T Consensus       166 ~y~aPE~~~~~~~~~~~DiwslG~il~el~~G~~pf~~~~~~~~~~~i~~~~-----------------------~~~p-  221 (324)
T cd05589         166 EFLAPEVLTETSYTRAVDWWGLGVLIYEMLVGESPFPGDDEEEVFDSIVNDE-----------------------VRYP-  221 (324)
T ss_pred             cccCHhHhcCCCCCcccchhhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCC-----------------------CCCC-
Confidence            9999999998889999999999999999999999998766544333221110                       0011 


Q ss_pred             cccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCCCC---
Q 025467          158 GAASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRL---  234 (252)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~---  234 (252)
                                                                            ...+..+.+||.+||+.||.+||   
T Consensus       222 ------------------------------------------------------~~~~~~~~~li~~~L~~dP~~R~~~~  247 (324)
T cd05589         222 ------------------------------------------------------RFLSREAISIMRRLLRRNPERRLGSG  247 (324)
T ss_pred             ------------------------------------------------------CCCCHHHHHHHHHHhhcCHhHcCCCC
Confidence                                                                  12346789999999999999999   


Q ss_pred             --CHHHHHcCCCCCCc
Q 025467          235 --TAREALRHPFFTRD  248 (252)
Q Consensus       235 --ta~e~l~hpwf~~~  248 (252)
                        ++.++++||||++.
T Consensus       248 ~~~~~~l~~~~~f~~~  263 (324)
T cd05589         248 EKDAEDVKKQPFFRDI  263 (324)
T ss_pred             CCCHHHHhhCCCcCCC
Confidence              79999999999874

Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved

>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta

Probab=99.96  E-value=5.2e-30  Score=213.07  Aligned_cols=143  Identities=27%  Similarity=0.423  Sum_probs=110.5

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCC---CCCccccCC
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERP---DQNYIVSTR   77 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~---~~~~~~~t~   77 (252)
                      ||+|||++||+||||||+|||++.                           .+.++|+|||++.....   ......||+
T Consensus       113 aL~~LH~~~ivHrDlkp~Nill~~---------------------------~~~~kL~DfG~~~~~~~~~~~~~~~~gt~  165 (323)
T cd05616         113 GLFFLHSKGIIYRDLKLDNVMLDS---------------------------EGHIKIADFGMCKENMWDGVTTKTFCGTP  165 (323)
T ss_pred             HHHHHHHCCEEecCCCHHHeEECC---------------------------CCcEEEccCCCceecCCCCCccccCCCCh
Confidence            689999999999999999999954                           44567777776653221   122346899


Q ss_pred             CcccchhhhcCCCCccchhHhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHHHHHHhhcCCCCCCc
Q 025467           78 HYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPE  157 (252)
Q Consensus        78 ~y~aPE~l~~~~~~~~~Diws~G~~l~~l~~g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~  157 (252)
                      .|+|||++.+..++.++||||+||++|+|++|..||.+.+.......+....                       ..++ 
T Consensus       166 ~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~Pf~~~~~~~~~~~i~~~~-----------------------~~~p-  221 (323)
T cd05616         166 DYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHN-----------------------VAYP-  221 (323)
T ss_pred             hhcCHHHhcCCCCCCccchhchhHHHHHHHhCCCCCCCCCHHHHHHHHHhCC-----------------------CCCC-
Confidence            9999999999899999999999999999999999998766544443332211                       1111 


Q ss_pred             cccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCCCCC--
Q 025467          158 GAASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLT--  235 (252)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~t--  235 (252)
                                                                            ...+.++.+|+.+||+.||.+|++  
T Consensus       222 ------------------------------------------------------~~~s~~~~~li~~~l~~~p~~R~~~~  247 (323)
T cd05616         222 ------------------------------------------------------KSMSKEAVAICKGLMTKHPGKRLGCG  247 (323)
T ss_pred             ------------------------------------------------------CcCCHHHHHHHHHHcccCHHhcCCCC
Confidence                                                                  123468899999999999999998  


Q ss_pred             ---HHHHHcCCCCCCc
Q 025467          236 ---AREALRHPFFTRD  248 (252)
Q Consensus       236 ---a~e~l~hpwf~~~  248 (252)
                         ..++++||||...
T Consensus       248 ~~~~~~i~~h~~~~~~  263 (323)
T cd05616         248 PEGERDIKEHAFFRYI  263 (323)
T ss_pred             CCCHHHHhcCCCcCCC
Confidence               4899999999864

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and

>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta

Probab=99.96  E-value=6.2e-30  Score=211.99  Aligned_cols=143  Identities=28%  Similarity=0.430  Sum_probs=109.4

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCC---CCCccccCC
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERP---DQNYIVSTR   77 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~---~~~~~~~t~   77 (252)
                      ||+|||++||+||||||+|||++.                           .+.++|+|||++.....   .....+||+
T Consensus       108 al~~LH~~~ivH~dlkp~Nill~~---------------------------~~~~kL~Dfg~a~~~~~~~~~~~~~~gt~  160 (316)
T cd05592         108 GLQFLHKKGIIYRDLKLDNVLLDK---------------------------DGHIKIADFGMCKENMNGEGKASTFCGTP  160 (316)
T ss_pred             HHHHHHHCCEEeCCCCHHHeEECC---------------------------CCCEEEccCcCCeECCCCCCccccccCCc
Confidence            689999999999999999999944                           44567777777653221   122346899


Q ss_pred             CcccchhhhcCCCCccchhHhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHHHHHHhhcCCCCCCc
Q 025467           78 HYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPE  157 (252)
Q Consensus        78 ~y~aPE~l~~~~~~~~~Diws~G~~l~~l~~g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~  157 (252)
                      .|+|||++.+..++.++||||+||++|+|++|..||.+.+.......+....                       ...  
T Consensus       161 ~y~aPE~~~~~~~~~~~DvwslG~il~ell~G~~Pf~~~~~~~~~~~i~~~~-----------------------~~~--  215 (316)
T cd05592         161 DYIAPEILKGQKYNESVDWWSFGVLLYEMLIGQSPFHGEDEDELFDSILNDR-----------------------PHF--  215 (316)
T ss_pred             cccCHHHHcCCCCCCcccchhHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCC-----------------------CCC--
Confidence            9999999998889999999999999999999999998766544333221100                       000  


Q ss_pred             cccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCCCCCH-
Q 025467          158 GAASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTA-  236 (252)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~ta-  236 (252)
                                                                           ....+.++.+||.+||+.||.+|+|+ 
T Consensus       216 -----------------------------------------------------~~~~~~~~~~ll~~~l~~~P~~R~~~~  242 (316)
T cd05592         216 -----------------------------------------------------PRWISKEAKDCLSKLFERDPTKRLGVD  242 (316)
T ss_pred             -----------------------------------------------------CCCCCHHHHHHHHHHccCCHHHcCCCh
Confidence                                                                 01234578999999999999999986 


Q ss_pred             HHHHcCCCCCCc
Q 025467          237 REALRHPFFTRD  248 (252)
Q Consensus       237 ~e~l~hpwf~~~  248 (252)
                      .++++||||...
T Consensus       243 ~~l~~h~~~~~~  254 (316)
T cd05592         243 GDIRQHPFFRGI  254 (316)
T ss_pred             HHHHcCcccCCC
Confidence            589999999864

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp

>KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification]

Probab=99.96  E-value=6e-31  Score=218.30  Aligned_cols=197  Identities=30%  Similarity=0.580  Sum_probs=138.2

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCC-CccccCCCc
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ-NYIVSTRHY   79 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~-~~~~~t~~y   79 (252)
                      ||.+|-..||+|.||||.|||++.                          ....+||||||.|.....+. +.+.-+..|
T Consensus       548 ALklLK~c~vlHaDIKPDNiLVNE--------------------------~k~iLKLCDfGSA~~~~eneitPYLVSRFY  601 (752)
T KOG0670|consen  548 ALKLLKKCGVLHADIKPDNILVNE--------------------------SKNILKLCDFGSASFASENEITPYLVSRFY  601 (752)
T ss_pred             HHHHHHhcCeeecccCccceEecc--------------------------CcceeeeccCccccccccccccHHHHHHhc
Confidence            688899999999999999999964                          34568999999987655543 234557789


Q ss_pred             ccchhhhcCCCCccchhHhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHHHHHHhhcCCCCCCc-c
Q 025467           80 RAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPE-G  158 (252)
Q Consensus        80 ~aPE~l~~~~~~~~~Diws~G~~l~~l~~g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~-~  158 (252)
                      +|||+++|.+|+...|+||+||+||+++||+..|.|.++.+.+..++.+-|++|..++....-.-.-|...-.+.+.+ .
T Consensus       602 RaPEIiLG~~yd~~iD~WSvgctLYElYtGkIlFpG~TNN~MLrl~me~KGk~p~KmlRKgqF~dqHFD~d~nf~~~e~D  681 (752)
T KOG0670|consen  602 RAPEIILGLPYDYPIDTWSVGCTLYELYTGKILFPGRTNNQMLRLFMELKGKFPNKMLRKGQFKDQHFDQDLNFLYIEVD  681 (752)
T ss_pred             cCcceeecCcccCCccceeeceeeEEeeccceecCCCCcHHHHHHHHHhcCCCcHHHhhhcchhhhhcccccceEEEecc
Confidence            999999999999999999999999999999999999999999999999999999877655432222222221111110 0


Q ss_pred             ccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhh-----hhhccccchhhHHHHHHHhccCCCCCC
Q 025467          159 AASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNL-----IMQHVDHSAGDLTHLLQGLLRYDPTDR  233 (252)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~ll~~~L~~dP~~R  233 (252)
                      ..+......++..                        ......+.+.+     .+......-.++++||.+||..||++|
T Consensus       682 ~vT~r~~~~vm~~------------------------vkPtkdl~s~l~~~q~~~deq~~~~~~~rdLLdkml~LdP~KR  737 (752)
T KOG0670|consen  682 KVTEREKRTVMVN------------------------VKPTKDLGSELIAVQRLPDEQPKIVQQLRDLLDKMLILDPEKR  737 (752)
T ss_pred             ccccceeEEEecc------------------------cCcchhHHHHHhccCCCCchhHHHHHHHHHHHHHHhccChhhc
Confidence            0000000000000                        00001111111     111223345689999999999999999


Q ss_pred             CCHHHHHcCCCCCC
Q 025467          234 LTAREALRHPFFTR  247 (252)
Q Consensus       234 ~ta~e~l~hpwf~~  247 (252)
                      .|..|+|+||||+.
T Consensus       738 it~nqAL~HpFi~~  751 (752)
T KOG0670|consen  738 ITVNQALKHPFITE  751 (752)
T ss_pred             CCHHHHhcCCcccC
Confidence            99999999999975

>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta

Probab=99.96  E-value=4.6e-30  Score=213.36  Aligned_cols=144  Identities=26%  Similarity=0.454  Sum_probs=109.2

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCC---CCccccCC
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD---QNYIVSTR   77 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~---~~~~~~t~   77 (252)
                      ||+|||++||+||||||+|||++.++                           .++|+|||++......   .....||+
T Consensus       107 aL~~LH~~~ivH~Dlkp~NIll~~~~---------------------------~~kL~Dfg~~~~~~~~~~~~~~~~gt~  159 (323)
T cd05595         107 ALEYLHSRDVVYRDIKLENLMLDKDG---------------------------HIKITDFGLCKEGISDGATMKTFCGTP  159 (323)
T ss_pred             HHHHHHHCCeEecCCCHHHEEEcCCC---------------------------CEEecccHHhccccCCCCccccccCCc
Confidence            68999999999999999999995444                           4666666665432111   12246889


Q ss_pred             CcccchhhhcCCCCccchhHhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHHHHHHhhcCCCCCCc
Q 025467           78 HYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPE  157 (252)
Q Consensus        78 ~y~aPE~l~~~~~~~~~Diws~G~~l~~l~~g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~  157 (252)
                      .|+|||++.+..++.++||||+||++|++++|..||.+.+.......+...                       ....  
T Consensus       160 ~y~aPE~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~~~~~~~~~~-----------------------~~~~--  214 (323)
T cd05595         160 EYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILME-----------------------EIRF--  214 (323)
T ss_pred             CcCCcccccCCCCCchhchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHhcC-----------------------CCCC--
Confidence            999999998888999999999999999999999999766544333222110                       0000  


Q ss_pred             cccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCCCC---
Q 025467          158 GAASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRL---  234 (252)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~---  234 (252)
                                                                           ....++++.+||.+||+.||.+|+   
T Consensus       215 -----------------------------------------------------p~~~~~~~~~li~~~L~~dP~~R~~~~  241 (323)
T cd05595         215 -----------------------------------------------------PRTLSPEAKSLLAGLLKKDPKQRLGGG  241 (323)
T ss_pred             -----------------------------------------------------CCCCCHHHHHHHHHHccCCHHHhCCCC
Confidence                                                                 122356889999999999999998   


Q ss_pred             --CHHHHHcCCCCCCcc
Q 025467          235 --TAREALRHPFFTRDH  249 (252)
Q Consensus       235 --ta~e~l~hpwf~~~~  249 (252)
                        ++.++++||||....
T Consensus       242 ~~~~~~~l~h~~~~~~~  258 (323)
T cd05595         242 PSDAKEVMEHRFFLSIN  258 (323)
T ss_pred             CCCHHHHHcCCCcCCCC
Confidence              899999999998743

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in

>KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.96  E-value=8.3e-30  Score=196.92  Aligned_cols=180  Identities=34%  Similarity=0.568  Sum_probs=143.3

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCC----CccccC
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ----NYIVST   76 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~----~~~~~t   76 (252)
                      +|+|||+.||.||||||.|.|+                           +.+-.+||||||+++......    +..+-|
T Consensus       168 GLKYLHsA~ILHRDIKPGNLLV---------------------------NSNCvLKICDFGLARvee~d~~~hMTqEVVT  220 (449)
T KOG0664|consen  168 GLKYLHTANILHRDIKPGNLLV---------------------------NSNCILKICDFGLARTWDQRDRLNMTHEVVT  220 (449)
T ss_pred             hhHHHhhcchhhccCCCccEEe---------------------------ccCceEEecccccccccchhhhhhhHHHHHH
Confidence            5899999999999999999999                           455567888888887654432    224568


Q ss_pred             CCcccchhhhcC-CCCccchhHhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHHHHHHhhcCCCCC
Q 025467           77 RHYRAPEVILGL-GWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDW  155 (252)
Q Consensus        77 ~~y~aPE~l~~~-~~~~~~Diws~G~~l~~l~~g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~  155 (252)
                      .+|+|||.+.+. .|+.+.||||+|||+.|++.++..|...+..+++..|...+|++..+-+....+..+.-+-++...-
T Consensus       221 QYYRAPEiLMGaRhYs~AvDiWSVGCIFaELLgRrILFQAq~PiqQL~lItdLLGTPs~EaMr~ACEGAk~H~LR~~~k~  300 (449)
T KOG0664|consen  221 QYYRAPELLMGARRYTGAVDIWSVGCIFAELLQRKILFQAAGPIEQLQMIIDLLGTPSQEAMKYACEGAKNHVLRAGLRA  300 (449)
T ss_pred             HHhccHHHhhcchhhcCccceehhhHHHHHHHhhhhhhhccChHHHHHHHHHHhCCCcHHHHHHHhhhhHHHhhccCCCC
Confidence            899999999986 5899999999999999999999999999999999999999999998888877777766665554444


Q ss_pred             CccccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCCCCC
Q 025467          156 PEGAASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLT  235 (252)
Q Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~t  235 (252)
                      |...       .+.++.                                     ..+.-..+..+++..+|..||++|++
T Consensus       301 Ps~~-------vLYtls-------------------------------------S~~~~~heav~~~~~~l~~d~dkris  336 (449)
T KOG0664|consen  301 PDTQ-------RLYKIA-------------------------------------SPDDKNHEAVDLLQKLLHFDPDKRIS  336 (449)
T ss_pred             CCcc-------ceeeec-------------------------------------CCcccchHHHHHHHHHhCCCCccccc
Confidence            4211       001100                                     01223347889999999999999999


Q ss_pred             HHHHHcCCCCCCcccc
Q 025467          236 AREALRHPFFTRDHLR  251 (252)
Q Consensus       236 a~e~l~hpwf~~~~~~  251 (252)
                      .++++.|++......|
T Consensus       337 ~~~A~~~~~~~e~R~r  352 (449)
T KOG0664|consen  337 VEEALQHRYLEEGRLR  352 (449)
T ss_pred             Hhhhccccccccccee
Confidence            9999999998876543

>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase

Probab=99.96  E-value=6.6e-30  Score=212.45  Aligned_cols=143  Identities=30%  Similarity=0.535  Sum_probs=109.6

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCC---CCCccccCC
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERP---DQNYIVSTR   77 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~---~~~~~~~t~   77 (252)
                      ||+|||++||+||||||+|||++.                           .+.++|+|||++.....   ......|++
T Consensus       112 ~l~~lH~~~ivH~dlkp~Nil~~~---------------------------~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~  164 (323)
T cd05584         112 ALEHLHQQGIIYRDLKPENILLDA---------------------------QGHVKLTDFGLCKESIHEGTVTHTFCGTI  164 (323)
T ss_pred             HHHHHHHCCeecCCCCHHHeEECC---------------------------CCCEEEeeCcCCeecccCCCcccccCCCc
Confidence            689999999999999999999944                           44567777776643211   112246899


Q ss_pred             CcccchhhhcCCCCccchhHhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHHHHHHhhcCCCCCCc
Q 025467           78 HYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPE  157 (252)
Q Consensus        78 ~y~aPE~l~~~~~~~~~Diws~G~~l~~l~~g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~  157 (252)
                      .|+|||++.+..++.++||||+||++|+|++|..||.+.+....+..+..                       +....+ 
T Consensus       165 ~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~pf~~~~~~~~~~~~~~-----------------------~~~~~~-  220 (323)
T cd05584         165 EYMAPEILMRSGHGKAVDWWSLGALMYDMLTGAPPFTAENRKKTIDKILK-----------------------GKLNLP-  220 (323)
T ss_pred             cccChhhccCCCCCCcceecccHHHHHHHhcCCCCCCCCCHHHHHHHHHc-----------------------CCCCCC-
Confidence            99999999888889999999999999999999999987654433322211                       111111 


Q ss_pred             cccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCCCC---
Q 025467          158 GAASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRL---  234 (252)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~---  234 (252)
                                                                            ...+.++.+||.+||+.||++|+   
T Consensus       221 ------------------------------------------------------~~~~~~~~~li~~~l~~~p~~R~~~~  246 (323)
T cd05584         221 ------------------------------------------------------PYLTPEARDLLKKLLKRNPSSRLGAG  246 (323)
T ss_pred             ------------------------------------------------------CCCCHHHHHHHHHHcccCHhHcCCCC
Confidence                                                                  12346889999999999999999   


Q ss_pred             --CHHHHHcCCCCCCc
Q 025467          235 --TAREALRHPFFTRD  248 (252)
Q Consensus       235 --ta~e~l~hpwf~~~  248 (252)
                        ++.+++.||||...
T Consensus       247 ~~~~~~l~~h~~~~~~  262 (323)
T cd05584         247 PGDAAEVQSHPFFRHV  262 (323)
T ss_pred             CCCHHHHhcCCCcCCC
Confidence              89999999999764

Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in

>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta

Probab=99.96  E-value=1.1e-29  Score=210.58  Aligned_cols=144  Identities=27%  Similarity=0.472  Sum_probs=109.1

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCC---CCCccccCC
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERP---DQNYIVSTR   77 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~---~~~~~~~t~   77 (252)
                      ||+|||++||+||||||+|||++.                           .+.++|+|||++.....   ......||.
T Consensus       108 al~~LH~~~ivHrdikp~Nil~~~---------------------------~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~  160 (316)
T cd05619         108 GLQFLHSKGIVYRDLKLDNILLDT---------------------------DGHIKIADFGMCKENMLGDAKTCTFCGTP  160 (316)
T ss_pred             HHHHHHhCCeEeCCCCHHHEEECC---------------------------CCCEEEccCCcceECCCCCCceeeecCCc
Confidence            689999999999999999999954                           34567777776653211   112346889


Q ss_pred             CcccchhhhcCCCCccchhHhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHHHHHHhhcCCCCCCc
Q 025467           78 HYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPE  157 (252)
Q Consensus        78 ~y~aPE~l~~~~~~~~~Diws~G~~l~~l~~g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~  157 (252)
                      .|+|||++.+..++.++|+||+||++|++++|..||.+.+..+....+...                       ....+ 
T Consensus       161 ~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~~~~~~~i~~~-----------------------~~~~~-  216 (316)
T cd05619         161 DYIAPEILLGQKYNTSVDWWSFGVLLYEMLIGQSPFHGHDEEELFQSIRMD-----------------------NPCYP-  216 (316)
T ss_pred             cccCHHHHcCCCCCchhhhhhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhC-----------------------CCCCC-
Confidence            999999999888999999999999999999999999876544333222110                       00000 


Q ss_pred             cccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCCCCCHH
Q 025467          158 GAASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAR  237 (252)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~ta~  237 (252)
                                                                            ...+.++.+|+.+||+.||.+|+|+.
T Consensus       217 ------------------------------------------------------~~~~~~~~~li~~~l~~~P~~R~~~~  242 (316)
T cd05619         217 ------------------------------------------------------RWLTREAKDILVKLFVREPERRLGVK  242 (316)
T ss_pred             ------------------------------------------------------ccCCHHHHHHHHHHhccCHhhcCCCh
Confidence                                                                  11345789999999999999999996


Q ss_pred             -HHHcCCCCCCcc
Q 025467          238 -EALRHPFFTRDH  249 (252)
Q Consensus       238 -e~l~hpwf~~~~  249 (252)
                       ++++||||+...
T Consensus       243 ~~l~~h~~~~~~~  255 (316)
T cd05619         243 GDIRQHPFFREID  255 (316)
T ss_pred             HHHHcCcccCCCC
Confidence             999999998753

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in

>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C

Probab=99.96  E-value=8.5e-30  Score=211.35  Aligned_cols=143  Identities=26%  Similarity=0.431  Sum_probs=109.2

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCC---CCCccccCC
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERP---DQNYIVSTR   77 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~---~~~~~~~t~   77 (252)
                      ||+|||++||+||||||+||+++.+                           +.++|+|||++.....   .....+|+.
T Consensus       108 ~l~~LH~~~ivH~dlkp~Nill~~~---------------------------~~~kl~Dfg~~~~~~~~~~~~~~~~g~~  160 (318)
T cd05570         108 GLQFLHERGIIYRDLKLDNVLLDSE---------------------------GHIKIADFGMCKEGILGGVTTSTFCGTP  160 (318)
T ss_pred             HHHHHHhCCeEccCCCHHHeEECCC---------------------------CcEEecccCCCeecCcCCCcccceecCc
Confidence            6899999999999999999999544                           4566777776643211   112236889


Q ss_pred             CcccchhhhcCCCCccchhHhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHHHHHHhhcCCCCCCc
Q 025467           78 HYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPE  157 (252)
Q Consensus        78 ~y~aPE~l~~~~~~~~~Diws~G~~l~~l~~g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~  157 (252)
                      .|+|||++.+..++.++|+||+||++|++++|..||.+.+.......+..                       .....  
T Consensus       161 ~y~aPE~~~~~~~~~~~DiwslGvil~~l~~G~~pf~~~~~~~~~~~i~~-----------------------~~~~~--  215 (318)
T cd05570         161 DYIAPEILSYQPYGPAVDWWALGVLLYEMLAGQSPFEGDDEDELFQSILE-----------------------DEVRY--  215 (318)
T ss_pred             cccCHHHhcCCCCCcchhhhhHHHHHHHHhhCCCCCCCCCHHHHHHHHHc-----------------------CCCCC--
Confidence            99999999988999999999999999999999999987654433322111                       00000  


Q ss_pred             cccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCCCCCH-
Q 025467          158 GAASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTA-  236 (252)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~ta-  236 (252)
                                                                           ....+..+.+||.+||+.||.+|||+ 
T Consensus       216 -----------------------------------------------------~~~~~~~~~~li~~~l~~dP~~R~s~~  242 (318)
T cd05570         216 -----------------------------------------------------PRWLSKEAKSILKSFLTKNPEKRLGCL  242 (318)
T ss_pred             -----------------------------------------------------CCcCCHHHHHHHHHHccCCHHHcCCCC
Confidence                                                                 01234688999999999999999999 


Q ss_pred             ----HHHHcCCCCCCc
Q 025467          237 ----REALRHPFFTRD  248 (252)
Q Consensus       237 ----~e~l~hpwf~~~  248 (252)
                          .++++||||+..
T Consensus       243 ~~~~~~ll~~~~~~~~  258 (318)
T cd05570         243 PTGEQDIKGHPFFREI  258 (318)
T ss_pred             CCCHHHHhcCCCcCCC
Confidence                999999999874

Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re

>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha

Probab=99.96  E-value=3.9e-30  Score=214.01  Aligned_cols=143  Identities=27%  Similarity=0.459  Sum_probs=108.7

Q ss_pred             Chhhhhc-cCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCC---CCCccccC
Q 025467            1 MFAVMHD-LCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERP---DQNYIVST   76 (252)
Q Consensus         1 aL~~lH~-~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~---~~~~~~~t   76 (252)
                      ||+|||+ .||+||||||+|||++.                           .+.++|+|||++.....   ......||
T Consensus       107 aL~~lH~~~~ivHrDikp~NIll~~---------------------------~~~~kL~Dfg~~~~~~~~~~~~~~~~gt  159 (325)
T cd05594         107 ALDYLHSEKNVVYRDLKLENLMLDK---------------------------DGHIKITDFGLCKEGIKDGATMKTFCGT  159 (325)
T ss_pred             HHHHHHhcCCEEecCCCCCeEEECC---------------------------CCCEEEecCCCCeecCCCCcccccccCC
Confidence            6899997 79999999999999944                           44567777776653221   11224689


Q ss_pred             CCcccchhhhcCCCCccchhHhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHHHHHHhhcCCCCCC
Q 025467           77 RHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWP  156 (252)
Q Consensus        77 ~~y~aPE~l~~~~~~~~~Diws~G~~l~~l~~g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~  156 (252)
                      +.|+|||++.+..++.++||||+||++|+|++|..||.+.+.......+..                       ..... 
T Consensus       160 ~~y~aPE~~~~~~~~~~~DiwslG~il~el~tG~~Pf~~~~~~~~~~~i~~-----------------------~~~~~-  215 (325)
T cd05594         160 PEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILM-----------------------EEIRF-  215 (325)
T ss_pred             cccCCHHHHccCCCCCccccccccceeeeeccCCCCCCCCCHHHHHHHHhc-----------------------CCCCC-
Confidence            999999999988899999999999999999999999976554332222110                       00000 


Q ss_pred             ccccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCCCC--
Q 025467          157 EGAASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRL--  234 (252)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~--  234 (252)
                                                                            ....+.++.+||.+||+.||++|+  
T Consensus       216 ------------------------------------------------------p~~~~~~~~~li~~~L~~dP~~R~~~  241 (325)
T cd05594         216 ------------------------------------------------------PRTLSPEAKSLLSGLLKKDPKQRLGG  241 (325)
T ss_pred             ------------------------------------------------------CCCCCHHHHHHHHHHhhcCHHHhCCC
Confidence                                                                  112346889999999999999997  


Q ss_pred             ---CHHHHHcCCCCCCc
Q 025467          235 ---TAREALRHPFFTRD  248 (252)
Q Consensus       235 ---ta~e~l~hpwf~~~  248 (252)
                         |+.++++||||...
T Consensus       242 ~~~~~~~il~h~~~~~~  258 (325)
T cd05594         242 GPDDAKEIMQHKFFAGI  258 (325)
T ss_pred             CCCCHHHHhcCCCcCCC
Confidence               99999999999864

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien

>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2

Probab=99.96  E-value=3e-29  Score=209.15  Aligned_cols=92  Identities=34%  Similarity=0.533  Sum_probs=73.4

Q ss_pred             Chhhhhcc-CccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCC-CCccccCCC
Q 025467            1 MFAVMHDL-CMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD-QNYIVSTRH   78 (252)
Q Consensus         1 aL~~lH~~-~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~-~~~~~~t~~   78 (252)
                      ||.|||+. +|+||||||+|||++.++                           .++|+|||.+...... .....|+..
T Consensus       115 ~l~~lH~~~~ivH~dlkp~Nil~~~~~---------------------------~~kl~Dfg~~~~~~~~~~~~~~g~~~  167 (331)
T cd06649         115 GLAYLREKHQIMHRDVKPSNILVNSRG---------------------------EIKLCDFGVSGQLIDSMANSFVGTRS  167 (331)
T ss_pred             HHHHHhhcCCEEcCCCChhhEEEcCCC---------------------------cEEEccCcccccccccccccCCCCcC
Confidence            68999985 699999999999995544                           4666677666433221 223468899


Q ss_pred             cccchhhhcCCCCccchhHhHHHHHHHHHhCCCCCCCCChH
Q 025467           79 YRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENL  119 (252)
Q Consensus        79 y~aPE~l~~~~~~~~~Diws~G~~l~~l~~g~~pf~~~~~~  119 (252)
                      |+|||++.+..++.++||||+||++|++++|+.||...+..
T Consensus       168 y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~  208 (331)
T cd06649         168 YMSPERLQGTHYSVQSDIWSMGLSLVELAIGRYPIPPPDAK  208 (331)
T ss_pred             cCCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHH
Confidence            99999999888999999999999999999999999766543

Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst

>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase

Probab=99.96  E-value=4.5e-29  Score=209.11  Aligned_cols=173  Identities=30%  Similarity=0.551  Sum_probs=127.0

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCCCccccCCCcc
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYR   80 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~~~~~~t~~y~   80 (252)
                      ||+|||++||+||||+|+||+++.+                           +.++|+|||.+...........++..|+
T Consensus       130 aL~~LH~~gi~H~dlkp~Nill~~~---------------------------~~~kL~dfg~~~~~~~~~~~~~~~~~y~  182 (343)
T cd07851         130 GLKYIHSAGIIHRDLKPSNIAVNED---------------------------CELKILDFGLARHTDDEMTGYVATRWYR  182 (343)
T ss_pred             HHHHHHHCCeecCCCCHHHeEECCC---------------------------CCEEEccccccccccccccCCccccccc
Confidence            6899999999999999999999543                           4567777777665444334446788899


Q ss_pred             cchhhhcC-CCCccchhHhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHHH-HHHhhcCCCCCCcc
Q 025467           81 APEVILGL-GWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHA-EKYVRRGRLDWPEG  158 (252)
Q Consensus        81 aPE~l~~~-~~~~~~Diws~G~~l~~l~~g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~-~~~~~~~~~~~~~~  158 (252)
                      |||.+.+. .++.++|+||+||++|++++|+.||.+.+....+..+....+.+++.+...+.... ..+........   
T Consensus       183 aPE~~~~~~~~~~~~DvwslGv~l~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---  259 (343)
T cd07851         183 APEIMLNWMHYNQTVDIWSVGCIMAELLTGKTLFPGSDHIDQLKRIMNLVGTPDEELLQKISSESARNYIQSLPQMP---  259 (343)
T ss_pred             CHHHHhCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCHHHHhhccchhHHHHHHhccccC---
Confidence            99998753 57889999999999999999999999888777888888888887776655443211 11111000000   


Q ss_pred             ccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCCCCCHHH
Q 025467          159 AASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTARE  238 (252)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~ta~e  238 (252)
                                                                   ...........+..+.+||.+||+.||.+|||+.+
T Consensus       260 ---------------------------------------------~~~~~~~~~~~s~~l~dli~~~l~~~P~~Rpt~~e  294 (343)
T cd07851         260 ---------------------------------------------KKDFKEVFSGANPLAIDLLEKMLVLDPDKRITAAE  294 (343)
T ss_pred             ---------------------------------------------CCCHHHHhccCCHHHHHHHHHhCCCChhhCCCHHH
Confidence                                                         00000111234678999999999999999999999


Q ss_pred             HHcCCCCCCc
Q 025467          239 ALRHPFFTRD  248 (252)
Q Consensus       239 ~l~hpwf~~~  248 (252)
                      +++||||..-
T Consensus       295 ll~h~~~~~~  304 (343)
T cd07851         295 ALAHPYLAEY  304 (343)
T ss_pred             HhcCCCcccc
Confidence            9999999764

Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK

>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like

Probab=99.96  E-value=4.1e-29  Score=203.81  Aligned_cols=169  Identities=33%  Similarity=0.545  Sum_probs=117.3

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCC---CccccCC
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ---NYIVSTR   77 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~---~~~~~t~   77 (252)
                      ||+|||++||+|+||+|+||+++.++                           .++|+|||.+.......   ....+++
T Consensus       113 ~L~~lH~~~i~H~dl~p~nil~~~~~---------------------------~~~l~dfg~~~~~~~~~~~~~~~~~~~  165 (285)
T cd07861         113 GILFCHSRRVLHRDLKPQNLLIDNKG---------------------------VIKLADFGLARAFGIPVRVYTHEVVTL  165 (285)
T ss_pred             HHHHHHhCCeeecCCCHHHEEEcCCC---------------------------cEEECcccceeecCCCcccccCCcccc
Confidence            68999999999999999999995544                           45566666554322111   1124678


Q ss_pred             CcccchhhhcC-CCCccchhHhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHHHHHHhhcCCCCCC
Q 025467           78 HYRAPEVILGL-GWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWP  156 (252)
Q Consensus        78 ~y~aPE~l~~~-~~~~~~Diws~G~~l~~l~~g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~  156 (252)
                      .|+|||.+.+. .++.++|+||+||+++++++|+.||.+.........+....+.+.+..+............-  ..+.
T Consensus       166 ~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~  243 (285)
T cd07861         166 WYRAPEVLLGSPRYSTPVDIWSIGTIFAEMATKKPLFHGDSEIDQLFRIFRILGTPTEDVWPGVTSLPDYKNTF--PKWK  243 (285)
T ss_pred             cccChHHhcCCCCcCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCChhhhhcchhhHHHHhhc--cccC
Confidence            89999998764 46889999999999999999999999887777776666666665544433222111100000  0000


Q ss_pred             ccccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCCCCCH
Q 025467          157 EGAASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTA  236 (252)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~ta  236 (252)
                                                                     ...........+.++.+||.+||+.||.+|||+
T Consensus       244 -----------------------------------------------~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~  276 (285)
T cd07861         244 -----------------------------------------------KGSLRSAVKNLDEDGLDLLEKMLIYDPAKRISA  276 (285)
T ss_pred             -----------------------------------------------cchhHHhcCCCCHHHHHHHHHHhcCChhhCCCH
Confidence                                                           000011123466788999999999999999999


Q ss_pred             HHHHcCCCC
Q 025467          237 REALRHPFF  245 (252)
Q Consensus       237 ~e~l~hpwf  245 (252)
                      .+++.||||
T Consensus       277 ~~ll~~~~~  285 (285)
T cd07861         277 KKALNHPYF  285 (285)
T ss_pred             HHHhcCCCC
Confidence            999999998

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2

>KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.96  E-value=1.5e-30  Score=211.90  Aligned_cols=144  Identities=28%  Similarity=0.438  Sum_probs=111.2

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCC---CccccCC
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ---NYIVSTR   77 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~---~~~~~t~   77 (252)
                      ||.|||+++.+|||||+.|||+...+                           .+|++|||.+.......   ...+||+
T Consensus       123 ~l~ylH~~~kiHrDIKaanil~s~~g---------------------------~vkl~DfgVa~ql~~~~~rr~tfvGTP  175 (467)
T KOG0201|consen  123 GLDYLHSEKKIHRDIKAANILLSESG---------------------------DVKLADFGVAGQLTNTVKRRKTFVGTP  175 (467)
T ss_pred             HhhhhhhcceecccccccceeEeccC---------------------------cEEEEecceeeeeechhhccccccccc
Confidence            68999999999999999999996544                           46667776664433321   3358999


Q ss_pred             CcccchhhhcCCCCccchhHhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHHHHHHhhcCCCCCCc
Q 025467           78 HYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPE  157 (252)
Q Consensus        78 ~y~aPE~l~~~~~~~~~Diws~G~~l~~l~~g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~  157 (252)
                      .|||||++.+..|+.++||||||++.++|++|.+|+.......++..       +|                +       
T Consensus       176 fwMAPEVI~~~~Y~~KADIWSLGITaiEla~GePP~s~~hPmrvlfl-------Ip----------------k-------  225 (467)
T KOG0201|consen  176 FWMAPEVIKQSGYDTKADIWSLGITAIELAKGEPPHSKLHPMRVLFL-------IP----------------K-------  225 (467)
T ss_pred             cccchhhhccccccchhhhhhhhHHHHHHhcCCCCCcccCcceEEEe-------cc----------------C-------
Confidence            99999999988999999999999999999999999976544211111       10                0       


Q ss_pred             cccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCCCCCHH
Q 025467          158 GAASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAR  237 (252)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~ta~  237 (252)
                                                                     ...+......++.+++|+..||+.||+.||||.
T Consensus       226 -----------------------------------------------~~PP~L~~~~S~~~kEFV~~CL~k~P~~RpsA~  258 (467)
T KOG0201|consen  226 -----------------------------------------------SAPPRLDGDFSPPFKEFVEACLDKNPEFRPSAK  258 (467)
T ss_pred             -----------------------------------------------CCCCccccccCHHHHHHHHHHhhcCcccCcCHH
Confidence                                                           000111234567899999999999999999999


Q ss_pred             HHHcCCCCCCc
Q 025467          238 EALRHPFFTRD  248 (252)
Q Consensus       238 e~l~hpwf~~~  248 (252)
                      ++|+|+|++..
T Consensus       259 ~LLKh~FIk~a  269 (467)
T KOG0201|consen  259 ELLKHKFIKRA  269 (467)
T ss_pred             HHhhhHHHHhc
Confidence            99999999874

>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5

Probab=99.96  E-value=4e-29  Score=203.88  Aligned_cols=169  Identities=29%  Similarity=0.482  Sum_probs=114.8

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCC---CccccCC
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ---NYIVSTR   77 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~---~~~~~t~   77 (252)
                      ||+|||++||+||||||+||+++.++                           .++|+|||.+.......   ....++.
T Consensus       111 al~~LH~~~i~H~dl~~~nil~~~~~---------------------------~~~l~dfg~~~~~~~~~~~~~~~~~~~  163 (284)
T cd07839         111 GLAFCHSHNVLHRDLKPQNLLINKNG---------------------------ELKLADFGLARAFGIPVRCYSAEVVTL  163 (284)
T ss_pred             HHHHHHHCCEecCCCCHHHEEEcCCC---------------------------cEEECccchhhccCCCCCCcCCCcccc
Confidence            68999999999999999999995544                           45666666554322211   1235678


Q ss_pred             CcccchhhhcC-CCCccchhHhHHHHHHHHHhCCCCC-CCCChHHHHHHHHHHhCCCchHHHHHhhHHHHHHhhcCCCCC
Q 025467           78 HYRAPEVILGL-GWTYPCDIWSVGCILVELCTGEALF-QTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDW  155 (252)
Q Consensus        78 ~y~aPE~l~~~-~~~~~~Diws~G~~l~~l~~g~~pf-~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~  155 (252)
                      .|+|||.+.+. .++.++|+||+||++|+|++|..|+ .+.+....+..+.+..+..++..+.........      ...
T Consensus       164 ~y~aPE~~~~~~~~~~~~DiwslG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~  237 (284)
T cd07839         164 WYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEESWPGVSKLPDY------KPY  237 (284)
T ss_pred             CCcChHHHhCCcccCcHHHHHHHHHHHHHHHhcCCCCcCCCCHHHHHHHHHHHhCCCChHHhHHhhhcccc------ccc
Confidence            89999998775 4689999999999999999988775 555555666667777776654433222210000      000


Q ss_pred             CccccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCCCCC
Q 025467          156 PEGAASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLT  235 (252)
Q Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~t  235 (252)
                      +.. ..                                          ...........+.++.+|+.+||+.||.+|||
T Consensus       238 ~~~-~~------------------------------------------~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t  274 (284)
T cd07839         238 PMY-PA------------------------------------------TTSLVNVVPKLNSTGRDLLQNLLVCNPVQRIS  274 (284)
T ss_pred             CCC-CC------------------------------------------cchhhhhcccCCHHHHHHHHHHhcCChhhcCC
Confidence            000 00                                          00000112345678999999999999999999


Q ss_pred             HHHHHcCCCC
Q 025467          236 AREALRHPFF  245 (252)
Q Consensus       236 a~e~l~hpwf  245 (252)
                      ++++++||||
T Consensus       275 ~~~il~h~~f  284 (284)
T cd07839         275 AEEALQHPYF  284 (284)
T ss_pred             HHHHhcCCCC
Confidence            9999999998

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also

>KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.96  E-value=1.6e-29  Score=211.12  Aligned_cols=146  Identities=29%  Similarity=0.581  Sum_probs=110.2

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCCCc-----ccc
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNY-----IVS   75 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~~~-----~~~   75 (252)
                      |++++|++||||.||||.|+|+                            ..+.+||+|||.|.......+.     .+|
T Consensus       472 aV~~IH~~gIVHSDLKPANFLl----------------------------VkG~LKLIDFGIA~aI~~DTTsI~kdsQvG  523 (677)
T KOG0596|consen  472 AVKTIHQHGIVHSDLKPANFLL----------------------------VKGRLKLIDFGIANAIQPDTTSIVKDSQVG  523 (677)
T ss_pred             HHHHHHHhceeecCCCcccEEE----------------------------EeeeEEeeeechhcccCccccceeeccccC
Confidence            5789999999999999999998                            4567899999999876665443     589


Q ss_pred             CCCcccchhhhcCC-----------CCccchhHhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHHH
Q 025467           76 TRHYRAPEVILGLG-----------WTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHA  144 (252)
Q Consensus        76 t~~y~aPE~l~~~~-----------~~~~~Diws~G~~l~~l~~g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~  144 (252)
                      |+.||+||.+....           .+.++||||+|||||+|+.|+.||....  .+++++..+..+--           
T Consensus       524 T~NYMsPEAl~~~~s~~~~~~~k~Ki~r~SDvWSLGCILYqMvYgktPf~~~~--n~~aKl~aI~~P~~-----------  590 (677)
T KOG0596|consen  524 TVNYMSPEALTDMSSSRENGKSKIKISRKSDVWSLGCILYQMVYGKTPFGQII--NQIAKLHAITDPNH-----------  590 (677)
T ss_pred             cccccCHHHHhhccccccCCCcceeecCccchhhhhhHHHHHHhcCCchHHHH--HHHHHHHhhcCCCc-----------
Confidence            99999999996432           5678999999999999999999996322  13333333222200           


Q ss_pred             HHHhhcCCCCCCccccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHH
Q 025467          145 EKYVRRGRLDWPEGAASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQG  224 (252)
Q Consensus       145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~  224 (252)
                             .+.+|.                                                      .....++.++|+.
T Consensus       591 -------~Iefp~------------------------------------------------------~~~~~~li~~mK~  609 (677)
T KOG0596|consen  591 -------EIEFPD------------------------------------------------------IPENDELIDVMKC  609 (677)
T ss_pred             -------cccccC------------------------------------------------------CCCchHHHHHHHH
Confidence                   111111                                                      1112348999999


Q ss_pred             hccCCCCCCCCHHHHHcCCCCCCc
Q 025467          225 LLRYDPTDRLTAREALRHPFFTRD  248 (252)
Q Consensus       225 ~L~~dP~~R~ta~e~l~hpwf~~~  248 (252)
                      ||.+||.+|||+.++|+|||..-.
T Consensus       610 CL~rdPkkR~si~eLLqhpFl~~~  633 (677)
T KOG0596|consen  610 CLARDPKKRWSIPELLQHPFLQIQ  633 (677)
T ss_pred             HHhcCcccCCCcHHHhcCcccccc
Confidence            999999999999999999998764

>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1

Probab=99.96  E-value=5.8e-29  Score=207.55  Aligned_cols=174  Identities=31%  Similarity=0.522  Sum_probs=125.1

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCC-------CCcc
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD-------QNYI   73 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~-------~~~~   73 (252)
                      ||+|||++||+||||||+||++..++                           .++|+|||.+......       ....
T Consensus       117 aL~~LH~~givH~dlkp~Nili~~~~---------------------------~~kl~Dfg~a~~~~~~~~~~~~~~~~~  169 (332)
T cd07857         117 GLKYIHSANVLHRDLKPGNLLVNADC---------------------------ELKICDFGLARGFSENPGENAGFMTEY  169 (332)
T ss_pred             HHHHHHhCCcccCCCCHHHeEEcCCC---------------------------CEEeCcCCCceecccccccccccccCc
Confidence            68999999999999999999995544                           4555566555432111       1123


Q ss_pred             ccCCCcccchhhhc-CCCCccchhHhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHHHHHHhhcCC
Q 025467           74 VSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGR  152 (252)
Q Consensus        74 ~~t~~y~aPE~l~~-~~~~~~~Diws~G~~l~~l~~g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~  152 (252)
                      .|+..|+|||.+.+ ..++.++|+||+||++|++++|.+||.+.+....+..+...+|.+++.....+............
T Consensus       170 ~g~~~y~aPE~~~~~~~~~~~~Di~slGv~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  249 (332)
T cd07857         170 VATRWYRAPEIMLSFQSYTKAIDVWSVGCILAELLGRKPVFKGKDYVDQLNQILQVLGTPDEETLSRIGSPKAQNYIRSL  249 (332)
T ss_pred             ccCccccCcHHHhCCCCCCcHHHHHHHHHHHHHHHhCCcCCCCCCHHHHHHHHHHHhCCCCHHHHHhhhhhhHHHHHHhc
Confidence            67889999998876 46789999999999999999999999988888899999999998887665544332111110000


Q ss_pred             CCCCccccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCC
Q 025467          153 LDWPEGAASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTD  232 (252)
Q Consensus       153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~  232 (252)
                      ...+.                                               ..........+..+.+|+.+||+.||.+
T Consensus       250 ~~~~~-----------------------------------------------~~~~~~~~~~~~~~~~li~~~l~~~P~~  282 (332)
T cd07857         250 PNIPK-----------------------------------------------KPFESIFPNANPLALDLLEKLLAFDPTK  282 (332)
T ss_pred             cccCC-----------------------------------------------cchHhhCCCCCHHHHHHHHHHccCCccc
Confidence            00000                                               0000111234568999999999999999


Q ss_pred             CCCHHHHHcCCCCCCc
Q 025467          233 RLTAREALRHPFFTRD  248 (252)
Q Consensus       233 R~ta~e~l~hpwf~~~  248 (252)
                      |||+.+++.||||..-
T Consensus       283 R~t~~~ll~~~~~~~~  298 (332)
T cd07857         283 RISVEEALEHPYLAIW  298 (332)
T ss_pred             CCCHHHHhcChhhhhh
Confidence            9999999999999754

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co

>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1

Probab=99.96  E-value=2.4e-29  Score=212.30  Aligned_cols=122  Identities=29%  Similarity=0.385  Sum_probs=82.5

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccc------------cCC
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTY------------ERP   68 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~------------~~~   68 (252)
                      ||+|||++||+||||||+|||++.++.++++|||++............... ......++.....            ...
T Consensus       113 aL~~lH~~givHrDlKp~NILi~~~~~vkL~DFGla~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~  191 (363)
T cd05628         113 AIDSIHQLGFIHRDIKPDNLLLDSKGHVKLSDFGLCTGLKKAHRTEFYRNL-NHSLPSDFTFQNMNSKRKAETWKRNRRQ  191 (363)
T ss_pred             HHHHHHhCCeEecCCCHHHeEECCCCCEEEeeccCcccccccccccccccc-cccccccccccccccccccchhhhcccc
Confidence            689999999999999999999988888888888887543221100000000 0000001110000            000


Q ss_pred             CCCccccCCCcccchhhhcCCCCccchhHhHHHHHHHHHhCCCCCCCCChHHHHH
Q 025467           69 DQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLA  123 (252)
Q Consensus        69 ~~~~~~~t~~y~aPE~l~~~~~~~~~Diws~G~~l~~l~~g~~pf~~~~~~~~~~  123 (252)
                      .....+||+.|+|||++.+..++.++||||+||++|+|++|..||.+.+..+...
T Consensus       192 ~~~~~~Gt~~Y~aPE~~~~~~~~~~~DvwSlGvil~ell~G~~Pf~~~~~~~~~~  246 (363)
T cd05628         192 LAFSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYPPFCSETPQETYK  246 (363)
T ss_pred             ccccccCCccccCHHHHcCCCCCCchhhhhhHHHHHHHHhCCCCCCCCCHHHHHH
Confidence            0112478999999999998889999999999999999999999998766544433

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus

>PLN00034 mitogen-activated protein kinase kinase; Provisional

Probab=99.96  E-value=2.3e-29  Score=211.71  Aligned_cols=149  Identities=27%  Similarity=0.419  Sum_probs=105.1

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCC---CCccccCC
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD---QNYIVSTR   77 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~---~~~~~~t~   77 (252)
                      ||+|||++||+||||||+|||++.+                           ..++|+|||++......   .....||.
T Consensus       180 aL~~LH~~~ivHrDlkp~NIll~~~---------------------------~~~kL~DfG~~~~~~~~~~~~~~~~gt~  232 (353)
T PLN00034        180 GIAYLHRRHIVHRDIKPSNLLINSA---------------------------KNVKIADFGVSRILAQTMDPCNSSVGTI  232 (353)
T ss_pred             HHHHHHHCCEeecCCCHHHEEEcCC---------------------------CCEEEcccccceecccccccccccccCc
Confidence            6899999999999999999999544                           45666777766543221   12346899


Q ss_pred             Ccccchhhhc-----CCCCccchhHhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHHHHHHhhcCC
Q 025467           78 HYRAPEVILG-----LGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGR  152 (252)
Q Consensus        78 ~y~aPE~l~~-----~~~~~~~Diws~G~~l~~l~~g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~  152 (252)
                      .|+|||++..     ...+.++|||||||++|++++|+.||......+....+..+..                   ...
T Consensus       233 ~y~aPE~~~~~~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~-------------------~~~  293 (353)
T PLN00034        233 AYMSPERINTDLNHGAYDGYAGDIWSLGVSILEFYLGRFPFGVGRQGDWASLMCAICM-------------------SQP  293 (353)
T ss_pred             cccCccccccccccCcCCCcchhHHHHHHHHHHHHhCCCCCCCCCCccHHHHHHHHhc-------------------cCC
Confidence            9999998743     1235689999999999999999999973322111111100000                   000


Q ss_pred             CCCCccccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCC
Q 025467          153 LDWPEGAASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTD  232 (252)
Q Consensus       153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~  232 (252)
                                                                             .......+.++.+||.+||+.||++
T Consensus       294 -------------------------------------------------------~~~~~~~~~~l~~li~~~l~~~P~~  318 (353)
T PLN00034        294 -------------------------------------------------------PEAPATASREFRHFISCCLQREPAK  318 (353)
T ss_pred             -------------------------------------------------------CCCCCccCHHHHHHHHHHccCChhh
Confidence                                                                   0001234568999999999999999


Q ss_pred             CCCHHHHHcCCCCCCccc
Q 025467          233 RLTAREALRHPFFTRDHL  250 (252)
Q Consensus       233 R~ta~e~l~hpwf~~~~~  250 (252)
                      |||+.|+|+||||.+...
T Consensus       319 Rpt~~ell~hp~~~~~~~  336 (353)
T PLN00034        319 RWSAMQLLQHPFILRAQP  336 (353)
T ss_pred             CcCHHHHhcCcccccCCc
Confidence            999999999999998754

>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2

Probab=99.96  E-value=1.9e-29  Score=210.38  Aligned_cols=147  Identities=31%  Similarity=0.453  Sum_probs=105.9

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCC----CCccccC
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD----QNYIVST   76 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~----~~~~~~t   76 (252)
                      ||+|||++||+||||||+|||++.                           .+.++|+|||++......    .....||
T Consensus       117 ~l~~lH~~~ivHrDlkp~Nili~~---------------------------~~~~kl~DfG~~~~~~~~~~~~~~~~~gt  169 (332)
T cd05614         117 ALEHLHKLGIVYRDIKLENILLDS---------------------------EGHVVLTDFGLSKEFLSEEKERTYSFCGT  169 (332)
T ss_pred             HHHHHHHCCcEecCCCHHHeEECC---------------------------CCCEEEeeCcCCccccccCCCccccccCC
Confidence            689999999999999999999954                           345677777766543221    1124689


Q ss_pred             CCcccchhhhcC-CCCccchhHhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHHHHHHhhcCCCCC
Q 025467           77 RHYRAPEVILGL-GWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDW  155 (252)
Q Consensus        77 ~~y~aPE~l~~~-~~~~~~Diws~G~~l~~l~~g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~  155 (252)
                      +.|+|||++.+. .++.++||||+||++|+|++|..||...........+...                   ......  
T Consensus       170 ~~y~aPE~~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~-------------------~~~~~~--  228 (332)
T cd05614         170 IEYMAPEIIRGKGGHGKAVDWWSLGILIFELLTGASPFTLEGERNTQSEVSRR-------------------ILKCDP--  228 (332)
T ss_pred             ccccCHHHhcCCCCCCCccccccchhhhhhhhcCCCCCCCCCCCCCHHHHHHH-------------------HhcCCC--
Confidence            999999999865 4788999999999999999999999643221111100000                   000000  


Q ss_pred             CccccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCCCC-
Q 025467          156 PEGAASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRL-  234 (252)
Q Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~-  234 (252)
                                                                           ......+..+.+|+.+||+.||++|+ 
T Consensus       229 -----------------------------------------------------~~~~~~~~~~~~li~~~l~~dp~~R~~  255 (332)
T cd05614         229 -----------------------------------------------------PFPSFIGPEAQDLLHKLLRKDPKKRLG  255 (332)
T ss_pred             -----------------------------------------------------CCCCCCCHHHHHHHHHHcCCCHHHcCC
Confidence                                                                 00123456889999999999999999 


Q ss_pred             ----CHHHHHcCCCCCCc
Q 025467          235 ----TAREALRHPFFTRD  248 (252)
Q Consensus       235 ----ta~e~l~hpwf~~~  248 (252)
                          +++++++||||+..
T Consensus       256 ~~~~~~~~~l~h~~~~~~  273 (332)
T cd05614         256 AGPQGASEIKEHPFFKGL  273 (332)
T ss_pred             CCCCCHHHHHcCCCcCCC
Confidence                89999999999864

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase

Probab=99.96  E-value=1.4e-29  Score=210.46  Aligned_cols=143  Identities=31%  Similarity=0.446  Sum_probs=109.1

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCC---CCCccccCC
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERP---DQNYIVSTR   77 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~---~~~~~~~t~   77 (252)
                      ||+|||++||+||||||+|||++.                           ++.++|+|||++.....   ......||+
T Consensus       108 ~l~~lH~~givH~dikp~NIll~~---------------------------~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~  160 (323)
T cd05575         108 ALGYLHSLNIIYRDLKPENILLDS---------------------------QGHVVLTDFGLCKEGIEHSKTTSTFCGTP  160 (323)
T ss_pred             HHHHHHHCCeEeCCCCHHHeEECC---------------------------CCcEEEeccCCCcccccCCCccccccCCh
Confidence            689999999999999999999944                           44567777777653211   122346899


Q ss_pred             CcccchhhhcCCCCccchhHhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHHHHHHhhcCCCCCCc
Q 025467           78 HYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPE  157 (252)
Q Consensus        78 ~y~aPE~l~~~~~~~~~Diws~G~~l~~l~~g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~  157 (252)
                      .|+|||++.+..++.++||||+||++|+|++|..||.+.+..+....+..                       +....  
T Consensus       161 ~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~i~~-----------------------~~~~~--  215 (323)
T cd05575         161 EYLAPEVLRKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRDTAEMYDNILN-----------------------KPLRL--  215 (323)
T ss_pred             hhcChhhhcCCCCCccccccccchhhhhhhcCCCCCCCCCHHHHHHHHHc-----------------------CCCCC--
Confidence            99999999988899999999999999999999999987654333222211                       00000  


Q ss_pred             cccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCCCCCH-
Q 025467          158 GAASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTA-  236 (252)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~ta-  236 (252)
                                                                           ....+..+.+||.+||+.||.+|+|+ 
T Consensus       216 -----------------------------------------------------~~~~~~~~~~li~~~l~~~p~~R~~~~  242 (323)
T cd05575         216 -----------------------------------------------------KPNISVSARHLLEGLLQKDRTKRLGAK  242 (323)
T ss_pred             -----------------------------------------------------CCCCCHHHHHHHHHHhhcCHHhCCCCC
Confidence                                                                 01235688999999999999999997 


Q ss_pred             ---HHHHcCCCCCCc
Q 025467          237 ---REALRHPFFTRD  248 (252)
Q Consensus       237 ---~e~l~hpwf~~~  248 (252)
                         .++++||||...
T Consensus       243 ~~~~~il~~~~~~~~  257 (323)
T cd05575         243 DDFLEIKNHVFFSSI  257 (323)
T ss_pred             CCHHHHHcCCCcCCC
Confidence               699999999764

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr

>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1

Probab=99.96  E-value=3.4e-29  Score=204.13  Aligned_cols=147  Identities=22%  Similarity=0.360  Sum_probs=108.3

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCC---CCccccCC
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD---QNYIVSTR   77 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~---~~~~~~t~   77 (252)
                      ||+|||++||+||||||+||+++.                           .+.++|+|||.+......   .....||+
T Consensus       109 ~l~~lH~~~i~H~dlkp~Nili~~---------------------------~~~~~l~dfg~~~~~~~~~~~~~~~~g~~  161 (280)
T cd05608         109 GLEHLHQRRIIYRDLKPENVLLDN---------------------------DGNVRISDLGLAVELKDGQSKTKGYAGTP  161 (280)
T ss_pred             HHHHHHHCCcccCCCCHHHEEECC---------------------------CCCEEEeeCccceecCCCCccccccCCCc
Confidence            689999999999999999999943                           445677777776543221   12246788


Q ss_pred             CcccchhhhcCCCCccchhHhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHHHHHHhhcCCCCCCc
Q 025467           78 HYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPE  157 (252)
Q Consensus        78 ~y~aPE~l~~~~~~~~~Diws~G~~l~~l~~g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~  157 (252)
                      .|+|||++.+..++.++|+||+||++|++++|..||...........+....                   .....    
T Consensus       162 ~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~-------------------~~~~~----  218 (280)
T cd05608         162 GFMAPELLQGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRI-------------------LNDSV----  218 (280)
T ss_pred             CccCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCcchhHHHHHHhh-------------------cccCC----
Confidence            9999999998889999999999999999999999997543211111000000                   00000    


Q ss_pred             cccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCCCC---
Q 025467          158 GAASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRL---  234 (252)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~---  234 (252)
                                                                         ......+.++.+|+.+||+.||++|+   
T Consensus       219 ---------------------------------------------------~~~~~~~~~~~~li~~~l~~~P~~R~~~~  247 (280)
T cd05608         219 ---------------------------------------------------TYPDKFSPASKSFCEALLAKDPEKRLGFR  247 (280)
T ss_pred             ---------------------------------------------------CCcccCCHHHHHHHHHHhcCCHHHhcCCC
Confidence                                                               00123456889999999999999999   


Q ss_pred             --CHHHHHcCCCCCCc
Q 025467          235 --TAREALRHPFFTRD  248 (252)
Q Consensus       235 --ta~e~l~hpwf~~~  248 (252)
                        |++++++||||++.
T Consensus       248 ~~~~~~~l~h~~~~~~  263 (280)
T cd05608         248 DGNCDGLRTHPLFRDL  263 (280)
T ss_pred             CCCHHHHhcChhhhcC
Confidence              89999999999875

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g

>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase

Probab=99.96  E-value=2.7e-29  Score=212.40  Aligned_cols=148  Identities=28%  Similarity=0.469  Sum_probs=110.2

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCC----CCccccC
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD----QNYIVST   76 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~----~~~~~~t   76 (252)
                      ||+|||++||+||||||+|||++.                           .+.++|+|||.+......    .....||
T Consensus       154 aL~~LH~~~ivHrDLkp~NILl~~---------------------------~~~~kL~DfG~~~~~~~~~~~~~~~~~gt  206 (370)
T cd05596         154 ALDAIHSMGFIHRDVKPDNMLLDK---------------------------SGHLKLADFGTCMKMDANGMVRCDTAVGT  206 (370)
T ss_pred             HHHHHHHCCeeccCCCHHHEEEcC---------------------------CCCEEEEeccceeeccCCCcccCCCCCCC
Confidence            689999999999999999999944                           445777777776543221    1234689


Q ss_pred             CCcccchhhhcC----CCCccchhHhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHHHHHHhhcCC
Q 025467           77 RHYRAPEVILGL----GWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGR  152 (252)
Q Consensus        77 ~~y~aPE~l~~~----~~~~~~Diws~G~~l~~l~~g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~  152 (252)
                      +.|+|||++.+.    .++.++|+||+||++|+|++|..||.+.+.......+.....                     .
T Consensus       207 ~~y~aPE~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~i~~~~~---------------------~  265 (370)
T cd05596         207 PDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMDHKN---------------------S  265 (370)
T ss_pred             cCeECHHHhccCCCCCCCCCceeeeehhHHHHHHHhCCCCcCCCCHHHHHHHHHcCCC---------------------c
Confidence            999999998753    378899999999999999999999987654333332211000                     0


Q ss_pred             CCCCccccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCC
Q 025467          153 LDWPEGAASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTD  232 (252)
Q Consensus       153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~  232 (252)
                      +.++.                                                     ....+.++.+||++||+.+|.+
T Consensus       266 ~~~~~-----------------------------------------------------~~~~s~~~~~li~~~L~~~p~r  292 (370)
T cd05596         266 LTFPD-----------------------------------------------------DIEISKQAKDLICAFLTDREVR  292 (370)
T ss_pred             CCCCC-----------------------------------------------------cCCCCHHHHHHHHHHccChhhc
Confidence            11110                                                     1234578999999999999988


Q ss_pred             --CCCHHHHHcCCCCCCcc
Q 025467          233 --RLTAREALRHPFFTRDH  249 (252)
Q Consensus       233 --R~ta~e~l~hpwf~~~~  249 (252)
                        |+|++++++||||+...
T Consensus       293 ~~R~s~~ell~h~~~~~~~  311 (370)
T cd05596         293 LGRNGVDEIKSHPFFKNDQ  311 (370)
T ss_pred             cCCCCHHHHhcCcccCCCC
Confidence              99999999999998753

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in

>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases

Probab=99.96  E-value=1.9e-29  Score=211.87  Aligned_cols=174  Identities=29%  Similarity=0.396  Sum_probs=114.9

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCc-eEEee----cCCccccCCCCCcccc
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSA-IKVID----FGSTTYERPDQNYIVS   75 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~-~~l~d----fg~~~~~~~~~~~~~~   75 (252)
                      ||+|||++||+||||||+|||++.++.+++.|||++.................. .....    ...............|
T Consensus       113 aL~~LH~~giiH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g  192 (350)
T cd05573         113 ALDSVHKLGFIHRDIKPDNILIDADGHIKLADFGLCKKMNKAKDREYYLNDSHNLLFRDNVLVRRRDHKQRRVRANSTVG  192 (350)
T ss_pred             HHHHHHHCCeeccCCCHHHeEECCCCCEEeecCCCCccCcccCccccccccccccccccccccccccccccccccccccc
Confidence            689999999999999999999988887788888776543322210000000000 00000    0000000011122468


Q ss_pred             CCCcccchhhhcCCCCccchhHhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHHHHHHhhcCCCCC
Q 025467           76 TRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDW  155 (252)
Q Consensus        76 t~~y~aPE~l~~~~~~~~~Diws~G~~l~~l~~g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~  155 (252)
                      |+.|+|||++.+..++.++||||+||++|+|++|..||...+.......+......                     +..
T Consensus       193 t~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~~~~~~~~~i~~~~~~---------------------~~~  251 (350)
T cd05573         193 TPDYIAPEVLRGTPYGLECDWWSLGVILYEMLYGFPPFYSDTLQETYNKIINWKES---------------------LRF  251 (350)
T ss_pred             CccccCHHHHcCCCCCCceeeEecchhhhhhccCCCCCCCCCHHHHHHHHhccCCc---------------------ccC
Confidence            99999999999989999999999999999999999999876644333332221000                     000


Q ss_pred             CccccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCCCCC
Q 025467          156 PEGAASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLT  235 (252)
Q Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~t  235 (252)
                      +.                                                     ....++++.+||.+||. ||.+|++
T Consensus       252 p~-----------------------------------------------------~~~~~~~~~~li~~ll~-dp~~R~~  277 (350)
T cd05573         252 PP-----------------------------------------------------DPPVSPEAIDLICRLLC-DPEDRLG  277 (350)
T ss_pred             CC-----------------------------------------------------CCCCCHHHHHHHHHHcc-ChhhcCC
Confidence            00                                                     01145689999999998 9999999


Q ss_pred             -HHHHHcCCCCCCcc
Q 025467          236 -AREALRHPFFTRDH  249 (252)
Q Consensus       236 -a~e~l~hpwf~~~~  249 (252)
                       ++++++||||+...
T Consensus       278 s~~~ll~hp~~~~~~  292 (350)
T cd05573         278 SFEEIKSHPFFKGID  292 (350)
T ss_pred             CHHHHhcCCCcCCCC
Confidence             99999999998753

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the

>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases

Probab=99.96  E-value=1e-28  Score=206.41  Aligned_cols=173  Identities=34%  Similarity=0.588  Sum_probs=119.6

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCC------CCccc
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD------QNYIV   74 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~------~~~~~   74 (252)
                      ||+|||++||+||||||+||+++.++.                           ++++|||++......      .....
T Consensus       118 aL~~LH~~~ivH~dlkp~Nill~~~~~---------------------------~kl~dfg~~~~~~~~~~~~~~~~~~~  170 (336)
T cd07849         118 GLKYIHSANVLHRDLKPSNLLLNTNCD---------------------------LKICDFGLARIADPEHDHTGFLTEYV  170 (336)
T ss_pred             HHHHHHhCCeeccCCCHHHEEECCCCC---------------------------EEECcccceeeccccccccCCcCCcC
Confidence            689999999999999999999955444                           555555554432111      11236


Q ss_pred             cCCCcccchhhhc-CCCCccchhHhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHH-HHHHhhcCC
Q 025467           75 STRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRH-AEKYVRRGR  152 (252)
Q Consensus        75 ~t~~y~aPE~l~~-~~~~~~~Diws~G~~l~~l~~g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~-~~~~~~~~~  152 (252)
                      |+..|+|||.+.+ ..++.++|+||+||++|++++|+.||.+.+....+..+...++.++.+........ ...+.....
T Consensus       171 ~~~~y~aPE~~~~~~~~~~~~DvwslGvil~el~~G~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  250 (336)
T cd07849         171 ATRWYRAPEIMLNSKGYTKAIDIWSVGCILAEMLSNRPLFPGKDYLHQLNLILGVLGTPSQEDLNCIISLRARNYIKSLP  250 (336)
T ss_pred             cCCCccChHHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCCHHHHHHhhchhhhhHHhhcC
Confidence            7888999998765 45789999999999999999999999887777777778887876654433222111 111110000


Q ss_pred             CCCCccccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCC
Q 025467          153 LDWPEGAASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTD  232 (252)
Q Consensus       153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~  232 (252)
                      .. +                .                               ..........+.++.+|+.+||+.||++
T Consensus       251 ~~-~----------------~-------------------------------~~~~~~~~~~~~~~~~li~~~l~~dP~~  282 (336)
T cd07849         251 FK-P----------------K-------------------------------VPWNKLFPNADPKALDLLDKMLTFNPHK  282 (336)
T ss_pred             cC-C----------------c-------------------------------ccHHHHhcccCcHHHHHHHHHcCCChhh
Confidence            00 0                0                               0000001234678999999999999999


Q ss_pred             CCCHHHHHcCCCCCCc
Q 025467          233 RLTAREALRHPFFTRD  248 (252)
Q Consensus       233 R~ta~e~l~hpwf~~~  248 (252)
                      |||+.++++||||+..
T Consensus       283 Rpt~~e~l~hp~~~~~  298 (336)
T cd07849         283 RITVEEALAHPYLEQY  298 (336)
T ss_pred             CcCHHHHhcCcccccc
Confidence            9999999999999754

Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase

>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota

Probab=99.96  E-value=2.9e-29  Score=209.06  Aligned_cols=87  Identities=30%  Similarity=0.555  Sum_probs=72.3

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCC---CCCccccCC
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERP---DQNYIVSTR   77 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~---~~~~~~~t~   77 (252)
                      ||+|||++||+||||||+||+++.                           ++.++|+|||++.....   ......||.
T Consensus       108 ~l~~lH~~~ivH~Dikp~Nili~~---------------------------~~~~kL~DfG~~~~~~~~~~~~~~~~gt~  160 (329)
T cd05618         108 ALNYLHERGIIYRDLKLDNVLLDS---------------------------EGHIKLTDYGMCKEGLRPGDTTSTFCGTP  160 (329)
T ss_pred             HHHHHHHCCeeeCCCCHHHEEECC---------------------------CCCEEEeeCCccccccCCCCccccccCCc
Confidence            689999999999999999999944                           44577777777653211   122346899


Q ss_pred             CcccchhhhcCCCCccchhHhHHHHHHHHHhCCCCCC
Q 025467           78 HYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQ  114 (252)
Q Consensus        78 ~y~aPE~l~~~~~~~~~Diws~G~~l~~l~~g~~pf~  114 (252)
                      .|+|||++.+..++.++|+||+||++|+|++|..||.
T Consensus       161 ~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~  197 (329)
T cd05618         161 NYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFD  197 (329)
T ss_pred             cccCHHHHcCCCCCCccceecccHHHHHHhhCCCCCc
Confidence            9999999998889999999999999999999999995

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o

>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases

Probab=99.96  E-value=8.3e-30  Score=212.47  Aligned_cols=144  Identities=31%  Similarity=0.579  Sum_probs=107.5

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCC---CCCccccCC
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERP---DQNYIVSTR   77 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~---~~~~~~~t~   77 (252)
                      ||+|||++||+||||||+|||++.                           ++.++|+|||++.....   ......||.
T Consensus       108 al~~LH~~~ivHrDlkp~Nili~~---------------------------~~~~kl~Dfg~a~~~~~~~~~~~~~~gt~  160 (330)
T cd05586         108 ALEHLHKYDIVYRDLKPENILLDA---------------------------TGHIALCDFGLSKANLTDNKTTNTFCGTT  160 (330)
T ss_pred             HHHHHHHCCeEeccCCHHHeEECC---------------------------CCCEEEecCCcCcCCCCCCCCccCccCCc
Confidence            689999999999999999999954                           44567777777653211   112346899


Q ss_pred             CcccchhhhcC-CCCccchhHhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHHHHHHhhcCCCCCC
Q 025467           78 HYRAPEVILGL-GWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWP  156 (252)
Q Consensus        78 ~y~aPE~l~~~-~~~~~~Diws~G~~l~~l~~g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~  156 (252)
                      .|+|||++.+. .++.++||||+||++|+|++|..||.+.+.......+..                       +....+
T Consensus       161 ~y~aPE~~~~~~~~~~~~DvwslGvil~elltG~~Pf~~~~~~~~~~~i~~-----------------------~~~~~~  217 (330)
T cd05586         161 EYLAPEVLLDEKGYTKHVDFWSLGVLVFEMCCGWSPFYAEDTQQMYRNIAF-----------------------GKVRFP  217 (330)
T ss_pred             cccCHHHHcCCCCCCCccceeccccEEEEeccCCCCCCCCCHHHHHHHHHc-----------------------CCCCCC
Confidence            99999998764 478999999999999999999999987554332222111                       001111


Q ss_pred             ccccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCCCC--
Q 025467          157 EGAASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRL--  234 (252)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~--  234 (252)
                      .                                                      ...++++.+|+++||+.||.+||  
T Consensus       218 ~------------------------------------------------------~~~~~~~~~li~~~L~~~P~~R~~~  243 (330)
T cd05586         218 K------------------------------------------------------NVLSDEGRQFVKGLLNRNPQHRLGA  243 (330)
T ss_pred             C------------------------------------------------------ccCCHHHHHHHHHHcCCCHHHCCCC
Confidence            0                                                      12346889999999999999998  


Q ss_pred             --CHHHHHcCCCCCCc
Q 025467          235 --TAREALRHPFFTRD  248 (252)
Q Consensus       235 --ta~e~l~hpwf~~~  248 (252)
                        ++.++++||||...
T Consensus       244 ~~~~~~ll~h~~~~~~  259 (330)
T cd05586         244 HRDAVELKEHPFFADI  259 (330)
T ss_pred             CCCHHHHhcCccccCC
Confidence              79999999999864

Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of

>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase

Probab=99.96  E-value=1.6e-28  Score=205.95  Aligned_cols=173  Identities=31%  Similarity=0.599  Sum_probs=124.8

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCCCccccCCCcc
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYR   80 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~~~~~~t~~y~   80 (252)
                      ||+|||++||+||||||+||+++.                           .+.++++|||.+...........++..|+
T Consensus       132 aL~~LH~~~ivH~dlkp~NIll~~---------------------------~~~~kl~dfg~~~~~~~~~~~~~~~~~y~  184 (345)
T cd07877         132 GLKYIHSADIIHRDLKPSNLAVNE---------------------------DCELKILDFGLARHTDDEMTGYVATRWYR  184 (345)
T ss_pred             HHHHHHHCCeeecCCChHHEEEcC---------------------------CCCEEEecccccccccccccccccCCCcc
Confidence            689999999999999999999954                           34567777777665443333346788899


Q ss_pred             cchhhhc-CCCCccchhHhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHHH-HHHhhcCCCCCCcc
Q 025467           81 APEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHA-EKYVRRGRLDWPEG  158 (252)
Q Consensus        81 aPE~l~~-~~~~~~~Diws~G~~l~~l~~g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~-~~~~~~~~~~~~~~  158 (252)
                      |||.+.+ ..++.++|+||+||+++++++|..||...+....+..+....+..+......+.... ..+...        
T Consensus       185 aPE~~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------  256 (345)
T cd07877         185 APEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQS--------  256 (345)
T ss_pred             CHHHHhCccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHhhcccHhHHHHHHH--------
Confidence            9999876 467889999999999999999999998877777777777777777666554433211 011000        


Q ss_pred             ccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCCCCCHHH
Q 025467          159 AASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTARE  238 (252)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~ta~e  238 (252)
                               ....+..                               .........+..+.+||.+||+.||.+|+|+.+
T Consensus       257 ---------~~~~~~~-------------------------------~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e  296 (345)
T cd07877         257 ---------LTQMPKM-------------------------------NFANVFIGANPLAVDLLEKMLVLDSDKRITAAQ  296 (345)
T ss_pred             ---------hcccCCc-------------------------------chhhhcCCCCHHHHHHHHHHcCCChhhcCCHHH
Confidence                     0000000                               000111234568899999999999999999999


Q ss_pred             HHcCCCCCCc
Q 025467          239 ALRHPFFTRD  248 (252)
Q Consensus       239 ~l~hpwf~~~  248 (252)
                      ++.||||..-
T Consensus       297 ~l~h~~f~~~  306 (345)
T cd07877         297 ALAHAYFAQY  306 (345)
T ss_pred             HhcChhhhhc
Confidence            9999999853

Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14

>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3

Probab=99.96  E-value=1.6e-28  Score=200.27  Aligned_cols=169  Identities=34%  Similarity=0.554  Sum_probs=120.1

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCC---CccccCC
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ---NYIVSTR   77 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~---~~~~~t~   77 (252)
                      ||+|||++|++|+||+|+||+++.+                           +.++++|||.+.......   ....++.
T Consensus       112 ~l~~lh~~~i~H~~l~p~nill~~~---------------------------~~~~l~dfg~~~~~~~~~~~~~~~~~~~  164 (284)
T cd07860         112 GLAFCHSHRVLHRDLKPQNLLINTE---------------------------GAIKLADFGLARAFGVPVRTYTHEVVTL  164 (284)
T ss_pred             HHHHHHHCCeecCCCCHHHEEECCC---------------------------CCEEEeeccchhhcccCccccccccccc
Confidence            6899999999999999999999543                           456777777654332211   1224577


Q ss_pred             CcccchhhhcCC-CCccchhHhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHHHHHHhhcCCCCCC
Q 025467           78 HYRAPEVILGLG-WTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWP  156 (252)
Q Consensus        78 ~y~aPE~l~~~~-~~~~~Diws~G~~l~~l~~g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~  156 (252)
                      .|+|||.+.+.. ++.++|+||+||++|++++|..||.+.++.....++....+.++...+............     ++
T Consensus       165 ~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~  239 (284)
T cd07860         165 WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSLPDYKPS-----FP  239 (284)
T ss_pred             cccCCeEEecCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCChhhhhhhhHHHHHHhh-----cc
Confidence            899999887654 578899999999999999999999988887788888888887765544333221111100     00


Q ss_pred             ccccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCCCCCH
Q 025467          157 EGAASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTA  236 (252)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~ta  236 (252)
                      ..  .                                          ...........+..++++|.+||+.||.+|||+
T Consensus       240 ~~--~------------------------------------------~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~  275 (284)
T cd07860         240 KW--A------------------------------------------RQDFSKVVPPLDEDGRDLLSQMLHYDPNKRISA  275 (284)
T ss_pred             cc--c------------------------------------------ccCHHHHcccCCHHHHHHHHHhcCCCcccCCCH
Confidence            00  0                                          000001112345678999999999999999999


Q ss_pred             HHHHcCCCC
Q 025467          237 REALRHPFF  245 (252)
Q Consensus       237 ~e~l~hpwf  245 (252)
                      +++++||||
T Consensus       276 ~~~l~~~~f  284 (284)
T cd07860         276 KAALAHPFF  284 (284)
T ss_pred             HHHhcCCCC
Confidence            999999998

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex

>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C

Probab=99.96  E-value=3.8e-29  Score=208.37  Aligned_cols=88  Identities=28%  Similarity=0.547  Sum_probs=72.3

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccC---CCCCccccCC
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYER---PDQNYIVSTR   77 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~---~~~~~~~~t~   77 (252)
                      ||+|||++||+||||||+|||++.                           .+.++|+|||++....   ......+||+
T Consensus       108 ~l~~lH~~~ivH~dlkp~Nili~~---------------------------~~~~kL~Dfg~~~~~~~~~~~~~~~~gt~  160 (329)
T cd05588         108 ALNFLHERGIIYRDLKLDNVLLDA---------------------------EGHIKLTDYGMCKEGIRPGDTTSTFCGTP  160 (329)
T ss_pred             HHHHHHHCCeEecCCCHHHeEECC---------------------------CCCEEECcCccccccccCCCccccccCCc
Confidence            689999999999999999999954                           4456777777665321   1122347899


Q ss_pred             CcccchhhhcCCCCccchhHhHHHHHHHHHhCCCCCCC
Q 025467           78 HYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQT  115 (252)
Q Consensus        78 ~y~aPE~l~~~~~~~~~Diws~G~~l~~l~~g~~pf~~  115 (252)
                      .|+|||++.+..++.++|+||+||++|++++|..||..
T Consensus       161 ~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~  198 (329)
T cd05588         161 NYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDI  198 (329)
T ss_pred             cccCHHHHcCCCCCCccceechHHHHHHHHHCCCCccc
Confidence            99999999988899999999999999999999999963

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl

>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10

Probab=99.96  E-value=7.2e-29  Score=204.91  Aligned_cols=174  Identities=30%  Similarity=0.487  Sum_probs=121.4

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCC---CCccccCC
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD---QNYIVSTR   77 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~---~~~~~~t~   77 (252)
                      ||+|||+.|++||||||+||+++.++                           .++|+|||.+......   .....++.
T Consensus       120 ~l~~lH~~~i~H~dl~p~nil~~~~~---------------------------~~kL~dfg~~~~~~~~~~~~~~~~~~~  172 (309)
T cd07845         120 GLQYLHENFIIHRDLKVSNLLLTDKG---------------------------CLKIADFGLARTYGLPAKPMTPKVVTL  172 (309)
T ss_pred             HHHHHHhCCeecCCCCHHHEEECCCC---------------------------CEEECccceeeecCCccCCCCcccccc
Confidence            68999999999999999999995444                           4566666665543221   11124567


Q ss_pred             CcccchhhhcC-CCCccchhHhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHHHHHHhhcCCCCCC
Q 025467           78 HYRAPEVILGL-GWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWP  156 (252)
Q Consensus        78 ~y~aPE~l~~~-~~~~~~Diws~G~~l~~l~~g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~  156 (252)
                      .|+|||.+.+. .++.++|+||+||++|++++|..||.+.+..+.+..+....+..+..++.......    ..+....+
T Consensus       173 ~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~  248 (309)
T cd07845         173 WYRAPELLLGCTTYTTAIDMWAVGCILAELLAHKPLLPGKSEIEQLDLIIQLLGTPNESIWPGFSDLP----LVGKFTLP  248 (309)
T ss_pred             cccChhhhcCCCCcCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCChhhchhhhccc----cccccccc
Confidence            89999998764 57899999999999999999999999888888888888877766554432221100    00000000


Q ss_pred             ccccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCCCCCH
Q 025467          157 EGAASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTA  236 (252)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~ta  236 (252)
                      ...                                       ..     .........+..+.+||.+||++||++|||+
T Consensus       249 ~~~---------------------------------------~~-----~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~  284 (309)
T cd07845         249 KQP---------------------------------------YN-----NLKHKFPWLSEAGLRLLNFLLMYDPKKRATA  284 (309)
T ss_pred             CCC---------------------------------------CC-----chHHhccccCHHHHHHHHHHhcCChhhCcCH
Confidence            000                                       00     0000012246788999999999999999999


Q ss_pred             HHHHcCCCCCCcc
Q 025467          237 REALRHPFFTRDH  249 (252)
Q Consensus       237 ~e~l~hpwf~~~~  249 (252)
                      +++++||||++.+
T Consensus       285 ~~il~h~~f~~~~  297 (309)
T cd07845         285 EEALESSYFKEKP  297 (309)
T ss_pred             HHHhcChhhccCC
Confidence            9999999998654

Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing

>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]

Probab=99.96  E-value=4e-29  Score=202.14  Aligned_cols=155  Identities=29%  Similarity=0.523  Sum_probs=121.1

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCC--CccccCCC
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ--NYIVSTRH   78 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~--~~~~~t~~   78 (252)
                      ||++||+++||||||||.|||++.....                     +....+||+|||+|+...+..  ...+|++.
T Consensus       121 alq~L~~~~IiHRDLKPQNiLLs~~~~~---------------------~~~~~LKIADFGfAR~L~~~~~a~tlcGSpl  179 (429)
T KOG0595|consen  121 ALQFLHENNIIHRDLKPQNILLSTTARN---------------------DTSPVLKIADFGFARFLQPGSMAETLCGSPL  179 (429)
T ss_pred             HHHHHHHCCeeeccCCcceEEeccCCCC---------------------CCCceEEecccchhhhCCchhHHHHhhCCcc
Confidence            6899999999999999999999764210                     112678999999999877654  23689999


Q ss_pred             cccchhhhcCCCCccchhHhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHHHHHHhhcCCCCCCcc
Q 025467           79 YRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEG  158 (252)
Q Consensus        79 y~aPE~l~~~~~~~~~Diws~G~~l~~l~~g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~  158 (252)
                      |||||++....|+-++|+||+|+++|++++|+.||...+..+.+..+.+....+|                         
T Consensus       180 YMAPEV~~~~~YdAKADLWSiG~Ilyq~l~g~~Pf~a~t~~eL~~~~~k~~~~~~-------------------------  234 (429)
T KOG0595|consen  180 YMAPEVIMSQQYDAKADLWSIGTILYQCLTGKPPFDAETPKELLLYIKKGNEIVP-------------------------  234 (429)
T ss_pred             ccCHHHHHhccccchhhHHHHHHHHHHHHhCCCCccccCHHHHHHHHhccccccC-------------------------
Confidence            9999999999999999999999999999999999998877665553322211111                         


Q ss_pred             ccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCCCCCHHH
Q 025467          159 AASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTARE  238 (252)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~ta~e  238 (252)
                                                                        ......+....+|+...|..+|..|.+..+
T Consensus       235 --------------------------------------------------~~~~~~s~~~~~Ll~~ll~~~~~~~~~~~~  264 (429)
T KOG0595|consen  235 --------------------------------------------------VLPAELSNPLRELLISLLQRNPKDRISFED  264 (429)
T ss_pred             --------------------------------------------------chhhhccCchhhhhhHHHhcCccccCchHH
Confidence                                                              001223346678899999999999999999


Q ss_pred             HHcCCCCCCcccc
Q 025467          239 ALRHPFFTRDHLR  251 (252)
Q Consensus       239 ~l~hpwf~~~~~~  251 (252)
                      -+.|++....+.+
T Consensus       265 ~~~~~~l~~~p~~  277 (429)
T KOG0595|consen  265 FFDHPFLAANPQD  277 (429)
T ss_pred             hhhhhhcccCccc
Confidence            9999998877653

>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5

Probab=99.96  E-value=1.2e-28  Score=205.76  Aligned_cols=175  Identities=31%  Similarity=0.545  Sum_probs=125.4

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCC-------Ccc
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ-------NYI   73 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~-------~~~   73 (252)
                      ||+|||++||+||||||+||+++.++                           .++|+|||.+.......       ...
T Consensus       119 aL~~LH~~~ivH~dlkp~Nil~~~~~---------------------------~~kl~dfg~~~~~~~~~~~~~~~~~~~  171 (334)
T cd07855         119 GLKYIHSANVIHRDLKPSNLLVNEDC---------------------------ELRIGDFGMARGLSSSPTEHKYFMTEY  171 (334)
T ss_pred             HHHHHHHCCeecCCCCHHHEEEcCCC---------------------------cEEecccccceeecccCcCCCcccccc
Confidence            68999999999999999999995544                           45666666554322111       123


Q ss_pred             ccCCCcccchhhhcC-CCCccchhHhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHH-HHHHhhcC
Q 025467           74 VSTRHYRAPEVILGL-GWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRH-AEKYVRRG  151 (252)
Q Consensus        74 ~~t~~y~aPE~l~~~-~~~~~~Diws~G~~l~~l~~g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~-~~~~~~~~  151 (252)
                      .++..|+|||.+.+. .++.++|+||+||++|+|++|+.||.+.+....+..+....|.+|.......... .......-
T Consensus       172 ~~~~~y~~PE~~~~~~~~~~~~Di~slG~~l~el~~g~~pf~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~  251 (334)
T cd07855         172 VATRWYRAPELLLSLPEYTTAIDMWSVGCIFAEMLGRRQLFPGKNYVHQLKLILSVLGSPSEEVLNRIGSDRVRKYIQNL  251 (334)
T ss_pred             cccccccChHHhcCCcccccccchHHHHHHHHHHHcCCCccCCCChHHHHHHHHHHhCCChhHhhhhhchhhHHHHHhhc
Confidence            678889999998663 5789999999999999999999999988888888888888898887765443321 11111100


Q ss_pred             CCCCCccccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCC
Q 025467          152 RLDWPEGAASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPT  231 (252)
Q Consensus       152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~  231 (252)
                      .. ...                                               ..........+..+.+++++||+.||+
T Consensus       252 ~~-~~~-----------------------------------------------~~~~~~~~~~~~~~~~li~~~l~~~P~  283 (334)
T cd07855         252 PR-KQP-----------------------------------------------VPWSKIFPKASPEALDLLSQMLQFDPE  283 (334)
T ss_pred             cc-CCC-----------------------------------------------CCHHHHcccCCHHHHHHHHHHccCChh
Confidence            00 000                                               000011123467899999999999999


Q ss_pred             CCCCHHHHHcCCCCCCccc
Q 025467          232 DRLTAREALRHPFFTRDHL  250 (252)
Q Consensus       232 ~R~ta~e~l~hpwf~~~~~  250 (252)
                      +|||+++++.||||...+.
T Consensus       284 ~Rpt~~~~l~~~~~~~~~~  302 (334)
T cd07855         284 ERITVEQALQHPFLAQYHD  302 (334)
T ss_pred             hCcCHHHHHhChhhhhccC
Confidence            9999999999999986543

Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the

>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2

Probab=99.96  E-value=5.8e-29  Score=210.27  Aligned_cols=147  Identities=29%  Similarity=0.512  Sum_probs=108.1

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCC----CccccC
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ----NYIVST   76 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~----~~~~~t   76 (252)
                      ||+|||++||+||||||+|||++                           ..+.++|+|||++.......    ...+||
T Consensus       154 aL~~LH~~~IvHrDLKp~NILl~---------------------------~~~~~kL~DFG~a~~~~~~~~~~~~~~~gt  206 (370)
T cd05621         154 ALDAIHSMGLIHRDVKPDNMLLD---------------------------KHGHLKLADFGTCMKMDETGMVRCDTAVGT  206 (370)
T ss_pred             HHHHHHHCCeEecCCCHHHEEEC---------------------------CCCCEEEEecccceecccCCceecccCCCC
Confidence            68999999999999999999994                           34457788888776433221    234689


Q ss_pred             CCcccchhhhcCC----CCccchhHhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHHHHHHhhcCC
Q 025467           77 RHYRAPEVILGLG----WTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGR  152 (252)
Q Consensus        77 ~~y~aPE~l~~~~----~~~~~Diws~G~~l~~l~~g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~  152 (252)
                      +.|+|||++.+..    ++.++|+||+||++|+|++|..||.+.+.......+.....                     .
T Consensus       207 ~~Y~aPE~~~~~~~~~~~~~~~DiwSlG~ilyell~G~~Pf~~~~~~~~~~~i~~~~~---------------------~  265 (370)
T cd05621         207 PDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYADSLVGTYSKIMDHKN---------------------S  265 (370)
T ss_pred             cccCCHHHHhccCCCCCCCcccCEEeehHHHHHHHhCCCCCCCCCHHHHHHHHHhCCc---------------------c
Confidence            9999999997643    77899999999999999999999987655443333221110                     1


Q ss_pred             CCCCccccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCC
Q 025467          153 LDWPEGAASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTD  232 (252)
Q Consensus       153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~  232 (252)
                      +.++.                                                     ....+..+++++.+||+.++.+
T Consensus       266 ~~~p~-----------------------------------------------------~~~~s~~~~~li~~~L~~~~~r  292 (370)
T cd05621         266 LNFPE-----------------------------------------------------DVEISKHAKNLICAFLTDREVR  292 (370)
T ss_pred             cCCCC-----------------------------------------------------cccCCHHHHHHHHHHccCchhc
Confidence            11111                                                     1224568899999999865544


Q ss_pred             --CCCHHHHHcCCCCCCc
Q 025467          233 --RLTAREALRHPFFTRD  248 (252)
Q Consensus       233 --R~ta~e~l~hpwf~~~  248 (252)
                        |+|+.|+++||||+..
T Consensus       293 ~~R~~~~e~l~hp~~~~~  310 (370)
T cd05621         293 LGRNGVEEIKQHPFFKND  310 (370)
T ss_pred             cCCCCHHHHhcCcccCCC
Confidence              8899999999999864

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found

>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1

Probab=99.96  E-value=5e-29  Score=211.74  Aligned_cols=172  Identities=30%  Similarity=0.470  Sum_probs=114.4

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCc--cccCCCCCCceEEeecCC----------------
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSS--YFKRMPKSSAIKVIDFGS----------------   62 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~--~~~~~~~~~~~~l~dfg~----------------   62 (252)
                      ||+|||++||+||||||+|||++.++.++++|||++........  .... .........+|..                
T Consensus       113 al~~lH~~~ivHrDlKp~NILl~~~g~~kL~DFGla~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  191 (382)
T cd05625         113 AVESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDSKYYQS-GDHVRQDSMDFSNEWGDPANCRCGDRLKP  191 (382)
T ss_pred             HHHHHHhCCeecCCCCHHHEEECCCCCEEEeECCCCcccccccccccccc-ccccccccccccccccccccccccccccc
Confidence            68999999999999999999999999999999998754321110  0000 0000000000000                


Q ss_pred             -----cccc-CCCCCccccCCCcccchhhhcCCCCccchhHhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHH
Q 025467           63 -----TTYE-RPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHM  136 (252)
Q Consensus        63 -----~~~~-~~~~~~~~~t~~y~aPE~l~~~~~~~~~Diws~G~~l~~l~~g~~pf~~~~~~~~~~~~~~~~g~~p~~~  136 (252)
                           .... .......+||+.|+|||++.+..++.++||||+||++|+|++|..||.+.+.......+......     
T Consensus       192 ~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~-----  266 (382)
T cd05625         192 LERRAARQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEMLVGQPPFLAQTPLETQMKVINWQTS-----  266 (382)
T ss_pred             hhhhhccccccccccccccCcccCCHHHhcCCCCCCeeeEEechHHHHHHHhCCCCCCCCCHHHHHHHHHccCCC-----
Confidence                 0000 00112247899999999999889999999999999999999999999876654333222210000     


Q ss_pred             HHHhhHHHHHHhhcCCCCCCccccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchh
Q 025467          137 LKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAG  216 (252)
Q Consensus       137 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  216 (252)
                                      ...+                                                     .....++
T Consensus       267 ----------------~~~p-----------------------------------------------------~~~~~s~  277 (382)
T cd05625         267 ----------------LHIP-----------------------------------------------------PQAKLSP  277 (382)
T ss_pred             ----------------cCCC-----------------------------------------------------CcccCCH
Confidence                            0000                                                     0123456


Q ss_pred             hHHHHHHHhccCCCCCCCC---HHHHHcCCCCCCc
Q 025467          217 DLTHLLQGLLRYDPTDRLT---AREALRHPFFTRD  248 (252)
Q Consensus       217 ~~~~ll~~~L~~dP~~R~t---a~e~l~hpwf~~~  248 (252)
                      ++.+||.+|+ .+|++|++   ++++++||||+..
T Consensus       278 ~~~~li~~l~-~~p~~R~~~~~~~ei~~hp~f~~~  311 (382)
T cd05625         278 EASDLIIKLC-RGPEDRLGKNGADEIKAHPFFKTI  311 (382)
T ss_pred             HHHHHHHHHc-cCHhHcCCCCCHHHHhcCCCcCCc
Confidence            8899999976 59999998   9999999999874

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an

>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9

Probab=99.96  E-value=1.7e-28  Score=202.42  Aligned_cols=172  Identities=27%  Similarity=0.498  Sum_probs=118.3

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCC-------CCcc
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD-------QNYI   73 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~-------~~~~   73 (252)
                      ||+|||++|++|+||||+||+++..+.                           ++|+|||.+......       ....
T Consensus       131 al~~lH~~~i~H~dl~p~nil~~~~~~---------------------------~kl~dfg~~~~~~~~~~~~~~~~~~~  183 (310)
T cd07865         131 GLYYIHRNKILHRDMKAANILITKDGI---------------------------LKLADFGLARAFSLSKNSKPNRYTNR  183 (310)
T ss_pred             HHHHHHHCCeeccCCCHHHEEECCCCc---------------------------EEECcCCCcccccCCcccCCCCccCc
Confidence            689999999999999999999965554                           455555544322111       1123


Q ss_pred             ccCCCcccchhhhcC-CCCccchhHhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHHHHHHhhcCC
Q 025467           74 VSTRHYRAPEVILGL-GWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGR  152 (252)
Q Consensus        74 ~~t~~y~aPE~l~~~-~~~~~~Diws~G~~l~~l~~g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~  152 (252)
                      .++..|+|||.+.+. .++.++|+||+||++|++++|..||.+.+.......+....|.+|............ +.   .
T Consensus       184 ~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~el~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~---~  259 (310)
T cd07865         184 VVTLWYRPPELLLGERDYGPPIDMWGAGCIMAEMWTRSPIMQGNTEQHQLTLISQLCGSITPEVWPGVDKLEL-FK---K  259 (310)
T ss_pred             ccCccccCcHHhcCCcccCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhcccccchhh-hh---h
Confidence            567789999998765 368899999999999999999999998888788888888888877655433321100 00   0


Q ss_pred             CCCCccccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCC
Q 025467          153 LDWPEGAASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTD  232 (252)
Q Consensus       153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~  232 (252)
                      ...+....  ....                                        ........+..+.+||.+||..||.+
T Consensus       260 ~~~~~~~~--~~~~----------------------------------------~~l~~~~~~~~~~dli~~~l~~~P~~  297 (310)
T cd07865         260 MELPQGQK--RKVK----------------------------------------ERLKPYVKDPHALDLIDKLLVLDPAK  297 (310)
T ss_pred             ccCCCccc--hhhH----------------------------------------HhcccccCCHHHHHHHHHHhcCChhh
Confidence            00000000  0000                                        00001123457889999999999999


Q ss_pred             CCCHHHHHcCCCC
Q 025467          233 RLTAREALRHPFF  245 (252)
Q Consensus       233 R~ta~e~l~hpwf  245 (252)
                      |||++++|+||||
T Consensus       298 R~t~~e~l~h~~f  310 (310)
T cd07865         298 RIDADTALNHDFF  310 (310)
T ss_pred             ccCHHHHhcCCCC
Confidence            9999999999998

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl

>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3

Probab=99.96  E-value=2.2e-29  Score=209.53  Aligned_cols=143  Identities=29%  Similarity=0.393  Sum_probs=109.2

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCC---CCCccccCC
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERP---DQNYIVSTR   77 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~---~~~~~~~t~   77 (252)
                      ||+|||++||+||||||+|||++.                           .+.++|+|||++.....   ......||.
T Consensus       108 al~~lH~~givH~Dlkp~NIll~~---------------------------~~~~kL~DfG~~~~~~~~~~~~~~~~gt~  160 (325)
T cd05604         108 ALGYLHSINIVYRDLKPENILLDS---------------------------QGHVVLTDFGLCKEGIAQSDTTTTFCGTP  160 (325)
T ss_pred             HHHHHHHCCeeecCCCHHHeEECC---------------------------CCCEEEeecCCcccCCCCCCCcccccCCh
Confidence            689999999999999999999944                           44577777777653211   122346899


Q ss_pred             CcccchhhhcCCCCccchhHhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHHHHHHhhcCCCCCCc
Q 025467           78 HYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPE  157 (252)
Q Consensus        78 ~y~aPE~l~~~~~~~~~Diws~G~~l~~l~~g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~  157 (252)
                      .|+|||++.+..++.++||||+||++|+|++|..||.+.+.......+..                       .....  
T Consensus       161 ~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~~~~~~~~~~-----------------------~~~~~--  215 (325)
T cd05604         161 EYLAPEVIRKQPYDNTVDWWCLGAVLYEMLYGLPPFYCRDVAEMYDNILH-----------------------KPLVL--  215 (325)
T ss_pred             hhCCHHHHcCCCCCCcCccccccceehhhhcCCCCCCCCCHHHHHHHHHc-----------------------CCccC--
Confidence            99999999988899999999999999999999999987654433222211                       00000  


Q ss_pred             cccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCCCCCH-
Q 025467          158 GAASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTA-  236 (252)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~ta-  236 (252)
                                                                           ....+..+.++|++||+.||.+||++ 
T Consensus       216 -----------------------------------------------------~~~~~~~~~~ll~~ll~~~p~~R~~~~  242 (325)
T cd05604         216 -----------------------------------------------------RPGASLTAWSILEELLEKDRQRRLGAK  242 (325)
T ss_pred             -----------------------------------------------------CCCCCHHHHHHHHHHhccCHHhcCCCC
Confidence                                                                 01234578899999999999999986 


Q ss_pred             ---HHHHcCCCCCCc
Q 025467          237 ---REALRHPFFTRD  248 (252)
Q Consensus       237 ---~e~l~hpwf~~~  248 (252)
                         .++++||||+..
T Consensus       243 ~~~~~i~~h~~f~~~  257 (325)
T cd05604         243 EDFLEIQEHPFFESL  257 (325)
T ss_pred             CCHHHHhcCCCcCCC
Confidence               599999999874

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,

>KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.96  E-value=1.7e-29  Score=195.55  Aligned_cols=98  Identities=30%  Similarity=0.569  Sum_probs=81.5

Q ss_pred             Chhhhhc--cC--ccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCCC---cc
Q 025467            1 MFAVMHD--LC--MIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQN---YI   73 (252)
Q Consensus         1 aL~~lH~--~~--ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~~---~~   73 (252)
                      ||.++|+  .+  |+||||||.||+++                           .++.+||+|||+++......+   ..
T Consensus       136 AL~~cH~~~~r~~VmHRDIKPaNIFl~---------------------------~~gvvKLGDfGL~r~l~s~~tfA~S~  188 (375)
T KOG0591|consen  136 ALYHCHSKIPRGTVMHRDIKPANIFLT---------------------------ANGVVKLGDFGLGRFLSSKTTFAHSL  188 (375)
T ss_pred             HHHHHhccccccceeeccCcchheEEc---------------------------CCCceeeccchhHhHhcchhHHHHhh
Confidence            6889998  44  99999999999995                           455678888888876655443   36


Q ss_pred             ccCCCcccchhhhcCCCCccchhHhHHHHHHHHHhCCCCCCCCChHHHHHHH
Q 025467           74 VSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMM  125 (252)
Q Consensus        74 ~~t~~y~aPE~l~~~~~~~~~Diws~G~~l~~l~~g~~pf~~~~~~~~~~~~  125 (252)
                      +|||+||+||.+...+|+.++||||+||++|+|+.-.+||.+.+-.....+|
T Consensus       189 VGTPyYMSPE~i~~~~Y~~kSDiWslGCllyEMcaL~~PF~g~n~~~L~~KI  240 (375)
T KOG0591|consen  189 VGTPYYMSPERIHESGYNFKSDIWSLGCLLYEMCALQSPFYGDNLLSLCKKI  240 (375)
T ss_pred             cCCCcccCHHHHhcCCCCcchhHHHHHHHHHHHHhcCCCcccccHHHHHHHH
Confidence            9999999999999999999999999999999999999999987544333333

>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha

Probab=99.96  E-value=9.8e-29  Score=205.41  Aligned_cols=144  Identities=28%  Similarity=0.448  Sum_probs=110.1

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCC---CCccccCC
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD---QNYIVSTR   77 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~---~~~~~~t~   77 (252)
                      ||+|||++||+||||||+|||++.                           ++.++|+|||++......   .....||+
T Consensus       113 al~~lH~~~ivHrDikp~Nill~~---------------------------~~~ikL~Dfg~~~~~~~~~~~~~~~~gt~  165 (323)
T cd05615         113 GLFFLHRRGIIYRDLKLDNVMLDS---------------------------EGHIKIADFGMCKEHMVDGVTTRTFCGTP  165 (323)
T ss_pred             HHHHHHHCCeeccCCCHHHeEECC---------------------------CCCEEEeccccccccCCCCccccCccCCc
Confidence            689999999999999999999954                           445677777766532211   12346899


Q ss_pred             CcccchhhhcCCCCccchhHhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHHHHHHhhcCCCCCCc
Q 025467           78 HYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPE  157 (252)
Q Consensus        78 ~y~aPE~l~~~~~~~~~Diws~G~~l~~l~~g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~  157 (252)
                      .|+|||++.+..++.++|+||+||++|+|++|..||.+.+.......+....                       ...+ 
T Consensus       166 ~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~~~~~~~i~~~~-----------------------~~~p-  221 (323)
T cd05615         166 DYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDEDELFQSIMEHN-----------------------VSYP-  221 (323)
T ss_pred             cccCHHHHcCCCCCCccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHhCC-----------------------CCCC-
Confidence            9999999998889999999999999999999999998766544333322211                       1111 


Q ss_pred             cccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCCCCC--
Q 025467          158 GAASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLT--  235 (252)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~t--  235 (252)
                                                                            ...+.++.+|+.+||+.||.+|++  
T Consensus       222 ------------------------------------------------------~~~~~~~~~li~~~l~~~p~~R~~~~  247 (323)
T cd05615         222 ------------------------------------------------------KSLSKEAVSICKGLMTKHPSKRLGCG  247 (323)
T ss_pred             ------------------------------------------------------ccCCHHHHHHHHHHcccCHhhCCCCC
Confidence                                                                  123457899999999999999997  


Q ss_pred             ---HHHHHcCCCCCCcc
Q 025467          236 ---AREALRHPFFTRDH  249 (252)
Q Consensus       236 ---a~e~l~hpwf~~~~  249 (252)
                         .+++++||||....
T Consensus       248 ~~~~~~i~~h~~f~~~~  264 (323)
T cd05615         248 PEGERDIREHAFFRRID  264 (323)
T ss_pred             CCCHHHHhcCcccCCCC
Confidence               58999999998753

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a

>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase

Probab=99.96  E-value=2.2e-28  Score=204.88  Aligned_cols=174  Identities=33%  Similarity=0.580  Sum_probs=127.4

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCCCccccCCCcc
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYR   80 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~~~~~~t~~y~   80 (252)
                      ||+|||++||+||||||+||+++.                           .+.++++|||.+...........++..|+
T Consensus       130 al~~LH~~gi~H~dlkp~Nill~~---------------------------~~~~kl~dfg~~~~~~~~~~~~~~~~~y~  182 (343)
T cd07880         130 GLKYIHAAGIIHRDLKPGNLAVNE---------------------------DCELKILDFGLARQTDSEMTGYVVTRWYR  182 (343)
T ss_pred             HHHHHHhCCeecCCCCHHHEEEcC---------------------------CCCEEEeecccccccccCccccccCCccc
Confidence            689999999999999999999944                           44577788887765444333446788899


Q ss_pred             cchhhhcC-CCCccchhHhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHHHHHHhhcCCCCCCccc
Q 025467           81 APEVILGL-GWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGA  159 (252)
Q Consensus        81 aPE~l~~~-~~~~~~Diws~G~~l~~l~~g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~  159 (252)
                      |||.+.+. .++.++|+||+||+++++++|..||.+.+.......+....+..+..+...+...........        
T Consensus       183 aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------  254 (343)
T cd07880         183 APEVILNWMHYTQTVDIWSVGCIMAEMLTGKPLFKGHDHLDQLMEIMKVTGTPSKEFVQKLQSEDAKNYVKK--------  254 (343)
T ss_pred             CHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHhhcchhHHHHHHh--------
Confidence            99998763 578899999999999999999999998877777777777777777766554432111000000        


Q ss_pred             cchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCCCCCHHHH
Q 025467          160 ASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREA  239 (252)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~ta~e~  239 (252)
                                 .+..                            .+..........+.++.++|.+||+.||.+|||+.++
T Consensus       255 -----------~~~~----------------------------~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~t~~~~  295 (343)
T cd07880         255 -----------LPRF----------------------------RKKDFRSLLPNANPLAVNVLEKMLVLDAESRITAAEA  295 (343)
T ss_pred             -----------cccc----------------------------CcchHHHhccCCChHHHHHHHHHcCCChhhCCCHHHH
Confidence                       0000                            0000111123456789999999999999999999999


Q ss_pred             HcCCCCCCc
Q 025467          240 LRHPFFTRD  248 (252)
Q Consensus       240 l~hpwf~~~  248 (252)
                      ++||||+..
T Consensus       296 l~~~~~~~~  304 (343)
T cd07880         296 LAHPYFEEF  304 (343)
T ss_pred             hcCccHhhh
Confidence            999999864

Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12

>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase

Probab=99.96  E-value=2.7e-28  Score=198.63  Aligned_cols=168  Identities=34%  Similarity=0.601  Sum_probs=122.3

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCC--CccccCCC
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ--NYIVSTRH   78 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~--~~~~~t~~   78 (252)
                      ||+|||+.||+||||+|+||+++.                            +.++|+|||.+.......  ....++..
T Consensus       112 ~L~~LH~~~i~H~dl~p~ni~l~~----------------------------~~~kl~dfg~~~~~~~~~~~~~~~~~~~  163 (282)
T cd07831         112 SLDHMHRNGIFHRDIKPENILIKD----------------------------DILKLADFGSCRGIYSKPPYTEYISTRW  163 (282)
T ss_pred             HHHHHHHCCceecccCHHHEEEcC----------------------------CCeEEEecccccccccCCCcCCCCCCcc
Confidence            689999999999999999999943                            457788888776433221  22357888


Q ss_pred             cccchhhhcC-CCCccchhHhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHHHHHHhhcCCCCCCc
Q 025467           79 YRAPEVILGL-GWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPE  157 (252)
Q Consensus        79 y~aPE~l~~~-~~~~~~Diws~G~~l~~l~~g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~  157 (252)
                      |+|||.+... .++.++|+||+||++|+|++|..||.+.+..+.+..+....+..++.+.......     ......++.
T Consensus       164 y~aPE~~~~~~~~~~~~Di~slGv~l~el~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~  238 (282)
T cd07831         164 YRAPECLLTDGYYGPKMDIWAVGCVFFEILSLFPLFPGTNELDQIAKIHDVLGTPDAEVLKKFRKS-----RHMNYNFPS  238 (282)
T ss_pred             cCChhHhhcCCCCCcchhHHHHHHHHHHHHcCCcCCCCCCHHHHHHHHHHHcCCCCHHHHHhhccc-----ccccccCcc
Confidence            9999987654 4688999999999999999999999988888888888888888877663221100     000111111


Q ss_pred             cccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCCCCCHH
Q 025467          158 GAASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAR  237 (252)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~ta~  237 (252)
                      ...                                            ..........+..+.+|+.+||+.||++|||++
T Consensus       239 ~~~--------------------------------------------~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~  274 (282)
T cd07831         239 KKG--------------------------------------------TGLRKLLPNASAEGLDLLKKLLAYDPDERITAK  274 (282)
T ss_pred             ccc--------------------------------------------ccHHHHcccccHHHHHHHHHHhccCcccccCHH
Confidence            000                                            000011123467999999999999999999999


Q ss_pred             HHHcCCCC
Q 025467          238 EALRHPFF  245 (252)
Q Consensus       238 e~l~hpwf  245 (252)
                      ++++||||
T Consensus       275 ~~l~~~~~  282 (282)
T cd07831         275 QALRHPYF  282 (282)
T ss_pred             HHhhCCCC
Confidence            99999998

Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.

>KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.96  E-value=5.3e-29  Score=188.55  Aligned_cols=143  Identities=29%  Similarity=0.506  Sum_probs=118.0

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCC-CccccCCCc
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ-NYIVSTRHY   79 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~-~~~~~t~~y   79 (252)
                      ||.|+|..+|+||||||+|+|++.                           .+.+|++|||.+....... ...+||.-|
T Consensus       136 Al~y~h~k~VIhRdiKpenlLlg~---------------------------~~~lkiAdfGwsV~~p~~kR~tlcgt~dy  188 (281)
T KOG0580|consen  136 ALLYCHLKRVIHRDIKPENLLLGS---------------------------AGELKIADFGWSVHAPSNKRKTLCGTLDY  188 (281)
T ss_pred             HHHHhccCCcccCCCCHHHhccCC---------------------------CCCeeccCCCceeecCCCCceeeeccccc
Confidence            789999999999999999999954                           4456777777765543332 346899999


Q ss_pred             ccchhhhcCCCCccchhHhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHHHHHHhhcCCCCCCccc
Q 025467           80 RAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGA  159 (252)
Q Consensus        80 ~aPE~l~~~~~~~~~Diws~G~~l~~l~~g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~  159 (252)
                      .+||...+..++...|+|++|++.|+++.|.+||.+....+...+|.++.-..|                          
T Consensus       189 l~pEmv~~~~hd~~Vd~w~lgvl~yeflvg~ppFes~~~~etYkrI~k~~~~~p--------------------------  242 (281)
T KOG0580|consen  189 LPPEMVEGRGHDKFVDLWSLGVLCYEFLVGLPPFESQSHSETYKRIRKVDLKFP--------------------------  242 (281)
T ss_pred             CCHhhcCCCCccchhhHHHHHHHHHHHHhcCCchhhhhhHHHHHHHHHccccCC--------------------------
Confidence            999999999999999999999999999999999988776666665554332222                          


Q ss_pred             cchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCCCCCHHHH
Q 025467          160 ASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREA  239 (252)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~ta~e~  239 (252)
                                                                          ..++.++.|||.+||..+|.+|.+..|+
T Consensus       243 ----------------------------------------------------~~is~~a~dlI~~ll~~~p~~r~~l~~v  270 (281)
T KOG0580|consen  243 ----------------------------------------------------STISGGAADLISRLLVKNPIERLALTEV  270 (281)
T ss_pred             ----------------------------------------------------cccChhHHHHHHHHhccCccccccHHHH
Confidence                                                                3456799999999999999999999999


Q ss_pred             HcCCCCCCc
Q 025467          240 LRHPFFTRD  248 (252)
Q Consensus       240 l~hpwf~~~  248 (252)
                      +.|||+...
T Consensus       271 ~~hpwI~a~  279 (281)
T KOG0580|consen  271 MDHPWIVAN  279 (281)
T ss_pred             hhhHHHHhc
Confidence            999998754

>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2

Probab=99.96  E-value=9e-29  Score=210.07  Aligned_cols=120  Identities=30%  Similarity=0.503  Sum_probs=81.0

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCc--cccC------CCCCC-----ceEEeecCC-----
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSS--YFKR------MPKSS-----AIKVIDFGS-----   62 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~--~~~~------~~~~~-----~~~l~dfg~-----   62 (252)
                      ||+|||+.||+||||||+|||++.++.+++.|||++........  ....      .....     ....+.++.     
T Consensus       113 aL~~LH~~givHrDlKp~Nili~~~~~~kL~DFGl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  192 (381)
T cd05626         113 AIESVHKMGFIHRDIKPDNILIDLDGHIKLTDFGLCTGFRWTHNSKYYQKGSHIRQDSMEPSDLWDDVSNCRCGDRLKTL  192 (381)
T ss_pred             HHHHHHhCCeeecCCcHHHEEECCCCCEEEeeCcCCcccccccccccccccccccccccCcccccccccccccccccchh
Confidence            68999999999999999999999889999999998754321110  0000      00000     000000000     


Q ss_pred             --cccc---CCCCCccccCCCcccchhhhcCCCCccchhHhHHHHHHHHHhCCCCCCCCChHH
Q 025467           63 --TTYE---RPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLE  120 (252)
Q Consensus        63 --~~~~---~~~~~~~~~t~~y~aPE~l~~~~~~~~~Diws~G~~l~~l~~g~~pf~~~~~~~  120 (252)
                        ....   .......+||+.|+|||++.+..++.++||||+||++|+|++|..||...+...
T Consensus       193 ~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~  255 (381)
T cd05626         193 EQRATKQHQRCLAHSLVGTPNYIAPEVLLRKGYTQLCDWWSVGVILFEMLVGQPPFLAPTPTE  255 (381)
T ss_pred             hccccccccccccccccCCccccCHHHHcCCCCCCccceeehhhHHHHHHhCCCCCcCCCHHH
Confidence              0000   000123478999999999998889999999999999999999999998765433

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po

>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=99.96  E-value=5.6e-29  Score=210.12  Aligned_cols=173  Identities=28%  Similarity=0.436  Sum_probs=114.1

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCcc--ccCCCCCCceEEeecCCcccc------------
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSY--FKRMPKSSAIKVIDFGSTTYE------------   66 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~--~~~~~~~~~~~l~dfg~~~~~------------   66 (252)
                      ||+|||++||+||||||+|||++.++.++++|||++.........  .............++......            
T Consensus       113 aL~~lH~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  192 (364)
T cd05599         113 AIDSIHKLGYIHRDIKPDNLLLDAKGHIKLSDFGLCTGLKKSHRTEFYRILSHALPSNFLDFISKPMSSKRKAETWKRNR  192 (364)
T ss_pred             HHHHHHHCCeEeccCCHHHeEECCCCCEEEeecccceeccccccccccccccccccccccccccccccccccccchhhcc
Confidence            689999999999999999999988888888888877543221110  000000000000000000000            


Q ss_pred             CCCCCccccCCCcccchhhhcCCCCccchhHhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHHHHH
Q 025467           67 RPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEK  146 (252)
Q Consensus        67 ~~~~~~~~~t~~y~aPE~l~~~~~~~~~Diws~G~~l~~l~~g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~  146 (252)
                      .......+||+.|+|||++....++.++||||+||++|+|++|..||.+.+.......+.....                
T Consensus       193 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~el~~G~~Pf~~~~~~~~~~~i~~~~~----------------  256 (364)
T cd05599         193 RALAYSTVGTPDYIAPEVFLQTGYNKECDWWSLGVIMYEMLVGYPPFCSDNPQETYRKIINWKE----------------  256 (364)
T ss_pred             cccccccccCccccCHHHHcCCCCCCeeeeecchhHHHHhhcCCCCCCCCCHHHHHHHHHcCCC----------------
Confidence            0001123689999999999888899999999999999999999999987654433222211000                


Q ss_pred             HhhcCCCCCCccccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhc
Q 025467          147 YVRRGRLDWPEGAASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLL  226 (252)
Q Consensus       147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L  226 (252)
                           .+..+.                                                     ....++++.+||.+||
T Consensus       257 -----~~~~~~-----------------------------------------------------~~~~s~~~~~li~~ll  278 (364)
T cd05599         257 -----TLQFPD-----------------------------------------------------EVPLSPEAKDLIKRLC  278 (364)
T ss_pred             -----ccCCCC-----------------------------------------------------CCCCCHHHHHHHHHHc
Confidence                 000000                                                     0124568899999999


Q ss_pred             cCCCCCCCC---HHHHHcCCCCCCc
Q 025467          227 RYDPTDRLT---AREALRHPFFTRD  248 (252)
Q Consensus       227 ~~dP~~R~t---a~e~l~hpwf~~~  248 (252)
                      . +|.+|++   +++++.||||+..
T Consensus       279 ~-~p~~R~~~~~~~~ll~h~~~~~~  302 (364)
T cd05599         279 C-EAERRLGNNGVNEIKSHPFFKGV  302 (364)
T ss_pred             c-CHhhcCCCCCHHHHhcCCCcCCC
Confidence            7 9999998   9999999999865

Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica

>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=99.96  E-value=5.6e-29  Score=211.08  Aligned_cols=171  Identities=26%  Similarity=0.451  Sum_probs=113.5

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCc--cccCC----------CCCCce-------------
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSS--YFKRM----------PKSSAI-------------   55 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~--~~~~~----------~~~~~~-------------   55 (252)
                      ||+|||+.||+||||||+|||++.++.+++.|||++........  .....          ......             
T Consensus       113 aL~~LH~~givHrDlkp~NIll~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  192 (377)
T cd05629         113 AIEAVHKLGFIHRDIKPDNILIDRGGHIKLSDFGLSTGFHKQHDSAYYQKLLQGKSNKNRIDNRNSVAVDSINLTMSSKD  192 (377)
T ss_pred             HHHHHHhCCeeccCCCHHHEEECCCCCEEEeecccccccccccccccccccccccccccccccccccccccccccccchh
Confidence            68999999999999999999999889999999998753211000  00000          000000             


Q ss_pred             EEeecCCccccCCCCCccccCCCcccchhhhcCCCCccchhHhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchH
Q 025467           56 KVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQH  135 (252)
Q Consensus        56 ~l~dfg~~~~~~~~~~~~~~t~~y~aPE~l~~~~~~~~~Diws~G~~l~~l~~g~~pf~~~~~~~~~~~~~~~~g~~p~~  135 (252)
                      .+.+++.+...  .....+||+.|+|||++.+..++.++||||+||++|+|++|..||.+.+..+.+..+.....     
T Consensus       193 ~~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~-----  265 (377)
T cd05629         193 QIATWKKNRRL--MAYSTVGTPDYIAPEIFLQQGYGQECDWWSLGAIMFECLIGWPPFCSENSHETYRKIINWRE-----  265 (377)
T ss_pred             hhhhhhhcccc--cccccCCCccccCHHHHccCCCCCceeeEecchhhhhhhcCCCCCCCCCHHHHHHHHHccCC-----
Confidence            00111110000  01124689999999999988899999999999999999999999987665444333221100     


Q ss_pred             HHHHhhHHHHHHhhcCCCCCCccccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccch
Q 025467          136 MLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSA  215 (252)
Q Consensus       136 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  215 (252)
                                      .+.++.                                                     ....+
T Consensus       266 ----------------~~~~p~-----------------------------------------------------~~~~s  276 (377)
T cd05629         266 ----------------TLYFPD-----------------------------------------------------DIHLS  276 (377)
T ss_pred             ----------------ccCCCC-----------------------------------------------------CCCCC
Confidence                            011110                                                     01235


Q ss_pred             hhHHHHHHHhccCCCCCC---CCHHHHHcCCCCCCc
Q 025467          216 GDLTHLLQGLLRYDPTDR---LTAREALRHPFFTRD  248 (252)
Q Consensus       216 ~~~~~ll~~~L~~dP~~R---~ta~e~l~hpwf~~~  248 (252)
                      .++.+||.+||. +|.+|   +|+.+++.||||++.
T Consensus       277 ~~~~dli~~lL~-~~~~r~~r~~~~~~l~hp~~~~~  311 (377)
T cd05629         277 VEAEDLIRRLIT-NAENRLGRGGAHEIKSHPFFRGV  311 (377)
T ss_pred             HHHHHHHHHHhc-CHhhcCCCCCHHHHhcCCCcCCC
Confidence            689999999998 77775   599999999999864

Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of

>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]

Probab=99.96  E-value=1.5e-28  Score=204.19  Aligned_cols=94  Identities=30%  Similarity=0.449  Sum_probs=79.5

Q ss_pred             ChhhhhccC-ccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCC-ceEEeecCCccccCC---CCCcccc
Q 025467            1 MFAVMHDLC-MIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSS-AIKVIDFGSTTYERP---DQNYIVS   75 (252)
Q Consensus         1 aL~~lH~~~-ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~-~~~l~dfg~~~~~~~---~~~~~~~   75 (252)
                      ||.|||+++ |||||||++|||++                           ... ++||+|||+++....   ..+...|
T Consensus       154 Gm~YLH~~~~iIHrDLK~~NiLv~---------------------------~~~~~~KI~DFGlsr~~~~~~~~~~~~~G  206 (362)
T KOG0192|consen  154 GMEYLHSEGPIIHRDLKSDNILVD---------------------------LKGKTLKIADFGLSREKVISKTSMTSVAG  206 (362)
T ss_pred             HHHHHhcCCCeeecccChhhEEEc---------------------------CCCCEEEECCCccceeeccccccccCCCC
Confidence            689999999 99999999999994                           443 788888888865543   2333589


Q ss_pred             CCCcccchhhh--cCCCCccchhHhHHHHHHHHHhCCCCCCCCChHHH
Q 025467           76 TRHYRAPEVIL--GLGWTYPCDIWSVGCILVELCTGEALFQTHENLEH  121 (252)
Q Consensus        76 t~~y~aPE~l~--~~~~~~~~Diws~G~~l~~l~~g~~pf~~~~~~~~  121 (252)
                      |..|||||++.  ...|+.++||||||+++|++++|..||.+......
T Consensus       207 T~~wMAPEv~~~~~~~~~~K~DvySFgIvlWEl~t~~~Pf~~~~~~~~  254 (362)
T KOG0192|consen  207 TYRWMAPEVLRGEKSPYTEKSDVYSFGIVLWELLTGEIPFEDLAPVQV  254 (362)
T ss_pred             CccccChhhhcCCCCcCCccchhhhHHHHHHHHHHCCCCCCCCCHHHH
Confidence            99999999999  56899999999999999999999999998776333

>KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription]

Probab=99.96  E-value=1.2e-28  Score=185.89  Aligned_cols=181  Identities=27%  Similarity=0.570  Sum_probs=127.2

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCCCc--cccCCC
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNY--IVSTRH   78 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~~~--~~~t~~   78 (252)
                      ||.|||++||+|||+||.|++++..                          ...++|+|+|+|....+....  .+.+..
T Consensus       144 ALdyCHS~GImHRDVKPhNvmIdh~--------------------------~rkLrlIDWGLAEFYHp~~eYnVRVASRy  197 (338)
T KOG0668|consen  144 ALDYCHSMGIMHRDVKPHNVMIDHE--------------------------LRKLRLIDWGLAEFYHPGKEYNVRVASRY  197 (338)
T ss_pred             HHhHHHhcCcccccCCcceeeechh--------------------------hceeeeeecchHhhcCCCceeeeeeehhh
Confidence            7999999999999999999999643                          346899999999766555433  356778


Q ss_pred             cccchhhhcC-CCCccchhHhHHHHHHHHHhCCCC-CCCCChHHHHHHHHHHhCCCchHHHHHhhHHHHHHhhcCCCCCC
Q 025467           79 YRAPEVILGL-GWTYPCDIWSVGCILVELCTGEAL-FQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWP  156 (252)
Q Consensus        79 y~aPE~l~~~-~~~~~~Diws~G~~l~~l~~g~~p-f~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~  156 (252)
                      |-.||++... .|..+.|+||+||+++.|+..+.| |.|.++.+++-+|.+++|+-  ++...+.+..        +..+
T Consensus       198 fKGPELLVdy~~YDYSLD~WS~GcmlA~miFrkepFFhG~dN~DQLVkIakVLGt~--el~~Yl~KY~--------i~Ld  267 (338)
T KOG0668|consen  198 FKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVKIAKVLGTD--ELYAYLNKYQ--------IDLD  267 (338)
T ss_pred             cCCchheeechhccccHHHHHHHHHHHHHHhccCcccCCCCCHHHHHHHHHHhChH--HHHHHHHHHc--------cCCC
Confidence            8999998865 478899999999999999998866 57888999999999999972  3322222211        1111


Q ss_pred             ccccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCCCCCH
Q 025467          157 EGAASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTA  236 (252)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~ta  236 (252)
                      ..      ...++.         ......|.                ...-.....-.++++.|||.++|.+|-.+|+||
T Consensus       268 p~------~~~i~~---------~~~rk~w~----------------~Fi~~~n~hl~~peaiDlldklLrYDHqeRlTa  316 (338)
T KOG0668|consen  268 PQ------FEDILG---------RHSRKPWS----------------RFINSENQHLVSPEAIDLLDKLLRYDHQERLTA  316 (338)
T ss_pred             hh------HhhHhh---------ccccccHH----------------HhCCccccccCChHHHHHHHHHHhhccccccch
Confidence            00      000000         00000000                000011112346899999999999999999999


Q ss_pred             HHHHcCCCCCCc
Q 025467          237 REALRHPFFTRD  248 (252)
Q Consensus       237 ~e~l~hpwf~~~  248 (252)
                      .|+++||||...
T Consensus       317 kEam~HpyF~~~  328 (338)
T KOG0668|consen  317 KEAMAHPYFAPV  328 (338)
T ss_pred             HHHhcCchHHHH
Confidence            999999999743

>KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.96  E-value=5.7e-29  Score=211.13  Aligned_cols=149  Identities=26%  Similarity=0.461  Sum_probs=111.6

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCC---CCCccccCC
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERP---DQNYIVSTR   77 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~---~~~~~~~t~   77 (252)
                      ||.|||+++|||||||+.|||++.+|..+                           |+|||.+.....   .....+||+
T Consensus       142 ALn~LHs~~iIHRDLKAGNiL~TldGdir---------------------------LADFGVSAKn~~t~qkRDsFIGTP  194 (1187)
T KOG0579|consen  142 ALNWLHSQNIIHRDLKAGNILLTLDGDIR---------------------------LADFGVSAKNKSTRQKRDSFIGTP  194 (1187)
T ss_pred             HHHHHhhcchhhhhccccceEEEecCcEe---------------------------eecccccccchhHHhhhccccCCc
Confidence            79999999999999999999998877654                           555554332111   122358999


Q ss_pred             Ccccchhhhc-----CCCCccchhHhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHHHHHHhhcCC
Q 025467           78 HYRAPEVILG-----LGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGR  152 (252)
Q Consensus        78 ~y~aPE~l~~-----~~~~~~~Diws~G~~l~~l~~g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~  152 (252)
                      +|||||+..+     .+|+.++||||||++|.+|.-+.+|-+..+...++..+...-  +|                   
T Consensus       195 YWMAPEVvmCET~KD~PYDykaDiWSlGITLIEMAqiEPPHhelnpMRVllKiaKSe--PP-------------------  253 (1187)
T KOG0579|consen  195 YWMAPEVVMCETFKDQPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSE--PP-------------------  253 (1187)
T ss_pred             ccccchheeeccccCCCchhhhhHHhhhhHHHHHhccCCCccccchHHHHHHHhhcC--CC-------------------
Confidence            9999999864     468999999999999999999999977666555554443311  11                   


Q ss_pred             CCCCccccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCC
Q 025467          153 LDWPEGAASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTD  232 (252)
Q Consensus       153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~  232 (252)
                           .....                                                 -..+..|.|||++||..||..
T Consensus       254 -----TLlqP-------------------------------------------------S~Ws~~F~DfLk~cL~Knp~~  279 (1187)
T KOG0579|consen  254 -----TLLQP-------------------------------------------------SHWSRSFSDFLKRCLVKNPRN  279 (1187)
T ss_pred             -----cccCc-------------------------------------------------chhhhHHHHHHHHHHhcCCcc
Confidence                 00000                                                 112458999999999999999


Q ss_pred             CCCHHHHHcCCCCCCcccc
Q 025467          233 RLTAREALRHPFFTRDHLR  251 (252)
Q Consensus       233 R~ta~e~l~hpwf~~~~~~  251 (252)
                      ||+|.++|+||||...+.+
T Consensus       280 Rp~aaqll~Hpfv~~~~Sn  298 (1187)
T KOG0579|consen  280 RPPAAQLLKHPFVQNAPSN  298 (1187)
T ss_pred             CCCHHHHhhCcccccCCcc
Confidence            9999999999999976643

>KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms]

Probab=99.96  E-value=5.9e-29  Score=191.96  Aligned_cols=145  Identities=30%  Similarity=0.453  Sum_probs=112.4

Q ss_pred             Chhhhhc-cCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCC--CCccccCC
Q 025467            1 MFAVMHD-LCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD--QNYIVSTR   77 (252)
Q Consensus         1 aL~~lH~-~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~--~~~~~~t~   77 (252)
                      ||.||-. ++|+|||+||+|||+                           +..+.+|+||||.+-.....  .+...|.+
T Consensus       203 AL~YLKeKH~viHRDvKPSNILl---------------------------De~GniKlCDFGIsGrlvdSkAhtrsAGC~  255 (391)
T KOG0983|consen  203 ALYYLKEKHGVIHRDVKPSNILL---------------------------DERGNIKLCDFGISGRLVDSKAHTRSAGCA  255 (391)
T ss_pred             HHHHHHHhcceeecccCccceEE---------------------------ccCCCEEeecccccceeecccccccccCCc
Confidence            6788886 799999999999999                           56677899999988654332  33457889


Q ss_pred             CcccchhhhcC---CCCccchhHhHHHHHHHHHhCCCCCCCCCh-HHHHHHHHHHhCCCchHHHHHhhHHHHHHhhcCCC
Q 025467           78 HYRAPEVILGL---GWTYPCDIWSVGCILVELCTGEALFQTHEN-LEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRL  153 (252)
Q Consensus        78 ~y~aPE~l~~~---~~~~~~Diws~G~~l~~l~~g~~pf~~~~~-~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~  153 (252)
                      .|||||.+.-.   .|..++||||||++++++.||+.||.+++. .+.+   ..++...|.-                  
T Consensus       256 ~YMaPERidp~~~~kYDiRaDVWSlGITlveLaTg~yPy~~c~tdFe~l---tkvln~ePP~------------------  314 (391)
T KOG0983|consen  256 AYMAPERIDPPDKPKYDIRADVWSLGITLVELATGQYPYKGCKTDFEVL---TKVLNEEPPL------------------  314 (391)
T ss_pred             cccCccccCCCCCCccchhhhhhhhccchhhhhcccCCCCCCCccHHHH---HHHHhcCCCC------------------
Confidence            99999998643   588999999999999999999999998653 3333   3333322210                  


Q ss_pred             CCCccccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCCC
Q 025467          154 DWPEGAASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDR  233 (252)
Q Consensus       154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R  233 (252)
                       .+                                                     .....+++|.+|+..||+.|+.+|
T Consensus       315 -L~-----------------------------------------------------~~~gFSp~F~~fv~~CL~kd~r~R  340 (391)
T KOG0983|consen  315 -LP-----------------------------------------------------GHMGFSPDFQSFVKDCLTKDHRKR  340 (391)
T ss_pred             -CC-----------------------------------------------------cccCcCHHHHHHHHHHhhcCcccC
Confidence             00                                                     001246799999999999999999


Q ss_pred             CCHHHHHcCCCCCC
Q 025467          234 LTAREALRHPFFTR  247 (252)
Q Consensus       234 ~ta~e~l~hpwf~~  247 (252)
                      |.-.++|+|||+..
T Consensus       341 P~Y~~Ll~h~Fi~~  354 (391)
T KOG0983|consen  341 PKYNKLLEHPFIKR  354 (391)
T ss_pred             cchHHHhcCcceee
Confidence            99999999999875

>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants

Probab=99.95  E-value=2.3e-28  Score=204.34  Aligned_cols=173  Identities=32%  Similarity=0.572  Sum_probs=123.0

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCC---CCccccCC
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD---QNYIVSTR   77 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~---~~~~~~t~   77 (252)
                      ||+|||+++++||||||+||+++.+                           ..++|+|||.+......   .....++.
T Consensus       120 aL~~LH~~~i~H~dlkp~Nil~~~~---------------------------~~~kL~Dfg~~~~~~~~~~~~~~~~~~~  172 (337)
T cd07858         120 GLKYIHSANVLHRDLKPSNLLLNAN---------------------------CDLKICDFGLARTTSEKGDFMTEYVVTR  172 (337)
T ss_pred             HHHHHHhCCEecCCCCHHHEEEcCC---------------------------CCEEECcCccccccCCCccccccccccc
Confidence            6899999999999999999999543                           44667777766543222   12235678


Q ss_pred             Ccccchhhhc-CCCCccchhHhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhH-HHHHHhhcCCCCC
Q 025467           78 HYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDR-HAEKYVRRGRLDW  155 (252)
Q Consensus        78 ~y~aPE~l~~-~~~~~~~Diws~G~~l~~l~~g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~-~~~~~~~~~~~~~  155 (252)
                      .|+|||.+.. ..++.++|+||+||++|++++|+.||.+.+....+..+....|.++.+.+..... ....+.....   
T Consensus       173 ~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---  249 (337)
T cd07858         173 WYRAPELLLNCSEYTTAIDVWSVGCIFAELLGRKPLFPGKDYVHQLKLITELLGSPSEEDLGFIRNEKARRYIRSLP---  249 (337)
T ss_pred             CccChHHHhcCCCCCCcccHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhCCCChHHhhhcCchhhhHHHHhcC---
Confidence            8999999875 4588999999999999999999999998877778888888888776554322111 1111110000   


Q ss_pred             CccccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCCCCC
Q 025467          156 PEGAASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLT  235 (252)
Q Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~t  235 (252)
                                    ..+.                               ..........+..+.+|+++||+.||++|||
T Consensus       250 --------------~~~~-------------------------------~~~~~~~~~~~~~~~~li~~~l~~~P~~Rps  284 (337)
T cd07858         250 --------------YTPR-------------------------------QSFARLFPHANPLAIDLLEKMLVFDPSKRIT  284 (337)
T ss_pred             --------------cccc-------------------------------cCHHHHcccCCHHHHHHHHHHhcCChhhccC
Confidence                          0000                               0000111345678999999999999999999


Q ss_pred             HHHHHcCCCCCCc
Q 025467          236 AREALRHPFFTRD  248 (252)
Q Consensus       236 a~e~l~hpwf~~~  248 (252)
                      ++++++||||...
T Consensus       285 ~~ell~h~~~~~~  297 (337)
T cd07858         285 VEEALAHPYLASL  297 (337)
T ss_pred             HHHHHcCcchhhh
Confidence            9999999999764

Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati

>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1

Probab=99.95  E-value=5.9e-29  Score=206.91  Aligned_cols=143  Identities=32%  Similarity=0.481  Sum_probs=109.1

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCC---CCCccccCC
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERP---DQNYIVSTR   77 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~---~~~~~~~t~   77 (252)
                      ||+|||++||+||||||+|||++.                           .+.++|+|||++.....   ......||+
T Consensus       108 ~L~~lH~~giiHrDlkp~Nili~~---------------------------~~~~kl~DfG~a~~~~~~~~~~~~~~gt~  160 (325)
T cd05602         108 ALGYLHSLNIVYRDLKPENILLDS---------------------------QGHIVLTDFGLCKENIEHNGTTSTFCGTP  160 (325)
T ss_pred             HHHHHHHCCeEecCCCHHHeEECC---------------------------CCCEEEccCCCCcccccCCCCcccccCCc
Confidence            689999999999999999999944                           44567777776653211   122346899


Q ss_pred             CcccchhhhcCCCCccchhHhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHHHHHHhhcCCCCCCc
Q 025467           78 HYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPE  157 (252)
Q Consensus        78 ~y~aPE~l~~~~~~~~~Diws~G~~l~~l~~g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~  157 (252)
                      .|+|||++.+..++.++||||+||++|+|++|..||.+.+....+..+...  +                     ..   
T Consensus       161 ~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~--~---------------------~~---  214 (325)
T cd05602         161 EYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNILNK--P---------------------LQ---  214 (325)
T ss_pred             cccCHHHHcCCCCCCccccccccHHHHHHhcCCCCCCCCCHHHHHHHHHhC--C---------------------cC---
Confidence            999999999888999999999999999999999999876654433322110  0                     00   


Q ss_pred             cccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCCCCCHH
Q 025467          158 GAASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAR  237 (252)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~ta~  237 (252)
                                                                          .....+..+.+++.+||+.||.+|+++.
T Consensus       215 ----------------------------------------------------~~~~~~~~~~~li~~~l~~~p~~R~~~~  242 (325)
T cd05602         215 ----------------------------------------------------LKPNITNSARHLLEGLLQKDRTKRLGAK  242 (325)
T ss_pred             ----------------------------------------------------CCCCCCHHHHHHHHHHcccCHHHCCCCC
Confidence                                                                0123456889999999999999999876


Q ss_pred             ----HHHcCCCCCCc
Q 025467          238 ----EALRHPFFTRD  248 (252)
Q Consensus       238 ----e~l~hpwf~~~  248 (252)
                          ++++|+||...
T Consensus       243 ~~~~~i~~~~~~~~~  257 (325)
T cd05602         243 DDFMEIKNHIFFSPI  257 (325)
T ss_pred             CCHHHHhcCcccCCC
Confidence                89999999753

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt

>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6

Probab=99.95  E-value=5.4e-29  Score=203.47  Aligned_cols=148  Identities=31%  Similarity=0.483  Sum_probs=108.8

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCC--CccccCCC
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ--NYIVSTRH   78 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~--~~~~~t~~   78 (252)
                      ||.|||+.||+||||||+||+++.                           ...++++|||.+.......  ....|+..
T Consensus       114 ~l~~lH~~~iiH~dikp~Nil~~~---------------------------~~~~~l~Dfg~~~~~~~~~~~~~~~g~~~  166 (285)
T cd05630         114 GLEDLHQERIVYRDLKPENILLDD---------------------------HGHIRISDLGLAVHVPEGQTIKGRVGTVG  166 (285)
T ss_pred             HHHHHHhCCEEeCCCCHHHEEECC---------------------------CCCEEEeeccceeecCCCccccCCCCCcc
Confidence            689999999999999999999943                           4457777777765433221  12368899


Q ss_pred             cccchhhhcCCCCccchhHhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHHHHHHhhcCCCCCCcc
Q 025467           79 YRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEG  158 (252)
Q Consensus        79 y~aPE~l~~~~~~~~~Diws~G~~l~~l~~g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~  158 (252)
                      |+|||++.+..++.++|+||+||++|++++|..||...................+                         
T Consensus       167 y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~Pf~~~~~~~~~~~~~~~~~~~~-------------------------  221 (285)
T cd05630         167 YMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEVQ-------------------------  221 (285)
T ss_pred             ccChHHHcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCccchHHHHHhhhhhhh-------------------------
Confidence            9999999888899999999999999999999999976432111111100000000                         


Q ss_pred             ccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCCCCC---
Q 025467          159 AASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLT---  235 (252)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~t---  235 (252)
                                                                       .......+.++.+|+.+||+.||++|+|   
T Consensus       222 -------------------------------------------------~~~~~~~~~~~~~li~~~l~~~p~~R~s~~~  252 (285)
T cd05630         222 -------------------------------------------------EEYSEKFSPDARSLCKMLLCKDPKERLGCQG  252 (285)
T ss_pred             -------------------------------------------------hhcCccCCHHHHHHHHHHhhcCHHHccCCCC
Confidence                                                             0001223467899999999999999999   


Q ss_pred             --HHHHHcCCCCCCcc
Q 025467          236 --AREALRHPFFTRDH  249 (252)
Q Consensus       236 --a~e~l~hpwf~~~~  249 (252)
                        ++|+++||||++..
T Consensus       253 ~~~~~~~~h~~~~~~~  268 (285)
T cd05630         253 GGAREVKEHPLFKQIN  268 (285)
T ss_pred             CchHHHHcChhhhccC
Confidence              99999999998754

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as

>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase

Probab=99.95  E-value=2.6e-29  Score=208.45  Aligned_cols=143  Identities=34%  Similarity=0.558  Sum_probs=110.0

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCC---CCccccCC
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD---QNYIVSTR   77 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~---~~~~~~t~   77 (252)
                      ||+|||++||+||||||+||+++.                           ++.++|+|||.+......   .....|+.
T Consensus       110 ~l~~lH~~~i~H~dlkp~Nil~~~---------------------------~~~~kL~Dfg~~~~~~~~~~~~~~~~g~~  162 (318)
T cd05582         110 ALDHLHSLGIIYRDLKPENILLDE---------------------------EGHIKLTDFGLSKESIDHEKKAYSFCGTV  162 (318)
T ss_pred             HHHHHHHCCEecCCCCHHHeEECC---------------------------CCcEEEeeccCCcccCCCCCceecccCCh
Confidence            689999999999999999999944                           445677777776543222   12246889


Q ss_pred             CcccchhhhcCCCCccchhHhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHHHHHHhhcCCCCCCc
Q 025467           78 HYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPE  157 (252)
Q Consensus        78 ~y~aPE~l~~~~~~~~~Diws~G~~l~~l~~g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~  157 (252)
                      .|+|||.+.+..++.++||||+||++|+|++|..||.+.+.......+....                       ...+ 
T Consensus       163 ~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~i~~~~-----------------------~~~p-  218 (318)
T cd05582         163 EYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGSLPFQGKDRKETMTMILKAK-----------------------LGMP-  218 (318)
T ss_pred             hhcCHHHHcCCCCCCccceeccceEeeeeccCCCCCCCCCHHHHHHHHHcCC-----------------------CCCC-
Confidence            9999999988888999999999999999999999998765544333221110                       1000 


Q ss_pred             cccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCCCCC--
Q 025467          158 GAASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLT--  235 (252)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~t--  235 (252)
                                                                            ...+..+.+||.+||+.||++|||  
T Consensus       219 ------------------------------------------------------~~~~~~~~~li~~~l~~~P~~R~~a~  244 (318)
T cd05582         219 ------------------------------------------------------QFLSPEAQSLLRALFKRNPANRLGAG  244 (318)
T ss_pred             ------------------------------------------------------CCCCHHHHHHHHHHhhcCHhHcCCCC
Confidence                                                                  123468899999999999999999  


Q ss_pred             ---HHHHHcCCCCCCc
Q 025467          236 ---AREALRHPFFTRD  248 (252)
Q Consensus       236 ---a~e~l~hpwf~~~  248 (252)
                         +.+++.||||...
T Consensus       245 ~~~~~~~~~~~~~~~~  260 (318)
T cd05582         245 PDGVEEIKRHPFFSTI  260 (318)
T ss_pred             CCCHHHHhCCCCcCCC
Confidence               7889999999864

Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate

>KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms]

Probab=99.95  E-value=5.5e-29  Score=203.69  Aligned_cols=150  Identities=29%  Similarity=0.451  Sum_probs=117.4

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCC--CccccCCC
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ--NYIVSTRH   78 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~--~~~~~t~~   78 (252)
                      +|++||+.+||+||+||+|||+                           +..++++|.|+|+|.......  ...+||..
T Consensus       299 GLehlH~~~iVYRDLKPeNILL---------------------------Dd~GhvRISDLGLAvei~~g~~~~~rvGT~G  351 (591)
T KOG0986|consen  299 GLEHLHRRRIVYRDLKPENILL---------------------------DDHGHVRISDLGLAVEIPEGKPIRGRVGTVG  351 (591)
T ss_pred             hHHHHHhcceeeccCChhheee---------------------------ccCCCeEeeccceEEecCCCCccccccCccc
Confidence            5899999999999999999999                           667778888888886554443  33589999


Q ss_pred             cccchhhhcCCCCccchhHhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHHHHHHhhcCCCCCCcc
Q 025467           79 YRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEG  158 (252)
Q Consensus        79 y~aPE~l~~~~~~~~~Diws~G~~l~~l~~g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~  158 (252)
                      |||||++....|+.+.|.||+||+||+|+.|..||....+....+.+.+..-..+                         
T Consensus       352 YMAPEvl~ne~Y~~s~Dwf~lGCllYemi~G~sPFr~~KeKvk~eEvdrr~~~~~-------------------------  406 (591)
T KOG0986|consen  352 YMAPEVLQNEVYDFSPDWFSLGCLLYEMIAGHSPFRQRKEKVKREEVDRRTLEDP-------------------------  406 (591)
T ss_pred             ccCHHHHcCCcccCCccHHHHHhHHHHHHcccCchhhhhhhhhHHHHHHHHhcch-------------------------
Confidence            9999999999999999999999999999999999976544322222211111111                         


Q ss_pred             ccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCCCCC---
Q 025467          159 AASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLT---  235 (252)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~t---  235 (252)
                                                                       .+..+..++++++|.+.+|+.||++|..   
T Consensus       407 -------------------------------------------------~ey~~kFS~eakslc~~LL~Kdp~~RLGcrg  437 (591)
T KOG0986|consen  407 -------------------------------------------------EEYSDKFSEEAKSLCEGLLTKDPEKRLGCRG  437 (591)
T ss_pred             -------------------------------------------------hhcccccCHHHHHHHHHHHccCHHHhccCCC
Confidence                                                             1122445679999999999999999985   


Q ss_pred             --HHHHHcCCCCCCcccc
Q 025467          236 --AREALRHPFFTRDHLR  251 (252)
Q Consensus       236 --a~e~l~hpwf~~~~~~  251 (252)
                        +.++.+||||++..-|
T Consensus       438 ~ga~evk~HpfFk~lnw~  455 (591)
T KOG0986|consen  438 EGAQEVKEHPFFKDLNWR  455 (591)
T ss_pred             cCcchhhhCcccccCCHh
Confidence              7799999999987654

>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase

Probab=99.95  E-value=3.3e-28  Score=199.52  Aligned_cols=170  Identities=32%  Similarity=0.549  Sum_probs=117.2

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCC---CccccCC
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ---NYIVSTR   77 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~---~~~~~t~   77 (252)
                      ||+|||++||+||||+|+||+++.+                          +..++++|||.+.......   ....+++
T Consensus       122 ~L~~LH~~~i~H~dl~~~nil~~~~--------------------------~~~~kl~dfg~~~~~~~~~~~~~~~~~~~  175 (295)
T cd07837         122 GVAHCHKHGVMHRDLKPQNLLVDKQ--------------------------KGLLKIADLGLGRAFSIPVKSYTHEIVTL  175 (295)
T ss_pred             HHHHHHHCCeeecCCChHHEEEecC--------------------------CCeEEEeecccceecCCCccccCCccccc
Confidence            6899999999999999999999541                          3456777777765432211   1234677


Q ss_pred             CcccchhhhcC-CCCccchhHhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHHHHHHhhcCCCCCC
Q 025467           78 HYRAPEVILGL-GWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWP  156 (252)
Q Consensus        78 ~y~aPE~l~~~-~~~~~~Diws~G~~l~~l~~g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~  156 (252)
                      .|+|||.+.+. .++.++|+||+||++|+|++|..||.+.+....+..+....+.++...+...........      .+
T Consensus       176 ~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~  249 (295)
T cd07837         176 WYRAPEVLLGSTHYSTPVDIWSVGCIFAEMSRKQPLFPGDSELQQLLHIFKLLGTPTEQVWPGVSKLRDWHE------FP  249 (295)
T ss_pred             CCCChHHhhCCCCCCchHHHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHhCCCChhhCcchhhccchhh------cC
Confidence            89999988754 578999999999999999999999988877776666666655544332211110000000      00


Q ss_pred             ccccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCCCCCH
Q 025467          157 EGAASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTA  236 (252)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~ta  236 (252)
                                      ..                            .+..........+..+.+||.+||+.||.+|||+
T Consensus       250 ----------------~~----------------------------~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~R~~~  285 (295)
T cd07837         250 ----------------QW----------------------------KPQDLSRAVPDLSPEGLDLLQKMLRYDPAKRISA  285 (295)
T ss_pred             ----------------cc----------------------------cchhHHHhccccCHHHHHHHHHHccCChhhcCCH
Confidence                            00                            0000011123456789999999999999999999


Q ss_pred             HHHHcCCCCC
Q 025467          237 REALRHPFFT  246 (252)
Q Consensus       237 ~e~l~hpwf~  246 (252)
                      ++++.||||+
T Consensus       286 ~eil~~~~~~  295 (295)
T cd07837         286 KAALTHPYFD  295 (295)
T ss_pred             HHHhcCCCcC
Confidence            9999999995

Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm

>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases

Probab=99.95  E-value=1e-28  Score=201.80  Aligned_cols=149  Identities=28%  Similarity=0.440  Sum_probs=110.8

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCC--CccccCCC
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ--NYIVSTRH   78 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~--~~~~~t~~   78 (252)
                      ||+|||++||+||||||+||+++.                           ...++|+|||.+.......  ....|+..
T Consensus       114 ~l~~lH~~~ivH~dlkp~Nil~~~---------------------------~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~  166 (285)
T cd05605         114 GLEDLHRERIVYRDLKPENILLDD---------------------------YGHIRISDLGLAVEIPEGETIRGRVGTVG  166 (285)
T ss_pred             HHHHHHHCCcEecCCCHHHEEECC---------------------------CCCEEEeeCCCceecCCCCccccccCCCC
Confidence            689999999999999999999943                           4457777777765432221  22367889


Q ss_pred             cccchhhhcCCCCccchhHhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHHHHHHhhcCCCCCCcc
Q 025467           79 YRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEG  158 (252)
Q Consensus        79 y~aPE~l~~~~~~~~~Diws~G~~l~~l~~g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~  158 (252)
                      |+|||++.+..++.++|+||+||++|++++|..||.+.+.......+.....                   .....    
T Consensus       167 y~aPE~~~~~~~~~~~Diws~G~~l~el~~g~~pf~~~~~~~~~~~~~~~~~-------------------~~~~~----  223 (285)
T cd05605         167 YMAPEVVKNERYTFSPDWWGLGCLIYEMIEGKSPFRQRKEKVKREEVERRVK-------------------EDQEE----  223 (285)
T ss_pred             ccCcHHhcCCCCCccccchhHHHHHHHHHHCCCCCCCCchhhHHHHHHHHhh-------------------hcccc----
Confidence            9999999888899999999999999999999999986544322221111100                   00000    


Q ss_pred             ccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCCCC----
Q 025467          159 AASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRL----  234 (252)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~----  234 (252)
                                                                         .....+..+.+|+.+||+.||.+||    
T Consensus       224 ---------------------------------------------------~~~~~~~~~~~li~~~l~~~P~~R~~~~~  252 (285)
T cd05605         224 ---------------------------------------------------YSEKFSEAARSICRQLLTKDPGFRLGCRG  252 (285)
T ss_pred             ---------------------------------------------------cCcccCHHHHHHHHHHccCCHHHhcCCCC
Confidence                                                               0122456889999999999999999    


Q ss_pred             -CHHHHHcCCCCCCccc
Q 025467          235 -TAREALRHPFFTRDHL  250 (252)
Q Consensus       235 -ta~e~l~hpwf~~~~~  250 (252)
                       |++++++||||.....
T Consensus       253 ~~~~~l~~~~~~~~~~~  269 (285)
T cd05605         253 EGAEEVKAHPFFRTANF  269 (285)
T ss_pred             CCHHHHhcCcCccCCCH
Confidence             9999999999987543

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,

>PTZ00283 serine/threonine protein kinase; Provisional

Probab=99.95  E-value=1e-28  Score=215.68  Aligned_cols=143  Identities=25%  Similarity=0.332  Sum_probs=109.3

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCC-----CCCcccc
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERP-----DQNYIVS   75 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~-----~~~~~~~   75 (252)
                      ||+|||++||+||||||+|||++.                           ++.++|+|||+++....     ......|
T Consensus       155 aL~~lH~~~IiHrDLKP~NILl~~---------------------------~~~vkL~DFGls~~~~~~~~~~~~~~~~G  207 (496)
T PTZ00283        155 AVHHVHSKHMIHRDIKSANILLCS---------------------------NGLVKLGDFGFSKMYAATVSDDVGRTFCG  207 (496)
T ss_pred             HHHHHHhCCEecCCCCHHHEEEeC---------------------------CCCEEEEecccCeeccccccccccccccC
Confidence            689999999999999999999954                           44577777777654322     1223478


Q ss_pred             CCCcccchhhhcCCCCccchhHhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHHHHHHhhcCCCCC
Q 025467           76 TRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDW  155 (252)
Q Consensus        76 t~~y~aPE~l~~~~~~~~~Diws~G~~l~~l~~g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~  155 (252)
                      |+.|+|||++.+..++.++||||+||++|+|++|..||.+.+..+.+..+..  +..                    .  
T Consensus       208 t~~Y~aPE~~~~~~~s~k~DVwSlGvilyeLltG~~Pf~~~~~~~~~~~~~~--~~~--------------------~--  263 (496)
T PTZ00283        208 TPYYVAPEIWRRKPYSKKADMFSLGVLLYELLTLKRPFDGENMEEVMHKTLA--GRY--------------------D--  263 (496)
T ss_pred             CcceeCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHhc--CCC--------------------C--
Confidence            9999999999988899999999999999999999999986554333222110  000                    0  


Q ss_pred             CccccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCCCCC
Q 025467          156 PEGAASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLT  235 (252)
Q Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~t  235 (252)
                                                                           ......++++.+|+.+||+.||.+|||
T Consensus       264 -----------------------------------------------------~~~~~~~~~l~~li~~~L~~dP~~RPs  290 (496)
T PTZ00283        264 -----------------------------------------------------PLPPSISPEMQEIVTALLSSDPKRRPS  290 (496)
T ss_pred             -----------------------------------------------------CCCCCCCHHHHHHHHHHcccChhhCcC
Confidence                                                                 001224568999999999999999999


Q ss_pred             HHHHHcCCCCCC
Q 025467          236 AREALRHPFFTR  247 (252)
Q Consensus       236 a~e~l~hpwf~~  247 (252)
                      +.++++|||++.
T Consensus       291 ~~ell~~p~~~~  302 (496)
T PTZ00283        291 SSKLLNMPICKL  302 (496)
T ss_pred             HHHHHhCHHHHH
Confidence            999999999864

>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase

Probab=99.95  E-value=4.4e-29  Score=208.10  Aligned_cols=146  Identities=31%  Similarity=0.506  Sum_probs=107.6

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCC----CccccC
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ----NYIVST   76 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~----~~~~~t   76 (252)
                      ||+|||+.||+||||||+|||++.                           .+.++|+|||.+.......    ....||
T Consensus       114 aL~~lH~~~i~H~Dlkp~NIll~~---------------------------~~~~kL~Dfg~a~~~~~~~~~~~~~~~gt  166 (330)
T cd05601         114 AIHSVHQMGYVHRDIKPENVLIDR---------------------------TGHIKLADFGSAARLTANKMVNSKLPVGT  166 (330)
T ss_pred             HHHHHHHCCeEcccCchHheEECC---------------------------CCCEEeccCCCCeECCCCCceeeecccCC
Confidence            689999999999999999999954                           4456777777665432221    123688


Q ss_pred             CCcccchhhh------cCCCCccchhHhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHHHHHHhhc
Q 025467           77 RHYRAPEVIL------GLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRR  150 (252)
Q Consensus        77 ~~y~aPE~l~------~~~~~~~~Diws~G~~l~~l~~g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~  150 (252)
                      +.|+|||++.      ...++.++||||+||++|+|++|..||........+..+....                     
T Consensus       167 ~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~i~~~~---------------------  225 (330)
T cd05601         167 PDYIAPEVLTTMNGDGKGTYGVECDWWSLGVIAYEMIYGRSPFHEGTSAKTYNNIMNFQ---------------------  225 (330)
T ss_pred             ccccCHHHhccccccccCCCCCcceeecccceeeeeccCCCCCCCCCHHHHHHHHHcCC---------------------
Confidence            9999999987      3457889999999999999999999998765443333221110                     


Q ss_pred             CCCCCCccccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCC
Q 025467          151 GRLDWPEGAASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDP  230 (252)
Q Consensus       151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP  230 (252)
                      ....++.                                                     ....+.++.+|+.+||+ ||
T Consensus       226 ~~~~~~~-----------------------------------------------------~~~~~~~~~~li~~ll~-~p  251 (330)
T cd05601         226 RFLKFPE-----------------------------------------------------DPKVSSDFLDLIQSLLC-GQ  251 (330)
T ss_pred             CccCCCC-----------------------------------------------------CCCCCHHHHHHHHHHcc-Ch
Confidence            0001110                                                     12345689999999998 99


Q ss_pred             CCCCCHHHHHcCCCCCCc
Q 025467          231 TDRLTAREALRHPFFTRD  248 (252)
Q Consensus       231 ~~R~ta~e~l~hpwf~~~  248 (252)
                      .+|||+.++++||||...
T Consensus       252 ~~R~t~~~l~~h~~~~~~  269 (330)
T cd05601         252 KERLGYEGLCCHPFFSKI  269 (330)
T ss_pred             hhCCCHHHHhCCCCcCCC
Confidence            999999999999999864

Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor

>PLN03225 Serine/threonine-protein kinase SNT7; Provisional

Probab=99.95  E-value=2.6e-28  Score=215.27  Aligned_cols=165  Identities=24%  Similarity=0.357  Sum_probs=105.8

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCC----CCccccC
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD----QNYIVST   76 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~----~~~~~~t   76 (252)
                      ||+|||++||+||||||+|||++.                          ....+||+|||+++.....    .....++
T Consensus       267 aL~yLH~~gIiHRDLKP~NILl~~--------------------------~~~~~KL~DFGlA~~l~~~~~~~~~~~~~t  320 (566)
T PLN03225        267 ALDGLHSTGIVHRDVKPQNIIFSE--------------------------GSGSFKIIDLGAAADLRVGINYIPKEFLLD  320 (566)
T ss_pred             HHHHHHHCCEEeCcCCHHHEEEeC--------------------------CCCcEEEEeCCCccccccccccCCcccccC
Confidence            689999999999999999999953                          2345788888887643221    1234678


Q ss_pred             CCcccchhhhcCC----------------------CCccchhHhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCch
Q 025467           77 RHYRAPEVILGLG----------------------WTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQ  134 (252)
Q Consensus        77 ~~y~aPE~l~~~~----------------------~~~~~Diws~G~~l~~l~~g~~pf~~~~~~~~~~~~~~~~g~~p~  134 (252)
                      +.|+|||.+....                      +..++||||+||++|+|+++..++  .++...+.......+....
T Consensus       321 ~~Y~APE~~~~~~~~~~~~~~~~~~~~sp~l~~~~~~~k~DVwSlGviL~el~~~~~~~--~~~~~~~~~~l~~~~~~~~  398 (566)
T PLN03225        321 PRYAAPEQYIMSTQTPSAPSAPVATALSPVLWQLNLPDRFDIYSAGLIFLQMAFPNLRS--DSNLIQFNRQLKRNDYDLV  398 (566)
T ss_pred             CCccChHHhhccCCCCCCccccccccccchhccccCCCCcccHHHHHHHHHHHhCcCCC--chHHHHHHHHHHhcCCcHH
Confidence            8999999764322                      234569999999999999866553  2333333333333332222


Q ss_pred             HHHHHhhHHHHHHhhcCCCCCCccccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccc
Q 025467          135 HMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHS  214 (252)
Q Consensus       135 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  214 (252)
                      .|......       .    ..      ..+                                       .......+..
T Consensus       399 ~~~~~~~~-------~----~~------~~~---------------------------------------~~~~~~~d~~  422 (566)
T PLN03225        399 AWRKLVEP-------R----AS------PDL---------------------------------------RRGFEVLDLD  422 (566)
T ss_pred             HHHHhhcc-------c----cc------hhh---------------------------------------hhhhhhcccc
Confidence            22111100       0    00      000                                       0000111333


Q ss_pred             hhhHHHHHHHhccCCCCCCCCHHHHHcCCCCCCcc
Q 025467          215 AGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRDH  249 (252)
Q Consensus       215 ~~~~~~ll~~~L~~dP~~R~ta~e~l~hpwf~~~~  249 (252)
                      ....++||.+||+.||++|||++++|+||||....
T Consensus       423 ~~~~~dLi~~mL~~dP~kR~ta~e~L~Hpff~~~~  457 (566)
T PLN03225        423 GGAGWELLKSMMRFKGRQRISAKAALAHPYFDREG  457 (566)
T ss_pred             chHHHHHHHHHccCCcccCCCHHHHhCCcCcCCCC
Confidence            45678999999999999999999999999998754

>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4

Probab=99.95  E-value=4.9e-28  Score=197.48  Aligned_cols=171  Identities=30%  Similarity=0.597  Sum_probs=117.2

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCC---CccccCC
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ---NYIVSTR   77 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~---~~~~~t~   77 (252)
                      ||+|||++||+||||||+||+++.++                           .++|+|||.+.......   ....++.
T Consensus       112 ~l~~LH~~~i~H~dl~p~nil~~~~~---------------------------~~~l~dfg~~~~~~~~~~~~~~~~~~~  164 (286)
T cd07847         112 AVNFCHKHNCIHRDVKPENILITKQG---------------------------QIKLCDFGFARILTGPGDDYTDYVATR  164 (286)
T ss_pred             HHHHHHHCCceecCCChhhEEEcCCC---------------------------cEEECccccceecCCCcccccCccccc
Confidence            58999999999999999999995444                           46666666665432221   1235677


Q ss_pred             CcccchhhhcC-CCCccchhHhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHHHHHHhhcCCCCCC
Q 025467           78 HYRAPEVILGL-GWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWP  156 (252)
Q Consensus        78 ~y~aPE~l~~~-~~~~~~Diws~G~~l~~l~~g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~  156 (252)
                      .|+|||.+.+. .++.++|+||+||+++++++|..||.+.+..+....+....+.........+...       .   +.
T Consensus       165 ~~~aPE~~~~~~~~~~~~Di~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~---~~  234 (286)
T cd07847         165 WYRAPELLVGDTQYGPPVDVWAIGCVFAELLTGQPLWPGKSDVDQLYLIRKTLGDLIPRHQQIFSTN-------Q---FF  234 (286)
T ss_pred             ccCCHHHHhCCCCcCchhhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChHHhhhcccc-------c---cc
Confidence            89999998764 5788999999999999999999999988777777777776665543221111100       0   00


Q ss_pred             ccccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCCCCCH
Q 025467          157 EGAASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTA  236 (252)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~ta  236 (252)
                      ..          ...+..                   ...       . .........+..+.+|+.+||+.||++|||+
T Consensus       235 ~~----------~~~~~~-------------------~~~-------~-~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~  277 (286)
T cd07847         235 KG----------LSIPEP-------------------ETR-------E-PLESKFPNISSPALSFLKGCLQMDPTERLSC  277 (286)
T ss_pred             cc----------ccCCCc-------------------ccc-------c-CHHHHhccCCHHHHHHHHHHhcCCccccCCH
Confidence            00          000000                   000       0 0001123346789999999999999999999


Q ss_pred             HHHHcCCCC
Q 025467          237 REALRHPFF  245 (252)
Q Consensus       237 ~e~l~hpwf  245 (252)
                      .|++.||||
T Consensus       278 ~eil~~~~f  286 (286)
T cd07847         278 EELLEHPYF  286 (286)
T ss_pred             HHHhcCCCC
Confidence            999999998

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio

>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2

Probab=99.95  E-value=7.6e-29  Score=205.89  Aligned_cols=143  Identities=29%  Similarity=0.399  Sum_probs=107.5

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCC---CCCccccCC
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERP---DQNYIVSTR   77 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~---~~~~~~~t~   77 (252)
                      ||+|||++||+||||||+||+++.                           ++.++|+|||++.....   ......||+
T Consensus       108 ~L~~lH~~~ivH~Dlkp~NIll~~---------------------------~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~  160 (321)
T cd05603         108 AIGYLHSLNIIYRDLKPENILLDS---------------------------QGHVVLTDFGLCKEGVEPEETTSTFCGTP  160 (321)
T ss_pred             HHHHHHHCCeEeccCCHHHeEECC---------------------------CCCEEEccCCCCccCCCCCCccccccCCc
Confidence            689999999999999999999954                           44567777776653211   112246889


Q ss_pred             CcccchhhhcCCCCccchhHhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHHHHHHhhcCCCCCCc
Q 025467           78 HYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPE  157 (252)
Q Consensus        78 ~y~aPE~l~~~~~~~~~Diws~G~~l~~l~~g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~  157 (252)
                      .|+|||++.+..++.++||||+||++|+|++|..||.+.+.......+..                       .....  
T Consensus       161 ~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~-----------------------~~~~~--  215 (321)
T cd05603         161 EYLAPEVLRKEPYDRTVDWWCLGAVLYEMLYGLPPFYSRDVSQMYDNILH-----------------------KPLQL--  215 (321)
T ss_pred             ccCCHHHhcCCCCCCcCcccccchhhhhhhcCCCCCCCCCHHHHHHHHhc-----------------------CCCCC--
Confidence            99999999888899999999999999999999999987654332222110                       00100  


Q ss_pred             cccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCCCCCH-
Q 025467          158 GAASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTA-  236 (252)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~ta-  236 (252)
                                                                           ....+..+.+++.+||+.||.+|+++ 
T Consensus       216 -----------------------------------------------------~~~~~~~~~~li~~~l~~~p~~R~~~~  242 (321)
T cd05603         216 -----------------------------------------------------PGGKTVAACDLLVGLLHKDQRRRLGAK  242 (321)
T ss_pred             -----------------------------------------------------CCCCCHHHHHHHHHHccCCHhhcCCCC
Confidence                                                                 12234578999999999999999875 


Q ss_pred             ---HHHHcCCCCCCc
Q 025467          237 ---REALRHPFFTRD  248 (252)
Q Consensus       237 ---~e~l~hpwf~~~  248 (252)
                         .++++||||...
T Consensus       243 ~~~~~~~~~~~~~~~  257 (321)
T cd05603         243 ADFLEIKNHVFFSPI  257 (321)
T ss_pred             CCHHHHhCCCCcCCC
Confidence               599999999753

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.

>KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.95  E-value=3.4e-29  Score=214.29  Aligned_cols=148  Identities=30%  Similarity=0.517  Sum_probs=114.0

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccC---CCCCccccCC
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYER---PDQNYIVSTR   77 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~---~~~~~~~~t~   77 (252)
                      +|+|||.+.|||||||-.|||++                          ...+.+||.|||.++..-   +......||.
T Consensus       687 GLkYLHen~IVHRDIKGDNVLvN--------------------------TySGvlKISDFGTsKRLAginP~TETFTGTL  740 (1226)
T KOG4279|consen  687 GLKYLHENKIVHRDIKGDNVLVN--------------------------TYSGVLKISDFGTSKRLAGINPCTETFTGTL  740 (1226)
T ss_pred             HhhhhhhcceeeccccCCcEEEe--------------------------eccceEEecccccchhhccCCccccccccch
Confidence            58999999999999999999995                          345678888998876532   2233458999


Q ss_pred             CcccchhhhcC--CCCccchhHhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHHHHHHhhcCCCC-
Q 025467           78 HYRAPEVILGL--GWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLD-  154 (252)
Q Consensus        78 ~y~aPE~l~~~--~~~~~~Diws~G~~l~~l~~g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~-  154 (252)
                      .|||||++..+  +|+.++|||||||++.+|.||++||......+.  .|.++                      |.++ 
T Consensus       741 QYMAPEvIDqG~RGYG~aADIWS~GCT~vEMATGrPPF~ElgspqA--AMFkV----------------------GmyKv  796 (1226)
T KOG4279|consen  741 QYMAPEVIDQGPRGYGKAADIWSFGCTMVEMATGRPPFVELGSPQA--AMFKV----------------------GMYKV  796 (1226)
T ss_pred             hhhChHhhccCCcCCCchhhhhhccceeEeeccCCCCeeecCChhH--hhhhh----------------------cceec
Confidence            99999999876  589999999999999999999999965433221  12211                      1111 


Q ss_pred             CCccccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCCCC
Q 025467          155 WPEGAASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRL  234 (252)
Q Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~  234 (252)
                      .|                                                    ..+.+.+.+++.||.+|+..||.+||
T Consensus       797 HP----------------------------------------------------~iPeelsaeak~FilrcFepd~~~R~  824 (1226)
T KOG4279|consen  797 HP----------------------------------------------------PIPEELSAEAKNFILRCFEPDPCDRP  824 (1226)
T ss_pred             CC----------------------------------------------------CCcHHHHHHHHHHHHHHcCCCcccCc
Confidence            11                                                    01123456899999999999999999


Q ss_pred             CHHHHHcCCCCCCccc
Q 025467          235 TAREALRHPFFTRDHL  250 (252)
Q Consensus       235 ta~e~l~hpwf~~~~~  250 (252)
                      +|.++|++||.+..++
T Consensus       825 sA~~LL~DpFlq~~~k  840 (1226)
T KOG4279|consen  825 SAKDLLQDPFLQHNNK  840 (1226)
T ss_pred             cHHHhccCcccccCCC
Confidence            9999999999988744

>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase

Probab=99.95  E-value=5.6e-28  Score=197.86  Aligned_cols=172  Identities=28%  Similarity=0.467  Sum_probs=114.0

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCC---CCccccCC
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD---QNYIVSTR   77 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~---~~~~~~t~   77 (252)
                      ||+|||+.||+|+||||+||+++.                           .+.++|+|||.+......   .....++.
T Consensus       115 ~L~~lH~~~i~H~dlkp~Nil~~~---------------------------~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~  167 (291)
T cd07870         115 GLAYIHGQHILHRDLKPQNLLISY---------------------------LGELKLADFGLARAKSIPSQTYSSEVVTL  167 (291)
T ss_pred             HHHHHHhCCcccCCCChHHEEEcC---------------------------CCcEEEeccccccccCCCCCCCCCccccc
Confidence            689999999999999999999954                           345677777766543221   11235678


Q ss_pred             CcccchhhhcC-CCCccchhHhHHHHHHHHHhCCCCCCCCCh-HHHHHHHHHHhCCCchHHHHHhhHHHHHHhhcCCCCC
Q 025467           78 HYRAPEVILGL-GWTYPCDIWSVGCILVELCTGEALFQTHEN-LEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDW  155 (252)
Q Consensus        78 ~y~aPE~l~~~-~~~~~~Diws~G~~l~~l~~g~~pf~~~~~-~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~  155 (252)
                      .|+|||.+.+. .++.++|+||+||++|++++|..||.+..+ .+.+..+....|.+++.....+...............
T Consensus       168 ~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  247 (291)
T cd07870         168 WYRPPDVLLGATDYSSALDIWGAGCIFIEMLQGQPAFPGVSDVFEQLEKIWTVLGVPTEDTWPGVSKLPNYKPEWFLPCK  247 (291)
T ss_pred             cccCCceeecCCCCCcHHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHHHHHHcCCCChhhhhhhhhcccccchhccccC
Confidence            89999998764 478899999999999999999999976543 3555556666665554433222210000000000000


Q ss_pred             CccccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCCCCC
Q 025467          156 PEGAASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLT  235 (252)
Q Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~t  235 (252)
                      +.      .+.                                       .. ......+..+.+++.+||+.||++|||
T Consensus       248 ~~------~~~---------------------------------------~~-~~~~~~~~~~~~ll~~~l~~dp~~R~t  281 (291)
T cd07870         248 PQ------QLR---------------------------------------VV-WKRLSRPPKAEDLASQMLMMFPKDRIS  281 (291)
T ss_pred             Cc------chh---------------------------------------hh-ccccCCChHHHHHHHHHhCcCcccCcC
Confidence            00      000                                       00 000112568899999999999999999


Q ss_pred             HHHHHcCCCC
Q 025467          236 AREALRHPFF  245 (252)
Q Consensus       236 a~e~l~hpwf  245 (252)
                      +.|++.||||
T Consensus       282 ~~~~l~h~~~  291 (291)
T cd07870         282 AQDALLHPYF  291 (291)
T ss_pred             HHHHhcCCCC
Confidence            9999999998

Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess

>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1

Probab=99.95  E-value=5.4e-28  Score=198.16  Aligned_cols=171  Identities=31%  Similarity=0.537  Sum_probs=119.6

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCC---CccccCC
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ---NYIVSTR   77 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~---~~~~~t~   77 (252)
                      ||+|||++||+|+||||+||+++.                           .+.++++|||.+.......   ....++.
T Consensus       118 aL~~LH~~~i~H~dl~p~nili~~---------------------------~~~~~l~d~g~~~~~~~~~~~~~~~~~~~  170 (293)
T cd07843         118 GVAHLHDNWILHRDLKTSNLLLNN---------------------------RGILKICDFGLAREYGSPLKPYTQLVVTL  170 (293)
T ss_pred             HHHHHHHCCeeeccCCHHHEEECC---------------------------CCcEEEeecCceeeccCCccccccccccc
Confidence            689999999999999999999944                           4456777777665433321   1235677


Q ss_pred             CcccchhhhcCC-CCccchhHhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHHHHHHhhcCCCCCC
Q 025467           78 HYRAPEVILGLG-WTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWP  156 (252)
Q Consensus        78 ~y~aPE~l~~~~-~~~~~Diws~G~~l~~l~~g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~  156 (252)
                      .|+|||.+.+.. ++.++|+||+||+++++++|..||.+.+.......+....+.++...+.........    ....+.
T Consensus       171 ~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~  246 (293)
T cd07843         171 WYRAPELLLGAKEYSTAIDMWSVGCIFAELLTKKPLFPGKSEIDQLNKIFKLLGTPTEKIWPGFSELPGA----KKKTFT  246 (293)
T ss_pred             cccCchhhcCCccccchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhccchh----cccccc
Confidence            899999987654 688999999999999999999999988888888888777776655443322110000    000000


Q ss_pred             ccccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhcccc-chhhHHHHHHHhccCCCCCCCC
Q 025467          157 EGAASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDH-SAGDLTHLLQGLLRYDPTDRLT  235 (252)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ll~~~L~~dP~~R~t  235 (252)
                      ..              .                             ........... .++.+.+||.+||+.||++|||
T Consensus       247 ~~--------------~-----------------------------~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~t  283 (293)
T cd07843         247 KY--------------P-----------------------------YNQLRKKFPALSLSDNGFDLLNRLLTYDPAKRIS  283 (293)
T ss_pred             cc--------------c-----------------------------chhhhccccccCCChHHHHHHHHHhccCccccCC
Confidence            00              0                             00000000111 4678999999999999999999


Q ss_pred             HHHHHcCCCC
Q 025467          236 AREALRHPFF  245 (252)
Q Consensus       236 a~e~l~hpwf  245 (252)
                      ++|+|.||||
T Consensus       284 ~~ell~~~~f  293 (293)
T cd07843         284 AEDALKHPYF  293 (293)
T ss_pred             HHHHhcCCCC
Confidence            9999999998

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the

>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta

Probab=99.95  E-value=1.2e-28  Score=205.16  Aligned_cols=88  Identities=28%  Similarity=0.542  Sum_probs=72.8

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCC---CCCccccCC
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERP---DQNYIVSTR   77 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~---~~~~~~~t~   77 (252)
                      ||+|||++||+||||||+|||++.                           .+.++|+|||++.....   .....+||+
T Consensus       108 al~~lH~~~ivHrDlkp~Nili~~---------------------------~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~  160 (327)
T cd05617         108 ALNFLHERGIIYRDLKLDNVLLDA---------------------------DGHIKLTDYGMCKEGLGPGDTTSTFCGTP  160 (327)
T ss_pred             HHHHHHHCCeeccCCCHHHEEEeC---------------------------CCCEEEeccccceeccCCCCceecccCCc
Confidence            689999999999999999999954                           44567777777653211   122346899


Q ss_pred             CcccchhhhcCCCCccchhHhHHHHHHHHHhCCCCCCC
Q 025467           78 HYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQT  115 (252)
Q Consensus        78 ~y~aPE~l~~~~~~~~~Diws~G~~l~~l~~g~~pf~~  115 (252)
                      .|+|||++.+..++.++||||+||++|+|++|..||..
T Consensus       161 ~y~aPE~~~~~~~~~~~DiwslGvil~ell~g~~pf~~  198 (327)
T cd05617         161 NYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDI  198 (327)
T ss_pred             ccCCHHHHCCCCCCchheeehhHHHHHHHHhCCCCCCc
Confidence            99999999988899999999999999999999999964

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways

>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase

Probab=99.95  E-value=2.6e-28  Score=203.40  Aligned_cols=174  Identities=35%  Similarity=0.583  Sum_probs=124.5

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCC------CCccc
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD------QNYIV   74 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~------~~~~~   74 (252)
                      ||+|||++||+||||||.||++..++                           .++|+|||.+......      .....
T Consensus       115 ~l~~LH~~gi~H~dlkp~nili~~~~---------------------------~~~L~dfg~~~~~~~~~~~~~~~~~~~  167 (330)
T cd07834         115 GLKYLHSANVIHRDLKPSNILVNSNC---------------------------DLKICDFGLARGVDPDEDEKGFLTEYV  167 (330)
T ss_pred             HHHHHHhCCeecCCCCHHHEEEcCCC---------------------------CEEEcccCceEeecccccccccccccc
Confidence            68999999999999999999995544                           4566666655433222      12235


Q ss_pred             cCCCcccchhhhcC-CCCccchhHhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhH-HHHHHhhcCC
Q 025467           75 STRHYRAPEVILGL-GWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDR-HAEKYVRRGR  152 (252)
Q Consensus        75 ~t~~y~aPE~l~~~-~~~~~~Diws~G~~l~~l~~g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~-~~~~~~~~~~  152 (252)
                      ++..|+|||.+.+. .++.++|+||+||+++++++|..||.+.+..+....+....+.++...+..... ....+.....
T Consensus       168 ~~~~y~aPE~~~~~~~~~~~sDi~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~  247 (330)
T cd07834         168 VTRWYRAPELLLSSSRYTKAIDIWSVGCIFAELLTRKPLFPGRDYIDQLNLIVEVLGTPSEEDLKFITSEKARNYLKSLP  247 (330)
T ss_pred             cccCcCCceeeecccCCCcchhHHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHhcCCCChhHhhhccccchhhHHhhcc
Confidence            68889999999887 788999999999999999999999998888888888888888776554332111 0111100000


Q ss_pred             CCCCccccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCC
Q 025467          153 LDWPEGAASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTD  232 (252)
Q Consensus       153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~  232 (252)
                      ...                                                ...........+.++.+|+.+||++||++
T Consensus       248 ~~~------------------------------------------------~~~~~~~~~~~~~~~~~li~~~l~~~P~~  279 (330)
T cd07834         248 KKP------------------------------------------------KKPLSKLFPGASPEAIDLLEKMLVFDPKK  279 (330)
T ss_pred             cCC------------------------------------------------cchhHHhcccCCHHHHHHHHHHccCChhh
Confidence            000                                                00000112335678999999999999999


Q ss_pred             CCCHHHHHcCCCCCCcc
Q 025467          233 RLTAREALRHPFFTRDH  249 (252)
Q Consensus       233 R~ta~e~l~hpwf~~~~  249 (252)
                      |||+++++.||||++.+
T Consensus       280 Rpt~~~ll~~~~~~~~~  296 (330)
T cd07834         280 RITADEALAHPYLAQLH  296 (330)
T ss_pred             CCCHHHHHhCccHHhhc
Confidence            99999999999998654

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and

>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases

Probab=99.95  E-value=4.9e-28  Score=200.30  Aligned_cols=181  Identities=33%  Similarity=0.531  Sum_probs=116.2

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCC------Cccc
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ------NYIV   74 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~------~~~~   74 (252)
                      ||+|||+.+|+||||||+||+++.++                       ...+.++++|||.+.......      ....
T Consensus       120 ~l~~lH~~~i~h~dlkp~Nil~~~~~-----------------------~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~  176 (316)
T cd07842         120 GVHYLHSNWVLHRDLKPANILVMGEG-----------------------PERGVVKIGDLGLARLFNAPLKPLADLDPVV  176 (316)
T ss_pred             HHHHHHhCCEeeCCCCHHHEEEcCCC-----------------------CccceEEECCCccccccCCCcccccccCCcc
Confidence            68999999999999999999996621                       124556777777665432211      1235


Q ss_pred             cCCCcccchhhhcC-CCCccchhHhHHHHHHHHHhCCCCCCCCChH---------HHHHHHHHHhCCCchHHHHHhhHHH
Q 025467           75 STRHYRAPEVILGL-GWTYPCDIWSVGCILVELCTGEALFQTHENL---------EHLAMMERVLGPLPQHMLKRVDRHA  144 (252)
Q Consensus        75 ~t~~y~aPE~l~~~-~~~~~~Diws~G~~l~~l~~g~~pf~~~~~~---------~~~~~~~~~~g~~p~~~~~~~~~~~  144 (252)
                      ++..|+|||++.+. .++.++|+||+||+++++++|..||.+....         ..+..+...++.+....+....+..
T Consensus       177 ~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~  256 (316)
T cd07842         177 VTIWYRAPELLLGARHYTKAIDIWAIGCIFAELLTLEPIFKGREAKIKKSNPFQRDQLERIFEVLGTPTEKDWPDIKKMP  256 (316)
T ss_pred             ccccccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhcCCCCcCCcccccccchhHHHHHHHHHHHhCCCchhHHHHHhhcc
Confidence            67889999998764 5789999999999999999999999765432         2444555555554443332221111


Q ss_pred             HHHhhcCCCCCCccccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHH
Q 025467          145 EKYVRRGRLDWPEGAASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQG  224 (252)
Q Consensus       145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~  224 (252)
                      ......                ........                    ......     .........+..+.+++.+
T Consensus       257 ~~~~~~----------------~~~~~~~~--------------------~~~~~~-----~~~~~~~~~~~~~~~~i~~  295 (316)
T cd07842         257 EYDTLM----------------KDFKTKTY--------------------PSNSLA-----KWMEKHKKPDSQGFDLLRK  295 (316)
T ss_pred             cchhhh----------------hhccCCCC--------------------CCccHH-----HHHHhccCCCHHHHHHHHH
Confidence            000000                00000000                    000000     0001113567789999999


Q ss_pred             hccCCCCCCCCHHHHHcCCCC
Q 025467          225 LLRYDPTDRLTAREALRHPFF  245 (252)
Q Consensus       225 ~L~~dP~~R~ta~e~l~hpwf  245 (252)
                      ||++||++|||+.|+++||||
T Consensus       296 ~l~~~P~~Rps~~eil~~~~f  316 (316)
T cd07842         296 LLEYDPTKRITAEEALEHPYF  316 (316)
T ss_pred             HhcCCcccCcCHHHHhcCCCC
Confidence            999999999999999999998

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the

>KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=99.95  E-value=1.2e-28  Score=193.94  Aligned_cols=166  Identities=27%  Similarity=0.440  Sum_probs=117.3

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccC----------CCC
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYER----------PDQ   70 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~----------~~~   70 (252)
                      ||.|||..||+||||||+|||-...+.                        -..+|||||.+.....          +..
T Consensus       188 aLdFlH~kgIAHRDlKPENiLC~~pn~------------------------vsPvKiCDfDLgSg~k~~~~~spastP~L  243 (463)
T KOG0607|consen  188 ALDFLHTKGIAHRDLKPENILCESPNK------------------------VSPVKICDFDLGSGIKLNNDCSPASTPEL  243 (463)
T ss_pred             HHHHHhhcCcccccCCccceeecCCCC------------------------cCceeeeccccccccccCCCCCCCCCccc
Confidence            689999999999999999999866542                        2245777776543211          111


Q ss_pred             CccccCCCcccchhhhc-----CCCCccchhHhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHHHH
Q 025467           71 NYIVSTRHYRAPEVILG-----LGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAE  145 (252)
Q Consensus        71 ~~~~~t~~y~aPE~l~~-----~~~~~~~Diws~G~~l~~l~~g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~  145 (252)
                      ...+|+..|||||+...     ..|+.++|.||+||++|-|++|.+||.|.-..+.-    .-.|.+....    .+...
T Consensus       244 ~tPvGSAEfMAPEVVd~fv~qA~~YDKrCDlwSLGvIlYImLsGYpPFvG~Cg~dCG----WdrGe~Cr~C----Q~~LF  315 (463)
T KOG0607|consen  244 LTPVGSAEFMAPEVVDVFVDQATFYDKRCDLWSLGVILYIMLSGYPPFVGHCGADCG----WDRGEVCRVC----QNKLF  315 (463)
T ss_pred             cCcccchhhcchhHHhhhccccccccccccHHHHHHHHHHHHhCCCCccCccCCcCC----ccCCCccHHH----HHHHH
Confidence            23578889999998752     24899999999999999999999999765321110    0011111111    11112


Q ss_pred             HHhhcCCCCCCccccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHh
Q 025467          146 KYVRRGRLDWPEGAASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGL  225 (252)
Q Consensus       146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~  225 (252)
                      ..+.+|.+.+|+                                                   ..|..++.+++||++.+
T Consensus       316 esIQEGkYeFPd---------------------------------------------------kdWahIS~eakdlisnL  344 (463)
T KOG0607|consen  316 ESIQEGKYEFPD---------------------------------------------------KDWAHISSEAKDLISNL  344 (463)
T ss_pred             HHHhccCCcCCh---------------------------------------------------hhhHHhhHHHHHHHHHH
Confidence            233455555553                                                   34677888999999999


Q ss_pred             ccCCCCCCCCHHHHHcCCCCCCcc
Q 025467          226 LRYDPTDRLTAREALRHPFFTRDH  249 (252)
Q Consensus       226 L~~dP~~R~ta~e~l~hpwf~~~~  249 (252)
                      |..|+..|.+|.+++.|||+.+..
T Consensus       345 lvrda~~rlsa~~vlnhPw~~~~~  368 (463)
T KOG0607|consen  345 LVRDAKQRLSAAQVLNHPWVQRCA  368 (463)
T ss_pred             HhccHHhhhhhhhccCCccccccc
Confidence            999999999999999999998864

>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1

Probab=99.95  E-value=9.6e-28  Score=199.86  Aligned_cols=175  Identities=30%  Similarity=0.585  Sum_probs=128.6

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCCCccccCCCcc
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYR   80 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~~~~~~t~~y~   80 (252)
                      ||+|||+.||+||||+|.||++..                           ...++++|||.+...........++..|+
T Consensus       120 aL~~LH~~~iiH~dl~p~Nili~~---------------------------~~~~~l~dfg~~~~~~~~~~~~~~~~~y~  172 (328)
T cd07856         120 GLKYVHSAGVVHRDLKPSNILINE---------------------------NCDLKICDFGLARIQDPQMTGYVSTRYYR  172 (328)
T ss_pred             HHHHHHhCCcccCCCCHHHEeECC---------------------------CCCEEeCccccccccCCCcCCCccccccc
Confidence            689999999999999999999943                           44567777777664433333346778899


Q ss_pred             cchhhhc-CCCCccchhHhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHHHH-HHhhcCCCCCCcc
Q 025467           81 APEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAE-KYVRRGRLDWPEG  158 (252)
Q Consensus        81 aPE~l~~-~~~~~~~Diws~G~~l~~l~~g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~-~~~~~~~~~~~~~  158 (252)
                      |||.+.+ ..++.++|+||+||+++++++|..||.+.+.......+...+|.+|+++...+..... .+........+  
T Consensus       173 aPE~~~~~~~~~~~~Dv~slG~il~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--  250 (328)
T cd07856         173 APEIMLTWQKYDVEVDIWSAGCIFAEMLEGKPLFPGKDHVNQFSIITDLLGTPPDDVINTICSENTLRFVQSLPKREP--  250 (328)
T ss_pred             CceeeeccCCcCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhccchhhHHHHhhccccCC--
Confidence            9998766 4688999999999999999999999988887778888889999999887654422110 01000000000  


Q ss_pred             ccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCCCCCHHH
Q 025467          159 AASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTARE  238 (252)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~ta~e  238 (252)
                                                                    ..........+..+.+++.+||+.+|++|||+++
T Consensus       251 ----------------------------------------------~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~e  284 (328)
T cd07856         251 ----------------------------------------------VPFSEKFKNADPSAIDLLEKMLVFDPQKRISAAE  284 (328)
T ss_pred             ----------------------------------------------CcHHHHcCCCCHHHHHHHHHHcCCChhhCCCHHH
Confidence                                                          0000111234578999999999999999999999


Q ss_pred             HHcCCCCCCccc
Q 025467          239 ALRHPFFTRDHL  250 (252)
Q Consensus       239 ~l~hpwf~~~~~  250 (252)
                      ++.||||...+.
T Consensus       285 ll~~~~~~~~~~  296 (328)
T cd07856         285 ALAHPYLAPYHD  296 (328)
T ss_pred             HhcCCccccccC
Confidence            999999976543

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U

>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2

Probab=99.95  E-value=8.9e-29  Score=208.62  Aligned_cols=171  Identities=27%  Similarity=0.402  Sum_probs=113.4

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCcc-ccCCCCCCceEEeecCCcc------------ccC
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSY-FKRMPKSSAIKVIDFGSTT------------YER   67 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~-~~~~~~~~~~~l~dfg~~~------------~~~   67 (252)
                      ||+|||++||+||||||+|||++.++.++++|||++......... .........  -.++....            ...
T Consensus       113 ~L~~lH~~givHrDLkp~NIli~~~~~vkL~DfG~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~  190 (360)
T cd05627         113 AIDAIHQLGFIHRDIKPDNLLLDAKGHVKLSDFGLCTGLKKAHRTEFYRNLTHNP--PSDFSFQNMNSKRKAETWKKNRR  190 (360)
T ss_pred             HHHHHHHCCeEccCCCHHHEEECCCCCEEEeeccCCcccccccccccccccccCC--ccccccccccccccccccccccc
Confidence            689999999999999999999988888899999887543221110 000000000  00000000            000


Q ss_pred             CCCCccccCCCcccchhhhcCCCCccchhHhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHHHHHH
Q 025467           68 PDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKY  147 (252)
Q Consensus        68 ~~~~~~~~t~~y~aPE~l~~~~~~~~~Diws~G~~l~~l~~g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~  147 (252)
                      ......+||+.|+|||++.+..++.++|+||+||++|+|++|..||.+.+.......+.....                 
T Consensus       191 ~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvilyel~tG~~Pf~~~~~~~~~~~i~~~~~-----------------  253 (360)
T cd05627         191 QLAYSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYPPFCSETPQETYRKVMNWKE-----------------  253 (360)
T ss_pred             ccccccCCCccccCHHHHcCCCCCCcceeccccceeeecccCCCCCCCCCHHHHHHHHHcCCC-----------------
Confidence            001124789999999999998999999999999999999999999987654433332211000                 


Q ss_pred             hhcCCCCCCccccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhcc
Q 025467          148 VRRGRLDWPEGAASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLR  227 (252)
Q Consensus       148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~  227 (252)
                          .+..+.                                                     ....+.++++||.+|+.
T Consensus       254 ----~~~~p~-----------------------------------------------------~~~~s~~~~~li~~l~~  276 (360)
T cd05627         254 ----TLVFPP-----------------------------------------------------EVPISEKAKDLILRFCT  276 (360)
T ss_pred             ----ceecCC-----------------------------------------------------CCCCCHHHHHHHHHhcc
Confidence                000110                                                     01245688999999874


Q ss_pred             CCCCCCC---CHHHHHcCCCCCCc
Q 025467          228 YDPTDRL---TAREALRHPFFTRD  248 (252)
Q Consensus       228 ~dP~~R~---ta~e~l~hpwf~~~  248 (252)
                       ||.+|+   +++++++||||++.
T Consensus       277 -~p~~R~~~~~~~ei~~hp~f~~~  299 (360)
T cd05627         277 -DSENRIGSNGVEEIKSHPFFEGV  299 (360)
T ss_pred             -ChhhcCCCCCHHHHhcCCCCCCC
Confidence             999998   48999999999875

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul

>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha

Probab=99.95  E-value=1.9e-28  Score=203.97  Aligned_cols=100  Identities=23%  Similarity=0.406  Sum_probs=72.1

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCcccc-CCCCCccccCCCc
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYE-RPDQNYIVSTRHY   79 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~-~~~~~~~~~t~~y   79 (252)
                      ||+|||++||+||||||+|||++.++..++.||+....                  +.+.|..... ........++..|
T Consensus       113 ~L~~LH~~~iiH~dlkp~Nil~~~~~~~~l~~~~~~~~------------------~~~~~~~~~~~~~~~~~~~~~~~y  174 (327)
T cd08227         113 ALDYIHHMGYVHRSVKASHILISVDGKVYLSGLRSNLS------------------MINHGQRLRVVHDFPKYSVKVLPW  174 (327)
T ss_pred             HHHHHHHCCEecCCCChhhEEEecCCcEEEcccchhhc------------------cccccccccccccccccccceecc
Confidence            68999999999999999999998777666666653311                  1111111100 0111223566789


Q ss_pred             ccchhhhc--CCCCccchhHhHHHHHHHHHhCCCCCCCCCh
Q 025467           80 RAPEVILG--LGWTYPCDIWSVGCILVELCTGEALFQTHEN  118 (252)
Q Consensus        80 ~aPE~l~~--~~~~~~~Diws~G~~l~~l~~g~~pf~~~~~  118 (252)
                      +|||++.+  ..++.++||||+||++|++++|..||.....
T Consensus       175 ~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~  215 (327)
T cd08227         175 LSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPA  215 (327)
T ss_pred             cChHHhhcccCCCCchhhHHHHHHHHHHHHHCCCCCCCcch
Confidence            99999976  3588999999999999999999999976544

Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype

>PLN00181 protein SPA1-RELATED; Provisional

Probab=99.95  E-value=1.1e-28  Score=226.86  Aligned_cols=106  Identities=17%  Similarity=0.238  Sum_probs=86.9

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCC-----------
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD-----------   69 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~-----------   69 (252)
                      ||+|||++||+||||||+|||+...+.+++.||+.+.....        +....+|++|||+++.....           
T Consensus        92 al~~lH~~gIvHrDlKP~NiLl~~~~~~k~~d~~~~~~~~~--------~~~~~~ki~DfG~a~~~~~~~~~~~~~~~~~  163 (793)
T PLN00181         92 IVNAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGS--------DEDATTKSREIGSSRREEILSERRIEKLEEV  163 (793)
T ss_pred             HHHHHHhCCeeeccCCchhEEEcccCcEEEeeccccCcccc--------cccCcccccccccccccccccccchhhhhcc
Confidence            68999999999999999999999999999999998765322        23456899999998642110           


Q ss_pred             --------CCccccCCCcccchhhhcCCCCccchhHhHHHHHHHHHhCCCCCC
Q 025467           70 --------QNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQ  114 (252)
Q Consensus        70 --------~~~~~~t~~y~aPE~l~~~~~~~~~Diws~G~~l~~l~~g~~pf~  114 (252)
                              ....+||+.|+|||++.+..|+.++|||||||++|+|++|..|+.
T Consensus       164 ~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDVwSlGviL~ELl~~~~~~~  216 (793)
T PLN00181        164 KKQPFPMKQILAMEMSWYTSPEEDNGSSSNCASDVYRLGVLLFELFCPVSSRE  216 (793)
T ss_pred             ccCCCcccccccCCCcceEChhhhccCCCCchhhhhhHHHHHHHHhhCCCchh
Confidence                    011357889999999999899999999999999999999888764

>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor

Probab=99.95  E-value=1.1e-28  Score=209.33  Aligned_cols=172  Identities=27%  Similarity=0.411  Sum_probs=112.8

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCC--ccccCCCCCCceEEeec-------C--------Cc
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDS--SYFKRMPKSSAIKVIDF-------G--------ST   63 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~--~~~~~~~~~~~~~l~df-------g--------~~   63 (252)
                      ||+|||++||+||||||+|||++.++.++++|||++.......  ..... .........+.       .        ..
T Consensus       113 al~~lH~~~ivHrDlkp~Nill~~~~~ikL~DFG~a~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  191 (376)
T cd05598         113 AIESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDSKYYQK-GDHHRQDSMEPSEEWSEIDRCRLKPLERR  191 (376)
T ss_pred             HHHHHHHCCeEeCCCCHHHEEECCCCCEEEEeCCCCcccccccccccccc-ccccccccccccccccccccccccchhhh
Confidence            6899999999999999999999988888899998864321100  00000 00000000000       0        00


Q ss_pred             c---ccCCCCCccccCCCcccchhhhcCCCCccchhHhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHh
Q 025467           64 T---YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRV  140 (252)
Q Consensus        64 ~---~~~~~~~~~~~t~~y~aPE~l~~~~~~~~~Diws~G~~l~~l~~g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~  140 (252)
                      .   .........+||+.|+|||++.+..++.++||||+||++|+|++|..||.+.+..+....+.....          
T Consensus       192 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~----------  261 (376)
T cd05598         192 RKRQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEMLVGQPPFLADTPAETQLKVINWET----------  261 (376)
T ss_pred             hhhhcccccccccCCCccccCHHHHcCCCCCcceeeeeccceeeehhhCCCCCCCCCHHHHHHHHhccCc----------
Confidence            0   000011224789999999999988899999999999999999999999987654433222111000          


Q ss_pred             hHHHHHHhhcCCCCCCccccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHH
Q 025467          141 DRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTH  220 (252)
Q Consensus       141 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  220 (252)
                                 .+..                                                     ......+.++.+
T Consensus       262 -----------~~~~-----------------------------------------------------~~~~~~s~~~~~  277 (376)
T cd05598         262 -----------TLHI-----------------------------------------------------PSQAKLSREASD  277 (376)
T ss_pred             -----------cccC-----------------------------------------------------CCCCCCCHHHHH
Confidence                       0000                                                     001234568899


Q ss_pred             HHHHhccCCCCCCC---CHHHHHcCCCCCCc
Q 025467          221 LLQGLLRYDPTDRL---TAREALRHPFFTRD  248 (252)
Q Consensus       221 ll~~~L~~dP~~R~---ta~e~l~hpwf~~~  248 (252)
                      ||.+|+ .+|.+|+   |+.++++||||+..
T Consensus       278 li~~l~-~~p~~R~~~~t~~ell~h~~~~~~  307 (376)
T cd05598         278 LILRLC-CGAEDRLGKNGADEIKAHPFFKGI  307 (376)
T ss_pred             HHHHHh-cCHhhcCCCCCHHHHhCCCCcCCC
Confidence            999976 5999999   99999999999874

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.

>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1

Probab=99.95  E-value=6e-28  Score=201.50  Aligned_cols=91  Identities=32%  Similarity=0.539  Sum_probs=73.2

Q ss_pred             Chhhhhc-cCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCC-CCccccCCC
Q 025467            1 MFAVMHD-LCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD-QNYIVSTRH   78 (252)
Q Consensus         1 aL~~lH~-~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~-~~~~~~t~~   78 (252)
                      ||+|||+ .+|+||||||+|||++.                           .+.++|+|||++...... .....|+..
T Consensus       115 ~l~~lH~~~~ivH~dlkp~Nili~~---------------------------~~~~kL~Dfg~~~~~~~~~~~~~~~~~~  167 (333)
T cd06650         115 GLTYLREKHKIMHRDVKPSNILVNS---------------------------RGEIKLCDFGVSGQLIDSMANSFVGTRS  167 (333)
T ss_pred             HHHHHHhcCCEEecCCChhhEEEcC---------------------------CCCEEEeeCCcchhhhhhccccCCCCcc
Confidence            5899997 47999999999999954                           345677777776543221 223468889


Q ss_pred             cccchhhhcCCCCccchhHhHHHHHHHHHhCCCCCCCCCh
Q 025467           79 YRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHEN  118 (252)
Q Consensus        79 y~aPE~l~~~~~~~~~Diws~G~~l~~l~~g~~pf~~~~~  118 (252)
                      |+|||++.+..++.++|+||+||++|++++|..||.....
T Consensus       168 y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~  207 (333)
T cd06650         168 YMSPERLQGTHYSVQSDIWSMGLSLVEMAIGRYPIPPPDA  207 (333)
T ss_pred             ccCHHHhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcch
Confidence            9999999888899999999999999999999999976543

Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst

>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1

Probab=99.95  E-value=3.5e-28  Score=205.64  Aligned_cols=148  Identities=28%  Similarity=0.505  Sum_probs=107.9

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCC----CCccccC
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD----QNYIVST   76 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~----~~~~~~t   76 (252)
                      ||+|||++||+||||||+|||++.                           .+.++|+|||++......    ....+||
T Consensus       154 aL~~LH~~~ivHrDLkp~NIll~~---------------------------~~~ikL~DfG~a~~~~~~~~~~~~~~~gt  206 (371)
T cd05622         154 ALDAIHSMGFIHRDVKPDNMLLDK---------------------------SGHLKLADFGTCMKMNKEGMVRCDTAVGT  206 (371)
T ss_pred             HHHHHHHCCEEeCCCCHHHEEECC---------------------------CCCEEEEeCCceeEcCcCCcccccCcccC
Confidence            689999999999999999999943                           445778888877643321    1234689


Q ss_pred             CCcccchhhhcCC----CCccchhHhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHHHHHHhhcCC
Q 025467           77 RHYRAPEVILGLG----WTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGR  152 (252)
Q Consensus        77 ~~y~aPE~l~~~~----~~~~~Diws~G~~l~~l~~g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~  152 (252)
                      +.|+|||++.+..    ++.++||||+||++|+|++|..||.+.+.......+......                     
T Consensus       207 ~~y~aPE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~---------------------  265 (371)
T cd05622         207 PDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHKNS---------------------  265 (371)
T ss_pred             ccccCHHHHhccCCCccCCCccceeehhHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCc---------------------
Confidence            9999999997542    788999999999999999999999876654333332211100                     


Q ss_pred             CCCCccccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCC
Q 025467          153 LDWPEGAASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTD  232 (252)
Q Consensus       153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~  232 (252)
                      +.++.                                                     ....+..+++|+.+||..++.+
T Consensus       266 ~~~~~-----------------------------------------------------~~~~s~~~~~li~~~L~~~~~r  292 (371)
T cd05622         266 LTFPD-----------------------------------------------------DNDISKEAKNLICAFLTDREVR  292 (371)
T ss_pred             ccCCC-----------------------------------------------------cCCCCHHHHHHHHHHcCChhhh
Confidence            11110                                                     1234568999999999843433


Q ss_pred             --CCCHHHHHcCCCCCCcc
Q 025467          233 --RLTAREALRHPFFTRDH  249 (252)
Q Consensus       233 --R~ta~e~l~hpwf~~~~  249 (252)
                        |++++++++||||+..+
T Consensus       293 ~~r~~~~ei~~h~~~~~~~  311 (371)
T cd05622         293 LGRNGVEEIKRHLFFKNDQ  311 (371)
T ss_pred             cCCCCHHHHhcCcccCCCC
Confidence              78999999999998754

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an

>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase

Probab=99.95  E-value=6.7e-28  Score=196.72  Aligned_cols=171  Identities=36%  Similarity=0.649  Sum_probs=118.3

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCC----CccccC
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ----NYIVST   76 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~----~~~~~t   76 (252)
                      ||+|||+.|++|+||||+||+++.                           .+.++++|||.+.......    ....++
T Consensus       111 ~l~~lH~~~i~H~dl~p~ni~~~~---------------------------~~~~~l~dfg~~~~~~~~~~~~~~~~~~~  163 (286)
T cd07832         111 GVAYMHANGIMHRDLKPANLLISA---------------------------DGVLKIADFGLARLFSEEEPRLYSHQVAT  163 (286)
T ss_pred             HHHHHHHCCeecCCcCHHHEEEcC---------------------------CCcEEEeeeeecccccCCCCCccccccCc
Confidence            689999999999999999999954                           4456777777665443321    223678


Q ss_pred             CCcccchhhhcC-CCCccchhHhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHHHHHHhhcCCCCC
Q 025467           77 RHYRAPEVILGL-GWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDW  155 (252)
Q Consensus        77 ~~y~aPE~l~~~-~~~~~~Diws~G~~l~~l~~g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~  155 (252)
                      ..|+|||.+.+. .++.++||||+||+++++++|.++|.+..+...+..+....+.+....+........+    +...+
T Consensus       164 ~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~  239 (286)
T cd07832         164 RWYRAPELLYGARKYDPGVDLWAVGCIFAELLNGSPLFPGENDIEQLAIVFRTLGTPNEETWPGLTSLPDY----NKITF  239 (286)
T ss_pred             ccccCceeeeccccCCchhHHHHHHHHHHHHHcCCcCcCCCCHHHHHHHHHHHcCCCChHHHhhccCcchh----hcccC
Confidence            899999998654 4688999999999999999999999888777777777776665543222111100000    00000


Q ss_pred             CccccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCCCCC
Q 025467          156 PEGAASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLT  235 (252)
Q Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~t  235 (252)
                      +...                                            ...........+..+.+|+.+||..||++|||
T Consensus       240 ~~~~--------------------------------------------~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~  275 (286)
T cd07832         240 PESK--------------------------------------------PIPLEEIFPDASPEALDLLKGLLVYDPSKRLS  275 (286)
T ss_pred             CCCC--------------------------------------------cchHHHhCCCccHHHHHHHHHHhccChhhCCC
Confidence            0000                                            00000112334578999999999999999999


Q ss_pred             HHHHHcCCCCC
Q 025467          236 AREALRHPFFT  246 (252)
Q Consensus       236 a~e~l~hpwf~  246 (252)
                      ++++|+||||.
T Consensus       276 ~~~~l~h~~~~  286 (286)
T cd07832         276 AAEALRHPYFT  286 (286)
T ss_pred             HHHHhhCcCcC
Confidence            99999999995

Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea

>PTZ00267 NIMA-related protein kinase; Provisional

Probab=99.95  E-value=2.6e-28  Score=212.71  Aligned_cols=143  Identities=27%  Similarity=0.383  Sum_probs=109.7

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCC-----CCcccc
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD-----QNYIVS   75 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~-----~~~~~~   75 (252)
                      ||+|||++||+||||||+|||++.                           .+.++|+|||++......     ....+|
T Consensus       181 aL~~lH~~~ivHrDlkp~NIll~~---------------------------~~~~kL~DFgla~~~~~~~~~~~~~~~~g  233 (478)
T PTZ00267        181 ALDEVHSRKMMHRDLKSANIFLMP---------------------------TGIIKLGDFGFSKQYSDSVSLDVASSFCG  233 (478)
T ss_pred             HHHHHHhCCEEECCcCHHhEEECC---------------------------CCcEEEEeCcCceecCCccccccccccCC
Confidence            689999999999999999999944                           445777777777643322     122468


Q ss_pred             CCCcccchhhhcCCCCccchhHhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHHHHHHhhcCCCCC
Q 025467           76 TRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDW  155 (252)
Q Consensus        76 t~~y~aPE~l~~~~~~~~~Diws~G~~l~~l~~g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~  155 (252)
                      |+.|+|||++.+..++.++||||+||++|+|++|..||.+.+....+..+..  +..+                    ..
T Consensus       234 t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~Pf~~~~~~~~~~~~~~--~~~~--------------------~~  291 (478)
T PTZ00267        234 TPYYLAPELWERKRYSKKADMWSLGVILYELLTLHRPFKGPSQREIMQQVLY--GKYD--------------------PF  291 (478)
T ss_pred             CccccCHhHhCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHh--CCCC--------------------CC
Confidence            9999999999988899999999999999999999999987654433332211  1000                    00


Q ss_pred             CccccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCCCCC
Q 025467          156 PEGAASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLT  235 (252)
Q Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~t  235 (252)
                                                                             ....+.++.+||.+||..||++|||
T Consensus       292 -------------------------------------------------------~~~~s~~~~~li~~~L~~dP~~Rps  316 (478)
T PTZ00267        292 -------------------------------------------------------PCPVSSGMKALLDPLLSKNPALRPT  316 (478)
T ss_pred             -------------------------------------------------------CccCCHHHHHHHHHHhccChhhCcC
Confidence                                                                   0123457899999999999999999


Q ss_pred             HHHHHcCCCCCC
Q 025467          236 AREALRHPFFTR  247 (252)
Q Consensus       236 a~e~l~hpwf~~  247 (252)
                      +++++.|||++.
T Consensus       317 ~~~~l~~~~~~~  328 (478)
T PTZ00267        317 TQQLLHTEFLKY  328 (478)
T ss_pred             HHHHHhCHHHHH
Confidence            999999999864

>KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.95  E-value=2.7e-28  Score=202.73  Aligned_cols=145  Identities=31%  Similarity=0.543  Sum_probs=120.1

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCC--CccccCCC
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ--NYIVSTRH   78 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~--~~~~~t~~   78 (252)
                      |+.|+|+..+|||||||+||++-.                          +-+.+||+|||++-...+..  ...+|++.
T Consensus       130 AI~YCHqLHVVHRDLKPENVVFFE--------------------------KlGlVKLTDFGFSNkf~PG~kL~TsCGSLA  183 (864)
T KOG4717|consen  130 AISYCHQLHVVHRDLKPENVVFFE--------------------------KLGLVKLTDFGFSNKFQPGKKLTTSCGSLA  183 (864)
T ss_pred             HHHHHhhhhhhcccCCcceeEEee--------------------------ecCceEeeeccccccCCCcchhhcccchhh
Confidence            678999999999999999998843                          34567999999887655543  44699999


Q ss_pred             cccchhhhcCCCC-ccchhHhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHHHHHHhhcCCCCCCc
Q 025467           79 YRAPEVILGLGWT-YPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPE  157 (252)
Q Consensus        79 y~aPE~l~~~~~~-~~~Diws~G~~l~~l~~g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~  157 (252)
                      |-|||++.+..|. ++.||||+|||+|.+.+|++||+..++.+.+-.|+..--++|                        
T Consensus       184 YSAPEILLGDsYDAPAVDiWSLGVILyMLVCGq~PFqeANDSETLTmImDCKYtvP------------------------  239 (864)
T KOG4717|consen  184 YSAPEILLGDSYDAPAVDIWSLGVILYMLVCGQPPFQEANDSETLTMIMDCKYTVP------------------------  239 (864)
T ss_pred             ccCchhhhcCccCCcchhhhHHHHHHHHHHhCCCccccccchhhhhhhhcccccCc------------------------
Confidence            9999999999996 889999999999999999999998777666655543222222                        


Q ss_pred             cccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCCCCCHH
Q 025467          158 GAASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAR  237 (252)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~ta~  237 (252)
                                                                            ...+.+++|||.+||+.||.+|.|.+
T Consensus       240 ------------------------------------------------------shvS~eCrdLI~sMLvRdPkkRAslE  265 (864)
T KOG4717|consen  240 ------------------------------------------------------SHVSKECRDLIQSMLVRDPKKRASLE  265 (864)
T ss_pred             ------------------------------------------------------hhhhHHHHHHHHHHHhcCchhhccHH
Confidence                                                                  23567999999999999999999999


Q ss_pred             HHHcCCCCCCcc
Q 025467          238 EALRHPFFTRDH  249 (252)
Q Consensus       238 e~l~hpwf~~~~  249 (252)
                      +|..|+|++...
T Consensus       266 eI~s~~Wlq~~D  277 (864)
T KOG4717|consen  266 EIVSTSWLQAGD  277 (864)
T ss_pred             HHhccccccCCC
Confidence            999999998754

>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases

Probab=99.95  E-value=8.8e-28  Score=196.68  Aligned_cols=170  Identities=30%  Similarity=0.511  Sum_probs=113.4

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCC---CCccccCC
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD---QNYIVSTR   77 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~---~~~~~~t~   77 (252)
                      ||+|||++||+||||||+||+++.++                           .++|+|||.+......   .....++.
T Consensus       115 al~~lH~~~i~H~dl~p~nil~~~~~---------------------------~~kl~dfg~~~~~~~~~~~~~~~~~~~  167 (291)
T cd07844         115 GLAYCHQRRVLHRDLKPQNLLISERG---------------------------ELKLADFGLARAKSVPSKTYSNEVVTL  167 (291)
T ss_pred             HHHHHHhCCeecccCCHHHEEEcCCC---------------------------CEEECccccccccCCCCcccccccccc
Confidence            68999999999999999999995544                           4566666655432111   11124577


Q ss_pred             CcccchhhhcC-CCCccchhHhHHHHHHHHHhCCCCCCCCC-hHHHHHHHHHHhCCCchHHHHHhhHHHHHHhhcCCCCC
Q 025467           78 HYRAPEVILGL-GWTYPCDIWSVGCILVELCTGEALFQTHE-NLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDW  155 (252)
Q Consensus        78 ~y~aPE~l~~~-~~~~~~Diws~G~~l~~l~~g~~pf~~~~-~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~  155 (252)
                      .|+|||++.+. .++.++|+||+||++|+|++|..||.+.. ..+.+..+....+.+....+................. 
T Consensus       168 ~~~aPE~~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-  246 (291)
T cd07844         168 WYRPPDVLLGSTEYSTSLDMWGVGCIFYEMATGRPLFPGSTDVEDQLHKIFRVLGTPTEETWPGVSSNPEFKPYSFPFY-  246 (291)
T ss_pred             ccCCcHHhhcCcccCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHhcCCCChhhhhhhhhcccccccccccc-
Confidence            89999998764 57889999999999999999999997665 4455666666666655444332221100000000000 


Q ss_pred             CccccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccc--hhhHHHHHHHhccCCCCCC
Q 025467          156 PEGAASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHS--AGDLTHLLQGLLRYDPTDR  233 (252)
Q Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~ll~~~L~~dP~~R  233 (252)
                           ....                                          ........  ...+.+++.+||+.||++|
T Consensus       247 -----~~~~------------------------------------------~~~~~~~~~~~~~~~~li~~~L~~~p~~R  279 (291)
T cd07844         247 -----PPRP------------------------------------------LINHAPRLDRIPHGEELALKFLQYEPKKR  279 (291)
T ss_pred             -----CChh------------------------------------------HHHhCcCCCCchhHHHHHHHHhccCcccc
Confidence                 0000                                          00001112  2678999999999999999


Q ss_pred             CCHHHHHcCCCC
Q 025467          234 LTAREALRHPFF  245 (252)
Q Consensus       234 ~ta~e~l~hpwf  245 (252)
                      ||+.+++.||||
T Consensus       280 ps~~e~l~~~~f  291 (291)
T cd07844         280 ISAAEAMKHPYF  291 (291)
T ss_pred             cCHHHHhcCCCC
Confidence            999999999998

Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the

>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase

Probab=99.95  E-value=3.9e-28  Score=196.75  Aligned_cols=142  Identities=24%  Similarity=0.451  Sum_probs=102.6

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCC---CCccccCC
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD---QNYIVSTR   77 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~---~~~~~~t~   77 (252)
                      ||+|||+++|+|+||||+||+++.+                           ..++|+|||++......   .....|+.
T Consensus       123 ~l~~LH~~~ivh~dl~~~nili~~~---------------------------~~~~l~Dfg~~~~~~~~~~~~~~~~g~~  175 (272)
T cd06637         123 GLSHLHQHKVIHRDIKGQNVLLTEN---------------------------AEVKLVDFGVSAQLDRTVGRRNTFIGTP  175 (272)
T ss_pred             HHHHHHHCCCccCCCCHHHEEECCC---------------------------CCEEEccCCCceecccccccCCcccccc
Confidence            6899999999999999999999543                           44677777766533221   12246788


Q ss_pred             Ccccchhhhc-----CCCCccchhHhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHHHHHHhhcCC
Q 025467           78 HYRAPEVILG-----LGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGR  152 (252)
Q Consensus        78 ~y~aPE~l~~-----~~~~~~~Diws~G~~l~~l~~g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~  152 (252)
                      .|+|||++.+     ..++.++|+||+||++|++++|..||...........+..                      .. 
T Consensus       176 ~y~aPE~~~~~~~~~~~~~~~~Dv~slGv~l~el~~g~~p~~~~~~~~~~~~~~~----------------------~~-  232 (272)
T cd06637         176 YWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRALFLIPR----------------------NP-  232 (272)
T ss_pred             cccCHhHhccccCcCCCCCchhhHHHHHHHHHHHHhCCCCccccCHHHHHHHHhc----------------------CC-
Confidence            9999999863     3578899999999999999999999965432211111000                      00 


Q ss_pred             CCCCccccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCC
Q 025467          153 LDWPEGAASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTD  232 (252)
Q Consensus       153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~  232 (252)
                      ..                                                     .......+.++.+|+.+||..||.+
T Consensus       233 ~~-----------------------------------------------------~~~~~~~~~~~~~li~~~l~~~p~~  259 (272)
T cd06637         233 AP-----------------------------------------------------RLKSKKWSKKFQSFIESCLVKNHSQ  259 (272)
T ss_pred             CC-----------------------------------------------------CCCCCCcCHHHHHHHHHHcCCChhh
Confidence            00                                                     0001123458899999999999999


Q ss_pred             CCCHHHHHcCCCC
Q 025467          233 RLTAREALRHPFF  245 (252)
Q Consensus       233 R~ta~e~l~hpwf  245 (252)
                      |||+.++++||||
T Consensus       260 Rpt~~~il~~~~~  272 (272)
T cd06637         260 RPTTEQLMKHPFI  272 (272)
T ss_pred             CCCHHHHhhCCCC
Confidence            9999999999998

Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ

>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases

Probab=99.95  E-value=1.3e-27  Score=194.77  Aligned_cols=169  Identities=33%  Similarity=0.560  Sum_probs=119.1

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCC---CccccCC
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ---NYIVSTR   77 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~---~~~~~t~   77 (252)
                      ||+|||+++++||||+|+||+++.                           +..++++|||.+.......   ....++.
T Consensus       111 ~L~~lH~~~~~H~dl~p~nil~~~---------------------------~~~~~l~df~~~~~~~~~~~~~~~~~~~~  163 (283)
T cd07835         111 GIAYCHSHRVLHRDLKPQNLLIDR---------------------------EGALKLADFGLARAFGVPVRTYTHEVVTL  163 (283)
T ss_pred             HHHHHHHCCeeCCCCCHHHEEEcC---------------------------CCcEEEeecccccccCCCccccCcccccc
Confidence            689999999999999999999954                           4456777777765432211   1224577


Q ss_pred             CcccchhhhcC-CCCccchhHhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHHHHHHhhcCCCCCC
Q 025467           78 HYRAPEVILGL-GWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWP  156 (252)
Q Consensus        78 ~y~aPE~l~~~-~~~~~~Diws~G~~l~~l~~g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~  156 (252)
                      .|+|||++.+. .++.++|+||+||++|++++|..||.+.+.......+.+..+++....+...............  +.
T Consensus       164 ~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~  241 (283)
T cd07835         164 WYRAPEILLGSRQYSTPVDIWSIGCIFAEMVNRRPLFPGDSEIDQLFRIFRTLGTPDEDVWPGVTSLPDYKPTFPK--WA  241 (283)
T ss_pred             CCCCCceeecCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHHhhhhhhchhhhhhccc--cc
Confidence            89999988764 4688999999999999999999999888777777777777776665543332211100000000  00


Q ss_pred             ccccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCCCCCH
Q 025467          157 EGAASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTA  236 (252)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~ta  236 (252)
                      .                                               ..........+..+.+++.+||+.||.+|||+
T Consensus       242 ~-----------------------------------------------~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~  274 (283)
T cd07835         242 R-----------------------------------------------QDLSKVVPNLDEDGLDLLSKMLVYDPAKRISA  274 (283)
T ss_pred             c-----------------------------------------------cchhhhcCCCCHHHHHHHHHHhcCChhhCcCH
Confidence            0                                               00001113345689999999999999999999


Q ss_pred             HHHHcCCCC
Q 025467          237 REALRHPFF  245 (252)
Q Consensus       237 ~e~l~hpwf  245 (252)
                      +++++||||
T Consensus       275 ~~il~~~~~  283 (283)
T cd07835         275 KAALQHPYF  283 (283)
T ss_pred             HHHhcCCCC
Confidence            999999998

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc

>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7

Probab=99.95  E-value=6.9e-28  Score=197.94  Aligned_cols=173  Identities=31%  Similarity=0.521  Sum_probs=118.4

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCC---CccccCC
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ---NYIVSTR   77 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~---~~~~~t~   77 (252)
                      ||+|||++||+|+||+|+||+++.++                           .++|+|||.+.......   ....++.
T Consensus       114 al~~lH~~~i~H~dl~p~nill~~~~---------------------------~~~l~dfg~~~~~~~~~~~~~~~~~~~  166 (298)
T cd07841         114 GLEYLHSNWILHRDLKPNNLLIASDG---------------------------VLKLADFGLARSFGSPNRKMTHQVVTR  166 (298)
T ss_pred             HHHHHHhCCeeecCCChhhEEEcCCC---------------------------CEEEccceeeeeccCCCccccccccce
Confidence            68999999999999999999995544                           45666666554332211   1124567


Q ss_pred             CcccchhhhcC-CCCccchhHhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHHHHHHhhcCCCCCC
Q 025467           78 HYRAPEVILGL-GWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWP  156 (252)
Q Consensus        78 ~y~aPE~l~~~-~~~~~~Diws~G~~l~~l~~g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~  156 (252)
                      .|+|||.+.+. .++.++|+||+||+++++++|.++|.+.++.+.+..+....+.+....+...............    
T Consensus       167 ~y~aPE~~~~~~~~~~~~Dv~slG~il~e~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----  242 (298)
T cd07841         167 WYRAPELLFGARHYGVGVDMWSVGCIFAELLLRVPFLPGDSDIDQLGKIFEALGTPTEENWPGVTSLPDYVEFKPF----  242 (298)
T ss_pred             eeeCHHHHhCCCCCCcHHHHHHHHHHHHHHHcCCccccCCccHHHHHHHHHHcCCCchhhhhhccccccccccccc----
Confidence            89999998653 5788999999999999999999889887776666666666665544332221110000000000    


Q ss_pred             ccccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCCCCCH
Q 025467          157 EGAASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTA  236 (252)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~ta  236 (252)
                                     +.                               ..........+..+.+++.+||++||++|||+
T Consensus       243 ---------------~~-------------------------------~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~  276 (298)
T cd07841         243 ---------------PP-------------------------------TPLKQIFPAASDDALDLLQRLLTLNPNKRITA  276 (298)
T ss_pred             ---------------CC-------------------------------cchhhhcccccHHHHHHHHHHhcCCcccCcCH
Confidence                           00                               00001123346789999999999999999999


Q ss_pred             HHHHcCCCCCCccc
Q 025467          237 REALRHPFFTRDHL  250 (252)
Q Consensus       237 ~e~l~hpwf~~~~~  250 (252)
                      .++++||||.+.+.
T Consensus       277 ~e~l~~~~~~~~~~  290 (298)
T cd07841         277 RQALEHPYFSNDPA  290 (298)
T ss_pred             HHHhhCccccCCCC
Confidence            99999999998653

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is

>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase

Probab=99.95  E-value=5.9e-28  Score=196.90  Aligned_cols=148  Identities=26%  Similarity=0.455  Sum_probs=107.1

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCC---CCccccCC
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD---QNYIVSTR   77 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~---~~~~~~t~   77 (252)
                      ||+|||+.||+||||||+||+++.++                           .++++|||++......   .....++.
T Consensus       115 ~L~~LH~~~i~H~dlkp~nili~~~~---------------------------~~kl~dfg~~~~~~~~~~~~~~~~~~~  167 (282)
T cd06643         115 ALNYLHENKIIHRDLKAGNILFTLDG---------------------------DIKLADFGVSAKNTRTIQRRDSFIGTP  167 (282)
T ss_pred             HHHHHHHCCeeecCCCcccEEEccCC---------------------------CEEEccccccccccccccccccccccc
Confidence            68999999999999999999995544                           4566666655432211   12235788


Q ss_pred             Ccccchhhh-----cCCCCccchhHhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHHHHHHhhcCC
Q 025467           78 HYRAPEVIL-----GLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGR  152 (252)
Q Consensus        78 ~y~aPE~l~-----~~~~~~~~Diws~G~~l~~l~~g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~  152 (252)
                      .|+|||++.     +..++.++|+||+||++|++++|..||...+.......+.....+.                    
T Consensus       168 ~y~aPE~~~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~~~~~--------------------  227 (282)
T cd06643         168 YWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSEPPT--------------------  227 (282)
T ss_pred             cccCHhhccccCCCCCCCCccchhhhHHHHHHHHccCCCCccccCHHHHHHHHhhcCCCC--------------------
Confidence            999999984     3346789999999999999999999997665443333221110000                    


Q ss_pred             CCCCccccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCC
Q 025467          153 LDWPEGAASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTD  232 (252)
Q Consensus       153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~  232 (252)
                      .                                                       ......+.++.+|+.+||+.||.+
T Consensus       228 ~-------------------------------------------------------~~~~~~~~~~~~li~~~l~~~p~~  252 (282)
T cd06643         228 L-------------------------------------------------------AQPSRWSSEFKDFLKKCLEKNVDA  252 (282)
T ss_pred             C-------------------------------------------------------CCccccCHHHHHHHHHHccCChhh
Confidence            0                                                       000123458899999999999999


Q ss_pred             CCCHHHHHcCCCCCCccc
Q 025467          233 RLTAREALRHPFFTRDHL  250 (252)
Q Consensus       233 R~ta~e~l~hpwf~~~~~  250 (252)
                      |||+.++++||||+....
T Consensus       253 Rp~~~~il~~~~~~~~~~  270 (282)
T cd06643         253 RWTTTQLLQHPFVTVNSN  270 (282)
T ss_pred             CcCHHHHhcCCCEeccCC
Confidence            999999999999997654

Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.

>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins

Probab=99.95  E-value=9e-28  Score=198.23  Aligned_cols=184  Identities=24%  Similarity=0.428  Sum_probs=119.6

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCCCccccCCCcc
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYR   80 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~~~~~~t~~y~   80 (252)
                      ||+|||++||+|+||||+||++..++.+++.|||++............            +.. ..........+++.|+
T Consensus       127 al~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~------------~~~-~~~~~~~~~~~~~~y~  193 (311)
T cd07866         127 GINYLHENHILHRDIKAANILIDNQGILKIADFGLARPYDGPPPNPKG------------GGG-GGTRKYTNLVVTRWYR  193 (311)
T ss_pred             HHHHHHhCCeecCCCCHHHEEECCCCCEEECcCccchhccCCCccccc------------CCc-ccccccccceeccCcC
Confidence            689999999999999999999977666666666655432211100000            000 0000112235678899


Q ss_pred             cchhhhcC-CCCccchhHhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHHHHHHhhcCCCCCCccc
Q 025467           81 APEVILGL-GWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGA  159 (252)
Q Consensus        81 aPE~l~~~-~~~~~~Diws~G~~l~~l~~g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~  159 (252)
                      |||.+.+. .++.++|+||+||++|+|++|.+||.+.+.......+....+.+++..+..+...............    
T Consensus       194 aPE~~~~~~~~~~~~Dv~slG~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----  269 (311)
T cd07866         194 PPELLLGERRYTTAVDIWGIGCVFAEMFTRRPILQGKSDIDQLHLIFKLCGTPTEETWPGWRSLPGCEGVHSFTNY----  269 (311)
T ss_pred             ChHHhhCCCccCchhHhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhchhhhhcccccccccCCCC----
Confidence            99998764 4788999999999999999999999988887777777777776654332222110000000000000    


Q ss_pred             cchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCCCCCHHHH
Q 025467          160 ASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREA  239 (252)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~ta~e~  239 (252)
                                                                  +.............+.+++.+||+.||++|||+.++
T Consensus       270 --------------------------------------------~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~t~~el  305 (311)
T cd07866         270 --------------------------------------------PRTLEERFGKLGPEGLDLLSKLLSLDPYKRLTASDA  305 (311)
T ss_pred             --------------------------------------------CccHHHHcccCChhHHHHHHHHcccCcccCcCHHHH
Confidence                                                        000001112344688999999999999999999999


Q ss_pred             HcCCCC
Q 025467          240 LRHPFF  245 (252)
Q Consensus       240 l~hpwf  245 (252)
                      +.||||
T Consensus       306 l~~~~f  311 (311)
T cd07866         306 LEHPYF  311 (311)
T ss_pred             hcCCCC
Confidence            999998

Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic

>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases

Probab=99.95  E-value=1e-27  Score=195.80  Aligned_cols=172  Identities=34%  Similarity=0.640  Sum_probs=122.9

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCC----CccccC
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ----NYIVST   76 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~----~~~~~t   76 (252)
                      ||+|||++|++|+||+|+||+++.                           .+.++|+|||.+.......    ....++
T Consensus       112 ~l~~LH~~~i~H~dl~~~ni~~~~---------------------------~~~~kl~d~g~~~~~~~~~~~~~~~~~~~  164 (288)
T cd07833         112 AIAYCHSHNIIHRDIKPENILVSE---------------------------SGVLKLCDFGFARALRARPASPLTDYVAT  164 (288)
T ss_pred             HHHHHHHCCeecCCCCHHHeEECC---------------------------CCCEEEEeeecccccCCCccccccCcccc
Confidence            689999999999999999999944                           4457777777765433322    123567


Q ss_pred             CCcccchhhhcC-CCCccchhHhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHHHHHHhhcCCCCC
Q 025467           77 RHYRAPEVILGL-GWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDW  155 (252)
Q Consensus        77 ~~y~aPE~l~~~-~~~~~~Diws~G~~l~~l~~g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~  155 (252)
                      ..|+|||++.+. .++.++|+||+|+++|++++|..||.+....+.+..+....+.++......+........    ...
T Consensus       165 ~~~~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~  240 (288)
T cd07833         165 RWYRAPELLVGDTNYGKPVDVWAIGCIMAELLDGEPLFPGDSDIDQLYLIQKCLGPLPPSHQELFSSNPRFAG----VAF  240 (288)
T ss_pred             cCCcCCchhcCCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHhhhcccCccccc----ccc
Confidence            889999999887 788999999999999999999999988877777777778788777644333221000000    000


Q ss_pred             CccccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCCCCC
Q 025467          156 PEGAASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLT  235 (252)
Q Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~t  235 (252)
                      +.. ..                                         ............+.++.+|+++||..+|++|||
T Consensus       241 ~~~-~~-----------------------------------------~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps  278 (288)
T cd07833         241 PEP-SQ-----------------------------------------PESLERRYPGKVSSPALDFLKACLRMDPKERLT  278 (288)
T ss_pred             CCC-CC-----------------------------------------cHHHHHhcCCccchHHHHHHHHHhccCchhccc
Confidence            000 00                                         000001112334778999999999999999999


Q ss_pred             HHHHHcCCCC
Q 025467          236 AREALRHPFF  245 (252)
Q Consensus       236 a~e~l~hpwf  245 (252)
                      ++++++||||
T Consensus       279 ~~~il~~~~f  288 (288)
T cd07833         279 CDELLQHPYF  288 (288)
T ss_pred             HHHHhcCCCC
Confidence            9999999998

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning

>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4

Probab=99.95  E-value=9.8e-28  Score=192.79  Aligned_cols=141  Identities=26%  Similarity=0.497  Sum_probs=105.7

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCC---CCccccCC
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD---QNYIVSTR   77 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~---~~~~~~t~   77 (252)
                      ||+|||++||+||||||+||+++.+                           ..++|+|||.+......   .....+++
T Consensus       114 ~l~~lH~~~i~H~di~p~nil~~~~---------------------------~~~~l~df~~~~~~~~~~~~~~~~~~~~  166 (257)
T cd08223         114 ALQYLHEKHILHRDLKTQNVFLTRT---------------------------NIIKVGDLGIARVLENQCDMASTLIGTP  166 (257)
T ss_pred             HHHHHHhCCeeccCCCchhEEEecC---------------------------CcEEEecccceEEecccCCccccccCCc
Confidence            5789999999999999999999544                           44666677666433221   12235788


Q ss_pred             CcccchhhhcCCCCccchhHhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHHHHHHhhcCCCCCCc
Q 025467           78 HYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPE  157 (252)
Q Consensus        78 ~y~aPE~l~~~~~~~~~Diws~G~~l~~l~~g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~  157 (252)
                      .|+|||++.+..++.++|+||+||+++++++|..||...+.......+..  +.++                        
T Consensus       167 ~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~~~~~~~~--~~~~------------------------  220 (257)
T cd08223         167 YYMSPELFSNKPYNYKSDVWALGCCVYEMATLKHAFNAKDMNSLVYRIIE--GKLP------------------------  220 (257)
T ss_pred             CccChhHhcCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHh--cCCC------------------------
Confidence            89999999988889999999999999999999999976553332221111  1110                        


Q ss_pred             cccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCCCCCHH
Q 025467          158 GAASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAR  237 (252)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~ta~  237 (252)
                                                                         ......+.++.+++.+||+.||++|||+.
T Consensus       221 ---------------------------------------------------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~  249 (257)
T cd08223         221 ---------------------------------------------------PMPKDYSPELGELIATMLSKRPEKRPSVK  249 (257)
T ss_pred             ---------------------------------------------------CCccccCHHHHHHHHHHhccCcccCCCHH
Confidence                                                               00022346889999999999999999999


Q ss_pred             HHHcCCCC
Q 025467          238 EALRHPFF  245 (252)
Q Consensus       238 e~l~hpwf  245 (252)
                      ++++||||
T Consensus       250 ~~l~~~~~  257 (257)
T cd08223         250 SILRQPYI  257 (257)
T ss_pred             HHhcCCCC
Confidence            99999997

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.

>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7

Probab=99.95  E-value=4.6e-28  Score=197.18  Aligned_cols=89  Identities=28%  Similarity=0.542  Sum_probs=72.8

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCC--CccccCCC
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ--NYIVSTRH   78 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~--~~~~~t~~   78 (252)
                      ||+|||+.||+||||||+||+++.                           ...++|+|||.+.......  ....|+..
T Consensus       107 al~~lH~~~ivH~dikp~Nili~~---------------------------~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~  159 (277)
T cd05607         107 GILHLHSMDIVYRDMKPENVLLDD---------------------------QGNCRLSDLGLAVELKDGKTITQRAGTNG  159 (277)
T ss_pred             HHHHHHHCCEEEccCChHhEEEcC---------------------------CCCEEEeeceeeeecCCCceeeccCCCCC
Confidence            689999999999999999999954                           3456777777665433221  12367889


Q ss_pred             cccchhhhcCCCCccchhHhHHHHHHHHHhCCCCCCCC
Q 025467           79 YRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTH  116 (252)
Q Consensus        79 y~aPE~l~~~~~~~~~Diws~G~~l~~l~~g~~pf~~~  116 (252)
                      |+|||++.+..++.++|+||+||++|++++|..||...
T Consensus       160 y~aPE~~~~~~~~~~~DvwslGv~l~el~~g~~p~~~~  197 (277)
T cd05607         160 YMAPEILKEEPYSYPVDWFAMGCSIYEMVAGRTPFKDH  197 (277)
T ss_pred             ccCHHHHccCCCCCchhHHHHHHHHHHHHhCCCCCCCC
Confidence            99999998888999999999999999999999999754

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr

>PTZ00024 cyclin-dependent protein kinase; Provisional

Probab=99.95  E-value=9.2e-28  Score=200.52  Aligned_cols=190  Identities=28%  Similarity=0.468  Sum_probs=123.6

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCCCccccCCCcc
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYR   80 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~~~~~~t~~y~   80 (252)
                      ||+|||+.||+|+||+|+||++..++.+++.|||.+.............        .+....  .........++..|+
T Consensus       131 aL~~LH~~~i~H~dl~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~--------~~~~~~--~~~~~~~~~~~~~y~  200 (335)
T PTZ00024        131 GLNVLHKWYFMHRDLSPANIFINSKGICKIADFGLARRYGYPPYSDTLS--------KDETMQ--RREEMTSKVVTLWYR  200 (335)
T ss_pred             HHHHHHhCCeecccccHHHeEECCCCCEEECCccceeeccccccccccc--------cccccc--ccccccccccccCCC
Confidence            6899999999999999999999877777777777664432111000000        000000  001111224677899


Q ss_pred             cchhhhcC-CCCccchhHhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHHHHHHhhcCCCCCCccc
Q 025467           81 APEVILGL-GWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGA  159 (252)
Q Consensus        81 aPE~l~~~-~~~~~~Diws~G~~l~~l~~g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~  159 (252)
                      |||.+.+. .++.++|+||+||+++++++|..||.+.++.+.+..+....+.++...+.......        ...+...
T Consensus       201 aPE~~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~--------~~~~~~~  272 (335)
T PTZ00024        201 APELLMGAEKYHFAVDMWSVGCIFAELLTGKPLFPGENEIDQLGRIFELLGTPNEDNWPQAKKLP--------LYTEFTP  272 (335)
T ss_pred             CChhcccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCchhhCcchhhcc--------cccccCc
Confidence            99998764 46889999999999999999999999888877777777777765543211110000        0000000


Q ss_pred             cchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCCCCCHHHH
Q 025467          160 ASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREA  239 (252)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~ta~e~  239 (252)
                      ..                                          +..........+..+.+++.+||+.+|++|||++++
T Consensus       273 ~~------------------------------------------~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~  310 (335)
T PTZ00024        273 RK------------------------------------------PKDLKTIFPNASDDAIDLLQSLLKLNPLERISAKEA  310 (335)
T ss_pred             CC------------------------------------------cccHHHhCcCCChHHHHHHHHHcCCCchhccCHHHH
Confidence            00                                          000001112345689999999999999999999999


Q ss_pred             HcCCCCCCccc
Q 025467          240 LRHPFFTRDHL  250 (252)
Q Consensus       240 l~hpwf~~~~~  250 (252)
                      |.||||...+.
T Consensus       311 l~~~~~~~~~~  321 (335)
T PTZ00024        311 LKHEYFKSDPL  321 (335)
T ss_pred             hcCcccCCCCC
Confidence            99999998764

>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases

Probab=99.95  E-value=2.8e-27  Score=192.60  Aligned_cols=169  Identities=31%  Similarity=0.556  Sum_probs=120.7

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCC---CccccCC
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ---NYIVSTR   77 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~---~~~~~t~   77 (252)
                      ||+|||++||+||||+|+||+++.                           ++.++|+|||.+.......   ....++.
T Consensus       110 ~l~~LH~~~i~H~~l~~~ni~~~~---------------------------~~~~~l~d~g~~~~~~~~~~~~~~~~~~~  162 (282)
T cd07829         110 GLAYCHSHRILHRDLKPQNILINR---------------------------DGVLKLADFGLARAFGIPLRTYTHEVVTL  162 (282)
T ss_pred             HHHHHHHCCcccCCCChheEEEcC---------------------------CCCEEEecCCcccccCCCccccCccccCc
Confidence            689999999999999999999954                           4456677777665432221   1224567


Q ss_pred             CcccchhhhcC-CCCccchhHhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHHHHHHhhcCCCCCC
Q 025467           78 HYRAPEVILGL-GWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWP  156 (252)
Q Consensus        78 ~y~aPE~l~~~-~~~~~~Diws~G~~l~~l~~g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~  156 (252)
                      .|+|||.+... .++.++|+||+||+++++++|..||.+.+....+..+.+..+...+..+..+....  ........+.
T Consensus       163 ~~~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~  240 (282)
T cd07829         163 WYRAPEILLGSKHYSTAVDIWSVGCIFAEMITGKPLFPGDSEIDQLFKIFQILGTPTEESWPGVTKLP--DYKPTFPKFP  240 (282)
T ss_pred             CcCChHHhcCCcCCCccccHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHHHhCCCcHHHHHhhcccc--cccccccccC
Confidence            79999998776 67899999999999999999999999888888888888888776665543332111  0000000000


Q ss_pred             ccccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCCCCCH
Q 025467          157 EGAASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTA  236 (252)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~ta  236 (252)
                      .                                               ..........+..+.+++++||+.||++|||+
T Consensus       241 ~-----------------------------------------------~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~  273 (282)
T cd07829         241 P-----------------------------------------------KDLEKVLPRLDPEGIDLLSKMLQYNPAKRISA  273 (282)
T ss_pred             c-----------------------------------------------cchHHhcccccHHHHHHHHHhhccCcccCCCH
Confidence            0                                               00001112336689999999999999999999


Q ss_pred             HHHHcCCCC
Q 025467          237 REALRHPFF  245 (252)
Q Consensus       237 ~e~l~hpwf  245 (252)
                      ++++.||||
T Consensus       274 ~~~l~~p~~  282 (282)
T cd07829         274 KEALKHPYF  282 (282)
T ss_pred             HHHhhCcCC
Confidence            999999998

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the

>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5

Probab=99.95  E-value=6.1e-28  Score=197.22  Aligned_cols=149  Identities=28%  Similarity=0.411  Sum_probs=111.3

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCC--CccccCCC
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ--NYIVSTRH   78 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~--~~~~~t~~   78 (252)
                      ||.|||++||+||||||+||+++.                           ...++|+|||.+.......  ....|+..
T Consensus       114 ~l~~lH~~~iiH~dikp~Nili~~---------------------------~~~~kl~Dfg~~~~~~~~~~~~~~~g~~~  166 (285)
T cd05632         114 GLEDLHRENTVYRDLKPENILLDD---------------------------YGHIRISDLGLAVKIPEGESIRGRVGTVG  166 (285)
T ss_pred             HHHHHHhCCeeecCCCHHHEEECC---------------------------CCCEEEecCCcceecCCCCcccCCCCCcC
Confidence            689999999999999999999943                           4457788888775432221  22468899


Q ss_pred             cccchhhhcCCCCccchhHhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHHHHHHhhcCCCCCCcc
Q 025467           79 YRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEG  158 (252)
Q Consensus        79 y~aPE~l~~~~~~~~~Diws~G~~l~~l~~g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~  158 (252)
                      |+|||++.+..++.++|+||+||++|++++|..||.+.........+.....                   .+...    
T Consensus       167 ~~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~P~~~~~~~~~~~~~~~~~~-------------------~~~~~----  223 (285)
T cd05632         167 YMAPEVLNNQRYTLSPDYWGLGCLIYEMIEGQSPFRGRKEKVKREEVDRRVL-------------------ETEEV----  223 (285)
T ss_pred             ccChHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhhh-------------------ccccc----
Confidence            9999999888899999999999999999999999986554332222211110                   00000    


Q ss_pred             ccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCCCCC---
Q 025467          159 AASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLT---  235 (252)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~t---  235 (252)
                                                                         .....+..+.+|+.+||+.||++|||   
T Consensus       224 ---------------------------------------------------~~~~~~~~~~~li~~~l~~~P~~R~~~~~  252 (285)
T cd05632         224 ---------------------------------------------------YSAKFSEEAKSICKMLLTKDPKQRLGCQE  252 (285)
T ss_pred             ---------------------------------------------------cCccCCHHHHHHHHHHccCCHhHcCCCcc
Confidence                                                               01223457899999999999999999   


Q ss_pred             --HHHHHcCCCCCCccc
Q 025467          236 --AREALRHPFFTRDHL  250 (252)
Q Consensus       236 --a~e~l~hpwf~~~~~  250 (252)
                        +++++.||||++...
T Consensus       253 ~~~~~l~~~~~~~~~~~  269 (285)
T cd05632         253 EGAGEVKRHPFFRNMNF  269 (285)
T ss_pred             cChHHHHcChhhhcCCH
Confidence              899999999988643

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with

>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases

Probab=99.95  E-value=1.8e-27  Score=193.81  Aligned_cols=170  Identities=35%  Similarity=0.624  Sum_probs=121.4

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCC---CccccCC
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ---NYIVSTR   77 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~---~~~~~t~   77 (252)
                      ||+|||++||+|+||+|+||+++.                           +..++++|||.+.......   ....++.
T Consensus       110 ~l~~LH~~~i~H~dl~p~nili~~---------------------------~~~~~l~df~~~~~~~~~~~~~~~~~~~~  162 (283)
T cd05118         110 GLAFCHSHGILHRDLKPENLLINT---------------------------EGVLKLADFGLARSFGSPVRPYTHYVVTR  162 (283)
T ss_pred             HHHHHHHCCeeecCcCHHHEEECC---------------------------CCcEEEeeeeeeEecCCCcccccCccCcc
Confidence            589999999999999999999943                           4457777777765443322   1235677


Q ss_pred             CcccchhhhcC-CCCccchhHhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHHHHHHhhcCCCCCC
Q 025467           78 HYRAPEVILGL-GWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWP  156 (252)
Q Consensus        78 ~y~aPE~l~~~-~~~~~~Diws~G~~l~~l~~g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~  156 (252)
                      .|+|||.+.+. .++.++|+||+||++|++++|+.||.+.+..+.+..+....+.+....+...........    ...+
T Consensus       163 ~~~~PE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~  238 (283)
T cd05118         163 WYRAPELLLGDKGYSTPVDIWSVGCIFAELLSRRPLFPGKSEIDQLFKIFRTLGTPDPEVWPKFTSLARNYK----FSFP  238 (283)
T ss_pred             cccCcHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCchHhcccchhhhhhhh----hhhc
Confidence            89999999876 678999999999999999999999988888777777777776654443333222111110    0000


Q ss_pred             ccccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCCCCCH
Q 025467          157 EGAASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTA  236 (252)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~ta  236 (252)
                      ...                                            ...........+..+.+++.+||+.||.+||++
T Consensus       239 ~~~--------------------------------------------~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~  274 (283)
T cd05118         239 KKA--------------------------------------------GMPLPKLFPNASPQALDLLSQMLHYDPHKRITA  274 (283)
T ss_pred             ccc--------------------------------------------ccCHHHhhhhhCHHHHHHHHHHhccCcccCcCH
Confidence            000                                            000001113356789999999999999999999


Q ss_pred             HHHHcCCCC
Q 025467          237 REALRHPFF  245 (252)
Q Consensus       237 ~e~l~hpwf  245 (252)
                      ++++.||||
T Consensus       275 ~~ll~~~~~  283 (283)
T cd05118         275 EQALAHPYF  283 (283)
T ss_pred             HHHhhCCCC
Confidence            999999997

Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They

>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=99.95  E-value=8.8e-28  Score=193.69  Aligned_cols=142  Identities=27%  Similarity=0.423  Sum_probs=104.6

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCC------Cccc
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ------NYIV   74 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~------~~~~   74 (252)
                      ||+|||+.||+||||+|+||+++.+                           +.++|+|||.+.......      ....
T Consensus       116 ~l~~lH~~~i~H~dl~p~nilv~~~---------------------------~~~~l~dfg~~~~~~~~~~~~~~~~~~~  168 (263)
T cd06625         116 GVEYLHSNMIVHRDIKGANILRDSA---------------------------GNVKLGDFGASKRLQTICSSGTGMKSVT  168 (263)
T ss_pred             HHHHHHhCCeecCCCCHHHEEEcCC---------------------------CCEEEeecccceeccccccccccccCCC
Confidence            6899999999999999999999544                           346666776654322110      1235


Q ss_pred             cCCCcccchhhhcCCCCccchhHhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHHHHHHhhcCCCC
Q 025467           75 STRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLD  154 (252)
Q Consensus        75 ~t~~y~aPE~l~~~~~~~~~Diws~G~~l~~l~~g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~  154 (252)
                      ++..|+|||.+.+..++.++|+||+||++|++++|..||...+.......+....                     ... 
T Consensus       169 ~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~---------------------~~~-  226 (263)
T cd06625         169 GTPYWMSPEVISGEGYGRKADVWSVGCTVVEMLTEKPPWAEFEAMAAIFKIATQP---------------------TNP-  226 (263)
T ss_pred             cCccccCcceeccCCCCchhhhHHHHHHHHHHHhCCCCccccchHHHHHHHhccC---------------------CCC-
Confidence            6788999999998888999999999999999999999997543322211110000                     000 


Q ss_pred             CCccccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCCCC
Q 025467          155 WPEGAASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRL  234 (252)
Q Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~  234 (252)
                                                                            ......+..+.+++.+||..+|.+||
T Consensus       227 ------------------------------------------------------~~~~~~~~~~~~li~~~l~~~p~~Rp  252 (263)
T cd06625         227 ------------------------------------------------------QLPSHVSPDARNFLRRTFVENAKKRP  252 (263)
T ss_pred             ------------------------------------------------------CCCccCCHHHHHHHHHHhhcCcccCC
Confidence                                                                  00123456889999999999999999


Q ss_pred             CHHHHHcCCCC
Q 025467          235 TAREALRHPFF  245 (252)
Q Consensus       235 ta~e~l~hpwf  245 (252)
                      |+.++++||||
T Consensus       253 t~~~ll~~~~~  263 (263)
T cd06625         253 SAEELLRHFFV  263 (263)
T ss_pred             CHHHHhhCCCC
Confidence            99999999998

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t

>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4

Probab=99.95  E-value=6.3e-28  Score=197.24  Aligned_cols=150  Identities=26%  Similarity=0.401  Sum_probs=107.5

Q ss_pred             Chhhhhc-cCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCC--CCccccCC
Q 025467            1 MFAVMHD-LCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD--QNYIVSTR   77 (252)
Q Consensus         1 aL~~lH~-~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~--~~~~~~t~   77 (252)
                      ||+|||+ .+|+||||||+||+++.                           ...++|+|||++......  .....++.
T Consensus       119 ~l~~lh~~~~i~H~dlkp~Nil~~~---------------------------~~~~kl~dfg~~~~~~~~~~~~~~~~~~  171 (288)
T cd06616         119 ALNYLKEELKIIHRDVKPSNILLDR---------------------------NGNIKLCDFGISGQLVDSIAKTRDAGCR  171 (288)
T ss_pred             HHHHHhhcCCeeccCCCHHHEEEcc---------------------------CCcEEEeecchhHHhccCCccccccCcc
Confidence            6899997 59999999999999954                           345677777776543221  12235788


Q ss_pred             CcccchhhhcC---CCCccchhHhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhC-CCchHHHHHhhHHHHHHhhcCCC
Q 025467           78 HYRAPEVILGL---GWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLG-PLPQHMLKRVDRHAEKYVRRGRL  153 (252)
Q Consensus        78 ~y~aPE~l~~~---~~~~~~Diws~G~~l~~l~~g~~pf~~~~~~~~~~~~~~~~g-~~p~~~~~~~~~~~~~~~~~~~~  153 (252)
                      .|+|||++.+.   .++.++|+||+||++|++++|..||.....  ....+..... ..|.                   
T Consensus       172 ~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~--~~~~~~~~~~~~~~~-------------------  230 (288)
T cd06616         172 PYMAPERIDPSARDGYDVRSDVWSLGITLYEVATGKFPYPKWNS--VFDQLTQVVKGDPPI-------------------  230 (288)
T ss_pred             CccCHHHhccccccCCcchhhhhHHHHHHHHHHhCCCCchhcch--HHHHHhhhcCCCCCc-------------------
Confidence            89999999876   588999999999999999999999975431  1122111111 1000                   


Q ss_pred             CCCccccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCCC
Q 025467          154 DWPEGAASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDR  233 (252)
Q Consensus       154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R  233 (252)
                       .+                                                   .......+.++.+|+.+||+.||++|
T Consensus       231 -~~---------------------------------------------------~~~~~~~~~~l~~li~~~l~~~p~~R  258 (288)
T cd06616         231 -LS---------------------------------------------------NSEEREFSPSFVNFINLCLIKDESKR  258 (288)
T ss_pred             -CC---------------------------------------------------CcCCCccCHHHHHHHHHHccCChhhC
Confidence             00                                                   00012345689999999999999999


Q ss_pred             CCHHHHHcCCCCCCccc
Q 025467          234 LTAREALRHPFFTRDHL  250 (252)
Q Consensus       234 ~ta~e~l~hpwf~~~~~  250 (252)
                      ||++++++||||.+...
T Consensus       259 pt~~~i~~~~~~~~~~~  275 (288)
T cd06616         259 PKYKELLEHPFIKDYEE  275 (288)
T ss_pred             cCHHHHhcChhhhchhh
Confidence            99999999999987543

Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates

>KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.95  E-value=4.8e-28  Score=191.17  Aligned_cols=143  Identities=31%  Similarity=0.513  Sum_probs=118.1

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCC---CCCccccCC
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERP---DQNYIVSTR   77 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~---~~~~~~~t~   77 (252)
                      ||.|||+++||+||+|.+|+|+                           +..+++||+|||+++....   .....+||+
T Consensus       280 AL~YLHs~~ivYRDlKLENLlL---------------------------DkDGHIKitDFGLCKE~I~~g~t~kTFCGTP  332 (516)
T KOG0690|consen  280 ALGYLHSRNIVYRDLKLENLLL---------------------------DKDGHIKITDFGLCKEEIKYGDTTKTFCGTP  332 (516)
T ss_pred             HhhhhhhCCeeeeechhhhhee---------------------------ccCCceEeeecccchhcccccceeccccCCh
Confidence            7999999999999999999999                           6677888888888875433   233469999


Q ss_pred             CcccchhhhcCCCCccchhHhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHHHHHHhhcCCCCCCc
Q 025467           78 HYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPE  157 (252)
Q Consensus        78 ~y~aPE~l~~~~~~~~~Diws~G~~l~~l~~g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~  157 (252)
                      .|.|||++....|+.+.|.|.+||++|+|++|+.||...++...+..|...-                       +.+| 
T Consensus       333 EYLAPEVleDnDYgraVDWWG~GVVMYEMmCGRLPFyn~dh~kLFeLIl~ed-----------------------~kFP-  388 (516)
T KOG0690|consen  333 EYLAPEVLEDNDYGRAVDWWGVGVVMYEMMCGRLPFYNKDHEKLFELILMED-----------------------LKFP-  388 (516)
T ss_pred             hhcCchhhccccccceeehhhhhHHHHHHHhccCcccccchhHHHHHHHhhh-----------------------ccCC-
Confidence            9999999999999999999999999999999999998877655544332211                       1122 


Q ss_pred             cccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCCCCC--
Q 025467          158 GAASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLT--  235 (252)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~t--  235 (252)
                                                                            ...+++++.||..+|..||.+|..  
T Consensus       389 ------------------------------------------------------r~ls~eAktLLsGLL~kdP~kRLGgG  414 (516)
T KOG0690|consen  389 ------------------------------------------------------RTLSPEAKTLLSGLLKKDPKKRLGGG  414 (516)
T ss_pred             ------------------------------------------------------ccCCHHHHHHHHHHhhcChHhhcCCC
Confidence                                                                  345679999999999999999986  


Q ss_pred             ---HHHHHcCCCCCCc
Q 025467          236 ---AREALRHPFFTRD  248 (252)
Q Consensus       236 ---a~e~l~hpwf~~~  248 (252)
                         |.|+.+|+||...
T Consensus       415 pdDakEi~~h~FF~~v  430 (516)
T KOG0690|consen  415 PDDAKEIMRHRFFASV  430 (516)
T ss_pred             chhHHHHHhhhhhccC
Confidence               9999999999875

>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5

Probab=99.95  E-value=7.3e-28  Score=197.45  Aligned_cols=147  Identities=30%  Similarity=0.512  Sum_probs=108.0

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCC---CCccccCC
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD---QNYIVSTR   77 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~---~~~~~~t~   77 (252)
                      ||+|||++||+||||||+||+++.++                           .++|+|||.+......   .....++.
T Consensus       130 ~l~~LH~~~ivH~dlkp~Nill~~~~---------------------------~~kL~dfg~~~~~~~~~~~~~~~~~~~  182 (292)
T cd06658         130 ALSYLHNQGVIHRDIKSDSILLTSDG---------------------------RIKLSDFGFCAQVSKEVPKRKSLVGTP  182 (292)
T ss_pred             HHHHHHHCCEeecCCCHHHEEEcCCC---------------------------CEEEccCcchhhcccccccCceeecCc
Confidence            58999999999999999999995444                           4666666665432111   11235788


Q ss_pred             CcccchhhhcCCCCccchhHhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHHHHHHhhcCCCCCCc
Q 025467           78 HYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPE  157 (252)
Q Consensus        78 ~y~aPE~l~~~~~~~~~Diws~G~~l~~l~~g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~  157 (252)
                      .|+|||.+.+..++.++|+||+||+++++++|..||...+....+..+.......                    .    
T Consensus       183 ~y~aPE~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~~~~~--------------------~----  238 (292)
T cd06658         183 YWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGEPPYFNEPPLQAMRRIRDNLPPR--------------------V----  238 (292)
T ss_pred             cccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCc--------------------c----
Confidence            9999999988888999999999999999999999997655433322211110000                    0    


Q ss_pred             cccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCCCCCHH
Q 025467          158 GAASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAR  237 (252)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~ta~  237 (252)
                                                                         ......+..+.+++.+||..||.+|||++
T Consensus       239 ---------------------------------------------------~~~~~~~~~~~~li~~~l~~~P~~Rpt~~  267 (292)
T cd06658         239 ---------------------------------------------------KDSHKVSSVLRGFLDLMLVREPSQRATAQ  267 (292)
T ss_pred             ---------------------------------------------------ccccccCHHHHHHHHHHccCChhHCcCHH
Confidence                                                               00012345788999999999999999999


Q ss_pred             HHHcCCCCCCcc
Q 025467          238 EALRHPFFTRDH  249 (252)
Q Consensus       238 e~l~hpwf~~~~  249 (252)
                      ++++||||....
T Consensus       268 ~il~~~~~~~~~  279 (292)
T cd06658         268 ELLQHPFLKLAG  279 (292)
T ss_pred             HHhhChhhhccC
Confidence            999999998654

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express

>PLN00009 cyclin-dependent kinase A; Provisional

Probab=99.95  E-value=2.1e-27  Score=194.78  Aligned_cols=174  Identities=33%  Similarity=0.520  Sum_probs=121.2

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCC---CccccCC
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ---NYIVSTR   77 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~---~~~~~t~   77 (252)
                      ||+|||++||+|+||+|+||+++..                          ...++++|||.+.......   ....++.
T Consensus       114 aL~~LH~~~i~H~dl~p~nill~~~--------------------------~~~~kl~dfg~~~~~~~~~~~~~~~~~~~  167 (294)
T PLN00009        114 GIAYCHSHRVLHRDLKPQNLLIDRR--------------------------TNALKLADFGLARAFGIPVRTFTHEVVTL  167 (294)
T ss_pred             HHHHHHhCCeeCCCCCcceEEEECC--------------------------CCEEEEcccccccccCCCccccccCceee
Confidence            6899999999999999999999532                          2346777777765432211   2235678


Q ss_pred             CcccchhhhcC-CCCccchhHhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHHHHHHhhcCCCCCC
Q 025467           78 HYRAPEVILGL-GWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWP  156 (252)
Q Consensus        78 ~y~aPE~l~~~-~~~~~~Diws~G~~l~~l~~g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~  156 (252)
                      .|+|||++.+. .++.++|+||+||++|++++|..||...+..+.+..+....+.+.+..+..+.....+....  ..++
T Consensus       168 ~y~~PE~~~~~~~~~~~~Dv~slG~i~~~l~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~  245 (294)
T PLN00009        168 WYRAPEILLGSRHYSTPVDIWSVGCIFAEMVNQKPLFPGDSEIDELFKIFRILGTPNEETWPGVTSLPDYKSAF--PKWP  245 (294)
T ss_pred             cccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhccccccchhhhhhc--ccCC
Confidence            89999998764 57889999999999999999999998877777777777777766554432211100000000  0000


Q ss_pred             ccccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCCCCCH
Q 025467          157 EGAASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTA  236 (252)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~ta  236 (252)
                                                                     +..........+..+.+++.+||+.+|++|||+
T Consensus       246 -----------------------------------------------~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~  278 (294)
T PLN00009        246 -----------------------------------------------PKDLATVVPTLEPAGVDLLSKMLRLDPSKRITA  278 (294)
T ss_pred             -----------------------------------------------CCCHHHhCcCCChHHHHHHHHHccCChhhCcCH
Confidence                                                           000001123456789999999999999999999


Q ss_pred             HHHHcCCCCCCcc
Q 025467          237 REALRHPFFTRDH  249 (252)
Q Consensus       237 ~e~l~hpwf~~~~  249 (252)
                      .++++||||....
T Consensus       279 ~~~l~~~~~~~~~  291 (294)
T PLN00009        279 RAALEHEYFKDLG  291 (294)
T ss_pred             HHHhcCchHhHHh
Confidence            9999999998653

>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15

Probab=99.95  E-value=3.1e-27  Score=197.51  Aligned_cols=175  Identities=34%  Similarity=0.549  Sum_probs=124.0

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCC--------CCc
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD--------QNY   72 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~--------~~~   72 (252)
                      ||+|||+.||+||||||+||+++.++                           .++|+|||.+......        ...
T Consensus       119 ~L~~LH~~~i~H~dl~p~nill~~~~---------------------------~~kl~d~g~~~~~~~~~~~~~~~~~~~  171 (337)
T cd07852         119 ALKYIHSGNVIHRDLKPSNILLNSDC---------------------------RVKLADFGLARSLSELEENPENPVLTD  171 (337)
T ss_pred             HHHHHHHCCeecCCCCHHHEEEcCCC---------------------------cEEEeeccchhccccccccccCcchhc
Confidence            68999999999999999999995544                           4566666655432211        112


Q ss_pred             cccCCCcccchhhhcC-CCCccchhHhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHHHHHHhhcC
Q 025467           73 IVSTRHYRAPEVILGL-GWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRG  151 (252)
Q Consensus        73 ~~~t~~y~aPE~l~~~-~~~~~~Diws~G~~l~~l~~g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~  151 (252)
                      ..++..|+|||.+.+. .++.++|+||+||++|++++|+.||.+....+....+....+.++.+.+..+........-..
T Consensus       172 ~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  251 (337)
T cd07852         172 YVATRWYRAPEILLGSTRYTKGVDMWSVGCILGEMLLGKPLFPGTSTLNQLEKIIEVIGPPSAEDIESIKSPFAATMLDS  251 (337)
T ss_pred             ccccccccCceeeeccccccccchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHHHhhhHHHhhhh
Confidence            3578899999987653 578899999999999999999999998888888888888888777655544432211110000


Q ss_pred             CCCCCccccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCC
Q 025467          152 RLDWPEGAASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPT  231 (252)
Q Consensus       152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~  231 (252)
                       .....                                              ...........+.++.+|+.+||+.||+
T Consensus       252 -~~~~~----------------------------------------------~~~~~~~~~~~~~~l~~li~~~l~~~P~  284 (337)
T cd07852         252 -LPSRP----------------------------------------------RKPLDELLPKASDDALDLLKKLLVFNPN  284 (337)
T ss_pred             -ccccc----------------------------------------------ccchhhhccCCCHHHHHHHHHhccCCcc
Confidence             00000                                              0000111123567899999999999999


Q ss_pred             CCCCHHHHHcCCCCCCcc
Q 025467          232 DRLTAREALRHPFFTRDH  249 (252)
Q Consensus       232 ~R~ta~e~l~hpwf~~~~  249 (252)
                      +|||+.++++||||.+..
T Consensus       285 ~Rps~~~il~~~~~~~~~  302 (337)
T cd07852         285 KRLTAEEALEHPYVAQFH  302 (337)
T ss_pred             cccCHHHHhhChhhhhhc
Confidence            999999999999997653

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul

>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity

Probab=99.95  E-value=7.3e-28  Score=193.70  Aligned_cols=147  Identities=37%  Similarity=0.624  Sum_probs=108.7

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCcccc---CCCCCccccCC
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYE---RPDQNYIVSTR   77 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~---~~~~~~~~~t~   77 (252)
                      ||++||++||+|+||||+||++.                           ..+.++|+|||.+...   ........++.
T Consensus       110 ~L~~Lh~~~i~H~dikp~NIl~~---------------------------~~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~  162 (260)
T PF00069_consen  110 ALAYLHSKGIVHRDIKPENILLD---------------------------ENGEVKLIDFGSSVKLSENNENFNPFVGTP  162 (260)
T ss_dssp             HHHHHHHTTEEESSBSGGGEEES---------------------------TTSEEEESSGTTTEESTSTTSEBSSSSSSG
T ss_pred             ccccccccccccccccccccccc---------------------------cccccccccccccccccccccccccccccc
Confidence            68999999999999999999994                           4455678888877542   11222346788


Q ss_pred             Ccccchhhh-cCCCCccchhHhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHHHHHHhhcCCCCCC
Q 025467           78 HYRAPEVIL-GLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWP  156 (252)
Q Consensus        78 ~y~aPE~l~-~~~~~~~~Diws~G~~l~~l~~g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~  156 (252)
                      .|+|||++. +..++.++|+||+|+++++|++|..||...........+..........              .      
T Consensus       163 ~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~--------------~------  222 (260)
T PF00069_consen  163 EYMAPEVLQQGKKYTRKSDIWSLGIILYELLTGKLPFEESNSDDQLEIIEKILKRPLPS--------------S------  222 (260)
T ss_dssp             GGSCHHHHTTTSSBSTHHHHHHHHHHHHHHHHSSSSSTTSSHHHHHHHHHHHHHTHHHH--------------H------
T ss_pred             cccccccccccccccccccccccccccccccccccccccccchhhhhhhhhcccccccc--------------c------
Confidence            999999998 6778999999999999999999999998764333333333322111000              0      


Q ss_pred             ccccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCCCCCH
Q 025467          157 EGAASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTA  236 (252)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~ta  236 (252)
                                                                         ..........+.+++.+||+.||++|||+
T Consensus       223 ---------------------------------------------------~~~~~~~~~~l~~li~~~l~~~p~~R~~~  251 (260)
T PF00069_consen  223 ---------------------------------------------------SQQSREKSEELRDLIKKMLSKDPEQRPSA  251 (260)
T ss_dssp             ---------------------------------------------------TTSHTTSHHHHHHHHHHHSSSSGGGSTTH
T ss_pred             ---------------------------------------------------ccccchhHHHHHHHHHHHccCChhHCcCH
Confidence                                                               00001123689999999999999999999


Q ss_pred             HHHHcCCCC
Q 025467          237 REALRHPFF  245 (252)
Q Consensus       237 ~e~l~hpwf  245 (252)
                      +++++||||
T Consensus       252 ~~l~~~~~~  260 (260)
T PF00069_consen  252 EELLKHPWF  260 (260)
T ss_dssp             HHHHTSGGG
T ss_pred             HHHhcCCCC
Confidence            999999998

Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....

>KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms]

Probab=99.95  E-value=7.4e-28  Score=200.86  Aligned_cols=137  Identities=28%  Similarity=0.391  Sum_probs=105.2

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCCCc-c---ccC
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNY-I---VST   76 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~~~-~---~~t   76 (252)
                      |++||+++++|||||.++||||+.+.                           .+||+|||+|+........ .   --+
T Consensus       315 GM~YLes~~~IHRDLAARNiLV~~~~---------------------------~vKIsDFGLAr~~~d~~Y~~~~~~kfP  367 (468)
T KOG0197|consen  315 GMAYLESKNYIHRDLAARNILVDEDL---------------------------VVKISDFGLARLIGDDEYTASEGGKFP  367 (468)
T ss_pred             HHHHHHhCCccchhhhhhheeeccCc---------------------------eEEEcccccccccCCCceeecCCCCCC
Confidence            58999999999999999999996554                           4555666665532222111 1   124


Q ss_pred             CCcccchhhhcCCCCccchhHhHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHHHHHHhhcCCCCC
Q 025467           77 RHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDW  155 (252)
Q Consensus        77 ~~y~aPE~l~~~~~~~~~Diws~G~~l~~l~~-g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~  155 (252)
                      ..|+|||++..+.|+.++|||||||+|||++| |+.||.+.+..+++..+.+-.                      +++.
T Consensus       368 IkWtAPEa~~~~~FS~kSDVWSFGVlL~E~fT~G~~py~~msn~ev~~~le~Gy----------------------Rlp~  425 (468)
T KOG0197|consen  368 IKWTAPEALNYGKFSSKSDVWSFGVLLWELFTYGRVPYPGMSNEEVLELLERGY----------------------RLPR  425 (468)
T ss_pred             ceecCHHHHhhCCcccccceeehhhhHHHHhccCCCCCCCCCHHHHHHHHhccC----------------------cCCC
Confidence            56999999999999999999999999999999 999999988888776654321                      1222


Q ss_pred             CccccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCCCCC
Q 025467          156 PEGAASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLT  235 (252)
Q Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~t  235 (252)
                      |                                                       ...++.+.++|..||..+|++|||
T Consensus       426 P-------------------------------------------------------~~CP~~vY~lM~~CW~~~P~~RPt  450 (468)
T KOG0197|consen  426 P-------------------------------------------------------EGCPDEVYELMKSCWHEDPEDRPT  450 (468)
T ss_pred             C-------------------------------------------------------CCCCHHHHHHHHHHhhCCcccCCC
Confidence            2                                                       345679999999999999999999


Q ss_pred             HHHHHc
Q 025467          236 AREALR  241 (252)
Q Consensus       236 a~e~l~  241 (252)
                      ++.+..
T Consensus       451 F~~L~~  456 (468)
T KOG0197|consen  451 FETLRE  456 (468)
T ss_pred             HHHHHH
Confidence            987653

>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3

Probab=99.95  E-value=4.6e-27  Score=191.81  Aligned_cols=171  Identities=32%  Similarity=0.563  Sum_probs=118.6

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCC---CccccCC
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ---NYIVSTR   77 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~---~~~~~t~   77 (252)
                      ||+|||+.||+|+||+|+||+++.                           +..++++|||.+.......   ....++.
T Consensus       112 ~l~~LH~~~i~h~~l~p~ni~~~~---------------------------~~~~~l~dfg~~~~~~~~~~~~~~~~~~~  164 (286)
T cd07846         112 GIEFCHSHNIIHRDIKPENILVSQ---------------------------SGVVKLCDFGFARTLAAPGEVYTDYVATR  164 (286)
T ss_pred             HHHHHHHCCccccCCCHHHEEECC---------------------------CCcEEEEeeeeeeeccCCccccCccccee
Confidence            589999999999999999999944                           4456777777765432211   1235678


Q ss_pred             CcccchhhhcC-CCCccchhHhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHHHHHHhhcCCCCCC
Q 025467           78 HYRAPEVILGL-GWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWP  156 (252)
Q Consensus        78 ~y~aPE~l~~~-~~~~~~Diws~G~~l~~l~~g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~  156 (252)
                      .|+|||++.+. .++.++|+||+||+++++++|.+||.+....+.+..+....+.+++...........   ..+     
T Consensus       165 ~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~-----  236 (286)
T cd07846         165 WYRAPELLVGDTKYGRAVDIWAVGCLVTEMLTGEPLFPGDSDIDQLYHIIKCLGNLIPRHQEIFQKNPL---FAG-----  236 (286)
T ss_pred             eccCcHHhccccccCchHhHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHHhCCCchhhHHHhccchH---hhc-----
Confidence            89999998764 467889999999999999999999988777777777777777655432221110000   000     


Q ss_pred             ccccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCCCCCH
Q 025467          157 EGAASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTA  236 (252)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~ta  236 (252)
                                  ...+...                           ............+..+.+|+.+||+.+|++|||+
T Consensus       237 ------------~~~~~~~---------------------------~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~  277 (286)
T cd07846         237 ------------MRLPEVK---------------------------EIEPLEKRFPKLSGLVLDLAKQCLRIDPDDRPSS  277 (286)
T ss_pred             ------------ccccccc---------------------------CcchHHHhCCCcCHHHHHHHHHHhcCCcccchhH
Confidence                        0000000                           0000011123456789999999999999999999


Q ss_pred             HHHHcCCCC
Q 025467          237 REALRHPFF  245 (252)
Q Consensus       237 ~e~l~hpwf  245 (252)
                      .++++||||
T Consensus       278 ~~il~~~~~  286 (286)
T cd07846         278 SQLLHHEFF  286 (286)
T ss_pred             HHHhcCCCC
Confidence            999999998

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI

>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2

Probab=99.95  E-value=1.3e-27  Score=196.30  Aligned_cols=147  Identities=30%  Similarity=0.488  Sum_probs=108.5

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCC---CccccCC
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ---NYIVSTR   77 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~---~~~~~t~   77 (252)
                      ||+|||++|++|+||||+||+++.++                           .++|+|||.+.......   ....++.
T Consensus       127 al~~LH~~~i~H~dL~p~Nili~~~~---------------------------~~kl~dfg~~~~~~~~~~~~~~~~~~~  179 (296)
T cd06655         127 ALEFLHANQVIHRDIKSDNVLLGMDG---------------------------SVKLTDFGFCAQITPEQSKRSTMVGTP  179 (296)
T ss_pred             HHHHHHHCCcccCCCCHHHEEECCCC---------------------------CEEEccCccchhcccccccCCCcCCCc
Confidence            58999999999999999999995444                           46666666654332211   1235778


Q ss_pred             CcccchhhhcCCCCccchhHhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHHHHHHhhcCCCCCCc
Q 025467           78 HYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPE  157 (252)
Q Consensus        78 ~y~aPE~l~~~~~~~~~Diws~G~~l~~l~~g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~  157 (252)
                      .|+|||.+.+..++.++|+||+||++|++++|..||.+.+.......+.. .+..+                   +    
T Consensus       180 ~y~aPE~~~~~~~~~~~Dv~slGvil~~lltg~~pf~~~~~~~~~~~~~~-~~~~~-------------------~----  235 (296)
T cd06655         180 YWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIAT-NGTPE-------------------L----  235 (296)
T ss_pred             cccCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHh-cCCcc-------------------c----
Confidence            89999999888889999999999999999999999977654333222111 00000                   0    


Q ss_pred             cccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCCCCCHH
Q 025467          158 GAASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAR  237 (252)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~ta~  237 (252)
                                                                         ......+..+.+|+.+||..||.+|||+.
T Consensus       236 ---------------------------------------------------~~~~~~~~~~~~li~~~l~~dp~~Rpt~~  264 (296)
T cd06655         236 ---------------------------------------------------QNPEKLSPIFRDFLNRCLEMDVEKRGSAK  264 (296)
T ss_pred             ---------------------------------------------------CCcccCCHHHHHHHHHHhhcChhhCCCHH
Confidence                                                               00122345789999999999999999999


Q ss_pred             HHHcCCCCCCcc
Q 025467          238 EALRHPFFTRDH  249 (252)
Q Consensus       238 e~l~hpwf~~~~  249 (252)
                      +++.||||....
T Consensus       265 ~il~~~~~~~~~  276 (296)
T cd06655         265 ELLQHPFLKLAK  276 (296)
T ss_pred             HHhhChHhhhcc
Confidence            999999998643

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1

Probab=99.95  E-value=1.3e-27  Score=196.26  Aligned_cols=147  Identities=28%  Similarity=0.471  Sum_probs=107.8

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCC---CCccccCC
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD---QNYIVSTR   77 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~---~~~~~~t~   77 (252)
                      ||+|||+.||+||||||+||+++.+                           ..++|+|||.+......   .....++.
T Consensus       128 aL~~LH~~gi~H~dLkp~Nill~~~---------------------------~~~kl~dfg~~~~~~~~~~~~~~~~~~~  180 (296)
T cd06654         128 ALEFLHSNQVIHRDIKSDNILLGMD---------------------------GSVKLTDFGFCAQITPEQSKRSTMVGTP  180 (296)
T ss_pred             HHHHHHHCCcccCCCCHHHEEEcCC---------------------------CCEEECccccchhccccccccCcccCCc
Confidence            6899999999999999999999544                           34667777765432221   12236788


Q ss_pred             CcccchhhhcCCCCccchhHhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHHHHHHhhcCCCCCCc
Q 025467           78 HYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPE  157 (252)
Q Consensus        78 ~y~aPE~l~~~~~~~~~Diws~G~~l~~l~~g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~  157 (252)
                      .|+|||.+.+..++.++|+||+||++|++++|..||...+....+..+.. .+..+                   .    
T Consensus       181 ~y~aPE~~~~~~~~~~~Dv~s~Gvil~~l~~g~~pf~~~~~~~~~~~~~~-~~~~~-------------------~----  236 (296)
T cd06654         181 YWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIAT-NGTPE-------------------L----  236 (296)
T ss_pred             cccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCCCCCHHHhHHHHhc-CCCCC-------------------C----
Confidence            99999999888889999999999999999999999976543222211100 00000                   0    


Q ss_pred             cccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCCCCCHH
Q 025467          158 GAASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAR  237 (252)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~ta~  237 (252)
                                                                         ......+..+.+|+.+||+.||++|||+.
T Consensus       237 ---------------------------------------------------~~~~~~~~~l~~li~~~l~~~p~~Rpt~~  265 (296)
T cd06654         237 ---------------------------------------------------QNPEKLSAIFRDFLNRCLDMDVEKRGSAK  265 (296)
T ss_pred             ---------------------------------------------------CCccccCHHHHHHHHHHCcCCcccCcCHH
Confidence                                                               00112345789999999999999999999


Q ss_pred             HHHcCCCCCCcc
Q 025467          238 EALRHPFFTRDH  249 (252)
Q Consensus       238 e~l~hpwf~~~~  249 (252)
                      ++++||||....
T Consensus       266 eil~~~~~~~~~  277 (296)
T cd06654         266 ELLQHQFLKIAK  277 (296)
T ss_pred             HHhhChhhhccC
Confidence            999999998754

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha

Probab=99.95  E-value=1.2e-27  Score=199.55  Aligned_cols=148  Identities=27%  Similarity=0.469  Sum_probs=106.3

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCC----CCccccC
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD----QNYIVST   76 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~----~~~~~~t   76 (252)
                      ||+|||++||+||||||+|||++.                           .+.++|+|||++......    ....+||
T Consensus       114 al~~lH~~~iiHrDlkp~Nili~~---------------------------~~~~kL~DfG~a~~~~~~~~~~~~~~~gt  166 (332)
T cd05623         114 AIDSVHQLHYVHRDIKPDNILMDM---------------------------NGHIRLADFGSCLKLMEDGTVQSSVAVGT  166 (332)
T ss_pred             HHHHHHHCCeEecCCCHHHEEECC---------------------------CCCEEEeecchheecccCCcceecccccC
Confidence            689999999999999999999944                           445677777776532211    1124689


Q ss_pred             CCcccchhhhc-----CCCCccchhHhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHHHHHHhhcC
Q 025467           77 RHYRAPEVILG-----LGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRG  151 (252)
Q Consensus        77 ~~y~aPE~l~~-----~~~~~~~Diws~G~~l~~l~~g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~  151 (252)
                      +.|+|||++..     ..++.++||||+||++|+|++|..||.+.+.......+....                     .
T Consensus       167 ~~y~aPE~~~~~~~~~~~~~~~~DvwSlGvil~ell~g~~Pf~~~~~~~~~~~i~~~~---------------------~  225 (332)
T cd05623         167 PDYISPEILQAMEDGKGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHK---------------------E  225 (332)
T ss_pred             ccccCHHHHhccccCCCCCCCcCCEEeeHHHHHHHhcCCCCCCCCCHHHHHHHHhCCC---------------------c
Confidence            99999999863     357889999999999999999999998765444333221100                     0


Q ss_pred             CCCCCccccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCC
Q 025467          152 RLDWPEGAASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPT  231 (252)
Q Consensus       152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~  231 (252)
                      ....+.                                                    .....+.++++|+++||..++.
T Consensus       226 ~~~~p~----------------------------------------------------~~~~~s~~~~~li~~ll~~~~~  253 (332)
T cd05623         226 RFQFPA----------------------------------------------------QVTDVSEDAKDLIRRLICSREH  253 (332)
T ss_pred             cccCCC----------------------------------------------------ccccCCHHHHHHHHHHccChhh
Confidence            000110                                                    0123457899999999976555


Q ss_pred             C--CCCHHHHHcCCCCCCc
Q 025467          232 D--RLTAREALRHPFFTRD  248 (252)
Q Consensus       232 ~--R~ta~e~l~hpwf~~~  248 (252)
                      +  |+|++++++||||...
T Consensus       254 r~~r~~~~~~~~h~~f~~~  272 (332)
T cd05623         254 RLGQNGIEDFKQHPFFTGI  272 (332)
T ss_pred             hcCCCCHHHHhCCCCcCCC
Confidence            4  6899999999999864

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw

>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6

Probab=99.95  E-value=1.4e-27  Score=194.59  Aligned_cols=142  Identities=27%  Similarity=0.460  Sum_probs=103.1

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCC---CCccccCC
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD---QNYIVSTR   77 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~---~~~~~~t~   77 (252)
                      ||+|||+.||+|+||+|+||++..                           ...++|+|||.+......   .....|+.
T Consensus       133 al~~LH~~~ivH~dl~~~nili~~---------------------------~~~~~l~dfg~~~~~~~~~~~~~~~~~~~  185 (282)
T cd06636         133 GLAHLHAHKVIHRDIKGQNVLLTE---------------------------NAEVKLVDFGVSAQLDRTVGRRNTFIGTP  185 (282)
T ss_pred             HHHHHHHCCcccCCCCHHHEEECC---------------------------CCCEEEeeCcchhhhhccccCCCcccccc
Confidence            689999999999999999999954                           345677777776543211   12246788


Q ss_pred             Ccccchhhhc-----CCCCccchhHhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHHHHHHhhcCC
Q 025467           78 HYRAPEVILG-----LGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGR  152 (252)
Q Consensus        78 ~y~aPE~l~~-----~~~~~~~Diws~G~~l~~l~~g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~  152 (252)
                      .|+|||.+..     ..++.++|+||+||++|++++|..||...........+..   ..                   .
T Consensus       186 ~y~aPE~l~~~~~~~~~~~~~~DvwslG~~l~el~~g~~p~~~~~~~~~~~~~~~---~~-------------------~  243 (282)
T cd06636         186 YWMAPEVIACDENPDATYDYRSDIWSLGITAIEMAEGAPPLCDMHPMRALFLIPR---NP-------------------P  243 (282)
T ss_pred             cccCHhhcCcccCcCcCCCcccchhHHHHHHHHHHhCCCCccccCHHhhhhhHhh---CC-------------------C
Confidence            9999999862     3577889999999999999999999965433221111000   00                   0


Q ss_pred             CCCCccccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCC
Q 025467          153 LDWPEGAASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTD  232 (252)
Q Consensus       153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~  232 (252)
                      ..                                                      ......+.++.+||.+||..||.+
T Consensus       244 ~~------------------------------------------------------~~~~~~~~~~~~li~~cl~~~p~~  269 (282)
T cd06636         244 PK------------------------------------------------------LKSKKWSKKFIDFIEGCLVKNYLS  269 (282)
T ss_pred             CC------------------------------------------------------CcccccCHHHHHHHHHHhCCChhh
Confidence            00                                                      000123468999999999999999


Q ss_pred             CCCHHHHHcCCCC
Q 025467          233 RLTAREALRHPFF  245 (252)
Q Consensus       233 R~ta~e~l~hpwf  245 (252)
                      |||+.|+++||||
T Consensus       270 Rp~~~ell~~~~~  282 (282)
T cd06636         270 RPSTEQLLKHPFI  282 (282)
T ss_pred             CcCHHHHhcCCCC
Confidence            9999999999998

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea

>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases

Probab=99.94  E-value=2.8e-27  Score=192.94  Aligned_cols=171  Identities=29%  Similarity=0.451  Sum_probs=116.2

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCC----CccccC
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ----NYIVST   76 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~----~~~~~t   76 (252)
                      ||+|||++|++|+||+|+||+++.+                           +.++++|||.+.......    ....++
T Consensus       112 al~~LH~~~~~h~dl~p~nil~~~~---------------------------~~~~l~d~g~~~~~~~~~~~~~~~~~~~  164 (287)
T cd07840         112 GLQYLHSNGILHRDIKGSNILINND---------------------------GVLKLADFGLARPYTKRNSADYTNRVIT  164 (287)
T ss_pred             HHHHHHHCCceeccCcHHHeEEcCC---------------------------CCEEEccccceeeccCCCcccccccccc
Confidence            6899999999999999999999544                           446666666655433221    223557


Q ss_pred             CCcccchhhhcC-CCCccchhHhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHHHHHHhhcCCCCC
Q 025467           77 RHYRAPEVILGL-GWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDW  155 (252)
Q Consensus        77 ~~y~aPE~l~~~-~~~~~~Diws~G~~l~~l~~g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~  155 (252)
                      ..|+|||.+.+. .++.++||||+||+++++++|..||...+....+..+....+.++...+........  ........
T Consensus       165 ~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~t~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~  242 (287)
T cd07840         165 LWYRPPELLLGATRYGPEVDMWSVGCILAELFLGKPIFQGSTELEQLEKIFELCGSPTDENWPGVSKLPW--FENLKPKK  242 (287)
T ss_pred             cccCCceeeEccccCChHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchhhccccccchh--hhhccccc
Confidence            789999987654 578999999999999999999999988877777777766666554333222111000  00000000


Q ss_pred             CccccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCCCCC
Q 025467          156 PEGAASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLT  235 (252)
Q Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~t  235 (252)
                          ...                                         ...........+..+.+++.+||..+|.+|||
T Consensus       243 ----~~~-----------------------------------------~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~  277 (287)
T cd07840         243 ----PYK-----------------------------------------RRLREFFKHLIDPSALDLLDKLLTLDPKKRIS  277 (287)
T ss_pred             ----cch-----------------------------------------hHHHHHhcccCCHHHHHHHHHHcCCChhhCcC
Confidence                000                                         00000011114678999999999999999999


Q ss_pred             HHHHHcCCCC
Q 025467          236 AREALRHPFF  245 (252)
Q Consensus       236 a~e~l~hpwf  245 (252)
                      ++++++||||
T Consensus       278 ~~~~l~~~~~  287 (287)
T cd07840         278 ADQALQHEYF  287 (287)
T ss_pred             HHHHhhCcCC
Confidence            9999999998

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po

>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases

Probab=99.94  E-value=2.5e-27  Score=196.24  Aligned_cols=172  Identities=28%  Similarity=0.424  Sum_probs=115.3

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceE--EeecCCc---cccCCCCCcccc
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIK--VIDFGST---TYERPDQNYIVS   75 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~--l~dfg~~---~~~~~~~~~~~~   75 (252)
                      ||+|||+.|++|+||||+||+++.++.+++.|||++....................  .......   ...........|
T Consensus       115 ~l~~lH~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g  194 (316)
T cd05574         115 ALEYLHLLGIVYRDLKPENILLHESGHIMLSDFDLSKQSDVEPPPVSKALRKGSRRSSVNSIPSETFSEEPSFRSNSFVG  194 (316)
T ss_pred             HHHHHHHCCeeccCCChHHeEEcCCCCEEEeecchhhcccccccccccccccccccccccccchhhhcccccCCCCCCcC
Confidence            58999999999999999999998888888888887654332211100000000000  0000000   000011122467


Q ss_pred             CCCcccchhhhcCCCCccchhHhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHHHHHHhhcCCCCC
Q 025467           76 TRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDW  155 (252)
Q Consensus        76 t~~y~aPE~l~~~~~~~~~Diws~G~~l~~l~~g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~  155 (252)
                      +..|+|||++.+..++.++||||+||++|++++|..||.+.+....+..+...                       ...+
T Consensus       195 ~~~y~aPE~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~-----------------------~~~~  251 (316)
T cd05574         195 TEEYIAPEVISGDGHGSAVDWWTLGILLYEMLYGTTPFKGSNRDETFSNILKK-----------------------EVTF  251 (316)
T ss_pred             ccCCcCHHHHcCCCCCchHHHHHHHHHHHHHhhCCCCCCCCchHHHHHHHhcC-----------------------CccC
Confidence            88999999998888899999999999999999999999876544333222110                       0000


Q ss_pred             CccccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCCCCC
Q 025467          156 PEGAASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLT  235 (252)
Q Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~t  235 (252)
                      +.                                                     ....+..+.+++.+||+.||++|||
T Consensus       252 ~~-----------------------------------------------------~~~~~~~~~~li~~~l~~~p~~R~s  278 (316)
T cd05574         252 PG-----------------------------------------------------SPPVSSSARDLIRKLLVKDPSKRLG  278 (316)
T ss_pred             CC-----------------------------------------------------ccccCHHHHHHHHHHccCCHhHCCC
Confidence            00                                                     0114568999999999999999999


Q ss_pred             ----HHHHHcCCCCCCc
Q 025467          236 ----AREALRHPFFTRD  248 (252)
Q Consensus       236 ----a~e~l~hpwf~~~  248 (252)
                          ++++|.||||++.
T Consensus       279 ~~~~~~~ll~~~~~~~~  295 (316)
T cd05574         279 SKRGAAEIKQHPFFRGV  295 (316)
T ss_pred             chhhHHHHHcCchhhcC
Confidence                9999999999875

Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin

>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase

Probab=99.94  E-value=3.2e-27  Score=193.37  Aligned_cols=144  Identities=30%  Similarity=0.526  Sum_probs=111.5

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCCCccccCCCcc
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYR   80 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~~~~~~t~~y~   80 (252)
                      ||+|||+.||+|+||+|+||++..                           .+.++|+|||.+...........+++.|+
T Consensus       113 ~l~~lH~~~i~H~dl~p~nili~~---------------------------~~~~kl~dfg~~~~~~~~~~~~~~~~~y~  165 (290)
T cd05580         113 ALEYLHSLDIVYRDLKPENLLLDS---------------------------DGYIKITDFGFAKRVKGRTYTLCGTPEYL  165 (290)
T ss_pred             HHHHHHHCCEecCCCCHHHEEECC---------------------------CCCEEEeeCCCccccCCCCCCCCCCcccc
Confidence            689999999999999999999944                           44577888887765544444456888999


Q ss_pred             cchhhhcCCCCccchhHhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHHHHHHhhcCCCCCCcccc
Q 025467           81 APEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAA  160 (252)
Q Consensus        81 aPE~l~~~~~~~~~Diws~G~~l~~l~~g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (252)
                      |||.+.+..++.++|+||+|+++++|++|..||...+.......+..  +                     ....+    
T Consensus       166 aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~--~---------------------~~~~~----  218 (290)
T cd05580         166 APEIILSKGYGKAVDWWALGILIYEMLAGYPPFFDDNPIQIYEKILE--G---------------------KVRFP----  218 (290)
T ss_pred             ChhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhc--C---------------------CccCC----
Confidence            99999888888999999999999999999999976553322222211  0                     01011    


Q ss_pred             chhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCCCC-----C
Q 025467          161 SRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRL-----T  235 (252)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~-----t  235 (252)
                                                                         ...+..+.++|.+||+.||.+|+     +
T Consensus       219 ---------------------------------------------------~~~~~~l~~li~~~l~~~p~~R~~~~~~~  247 (290)
T cd05580         219 ---------------------------------------------------SFFSPDAKDLIRNLLQVDLTKRLGNLKNG  247 (290)
T ss_pred             ---------------------------------------------------ccCCHHHHHHHHHHccCCHHHccCcccCC
Confidence                                                               12245889999999999999999     9


Q ss_pred             HHHHHcCCCCCCcc
Q 025467          236 AREALRHPFFTRDH  249 (252)
Q Consensus       236 a~e~l~hpwf~~~~  249 (252)
                      ++++++||||...+
T Consensus       248 ~~~l~~~~~~~~~~  261 (290)
T cd05580         248 VNDIKNHPWFAGID  261 (290)
T ss_pred             HHHHHcCcccccCC
Confidence            99999999998764

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi

>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85

Probab=99.94  E-value=6e-27  Score=190.96  Aligned_cols=169  Identities=33%  Similarity=0.542  Sum_probs=117.1

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCC---CCccccCC
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD---QNYIVSTR   77 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~---~~~~~~t~   77 (252)
                      ||+|||++|++||||+|+||+++.+                           +.++++|||.+......   .....++.
T Consensus       112 ~l~~lH~~~i~h~dl~p~ni~~~~~---------------------------~~~~l~d~g~~~~~~~~~~~~~~~~~~~  164 (284)
T cd07836         112 GIAFCHENRVLHRDLKPQNLLINKR---------------------------GELKLADFGLARAFGIPVNTFSNEVVTL  164 (284)
T ss_pred             HHHHHHHCCeeeCCCCHHHEEECCC---------------------------CcEEEeecchhhhhcCCccccccccccc
Confidence            6899999999999999999999544                           44666777666432221   11235678


Q ss_pred             CcccchhhhcC-CCCccchhHhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHHHHHHhhcCCCCCC
Q 025467           78 HYRAPEVILGL-GWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWP  156 (252)
Q Consensus        78 ~y~aPE~l~~~-~~~~~~Diws~G~~l~~l~~g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~  156 (252)
                      .|++||++.+. .++.++|+||+||++|++++|..||.+.+..+....+....+.+....+..+.... .+.    ...+
T Consensus       165 ~y~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~----~~~~  239 (284)
T cd07836         165 WYRAPDVLLGSRTYSTSIDIWSVGCIMAEMITGRPLFPGTNNEDQLLKIFRIMGTPTESTWPGISQLP-EYK----PTFP  239 (284)
T ss_pred             cccChHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCChhhHHHHhcCc-hhc----cccc
Confidence            89999998764 46889999999999999999999999887777777776666655544333222000 000    0000


Q ss_pred             ccccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCCCCCH
Q 025467          157 EGAASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTA  236 (252)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~ta  236 (252)
                      ..  ..                                          ..........+..+.+++.+||+.||.+|||+
T Consensus       240 ~~--~~------------------------------------------~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~  275 (284)
T cd07836         240 RY--PP------------------------------------------QDLQQLFPHADPLGIDLLHRLLQLNPELRISA  275 (284)
T ss_pred             CC--Ch------------------------------------------HHHHHHhhhcCcHHHHHHHHHhcCCcccCCCH
Confidence            00  00                                          00000112346789999999999999999999


Q ss_pred             HHHHcCCCC
Q 025467          237 REALRHPFF  245 (252)
Q Consensus       237 ~e~l~hpwf  245 (252)
                      .++++||||
T Consensus       276 ~~~l~~~~f  284 (284)
T cd07836         276 HDALQHPWF  284 (284)
T ss_pred             HHHhcCCCC
Confidence            999999998

Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.

>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6

Probab=99.94  E-value=7.5e-27  Score=195.58  Aligned_cols=173  Identities=27%  Similarity=0.509  Sum_probs=111.9

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCC------CCccc
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD------QNYIV   74 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~------~~~~~   74 (252)
                      ||+|||++||+||||||+||+++.+                          ...++++|||.+......      .....
T Consensus       126 aL~~LH~~givH~dikp~Nili~~~--------------------------~~~~kl~dfg~~~~~~~~~~~~~~~~~~~  179 (342)
T cd07854         126 GLKYIHSANVLHRDLKPANVFINTE--------------------------DLVLKIGDFGLARIVDPHYSHKGYLSEGL  179 (342)
T ss_pred             HHHHHHhCCcccCCCCHHHEEEcCC--------------------------CceEEECCcccceecCCcccccccccccc
Confidence            6899999999999999999999532                          223566666665432211      11235


Q ss_pred             cCCCcccchhhhc-CCCCccchhHhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHHHHHHhhcCCC
Q 025467           75 STRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRL  153 (252)
Q Consensus        75 ~t~~y~aPE~l~~-~~~~~~~Diws~G~~l~~l~~g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~  153 (252)
                      ++..|+|||.+.. ..++.++|+||+||++|++++|..||.+.+.......+........................... 
T Consensus       180 ~~~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-  258 (342)
T cd07854         180 VTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKPLFAGAHELEQMQLILESVPVVREEDRNELLNVIPSFVRNDG-  258 (342)
T ss_pred             ccccccCHHHHhCccccCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCChHHhhhhhhhhhhhhhhcc-
Confidence            6788999998765 45788999999999999999999999877766555544443332222111111000000000000 


Q ss_pred             CCCccccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCCC
Q 025467          154 DWPEGAASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDR  233 (252)
Q Consensus       154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R  233 (252)
                                      ..+                               ...........+.++.+|+.+||+.||.+|
T Consensus       259 ----------------~~~-------------------------------~~~~~~~~~~~~~~~~~li~~~L~~dP~~R  291 (342)
T cd07854         259 ----------------GEP-------------------------------RRPLRDLLPGVNPEALDFLEQILTFNPMDR  291 (342)
T ss_pred             ----------------ccc-------------------------------CCCHHHHccCCCHHHHHHHHHHhCCCchhc
Confidence                            000                               000001112356789999999999999999


Q ss_pred             CCHHHHHcCCCCCC
Q 025467          234 LTAREALRHPFFTR  247 (252)
Q Consensus       234 ~ta~e~l~hpwf~~  247 (252)
                      ||+++++.||||+.
T Consensus       292 ~t~~ell~h~~~~~  305 (342)
T cd07854         292 LTAEEALMHPYMSC  305 (342)
T ss_pred             cCHHHHhCCCcccc
Confidence            99999999999973

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi

>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3

Probab=99.94  E-value=2.2e-27  Score=193.34  Aligned_cols=147  Identities=29%  Similarity=0.462  Sum_probs=105.4

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCC-CCccccCCCc
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD-QNYIVSTRHY   79 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~-~~~~~~t~~y   79 (252)
                      ||+|||++||+||||||+|||++.+                           ..++++|||.+...... .....|+..|
T Consensus       109 al~~lH~~~ivH~dikp~Nil~~~~---------------------------~~~~l~dfg~~~~~~~~~~~~~~~~~~y  161 (279)
T cd05633         109 GLEHMHNRFVVYRDLKPANILLDEH---------------------------GHVRISDLGLACDFSKKKPHASVGTHGY  161 (279)
T ss_pred             HHHHHHHCCcCCCCCCHHHEEECCC---------------------------CCEEEccCCcceeccccCccCcCCCcCc
Confidence            6899999999999999999999543                           45667777766432221 1223688899


Q ss_pred             ccchhhhc-CCCCccchhHhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHHHHHHhhcCCCCCCcc
Q 025467           80 RAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEG  158 (252)
Q Consensus        80 ~aPE~l~~-~~~~~~~Diws~G~~l~~l~~g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~  158 (252)
                      +|||.+.. ..++.++|+||+||+++++++|..||......... .+.....                   ....     
T Consensus       162 ~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~-~~~~~~~-------------------~~~~-----  216 (279)
T cd05633         162 MAPEVLQKGTAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKH-EIDRMTL-------------------TVNV-----  216 (279)
T ss_pred             cCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcCCCCCcCHH-HHHHHhh-------------------cCCc-----
Confidence            99999864 45789999999999999999999999754321100 0000000                   0000     


Q ss_pred             ccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCCCC----
Q 025467          159 AASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRL----  234 (252)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~----  234 (252)
                                                                        ......+.++.++|.+||..||++|+    
T Consensus       217 --------------------------------------------------~~~~~~~~~~~~li~~~l~~~p~~R~~~~~  246 (279)
T cd05633         217 --------------------------------------------------ELPDSFSPELKSLLEGLLQRDVSKRLGCLG  246 (279)
T ss_pred             --------------------------------------------------CCccccCHHHHHHHHHHhcCCHHHhcCCCC
Confidence                                                              00123456889999999999999999    


Q ss_pred             -CHHHHHcCCCCCCcc
Q 025467          235 -TAREALRHPFFTRDH  249 (252)
Q Consensus       235 -ta~e~l~hpwf~~~~  249 (252)
                       |++++++||||+...
T Consensus       247 ~~~~~~~~h~~~~~~~  262 (279)
T cd05633         247 RGAQEVKEHVFFKGID  262 (279)
T ss_pred             CCHHHHHhCccccCCC
Confidence             699999999998854

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi

>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5

Probab=99.94  E-value=9.2e-28  Score=195.54  Aligned_cols=153  Identities=25%  Similarity=0.440  Sum_probs=108.3

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCC-CCccccCCCc
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD-QNYIVSTRHY   79 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~-~~~~~~t~~y   79 (252)
                      ||+|||+.||+|+||||+||+++.                           ...++|+|||.+...... .....++..|
T Consensus       107 ~l~~lH~~~i~H~dlkp~Nill~~---------------------------~~~~~l~dfg~~~~~~~~~~~~~~~~~~y  159 (279)
T cd06619         107 GLTYLWSLKILHRDVKPSNMLVNT---------------------------RGQVKLCDFGVSTQLVNSIAKTYVGTNAY  159 (279)
T ss_pred             HHHHHHHCCEeeCCCCHHHEEECC---------------------------CCCEEEeeCCcceecccccccCCCCChhh
Confidence            689999999999999999999944                           445777777776543222 2234688899


Q ss_pred             ccchhhhcCCCCccchhHhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHHHHHHhhcCCCCCCccc
Q 025467           80 RAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGA  159 (252)
Q Consensus        80 ~aPE~l~~~~~~~~~Diws~G~~l~~l~~g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~  159 (252)
                      +|||++.+..++.++|+||+||++|++++|..||.........        ..+.......       .......     
T Consensus       160 ~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~--------~~~~~~~~~~-------~~~~~~~-----  219 (279)
T cd06619         160 MAPERISGEQYGIHSDVWSLGISFMELALGRFPYPQIQKNQGS--------LMPLQLLQCI-------VDEDPPV-----  219 (279)
T ss_pred             cCceeecCCCCCCcchHHHHHHHHHHHHhCCCCchhhcccccc--------cchHHHHHHH-------hccCCCC-----
Confidence            9999998888999999999999999999999998642211100        0000000000       0000000     


Q ss_pred             cchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCCCCCHHHH
Q 025467          160 ASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREA  239 (252)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~ta~e~  239 (252)
                                                                       ......+.++.+++.+||+.||++|||++++
T Consensus       220 -------------------------------------------------~~~~~~~~~~~~li~~~l~~~P~~Rp~~~ei  250 (279)
T cd06619         220 -------------------------------------------------LPVGQFSEKFVHFITQCMRKQPKERPAPENL  250 (279)
T ss_pred             -------------------------------------------------CCCCcCCHHHHHHHHHHhhCChhhCCCHHHH
Confidence                                                             0012244688999999999999999999999


Q ss_pred             HcCCCCCCcc
Q 025467          240 LRHPFFTRDH  249 (252)
Q Consensus       240 l~hpwf~~~~  249 (252)
                      ++||||....
T Consensus       251 l~~~~~~~~~  260 (279)
T cd06619         251 MDHPFIVQYN  260 (279)
T ss_pred             hcCccccccc
Confidence            9999998754

Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p

>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases

Probab=99.94  E-value=3e-27  Score=191.87  Aligned_cols=147  Identities=27%  Similarity=0.433  Sum_probs=109.3

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCC---CCccccCC
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD---QNYIVSTR   77 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~---~~~~~~t~   77 (252)
                      ||.|||+++++|+||+|+||+++.                           ++.++++|||.+......   .....++.
T Consensus       110 ~l~~lh~~~i~h~dl~p~ni~i~~---------------------------~~~~~l~d~g~~~~~~~~~~~~~~~~~~~  162 (274)
T cd06609         110 GLEYLHEEGKIHRDIKAANILLSE---------------------------EGDVKLADFGVSGQLTSTMSKRNTFVGTP  162 (274)
T ss_pred             HHHHHHhCCcccCCCCHHHEEECC---------------------------CCCEEEcccccceeecccccccccccCCc
Confidence            688999999999999999999954                           445677777766543322   12346778


Q ss_pred             CcccchhhhcCCCCccchhHhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHHHHHHhhcCCCCCCc
Q 025467           78 HYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPE  157 (252)
Q Consensus        78 ~y~aPE~l~~~~~~~~~Diws~G~~l~~l~~g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~  157 (252)
                      .|+|||.+.+..++.++|+||+||++|++++|..||...+.......+....  .                    ...+ 
T Consensus       163 ~y~~PE~~~~~~~~~~sDv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~--~--------------------~~~~-  219 (274)
T cd06609         163 FWMAPEVIKQSGYDEKADIWSLGITAIELAKGEPPLSDLHPMRVLFLIPKNN--P--------------------PSLE-  219 (274)
T ss_pred             cccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCcccCchHHHHHHhhhcC--C--------------------CCCc-
Confidence            8999999998889999999999999999999999997654322221111100  0                    0000 


Q ss_pred             cccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCCCCCHH
Q 025467          158 GAASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAR  237 (252)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~ta~  237 (252)
                                                                           ....+..+.+++.+||..||++|||++
T Consensus       220 -----------------------------------------------------~~~~~~~~~~~l~~~l~~~p~~Rpt~~  246 (274)
T cd06609         220 -----------------------------------------------------GNKFSKPFKDFVSLCLNKDPKERPSAK  246 (274)
T ss_pred             -----------------------------------------------------ccccCHHHHHHHHHHhhCChhhCcCHH
Confidence                                                                 001345789999999999999999999


Q ss_pred             HHHcCCCCCCccc
Q 025467          238 EALRHPFFTRDHL  250 (252)
Q Consensus       238 e~l~hpwf~~~~~  250 (252)
                      ++++||||.....
T Consensus       247 ~il~~~~~~~~~~  259 (274)
T cd06609         247 ELLKHKFIKKAKK  259 (274)
T ss_pred             HHhhChhhcCCCc
Confidence            9999999988654

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)

>KOG0589 consensus Serine/threonine protein kinase [General function prediction only]

Probab=99.94  E-value=8.2e-28  Score=199.73  Aligned_cols=141  Identities=32%  Similarity=0.591  Sum_probs=118.1

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCC---CccccCC
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ---NYIVSTR   77 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~---~~~~~t~   77 (252)
                      |+.|||+.+|+|||||+.||+++.+                           ..++|+|||+|+...+..   ...+||+
T Consensus       118 av~ylH~~~iLHRDlK~~Nifltk~---------------------------~~VkLgDfGlaK~l~~~~~~a~tvvGTp  170 (426)
T KOG0589|consen  118 AVNYLHENRVLHRDLKCANIFLTKD---------------------------KKVKLGDFGLAKILNPEDSLASTVVGTP  170 (426)
T ss_pred             HHHHHHhhhhhcccchhhhhhcccc---------------------------CceeecchhhhhhcCCchhhhheecCCC
Confidence            6899999999999999999999544                           346888888888766653   2368999


Q ss_pred             CcccchhhhcCCCCccchhHhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHh-CCCchHHHHHhhHHHHHHhhcCCCCCC
Q 025467           78 HYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVL-GPLPQHMLKRVDRHAEKYVRRGRLDWP  156 (252)
Q Consensus        78 ~y~aPE~l~~~~~~~~~Diws~G~~l~~l~~g~~pf~~~~~~~~~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~  156 (252)
                      .|++||.+.+.+|+.++||||+||++|+|++-+++|.+.+-...+.++.+.. .++|                       
T Consensus       171 ~YmcPEil~d~pYn~KSDiWsLGC~~yEm~~lk~aF~a~~m~~Li~ki~~~~~~Plp-----------------------  227 (426)
T KOG0589|consen  171 YYMCPEILSDIPYNEKSDIWSLGCCLYEMCTLKPAFKASNMSELILKINRGLYSPLP-----------------------  227 (426)
T ss_pred             cccCHHHhCCCCCCccCcchhhcchHHHHHhcccccCccchHHHHHHHhhccCCCCC-----------------------
Confidence            9999999999999999999999999999999999999887766666665544 2222                       


Q ss_pred             ccccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCCCCCH
Q 025467          157 EGAASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTA  236 (252)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~ta  236 (252)
                                                                             ...+.+++.|++.||..+|+.||||
T Consensus       228 -------------------------------------------------------~~ys~el~~lv~~~l~~~P~~RPsa  252 (426)
T KOG0589|consen  228 -------------------------------------------------------SMYSSELRSLVKSMLRKNPEHRPSA  252 (426)
T ss_pred             -------------------------------------------------------ccccHHHHHHHHHHhhcCCccCCCH
Confidence                                                                   2234588999999999999999999


Q ss_pred             HHHHcCCCCC
Q 025467          237 REALRHPFFT  246 (252)
Q Consensus       237 ~e~l~hpwf~  246 (252)
                      .++|.+|...
T Consensus       253 ~~LL~~P~l~  262 (426)
T KOG0589|consen  253 LELLRRPHLL  262 (426)
T ss_pred             HHHhhChhhh
Confidence            9999998765

>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases

Probab=99.94  E-value=3.5e-27  Score=190.68  Aligned_cols=150  Identities=27%  Similarity=0.425  Sum_probs=103.9

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCCCccccCCCcc
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYR   80 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~~~~~~t~~y~   80 (252)
                      ||+|||++|++||||+|+||+++.++.+++.|||.+.........                  ...........++..|+
T Consensus       118 ~l~~lH~~~ivH~di~p~nil~~~~~~~~l~dfg~~~~~~~~~~~------------------~~~~~~~~~~~~~~~y~  179 (267)
T cd06628         118 GLNYLHNRGIIHRDIKGANILVDNKGGIKISDFGISKKLEANSLS------------------TKTNGARPSLQGSVFWM  179 (267)
T ss_pred             HHHHHHhcCcccccCCHHHEEEcCCCCEEecccCCCccccccccc------------------CCccccccccCCCcCcc
Confidence            689999999999999999999966555555555443222110000                  00000011235778899


Q ss_pred             cchhhhcCCCCccchhHhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHHHHHHhhcCCCCCCcccc
Q 025467           81 APEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAA  160 (252)
Q Consensus        81 aPE~l~~~~~~~~~Diws~G~~l~~l~~g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (252)
                      |||.+.+..++.++|+||+||++|++++|..||...+.......+...  ..                    .       
T Consensus       180 ~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~--~~--------------------~-------  230 (267)
T cd06628         180 APEVVKQTSYTRKADIWSLGCLVVEMLTGKHPFPDCTQLQAIFKIGEN--AS--------------------P-------  230 (267)
T ss_pred             ChhHhccCCCCchhhhHHHHHHHHHHhhCCCCCCCccHHHHHHHHhcc--CC--------------------C-------
Confidence            999998888889999999999999999999999765443222211110  00                    0       


Q ss_pred             chhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCCCCCHHHHH
Q 025467          161 SRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREAL  240 (252)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~ta~e~l  240 (252)
                                                                      ......+..+.++|.+||+.||.+|||+.+++
T Consensus       231 ------------------------------------------------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il  262 (267)
T cd06628         231 ------------------------------------------------EIPSNISSEAIDFLEKTFEIDHNKRPTAAELL  262 (267)
T ss_pred             ------------------------------------------------cCCcccCHHHHHHHHHHccCCchhCcCHHHHh
Confidence                                                            00122456889999999999999999999999


Q ss_pred             cCCCC
Q 025467          241 RHPFF  245 (252)
Q Consensus       241 ~hpwf  245 (252)
                      +||||
T Consensus       263 ~~~~~  267 (267)
T cd06628         263 KHPFL  267 (267)
T ss_pred             hCCCC
Confidence            99998

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate

>KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.94  E-value=1.1e-27  Score=201.87  Aligned_cols=145  Identities=28%  Similarity=0.463  Sum_probs=116.1

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCCCccccCCCcc
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYR   80 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~~~~~~t~~y~   80 (252)
                      ||+|||+++.||||||+.|||++.                           .+.+||+|||.|....+..++ +|||+||
T Consensus       138 gLaYLHS~~~IHRDiKAGNILLse---------------------------~g~VKLaDFGSAsi~~PAnsF-vGTPywM  189 (948)
T KOG0577|consen  138 GLAYLHSHNRIHRDIKAGNILLSE---------------------------PGLVKLADFGSASIMAPANSF-VGTPYWM  189 (948)
T ss_pred             HHHHHHHhhHHhhhccccceEecC---------------------------CCeeeeccccchhhcCchhcc-cCCcccc
Confidence            689999999999999999999955                           446788888888776665544 8999999


Q ss_pred             cchhhhc---CCCCccchhHhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHHHHHHhhcCCCCCCc
Q 025467           81 APEVILG---LGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPE  157 (252)
Q Consensus        81 aPE~l~~---~~~~~~~Diws~G~~l~~l~~g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~  157 (252)
                      |||++..   +.|+.++||||+|+++.++..+++|+-..+....+..|...-.|.                    +  . 
T Consensus       190 APEVILAMDEGqYdgkvDvWSLGITCIELAERkPPlFnMNAMSALYHIAQNesPt--------------------L--q-  246 (948)
T KOG0577|consen  190 APEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPT--------------------L--Q-  246 (948)
T ss_pred             chhHheeccccccCCccceeeccchhhhhhhcCCCccCchHHHHHHHHHhcCCCC--------------------C--C-
Confidence            9999985   469999999999999999999999987665544444433321110                    0  0 


Q ss_pred             cccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCCCCCHH
Q 025467          158 GAASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAR  237 (252)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~ta~  237 (252)
                                                                           ....+..|.+|+.+||+.-|.+|||++
T Consensus       247 -----------------------------------------------------s~eWS~~F~~Fvd~CLqKipqeRptse  273 (948)
T KOG0577|consen  247 -----------------------------------------------------SNEWSDYFRNFVDSCLQKIPQERPTSE  273 (948)
T ss_pred             -----------------------------------------------------CchhHHHHHHHHHHHHhhCcccCCcHH
Confidence                                                                 123456899999999999999999999


Q ss_pred             HHHcCCCCCCcc
Q 025467          238 EALRHPFFTRDH  249 (252)
Q Consensus       238 e~l~hpwf~~~~  249 (252)
                      ++|+|+|+.+..
T Consensus       274 ~ll~H~fv~R~R  285 (948)
T KOG0577|consen  274 ELLKHRFVLRER  285 (948)
T ss_pred             HHhhcchhccCC
Confidence            999999998764

>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases

Probab=99.94  E-value=5.5e-27  Score=191.31  Aligned_cols=167  Identities=32%  Similarity=0.595  Sum_probs=114.6

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCC--CccccCCC
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ--NYIVSTRH   78 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~--~~~~~t~~   78 (252)
                      ||+|||+++++|+||+|+||+++.+                           ..++++|||.+.......  ....++..
T Consensus       119 al~~LH~~~i~h~~l~~~nili~~~---------------------------~~~~l~dfg~~~~~~~~~~~~~~~~~~~  171 (287)
T cd07838         119 GVDFLHSHRIVHRDLKPQNILVTSD---------------------------GQVKIADFGLARIYSFEMALTSVVVTLW  171 (287)
T ss_pred             HHHHHHHCCeeeccCChhhEEEccC---------------------------CCEEEeccCcceeccCCccccccccccc
Confidence            6899999999999999999999543                           456777777665432221  12356788


Q ss_pred             cccchhhhcCCCCccchhHhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHHHHHHhhcCCCCCCcc
Q 025467           79 YRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEG  158 (252)
Q Consensus        79 y~aPE~l~~~~~~~~~Diws~G~~l~~l~~g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~  158 (252)
                      |+|||++.+..++.++|+||+||++|+|++|.+||.+....+.+..+....+.....-                  ++..
T Consensus       172 ~~~PE~~~~~~~~~~~Di~s~G~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------~~~~  233 (287)
T cd07838         172 YRAPEVLLQSSYATPVDMWSVGCIFAELFRRRPLFRGTSEADQLDKIFDVIGLPSEEE------------------WPRN  233 (287)
T ss_pred             ccChHHhccCCCCCcchhhhHHHHHHHHHhCCCcccCCChHHHHHHHHHHcCCCChHh------------------cCCC
Confidence            9999999988889999999999999999999999988777776666655444322100                  0000


Q ss_pred             ccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCCCCCHHH
Q 025467          159 AASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTARE  238 (252)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~ta~e  238 (252)
                      ....  ..   ..+..                    .        ...........+..+.+++.+||+.||.+|||+.+
T Consensus       234 ~~~~--~~---~~~~~--------------------~--------~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~  280 (287)
T cd07838         234 VSLP--RS---SFPSY--------------------T--------PRSFKSFVPEICEEGLDLLKKMLTFNPHKRISAFE  280 (287)
T ss_pred             cccc--hh---hcccc--------------------c--------ccchhhhhhhhhHHHHHHHHHHhccCCccCCCHHH
Confidence            0000  00   00000                    0        00000111234578899999999999999999999


Q ss_pred             HHcCCCC
Q 025467          239 ALRHPFF  245 (252)
Q Consensus       239 ~l~hpwf  245 (252)
                      ++.||||
T Consensus       281 il~~~~~  287 (287)
T cd07838         281 ALQHPYF  287 (287)
T ss_pred             HhcCcCC
Confidence            9999998

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both

>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional

Probab=99.94  E-value=4e-27  Score=190.64  Aligned_cols=145  Identities=28%  Similarity=0.458  Sum_probs=106.8

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCCCccccCCCcc
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYR   80 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~~~~~~t~~y~   80 (252)
                      ||+|||+.|++||||||+||++...+                          ..++++|||.+....... ...++..|+
T Consensus       121 ~l~~lH~~~i~H~dl~p~nil~~~~~--------------------------~~~~l~dfg~~~~~~~~~-~~~~~~~y~  173 (267)
T PHA03390        121 ALNDLHKHNIIHNDIKLENVLYDRAK--------------------------DRIYLCDYGLCKIIGTPS-CYDGTLDYF  173 (267)
T ss_pred             HHHHHHhCCeeeCCCCHHHEEEeCCC--------------------------CeEEEecCccceecCCCc-cCCCCCccc
Confidence            68999999999999999999995432                          156778887765443322 235788999


Q ss_pred             cchhhhcCCCCccchhHhHHHHHHHHHhCCCCCCCCChHHH-HHHHHHHhCCCchHHHHHhhHHHHHHhhcCCCCCCccc
Q 025467           81 APEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEH-LAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGA  159 (252)
Q Consensus        81 aPE~l~~~~~~~~~Diws~G~~l~~l~~g~~pf~~~~~~~~-~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~  159 (252)
                      |||++.+..++.++|+||+||+++++++|..||........ ...+.....                    ...      
T Consensus       174 aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~--------------------~~~------  227 (267)
T PHA03390        174 SPEKIKGHNYDVSFDWWAVGVLTYELLTGKHPFKEDEDEELDLESLLKRQQ--------------------KKL------  227 (267)
T ss_pred             ChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCcchhhHHHHHHhhc--------------------ccC------
Confidence            99999988899999999999999999999999975432210 010000000                    000      


Q ss_pred             cchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCCCCC-HHH
Q 025467          160 ASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLT-ARE  238 (252)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~t-a~e  238 (252)
                                                                       ......+..+.+||.+||+.||.+|++ +++
T Consensus       228 -------------------------------------------------~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~  258 (267)
T PHA03390        228 -------------------------------------------------PFIKNVSKNANDFVQSMLKYNINYRLTNYNE  258 (267)
T ss_pred             -------------------------------------------------CcccccCHHHHHHHHHHhccChhhCCchHHH
Confidence                                                             001235568999999999999999996 599


Q ss_pred             HHcCCCCCC
Q 025467          239 ALRHPFFTR  247 (252)
Q Consensus       239 ~l~hpwf~~  247 (252)
                      +|+||||+.
T Consensus       259 ~l~h~~~~~  267 (267)
T PHA03390        259 IIKHPFLKI  267 (267)
T ss_pred             HhcCCcccC
Confidence            999999973

>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases

Probab=99.94  E-value=3.6e-27  Score=196.70  Aligned_cols=93  Identities=34%  Similarity=0.574  Sum_probs=73.6

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCC----CccccC
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ----NYIVST   76 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~----~~~~~t   76 (252)
                      ||+|||++||+||||||+|||++.                           .+.++|+|||.+.......    ....||
T Consensus       114 ~l~~lH~~~ivH~dlkp~Nill~~---------------------------~~~~kl~Dfg~~~~~~~~~~~~~~~~~gt  166 (331)
T cd05597         114 AIDSVHQLGYVHRDIKPDNVLLDK---------------------------NGHIRLADFGSCLRLLADGTVQSNVAVGT  166 (331)
T ss_pred             HHHHHHhCCeEECCCCHHHEEECC---------------------------CCCEEEEECCceeecCCCCCccccceecc
Confidence            689999999999999999999943                           4457888888765432221    123689


Q ss_pred             CCcccchhhhc-----CCCCccchhHhHHHHHHHHHhCCCCCCCCChHH
Q 025467           77 RHYRAPEVILG-----LGWTYPCDIWSVGCILVELCTGEALFQTHENLE  120 (252)
Q Consensus        77 ~~y~aPE~l~~-----~~~~~~~Diws~G~~l~~l~~g~~pf~~~~~~~  120 (252)
                      +.|+|||++..     ..++.++||||+||++|+|++|..||.+....+
T Consensus       167 ~~y~aPE~~~~~~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~  215 (331)
T cd05597         167 PDYISPEILQAMEDGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVE  215 (331)
T ss_pred             ccccCHHHHhhccccccCCCCcceeehhhhHHHHHhhCCCCCCCCCHHH
Confidence            99999999873     346789999999999999999999997655433

Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,

>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6

Probab=99.94  E-value=3.3e-27  Score=194.00  Aligned_cols=147  Identities=27%  Similarity=0.504  Sum_probs=109.5

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCC---CCccccCC
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD---QNYIVSTR   77 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~---~~~~~~t~   77 (252)
                      ||+|||++||+||||+|+||+++.                           .+.++|+|||.+......   .....++.
T Consensus       129 ~L~~LH~~~ivH~dl~p~Nill~~---------------------------~~~~kL~dfg~~~~~~~~~~~~~~~~~~~  181 (297)
T cd06659         129 ALCYLHSQGVIHRDIKSDSILLTL---------------------------DGRVKLSDFGFCAQISKDVPKRKSLVGTP  181 (297)
T ss_pred             HHHHHHhCCeecCCCCHHHeEEcc---------------------------CCcEEEeechhHhhcccccccccceecCc
Confidence            689999999999999999999954                           345677777766432221   12246788


Q ss_pred             CcccchhhhcCCCCccchhHhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHHHHHHhhcCCCCCCc
Q 025467           78 HYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPE  157 (252)
Q Consensus        78 ~y~aPE~l~~~~~~~~~Diws~G~~l~~l~~g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~  157 (252)
                      .|+|||++.+..++.++|+||+||+++++++|..||...+....+..+.   +..+.                    .  
T Consensus       182 ~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~---~~~~~--------------------~--  236 (297)
T cd06659         182 YWMAPEVISRTPYGTEVDIWSLGIMVIEMVDGEPPYFSDSPVQAMKRLR---DSPPP--------------------K--  236 (297)
T ss_pred             cccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHh---ccCCC--------------------C--
Confidence            9999999988888999999999999999999999997655433322211   10000                    0  


Q ss_pred             cccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCCCCCHH
Q 025467          158 GAASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAR  237 (252)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~ta~  237 (252)
                                                                        .......+..+.++|.+||+.+|.+|||++
T Consensus       237 --------------------------------------------------~~~~~~~~~~l~~~i~~~l~~~P~~Rps~~  266 (297)
T cd06659         237 --------------------------------------------------LKNAHKISPVLRDFLERMLTREPQERATAQ  266 (297)
T ss_pred             --------------------------------------------------ccccCCCCHHHHHHHHHHhcCCcccCcCHH
Confidence                                                              000122345789999999999999999999


Q ss_pred             HHHcCCCCCCcc
Q 025467          238 EALRHPFFTRDH  249 (252)
Q Consensus       238 e~l~hpwf~~~~  249 (252)
                      ++++||||.+..
T Consensus       267 ~ll~~~~~~~~~  278 (297)
T cd06659         267 ELLDHPFLLQTG  278 (297)
T ss_pred             HHhhChhhccCC
Confidence            999999998764

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i

>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase

Probab=99.94  E-value=4.7e-27  Score=191.97  Aligned_cols=147  Identities=30%  Similarity=0.523  Sum_probs=107.2

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCC---CCccccCC
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD---QNYIVSTR   77 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~---~~~~~~t~   77 (252)
                      ||+|||++||+||||+|+||+++.++                           .++++|||.+......   .....|+.
T Consensus       127 ~l~~lH~~~i~H~dl~p~Nil~~~~~---------------------------~~~l~d~g~~~~~~~~~~~~~~~~~~~  179 (285)
T cd06648         127 ALSFLHAQGVIHRDIKSDSILLTSDG---------------------------RVKLSDFGFCAQVSKEVPRRKSLVGTP  179 (285)
T ss_pred             HHHHHHhCCeecCCCChhhEEEcCCC---------------------------cEEEcccccchhhccCCcccccccCCc
Confidence            68999999999999999999995444                           4566666654432211   11235788


Q ss_pred             CcccchhhhcCCCCccchhHhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHHHHHHhhcCCCCCCc
Q 025467           78 HYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPE  157 (252)
Q Consensus        78 ~y~aPE~l~~~~~~~~~Diws~G~~l~~l~~g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~  157 (252)
                      .|+|||.+.+..++.++|+||+||+++++++|..||...+.......+...   .+                   . .. 
T Consensus       180 ~y~aPE~~~~~~~~~~~Dv~slGv~l~ell~g~~p~~~~~~~~~~~~~~~~---~~-------------------~-~~-  235 (285)
T cd06648         180 YWMAPEVISRLPYGTEVDIWSLGIMVIEMVDGEPPYFNEPPLQAMKRIRDN---LP-------------------P-KL-  235 (285)
T ss_pred             cccCHHHhcCCCCCCcccHHHHHHHHHHHHhCCCCCcCCCHHHHHHHHHhc---CC-------------------C-CC-
Confidence            999999998888899999999999999999999999764433322221110   00                   0 00 


Q ss_pred             cccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCCCCCHH
Q 025467          158 GAASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAR  237 (252)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~ta~  237 (252)
                                                                         ......+..+.+|+.+||+.+|++|||+.
T Consensus       236 ---------------------------------------------------~~~~~~~~~l~~li~~~l~~~p~~Rpt~~  264 (285)
T cd06648         236 ---------------------------------------------------KNLHKVSPRLRSFLDRMLVRDPAQRATAA  264 (285)
T ss_pred             ---------------------------------------------------cccccCCHHHHHHHHHHcccChhhCcCHH
Confidence                                                               00112446889999999999999999999


Q ss_pred             HHHcCCCCCCcc
Q 025467          238 EALRHPFFTRDH  249 (252)
Q Consensus       238 e~l~hpwf~~~~  249 (252)
                      ++++||||+...
T Consensus       265 ~il~~~~~~~~~  276 (285)
T cd06648         265 ELLNHPFLAKAG  276 (285)
T ss_pred             HHccCcccccCC
Confidence            999999997653

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun

>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein

Probab=99.94  E-value=8.1e-27  Score=193.02  Aligned_cols=188  Identities=21%  Similarity=0.304  Sum_probs=110.8

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCCCccccCCCcc
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYR   80 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~~~~~~t~~y~   80 (252)
                      ||+|||+++|+||||||+||+++.++.+++.||+.+.........                 ............++..|+
T Consensus       113 ~L~~LH~~~ivH~dlk~~Nili~~~~~~kl~d~~~~~~~~~~~~~-----------------~~~~~~~~~~~~~~~~y~  175 (314)
T cd08216         113 ALDYIHSKGFIHRSVKASHILLSGDGKVVLSGLRYSVSMIKHGKR-----------------QRVVHDFPKSSVKNLPWL  175 (314)
T ss_pred             HHHHHHHCCeecCCCCcceEEEecCCceEEecCccceeecccccc-----------------cccccccccccccccccc
Confidence            689999999999999999999977776666666544322110000                 000000111234677899


Q ss_pred             cchhhhcC--CCCccchhHhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHHHHHHhhcCCCCCCcc
Q 025467           81 APEVILGL--GWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEG  158 (252)
Q Consensus        81 aPE~l~~~--~~~~~~Diws~G~~l~~l~~g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~  158 (252)
                      |||++...  .++.++|+||+||+++++++|..||.........  +....+..+..+.            ..  ..+..
T Consensus       176 aPE~~~~~~~~~~~~~Diws~G~il~el~~g~~pf~~~~~~~~~--~~~~~~~~~~~~~------------~~--~~~~~  239 (314)
T cd08216         176 SPEVLQQNLQGYNEKSDIYSVGITACELANGHVPFKDMPATQML--LEKVRGTVPCLLD------------KS--TYPLY  239 (314)
T ss_pred             CHHHhcCCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHH--HHHHhccCccccc------------cC--chhhh
Confidence            99998763  5789999999999999999999999865433221  2222332221100            00  00000


Q ss_pred             ccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCCCCCHHH
Q 025467          159 AASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTARE  238 (252)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~ta~e  238 (252)
                      ...   ...    ..          .....       ..    .............+.++.+|+.+||++||++|||+++
T Consensus       240 ~~~---~~~----~~----------~~~~~-------~~----~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~  291 (314)
T cd08216         240 EDS---MSQ----SR----------SSNEH-------PN----NRDSVDHPYTRTFSEHFHQFVELCLQRDPESRPSASQ  291 (314)
T ss_pred             cCC---cCc----cc----------ccccc-------cc----hhhhhhcchhhHHHHHHHHHHHHHhhcCCCcCcCHHH
Confidence            000   000    00          00000       00    0000001111234568999999999999999999999


Q ss_pred             HHcCCCCCCcc
Q 025467          239 ALRHPFFTRDH  249 (252)
Q Consensus       239 ~l~hpwf~~~~  249 (252)
                      +|+||||+...
T Consensus       292 ll~~p~~~~~~  302 (314)
T cd08216         292 LLNHSFFKQCK  302 (314)
T ss_pred             HhcCchHhhhc
Confidence            99999998763

Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc

>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3

Probab=99.94  E-value=4.9e-27  Score=196.35  Aligned_cols=90  Identities=27%  Similarity=0.426  Sum_probs=70.7

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCC-----Ccccc
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ-----NYIVS   75 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~-----~~~~~   75 (252)
                      ||+|||+.||+||||||+|||++.++                           .++|+|||+++......     ....+
T Consensus       186 aL~~LH~~~ivHrDiKp~Nil~~~~~---------------------------~~kl~DfG~a~~~~~~~~~~~~~~~~~  238 (338)
T cd05102         186 GMEFLASRKCIHRDLAARNILLSENN---------------------------VVKICDFGLARDIYKDPDYVRKGSARL  238 (338)
T ss_pred             HHHHHHHCCEECCCCccceEEEcCCC---------------------------cEEEeecccccccccCcchhcccCCCC
Confidence            68999999999999999999995444                           45666666664322111     11234


Q ss_pred             CCCcccchhhhcCCCCccchhHhHHHHHHHHHh-CCCCCCCCC
Q 025467           76 TRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHE  117 (252)
Q Consensus        76 t~~y~aPE~l~~~~~~~~~Diws~G~~l~~l~~-g~~pf~~~~  117 (252)
                      +..|+|||++.+..++.++||||+||++|++++ |..||.+..
T Consensus       239 ~~~y~aPE~~~~~~~~~~sDiwslG~il~el~~~g~~pf~~~~  281 (338)
T cd05102         239 PLKWMAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQ  281 (338)
T ss_pred             CccccCcHHhhcCCCCcccCHHHHHHHHHHHHhCCCCCCCCCC
Confidence            678999999998889999999999999999997 999997643

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V

>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3

Probab=99.94  E-value=1.6e-27  Score=195.82  Aligned_cols=147  Identities=29%  Similarity=0.493  Sum_probs=106.9

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCC---CccccCC
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ---NYIVSTR   77 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~---~~~~~t~   77 (252)
                      ||.|||+.||+||||||+||+++.++                           .++++|||.+.......   ....++.
T Consensus       127 ~L~~LH~~~i~H~dL~p~Nili~~~~---------------------------~~~l~Dfg~~~~~~~~~~~~~~~~~~~  179 (297)
T cd06656         127 ALDFLHSNQVIHRDIKSDNILLGMDG---------------------------SVKLTDFGFCAQITPEQSKRSTMVGTP  179 (297)
T ss_pred             HHHHHHHCCcccCCCCHHHEEECCCC---------------------------CEEECcCccceEccCCccCcCcccCCc
Confidence            58999999999999999999995444                           45666666654332211   1235778


Q ss_pred             CcccchhhhcCCCCccchhHhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHHHHHHhhcCCCCCCc
Q 025467           78 HYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPE  157 (252)
Q Consensus        78 ~y~aPE~l~~~~~~~~~Diws~G~~l~~l~~g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~  157 (252)
                      .|+|||.+.+..++.++|+||+||++|++++|..||.+.+.......+.. .+.++                   .    
T Consensus       180 ~y~aPE~~~~~~~~~~~Di~slGvil~~l~tg~~pf~~~~~~~~~~~~~~-~~~~~-------------------~----  235 (297)
T cd06656         180 YWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIAT-NGTPE-------------------L----  235 (297)
T ss_pred             cccCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcchheeeecc-CCCCC-------------------C----
Confidence            89999999888889999999999999999999999976443221110000 00000                   0    


Q ss_pred             cccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCCCCCHH
Q 025467          158 GAASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAR  237 (252)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~ta~  237 (252)
                                                                         ......+..+.+|+.+||..||++|||++
T Consensus       236 ---------------------------------------------------~~~~~~~~~~~~li~~~l~~~p~~Rps~~  264 (297)
T cd06656         236 ---------------------------------------------------QNPERLSAVFRDFLNRCLEMDVDRRGSAK  264 (297)
T ss_pred             ---------------------------------------------------CCccccCHHHHHHHHHHccCChhhCcCHH
Confidence                                                               00122345788999999999999999999


Q ss_pred             HHHcCCCCCCcc
Q 025467          238 EALRHPFFTRDH  249 (252)
Q Consensus       238 e~l~hpwf~~~~  249 (252)
                      ++++||||....
T Consensus       265 ~il~~~~~~~~~  276 (297)
T cd06656         265 ELLQHPFLKLAK  276 (297)
T ss_pred             HHhcCchhcccc
Confidence            999999998654

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4

Probab=99.94  E-value=5.6e-27  Score=189.33  Aligned_cols=143  Identities=30%  Similarity=0.504  Sum_probs=104.1

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCC---------CCC
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERP---------DQN   71 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~---------~~~   71 (252)
                      ||+|||+.+|+|+||+|+||++..++.                           ++++|||.+.....         ...
T Consensus       114 ~l~~lH~~~i~H~dl~p~nil~~~~~~---------------------------~~l~dfg~~~~~~~~~~~~~~~~~~~  166 (265)
T cd06631         114 GVAYLHNNCVVHRDIKGNNVMLMPNGI---------------------------IKLIDFGCARRLAWVGLHGTHSNMLK  166 (265)
T ss_pred             HHHHHHhCCcccCCcCHHhEEECCCCe---------------------------EEeccchhhHhhhhcccccccccccc
Confidence            589999999999999999999965544                           45555554432110         111


Q ss_pred             ccccCCCcccchhhhcCCCCccchhHhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHHHHHHhhcC
Q 025467           72 YIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRG  151 (252)
Q Consensus        72 ~~~~t~~y~aPE~l~~~~~~~~~Diws~G~~l~~l~~g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~  151 (252)
                      ...++..|+|||++.+..++.++|+||+||+++++++|..||...+.......+....+..|                  
T Consensus       167 ~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~------------------  228 (265)
T cd06631         167 SMHGTPYWMAPEVINESGYGRKSDIWSIGCTVFEMATGKPPLASMDRLAAMFYIGAHRGLMP------------------  228 (265)
T ss_pred             ccCCCccccChhhhcCCCCcchhhHHHHHHHHHHHHhCCCccccCChHHHHHHhhhccCCCC------------------
Confidence            23578889999999888889999999999999999999999976543322221111111100                  


Q ss_pred             CCCCCccccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCC
Q 025467          152 RLDWPEGAASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPT  231 (252)
Q Consensus       152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~  231 (252)
                                                                               ......+.++.+++.+||..+|.
T Consensus       229 ---------------------------------------------------------~~~~~~~~~~~~~i~~~l~~~p~  251 (265)
T cd06631         229 ---------------------------------------------------------RLPDSFSAAAIDFVTSCLTRDQH  251 (265)
T ss_pred             ---------------------------------------------------------CCCCCCCHHHHHHHHHHhcCCcc
Confidence                                                                     00122456889999999999999


Q ss_pred             CCCCHHHHHcCCCC
Q 025467          232 DRLTAREALRHPFF  245 (252)
Q Consensus       232 ~R~ta~e~l~hpwf  245 (252)
                      +|||+.+++.||||
T Consensus       252 ~Rp~~~~~l~~~~~  265 (265)
T cd06631         252 ERPSALQLLRHDFL  265 (265)
T ss_pred             cCCCHHHHhcCCCC
Confidence            99999999999998

Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.

>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase

Probab=99.94  E-value=5.1e-27  Score=192.32  Aligned_cols=148  Identities=28%  Similarity=0.472  Sum_probs=105.2

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCC---CCccccCC
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD---QNYIVSTR   77 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~---~~~~~~t~   77 (252)
                      ||+|||++||+||||||+||+++.+                           +.++|+|||.+......   .....++.
T Consensus       122 ~l~~lH~~~i~H~dlkp~Nili~~~---------------------------~~~kl~dfg~~~~~~~~~~~~~~~~~~~  174 (292)
T cd06644         122 ALQYLHSMKIIHRDLKAGNVLLTLD---------------------------GDIKLADFGVSAKNVKTLQRRDSFIGTP  174 (292)
T ss_pred             HHHHHhcCCeeecCCCcceEEEcCC---------------------------CCEEEccCccceeccccccccceecCCc
Confidence            5889999999999999999999544                           34666777665432211   11235778


Q ss_pred             Ccccchhhhc-----CCCCccchhHhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHHHHHHhhcCC
Q 025467           78 HYRAPEVILG-----LGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGR  152 (252)
Q Consensus        78 ~y~aPE~l~~-----~~~~~~~Diws~G~~l~~l~~g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~  152 (252)
                      .|+|||++.+     ..++.++|+||+||++|++++|..||...+.......+..  +..|.                  
T Consensus       175 ~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~--~~~~~------------------  234 (292)
T cd06644         175 YWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAK--SEPPT------------------  234 (292)
T ss_pred             cccCceeeccccccCCCCCchhhhHhHHHHHHHHhcCCCCCccccHHHHHHHHhc--CCCcc------------------
Confidence            8999999853     3467889999999999999999999976543322221110  00000                  


Q ss_pred             CCCCccccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCC
Q 025467          153 LDWPEGAASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTD  232 (252)
Q Consensus       153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~  232 (252)
                      .                                                       ......+.++.+++.+||..||++
T Consensus       235 ~-------------------------------------------------------~~~~~~~~~~~~li~~~l~~~p~~  259 (292)
T cd06644         235 L-------------------------------------------------------SQPSKWSMEFRDFLKTALDKHPET  259 (292)
T ss_pred             C-------------------------------------------------------CCCcccCHHHHHHHHHHhcCCccc
Confidence            0                                                       001123457899999999999999


Q ss_pred             CCCHHHHHcCCCCCCccc
Q 025467          233 RLTAREALRHPFFTRDHL  250 (252)
Q Consensus       233 R~ta~e~l~hpwf~~~~~  250 (252)
                      |||++++++||||.....
T Consensus       260 Rp~~~~il~~~~~~~~~~  277 (292)
T cd06644         260 RPSAAQLLEHPFVSSVTS  277 (292)
T ss_pred             CcCHHHHhcCcccccccc
Confidence            999999999999987543

Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.

>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2

Probab=99.94  E-value=5e-27  Score=188.50  Aligned_cols=143  Identities=26%  Similarity=0.456  Sum_probs=104.3

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCC---CccccCC
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ---NYIVSTR   77 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~---~~~~~t~   77 (252)
                      ||+|||+.+|+|+||+|+||+++.++                           .++++|||.+.......   ....++.
T Consensus       111 ~l~~lh~~~i~H~dl~~~ni~~~~~~---------------------------~~~l~dfg~~~~~~~~~~~~~~~~~~~  163 (256)
T cd06612         111 GLEYLHSNKKIHRDIKAGNILLNEEG---------------------------QAKLADFGVSGQLTDTMAKRNTVIGTP  163 (256)
T ss_pred             HHHHHHHCCcccCCCCcceEEECCCC---------------------------cEEEcccccchhcccCccccccccCCc
Confidence            58999999999999999999995443                           46667776665432221   2235778


Q ss_pred             CcccchhhhcCCCCccchhHhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHHHHHHhhcCCCCCCc
Q 025467           78 HYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPE  157 (252)
Q Consensus        78 ~y~aPE~l~~~~~~~~~Diws~G~~l~~l~~g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~  157 (252)
                      .|+|||.+.+..++.++||||+||+++++++|..||...........+   ....                    .   .
T Consensus       164 ~y~~PE~~~~~~~~~~~Di~s~G~il~~l~~g~~p~~~~~~~~~~~~~---~~~~--------------------~---~  217 (256)
T cd06612         164 FWMAPEVIQEIGYNNKADIWSLGITAIEMAEGKPPYSDIHPMRAIFMI---PNKP--------------------P---P  217 (256)
T ss_pred             cccCHHHHhcCCCCchhhHHHHHHHHHHHHhCCCCCCCcchhhhhhhh---ccCC--------------------C---C
Confidence            899999998888899999999999999999999999754332211100   0000                    0   0


Q ss_pred             cccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCCCCCHH
Q 025467          158 GAASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAR  237 (252)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~ta~  237 (252)
                      .                                                 .......+..+.+++.+||+.||.+|||++
T Consensus       218 ~-------------------------------------------------~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~  248 (256)
T cd06612         218 T-------------------------------------------------LSDPEKWSPEFNDFVKKCLVKDPEERPSAI  248 (256)
T ss_pred             C-------------------------------------------------CCchhhcCHHHHHHHHHHHhcChhhCcCHH
Confidence            0                                                 000112345789999999999999999999


Q ss_pred             HHHcCCCC
Q 025467          238 EALRHPFF  245 (252)
Q Consensus       238 e~l~hpwf  245 (252)
                      ++|+||||
T Consensus       249 ~il~~~~~  256 (256)
T cd06612         249 QLLQHPFI  256 (256)
T ss_pred             HHhcCCCC
Confidence            99999998

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a

>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin

Probab=99.94  E-value=6e-27  Score=191.78  Aligned_cols=144  Identities=28%  Similarity=0.493  Sum_probs=103.6

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCC---CCccccCC
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD---QNYIVSTR   77 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~---~~~~~~t~   77 (252)
                      ||+|||+.||+||||||+||+++.+                           ..++++|||.+......   .....++.
T Consensus       140 al~~lH~~~ivH~dlkp~nili~~~---------------------------~~~kl~dfg~~~~~~~~~~~~~~~~~~~  192 (291)
T cd06639         140 GLQHLHNNRIIHRDVKGNNILLTTE---------------------------GGVKLVDFGVSAQLTSTRLRRNTSVGTP  192 (291)
T ss_pred             HHHHHHhCCeeccCCCHHHEEEcCC---------------------------CCEEEeecccchhcccccccccCccCCc
Confidence            6899999999999999999999543                           34677777766543221   12235788


Q ss_pred             CcccchhhhcC-----CCCccchhHhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHHHHHHhhcCC
Q 025467           78 HYRAPEVILGL-----GWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGR  152 (252)
Q Consensus        78 ~y~aPE~l~~~-----~~~~~~Diws~G~~l~~l~~g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~  152 (252)
                      .|+|||++...     .++.++|+||+||++|++++|..||...+....+..+..  +..+                   
T Consensus       193 ~y~aPE~~~~~~~~~~~~~~~~Di~slGvi~~el~~g~~p~~~~~~~~~~~~~~~--~~~~-------------------  251 (291)
T cd06639         193 FWMAPEVIACEQQYDYSYDARCDVWSLGITAIELGDGDPPLFDMHPVKTLFKIPR--NPPP-------------------  251 (291)
T ss_pred             cccChhhhcCCCCcccccCCccchHHHHHHHHHHhhCCCCCCCCcHHHHHHHHhc--CCCC-------------------
Confidence            89999998643     267899999999999999999999976544332221110  0000                   


Q ss_pred             CCCCccccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCC
Q 025467          153 LDWPEGAASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTD  232 (252)
Q Consensus       153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~  232 (252)
                       ..                                                     .........+.+|+.+||+.||++
T Consensus       252 -~~-----------------------------------------------------~~~~~~~~~l~~li~~~l~~~p~~  277 (291)
T cd06639         252 -TL-----------------------------------------------------LHPEKWCRSFNHFISQCLIKDFEA  277 (291)
T ss_pred             -CC-----------------------------------------------------CcccccCHHHHHHHHHHhhcChhh
Confidence             00                                                     000112347899999999999999


Q ss_pred             CCCHHHHHcCCCCC
Q 025467          233 RLTAREALRHPFFT  246 (252)
Q Consensus       233 R~ta~e~l~hpwf~  246 (252)
                      |||+.++++||||+
T Consensus       278 Rps~~~il~~~~~~  291 (291)
T cd06639         278 RPSVTHLLEHPFIK  291 (291)
T ss_pred             CcCHHHHhcCcccC
Confidence            99999999999995

Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre

>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains

Probab=99.94  E-value=1.1e-26  Score=186.55  Aligned_cols=141  Identities=26%  Similarity=0.431  Sum_probs=105.2

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCC---CccccCC
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ---NYIVSTR   77 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~---~~~~~t~   77 (252)
                      ||.|||+.|++|+||+|+||+++.++                           .++++|||.+.......   ....++.
T Consensus       113 al~~lH~~~i~h~dl~~~nili~~~~---------------------------~~~l~df~~~~~~~~~~~~~~~~~~~~  165 (256)
T cd08529         113 GLAHLHSKKILHRDIKSLNLFLDAYD---------------------------NVKIGDLGVAKLLSDNTNFANTIVGTP  165 (256)
T ss_pred             HHHHHHHCCcccCCCCcceEEEeCCC---------------------------CEEEcccccceeccCccchhhccccCc
Confidence            68999999999999999999995544                           45666666554332221   1235778


Q ss_pred             CcccchhhhcCCCCccchhHhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHHHHHHhhcCCCCCCc
Q 025467           78 HYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPE  157 (252)
Q Consensus        78 ~y~aPE~l~~~~~~~~~Diws~G~~l~~l~~g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~  157 (252)
                      .|+|||++.+..++.++|+||+||+++++++|..||...+.......+..  +..+                        
T Consensus       166 ~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~--~~~~------------------------  219 (256)
T cd08529         166 YYLSPELCEDKPYNEKSDVWALGVVLYECCTGKHPFDANNQGALILKIIR--GVFP------------------------  219 (256)
T ss_pred             cccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHc--CCCC------------------------
Confidence            89999999988889999999999999999999999976654332222111  0000                        


Q ss_pred             cccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCCCCCHH
Q 025467          158 GAASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAR  237 (252)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~ta~  237 (252)
                                                                         ......+..+.+++.+||+.+|++||++.
T Consensus       220 ---------------------------------------------------~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~  248 (256)
T cd08529         220 ---------------------------------------------------PVSQMYSQQLAQLIDQCLTKDYRQRPDTF  248 (256)
T ss_pred             ---------------------------------------------------CCccccCHHHHHHHHHHccCCcccCcCHH
Confidence                                                               00012345889999999999999999999


Q ss_pred             HHHcCCCC
Q 025467          238 EALRHPFF  245 (252)
Q Consensus       238 e~l~hpwf  245 (252)
                      ++++|||.
T Consensus       249 ~ll~~~~~  256 (256)
T cd08529         249 QLLRNPSL  256 (256)
T ss_pred             HHhhCCCC
Confidence            99999995

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc

>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3

Probab=99.94  E-value=4.7e-27  Score=189.99  Aligned_cols=90  Identities=30%  Similarity=0.533  Sum_probs=71.0

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCC------CCCccc
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERP------DQNYIV   74 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~------~~~~~~   74 (252)
                      ||+|||+++|+||||+|+||+++.++                           .++|+|||++.....      ......
T Consensus       118 ~l~~LH~~~i~H~~l~p~nil~~~~~---------------------------~~~l~dfg~~~~~~~~~~~~~~~~~~~  170 (266)
T cd06651         118 GMSYLHSNMIVHRDIKGANILRDSAG---------------------------NVKLGDFGASKRLQTICMSGTGIRSVT  170 (266)
T ss_pred             HHHHHHhCCeeeCCCCHHHEEECCCC---------------------------CEEEccCCCccccccccccCCccccCC
Confidence            58999999999999999999995444                           456666665543211      111235


Q ss_pred             cCCCcccchhhhcCCCCccchhHhHHHHHHHHHhCCCCCCCCC
Q 025467           75 STRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHE  117 (252)
Q Consensus        75 ~t~~y~aPE~l~~~~~~~~~Diws~G~~l~~l~~g~~pf~~~~  117 (252)
                      ++..|+|||.+.+..++.++|+||+||++|++++|..||....
T Consensus       171 ~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~el~~g~~pf~~~~  213 (266)
T cd06651         171 GTPYWMSPEVISGEGYGRKADVWSLGCTVVEMLTEKPPWAEYE  213 (266)
T ss_pred             ccccccCHHHhCCCCCCchhhhHHHHHHHHHHHHCCCCccccc
Confidence            7788999999988888999999999999999999999997543

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development

>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12

Probab=99.94  E-value=8.8e-27  Score=191.67  Aligned_cols=170  Identities=29%  Similarity=0.459  Sum_probs=115.4

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCC----CccccC
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ----NYIVST   76 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~----~~~~~t   76 (252)
                      ||+|||++||+|+||||+||+++..+                           .++|+|||.+.......    ....++
T Consensus       128 aL~~LH~~~i~H~dl~p~nili~~~~---------------------------~~kl~dfg~~~~~~~~~~~~~~~~~~~  180 (302)
T cd07864         128 GLNYCHKKNFLHRDIKCSNILLNNKG---------------------------QIKLADFGLARLYNSEESRPYTNKVIT  180 (302)
T ss_pred             HHHHHHhCCeecCCCCHHHEEECCCC---------------------------cEEeCcccccccccCCcccccccceec
Confidence            68999999999999999999995544                           45666666554332211    112456


Q ss_pred             CCcccchhhhcC-CCCccchhHhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHHHHHHhhcCCCCC
Q 025467           77 RHYRAPEVILGL-GWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDW  155 (252)
Q Consensus        77 ~~y~aPE~l~~~-~~~~~~Diws~G~~l~~l~~g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~  155 (252)
                      ..|+|||.+.+. .++.++||||+||+++++++|++||...+....+..+.+..+..+...+..+.........+.    
T Consensus       181 ~~y~~PE~~~~~~~~~~~~Di~slG~~~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----  256 (302)
T cd07864         181 LWYRPPELLLGEERYGPAIDVWSCGCILGELFTKKPIFQANQELAQLELISRLCGSPCPAVWPDVIKLPYFNTMKP----  256 (302)
T ss_pred             cCccChHHhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChhhccccccccccccccc----
Confidence            789999988654 468899999999999999999999988777777777777766554432211110000000000    


Q ss_pred             CccccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCCCCC
Q 025467          156 PEGAASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLT  235 (252)
Q Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~t  235 (252)
                      .               +.                             ............+..+.+++.+||..||.+|||
T Consensus       257 ~---------------~~-----------------------------~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~  292 (302)
T cd07864         257 K---------------KQ-----------------------------YRRRLREEFSFIPTPALDLLDHMLTLDPSKRCT  292 (302)
T ss_pred             c---------------cc-----------------------------cccchhhhcCCCCHHHHHHHHHHccCChhhCCC
Confidence            0               00                             000000111234678999999999999999999


Q ss_pred             HHHHHcCCCC
Q 025467          236 AREALRHPFF  245 (252)
Q Consensus       236 a~e~l~hpwf  245 (252)
                      +++++.||||
T Consensus       293 ~~~il~~~~~  302 (302)
T cd07864         293 AEEALNSPWL  302 (302)
T ss_pred             HHHHhcCCCC
Confidence            9999999997

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely

>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase

Probab=99.94  E-value=4.6e-27  Score=189.77  Aligned_cols=146  Identities=29%  Similarity=0.486  Sum_probs=104.6

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCC-------Ccc
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ-------NYI   73 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~-------~~~   73 (252)
                      ||+|||++||+|+||+|+||+++.++                           .++++|||.+.......       ...
T Consensus       114 al~~lh~~~i~h~~l~p~ni~~~~~~---------------------------~~~l~df~~~~~~~~~~~~~~~~~~~~  166 (267)
T cd06610         114 GLEYLHSNGQIHRDIKAGNILLGEDG---------------------------SVKIADFGVSASLADGGDRTRKVRKTF  166 (267)
T ss_pred             HHHHHHhCCeecCCCCHHhEEEcCCC---------------------------CEEEcccchHHHhccCccccccccccc
Confidence            68999999999999999999995444                           45666666554322211       223


Q ss_pred             ccCCCcccchhhhcC-CCCccchhHhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHHHHHHhhcCC
Q 025467           74 VSTRHYRAPEVILGL-GWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGR  152 (252)
Q Consensus        74 ~~t~~y~aPE~l~~~-~~~~~~Diws~G~~l~~l~~g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~  152 (252)
                      .++..|++||++... .++.++|+||+||+++++++|..||...+..........   ..+                   
T Consensus       167 ~~~~~y~~Pe~~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~---~~~-------------------  224 (267)
T cd06610         167 VGTPCWMAPEVMEQVHGYDFKADIWSFGITAIELATGAAPYSKYPPMKVLMLTLQ---NDP-------------------  224 (267)
T ss_pred             cCChhhcChHHHccccCcCcccchHhHhHHHHHHHhCCCCccccChhhhHHHHhc---CCC-------------------
Confidence            578889999998876 688999999999999999999999975543322211110   000                   


Q ss_pred             CCCCccccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCC
Q 025467          153 LDWPEGAASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTD  232 (252)
Q Consensus       153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~  232 (252)
                      ...+..                                                  ......+.++.+++.+||+.||++
T Consensus       225 ~~~~~~--------------------------------------------------~~~~~~~~~~~~li~~~l~~~p~~  254 (267)
T cd06610         225 PSLETG--------------------------------------------------ADYKKYSKSFRKMISLCLQKDPSK  254 (267)
T ss_pred             CCcCCc--------------------------------------------------cccccccHHHHHHHHHHcCCChhh
Confidence            000000                                                  001234568899999999999999


Q ss_pred             CCCHHHHHcCCCC
Q 025467          233 RLTAREALRHPFF  245 (252)
Q Consensus       233 R~ta~e~l~hpwf  245 (252)
                      |||++++++||||
T Consensus       255 Rp~~~~ll~~p~~  267 (267)
T cd06610         255 RPTAEELLKHKFF  267 (267)
T ss_pred             CcCHHHHhhCCCC
Confidence            9999999999998

Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1

>KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms]

Probab=99.94  E-value=1.2e-28  Score=205.18  Aligned_cols=148  Identities=28%  Similarity=0.481  Sum_probs=120.2

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCC--CCccccCCC
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD--QNYIVSTRH   78 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~--~~~~~~t~~   78 (252)
                      ||+|||-+||||+||||+|||+...                        ..-..+||||||.|+.....  ....+||+.
T Consensus       676 ALr~LH~knIvHCDLKPENVLLas~------------------------~~FPQvKlCDFGfARiIgEksFRrsVVGTPA  731 (888)
T KOG4236|consen  676 ALRYLHFKNIVHCDLKPENVLLASA------------------------SPFPQVKLCDFGFARIIGEKSFRRSVVGTPA  731 (888)
T ss_pred             HHHHhhhcceeeccCCchheeeccC------------------------CCCCceeeccccceeecchhhhhhhhcCCcc
Confidence            7999999999999999999999653                        23345799999999876554  345799999


Q ss_pred             cccchhhhcCCCCccchhHhHHHHHHHHHhCCCCCCCCChH-HHHHHHHHHhCCCchHHHHHhhHHHHHHhhcCCCCCCc
Q 025467           79 YRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENL-EHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPE  157 (252)
Q Consensus        79 y~aPE~l~~~~~~~~~Diws~G~~l~~l~~g~~pf~~~~~~-~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~  157 (252)
                      |.|||++...+|+...||||+|||+|..++|..||..+++. ++++.                          ..+-+| 
T Consensus       732 YLaPEVLrnkGyNrSLDMWSVGVIiYVsLSGTFPFNEdEdIndQIQN--------------------------AaFMyP-  784 (888)
T KOG4236|consen  732 YLAPEVLRNKGYNRSLDMWSVGVIIYVSLSGTFPFNEDEDINDQIQN--------------------------AAFMYP-  784 (888)
T ss_pred             ccCHHHHhhccccccccceeeeEEEEEEecccccCCCccchhHHhhc--------------------------cccccC-
Confidence            99999999999999999999999999999999999754431 22221                          111122 


Q ss_pred             cccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCCCCCHH
Q 025467          158 GAASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAR  237 (252)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~ta~  237 (252)
                                                                        ...|.+++.++.|||.++|++.-++|.|.+
T Consensus       785 --------------------------------------------------p~PW~eis~~AidlIn~LLqVkm~kRysvd  814 (888)
T KOG4236|consen  785 --------------------------------------------------PNPWSEISPEAIDLINNLLQVKMRKRYSVD  814 (888)
T ss_pred             --------------------------------------------------CCchhhcCHHHHHHHHHHHHHHHHHhcchH
Confidence                                                              133566788999999999999999999999


Q ss_pred             HHHcCCCCCCcc
Q 025467          238 EALRHPFFTRDH  249 (252)
Q Consensus       238 e~l~hpwf~~~~  249 (252)
                      ..|.|||+++-+
T Consensus       815 k~lsh~Wlq~yq  826 (888)
T KOG4236|consen  815 KSLSHPWLQDYQ  826 (888)
T ss_pred             hhccchhhhcch
Confidence            999999998754

>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases

Probab=99.94  E-value=1.7e-26  Score=188.21  Aligned_cols=170  Identities=34%  Similarity=0.590  Sum_probs=119.4

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCC--CccccCCC
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ--NYIVSTRH   78 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~--~~~~~t~~   78 (252)
                      ||.|||++|++|+||+|.||+++.                           ...++|+|||.+.......  ....++..
T Consensus       111 ~l~~Lh~~~i~H~dl~~~ni~i~~---------------------------~~~~~l~d~~~~~~~~~~~~~~~~~~~~~  163 (283)
T cd07830         111 GLAHIHKHGFFHRDLKPENLLVSG---------------------------PEVVKIADFGLAREIRSRPPYTDYVSTRW  163 (283)
T ss_pred             HHHHHHHCCcccCCCChhhEEEcC---------------------------CCCEEEeecccceeccCCCCcCCCCCccc
Confidence            589999999999999999999944                           4456777777765433321  22357888


Q ss_pred             cccchhhhcC-CCCccchhHhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHHHHHHhhcCCCCCCc
Q 025467           79 YRAPEVILGL-GWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPE  157 (252)
Q Consensus        79 y~aPE~l~~~-~~~~~~Diws~G~~l~~l~~g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~  157 (252)
                      |+|||.+... .++.++|+||+|++++++++|..||......+....+...++.++...+.......    .......+.
T Consensus       164 ~~aPE~~~~~~~~~~~~Di~s~G~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~  239 (283)
T cd07830         164 YRAPEILLRSTSYSSPVDIWALGCIMAELYTLRPLFPGSSEIDQLYKICSVLGTPTKQDWPEGYKLA----SKLGFRFPQ  239 (283)
T ss_pred             ccCceeeecCcCcCCccchhhHHHHHHHHHhCCCccCCCChHHHHHHHHHhcCCCChhhhhhHhhhh----ccccccccc
Confidence            9999988543 57889999999999999999999998888888888888888876643321111000    000000000


Q ss_pred             cccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCCCCCHH
Q 025467          158 GAASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAR  237 (252)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~ta~  237 (252)
                      ..                                            ...........+..+.+|+.+||+.||++|||++
T Consensus       240 ~~--------------------------------------------~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~  275 (283)
T cd07830         240 FA--------------------------------------------PTSLHQLIPNASPEAIDLIKDMLRWDPKKRPTAS  275 (283)
T ss_pred             cc--------------------------------------------cccHHHHcccCCHHHHHHHHHhcccCcccCCCHH
Confidence            00                                            0000000112256899999999999999999999


Q ss_pred             HHHcCCCC
Q 025467          238 EALRHPFF  245 (252)
Q Consensus       238 e~l~hpwf  245 (252)
                      |++.||||
T Consensus       276 ei~~~~~~  283 (283)
T cd07830         276 QALQHPYF  283 (283)
T ss_pred             HHhhCCCC
Confidence            99999998

Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili

>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases

Probab=99.94  E-value=6.2e-27  Score=188.55  Aligned_cols=146  Identities=33%  Similarity=0.570  Sum_probs=108.6

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCCCccccCCCcc
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYR   80 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~~~~~~t~~y~   80 (252)
                      ||.|||+.|++|+||+|.||+++.                           ...++++|||.+...... ....++..|+
T Consensus       109 aL~~lH~~~i~H~dl~p~nil~~~---------------------------~~~~~l~dfg~~~~~~~~-~~~~~~~~y~  160 (260)
T cd05611         109 GVEDLHQRGIIHRDIKPENLLIDQ---------------------------TGHLKLTDFGLSRNGLEN-KKFVGTPDYL  160 (260)
T ss_pred             HHHHHHHCCeecCCCCHHHeEECC---------------------------CCcEEEeecccceecccc-ccCCCCcCcc
Confidence            689999999999999999999944                           345677777776543322 2235778899


Q ss_pred             cchhhhcCCCCccchhHhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHHHHHHhhcCCCCCCcccc
Q 025467           81 APEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAA  160 (252)
Q Consensus        81 aPE~l~~~~~~~~~Diws~G~~l~~l~~g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (252)
                      +||.+.+..++.++|+||+|+++|++++|..||...+.......+..                       +...++..  
T Consensus       161 ~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~-----------------------~~~~~~~~--  215 (260)
T cd05611         161 APETILGVGDDKMSDWWSLGCVIFEFLFGYPPFHAETPDAVFDNILS-----------------------RRINWPEE--  215 (260)
T ss_pred             ChhhhcCCCCcchhhhHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHh-----------------------cccCCCCc--
Confidence            99999887889999999999999999999999976554333222111                       00111100  


Q ss_pred             chhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCCCCCH---H
Q 025467          161 SRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTA---R  237 (252)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~ta---~  237 (252)
                                                                       .....+..+.+++.+||+.||++|||+   +
T Consensus       216 -------------------------------------------------~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~  246 (260)
T cd05611         216 -------------------------------------------------VKEFCSPEAVDLINRLLCMDPAKRLGANGYQ  246 (260)
T ss_pred             -------------------------------------------------ccccCCHHHHHHHHHHccCCHHHccCCCcHH
Confidence                                                             001245689999999999999999955   7


Q ss_pred             HHHcCCCCCCc
Q 025467          238 EALRHPFFTRD  248 (252)
Q Consensus       238 e~l~hpwf~~~  248 (252)
                      |++.||||++.
T Consensus       247 ~~l~~~~~~~~  257 (260)
T cd05611         247 EIKSHPFFKSI  257 (260)
T ss_pred             HHHcChHhhcC
Confidence            99999999875

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do

>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase

Probab=99.94  E-value=1.3e-26  Score=191.53  Aligned_cols=90  Identities=33%  Similarity=0.546  Sum_probs=71.4

Q ss_pred             Chhhhhc-cCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCC-CCccccCCC
Q 025467            1 MFAVMHD-LCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD-QNYIVSTRH   78 (252)
Q Consensus         1 aL~~lH~-~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~-~~~~~~t~~   78 (252)
                      ||+|||+ ++++|+||||+|||++.++                           .++++|||.+...... .....++..
T Consensus       111 ~l~~lH~~~~i~H~dl~p~nil~~~~~---------------------------~~~l~dfg~~~~~~~~~~~~~~~~~~  163 (308)
T cd06615         111 GLTYLREKHKIMHRDVKPSNILVNSRG---------------------------EIKLCDFGVSGQLIDSMANSFVGTRS  163 (308)
T ss_pred             HHHHHHhhCCEEECCCChHHEEEecCC---------------------------cEEEccCCCcccccccccccCCCCcC
Confidence            6899997 6999999999999995544                           4566666665432211 123467889


Q ss_pred             cccchhhhcCCCCccchhHhHHHHHHHHHhCCCCCCCCC
Q 025467           79 YRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHE  117 (252)
Q Consensus        79 y~aPE~l~~~~~~~~~Diws~G~~l~~l~~g~~pf~~~~  117 (252)
                      |+|||++.+..++.++|+||+||+++++++|..||...+
T Consensus       164 ~~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~p~~~~~  202 (308)
T cd06615         164 YMSPERLQGTHYTVQSDIWSLGLSLVEMAIGRYPIPPPD  202 (308)
T ss_pred             ccChhHhcCCCCCccchHHHHHHHHHHHHhCCCCCCCcc
Confidence            999999988788899999999999999999999997654

Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down

>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase

Probab=99.94  E-value=8.4e-27  Score=188.00  Aligned_cols=145  Identities=33%  Similarity=0.606  Sum_probs=108.3

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCC--CCccccCCC
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD--QNYIVSTRH   78 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~--~~~~~~t~~   78 (252)
                      ||+|||++|++|+||+|+||+++.                           ...++|+|||.+......  .....++..
T Consensus       105 ~l~~lH~~~~~h~dl~~~nilv~~---------------------------~~~~~l~df~~~~~~~~~~~~~~~~~~~~  157 (262)
T cd05572         105 AFEYLHNRGIIYRDLKPENLLLDS---------------------------NGYVKLVDFGFAKKLKSGQKTWTFCGTPE  157 (262)
T ss_pred             HHHHHhhCCcccCCCCHHHEEEcC---------------------------CCCEEEeeCCcccccCcccccccccCCcC
Confidence            689999999999999999999954                           345677777776544332  122367888


Q ss_pred             cccchhhhcCCCCccchhHhHHHHHHHHHhCCCCCCCCCh--HHHHHHHHHHhCCCchHHHHHhhHHHHHHhhcCCCCCC
Q 025467           79 YRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHEN--LEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWP  156 (252)
Q Consensus        79 y~aPE~l~~~~~~~~~Diws~G~~l~~l~~g~~pf~~~~~--~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~  156 (252)
                      |++||.+....++.++|+||+|+++|++++|..||.....  ......+..  +                   ......+
T Consensus       158 ~~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~--~-------------------~~~~~~~  216 (262)
T cd05572         158 YVAPEIILNKGYDFSVDYWSLGILLYELLTGRPPFGEDDEDPMEIYNDILK--G-------------------NGKLEFP  216 (262)
T ss_pred             ccChhHhcCCCCCChhhhhhhHHHHHHHHhCCCCcCCCCCCHHHHHHHHhc--c-------------------CCCCCCC
Confidence            9999999888889999999999999999999999976552  111111110  0                   0001011


Q ss_pred             ccccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCCCCC-
Q 025467          157 EGAASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLT-  235 (252)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~t-  235 (252)
                                                                             ...+.++.++|.+||..||++|+| 
T Consensus       217 -------------------------------------------------------~~~~~~~~~~i~~~l~~~p~~R~~~  241 (262)
T cd05572         217 -------------------------------------------------------NYIDKAAKDLIKQLLRRNPEERLGN  241 (262)
T ss_pred             -------------------------------------------------------cccCHHHHHHHHHHccCChhhCcCC
Confidence                                                                   112468899999999999999999 


Q ss_pred             ----HHHHHcCCCCCCc
Q 025467          236 ----AREALRHPFFTRD  248 (252)
Q Consensus       236 ----a~e~l~hpwf~~~  248 (252)
                          ++|+++||||+..
T Consensus       242 ~~~~~~~l~~~~~~~~~  258 (262)
T cd05572         242 LKGGIKDIKKHKWFNGF  258 (262)
T ss_pred             cccCHHHHhcChhhhCC
Confidence                9999999999875

Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi

>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases

Probab=99.94  E-value=1.4e-26  Score=189.04  Aligned_cols=148  Identities=23%  Similarity=0.370  Sum_probs=106.8

Q ss_pred             Chhhhhc-cCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCC-CCCccccCCC
Q 025467            1 MFAVMHD-LCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERP-DQNYIVSTRH   78 (252)
Q Consensus         1 aL~~lH~-~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~-~~~~~~~t~~   78 (252)
                      ||.|||+ .||+|+||||+||+++.                           +..++++|||.+..... ......++..
T Consensus       114 ~l~~LH~~~~i~H~dl~p~nil~~~---------------------------~~~~~l~dfg~~~~~~~~~~~~~~~~~~  166 (286)
T cd06622         114 GLKFLKEEHNIIHRDVKPTNVLVNG---------------------------NGQVKLCDFGVSGNLVASLAKTNIGCQS  166 (286)
T ss_pred             HHHHHHhcCCEeeCCCCHHHEEECC---------------------------CCCEEEeecCCcccccCCccccCCCccC
Confidence            5889996 69999999999999944                           44577777777654322 2223457788


Q ss_pred             cccchhhhcC------CCCccchhHhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHHHHHHhhcCC
Q 025467           79 YRAPEVILGL------GWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGR  152 (252)
Q Consensus        79 y~aPE~l~~~------~~~~~~Diws~G~~l~~l~~g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~  152 (252)
                      |+|||.+.+.      .++.++|+||+||++|++++|..||...........+.......+                   
T Consensus       167 y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~-------------------  227 (286)
T cd06622         167 YMAPERIKSGGPNQNPTYTVQSDVWSLGLSILEMALGRYPYPPETYANIFAQLSAIVDGDP-------------------  227 (286)
T ss_pred             ccCcchhcCCCCCccCCCCcccchHhHHHHHHHHHhCCCCCCCcchhhHHHHHHHHhhcCC-------------------
Confidence            9999998653      247889999999999999999999975443332222222111100                   


Q ss_pred             CCCCccccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCC
Q 025467          153 LDWPEGAASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTD  232 (252)
Q Consensus       153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~  232 (252)
                      .                                                       ......+.++.+||.+||+.+|++
T Consensus       228 ~-------------------------------------------------------~~~~~~~~~~~~li~~~l~~~p~~  252 (286)
T cd06622         228 P-------------------------------------------------------TLPSGYSDDAQDFVAKCLNKIPNR  252 (286)
T ss_pred             C-------------------------------------------------------CCCcccCHHHHHHHHHHcccCccc
Confidence            0                                                       001224568899999999999999


Q ss_pred             CCCHHHHHcCCCCCCcc
Q 025467          233 RLTAREALRHPFFTRDH  249 (252)
Q Consensus       233 R~ta~e~l~hpwf~~~~  249 (252)
                      |||+++++.||||....
T Consensus       253 Rp~~~~l~~~~~~~~~~  269 (286)
T cd06622         253 RPTYAQLLEHPWLVKYK  269 (286)
T ss_pred             CCCHHHHhcChhhhhcc
Confidence            99999999999997654

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase

Probab=99.94  E-value=9.3e-27  Score=189.59  Aligned_cols=147  Identities=29%  Similarity=0.449  Sum_probs=105.5

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCC-CCCccccCCCc
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERP-DQNYIVSTRHY   79 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~-~~~~~~~t~~y   79 (252)
                      ||+|||+.+|+||||||+||+++.++                           .++++|||.+..... ......|+..|
T Consensus       109 ~l~~lH~~~i~H~di~p~nili~~~~---------------------------~~kl~dfg~~~~~~~~~~~~~~~~~~y  161 (278)
T cd05606         109 GLEHMHNRFVVYRDLKPANILLDEHG---------------------------HVRISDLGLACDFSKKKPHASVGTHGY  161 (278)
T ss_pred             HHHHHHHCCEEcCCCCHHHEEECCCC---------------------------CEEEccCcCccccCccCCcCcCCCcCC
Confidence            58999999999999999999995444                           466666666543221 11224688899


Q ss_pred             ccchhhhcC-CCCccchhHhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHHHHHHhhcCCCCCCcc
Q 025467           80 RAPEVILGL-GWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEG  158 (252)
Q Consensus        80 ~aPE~l~~~-~~~~~~Diws~G~~l~~l~~g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~  158 (252)
                      +|||++... .++.++|+||+||++|++++|..||...............                    .....     
T Consensus       162 ~aPE~~~~~~~~~~~~Di~s~G~~l~~l~~g~~p~~~~~~~~~~~~~~~~--------------------~~~~~-----  216 (278)
T cd05606         162 MAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMT--------------------LTMAV-----  216 (278)
T ss_pred             cCcHHhcCCCCCCcccchHhHHHHHHHHHhCCCCCCCCCccchHHHHHHh--------------------hccCC-----
Confidence            999999754 5789999999999999999999999754221110000000                    00000     


Q ss_pred             ccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCCCC----
Q 025467          159 AASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRL----  234 (252)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~----  234 (252)
                                                                        ......+.++.+++.+||..+|.+|+    
T Consensus       217 --------------------------------------------------~~~~~~s~~~~~li~~~l~~~p~~R~~~~~  246 (278)
T cd05606         217 --------------------------------------------------ELPDSFSPELRSLLEGLLQRDVNRRLGCLG  246 (278)
T ss_pred             --------------------------------------------------CCCCcCCHHHHHHHHHHhhcCHHhccCCCC
Confidence                                                              00122356899999999999999999    


Q ss_pred             -CHHHHHcCCCCCCcc
Q 025467          235 -TAREALRHPFFTRDH  249 (252)
Q Consensus       235 -ta~e~l~hpwf~~~~  249 (252)
                       |+.++++||||+...
T Consensus       247 ~~~~~ll~~~~~~~~~  262 (278)
T cd05606         247 RGAQEVKEHPFFRSLD  262 (278)
T ss_pred             CCHHHHHhCccccCCC
Confidence             999999999998753

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co

>KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair]

Probab=99.94  E-value=3.3e-27  Score=191.64  Aligned_cols=219  Identities=25%  Similarity=0.305  Sum_probs=128.9

Q ss_pred             ChhhhhccCccccCCCCCCeEeecC-CccccCCCccCCCCCCCC-----cc-----ccC-CCCC-CceEEee----cCCc
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSS-EYIKVPDYKSSLHTPKDS-----SY-----FKR-MPKS-SAIKVID----FGST   63 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~-~~~~~~d~~~~~~~~~~~-----~~-----~~~-~~~~-~~~~l~d----fg~~   63 (252)
                      ||+++|++|||||||||+|+|++.. +...+.|||++.......     ..     .+. +... ...++..    -|..
T Consensus       144 Al~~~h~~GIvHRDiKpsNFL~n~~t~rg~LvDFgLA~~~d~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~p~g~~  223 (418)
T KOG1167|consen  144 ALAHLHKNGIVHRDIKPSNFLYNRRTQRGVLVDFGLAQRYDGYQQTEHSRSYSGRHATPAMGKDVHCQSVATASKPAGYY  223 (418)
T ss_pred             HhhhhhccCccccCCCccccccccccCCceEEechhHHHHHhhhhhhhhhhhhcccCCccccCcccccccccccCCCCce
Confidence            7899999999999999999999865 789999999997311100     00     000 0000 0001100    0000


Q ss_pred             c---ccCCC-CCccccCCCcccchhhhcCC-CCccchhHhHHHHHHHHHhCCCCC-CCCChHHHHHHHHHHhCCCchHHH
Q 025467           64 T---YERPD-QNYIVSTRHYRAPEVILGLG-WTYPCDIWSVGCILVELCTGEALF-QTHENLEHLAMMERVLGPLPQHML  137 (252)
Q Consensus        64 ~---~~~~~-~~~~~~t~~y~aPE~l~~~~-~~~~~Diws~G~~l~~l~~g~~pf-~~~~~~~~~~~~~~~~g~~p~~~~  137 (252)
                      +   ..... .....||++|+|||++...+ .+++.||||.|||+..++++..|| ...++.+.+..+..++|.-+..- 
T Consensus       224 ~~~~~~r~~~~anrAGT~GfRaPEvL~k~~~QttaiDiws~GVI~Lslls~~~PFf~a~dd~~al~ei~tifG~~~mrk-  302 (418)
T KOG1167|consen  224 RRCNDGRPSERANRAGTPGFRAPEVLFRCPRQTTAIDIWSAGVILLSLLSRRYPFFKAKDDADALAEIATIFGSAEMRK-  302 (418)
T ss_pred             eccCCCccceecccCCCCCCCchHHHhhccCcCCccceeeccceeehhhccccccccCccccchHHHHHHHhChHHHHH-
Confidence            0   00000 11257999999999998765 578999999999999999999876 66677788999999988643211 


Q ss_pred             HHhhHHHHHHhhcCC--CCCCccccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhh-hccccc
Q 025467          138 KRVDRHAEKYVRRGR--LDWPEGAASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIM-QHVDHS  214 (252)
Q Consensus       138 ~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~  214 (252)
                              ...-.|.  +..+.....  ..+.........                .+.+..   +....... ...+..
T Consensus       303 --------~A~l~g~~~l~~ksn~~~--~~e~~~~f~s~~----------------~~~~~~---~~q~n~~~~~~~d~~  353 (418)
T KOG1167|consen  303 --------CAALPGRILLWQKSNIPT--IPELRVNFETLH----------------IESIYK---SRQPNTEREIGSDVF  353 (418)
T ss_pred             --------HhhcCCceeeeccccccc--cHHHHhchhccC----------------hhhccc---ccccceeeccccccc
Confidence                    0011111  100000000  000000000000                000000   00000111 222445


Q ss_pred             hhhHHHHHHHhccCCCCCCCCHHHHHcCCCCCCcc
Q 025467          215 AGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRDH  249 (252)
Q Consensus       215 ~~~~~~ll~~~L~~dP~~R~ta~e~l~hpwf~~~~  249 (252)
                      +..+.+||.+||..||.+|+||+++|+||||+...
T Consensus       354 ~~~~~dlLdk~le~np~kRitAEeALkHpFF~~~~  388 (418)
T KOG1167|consen  354 PALLLDLLDKCLELNPQKRITAEDALKHPFFDEAD  388 (418)
T ss_pred             cHHHHHHHHHHccCChhhcccHHHHhcCcCCcchh
Confidence            56899999999999999999999999999998543

>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]

Probab=99.94  E-value=5.3e-27  Score=209.62  Aligned_cols=147  Identities=31%  Similarity=0.532  Sum_probs=116.9

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCCC----ccccC
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQN----YIVST   76 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~~----~~~~t   76 (252)
                      ||.-||+.|+|||||||+|||+                           +..++++|+|||.+..+.....    ..+||
T Consensus       187 AldslH~mgyVHRDiKPDNvLl---------------------------d~~GHikLADFGsClkm~~dG~V~s~~aVGT  239 (1317)
T KOG0612|consen  187 ALDSLHSMGYVHRDIKPDNVLL---------------------------DKSGHIKLADFGSCLKMDADGTVRSSVAVGT  239 (1317)
T ss_pred             HHHHHHhccceeccCCcceeEe---------------------------cccCcEeeccchhHHhcCCCCcEEeccccCC
Confidence            6888999999999999999999                           6777888899988766554432    35899


Q ss_pred             CCcccchhhhc-----CCCCccchhHhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHHHHHHhhcC
Q 025467           77 RHYRAPEVILG-----LGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRG  151 (252)
Q Consensus        77 ~~y~aPE~l~~-----~~~~~~~Diws~G~~l~~l~~g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~  151 (252)
                      |-|.+||++..     +.|+..+|+||+||++|+|+.|..||....-.+....|+..                     +.
T Consensus       240 PDYISPEvLqs~~~~~g~yG~ecDwWSlGV~~YEMlyG~TPFYadslveTY~KIm~h---------------------k~  298 (1317)
T KOG0612|consen  240 PDYISPEVLQSQGDGKGEYGRECDWWSLGVFMYEMLYGETPFYADSLVETYGKIMNH---------------------KE  298 (1317)
T ss_pred             CCccCHHHHHhhcCCccccCCccchhhhHHHHHHHHcCCCcchHHHHHHHHHHHhch---------------------hh
Confidence            99999999963     45899999999999999999999999876655555444332                     12


Q ss_pred             CCCCCccccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCC
Q 025467          152 RLDWPEGAASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPT  231 (252)
Q Consensus       152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~  231 (252)
                      .+.+|.                                                     ...+++++++||.+++. +|+
T Consensus       299 ~l~FP~-----------------------------------------------------~~~VSeeakdLI~~ll~-~~e  324 (1317)
T KOG0612|consen  299 SLSFPD-----------------------------------------------------ETDVSEEAKDLIEALLC-DRE  324 (1317)
T ss_pred             hcCCCc-----------------------------------------------------ccccCHHHHHHHHHHhc-Chh
Confidence            233331                                                     13367899999999776 788


Q ss_pred             CCCC---HHHHHcCCCCCCcc
Q 025467          232 DRLT---AREALRHPFFTRDH  249 (252)
Q Consensus       232 ~R~t---a~e~l~hpwf~~~~  249 (252)
                      .|..   ++++..||||.+.+
T Consensus       325 ~RLgrngiedik~HpFF~g~~  345 (1317)
T KOG0612|consen  325 VRLGRNGIEDIKNHPFFEGID  345 (1317)
T ss_pred             hhcccccHHHHHhCccccCCC
Confidence            9999   99999999999864

>PHA02988 hypothetical protein; Provisional

Probab=99.94  E-value=1.3e-26  Score=189.17  Aligned_cols=94  Identities=19%  Similarity=0.176  Sum_probs=75.8

Q ss_pred             Chhhhhc-cCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCCCccccCCCc
Q 025467            1 MFAVMHD-LCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHY   79 (252)
Q Consensus         1 aL~~lH~-~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~~~~~~t~~y   79 (252)
                      ||+|||+ .+++||||||+|||++.                           ++.+|++|||++...........++..|
T Consensus       134 ~l~~lH~~~~~~Hrdlkp~nill~~---------------------------~~~~kl~dfg~~~~~~~~~~~~~~~~~y  186 (283)
T PHA02988        134 GLYNLYKYTNKPYKNLTSVSFLVTE---------------------------NYKLKIICHGLEKILSSPPFKNVNFMVY  186 (283)
T ss_pred             HHHHHHhcCCCCCCcCChhhEEECC---------------------------CCcEEEcccchHhhhccccccccCcccc
Confidence            5889998 59999999999999944                           4557788888776544433344678899


Q ss_pred             ccchhhhc--CCCCccchhHhHHHHHHHHHhCCCCCCCCChHHH
Q 025467           80 RAPEVILG--LGWTYPCDIWSVGCILVELCTGEALFQTHENLEH  121 (252)
Q Consensus        80 ~aPE~l~~--~~~~~~~Diws~G~~l~~l~~g~~pf~~~~~~~~  121 (252)
                      +|||++.+  ..++.++|||||||++|++++|..||.+.+..+.
T Consensus       187 ~aPE~~~~~~~~~~~k~Di~SlGvil~el~~g~~Pf~~~~~~~~  230 (283)
T PHA02988        187 FSYKMLNDIFSEYTIKDDIYSLGVVLWEIFTGKIPFENLTTKEI  230 (283)
T ss_pred             cCHHHhhhccccccchhhhhHHHHHHHHHHHCCCCCCCCCHHHH
Confidence            99999976  5789999999999999999999999987654433

>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase

Probab=99.94  E-value=1.7e-26  Score=190.51  Aligned_cols=164  Identities=29%  Similarity=0.426  Sum_probs=108.3

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCcccc-CCCCCccccCCCc
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYE-RPDQNYIVSTRHY   79 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~-~~~~~~~~~t~~y   79 (252)
                      ||+|||++|++||||||+||+++..+.+++.|||.+.........          .+.+....... ........++..|
T Consensus       113 ~l~~lH~~~i~H~dl~p~NIll~~~~~~~l~dfg~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~y  182 (305)
T cd05609         113 ALEYLHNYGIVHRDLKPDNLLITSMGHIKLTDFGLSKIGLMSLTT----------NLYEGHIEKDTREFLDKQVCGTPEY  182 (305)
T ss_pred             HHHHHHHCCccccCCchHHEEECCCCCEEEeeCCCccccCcCccc----------cccccccccchhhccccCCccCccc
Confidence            689999999999999999999976666666666654321100000          00000000000 0000112467789


Q ss_pred             ccchhhhcCCCCccchhHhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHHHHHHhhcCCCCCCccc
Q 025467           80 RAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGA  159 (252)
Q Consensus        80 ~aPE~l~~~~~~~~~Diws~G~~l~~l~~g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~  159 (252)
                      +|||.+....++.++|+||+||++|++++|..||.+..............                       ..++.  
T Consensus       183 ~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~pf~~~~~~~~~~~~~~~~-----------------------~~~~~--  237 (305)
T cd05609         183 IAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTPEELFGQVISDD-----------------------IEWPE--  237 (305)
T ss_pred             cCchhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcc-----------------------cCCCC--
Confidence            99999988888999999999999999999999997655433332221110                       00110  


Q ss_pred             cchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCCCCC---H
Q 025467          160 ASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLT---A  236 (252)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~t---a  236 (252)
                                                                        .....+.++.++|.+||+.||++|||   +
T Consensus       238 --------------------------------------------------~~~~~~~~~~~li~~~l~~~P~~R~~~~~~  267 (305)
T cd05609         238 --------------------------------------------------GDEALPADAQDLISRLLRQNPLERLGTGGA  267 (305)
T ss_pred             --------------------------------------------------ccccCCHHHHHHHHHHhccChhhccCccCH
Confidence                                                              00124568899999999999999998   8


Q ss_pred             HHHHcCCCCCCcc
Q 025467          237 REALRHPFFTRDH  249 (252)
Q Consensus       237 ~e~l~hpwf~~~~  249 (252)
                      .++|+||||...+
T Consensus       268 ~~ll~~~~~~~~~  280 (305)
T cd05609         268 FEVKQHRFFLGLD  280 (305)
T ss_pred             HHHHhCccccCCC
Confidence            9999999997654

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a

>KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.94  E-value=1.4e-26  Score=188.17  Aligned_cols=143  Identities=28%  Similarity=0.437  Sum_probs=120.5

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccC---CCCCccccCC
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYER---PDQNYIVSTR   77 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~---~~~~~~~~t~   77 (252)
                      ||-|||++||++||||..||++                           +..+++||+|||+++...   ......+||+
T Consensus       462 gLFFLh~kgIiYRDLKLDNvmL---------------------------d~eGHiKi~DFGmcKEni~~~~TTkTFCGTP  514 (683)
T KOG0696|consen  462 GLFFLHSKGIIYRDLKLDNVML---------------------------DSEGHIKIADFGMCKENIFDGVTTKTFCGTP  514 (683)
T ss_pred             HhhhhhcCCeeeeeccccceEe---------------------------ccCCceEeeecccccccccCCcceeeecCCC
Confidence            5779999999999999999999                           556678888888876422   2233469999


Q ss_pred             CcccchhhhcCCCCccchhHhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHHHHHHhhcCCCCCCc
Q 025467           78 HYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPE  157 (252)
Q Consensus        78 ~y~aPE~l~~~~~~~~~Diws~G~~l~~l~~g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~  157 (252)
                      .|+|||.+...+|+.++|+||+||+||+|+.|++||.+.++.+.++.|.+-....|                        
T Consensus       515 dYiAPEIi~YqPYgksvDWWa~GVLLyEmlaGQpPFdGeDE~elF~aI~ehnvsyP------------------------  570 (683)
T KOG0696|consen  515 DYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDEDELFQAIMEHNVSYP------------------------  570 (683)
T ss_pred             cccccceEEecccccchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHccCcCc------------------------
Confidence            99999999999999999999999999999999999999999888887766444333                        


Q ss_pred             cccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCCCCC--
Q 025467          158 GAASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLT--  235 (252)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~t--  235 (252)
                                                                            ...+.++.++.+.+|...|.+|..  
T Consensus       571 ------------------------------------------------------KslSkEAv~ickg~ltK~P~kRLGcg  596 (683)
T KOG0696|consen  571 ------------------------------------------------------KSLSKEAVAICKGLLTKHPGKRLGCG  596 (683)
T ss_pred             ------------------------------------------------------ccccHHHHHHHHHHhhcCCccccCCC
Confidence                                                                  234568899999999999999986  


Q ss_pred             ---HHHHHcCCCCCCc
Q 025467          236 ---AREALRHPFFTRD  248 (252)
Q Consensus       236 ---a~e~l~hpwf~~~  248 (252)
                         -.++-+||||...
T Consensus       597 ~~ge~di~~H~FFR~i  612 (683)
T KOG0696|consen  597 PEGERDIREHPFFRRI  612 (683)
T ss_pred             CccccchhhCcchhhc
Confidence               4689999999865

>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3

Probab=99.94  E-value=1.3e-26  Score=187.50  Aligned_cols=90  Identities=28%  Similarity=0.458  Sum_probs=69.5

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCC---CCccccCC
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD---QNYIVSTR   77 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~---~~~~~~t~   77 (252)
                      ||+|||++||+|+||||+||++..++                           .++|+|||.+......   .....|+.
T Consensus       118 ~l~~lH~~~i~H~dlkp~nili~~~~---------------------------~~~l~dfg~~~~~~~~~~~~~~~~~~~  170 (267)
T cd06645         118 GLYYLHSKGKMHRDIKGANILLTDNG---------------------------HVKLADFGVSAQITATIAKRKSFIGTP  170 (267)
T ss_pred             HHHHHHHCCeecCCCCHHHEEECCCC---------------------------CEEECcceeeeEccCcccccccccCcc
Confidence            58999999999999999999995444                           4566666665432211   12236788


Q ss_pred             Ccccchhhh---cCCCCccchhHhHHHHHHHHHhCCCCCCCCC
Q 025467           78 HYRAPEVIL---GLGWTYPCDIWSVGCILVELCTGEALFQTHE  117 (252)
Q Consensus        78 ~y~aPE~l~---~~~~~~~~Diws~G~~l~~l~~g~~pf~~~~  117 (252)
                      .|+|||++.   ...++.++|+||+||++|++++|..||....
T Consensus       171 ~y~aPE~~~~~~~~~~~~~~DvwSlG~il~~l~~~~~p~~~~~  213 (267)
T cd06645         171 YWMAPEVAAVERKGGYNQLCDIWAVGITAIELAELQPPMFDLH  213 (267)
T ss_pred             cccChhhhccccCCCCCchhhhHHHHHHHHHHhcCCCCccccc
Confidence            999999985   3457889999999999999999999986443

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=99.94  E-value=1.2e-27  Score=216.06  Aligned_cols=145  Identities=31%  Similarity=0.465  Sum_probs=110.4

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCC-------Ccc
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ-------NYI   73 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~-------~~~   73 (252)
                      ||+|||++|||||||||.||+++.                           ++.+|+.|||.|.......       ...
T Consensus      1346 gla~LH~~gIVHRDIK~aNI~Ld~---------------------------~g~iK~~DFGsa~ki~~~~~~~~~el~~~ 1398 (1509)
T KOG4645|consen 1346 GLAYLHEHGIVHRDIKPANILLDF---------------------------NGLIKYGDFGSAVKIKNNAQTMPGELQSM 1398 (1509)
T ss_pred             HHHHHHhcCceecCCCccceeeec---------------------------CCcEEeecccceeEecCchhcCCHHHHhh
Confidence            589999999999999999999954                           4456666666665433322       125


Q ss_pred             ccCCCcccchhhhcC---CCCccchhHhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHHHHHHhhc
Q 025467           74 VSTRHYRAPEVILGL---GWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRR  150 (252)
Q Consensus        74 ~~t~~y~aPE~l~~~---~~~~~~Diws~G~~l~~l~~g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~  150 (252)
                      .||+.|||||++.+.   +-..+.||||+||++.||+||+.|+...++.-+++.-+.....++                 
T Consensus      1399 ~GT~~YMAPEvit~t~~kG~~~A~DiWslGCVVlEM~tGkrPW~~~dne~aIMy~V~~gh~Pq----------------- 1461 (1509)
T KOG4645|consen 1399 MGTPMYMAPEVITGTKGKGHGGAADIWSLGCVVLEMATGKRPWAELDNEWAIMYHVAAGHKPQ----------------- 1461 (1509)
T ss_pred             cCCchhcCchhhcccccCCCCcchhhhcccceEEEeecCCCchhhccchhHHHhHHhccCCCC-----------------
Confidence            899999999999864   356789999999999999999999987665544443332221111                 


Q ss_pred             CCCCCCccccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCC
Q 025467          151 GRLDWPEGAASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDP  230 (252)
Q Consensus       151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP  230 (252)
                          .|                                                       ...+.+.+|||..||+.||
T Consensus      1462 ----~P-------------------------------------------------------~~ls~~g~dFle~Cl~~dP 1482 (1509)
T KOG4645|consen 1462 ----IP-------------------------------------------------------ERLSSEGRDFLEHCLEQDP 1482 (1509)
T ss_pred             ----Cc-------------------------------------------------------hhhhHhHHHHHHHHHhcCc
Confidence                11                                                       1245688999999999999


Q ss_pred             CCCCCHHHHHcCCCCCCc
Q 025467          231 TDRLTAREALRHPFFTRD  248 (252)
Q Consensus       231 ~~R~ta~e~l~hpwf~~~  248 (252)
                      .+|.||.|+|+|-|-+..
T Consensus      1483 ~~Rw~~~qlle~~f~~~~ 1500 (1509)
T KOG4645|consen 1483 KMRWTASQLLEHAFGKSC 1500 (1509)
T ss_pred             hhhhHHHHHHHhhccccc
Confidence            999999999999987654

>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta

Probab=99.94  E-value=7.8e-27  Score=194.64  Aligned_cols=148  Identities=27%  Similarity=0.466  Sum_probs=106.5

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCC----CccccC
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ----NYIVST   76 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~----~~~~~t   76 (252)
                      ||+|||++||+||||||+|||++.                           .+.++|+|||++.......    ....||
T Consensus       114 ~L~~lH~~~iiHrDlkp~Nill~~---------------------------~~~~kl~DfG~a~~~~~~~~~~~~~~~gt  166 (331)
T cd05624         114 AIHSIHQLHYVHRDIKPDNVLLDM---------------------------NGHIRLADFGSCLKMNQDGTVQSSVAVGT  166 (331)
T ss_pred             HHHHHHHCCeeeccCchHHEEEcC---------------------------CCCEEEEeccceeeccCCCceeeccccCC
Confidence            689999999999999999999944                           4456777777765432221    124689


Q ss_pred             CCcccchhhhc-----CCCCccchhHhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHHHHHHhhcC
Q 025467           77 RHYRAPEVILG-----LGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRG  151 (252)
Q Consensus        77 ~~y~aPE~l~~-----~~~~~~~Diws~G~~l~~l~~g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~  151 (252)
                      +.|+|||++.+     ..++.++|+||+||++|+|++|+.||.+.+..+....+....                     .
T Consensus       167 ~~y~aPE~~~~~~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~~~~~~i~~~~---------------------~  225 (331)
T cd05624         167 PDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHE---------------------E  225 (331)
T ss_pred             cccCCHHHHhccccCCCCCCCcccEEeeehhhhhhhhCCCCccCCCHHHHHHHHHcCC---------------------C
Confidence            99999999875     457889999999999999999999998665443333221100                     0


Q ss_pred             CCCCCccccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCC
Q 025467          152 RLDWPEGAASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPT  231 (252)
Q Consensus       152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~  231 (252)
                      .+.++.                                                    .....++++.+|+.+||..++.
T Consensus       226 ~~~~p~----------------------------------------------------~~~~~~~~~~~li~~ll~~~~~  253 (331)
T cd05624         226 RFQFPS----------------------------------------------------HITDVSEEAKDLIQRLICSRER  253 (331)
T ss_pred             cccCCC----------------------------------------------------ccccCCHHHHHHHHHHccCchh
Confidence            011110                                                    0122456899999999997665


Q ss_pred             C--CCCHHHHHcCCCCCCc
Q 025467          232 D--RLTAREALRHPFFTRD  248 (252)
Q Consensus       232 ~--R~ta~e~l~hpwf~~~  248 (252)
                      +  |++++++++||||+..
T Consensus       254 ~~~~~~~~~~~~h~~f~~~  272 (331)
T cd05624         254 RLGQNGIEDFKKHAFFEGI  272 (331)
T ss_pred             hcCCCCHHHHhcCCCcCCC
Confidence            4  5699999999999864

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.

>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta

Probab=99.94  E-value=6.6e-27  Score=194.82  Aligned_cols=102  Identities=20%  Similarity=0.300  Sum_probs=69.9

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCCCccccCCCcc
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYR   80 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~~~~~~t~~y~   80 (252)
                      ||+|||+.||+||||||+||++..++..++.+|+.+.......                 +.............++..|+
T Consensus       113 aL~~lH~~~ivHrDlkp~Nill~~~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~~~~~~~~~y~  175 (328)
T cd08226         113 GLNYLHQNGYIHRNIKASHILISGDGLVSLSGLSHLYSLVRNG-----------------QKAKVVYDFPQFSTSVLPWL  175 (328)
T ss_pred             HHHHHHhCCeecCCCCHHHEEEeCCCcEEEechHHHhhhhccC-----------------ccccccccccccccCccCcc
Confidence            6899999999999999999999776666665554321110000                 00000000011123456799


Q ss_pred             cchhhhcC--CCCccchhHhHHHHHHHHHhCCCCCCCCChH
Q 025467           81 APEVILGL--GWTYPCDIWSVGCILVELCTGEALFQTHENL  119 (252)
Q Consensus        81 aPE~l~~~--~~~~~~Diws~G~~l~~l~~g~~pf~~~~~~  119 (252)
                      |||++.+.  .++.++||||+||++|++++|..||......
T Consensus       176 aPE~~~~~~~~~~~~~DiwslG~~l~el~~g~~p~~~~~~~  216 (328)
T cd08226         176 SPELLRQDLYGYNVKSDIYSVGITACELATGRVPFQDMLRT  216 (328)
T ss_pred             ChhhhcCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCcChH
Confidence            99999764  4789999999999999999999999765543

Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig

>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3

Probab=99.94  E-value=2.8e-26  Score=189.90  Aligned_cols=147  Identities=29%  Similarity=0.456  Sum_probs=108.5

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCCCccccCCCcc
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYR   80 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~~~~~~t~~y~   80 (252)
                      ||+|||++||+|+||+|+||++..                           ...++|+|||.+...... ....++..|+
T Consensus       133 al~~LH~~gi~H~dl~p~nili~~---------------------------~~~~kL~dfg~~~~~~~~-~~~~~~~~y~  184 (313)
T cd06633         133 GLAYLHSHNMIHRDIKAGNILLTE---------------------------PGQVKLADFGSASKSSPA-NSFVGTPYWM  184 (313)
T ss_pred             HHHHHHHCCeecCCCChhhEEECC---------------------------CCCEEEeecCCCcccCCC-CCcccccccc
Confidence            589999999999999999999943                           345777788776543322 2346788899


Q ss_pred             cchhhh---cCCCCccchhHhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHHHHHHhhcCCCCCCc
Q 025467           81 APEVIL---GLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPE  157 (252)
Q Consensus        81 aPE~l~---~~~~~~~~Diws~G~~l~~l~~g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~  157 (252)
                      |||++.   ...++.++|+||+||++|++++|..||...+.......+..  +..|.                    .  
T Consensus       185 aPE~~~~~~~~~~~~~sDv~slGvil~el~~g~~p~~~~~~~~~~~~~~~--~~~~~--------------------~--  240 (313)
T cd06633         185 APEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQ--NDSPT--------------------L--  240 (313)
T ss_pred             ChhhccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHh--cCCCC--------------------C--
Confidence            999985   34578899999999999999999999876554333322211  00000                    0  


Q ss_pred             cccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCCCCCHH
Q 025467          158 GAASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAR  237 (252)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~ta~  237 (252)
                                                                          .....+..+.+|+.+||+.+|.+|||+.
T Consensus       241 ----------------------------------------------------~~~~~~~~l~~li~~~l~~~P~~Rp~~~  268 (313)
T cd06633         241 ----------------------------------------------------QSNEWTDSFRGFVDYCLQKIPQERPASA  268 (313)
T ss_pred             ----------------------------------------------------CccccCHHHHHHHHHHccCChhhCcCHH
Confidence                                                                0012234688999999999999999999


Q ss_pred             HHHcCCCCCCcccc
Q 025467          238 EALRHPFFTRDHLR  251 (252)
Q Consensus       238 e~l~hpwf~~~~~~  251 (252)
                      +++.||||...+.+
T Consensus       269 ~~l~~~~~~~~~~~  282 (313)
T cd06633         269 ELLRHDFVRRDRPA  282 (313)
T ss_pred             HHhcCcccCCCchh
Confidence            99999999987653

Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co

>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase

Probab=99.94  E-value=2.4e-26  Score=185.98  Aligned_cols=144  Identities=27%  Similarity=0.452  Sum_probs=102.3

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCC---CCccccCC
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD---QNYIVSTR   77 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~---~~~~~~t~   77 (252)
                      ||+|||+.||+||||||+||+++.+                          ...++|+|||.+......   .....++.
T Consensus       120 al~~lH~~~i~h~dl~p~nil~~~~--------------------------~~~~~l~dfg~~~~~~~~~~~~~~~~~~~  173 (268)
T cd06624         120 GLKYLHDNQIVHRDIKGDNVLVNTY--------------------------SGVVKISDFGTSKRLAGINPCTETFTGTL  173 (268)
T ss_pred             HHHHHHHCCEeecCCCHHHEEEcCC--------------------------CCeEEEecchhheecccCCCccccCCCCc
Confidence            6899999999999999999999431                          235677787776543221   11235788


Q ss_pred             CcccchhhhcCC--CCccchhHhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHHHHHHhhcCCCCC
Q 025467           78 HYRAPEVILGLG--WTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDW  155 (252)
Q Consensus        78 ~y~aPE~l~~~~--~~~~~Diws~G~~l~~l~~g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~  155 (252)
                      .|+|||++....  ++.++|+||+||++|++++|..||..................                    .   
T Consensus       174 ~~~aPE~~~~~~~~~~~~~Dv~slGvvl~~l~~g~~p~~~~~~~~~~~~~~~~~~~--------------------~---  230 (268)
T cd06624         174 QYMAPEVIDKGPRGYGAPADIWSLGCTIVEMATGKPPFIELGEPQAAMFKVGMFKI--------------------H---  230 (268)
T ss_pred             cccChhhhccccccCCchhhhHHHHHHHHHHHhCCCCCccccChhhhHhhhhhhcc--------------------C---
Confidence            899999986643  788999999999999999999998643321110000000000                    0   


Q ss_pred             CccccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCCCCC
Q 025467          156 PEGAASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLT  235 (252)
Q Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~t  235 (252)
                                                                          .......++++.+|+.+||+.+|.+|||
T Consensus       231 ----------------------------------------------------~~~~~~~~~~~~~li~~~l~~~p~~Rpt  258 (268)
T cd06624         231 ----------------------------------------------------PEIPESLSAEAKNFILRCFEPDPDKRAS  258 (268)
T ss_pred             ----------------------------------------------------CCCCcccCHHHHHHHHHHcCCCchhCCC
Confidence                                                                0001224468899999999999999999


Q ss_pred             HHHHHcCCCC
Q 025467          236 AREALRHPFF  245 (252)
Q Consensus       236 a~e~l~hpwf  245 (252)
                      +.+++.||||
T Consensus       259 ~~~ll~~~~~  268 (268)
T cd06624         259 AHDLLQDPFL  268 (268)
T ss_pred             HHHHHhCCCC
Confidence            9999999997

Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina

>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases

Probab=99.94  E-value=1.4e-26  Score=187.56  Aligned_cols=143  Identities=27%  Similarity=0.456  Sum_probs=102.1

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCC---CCccccCC
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD---QNYIVSTR   77 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~---~~~~~~t~   77 (252)
                      ||+|||+.|++|+||+|+||+++.++                           .++++|||.+......   .....++.
T Consensus       125 al~~lH~~~i~H~~l~p~ni~~~~~~---------------------------~~~l~d~~~~~~~~~~~~~~~~~~~~~  177 (275)
T cd06608         125 GLAYLHENKVIHRDIKGQNILLTKNA---------------------------EVKLVDFGVSAQLDSTLGRRNTFIGTP  177 (275)
T ss_pred             HHHHHhcCCcccCCCCHHHEEEccCC---------------------------eEEECCCccceecccchhhhcCccccc
Confidence            68999999999999999999995444                           4666666665432211   12235788


Q ss_pred             CcccchhhhcC-----CCCccchhHhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHHHHHHhhcCC
Q 025467           78 HYRAPEVILGL-----GWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGR  152 (252)
Q Consensus        78 ~y~aPE~l~~~-----~~~~~~Diws~G~~l~~l~~g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~  152 (252)
                      .|+|||++...     .++.++||||+||+++++++|..||........+..+..  +..+                   
T Consensus       178 ~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~--~~~~-------------------  236 (275)
T cd06608         178 YWMAPEVIACDEQPDASYDARSDVWSLGITAIELADGKPPLCDMHPMRALFKIPR--NPPP-------------------  236 (275)
T ss_pred             cccCHhHhcccccccCCccccccHHHhHHHHHHHHhCCCCccccchHHHHHHhhc--cCCC-------------------
Confidence            89999998642     367789999999999999999999975443322222111  0000                   


Q ss_pred             CCCCccccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCC
Q 025467          153 LDWPEGAASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTD  232 (252)
Q Consensus       153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~  232 (252)
                       ..                                                     ......+..+.+|+.+||..||++
T Consensus       237 -~~-----------------------------------------------------~~~~~~~~~~~~li~~~l~~dp~~  262 (275)
T cd06608         237 -TL-----------------------------------------------------KSPENWSKKFNDFISECLIKNYEQ  262 (275)
T ss_pred             -CC-----------------------------------------------------CchhhcCHHHHHHHHHHhhcChhh
Confidence             00                                                     000123458899999999999999


Q ss_pred             CCCHHHHHcCCCC
Q 025467          233 RLTAREALRHPFF  245 (252)
Q Consensus       233 R~ta~e~l~hpwf  245 (252)
                      |||+.++++|||+
T Consensus       263 Rpt~~~ll~~~~~  275 (275)
T cd06608         263 RPFMEELLEHPFI  275 (275)
T ss_pred             CcCHHHHhcCCCC
Confidence            9999999999996

Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I

>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases

Probab=99.94  E-value=1.7e-26  Score=188.10  Aligned_cols=147  Identities=31%  Similarity=0.518  Sum_probs=105.1

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCC---CCccccCC
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD---QNYIVSTR   77 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~---~~~~~~t~   77 (252)
                      ||.|||++||+|+||+|+||+++.++                           .++++|||.+......   .....++.
T Consensus       115 ~l~~lh~~~i~h~dl~p~nili~~~~---------------------------~~~l~d~g~~~~~~~~~~~~~~~~~~~  167 (280)
T cd06611         115 ALNFLHSHKVIHRDLKAGNILLTLDG---------------------------DVKLADFGVSAKNKSTLQKRDTFIGTP  167 (280)
T ss_pred             HHHHHHHCCcccCCCChhhEEECCCC---------------------------CEEEccCccchhhcccccccceeecch
Confidence            58899999999999999999995444                           4666666655432211   12235788


Q ss_pred             Ccccchhhhc-----CCCCccchhHhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHHHHHHhhcCC
Q 025467           78 HYRAPEVILG-----LGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGR  152 (252)
Q Consensus        78 ~y~aPE~l~~-----~~~~~~~Diws~G~~l~~l~~g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~  152 (252)
                      .|++||.+..     ..++.++|+||+||++|++++|..||...+....+..+..  +..|                  .
T Consensus       168 ~y~~PE~~~~~~~~~~~~~~~sDi~slG~il~~l~~g~~p~~~~~~~~~~~~~~~--~~~~------------------~  227 (280)
T cd06611         168 YWMAPEVVACETFKDNPYDYKADIWSLGITLIELAQMEPPHHELNPMRVLLKILK--SEPP------------------T  227 (280)
T ss_pred             hhcCHHHHhhcccCCCCCCccccHHHHHHHHHHHHhCCCCcccCCHHHHHHHHhc--CCCC------------------C
Confidence            8999999853     3467789999999999999999999976544332222110  0000                  0


Q ss_pred             CCCCccccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCC
Q 025467          153 LDWPEGAASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTD  232 (252)
Q Consensus       153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~  232 (252)
                      +.                                                       .....+.++.+++.+||+.||.+
T Consensus       228 ~~-------------------------------------------------------~~~~~~~~~~~li~~~l~~~p~~  252 (280)
T cd06611         228 LD-------------------------------------------------------QPSKWSSSFNDFLKSCLVKDPDD  252 (280)
T ss_pred             cC-------------------------------------------------------CcccCCHHHHHHHHHHhccChhh
Confidence            00                                                       00123457899999999999999


Q ss_pred             CCCHHHHHcCCCCCCcc
Q 025467          233 RLTAREALRHPFFTRDH  249 (252)
Q Consensus       233 R~ta~e~l~hpwf~~~~  249 (252)
                      |||+.++++||||.+..
T Consensus       253 Rps~~~il~~~~~~~~~  269 (280)
T cd06611         253 RPTAAELLKHPFVSDQS  269 (280)
T ss_pred             CcCHHHHhcChhhcccc
Confidence            99999999999998753

Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti

>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2

Probab=99.94  E-value=2.3e-26  Score=185.83  Aligned_cols=90  Identities=32%  Similarity=0.538  Sum_probs=70.7

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCC------CCCccc
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERP------DQNYIV   74 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~------~~~~~~   74 (252)
                      ||+|||+++|+|+||||+||+++.++.                           ++|+|||.+.....      ......
T Consensus       118 ~l~~lH~~~i~H~dl~p~nil~~~~~~---------------------------~~l~Dfg~~~~~~~~~~~~~~~~~~~  170 (265)
T cd06652         118 GVSYLHSNMIVHRDIKGANILRDSVGN---------------------------VKLGDFGASKRLQTICLSGTGMKSVT  170 (265)
T ss_pred             HHHHHHhCCEecCCCCHHHEEecCCCC---------------------------EEECcCccccccccccccccccccCC
Confidence            689999999999999999999965444                           55555555443211      112235


Q ss_pred             cCCCcccchhhhcCCCCccchhHhHHHHHHHHHhCCCCCCCCC
Q 025467           75 STRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHE  117 (252)
Q Consensus        75 ~t~~y~aPE~l~~~~~~~~~Diws~G~~l~~l~~g~~pf~~~~  117 (252)
                      ++..|+|||.+.+..++.++|+||+||++|++++|..||....
T Consensus       171 ~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~  213 (265)
T cd06652         171 GTPYWMSPEVISGEGYGRKADIWSVGCTVVEMLTEKPPWAEFE  213 (265)
T ss_pred             CCccccChhhhcCCCCCcchhHHHHHHHHHHHhhCCCCCCccc
Confidence            7889999999988888999999999999999999999997543

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re

>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8

Probab=99.93  E-value=3e-26  Score=183.94  Aligned_cols=142  Identities=26%  Similarity=0.449  Sum_probs=106.0

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCC--CccccCCC
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ--NYIVSTRH   78 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~--~~~~~t~~   78 (252)
                      ||+|||++||+|+||+|+||+++.+                          ...++++|||.+.......  ....++..
T Consensus       113 ~l~~lh~~~i~h~dl~~~nil~~~~--------------------------~~~~~l~d~~~~~~~~~~~~~~~~~~~~~  166 (256)
T cd08220         113 ALHHVHTKLILHRDLKTQNILLDKH--------------------------KMVVKIGDFGISKILSSKSKAYTVVGTPC  166 (256)
T ss_pred             HHHHHHhCCeecCCCCHHHEEEcCC--------------------------CCEEEEccCCCceecCCCccccccccCCc
Confidence            5889999999999999999999532                          2346777887776443322  22467888


Q ss_pred             cccchhhhcCCCCccchhHhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHHHHHHhhcCCCCCCcc
Q 025467           79 YRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEG  158 (252)
Q Consensus        79 y~aPE~l~~~~~~~~~Diws~G~~l~~l~~g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~  158 (252)
                      |+|||.+.+..++.++|+||+|++++++++|..||.+.+.......+..  +.                    ..     
T Consensus       167 y~aPE~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~--~~--------------------~~-----  219 (256)
T cd08220         167 YISPELCEGKPYNQKSDIWALGCVLYELASLKRAFEAANLPALVLKIMS--GT--------------------FA-----  219 (256)
T ss_pred             ccCchhccCCCCCcccchHHHHHHHHHHHhCCCCcccCchHHHHHHHHh--cC--------------------CC-----
Confidence            9999999888888999999999999999999999976543322211110  00                    00     


Q ss_pred             ccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCCCCCHHH
Q 025467          159 AASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTARE  238 (252)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~ta~e  238 (252)
                                                                        ......+.++.+++.+||..||++|||++|
T Consensus       220 --------------------------------------------------~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~  249 (256)
T cd08220         220 --------------------------------------------------PISDRYSPDLRQLILSMLNLDPSKRPQLSQ  249 (256)
T ss_pred             --------------------------------------------------CCCCCcCHHHHHHHHHHccCChhhCCCHHH
Confidence                                                              001123468899999999999999999999


Q ss_pred             HHcCCCC
Q 025467          239 ALRHPFF  245 (252)
Q Consensus       239 ~l~hpwf  245 (252)
                      +++||||
T Consensus       250 ll~~p~~  256 (256)
T cd08220         250 IMAQPIC  256 (256)
T ss_pred             HhhCCCC
Confidence            9999997

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with

>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1

Probab=99.93  E-value=2.3e-26  Score=184.74  Aligned_cols=141  Identities=27%  Similarity=0.493  Sum_probs=106.0

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCC---CccccCC
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ---NYIVSTR   77 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~---~~~~~t~   77 (252)
                      ||+|||++|++|+||+|+||+++.+                           ..+++.|||.+.......   ....++.
T Consensus       113 ~l~~lh~~~i~h~~l~~~nil~~~~---------------------------~~~~l~d~~~~~~~~~~~~~~~~~~~~~  165 (256)
T cd08218         113 ALKHVHDRKILHRDIKSQNIFLTKD---------------------------GTIKLGDFGIARVLNSTVELARTCIGTP  165 (256)
T ss_pred             HHHHHHhCCEecCCCCHHHEEEcCC---------------------------CCEEEeeccceeecCcchhhhhhccCCc
Confidence            5899999999999999999999543                           446777777665432221   1235778


Q ss_pred             CcccchhhhcCCCCccchhHhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHHHHHHhhcCCCCCCc
Q 025467           78 HYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPE  157 (252)
Q Consensus        78 ~y~aPE~l~~~~~~~~~Diws~G~~l~~l~~g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~  157 (252)
                      .|+|||++.+..++.++|+||+||+++++++|..||...+..+....+.  .+..+                        
T Consensus       166 ~~~~pe~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~~~~~~~~--~~~~~------------------------  219 (256)
T cd08218         166 YYLSPEICENRPYNNKSDIWALGCVLYEMCTLKHAFEAGNMKNLVLKII--RGSYP------------------------  219 (256)
T ss_pred             cccCHHHhCCCCCCCccchhHHHHHHHHHHcCCCCccCCCHHHHHHHHh--cCCCC------------------------
Confidence            8999999988888899999999999999999999997654433322211  01100                        


Q ss_pred             cccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCCCCCHH
Q 025467          158 GAASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAR  237 (252)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~ta~  237 (252)
                                                                         ......+.++.+++.+||+.+|.+|||+.
T Consensus       220 ---------------------------------------------------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~  248 (256)
T cd08218         220 ---------------------------------------------------PVSSHYSYDLRNLVSQLFKRNPRDRPSVN  248 (256)
T ss_pred             ---------------------------------------------------CCcccCCHHHHHHHHHHhhCChhhCcCHH
Confidence                                                               00122356889999999999999999999


Q ss_pred             HHHcCCCC
Q 025467          238 EALRHPFF  245 (252)
Q Consensus       238 e~l~hpwf  245 (252)
                      ++++||||
T Consensus       249 ~vl~~~~~  256 (256)
T cd08218         249 SILEKNFI  256 (256)
T ss_pred             HHhhCcCC
Confidence            99999998

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti

>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase

Probab=99.93  E-value=1.8e-26  Score=187.73  Aligned_cols=149  Identities=28%  Similarity=0.450  Sum_probs=107.3

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCC--CCccccCCC
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD--QNYIVSTRH   78 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~--~~~~~~t~~   78 (252)
                      ||.|||+.|++||||+|+||+++.+                           ..++++|||.+......  .....++..
T Consensus       107 ~l~~lH~~~i~H~di~p~Nil~~~~---------------------------~~~~l~dfg~~~~~~~~~~~~~~~~~~~  159 (277)
T cd05577         107 GLEHLHQRRIVYRDLKPENVLLDDH---------------------------GNVRISDLGLAVELKGGKKIKGRAGTPG  159 (277)
T ss_pred             HHHHHHhCCcccCCCCHHHEEECCC---------------------------CCEEEccCcchhhhccCCccccccCCCC
Confidence            5899999999999999999999543                           45677777766433221  112356778


Q ss_pred             cccchhhhcCCCCccchhHhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHHHHHHhhcCCCCCCcc
Q 025467           79 YRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEG  158 (252)
Q Consensus        79 y~aPE~l~~~~~~~~~Diws~G~~l~~l~~g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~  158 (252)
                      |+|||++.+..++.++|+||+||+++++++|..||...........+....                       ...+  
T Consensus       160 y~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~-----------------------~~~~--  214 (277)
T cd05577         160 YMAPEVLQGEVYDFSVDWFALGCTLYEMIAGRSPFRQRKEKVEKEELKRRT-----------------------LEMA--  214 (277)
T ss_pred             cCCHHHhcCCCCCchhhhHHHHHHHHHHhhCCCCCCCCcccccHHHHHhcc-----------------------cccc--
Confidence            999999988888999999999999999999999997544311111110000                       0000  


Q ss_pred             ccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCCCC----
Q 025467          159 AASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRL----  234 (252)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~----  234 (252)
                                                                       .......++.+.++|.+||+.||++||    
T Consensus       215 -------------------------------------------------~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~  245 (277)
T cd05577         215 -------------------------------------------------VEYPDKFSPEAKDLCEALLQKDPEKRLGCRG  245 (277)
T ss_pred             -------------------------------------------------ccCCccCCHHHHHHHHHHccCChhHccCCCc
Confidence                                                             001122356889999999999999999    


Q ss_pred             -CHHHHHcCCCCCCccc
Q 025467          235 -TAREALRHPFFTRDHL  250 (252)
Q Consensus       235 -ta~e~l~hpwf~~~~~  250 (252)
                       |+.+++.||||++...
T Consensus       246 ~~~~~ll~h~~~~~~~~  262 (277)
T cd05577         246 GSADEVREHPLFKDLNW  262 (277)
T ss_pred             ccHHHHHhChhhhcCCh
Confidence             9999999999987654

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of

>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin

Probab=99.93  E-value=2.7e-26  Score=187.38  Aligned_cols=143  Identities=28%  Similarity=0.471  Sum_probs=101.9

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCC---CCccccCC
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD---QNYIVSTR   77 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~---~~~~~~t~   77 (252)
                      ||.|||+++|+||||||+||+++.++                           .++++|||.+......   .....|+.
T Consensus       136 ~l~~lH~~~i~H~dlkp~nili~~~~---------------------------~~kl~dfg~~~~~~~~~~~~~~~~~~~  188 (286)
T cd06638         136 GLQHLHVNKTIHRDVKGNNILLTTEG---------------------------GVKLVDFGVSAQLTSTRLRRNTSVGTP  188 (286)
T ss_pred             HHHHHHhCCccccCCCHHhEEECCCC---------------------------CEEEccCCceeecccCCCccccccCCC
Confidence            68999999999999999999995443                           4667777766543221   12236788


Q ss_pred             Ccccchhhhc-----CCCCccchhHhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHHHHHHhhcCC
Q 025467           78 HYRAPEVILG-----LGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGR  152 (252)
Q Consensus        78 ~y~aPE~l~~-----~~~~~~~Diws~G~~l~~l~~g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~  152 (252)
                      .|+|||++..     ..++.++|+||+||++|++++|..||........+..+..  +..+                  .
T Consensus       189 ~y~aPE~~~~~~~~~~~~~~~~Dv~slGvi~~el~~g~~p~~~~~~~~~~~~~~~--~~~~------------------~  248 (286)
T cd06638         189 FWMAPEVIACEQQLDSTYDARCDVWSLGITAIELGDGDPPLADLHPMRALFKIPR--NPPP------------------T  248 (286)
T ss_pred             cccChhhhchhhhccccccchhhhhhHHHHHHHHhcCCCCCCCCchhHHHhhccc--cCCC------------------c
Confidence            9999999853     3478899999999999999999999875433221111000  0000                  0


Q ss_pred             CCCCccccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCC
Q 025467          153 LDWPEGAASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTD  232 (252)
Q Consensus       153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~  232 (252)
                      .                                                       ......+..+.+|+.+||+.||++
T Consensus       249 ~-------------------------------------------------------~~~~~~~~~~~~li~~~l~~~p~~  273 (286)
T cd06638         249 L-------------------------------------------------------HQPELWSNEFNDFIRKCLTKDYEK  273 (286)
T ss_pred             c-------------------------------------------------------cCCCCcCHHHHHHHHHHccCCccc
Confidence            0                                                       000112357899999999999999


Q ss_pred             CCCHHHHHcCCCC
Q 025467          233 RLTAREALRHPFF  245 (252)
Q Consensus       233 R~ta~e~l~hpwf  245 (252)
                      |||+.++++|+||
T Consensus       274 Rps~~ell~~~~~  286 (286)
T cd06638         274 RPTVSDLLQHVFI  286 (286)
T ss_pred             CCCHHHHhhcccC
Confidence            9999999999997

Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear

>PTZ00266 NIMA-related protein kinase; Provisional

Probab=99.93  E-value=1.6e-26  Score=210.27  Aligned_cols=161  Identities=26%  Similarity=0.480  Sum_probs=111.6

Q ss_pred             Chhhhhcc-------CccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCC--C
Q 025467            1 MFAVMHDL-------CMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ--N   71 (252)
Q Consensus         1 aL~~lH~~-------~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~--~   71 (252)
                      ||+|||+.       +||||||||+|||+..... .+.+....         ....+....++|+|||++.......  .
T Consensus       130 ALaYLHs~g~~~~~k~IVHRDLKPeNILL~s~~~-~lg~i~~~---------~~n~ng~~iVKLsDFGlAr~l~~~s~~~  199 (1021)
T PTZ00266        130 ALAYCHNLKDGPNGERVLHRDLKPQNIFLSTGIR-HIGKITAQ---------ANNLNGRPIAKIGDFGLSKNIGIESMAH  199 (1021)
T ss_pred             HHHHHHhcccccccCCceeccCcHHHeEeecCcc-cccccccc---------ccccCCCCceEEccCCcccccccccccc
Confidence            68999984       4999999999999965321 01100000         0011334568999999987543221  2


Q ss_pred             ccccCCCcccchhhhcC--CCCccchhHhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHHHHHHhh
Q 025467           72 YIVSTRHYRAPEVILGL--GWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVR  149 (252)
Q Consensus        72 ~~~~t~~y~aPE~l~~~--~~~~~~Diws~G~~l~~l~~g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~  149 (252)
                      ...||+.|+|||++.+.  .++.++|||||||++|+|++|..||...+....+.......   |                
T Consensus       200 s~vGTp~YmAPEvL~ge~~~~s~KSDVWSLG~ILYELLTGk~PF~~~~~~~qli~~lk~~---p----------------  260 (1021)
T PTZ00266        200 SCVGTPYYWSPELLLHETKSYDDKSDMWALGCIIYELCSGKTPFHKANNFSQLISELKRG---P----------------  260 (1021)
T ss_pred             ccCCCccccCHHHHhccCCCCCchhHHHHHHHHHHHHHHCCCCCCcCCcHHHHHHHHhcC---C----------------
Confidence            34789999999998653  47899999999999999999999997655433222111100   0                


Q ss_pred             cCCCCCCccccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCC
Q 025467          150 RGRLDWPEGAASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYD  229 (252)
Q Consensus       150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~d  229 (252)
                          ..+                                                      ....+.++.+||.+||..+
T Consensus       261 ----~lp------------------------------------------------------i~~~S~eL~dLI~~~L~~d  282 (1021)
T PTZ00266        261 ----DLP------------------------------------------------------IKGKSKELNILIKNLLNLS  282 (1021)
T ss_pred             ----CCC------------------------------------------------------cCCCCHHHHHHHHHHhcCC
Confidence                000                                                      0122458899999999999


Q ss_pred             CCCCCCHHHHHcCCCCCCc
Q 025467          230 PTDRLTAREALRHPFFTRD  248 (252)
Q Consensus       230 P~~R~ta~e~l~hpwf~~~  248 (252)
                      |.+|||+.|+|.|||++..
T Consensus       283 PeeRPSa~QlL~h~~ik~i  301 (1021)
T PTZ00266        283 AKERPSALQCLGYQIIKNV  301 (1021)
T ss_pred             hhHCcCHHHHhccHHHhhc
Confidence            9999999999999999743

>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins

Probab=99.93  E-value=8.6e-27  Score=185.48  Aligned_cols=87  Identities=31%  Similarity=0.412  Sum_probs=69.8

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCCCccccCCCcc
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYR   80 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~~~~~~t~~y~   80 (252)
                      ||+|||+.||+||||||+||+++.                           .+.+++.|||.+...........++..|+
T Consensus        97 ~l~~lH~~~i~H~dlkp~Nil~~~---------------------------~~~~~l~df~~~~~~~~~~~~~~~~~~y~  149 (237)
T cd05576          97 ALDALHREGIVCRDLNPNNILLDD---------------------------RGHIQLTYFSRWSEVEDSCDGEAVENMYC  149 (237)
T ss_pred             HHHHHHhCCeeccCCCHHHEEEcC---------------------------CCCEEEecccchhccccccccCCcCcccc
Confidence            689999999999999999999954                           34567777776544433333334567799


Q ss_pred             cchhhhcCCCCccchhHhHHHHHHHHHhCCCCCC
Q 025467           81 APEVILGLGWTYPCDIWSVGCILVELCTGEALFQ  114 (252)
Q Consensus        81 aPE~l~~~~~~~~~Diws~G~~l~~l~~g~~pf~  114 (252)
                      |||.+.+..++.++|+||+||++|++++|..|+.
T Consensus       150 aPE~~~~~~~~~~~DvwslG~il~el~~g~~~~~  183 (237)
T cd05576         150 APEVGGISEETEACDWWSLGAILFELLTGKTLVE  183 (237)
T ss_pred             CCcccCCCCCCchhhHHHHHHHHHHHHHCcchhh
Confidence            9999887788899999999999999999988764

Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha

>KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms]

Probab=99.93  E-value=2.7e-27  Score=198.68  Aligned_cols=90  Identities=31%  Similarity=0.466  Sum_probs=76.6

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCC--CccccCCC
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ--NYIVSTRH   78 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~--~~~~~t~~   78 (252)
                      ++.|||.+.|||||||..||||+.+                           ..+||+|||.++......  ...+||..
T Consensus       224 GM~YLH~hKIIHRDLKSPNiLIs~~---------------------------d~VKIsDFGTS~e~~~~STkMSFaGTVa  276 (904)
T KOG4721|consen  224 GMNYLHLHKIIHRDLKSPNILISYD---------------------------DVVKISDFGTSKELSDKSTKMSFAGTVA  276 (904)
T ss_pred             hhHHHHHhhHhhhccCCCceEeecc---------------------------ceEEeccccchHhhhhhhhhhhhhhhHh
Confidence            5789999999999999999999654                           457778888776544432  23589999


Q ss_pred             cccchhhhcCCCCccchhHhHHHHHHHHHhCCCCCCCCC
Q 025467           79 YRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHE  117 (252)
Q Consensus        79 y~aPE~l~~~~~~~~~Diws~G~~l~~l~~g~~pf~~~~  117 (252)
                      |||||++...+++.+.|||||||+||+|+||..||...+
T Consensus       277 WMAPEvIrnePcsEKVDIwSfGVVLWEmLT~EiPYkdVd  315 (904)
T KOG4721|consen  277 WMAPEVIRNEPCSEKVDIWSFGVVLWEMLTGEIPYKDVD  315 (904)
T ss_pred             hhCHHHhhcCCcccccceehhHHHHHHHHhcCCCccccc
Confidence            999999999999999999999999999999999997544

>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4

Probab=99.93  E-value=2.9e-26  Score=187.97  Aligned_cols=147  Identities=31%  Similarity=0.575  Sum_probs=108.0

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCC---CCccccCC
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD---QNYIVSTR   77 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~---~~~~~~t~   77 (252)
                      ||+|||++|++|+||+|+||+++.+                           +.++++|||.+......   .....++.
T Consensus       128 ~l~~lH~~givH~dl~p~Nilv~~~---------------------------~~~~l~dfg~~~~~~~~~~~~~~~~~~~  180 (292)
T cd06657         128 ALSVLHAQGVIHRDIKSDSILLTHD---------------------------GRVKLSDFGFCAQVSKEVPRRKSLVGTP  180 (292)
T ss_pred             HHHHHHHCCeecCCCCHHHEEECCC---------------------------CCEEEcccccceecccccccccccccCc
Confidence            5899999999999999999999544                           34666666655432221   11235788


Q ss_pred             CcccchhhhcCCCCccchhHhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHHHHHHhhcCCCCCCc
Q 025467           78 HYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPE  157 (252)
Q Consensus        78 ~y~aPE~l~~~~~~~~~Diws~G~~l~~l~~g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~  157 (252)
                      .|++||.+....++.++|+||+||++|++++|..||.+.........+...   .|.                 .+    
T Consensus       181 ~y~~pE~~~~~~~~~~~Dv~slGvil~el~tg~~p~~~~~~~~~~~~~~~~---~~~-----------------~~----  236 (292)
T cd06657         181 YWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDN---LPP-----------------KL----  236 (292)
T ss_pred             cccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhh---CCc-----------------cc----
Confidence            899999998778889999999999999999999999865543332221110   000                 00    


Q ss_pred             cccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCCCCCHH
Q 025467          158 GAASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAR  237 (252)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~ta~  237 (252)
                                                                         ......+..+.+++.+||+.||.+|||+.
T Consensus       237 ---------------------------------------------------~~~~~~~~~l~~li~~~l~~~P~~R~~~~  265 (292)
T cd06657         237 ---------------------------------------------------KNLHKVSPSLKGFLDRLLVRDPAQRATAA  265 (292)
T ss_pred             ---------------------------------------------------CCcccCCHHHHHHHHHHHhCCcccCcCHH
Confidence                                                               00122345788999999999999999999


Q ss_pred             HHHcCCCCCCcc
Q 025467          238 EALRHPFFTRDH  249 (252)
Q Consensus       238 e~l~hpwf~~~~  249 (252)
                      ++++||||....
T Consensus       266 ~ll~~~~~~~~~  277 (292)
T cd06657         266 ELLKHPFLAKAG  277 (292)
T ss_pred             HHhcChHHhccC
Confidence            999999998764

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo

>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6

Probab=99.93  E-value=2.6e-26  Score=187.13  Aligned_cols=147  Identities=27%  Similarity=0.499  Sum_probs=105.4

Q ss_pred             Chhhhhcc-CccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCC--CCccccCC
Q 025467            1 MFAVMHDL-CMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD--QNYIVSTR   77 (252)
Q Consensus         1 aL~~lH~~-~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~--~~~~~~t~   77 (252)
                      ||+|||++ +++||||||+||+++.                           ...++|+|||.+......  .....++.
T Consensus       115 ~l~~lH~~~~i~h~dlkp~nil~~~---------------------------~~~~kl~dfg~~~~~~~~~~~~~~~~~~  167 (283)
T cd06617         115 ALEYLHSKLSVIHRDVKPSNVLINR---------------------------NGQVKLCDFGISGYLVDSVAKTIDAGCK  167 (283)
T ss_pred             HHHHHhhcCCeecCCCCHHHEEECC---------------------------CCCEEEeecccccccccccccccccCCc
Confidence            58999997 9999999999999944                           445677777776543221  12235778


Q ss_pred             Ccccchhhhc----CCCCccchhHhHHHHHHHHHhCCCCCCCCCh-HHHHHHHHHHhCCCchHHHHHhhHHHHHHhhcCC
Q 025467           78 HYRAPEVILG----LGWTYPCDIWSVGCILVELCTGEALFQTHEN-LEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGR  152 (252)
Q Consensus        78 ~y~aPE~l~~----~~~~~~~Diws~G~~l~~l~~g~~pf~~~~~-~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~  152 (252)
                      .|+|||.+.+    ..++.++|+||+||++|++++|..||..... .+.+.....  +.                    .
T Consensus       168 ~y~aPE~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~--~~--------------------~  225 (283)
T cd06617         168 PYMAPERINPELNQKGYDVKSDVWSLGITMIELATGRFPYDSWKTPFQQLKQVVE--EP--------------------S  225 (283)
T ss_pred             cccChhhcCCcccccccCccccchhhHHHHHHHHhCCCCCCccccCHHHHHHHHh--cC--------------------C
Confidence            8999998865    3467899999999999999999999864221 111111100  00                    0


Q ss_pred             CCCCccccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCC
Q 025467          153 LDWPEGAASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTD  232 (252)
Q Consensus       153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~  232 (252)
                      ...+                                                      ....+.++.+++.+||..+|.+
T Consensus       226 ~~~~------------------------------------------------------~~~~~~~l~~li~~~l~~~p~~  251 (283)
T cd06617         226 PQLP------------------------------------------------------AEKFSPEFQDFVNKCLKKNYKE  251 (283)
T ss_pred             CCCC------------------------------------------------------ccccCHHHHHHHHHHccCChhh
Confidence            0000                                                      0123468899999999999999


Q ss_pred             CCCHHHHHcCCCCCCccc
Q 025467          233 RLTAREALRHPFFTRDHL  250 (252)
Q Consensus       233 R~ta~e~l~hpwf~~~~~  250 (252)
                      |||+.++++||||.....
T Consensus       252 Rp~~~~il~~~~~~~~~~  269 (283)
T cd06617         252 RPNYPELLQHPFFELHLS  269 (283)
T ss_pred             CcCHHHHhcCchhhhccc
Confidence            999999999999998754

Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs

>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases

Probab=99.93  E-value=5.1e-26  Score=184.44  Aligned_cols=146  Identities=27%  Similarity=0.478  Sum_probs=103.4

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCC-----CCcccc
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD-----QNYIVS   75 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~-----~~~~~~   75 (252)
                      ||.|||++|++||||+|+||++..+                           ..++++|||.+......     .....+
T Consensus       120 ~l~~lH~~~i~H~dl~~~nil~~~~---------------------------~~~~l~d~~~~~~~~~~~~~~~~~~~~~  172 (272)
T cd06629         120 GLAYLHSKGILHRDLKADNLLVDAD---------------------------GICKISDFGISKKSDDIYDNDQNMSMQG  172 (272)
T ss_pred             HHHHHhhCCeeecCCChhhEEEcCC---------------------------CeEEEeeccccccccccccccccccccC
Confidence            6899999999999999999999544                           45666666665433221     112357


Q ss_pred             CCCcccchhhhcCC--CCccchhHhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHHHHHHhhcCCC
Q 025467           76 TRHYRAPEVILGLG--WTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRL  153 (252)
Q Consensus        76 t~~y~aPE~l~~~~--~~~~~Diws~G~~l~~l~~g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~  153 (252)
                      +..|+|||++....  ++.++|+||+|++++++++|..||..........   ....                  .....
T Consensus       173 ~~~y~~PE~~~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~---~~~~------------------~~~~~  231 (272)
T cd06629         173 SVFWMAPEVIHSYSQGYSAKVDIWSLGCVVLEMFAGRRPWSDEEAIAAMF---KLGN------------------KRSAP  231 (272)
T ss_pred             CccccCHHHhccccCCCCccchhHHHHHHHHHHHhCCCCCcCcchHHHHH---Hhhc------------------cccCC
Confidence            78899999987654  7899999999999999999999986443322111   1000                  00000


Q ss_pred             CCCccccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCCC
Q 025467          154 DWPEGAASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDR  233 (252)
Q Consensus       154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R  233 (252)
                      ..+.                                                   ......+..+.+++.+||..+|.+|
T Consensus       232 ~~~~---------------------------------------------------~~~~~~~~~~~~li~~~l~~~p~~R  260 (272)
T cd06629         232 PIPP---------------------------------------------------DVSMNLSPVALDFLNACFTINPDNR  260 (272)
T ss_pred             cCCc---------------------------------------------------cccccCCHHHHHHHHHHhcCChhhC
Confidence            0000                                                   0012345689999999999999999


Q ss_pred             CCHHHHHcCCCC
Q 025467          234 LTAREALRHPFF  245 (252)
Q Consensus       234 ~ta~e~l~hpwf  245 (252)
                      ||++++|+||||
T Consensus       261 ps~~~il~~~~~  272 (272)
T cd06629         261 PTARELLQHPFI  272 (272)
T ss_pred             CCHHHHhhCCCC
Confidence            999999999997

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte

>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors

Probab=99.93  E-value=3.7e-26  Score=190.95  Aligned_cols=89  Identities=27%  Similarity=0.421  Sum_probs=70.9

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCC-----Ccccc
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ-----NYIVS   75 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~-----~~~~~   75 (252)
                      ||+|||++||+||||||+|||++.+                           ..++|+|||++.......     ....+
T Consensus       185 aL~~lH~~~ivHrDikp~Nill~~~---------------------------~~vkL~DfG~a~~~~~~~~~~~~~~~~~  237 (337)
T cd05054         185 GMEFLASRKCIHRDLAARNILLSEN---------------------------NVVKICDFGLARDIYKDPDYVRKGDARL  237 (337)
T ss_pred             HHHHHHhCCeecCCCCcceEEEeCC---------------------------CcEEEeccccchhcccCcchhhccCCCC
Confidence            6899999999999999999999544                           346677777665432211     11244


Q ss_pred             CCCcccchhhhcCCCCccchhHhHHHHHHHHHh-CCCCCCCC
Q 025467           76 TRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTH  116 (252)
Q Consensus        76 t~~y~aPE~l~~~~~~~~~Diws~G~~l~~l~~-g~~pf~~~  116 (252)
                      +..|+|||++.+..++.++||||+||+++++++ |..||.+.
T Consensus       238 ~~~y~aPE~~~~~~~~~~~Di~SlGv~l~el~t~g~~p~~~~  279 (337)
T cd05054         238 PLKWMAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGV  279 (337)
T ss_pred             CccccCcHHhcCCCCCccccHHHHHHHHHHHHHcCCCCCCCC
Confidence            667999999999899999999999999999998 99999754

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto

>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins

Probab=99.93  E-value=5e-26  Score=187.82  Aligned_cols=145  Identities=27%  Similarity=0.429  Sum_probs=106.7

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCCCccccCCCcc
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYR   80 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~~~~~~t~~y~   80 (252)
                      ||.|||++||+||||+|+||+++.                           .+.++|+|||.+....... ...++..|+
T Consensus       127 ~L~~LH~~~i~H~dl~p~nIl~~~---------------------------~~~~kL~dfg~~~~~~~~~-~~~~~~~y~  178 (307)
T cd06607         127 GLAYLHSHERIHRDIKAGNILLTE---------------------------PGTVKLADFGSASLVSPAN-SFVGTPYWM  178 (307)
T ss_pred             HHHHHHHCCceecCCCcccEEECC---------------------------CCCEEEeecCcceecCCCC-CccCCcccc
Confidence            689999999999999999999944                           4457777887765443322 235778899


Q ss_pred             cchhhh---cCCCCccchhHhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHHHHHHhhcCCCCCCc
Q 025467           81 APEVIL---GLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPE  157 (252)
Q Consensus        81 aPE~l~---~~~~~~~~Diws~G~~l~~l~~g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~  157 (252)
                      |||++.   ...++.++||||+|+++|++++|..||.+.+.......+..  +..                    ...+ 
T Consensus       179 aPE~~~~~~~~~~~~~sDv~s~G~il~el~tg~~p~~~~~~~~~~~~~~~--~~~--------------------~~~~-  235 (307)
T cd06607         179 APEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQ--NDS--------------------PTLS-  235 (307)
T ss_pred             CceeeeccCCCCCCcccchHHHHHHHHHHHcCCCCCCCccHHHHHHHHhc--CCC--------------------CCCC-
Confidence            999875   34578899999999999999999999976543322211100  000                    0000 


Q ss_pred             cccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCCCCCHH
Q 025467          158 GAASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAR  237 (252)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~ta~  237 (252)
                                                                           ....+..+.++|.+||..||.+|||+.
T Consensus       236 -----------------------------------------------------~~~~~~~~~~li~~~l~~~p~~Rp~~~  262 (307)
T cd06607         236 -----------------------------------------------------SNDWSDYFRNFVDSCLQKIPQDRPSSE  262 (307)
T ss_pred             -----------------------------------------------------chhhCHHHHHHHHHHhcCChhhCcCHH
Confidence                                                                 011235789999999999999999999


Q ss_pred             HHHcCCCCCCcc
Q 025467          238 EALRHPFFTRDH  249 (252)
Q Consensus       238 e~l~hpwf~~~~  249 (252)
                      +++.||||....
T Consensus       263 ~il~~~~~~~~~  274 (307)
T cd06607         263 ELLKHRFVLRER  274 (307)
T ss_pred             HHhcChhhcccC
Confidence            999999998764

Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily

>KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms]

Probab=99.93  E-value=2.1e-26  Score=191.06  Aligned_cols=145  Identities=30%  Similarity=0.540  Sum_probs=116.2

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCCC--ccccCCC
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQN--YIVSTRH   78 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~~--~~~~t~~   78 (252)
                      |++|||++|||+|||||+|++++..|+                           +||.|||+|+.......  ..+||+-
T Consensus       532 AfeYLH~k~iIYRDLKPENllLd~~Gy---------------------------~KLVDFGFAKki~~g~KTwTFcGTpE  584 (732)
T KOG0614|consen  532 AFEYLHRKGIIYRDLKPENLLLDNRGY---------------------------LKLVDFGFAKKIGSGRKTWTFCGTPE  584 (732)
T ss_pred             HHHHHHhcCceeccCChhheeeccCCc---------------------------eEEeehhhHHHhccCCceeeecCCcc
Confidence            689999999999999999999965554                           67777777765444332  3589999


Q ss_pred             cccchhhhcCCCCccchhHhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHHHHHHhhcCCCCCCcc
Q 025467           79 YRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEG  158 (252)
Q Consensus        79 y~aPE~l~~~~~~~~~Diws~G~~l~~l~~g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~  158 (252)
                      |.|||++...+.+.++|.||+|+++|++++|.+||++.+.......|.+-...                     ..+|  
T Consensus       585 YVAPEIILnKGHD~avDyWaLGIli~ELL~G~pPFs~~dpmktYn~ILkGid~---------------------i~~P--  641 (732)
T KOG0614|consen  585 YVAPEIILNKGHDRAVDYWALGILIYELLTGSPPFSGVDPMKTYNLILKGIDK---------------------IEFP--  641 (732)
T ss_pred             cccchhhhccCcchhhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHhhhhh---------------------hhcc--
Confidence            99999999999999999999999999999999999988766555444332211                     1111  


Q ss_pred             ccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCCCCC---
Q 025467          159 AASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLT---  235 (252)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~t---  235 (252)
                                                                           ..++..+.+|++++-..+|.+|..   
T Consensus       642 -----------------------------------------------------r~I~k~a~~Lik~LCr~~P~ERLG~~~  668 (732)
T KOG0614|consen  642 -----------------------------------------------------RRITKTATDLIKKLCRDNPTERLGYQK  668 (732)
T ss_pred             -----------------------------------------------------cccchhHHHHHHHHHhcCcHhhhcccc
Confidence                                                                 234568899999999999999987   


Q ss_pred             --HHHHHcCCCCCCc
Q 025467          236 --AREALRHPFFTRD  248 (252)
Q Consensus       236 --a~e~l~hpwf~~~  248 (252)
                        ..++-+|-||...
T Consensus       669 ~gI~DIkkH~Wf~gf  683 (732)
T KOG0614|consen  669 GGINDIKKHRWFEGF  683 (732)
T ss_pred             CChHHHHhhhhhhcC
Confidence              9999999999864

>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase

Probab=99.93  E-value=3e-26  Score=184.98  Aligned_cols=147  Identities=29%  Similarity=0.489  Sum_probs=106.5

Q ss_pred             Chhhhhc-cCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCC-CccccCCC
Q 025467            1 MFAVMHD-LCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ-NYIVSTRH   78 (252)
Q Consensus         1 aL~~lH~-~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~-~~~~~t~~   78 (252)
                      ||+|||+ .|++|+||+|+||+++.                           .+.++|+|||.+....... ....++..
T Consensus       112 ~l~~lH~~~~i~H~dl~~~ni~~~~---------------------------~~~~~l~d~g~~~~~~~~~~~~~~~~~~  164 (265)
T cd06605         112 GLTYLHEKHKIIHRDVKPSNILVNS---------------------------RGQIKLCDFGVSGQLVNSLAKTFVGTSS  164 (265)
T ss_pred             HHHHHcCCCCeecCCCCHHHEEECC---------------------------CCCEEEeecccchhhHHHHhhcccCChh
Confidence            5899999 99999999999999944                           4457788888765432211 11467788


Q ss_pred             cccchhhhcCCCCccchhHhHHHHHHHHHhCCCCCCCCCh--HHHHHHHHHHhCCCchHHHHHhhHHHHHHhhcCCCCCC
Q 025467           79 YRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHEN--LEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWP  156 (252)
Q Consensus        79 y~aPE~l~~~~~~~~~Diws~G~~l~~l~~g~~pf~~~~~--~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~  156 (252)
                      |+|||.+.+..++.++|+||+||+++++++|..||.....  ......+.......                   ....+
T Consensus       165 y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~-------------------~~~~~  225 (265)
T cd06605         165 YMAPERIQGNDYSVKSDIWSLGLSLIELATGRFPYPPENDPPDGIFELLQYIVNEP-------------------PPRLP  225 (265)
T ss_pred             ccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCccccccccHHHHHHHHhcCC-------------------CCCCC
Confidence            9999999888899999999999999999999999865421  01111111111000                   00000


Q ss_pred             ccccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCCCCCH
Q 025467          157 EGAASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTA  236 (252)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~ta  236 (252)
                                                                            ....+.++.++|.+||..||++|||+
T Consensus       226 ------------------------------------------------------~~~~~~~~~~li~~~l~~~p~~Rpt~  251 (265)
T cd06605         226 ------------------------------------------------------SGKFSPDFQDFVNLCLIKDPRERPSY  251 (265)
T ss_pred             ------------------------------------------------------hhhcCHHHHHHHHHHcCCCchhCcCH
Confidence                                                                  00145689999999999999999999


Q ss_pred             HHHHcCCCCCC
Q 025467          237 REALRHPFFTR  247 (252)
Q Consensus       237 ~e~l~hpwf~~  247 (252)
                      .+++.||||++
T Consensus       252 ~~ll~~~~~~~  262 (265)
T cd06605         252 KELLEHPFIKK  262 (265)
T ss_pred             HHHhhCchhhc
Confidence            99999999975

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity

>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4

Probab=99.93  E-value=4.1e-26  Score=185.58  Aligned_cols=147  Identities=28%  Similarity=0.423  Sum_probs=107.4

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCC---CCccccCC
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD---QNYIVSTR   77 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~---~~~~~~t~   77 (252)
                      ||+|||+.+++|+||+|+||+++.++                           .++++|||.+......   .....++.
T Consensus       113 ~l~~lh~~~ivH~dl~p~Nil~~~~~---------------------------~~~l~dfg~~~~~~~~~~~~~~~~~~~  165 (277)
T cd06640         113 GLDYLHSEKKIHRDIKAANVLLSEQG---------------------------DVKLADFGVAGQLTDTQIKRNTFVGTP  165 (277)
T ss_pred             HHHHHHhCCccCcCCChhhEEEcCCC---------------------------CEEEcccccceeccCCccccccccCcc
Confidence            58999999999999999999995544                           4566666665432221   11235677


Q ss_pred             CcccchhhhcCCCCccchhHhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHHHHHHhhcCCCCCCc
Q 025467           78 HYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPE  157 (252)
Q Consensus        78 ~y~aPE~l~~~~~~~~~Diws~G~~l~~l~~g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~  157 (252)
                      .|+|||++.+..++.++|+||+||++|++++|..||...........+.                       .+..    
T Consensus       166 ~y~apE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~-----------------------~~~~----  218 (277)
T cd06640         166 FWMAPEVIQQSAYDSKADIWSLGITAIELAKGEPPNSDMHPMRVLFLIP-----------------------KNNP----  218 (277)
T ss_pred             cccCHhHhccCCCccHHHHHHHHHHHHHHHHCCCCCCCcChHhHhhhhh-----------------------cCCC----
Confidence            8999999988888999999999999999999999987544322211100                       0000    


Q ss_pred             cccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCCCCCHH
Q 025467          158 GAASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAR  237 (252)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~ta~  237 (252)
                                                                        .......+..+.+++.+||+.+|++|||++
T Consensus       219 --------------------------------------------------~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~  248 (277)
T cd06640         219 --------------------------------------------------PTLTGEFSKPFKEFIDACLNKDPSFRPTAK  248 (277)
T ss_pred             --------------------------------------------------CCCchhhhHHHHHHHHHHcccCcccCcCHH
Confidence                                                              000112345788999999999999999999


Q ss_pred             HHHcCCCCCCcccc
Q 025467          238 EALRHPFFTRDHLR  251 (252)
Q Consensus       238 e~l~hpwf~~~~~~  251 (252)
                      +++.||||.....+
T Consensus       249 ~il~~~~~~~~~~~  262 (277)
T cd06640         249 ELLKHKFIVKNAKK  262 (277)
T ss_pred             HHHhChHhhhcchh
Confidence            99999999877653

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter

>PHA02882 putative serine/threonine kinase; Provisional

Probab=99.93  E-value=9e-26  Score=185.26  Aligned_cols=90  Identities=19%  Similarity=0.242  Sum_probs=72.9

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCC----------CC
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERP----------DQ   70 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~----------~~   70 (252)
                      ||+|||+.+|+||||||+|||++..                           ..++|+|||+++....          ..
T Consensus       138 ~l~~lH~~~iiHrDiKp~Nill~~~---------------------------~~~~l~DFGla~~~~~~~~~~~~~~~~~  190 (294)
T PHA02882        138 TLEYIHEHGISHGDIKPENIMVDGN---------------------------NRGYIIDYGIASHFIIHGKHIEYSKEQK  190 (294)
T ss_pred             HHHHHHhCCeecCCCCHHHEEEcCC---------------------------CcEEEEEcCCceeeccCCcccccccccc
Confidence            6899999999999999999999543                           3456666666643211          11


Q ss_pred             CccccCCCcccchhhhcCCCCccchhHhHHHHHHHHHhCCCCCCCCC
Q 025467           71 NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHE  117 (252)
Q Consensus        71 ~~~~~t~~y~aPE~l~~~~~~~~~Diws~G~~l~~l~~g~~pf~~~~  117 (252)
                      ....||+.|+|||+..+..++.++||||+||+++++++|..||.+..
T Consensus       191 ~~~~gt~~y~ape~~~~~~~~~~~DiwSlG~~l~el~~g~~P~~~~~  237 (294)
T PHA02882        191 DLHRGTLYYAGLDAHNGACVTRRGDLESLGYCMLKWAGIKLPWKGFG  237 (294)
T ss_pred             cccCCCccccCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCccc
Confidence            12368999999999998889999999999999999999999998763

>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases

Probab=99.93  E-value=7.5e-26  Score=182.24  Aligned_cols=144  Identities=26%  Similarity=0.459  Sum_probs=103.5

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCC---CCccccCC
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD---QNYIVSTR   77 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~---~~~~~~t~   77 (252)
                      ||+|||++||+|+||+|+||+++.++                           .++++|||.+......   .....++.
T Consensus       113 ~l~~lh~~~i~h~dl~p~ni~i~~~~---------------------------~~~l~d~g~~~~~~~~~~~~~~~~~~~  165 (262)
T cd06613         113 GLAYLHETGKIHRDIKGANILLTEDG---------------------------DVKLADFGVSAQLTATIAKRKSFIGTP  165 (262)
T ss_pred             HHHHHHhCCceecCCChhhEEECCCC---------------------------CEEECccccchhhhhhhhccccccCCc
Confidence            58999999999999999999995443                           4666676665433221   12235778


Q ss_pred             CcccchhhhcC---CCCccchhHhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHHHHHHhhcCCCC
Q 025467           78 HYRAPEVILGL---GWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLD  154 (252)
Q Consensus        78 ~y~aPE~l~~~---~~~~~~Diws~G~~l~~l~~g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~  154 (252)
                      .|+|||.+...   .++.++|+||+||++|+|++|..||...+.......+...                       .+.
T Consensus       166 ~y~~Pe~~~~~~~~~~~~~~Di~slG~~l~~~~tg~~p~~~~~~~~~~~~~~~~-----------------------~~~  222 (262)
T cd06613         166 YWMAPEVAAVERKGGYDGKCDIWALGITAIELAELQPPMFDLHPMRALFLISKS-----------------------NFP  222 (262)
T ss_pred             cccCchhhcccccCCcCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhc-----------------------cCC
Confidence            89999999776   7888999999999999999999999765543322211110                       000


Q ss_pred             CCccccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCCCC
Q 025467          155 WPEGAASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRL  234 (252)
Q Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~  234 (252)
                      .+.                                                  .......+.++.+++.+||..+|..||
T Consensus       223 ~~~--------------------------------------------------~~~~~~~~~~~~~li~~~l~~~p~~Rp  252 (262)
T cd06613         223 PPK--------------------------------------------------LKDKEKWSPVFHDFIKKCLTKDPKKRP  252 (262)
T ss_pred             Ccc--------------------------------------------------ccchhhhhHHHHHHHHHHcCCChhhCC
Confidence            000                                                  000012245789999999999999999


Q ss_pred             CHHHHHcCCC
Q 025467          235 TAREALRHPF  244 (252)
Q Consensus       235 ta~e~l~hpw  244 (252)
                      |+.+++.|||
T Consensus       253 t~~~il~~~~  262 (262)
T cd06613         253 TATKLLQHPF  262 (262)
T ss_pred             CHHHHhcCCC
Confidence            9999999998

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ

>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases

Probab=99.93  E-value=9.6e-26  Score=184.38  Aligned_cols=89  Identities=30%  Similarity=0.524  Sum_probs=71.7

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCC-CccccCCCc
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ-NYIVSTRHY   79 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~-~~~~~t~~y   79 (252)
                      ||+|||+.|++|+||+|+||++..+                           ..++++|||.+....... ....++..|
T Consensus       117 ~L~~lH~~~i~H~dl~~~nil~~~~---------------------------~~~~l~dfg~~~~~~~~~~~~~~~~~~y  169 (287)
T cd06621         117 GLSYLHSRKIIHRDIKPSNILLTRK---------------------------GQVKLCDFGVSGELVNSLAGTFTGTSFY  169 (287)
T ss_pred             HHHHHHHCCcccCCCCHHHEEEecC---------------------------CeEEEeeccccccccccccccccCCccc
Confidence            6899999999999999999999544                           346777777664332211 123567789


Q ss_pred             ccchhhhcCCCCccchhHhHHHHHHHHHhCCCCCCCC
Q 025467           80 RAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTH  116 (252)
Q Consensus        80 ~aPE~l~~~~~~~~~Diws~G~~l~~l~~g~~pf~~~  116 (252)
                      +|||.+.+..++.++|+||+||++|++++|..||...
T Consensus       170 ~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~  206 (287)
T cd06621         170 MAPERIQGKPYSITSDVWSLGLTLLEVAQNRFPFPPE  206 (287)
T ss_pred             cCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCcc
Confidence            9999998888999999999999999999999999754

Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2

Probab=99.93  E-value=9.2e-26  Score=181.76  Aligned_cols=141  Identities=27%  Similarity=0.524  Sum_probs=105.3

Q ss_pred             Chhhhh-----ccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCC---Cc
Q 025467            1 MFAVMH-----DLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ---NY   72 (252)
Q Consensus         1 aL~~lH-----~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~---~~   72 (252)
                      ||+|||     +.+++|+||+|+||+++.+                           +.++++|||.+.......   ..
T Consensus       117 ~l~~lH~~~~~~~~i~h~dl~p~nili~~~---------------------------~~~kl~d~g~~~~~~~~~~~~~~  169 (265)
T cd08217         117 ALYECHNRSDPGNTVLHRDLKPANIFLDAN---------------------------NNVKLGDFGLAKILGHDSSFAKT  169 (265)
T ss_pred             HHHHHhcCccccCcceecCCCHHHEEEecC---------------------------CCEEEecccccccccCCcccccc
Confidence            688999     8999999999999999544                           456677777665433222   12


Q ss_pred             cccCCCcccchhhhcCCCCccchhHhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHHHHHHhhcCC
Q 025467           73 IVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGR  152 (252)
Q Consensus        73 ~~~t~~y~aPE~l~~~~~~~~~Diws~G~~l~~l~~g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~  152 (252)
                      ..++..|+|||.+.+..++.++|+||+|++++++++|..||...+.......+.                       .+.
T Consensus       170 ~~~~~~~~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~-----------------------~~~  226 (265)
T cd08217         170 YVGTPYYMSPEQLNHMSYDEKSDIWSLGCLIYELCALSPPFTARNQLQLASKIK-----------------------EGK  226 (265)
T ss_pred             cccCCCccChhhhcCCCCCchhHHHHHHHHHHHHHHCCCcccCcCHHHHHHHHh-----------------------cCC
Confidence            357888999999988888899999999999999999999998655322211110                       000


Q ss_pred             CCCCccccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCC
Q 025467          153 LDWPEGAASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTD  232 (252)
Q Consensus       153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~  232 (252)
                      ..                                                      ......+..+.+++.+||+.+|.+
T Consensus       227 ~~------------------------------------------------------~~~~~~~~~~~~l~~~~l~~~p~~  252 (265)
T cd08217         227 FR------------------------------------------------------RIPYRYSSELNEVIKSMLNVDPDK  252 (265)
T ss_pred             CC------------------------------------------------------CCccccCHHHHHHHHHHccCCccc
Confidence            00                                                      000123468899999999999999


Q ss_pred             CCCHHHHHcCCCC
Q 025467          233 RLTAREALRHPFF  245 (252)
Q Consensus       233 R~ta~e~l~hpwf  245 (252)
                      |||+.++++|||+
T Consensus       253 Rp~~~~il~~~~~  265 (265)
T cd08217         253 RPSTEELLQLPLI  265 (265)
T ss_pred             CCCHHHHhhCCCC
Confidence            9999999999996

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi

>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1

Probab=99.93  E-value=8.8e-26  Score=181.36  Aligned_cols=142  Identities=30%  Similarity=0.489  Sum_probs=104.1

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCC--CccccCCC
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ--NYIVSTRH   78 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~--~~~~~t~~   78 (252)
                      ||+|||+.||+|+||+|+||+++.+                           ..++|+|||.+.......  ....++..
T Consensus       114 ~l~~lH~~~i~H~dl~~~ni~~~~~---------------------------~~~kl~d~~~~~~~~~~~~~~~~~~~~~  166 (258)
T cd06632         114 GLEYLHDRNTVHRDIKGANILVDTN---------------------------GVVKLADFGMAKQVVEFSFAKSFKGSPY  166 (258)
T ss_pred             HHHHHHHCCcccCCCCHHHEEECCC---------------------------CCEEEccCccceeccccccccccCCCcc
Confidence            5899999999999999999999544                           456677776655432221  23457888


Q ss_pred             cccchhhhcCC-CCccchhHhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHHHHHHhhcCCCCCCc
Q 025467           79 YRAPEVILGLG-WTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPE  157 (252)
Q Consensus        79 y~aPE~l~~~~-~~~~~Diws~G~~l~~l~~g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~  157 (252)
                      |++||.+.... ++.++|+||+||++|++++|..||...........+... +.                     .    
T Consensus       167 y~~pe~~~~~~~~~~~~D~~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~-~~---------------------~----  220 (258)
T cd06632         167 WMAPEVIAQQGGYGLAADIWSLGCTVLEMATGKPPWSQLEGVAAVFKIGRS-KE---------------------L----  220 (258)
T ss_pred             eeCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcccCcHHHHHHHHHhc-cc---------------------C----
Confidence            99999987766 889999999999999999999999754432222111000 00                     0    


Q ss_pred             cccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCCCCCHH
Q 025467          158 GAASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAR  237 (252)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~ta~  237 (252)
                                                                        .......+..+.+++.+||..+|.+|||++
T Consensus       221 --------------------------------------------------~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~  250 (258)
T cd06632         221 --------------------------------------------------PPIPDHLSDEAKDFILKCLQRDPSLRPTAA  250 (258)
T ss_pred             --------------------------------------------------CCcCCCcCHHHHHHHHHHhhcCcccCcCHH
Confidence                                                              000122346889999999999999999999


Q ss_pred             HHHcCCCC
Q 025467          238 EALRHPFF  245 (252)
Q Consensus       238 e~l~hpwf  245 (252)
                      +++.|||+
T Consensus       251 ~~l~~~~~  258 (258)
T cd06632         251 ELLEHPFV  258 (258)
T ss_pred             HHhcCCCC
Confidence            99999997

Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops

>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins

Probab=99.93  E-value=7.1e-26  Score=182.43  Aligned_cols=145  Identities=37%  Similarity=0.627  Sum_probs=106.8

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCC-----------
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD-----------   69 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~-----------   69 (252)
                      ||+|||+.|++|+||+|+||+++.++                           .++++|||.+......           
T Consensus       105 ~L~~lH~~~i~H~di~~~nil~~~~~---------------------------~~~l~dfg~~~~~~~~~~~~~~~~~~~  157 (265)
T cd05579         105 ALEYLHSNGIIHRDLKPDNILIDSNG---------------------------HLKLTDFGLSKVGLVRRQINLNDDEKE  157 (265)
T ss_pred             HHHHHHHcCeecCCCCHHHeEEcCCC---------------------------CEEEEecccchhcccCccccccccccc
Confidence            58999999999999999999996554                           4555566554432211           


Q ss_pred             CCccccCCCcccchhhhcCCCCccchhHhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHHHHHHhh
Q 025467           70 QNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVR  149 (252)
Q Consensus        70 ~~~~~~t~~y~aPE~l~~~~~~~~~Diws~G~~l~~l~~g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~  149 (252)
                      .....++..|++||......++.++|+||+|++++++++|..||...........+..                      
T Consensus       158 ~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~----------------------  215 (265)
T cd05579         158 DKRIVGTPDYIAPEVILGQGHSKTVDWWSLGCILYEFLVGIPPFHGETPEEIFQNILN----------------------  215 (265)
T ss_pred             ccCcccCccccCHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhc----------------------
Confidence            1223567789999999887888999999999999999999999976554333222111                      


Q ss_pred             cCCCCCCccccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCC
Q 025467          150 RGRLDWPEGAASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYD  229 (252)
Q Consensus       150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~d  229 (252)
                       +...++..                                                     ...+..+.+++.+||+.+
T Consensus       216 -~~~~~~~~-----------------------------------------------------~~~~~~~~~~i~~~l~~~  241 (265)
T cd05579         216 -GKIEWPED-----------------------------------------------------VEVSDEAIDLISKLLVPD  241 (265)
T ss_pred             -CCcCCCcc-----------------------------------------------------ccCCHHHHHHHHHHhcCC
Confidence             11111110                                                     012468899999999999


Q ss_pred             CCCCCCH---HHHHcCCCCCCc
Q 025467          230 PTDRLTA---REALRHPFFTRD  248 (252)
Q Consensus       230 P~~R~ta---~e~l~hpwf~~~  248 (252)
                      |.+|||+   .++|+||||++.
T Consensus       242 p~~Rpt~~~~~~~l~~~~~~~~  263 (265)
T cd05579         242 PEKRLGAKSIEEIKNHPFFKGI  263 (265)
T ss_pred             HhhcCCCccHHHHhcCccccCC
Confidence            9999999   999999999864

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re

>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2

Probab=99.93  E-value=9.5e-26  Score=186.29  Aligned_cols=145  Identities=30%  Similarity=0.460  Sum_probs=105.4

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCCCccccCCCcc
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYR   80 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~~~~~~t~~y~   80 (252)
                      ||.|||+.+++||||+|+||+++.+                           +.++++|||.+...... ....++..|+
T Consensus       127 ~l~~LH~~~i~H~dl~p~nil~~~~---------------------------~~~kl~dfg~~~~~~~~-~~~~~~~~y~  178 (308)
T cd06634         127 GLAYLHSHNMIHRDVKAGNILLSEP---------------------------GLVKLGDFGSASIMAPA-NXFVGTPYWM  178 (308)
T ss_pred             HHHHHHhCCcccCCCCHHhEEECCC---------------------------CcEEECCcccceeecCc-ccccCCcccc
Confidence            5899999999999999999999543                           45667777766543322 2235788899


Q ss_pred             cchhhhc---CCCCccchhHhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHHHHHHhhcCCCCCCc
Q 025467           81 APEVILG---LGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPE  157 (252)
Q Consensus        81 aPE~l~~---~~~~~~~Diws~G~~l~~l~~g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~  157 (252)
                      |||.+.+   ..++.++||||+||++|++++|..||...+.......+..  +..|                    ..  
T Consensus       179 aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~--~~~~--------------------~~--  234 (308)
T cd06634         179 APEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQ--NESP--------------------AL--  234 (308)
T ss_pred             CHHHHhhcccCCCCcccchHHHHHHHHHHHcCCCCCccccHHHHHHHHhh--cCCC--------------------Cc--
Confidence            9999853   4578899999999999999999999865433222221111  0000                    00  


Q ss_pred             cccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCCCCCHH
Q 025467          158 GAASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAR  237 (252)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~ta~  237 (252)
                                                                          .....+..+.+||.+||+.+|++|||+.
T Consensus       235 ----------------------------------------------------~~~~~~~~~~~li~~cl~~~P~~Rp~~~  262 (308)
T cd06634         235 ----------------------------------------------------QSGHWSEYFRNFVDSCLQKIPQDRPTSE  262 (308)
T ss_pred             ----------------------------------------------------CcccccHHHHHHHHHHhhCCcccCCCHH
Confidence                                                                0012345789999999999999999999


Q ss_pred             HHHcCCCCCCcc
Q 025467          238 EALRHPFFTRDH  249 (252)
Q Consensus       238 e~l~hpwf~~~~  249 (252)
                      ++++|||+....
T Consensus       263 ~ll~~~~~~~~~  274 (308)
T cd06634         263 VLLKHRFVLRER  274 (308)
T ss_pred             HHhhCccccccC
Confidence            999999998764

Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin

>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9

Probab=99.93  E-value=1.1e-25  Score=180.80  Aligned_cols=141  Identities=30%  Similarity=0.541  Sum_probs=105.3

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCC---CccccCC
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ---NYIVSTR   77 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~---~~~~~t~   77 (252)
                      ||+|||+.|++|+||+|+||+++.++                           .++++|||.+.......   ....+++
T Consensus       113 ~l~~lh~~~i~h~dl~p~ni~~~~~~---------------------------~~kl~d~~~~~~~~~~~~~~~~~~~~~  165 (256)
T cd08221         113 AVSYIHKAGILHRDIKTLNIFLTKAG---------------------------LIKLGDFGISKILGSEYSMAETVVGTP  165 (256)
T ss_pred             HHHHHHhCCccccCCChHhEEEeCCC---------------------------CEEECcCcceEEcccccccccccCCCc
Confidence            58899999999999999999995544                           45666666654332221   2246788


Q ss_pred             CcccchhhhcCCCCccchhHhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHHHHHHhhcCCCCCCc
Q 025467           78 HYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPE  157 (252)
Q Consensus        78 ~y~aPE~l~~~~~~~~~Diws~G~~l~~l~~g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~  157 (252)
                      .|+|||.+.+..++.++|+||+||+++++++|..||......+....+..  +..+.                       
T Consensus       166 ~y~ape~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~--~~~~~-----------------------  220 (256)
T cd08221         166 YYMSPELCQGVKYNFKSDIWALGCVLYELLTLKRTFDATNPLNLVVKIVQ--GNYTP-----------------------  220 (256)
T ss_pred             cccCHhhcCCCCCCCcchhHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHc--CCCCC-----------------------
Confidence            99999999887888999999999999999999999976544333322211  11000                       


Q ss_pred             cccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCCCCCHH
Q 025467          158 GAASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAR  237 (252)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~ta~  237 (252)
                                                                          .....+..+.+++.+||..+|.+|||++
T Consensus       221 ----------------------------------------------------~~~~~~~~~~~~i~~~l~~~p~~R~s~~  248 (256)
T cd08221         221 ----------------------------------------------------VVSVYSSELISLVHSLLQQDPEKRPTAD  248 (256)
T ss_pred             ----------------------------------------------------CccccCHHHHHHHHHHcccCcccCCCHH
Confidence                                                                0022346889999999999999999999


Q ss_pred             HHHcCCCC
Q 025467          238 EALRHPFF  245 (252)
Q Consensus       238 e~l~hpwf  245 (252)
                      ++++|||+
T Consensus       249 ~ll~~~~l  256 (256)
T cd08221         249 EVLDQPLL  256 (256)
T ss_pred             HHhhCcCC
Confidence            99999996

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa

>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1

Probab=99.93  E-value=4.2e-26  Score=185.48  Aligned_cols=144  Identities=31%  Similarity=0.465  Sum_probs=104.6

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCC---CccccCC
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ---NYIVSTR   77 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~---~~~~~t~   77 (252)
                      ||.|||++|++|+||+|+||++..++                           .++++|||.+.......   ....++.
T Consensus       113 ~l~~lH~~~ivH~dl~p~ni~i~~~~---------------------------~~~l~dfg~~~~~~~~~~~~~~~~~~~  165 (277)
T cd06642         113 GLDYLHSERKIHRDIKAANVLLSEQG---------------------------DVKLADFGVAGQLTDTQIKRNTFVGTP  165 (277)
T ss_pred             HHHHHhcCCeeccCCChheEEEeCCC---------------------------CEEEccccccccccCcchhhhcccCcc
Confidence            68999999999999999999995544                           45666666654322211   1235677


Q ss_pred             CcccchhhhcCCCCccchhHhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHHHHHHhhcCCCCCCc
Q 025467           78 HYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPE  157 (252)
Q Consensus        78 ~y~aPE~l~~~~~~~~~Diws~G~~l~~l~~g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~  157 (252)
                      .|+|||.+.+..++.++|+||+||+++++++|..||...........+                       ..+..  + 
T Consensus       166 ~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~-----------------------~~~~~--~-  219 (277)
T cd06642         166 FWMAPEVIKQSAYDFKADIWSLGITAIELAKGEPPNSDLHPMRVLFLI-----------------------PKNSP--P-  219 (277)
T ss_pred             cccCHHHhCcCCCchhhhHHHHHHHHHHHHhCCCCCcccchhhHHhhh-----------------------hcCCC--C-
Confidence            899999998888899999999999999999999998643322111100                       00000  0 


Q ss_pred             cccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCCCCCHH
Q 025467          158 GAASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAR  237 (252)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~ta~  237 (252)
                                                                         ......+.++.+++.+||+.+|++|||+.
T Consensus       220 ---------------------------------------------------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~  248 (277)
T cd06642         220 ---------------------------------------------------TLEGQYSKPFKEFVEACLNKDPRFRPTAK  248 (277)
T ss_pred             ---------------------------------------------------CCCcccCHHHHHHHHHHccCCcccCcCHH
Confidence                                                               00012345789999999999999999999


Q ss_pred             HHHcCCCCCCc
Q 025467          238 EALRHPFFTRD  248 (252)
Q Consensus       238 e~l~hpwf~~~  248 (252)
                      ++++||||...
T Consensus       249 ~il~~~~~~~~  259 (277)
T cd06642         249 ELLKHKFITRY  259 (277)
T ss_pred             HHHHhHHHHHH
Confidence            99999999753

Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25

>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase

Probab=99.93  E-value=2.4e-26  Score=188.52  Aligned_cols=147  Identities=29%  Similarity=0.490  Sum_probs=107.1

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCC---CccccCC
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ---NYIVSTR   77 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~---~~~~~t~   77 (252)
                      ||+|||++|++|+||+|+||++..++                           .++|+|||.+.......   ....++.
T Consensus       127 al~~LH~~gi~H~dL~p~Nili~~~~---------------------------~~kL~dfg~~~~~~~~~~~~~~~~~~~  179 (293)
T cd06647         127 ALEFLHSNQVIHRDIKSDNILLGMDG---------------------------SVKLTDFGFCAQITPEQSKRSTMVGTP  179 (293)
T ss_pred             HHHHHHhCCEeeccCCHHHEEEcCCC---------------------------CEEEccCcceecccccccccccccCCh
Confidence            68999999999999999999995443                           46666776554332211   1235778


Q ss_pred             CcccchhhhcCCCCccchhHhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHHHHHHhhcCCCCCCc
Q 025467           78 HYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPE  157 (252)
Q Consensus        78 ~y~aPE~l~~~~~~~~~Diws~G~~l~~l~~g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~  157 (252)
                      .|++||.+....++.++|+||+||++|++++|..||...+.......+.. .+.                     ...  
T Consensus       180 ~y~~PE~~~~~~~~~~~Dv~slG~ll~~ll~g~~pf~~~~~~~~~~~~~~-~~~---------------------~~~--  235 (293)
T cd06647         180 YWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIAT-NGT---------------------PEL--  235 (293)
T ss_pred             hhcCchhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChhhheeehhc-CCC---------------------CCC--
Confidence            89999999888889999999999999999999999976543222111000 000                     000  


Q ss_pred             cccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCCCCCHH
Q 025467          158 GAASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAR  237 (252)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~ta~  237 (252)
                                                                         ......+..+.+++.+||+.+|++|||++
T Consensus       236 ---------------------------------------------------~~~~~~~~~l~~li~~~l~~~p~~Rp~~~  264 (293)
T cd06647         236 ---------------------------------------------------QNPEKLSAIFRDFLNRCLEMDVEKRGSAK  264 (293)
T ss_pred             ---------------------------------------------------CCccccCHHHHHHHHHHccCChhhCcCHH
Confidence                                                               00122345789999999999999999999


Q ss_pred             HHHcCCCCCCcc
Q 025467          238 EALRHPFFTRDH  249 (252)
Q Consensus       238 e~l~hpwf~~~~  249 (252)
                      +++.||||+...
T Consensus       265 ~il~h~~~~~~~  276 (293)
T cd06647         265 ELLQHPFLKIAK  276 (293)
T ss_pred             HHhcCHHHhcCc
Confidence            999999998654

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi

>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases

Probab=99.93  E-value=1.3e-25  Score=179.27  Aligned_cols=142  Identities=30%  Similarity=0.516  Sum_probs=106.1

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCC--CccccCCC
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ--NYIVSTRH   78 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~--~~~~~t~~   78 (252)
                      ||++||+.|++|+||+|+||+++.                           .+.++|+|||.+.......  ....++..
T Consensus       110 ~l~~lh~~~i~h~dl~p~ni~i~~---------------------------~~~~~l~d~~~~~~~~~~~~~~~~~~~~~  162 (253)
T cd05122         110 GLEYLHSNGIIHRDIKAANILLTS---------------------------DGEVKLIDFGLSAQLSDTKARNTMVGTPY  162 (253)
T ss_pred             HHHHhhcCCEecCCCCHHHEEEcc---------------------------CCeEEEeeccccccccccccccceecCCc
Confidence            589999999999999999999944                           4456777777765543332  33467888


Q ss_pred             cccchhhhcCCCCccchhHhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHHHHHHhhcCCCCCCcc
Q 025467           79 YRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEG  158 (252)
Q Consensus        79 y~aPE~l~~~~~~~~~Diws~G~~l~~l~~g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~  158 (252)
                      |++||.+.+..++.++|+||+|++++++++|..||...+.......+..  ...                    ...+. 
T Consensus       163 ~~~PE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~--~~~--------------------~~~~~-  219 (253)
T cd05122         163 WMAPEVINGKPYDYKADIWSLGITAIELAEGKPPYSELPPMKALFKIAT--NGP--------------------PGLRN-  219 (253)
T ss_pred             ccCHHHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHh--cCC--------------------CCcCc-
Confidence            9999999888888999999999999999999999976543332222111  000                    00000 


Q ss_pred             ccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCCCCCHHH
Q 025467          159 AASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTARE  238 (252)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~ta~e  238 (252)
                                                                          ....+..+.+++.+||+.||.+|||+.+
T Consensus       220 ----------------------------------------------------~~~~~~~~~~~i~~~l~~~p~~R~t~~~  247 (253)
T cd05122         220 ----------------------------------------------------PEKWSDEFKDFLKKCLQKNPEKRPTAEQ  247 (253)
T ss_pred             ----------------------------------------------------ccccCHHHHHHHHHHccCChhhCCCHHH
Confidence                                                                0112458899999999999999999999


Q ss_pred             HHcCCC
Q 025467          239 ALRHPF  244 (252)
Q Consensus       239 ~l~hpw  244 (252)
                      +++|||
T Consensus       248 ~l~~~~  253 (253)
T cd05122         248 LLKHPF  253 (253)
T ss_pred             HhcCCC
Confidence            999999

Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core

>KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms]

Probab=99.93  E-value=2.7e-27  Score=185.24  Aligned_cols=147  Identities=25%  Similarity=0.433  Sum_probs=110.5

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCC---CCccccCC
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD---QNYIVSTR   77 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~---~~~~~~t~   77 (252)
                      +|+|||...=+|||||+.|||++.++                           ..||+|||.|-.....   .....||+
T Consensus       141 GL~YLH~~~KIHRDIKAGNILLNT~G---------------------------~AKLADFGVAGQLTDTMAKRNTVIGTP  193 (502)
T KOG0574|consen  141 GLQYLHDLKKIHRDIKAGNILLNTDG---------------------------IAKLADFGVAGQLTDTMAKRNTVIGTP  193 (502)
T ss_pred             HHHHHHHHHHHHhhcccccEEEcccc---------------------------hhhhhhccccchhhhhHHhhCccccCc
Confidence            58999999999999999999995555                           4555555555433222   23468999


Q ss_pred             CcccchhhhcCCCCccchhHhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHHHHHHhhcCCCCCCc
Q 025467           78 HYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPE  157 (252)
Q Consensus        78 ~y~aPE~l~~~~~~~~~Diws~G~~l~~l~~g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~  157 (252)
                      .|||||++..-+|+..+||||+|++..+|..|++||........+.   -+--.+|.                       
T Consensus       194 FWMAPEVI~EIGY~~~ADIWSLGITaIEMAEG~PPYsDIHPMRAIF---MIPT~PPP-----------------------  247 (502)
T KOG0574|consen  194 FWMAPEVIEEIGYDTKADIWSLGITAIEMAEGRPPYSDIHPMRAIF---MIPTKPPP-----------------------  247 (502)
T ss_pred             ccccHHHHHHhccchhhhHhhhcchhhhhhcCCCCcccccccceeE---eccCCCCC-----------------------
Confidence            9999999998899999999999999999999999997544322211   11111111                       


Q ss_pred             cccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCCCCCHH
Q 025467          158 GAASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAR  237 (252)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~ta~  237 (252)
                      .+                                                 ......+.+|.||+++||..+|++|.||.
T Consensus       248 TF-------------------------------------------------~KPE~WS~~F~DFi~~CLiK~PE~R~TA~  278 (502)
T KOG0574|consen  248 TF-------------------------------------------------KKPEEWSSEFNDFIRSCLIKKPEERKTAL  278 (502)
T ss_pred             CC-------------------------------------------------CChHhhhhHHHHHHHHHhcCCHHHHHHHH
Confidence            00                                                 11123456899999999999999999999


Q ss_pred             HHHcCCCCCCcc
Q 025467          238 EALRHPFFTRDH  249 (252)
Q Consensus       238 e~l~hpwf~~~~  249 (252)
                      ++++|||++..+
T Consensus       279 ~L~~H~FiknA~  290 (502)
T KOG0574|consen  279 RLCEHTFIKNAP  290 (502)
T ss_pred             HHhhhhhhcCCC
Confidence            999999998764

>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2

Probab=99.93  E-value=9.8e-26  Score=183.83  Aligned_cols=94  Identities=22%  Similarity=0.339  Sum_probs=71.8

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCC-----Ccccc
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ-----NYIVS   75 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~-----~~~~~   75 (252)
                      ||+|||++||+||||||+||++..++                           .++++|||.++......     ....+
T Consensus       136 aL~~lH~~gi~H~dlkp~Nil~~~~~---------------------------~~kl~Dfg~~~~~~~~~~~~~~~~~~~  188 (283)
T cd05091         136 GMEFLSSHHVVHKDLATRNVLVFDKL---------------------------NVKISDLGLFREVYAADYYKLMGNSLL  188 (283)
T ss_pred             HHHHHHHcCccccccchhheEecCCC---------------------------ceEecccccccccccchheeeccCccC
Confidence            68999999999999999999995444                           45666666554322111     11234


Q ss_pred             CCCcccchhhhcCCCCccchhHhHHHHHHHHHh-CCCCCCCCChHHH
Q 025467           76 TRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHENLEH  121 (252)
Q Consensus        76 t~~y~aPE~l~~~~~~~~~Diws~G~~l~~l~~-g~~pf~~~~~~~~  121 (252)
                      ++.|+|||.+.+..++.++||||+||++|++++ |..||.+....+.
T Consensus       189 ~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~  235 (283)
T cd05091         189 PIRWMSPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDV  235 (283)
T ss_pred             CccccCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCHHHH
Confidence            678999999988889999999999999999998 8888876554433

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors

Probab=99.93  E-value=7.9e-26  Score=184.32  Aligned_cols=93  Identities=26%  Similarity=0.376  Sum_probs=72.5

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCC-----Ccccc
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ-----NYIVS   75 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~-----~~~~~   75 (252)
                      ||+|||+.|++|+||||+||+++.++                           .++|+|||.+.......     ....+
T Consensus       136 al~~lH~~~i~H~dlkp~Nil~~~~~---------------------------~~~L~dfg~~~~~~~~~~~~~~~~~~~  188 (283)
T cd05048         136 GMEYLSSHHFVHRDLAARNCLVGEGL---------------------------TVKISDFGLSRDIYSADYYRVQSKSLL  188 (283)
T ss_pred             HHHHHHhCCeeccccccceEEEcCCC---------------------------cEEECCCcceeeccccccccccCCCcc
Confidence            68999999999999999999995444                           45666666654322211     12245


Q ss_pred             CCCcccchhhhcCCCCccchhHhHHHHHHHHHh-CCCCCCCCChHH
Q 025467           76 TRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHENLE  120 (252)
Q Consensus        76 t~~y~aPE~l~~~~~~~~~Diws~G~~l~~l~~-g~~pf~~~~~~~  120 (252)
                      ++.|+|||.+....++.++|+||+||++|++++ |..||.+....+
T Consensus       189 ~~~y~aPE~~~~~~~~~~sDv~slG~il~el~~~g~~p~~~~~~~~  234 (283)
T cd05048         189 PVRWMPPEAILYGKFTTESDIWSFGVVLWEIFSYGLQPYYGFSNQE  234 (283)
T ss_pred             cccccCHHHhccCcCchhhhHHHHHHHHHHHHcCCCCCCCCCCHHH
Confidence            778999999988889999999999999999998 999997655433

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer

>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5

Probab=99.93  E-value=4.3e-26  Score=184.36  Aligned_cols=89  Identities=29%  Similarity=0.481  Sum_probs=68.7

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCC---CCccccCC
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD---QNYIVSTR   77 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~---~~~~~~t~   77 (252)
                      ||+|||+.||+||||+|+||+++.++                           .++++|||.+......   .....++.
T Consensus       118 ~l~~lH~~~i~H~dl~p~nill~~~~---------------------------~~~l~dfg~~~~~~~~~~~~~~~~~~~  170 (267)
T cd06646         118 GLAYLHSKGKMHRDIKGANILLTDNG---------------------------DVKLADFGVAAKITATIAKRKSFIGTP  170 (267)
T ss_pred             HHHHHHHCCccccCCCHHHEEECCCC---------------------------CEEECcCccceeecccccccCccccCc
Confidence            68999999999999999999995443                           4666677666533211   12235788


Q ss_pred             Ccccchhhh---cCCCCccchhHhHHHHHHHHHhCCCCCCCC
Q 025467           78 HYRAPEVIL---GLGWTYPCDIWSVGCILVELCTGEALFQTH  116 (252)
Q Consensus        78 ~y~aPE~l~---~~~~~~~~Diws~G~~l~~l~~g~~pf~~~  116 (252)
                      .|+|||.+.   ...++.++|+||+||++|++++|..||...
T Consensus       171 ~y~~PE~~~~~~~~~~~~~~Dvws~G~il~el~~g~~p~~~~  212 (267)
T cd06646         171 YWMAPEVAAVEKNGGYNQLCDIWAVGITAIELAELQPPMFDL  212 (267)
T ss_pred             cccCHhHcccccCCCCcchhhHHHHHHHHHHHHhCCCCcccc
Confidence            899999985   334778999999999999999999998543

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1

Probab=99.93  E-value=1e-25  Score=182.19  Aligned_cols=147  Identities=29%  Similarity=0.559  Sum_probs=104.7

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCC-------CCcc
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD-------QNYI   73 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~-------~~~~   73 (252)
                      ||+|||++|++|+||+|+||+++.++                          ..++|+|||.+......       ....
T Consensus       115 al~~LH~~~i~H~~i~~~nil~~~~~--------------------------~~~~l~dfg~~~~~~~~~~~~~~~~~~~  168 (268)
T cd06630         115 GLSYLHENQIIHRDVKGANLLIDSTG--------------------------QRLRIADFGAAARLAAKGTGAGEFQGQL  168 (268)
T ss_pred             HHHHHHhCCeecCCCCHHHEEEcCCC--------------------------CEEEEcccccccccccccccCCcccccc
Confidence            68999999999999999999995432                          23566777665433221       1123


Q ss_pred             ccCCCcccchhhhcCCCCccchhHhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHHHHHHhhcCCC
Q 025467           74 VSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRL  153 (252)
Q Consensus        74 ~~t~~y~aPE~l~~~~~~~~~Diws~G~~l~~l~~g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~  153 (252)
                      .++..|+|||.+.+..++.++|+||+||+++++++|..||...........+.....                  .... 
T Consensus       169 ~~~~~~~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~------------------~~~~-  229 (268)
T cd06630         169 LGTIAFMAPEVLRGEQYGRSCDVWSVGCVIIEMATAKPPWNAEKHSNHLALIFKIAS------------------ATTA-  229 (268)
T ss_pred             ccccceeCHhHhccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCcchHHHHHHHhc------------------cCCC-
Confidence            577889999999888889999999999999999999999864332111111111000                  0000 


Q ss_pred             CCCccccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCCC
Q 025467          154 DWPEGAASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDR  233 (252)
Q Consensus       154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R  233 (252)
                                                                            .......+.++.+++.+||+.||++|
T Consensus       230 ------------------------------------------------------~~~~~~~~~~~~~~i~~~l~~~p~~R  255 (268)
T cd06630         230 ------------------------------------------------------PSIPEHLSPGLRDVTLRCLELQPEDR  255 (268)
T ss_pred             ------------------------------------------------------CCCchhhCHHHHHHHHHHcCCCcccC
Confidence                                                                  00012245688999999999999999


Q ss_pred             CCHHHHHcCCCCC
Q 025467          234 LTAREALRHPFFT  246 (252)
Q Consensus       234 ~ta~e~l~hpwf~  246 (252)
                      ||+.++++||||.
T Consensus       256 ~~~~~ll~~~~~~  268 (268)
T cd06630         256 PPSRELLKHPVFR  268 (268)
T ss_pred             cCHHHHhcCcccC
Confidence            9999999999995

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their

>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5

Probab=99.93  E-value=1.1e-25  Score=180.73  Aligned_cols=142  Identities=27%  Similarity=0.464  Sum_probs=104.5

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCC---CccccCC
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ---NYIVSTR   77 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~---~~~~~t~   77 (252)
                      ||+|||+.+++|+||+|+||+++.++                          ..++++|||.+.......   ....|+.
T Consensus       113 ~l~~lh~~~i~H~dl~~~nil~~~~~--------------------------~~~~l~d~~~~~~~~~~~~~~~~~~~~~  166 (257)
T cd08225         113 GLKHIHDRKILHRDIKSQNIFLSKNG--------------------------MVAKLGDFGIARQLNDSMELAYTCVGTP  166 (257)
T ss_pred             HHHHHHHCCcccccCCHHHEEEcCCC--------------------------CeEEecccccchhccCCcccccccCCCc
Confidence            68999999999999999999995432                          234666776665433221   1235788


Q ss_pred             CcccchhhhcCCCCccchhHhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHHHHHHhhcCCCCCCc
Q 025467           78 HYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPE  157 (252)
Q Consensus        78 ~y~aPE~l~~~~~~~~~Diws~G~~l~~l~~g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~  157 (252)
                      .|+|||.+....++.++|+||+||+++++++|..||...+.......+..  +.                     ..   
T Consensus       167 ~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~--~~---------------------~~---  220 (257)
T cd08225         167 YYLSPEICQNRPYNNKTDIWSLGCVLYELCTLKHPFEGNNLHQLVLKICQ--GY---------------------FA---  220 (257)
T ss_pred             cccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCccHHHHHHHHhc--cc---------------------CC---
Confidence            89999999888889999999999999999999999976543222211100  00                     00   


Q ss_pred             cccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCCCCCHH
Q 025467          158 GAASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAR  237 (252)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~ta~  237 (252)
                                                                         ......+.++.+++.+||..+|++|||+.
T Consensus       221 ---------------------------------------------------~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~  249 (257)
T cd08225         221 ---------------------------------------------------PISPNFSRDLRSLISQLFKVSPRDRPSIT  249 (257)
T ss_pred             ---------------------------------------------------CCCCCCCHHHHHHHHHHhccChhhCcCHH
Confidence                                                               00012345889999999999999999999


Q ss_pred             HHHcCCCC
Q 025467          238 EALRHPFF  245 (252)
Q Consensus       238 e~l~hpwf  245 (252)
                      ++++||||
T Consensus       250 ~ll~~~~~  257 (257)
T cd08225         250 SILKRPFL  257 (257)
T ss_pred             HHhhCCCC
Confidence            99999997

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.

>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases

Probab=99.93  E-value=1.7e-25  Score=178.90  Aligned_cols=140  Identities=37%  Similarity=0.635  Sum_probs=106.4

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCC---CCccccCC
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD---QNYIVSTR   77 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~---~~~~~~t~   77 (252)
                      ||.|||+.+++|+||+|.||+++.                           ...++++|||.+......   .....++.
T Consensus       105 ~l~~lh~~~~~H~~l~p~ni~~~~---------------------------~~~~~l~d~~~~~~~~~~~~~~~~~~~~~  157 (250)
T cd05123         105 ALEYLHSLGIIYRDLKPENILLDA---------------------------DGHIKLTDFGLAKELSSEGSRTNTFCGTP  157 (250)
T ss_pred             HHHHHHHCCceecCCCcceEEEcC---------------------------CCcEEEeecCcceecccCCCcccCCcCCc
Confidence            588999999999999999999954                           345677777776543322   22345778


Q ss_pred             CcccchhhhcCCCCccchhHhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHHHHHHhhcCCCCCCc
Q 025467           78 HYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPE  157 (252)
Q Consensus        78 ~y~aPE~l~~~~~~~~~Diws~G~~l~~l~~g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~  157 (252)
                      .|++||.+.+...+.++|+||+|+++|++++|..||...+.......+..                       ..+..+ 
T Consensus       158 ~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~-----------------------~~~~~~-  213 (250)
T cd05123         158 EYLAPEVLLGKGYGKAVDWWSLGVLLYEMLTGKPPFYAEDRKEIYEKILK-----------------------DPLRFP-  213 (250)
T ss_pred             cccChHHhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHhc-----------------------CCCCCC-
Confidence            89999999887788999999999999999999999976554222222111                       011111 


Q ss_pred             cccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCCCCCH-
Q 025467          158 GAASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTA-  236 (252)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~ta-  236 (252)
                                                                            ...+..+.+++++||..||++|||+ 
T Consensus       214 ------------------------------------------------------~~~~~~l~~~i~~~l~~~p~~R~~~~  239 (250)
T cd05123         214 ------------------------------------------------------EFLSPEARDLISGLLQKDPTKRLGSG  239 (250)
T ss_pred             ------------------------------------------------------CCCCHHHHHHHHHHhcCCHhhCCCcc
Confidence                                                                  1224688999999999999999999 


Q ss_pred             --HHHHcCCCC
Q 025467          237 --REALRHPFF  245 (252)
Q Consensus       237 --~e~l~hpwf  245 (252)
                        +++++||||
T Consensus       240 ~~~~l~~~~~f  250 (250)
T cd05123         240 GAEEIKAHPFF  250 (250)
T ss_pred             cHHHHHhCCCC
Confidence              999999998

Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the

>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1

Probab=99.93  E-value=1.6e-25  Score=181.90  Aligned_cols=163  Identities=28%  Similarity=0.427  Sum_probs=111.2

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCCCccccCCCcc
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYR   80 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~~~~~~t~~y~   80 (252)
                      ||+|||+.|++|+||+|+||++..++..++.|||++...............    ...++..............++..|+
T Consensus       114 ~l~~Lh~~~~~H~dl~~~ni~i~~~~~~~l~df~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~  189 (280)
T cd05581         114 ALEYLHSKGIIHRDLKPENILLDKDMHIKITDFGTAKVLDPNSSPESNKGD----ATNIDSQIEKNRRRFASFVGTAEYV  189 (280)
T ss_pred             HHHHHHHCCeeecCCCHHHeEECCCCCEEecCCccccccCCccccccCCCC----CccccccccccccccccccCCcccc
Confidence            689999999999999999999988777777787766543222111000000    0001111111111112235678899


Q ss_pred             cchhhhcCCCCccchhHhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHHHHHHhhcCCCCCCcccc
Q 025467           81 APEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAA  160 (252)
Q Consensus        81 aPE~l~~~~~~~~~Diws~G~~l~~l~~g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (252)
                      |||......++.++|+||+||+++++++|..||...+.......+....                       ...+    
T Consensus       190 ~Pe~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~-----------------------~~~~----  242 (280)
T cd05581         190 SPELLNEKPAGKSSDLWALGCIIYQMLTGKPPFRGSNEYLTFQKILKLE-----------------------YSFP----  242 (280)
T ss_pred             CHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHhcC-----------------------CCCC----
Confidence            9999988888899999999999999999999998765433332221110                       0000    


Q ss_pred             chhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCCCCCH----
Q 025467          161 SRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTA----  236 (252)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~ta----  236 (252)
                                                                         ...++.+.+|+.+||+.||.+|||+    
T Consensus       243 ---------------------------------------------------~~~~~~~~~li~~~l~~~p~~R~~~~~~~  271 (280)
T cd05581         243 ---------------------------------------------------PNFPPDAKDLIEKLLVLDPQDRLGVNEGY  271 (280)
T ss_pred             ---------------------------------------------------CccCHHHHHHHHHHhcCCHhhCCCcccCH
Confidence                                                               1234688999999999999999999    


Q ss_pred             HHHHcCCCC
Q 025467          237 REALRHPFF  245 (252)
Q Consensus       237 ~e~l~hpwf  245 (252)
                      +++++||||
T Consensus       272 ~~ll~~~~~  280 (280)
T cd05581         272 DELKAHPFF  280 (280)
T ss_pred             HHHhcCCCC
Confidence            999999998

Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto

>KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only]

Probab=99.93  E-value=3.9e-26  Score=185.14  Aligned_cols=140  Identities=26%  Similarity=0.440  Sum_probs=114.6

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCC--CCccccCCC
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD--QNYIVSTRH   78 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~--~~~~~~t~~   78 (252)
                      |+.|||.+++||||||.+|||+                           +.+..+||+|||++......  .+..+|++.
T Consensus       165 AVhYCHknrVvHRDLKLENILL---------------------------D~N~NiKIADFGLSNly~~~kfLqTFCGSPL  217 (668)
T KOG0611|consen  165 AVHYCHKNRVVHRDLKLENILL---------------------------DQNNNIKIADFGLSNLYADKKFLQTFCGSPL  217 (668)
T ss_pred             HHHHHhhccceecccchhheee---------------------------cCCCCeeeeccchhhhhccccHHHHhcCCcc
Confidence            6789999999999999999999                           66677899999988654433  244699999


Q ss_pred             cccchhhhcCCC-CccchhHhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHHHHHHhhcCCCCCCc
Q 025467           79 YRAPEVILGLGW-TYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPE  157 (252)
Q Consensus        79 y~aPE~l~~~~~-~~~~Diws~G~~l~~l~~g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~  157 (252)
                      |.+||.+.+.+| ++..|.||+||++|.+..|..||.|.+....+.+|..                       |.+.-| 
T Consensus       218 YASPEIvNG~PY~GPEVDsWsLGvLLYtLVyGtMPFDG~Dhk~lvrQIs~-----------------------GaYrEP-  273 (668)
T KOG0611|consen  218 YASPEIVNGTPYKGPEVDSWSLGVLLYTLVYGTMPFDGRDHKRLVRQISR-----------------------GAYREP-  273 (668)
T ss_pred             cCCccccCCCCCCCCccchhhHHHHHHHHhhcccccCCchHHHHHHHhhc-----------------------ccccCC-
Confidence            999999999998 5889999999999999999999999887655544322                       222111 


Q ss_pred             cccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCCCCCHH
Q 025467          158 GAASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAR  237 (252)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~ta~  237 (252)
                                                                             ..+.++.-||+.||.+||++|.|.+
T Consensus       274 -------------------------------------------------------~~PSdA~gLIRwmLmVNP~RRATie  298 (668)
T KOG0611|consen  274 -------------------------------------------------------ETPSDASGLIRWMLMVNPERRATIE  298 (668)
T ss_pred             -------------------------------------------------------CCCchHHHHHHHHHhcCcccchhHH
Confidence                                                                   2234778899999999999999999


Q ss_pred             HHHcCCCCC
Q 025467          238 EALRHPFFT  246 (252)
Q Consensus       238 e~l~hpwf~  246 (252)
                      ++..|=|++
T Consensus       299 DiAsHWWvN  307 (668)
T KOG0611|consen  299 DIASHWWVN  307 (668)
T ss_pred             HHhhhheee
Confidence            999998875

>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor

Probab=99.93  E-value=1.1e-25  Score=190.51  Aligned_cols=90  Identities=28%  Similarity=0.408  Sum_probs=70.1

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCCC-----cccc
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQN-----YIVS   75 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~~-----~~~~   75 (252)
                      ||+|||++||+||||||+|||++.++                           .++|+|||++........     ...+
T Consensus       224 aL~yLH~~giiHrDLkp~Nil~~~~~---------------------------~~kL~DfGla~~~~~~~~~~~~~~~~~  276 (374)
T cd05106         224 GMDFLASKNCIHRDVAARNVLLTDGR---------------------------VAKICDFGLARDIMNDSNYVVKGNARL  276 (374)
T ss_pred             HHHHHHHCCEEeccCchheEEEeCCC---------------------------eEEEeeceeeeeccCCcceeeccCCCC
Confidence            68999999999999999999995443                           456666666543222111     1134


Q ss_pred             CCCcccchhhhcCCCCccchhHhHHHHHHHHHh-CCCCCCCCC
Q 025467           76 TRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHE  117 (252)
Q Consensus        76 t~~y~aPE~l~~~~~~~~~Diws~G~~l~~l~~-g~~pf~~~~  117 (252)
                      +..|+|||++....++.++||||+||++|++++ |..||....
T Consensus       277 ~~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt~G~~Pf~~~~  319 (374)
T cd05106         277 PVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGKSPYPGIL  319 (374)
T ss_pred             ccceeCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCcccc
Confidence            567999999988889999999999999999997 999997543

Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti

>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1

Probab=99.93  E-value=3e-25  Score=184.01  Aligned_cols=146  Identities=29%  Similarity=0.440  Sum_probs=107.4

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCCCccccCCCcc
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYR   80 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~~~~~~t~~y~   80 (252)
                      ||.|||++||+||||+|+||++..                           ...++++|||.+...... ....++..|+
T Consensus       137 ~l~~lH~~~i~H~dL~p~Nil~~~---------------------------~~~~kl~dfg~~~~~~~~-~~~~~~~~y~  188 (317)
T cd06635         137 GLAYLHSHNMIHRDIKAGNILLTE---------------------------PGQVKLADFGSASIASPA-NSFVGTPYWM  188 (317)
T ss_pred             HHHHHHHCCcccCCCCcccEEECC---------------------------CCCEEEecCCCccccCCc-ccccCCcccc
Confidence            589999999999999999999944                           445777777776543322 2236788899


Q ss_pred             cchhhh---cCCCCccchhHhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHHHHHHhhcCCCCCCc
Q 025467           81 APEVIL---GLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPE  157 (252)
Q Consensus        81 aPE~l~---~~~~~~~~Diws~G~~l~~l~~g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~  157 (252)
                      |||.+.   ...++.++|+||+||++|++++|..||...........+.....                      ...  
T Consensus       189 aPE~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~~~----------------------~~~--  244 (317)
T cd06635         189 APEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNES----------------------PTL--  244 (317)
T ss_pred             ChhhhhcCCCCCCCccccHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHhccC----------------------CCC--
Confidence            999985   34578899999999999999999999876543333222211000                      000  


Q ss_pred             cccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCCCCCHH
Q 025467          158 GAASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAR  237 (252)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~ta~  237 (252)
                                                                          .....+..+.+|+.+||+.+|.+|||+.
T Consensus       245 ----------------------------------------------------~~~~~~~~l~~li~~~l~~~p~~Rpt~~  272 (317)
T cd06635         245 ----------------------------------------------------QSNEWSDYFRNFVDSCLQKIPQDRPTSE  272 (317)
T ss_pred             ----------------------------------------------------CCccccHHHHHHHHHHccCCcccCcCHH
Confidence                                                                0012345789999999999999999999


Q ss_pred             HHHcCCCCCCccc
Q 025467          238 EALRHPFFTRDHL  250 (252)
Q Consensus       238 e~l~hpwf~~~~~  250 (252)
                      ++++|||+.....
T Consensus       273 ~il~~~~~~~~~~  285 (317)
T cd06635         273 ELLKHMFVLRERP  285 (317)
T ss_pred             HHHhChhhhccCc
Confidence            9999999977654

Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron

>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1

Probab=99.93  E-value=9.9e-26  Score=181.35  Aligned_cols=143  Identities=26%  Similarity=0.454  Sum_probs=105.4

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCC--CCccccCCC
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD--QNYIVSTRH   78 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~--~~~~~~t~~   78 (252)
                      ||.|||++|++|+||+|+||+++.+                           ..++++|||.+......  .....++..
T Consensus       112 ~l~~lh~~~i~h~dl~~~nil~~~~---------------------------~~~~l~d~~~~~~~~~~~~~~~~~~~~~  164 (258)
T cd05578         112 ALEYLHSKGIIHRDIKPDNILLDEQ---------------------------GHVHITDFNIATKVTPDTLTTSTSGTPG  164 (258)
T ss_pred             HHHHHHhCCeeccCCCHHHeEEcCC---------------------------CCEEEeecccccccCCCccccccCCChh
Confidence            5899999999999999999999543                           45677777766543332  122357778


Q ss_pred             cccchhhhcCCCCccchhHhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHHHHHHhhcCCCCCCcc
Q 025467           79 YRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEG  158 (252)
Q Consensus        79 y~aPE~l~~~~~~~~~Diws~G~~l~~l~~g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~  158 (252)
                      |+|||.+....++.++|+||+|+++|++++|..||........ ..+.....                   ....     
T Consensus       165 y~~PE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~-~~~~~~~~-------------------~~~~-----  219 (258)
T cd05578         165 YMAPEVLCRQGYSVAVDWWSLGVTAYECLRGKRPYRGHSRTIR-DQIRAKQE-------------------TADV-----  219 (258)
T ss_pred             hcCHHHHcccCCCCcccchhhHHHHHHHHhCCCCCCCCCccHH-HHHHHHhc-------------------cccc-----
Confidence            9999999888889999999999999999999999976553110 00000000                   0000     


Q ss_pred             ccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCCCCCH--
Q 025467          159 AASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTA--  236 (252)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~ta--  236 (252)
                                                                        ......+..+.++|.+||..||.+|+|+  
T Consensus       220 --------------------------------------------------~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~  249 (258)
T cd05578         220 --------------------------------------------------LYPATWSTEAIDAINKLLERDPQKRLGDNL  249 (258)
T ss_pred             --------------------------------------------------cCcccCcHHHHHHHHHHccCChhHcCCccH
Confidence                                                              0012234688999999999999999999  


Q ss_pred             HHHHcCCCC
Q 025467          237 REALRHPFF  245 (252)
Q Consensus       237 ~e~l~hpwf  245 (252)
                      +|+++||||
T Consensus       250 ~~l~~~~~~  258 (258)
T cd05578         250 KDLKNHPYF  258 (258)
T ss_pred             HHHhcCCCC
Confidence            999999998

Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.

>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4

Probab=99.93  E-value=2.7e-25  Score=179.22  Aligned_cols=144  Identities=32%  Similarity=0.532  Sum_probs=102.3

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCC-------Ccc
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ-------NYI   73 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~-------~~~   73 (252)
                      ||+|||+.||+|+||+|+||+++.++                           .++|+|||.+.......       ...
T Consensus       111 ~l~~lh~~~i~H~dl~~~nil~~~~~---------------------------~~kl~d~g~~~~~~~~~~~~~~~~~~~  163 (264)
T cd06626         111 GLAYLHSHGIVHRDIKPANIFLDHNG---------------------------VIKLGDFGCAVKLKNNTTTMGEEVQSL  163 (264)
T ss_pred             HHHHHHHCCcccCCCCHHHEEECCCC---------------------------CEEEcccccccccCCCCCcccccccCC
Confidence            58999999999999999999996544                           45566666554322211       123


Q ss_pred             ccCCCcccchhhhcCC---CCccchhHhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHHHHHHhhc
Q 025467           74 VSTRHYRAPEVILGLG---WTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRR  150 (252)
Q Consensus        74 ~~t~~y~aPE~l~~~~---~~~~~Diws~G~~l~~l~~g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~  150 (252)
                      .++..|+|||++.+..   ++.++|+||+||+++++++|..||............... +..+                 
T Consensus       164 ~~~~~~~~PE~~~~~~~~~~~~~~Dv~s~G~il~~l~~g~~pf~~~~~~~~~~~~~~~-~~~~-----------------  225 (264)
T cd06626         164 AGTPAYMAPEVITGGKGKGHGRAADIWSLGCVVLEMATGKRPWSELDNEFQIMFHVGA-GHKP-----------------  225 (264)
T ss_pred             cCCcCccChhhccCCCCCCCCcccchHHHHHHHHHHHhCCCCccCCcchHHHHHHHhc-CCCC-----------------
Confidence            5677899999998765   788999999999999999999999754322211111000 1000                 


Q ss_pred             CCCCCCccccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCC
Q 025467          151 GRLDWPEGAASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDP  230 (252)
Q Consensus       151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP  230 (252)
                         ..+.                                                     ....+..+.+++.+||+.+|
T Consensus       226 ---~~~~-----------------------------------------------------~~~~~~~~~~li~~~l~~~p  249 (264)
T cd06626         226 ---PIPD-----------------------------------------------------SLQLSPEGKDFLDRCLESDP  249 (264)
T ss_pred             ---CCCc-----------------------------------------------------ccccCHHHHHHHHHHccCCc
Confidence               0000                                                     01234578899999999999


Q ss_pred             CCCCCHHHHHcCCCC
Q 025467          231 TDRLTAREALRHPFF  245 (252)
Q Consensus       231 ~~R~ta~e~l~hpwf  245 (252)
                      .+|||+.+++.|||+
T Consensus       250 ~~R~~~~~i~~~~~~  264 (264)
T cd06626         250 KKRPTASELLQHPFV  264 (264)
T ss_pred             ccCCCHHHHhcCCCC
Confidence            999999999999996

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4

>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1

Probab=99.93  E-value=2.1e-25  Score=183.83  Aligned_cols=94  Identities=24%  Similarity=0.320  Sum_probs=70.8

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCC-----Ccccc
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ-----NYIVS   75 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~-----~~~~~   75 (252)
                      ||+|||++||+||||||+|||++.++                           .++|+|||.+.......     ....+
T Consensus       150 al~~lH~~~ivH~dlkp~Nill~~~~---------------------------~~kl~DfG~~~~~~~~~~~~~~~~~~~  202 (304)
T cd05096         150 GMKYLSSLNFVHRDLATRNCLVGENL---------------------------TIKIADFGMSRNLYAGDYYRIQGRAVL  202 (304)
T ss_pred             HHHHHHHCCccccCcchhheEEcCCc---------------------------cEEECCCccceecccCceeEecCcCCC
Confidence            68999999999999999999995544                           45666666554322211     11244


Q ss_pred             CCCcccchhhhcCCCCccchhHhHHHHHHHHHh--CCCCCCCCChHHH
Q 025467           76 TRHYRAPEVILGLGWTYPCDIWSVGCILVELCT--GEALFQTHENLEH  121 (252)
Q Consensus        76 t~~y~aPE~l~~~~~~~~~Diws~G~~l~~l~~--g~~pf~~~~~~~~  121 (252)
                      +..|+|||++....++.++||||+||++|++++  +..||...+..+.
T Consensus       203 ~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~~~p~~~~~~~~~  250 (304)
T cd05096         203 PIRWMAWECILMGKFTTASDVWAFGVTLWEILMLCKEQPYGELTDEQV  250 (304)
T ss_pred             CccccCHHHHhcCCCCchhhhHHHHHHHHHHHHccCCCCCCcCCHHHH
Confidence            678999999988889999999999999999987  5577776554433

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k

>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7

Probab=99.93  E-value=1e-25  Score=184.99  Aligned_cols=149  Identities=28%  Similarity=0.431  Sum_probs=103.9

Q ss_pred             Chhhhhc-cCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCC--CccccCC
Q 025467            1 MFAVMHD-LCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ--NYIVSTR   77 (252)
Q Consensus         1 aL~~lH~-~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~--~~~~~t~   77 (252)
                      ||+|||+ .||+||||+|+||+++.+                           ..++|+|||.+.......  ....++.
T Consensus       126 ~l~~lH~~~~i~H~dl~p~nill~~~---------------------------~~~kL~dfg~~~~~~~~~~~~~~~~~~  178 (296)
T cd06618         126 ALHYLKEKHGVIHRDVKPSNILLDAS---------------------------GNVKLCDFGISGRLVDSKAKTRSAGCA  178 (296)
T ss_pred             HHHHHHhhCCEecCCCcHHHEEEcCC---------------------------CCEEECccccchhccCCCcccCCCCCc
Confidence            5899997 699999999999999543                           456677777664332211  1224677


Q ss_pred             CcccchhhhcCC----CCccchhHhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHHHHHHhhcCCC
Q 025467           78 HYRAPEVILGLG----WTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRL  153 (252)
Q Consensus        78 ~y~aPE~l~~~~----~~~~~Diws~G~~l~~l~~g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~  153 (252)
                      .|+|||.+.+..    ++.++|+||+||++|++++|+.||......  ...+......                   ...
T Consensus       179 ~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~--~~~~~~~~~~-------------------~~~  237 (296)
T cd06618         179 AYMAPERIDPPDPNPKYDIRADVWSLGISLVELATGQFPYKNCKTE--FEVLTKILQE-------------------EPP  237 (296)
T ss_pred             cccCHhhcCCCCCccccccchhHHHHHHHHHHHHhCCCCCCcchhH--HHHHHHHhcC-------------------CCC
Confidence            899999987543    778999999999999999999999653221  1111111100                   000


Q ss_pred             CCCccccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCCC
Q 025467          154 DWPEGAASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDR  233 (252)
Q Consensus       154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R  233 (252)
                      ..+.                                                     ....+.++.+|+.+||..||.+|
T Consensus       238 ~~~~-----------------------------------------------------~~~~~~~l~~li~~~l~~~p~~R  264 (296)
T cd06618         238 SLPP-----------------------------------------------------NEGFSPDFCSFVDLCLTKDHRKR  264 (296)
T ss_pred             CCCC-----------------------------------------------------CCCCCHHHHHHHHHHccCChhhC
Confidence            0000                                                     01234578999999999999999


Q ss_pred             CCHHHHHcCCCCCCccc
Q 025467          234 LTAREALRHPFFTRDHL  250 (252)
Q Consensus       234 ~ta~e~l~hpwf~~~~~  250 (252)
                      ||+.++++||||.....
T Consensus       265 p~~~~il~~~~~~~~~~  281 (296)
T cd06618         265 PKYRELLQHPFIRRYET  281 (296)
T ss_pred             CCHHHHhcChhhhccch
Confidence            99999999999987543

Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it

>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase

Probab=99.93  E-value=1.7e-25  Score=179.41  Aligned_cols=141  Identities=30%  Similarity=0.532  Sum_probs=104.6

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCC---CccccCC
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ---NYIVSTR   77 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~---~~~~~t~   77 (252)
                      ||.|||++|++|+||+|+||+++.++                           .++++|||.+.......   ....+++
T Consensus       115 ~l~~lh~~~~~H~dl~~~nil~~~~~---------------------------~~~l~d~~~~~~~~~~~~~~~~~~~~~  167 (258)
T cd08215         115 ALKYLHSRKILHRDIKPQNIFLTSNG---------------------------LVKLGDFGISKVLSSTVDLAKTVVGTP  167 (258)
T ss_pred             HHHHHHhCCEecccCChHHeEEcCCC---------------------------cEEECCccceeecccCcceecceeeee
Confidence            58899999999999999999995544                           45666666554332221   1235778


Q ss_pred             CcccchhhhcCCCCccchhHhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHHHHHHhhcCCCCCCc
Q 025467           78 HYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPE  157 (252)
Q Consensus        78 ~y~aPE~l~~~~~~~~~Diws~G~~l~~l~~g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~  157 (252)
                      .|+|||.+....++.++|+||+|++++++++|..||...+..........                      ......  
T Consensus       168 ~y~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~----------------------~~~~~~--  223 (258)
T cd08215         168 YYLSPELCQNKPYNYKSDIWSLGCVLYELCTLKHPFEGENLLELALKILK----------------------GQYPPI--  223 (258)
T ss_pred             cccChhHhccCCCCccccHHHHHHHHHHHHcCCCCCCCCcHHHHHHHHhc----------------------CCCCCC--
Confidence            89999999888889999999999999999999999976543222221110                      000000  


Q ss_pred             cccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCCCCCHH
Q 025467          158 GAASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAR  237 (252)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~ta~  237 (252)
                                                                           ....+..+.+++.+||..+|++|||+.
T Consensus       224 -----------------------------------------------------~~~~~~~~~~~i~~~l~~~p~~Rp~~~  250 (258)
T cd08215         224 -----------------------------------------------------PSQYSSELRNLVSSLLQKDPEERPSIA  250 (258)
T ss_pred             -----------------------------------------------------CCCCCHHHHHHHHHHcCCChhhCcCHH
Confidence                                                                 012346889999999999999999999


Q ss_pred             HHHcCCCC
Q 025467          238 EALRHPFF  245 (252)
Q Consensus       238 e~l~hpwf  245 (252)
                      ++|+||||
T Consensus       251 ~ll~~~~~  258 (258)
T cd08215         251 QILQSPFI  258 (258)
T ss_pred             HHhcCCCC
Confidence            99999998

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They

>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase

Probab=99.92  E-value=2e-25  Score=179.39  Aligned_cols=90  Identities=26%  Similarity=0.408  Sum_probs=71.7

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCCCccccCCCcc
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYR   80 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~~~~~~t~~y~   80 (252)
                      ||+|||++||+||||||+||+++.+                           +.++++|||.+...........++..|+
T Consensus       114 ~l~~lH~~~i~H~dlkp~nil~~~~---------------------------~~~kl~dfg~~~~~~~~~~~~~~~~~y~  166 (256)
T cd05082         114 AMEYLEANNFVHRDLAARNVLVSED---------------------------NVAKVSDFGLTKEASSTQDTGKLPVKWT  166 (256)
T ss_pred             HHHHHHhCCEeccccchheEEEcCC---------------------------CcEEecCCccceeccccCCCCccceeec
Confidence            5899999999999999999999544                           4567777776654333333334456799


Q ss_pred             cchhhhcCCCCccchhHhHHHHHHHHHh-CCCCCCCCC
Q 025467           81 APEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHE  117 (252)
Q Consensus        81 aPE~l~~~~~~~~~Diws~G~~l~~l~~-g~~pf~~~~  117 (252)
                      |||++.+..++.++||||+||++|++++ |..||...+
T Consensus       167 aPE~~~~~~~~~~~Dv~slG~i~~~l~~~g~~p~~~~~  204 (256)
T cd05082         167 APEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIP  204 (256)
T ss_pred             CHHHHccCCCCchhhhHHHHHHHHHHHhCCCCCCCCCC
Confidence            9999988888999999999999999997 999987544

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re

>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl

Probab=99.92  E-value=1.9e-25  Score=180.99  Aligned_cols=91  Identities=24%  Similarity=0.348  Sum_probs=70.8

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCC-----Ccccc
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ-----NYIVS   75 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~-----~~~~~   75 (252)
                      ||+|||++||+||||||+|||++.++                           .++++|||.+.......     ....+
T Consensus       124 ~l~~lH~~~i~H~dlkp~Nil~~~~~---------------------------~~kl~Dfg~~~~~~~~~~~~~~~~~~~  176 (272)
T cd05075         124 GMEYLSSKSFIHRDLAARNCMLNENM---------------------------NVCVADFGLSKKIYNGDYYRQGRIAKM  176 (272)
T ss_pred             HHHHHHHCCeeccccchhheEEcCCC---------------------------CEEECCCCcccccCcccceecCCcccC
Confidence            68999999999999999999995444                           45666666655432211     11235


Q ss_pred             CCCcccchhhhcCCCCccchhHhHHHHHHHHHh-CCCCCCCCCh
Q 025467           76 TRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHEN  118 (252)
Q Consensus        76 t~~y~aPE~l~~~~~~~~~Diws~G~~l~~l~~-g~~pf~~~~~  118 (252)
                      +..|++||.+.+..++.++|+||+||++|++++ |..||.+...
T Consensus       177 ~~~~~~pe~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~  220 (272)
T cd05075         177 PVKWIAIESLADRVYTTKSDVWSFGVTMWEIATRGQTPYPGVEN  220 (272)
T ss_pred             CcccCCHHHccCCCcChHHHHHHHHHHHHHHHcCCCCCCCCCCH
Confidence            667999999988889999999999999999999 7899976544

Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor

>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor

Probab=99.92  E-value=3.4e-25  Score=181.26  Aligned_cols=145  Identities=26%  Similarity=0.373  Sum_probs=104.3

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCC-----Ccccc
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ-----NYIVS   75 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~-----~~~~~   75 (252)
                      ||.|||++||+||||||+||+++.++                           .++++|||.++......     ....+
T Consensus       131 ~l~~lH~~~i~H~dikp~nili~~~~---------------------------~~~L~Dfg~~~~~~~~~~~~~~~~~~~  183 (288)
T cd05061         131 GMAYLNAKKFVHRDLAARNCMVAHDF---------------------------TVKIGDFGMTRDIYETDYYRKGGKGLL  183 (288)
T ss_pred             HHHHHHhCCCcCCCCChheEEEcCCC---------------------------cEEECcCCccccccccccccccCCCcc
Confidence            68999999999999999999995544                           45666666554321111     11234


Q ss_pred             CCCcccchhhhcCCCCccchhHhHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHHHHHHhhcCCCC
Q 025467           76 TRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLD  154 (252)
Q Consensus        76 t~~y~aPE~l~~~~~~~~~Diws~G~~l~~l~~-g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~  154 (252)
                      +..|+|||.+.+..++.++|+||+||++|++++ |..||.+....+....+..  +                    +...
T Consensus       184 ~~~y~~pE~~~~~~~~~~~DvwslG~~l~el~~~~~~p~~~~~~~~~~~~~~~--~--------------------~~~~  241 (288)
T cd05061         184 PVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMD--G--------------------GYLD  241 (288)
T ss_pred             cccccCHHHhccCCCChHhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHc--C--------------------CCCC
Confidence            567999999988888999999999999999998 7888876543332221100  0                    0000


Q ss_pred             CCccccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCCCC
Q 025467          155 WPEGAASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRL  234 (252)
Q Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~  234 (252)
                      .                                                       ....+..+.+++.+||+.||++||
T Consensus       242 ~-------------------------------------------------------~~~~~~~~~~li~~~l~~~p~~Rp  266 (288)
T cd05061         242 Q-------------------------------------------------------PDNCPERVTDLMRMCWQFNPKMRP  266 (288)
T ss_pred             C-------------------------------------------------------CCCCCHHHHHHHHHHcCCChhHCc
Confidence            0                                                       012345899999999999999999


Q ss_pred             CHHHHHc------CCCCCCcc
Q 025467          235 TAREALR------HPFFTRDH  249 (252)
Q Consensus       235 ta~e~l~------hpwf~~~~  249 (252)
                      |+.++++      ||||....
T Consensus       267 s~~~ll~~l~~~~~~~~~~~~  287 (288)
T cd05061         267 TFLEIVNLLKDDLHPSFPEVS  287 (288)
T ss_pred             CHHHHHHHHHhhcCCCCCCCC
Confidence            9999988      99998753

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta

>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases

Probab=99.92  E-value=1.2e-25  Score=182.68  Aligned_cols=146  Identities=26%  Similarity=0.487  Sum_probs=105.0

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCC---CccccCC
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ---NYIVSTR   77 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~---~~~~~t~   77 (252)
                      ||+|||+.||+|+||+|+||+++.+                           +.++++|||.+.......   ....|+.
T Consensus       113 ~l~~lh~~~i~H~dl~p~ni~i~~~---------------------------~~~~l~dfg~~~~~~~~~~~~~~~~~~~  165 (277)
T cd06917         113 ALKYIHKVGVIHRDIKAANILVTNT---------------------------GNVKLCDFGVAALLNQNSSKRSTFVGTP  165 (277)
T ss_pred             HHHHHHhCCcccCCcCHHHEEEcCC---------------------------CCEEEccCCceeecCCCccccccccCCc
Confidence            5899999999999999999999544                           456667777665432221   2235788


Q ss_pred             CcccchhhhcC-CCCccchhHhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHHHHHHhhcCCCCCC
Q 025467           78 HYRAPEVILGL-GWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWP  156 (252)
Q Consensus        78 ~y~aPE~l~~~-~~~~~~Diws~G~~l~~l~~g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~  156 (252)
                      .|+|||.+... .++.++|+||+||++|++++|..||.+.+.......+   .                    ..   .+
T Consensus       166 ~y~aPE~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~~~~~~---~--------------------~~---~~  219 (277)
T cd06917         166 YWMAPEVITEGKYYDTKADIWSLGITIYEMATGNPPYSDVDAFRAMMLI---P--------------------KS---KP  219 (277)
T ss_pred             ceeCHHHhccCCccccchhHHHHHHHHHHHHhCCCCCCCCChhhhhhcc---c--------------------cC---CC
Confidence            89999998654 4688999999999999999999999754322111100   0                    00   00


Q ss_pred             ccccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCCCCCH
Q 025467          157 EGAASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTA  236 (252)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~ta  236 (252)
                                     +..                                   .....+.++.+++.+||+.||++|||+
T Consensus       220 ---------------~~~-----------------------------------~~~~~~~~~~~~i~~~l~~~p~~R~~~  249 (277)
T cd06917         220 ---------------PRL-----------------------------------EDNGYSKLLREFVAACLDEEPKERLSA  249 (277)
T ss_pred             ---------------CCC-----------------------------------CcccCCHHHHHHHHHHcCCCcccCcCH
Confidence                           000                                   001134588999999999999999999


Q ss_pred             HHHHcCCCCCCcc
Q 025467          237 REALRHPFFTRDH  249 (252)
Q Consensus       237 ~e~l~hpwf~~~~  249 (252)
                      .+++.||||+...
T Consensus       250 ~~il~~~~~~~~~  262 (277)
T cd06917         250 EELLKSKWIKAHS  262 (277)
T ss_pred             HHHhhChHhhccc
Confidence            9999999997754

Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent

>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases

Probab=99.92  E-value=2.6e-25  Score=180.98  Aligned_cols=93  Identities=25%  Similarity=0.353  Sum_probs=71.6

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCC-----CCcccc
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD-----QNYIVS   75 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~-----~~~~~~   75 (252)
                      ||+|||++|++||||||+||+++.++                           .++|+|||.+......     .....+
T Consensus       134 ~l~~lH~~~i~h~dlkp~nili~~~~---------------------------~~kl~d~g~~~~~~~~~~~~~~~~~~~  186 (280)
T cd05049         134 GMVYLASQHFVHRDLATRNCLVGYDL---------------------------VVKIGDFGMSRDVYTTDYYRVGGHTML  186 (280)
T ss_pred             HHHHHhhCCeeccccccceEEEcCCC---------------------------eEEECCcccceecccCcceecCCCCcc
Confidence            58899999999999999999995544                           4555666655432111     112234


Q ss_pred             CCCcccchhhhcCCCCccchhHhHHHHHHHHHh-CCCCCCCCChHH
Q 025467           76 TRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHENLE  120 (252)
Q Consensus        76 t~~y~aPE~l~~~~~~~~~Diws~G~~l~~l~~-g~~pf~~~~~~~  120 (252)
                      +..|+|||++.+..++.++||||+||++|++++ |..||...+...
T Consensus       187 ~~~y~aPE~~~~~~~~~~~Di~slG~il~e~~~~g~~p~~~~~~~~  232 (280)
T cd05049         187 PIRWMPPESIMYRKFTTESDVWSFGVVLWEIFTYGKQPWYGLSNEE  232 (280)
T ss_pred             cceecChhhhccCCcchhhhHHHHHHHHHHHHhcCCCCCCCCCHHH
Confidence            678999999998889999999999999999998 999997655433

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt

>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1

Probab=99.92  E-value=2.6e-25  Score=182.74  Aligned_cols=92  Identities=25%  Similarity=0.283  Sum_probs=70.0

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCC--CccccCCC
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ--NYIVSTRH   78 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~--~~~~~t~~   78 (252)
                      ||+|||++||+||||||+|||++.++                           .++|+|||++.......  .....+..
T Consensus       131 al~~lH~~~ivH~dlkp~Nill~~~~---------------------------~~kl~dfg~~~~~~~~~~~~~~~~~~~  183 (297)
T cd05089         131 GMQYLSEKQFIHRDLAARNVLVGENL---------------------------ASKIADFGLSRGEEVYVKKTMGRLPVR  183 (297)
T ss_pred             HHHHHHHCCcccCcCCcceEEECCCC---------------------------eEEECCcCCCccccceeccCCCCcCcc
Confidence            68999999999999999999995544                           45666666654321111  11122456


Q ss_pred             cccchhhhcCCCCccchhHhHHHHHHHHHh-CCCCCCCCChH
Q 025467           79 YRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHENL  119 (252)
Q Consensus        79 y~aPE~l~~~~~~~~~Diws~G~~l~~l~~-g~~pf~~~~~~  119 (252)
                      |+|||++.+..++.++|||||||++|+|++ |..||.+....
T Consensus       184 y~aPE~~~~~~~~~~~DvwSlG~il~el~t~g~~pf~~~~~~  225 (297)
T cd05089         184 WMAIESLNYSVYTTKSDVWSFGVLLWEIVSLGGTPYCGMTCA  225 (297)
T ss_pred             ccCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCHH
Confidence            999999988889999999999999999997 99999765543

Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.

>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B

Probab=99.92  E-value=2.4e-25  Score=182.14  Aligned_cols=93  Identities=25%  Similarity=0.374  Sum_probs=71.8

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCC-----Ccccc
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ-----NYIVS   75 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~-----~~~~~   75 (252)
                      ||+|||++|++||||||+||+++.++                           .++++|||.+.......     ....+
T Consensus       132 aL~~lH~~~i~H~dlkp~Nili~~~~---------------------------~~kl~dfg~~~~~~~~~~~~~~~~~~~  184 (288)
T cd05093         132 GMVYLASQHFVHRDLATRNCLVGENL---------------------------LVKIGDFGMSRDVYSTDYYRVGGHTML  184 (288)
T ss_pred             HHHHHHhCCeeecccCcceEEEccCC---------------------------cEEeccCCccccccCCceeecCCCCCc
Confidence            68999999999999999999995544                           45666666654322111     11234


Q ss_pred             CCCcccchhhhcCCCCccchhHhHHHHHHHHHh-CCCCCCCCChHH
Q 025467           76 TRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHENLE  120 (252)
Q Consensus        76 t~~y~aPE~l~~~~~~~~~Diws~G~~l~~l~~-g~~pf~~~~~~~  120 (252)
                      +..|+|||.+.+..++.++|+|||||++++|++ |..||......+
T Consensus       185 ~~~y~aPE~~~~~~~~~~sDiwslG~il~~l~t~g~~p~~~~~~~~  230 (288)
T cd05093         185 PIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNE  230 (288)
T ss_pred             cccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHH
Confidence            668999999988889999999999999999998 899987655443

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly

>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit

Probab=99.92  E-value=2.8e-25  Score=188.27  Aligned_cols=90  Identities=29%  Similarity=0.469  Sum_probs=69.9

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCCC-----cccc
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQN-----YIVS   75 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~~-----~~~~   75 (252)
                      ||+|||++||+||||||+|||++..+                           .++|+|||++........     ...+
T Consensus       226 ~l~~lH~~~ivH~Dlkp~Nill~~~~---------------------------~~kl~DfG~a~~~~~~~~~~~~~~~~~  278 (375)
T cd05104         226 GMSFLASKNCIHRDLAARNILLTHGR---------------------------ITKICDFGLARDIRNDSNYVVKGNARL  278 (375)
T ss_pred             HHHHHHHCCeeccCCchhhEEEECCC---------------------------cEEEecCccceeccCcccccccCCCCC
Confidence            68999999999999999999995543                           456666666543322111     1234


Q ss_pred             CCCcccchhhhcCCCCccchhHhHHHHHHHHHh-CCCCCCCCC
Q 025467           76 TRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHE  117 (252)
Q Consensus        76 t~~y~aPE~l~~~~~~~~~Diws~G~~l~~l~~-g~~pf~~~~  117 (252)
                      +..|+|||++.+..++.++|||||||++|++++ |..||....
T Consensus       279 ~~~y~aPE~~~~~~~~~~sDi~slG~~l~ellt~g~~p~~~~~  321 (375)
T cd05104         279 PVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSSPYPGMP  321 (375)
T ss_pred             CcceeChhHhcCCCCCCCCCHHHHHHHHHHHHhcCCCCCCCCC
Confidence            567999999998889999999999999999998 888987544

Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce

>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11

Probab=99.92  E-value=3.7e-25  Score=178.20  Aligned_cols=140  Identities=31%  Similarity=0.545  Sum_probs=103.3

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCC---CccccCC
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ---NYIVSTR   77 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~---~~~~~t~   77 (252)
                      ||+|||++|++|+||+|+||++.. +                           .++++|||.+.......   ....++.
T Consensus       118 ~l~~lH~~~i~h~~l~~~nili~~-~---------------------------~~~l~d~g~~~~~~~~~~~~~~~~~~~  169 (260)
T cd08222         118 GVHYMHQRRILHRDLKAKNIFLKN-N---------------------------LLKIGDFGVSRLLMGSCDLATTFTGTP  169 (260)
T ss_pred             HHHHHHHcCccccCCChhheEeec-C---------------------------CEeecccCceeecCCCcccccCCCCCc
Confidence            689999999999999999999942 2                           25677777664332211   1235677


Q ss_pred             CcccchhhhcCCCCccchhHhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHHHHHHhhcCCCCCCc
Q 025467           78 HYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPE  157 (252)
Q Consensus        78 ~y~aPE~l~~~~~~~~~Diws~G~~l~~l~~g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~  157 (252)
                      .|+|||.+.+..++.++|+||+|++++++++|..||...........+..  +..|                        
T Consensus       170 ~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~~~~~~~~~~~~~~~~~~~~--~~~~------------------------  223 (260)
T cd08222         170 YYMSPEALKHQGYDSKSDIWSLGCILYEMCCLAHAFEGQNFLSVVLRIVE--GPTP------------------------  223 (260)
T ss_pred             CccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHc--CCCC------------------------
Confidence            89999999877888899999999999999999999975443222221110  1110                        


Q ss_pred             cccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCCCCCHH
Q 025467          158 GAASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAR  237 (252)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~ta~  237 (252)
                                                                         ......+.++.+++.+||..||++|||+.
T Consensus       224 ---------------------------------------------------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~  252 (260)
T cd08222         224 ---------------------------------------------------SLPETYSRQLNSIMQSMLNKDPSLRPSAA  252 (260)
T ss_pred             ---------------------------------------------------CCcchhcHHHHHHHHHHhcCChhhCcCHH
Confidence                                                               00122345889999999999999999999


Q ss_pred             HHHcCCCC
Q 025467          238 EALRHPFF  245 (252)
Q Consensus       238 e~l~hpwf  245 (252)
                      ++++||||
T Consensus       253 ~il~~~~~  260 (260)
T cd08222         253 EILRNPFI  260 (260)
T ss_pred             HHhhCCCC
Confidence            99999997

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check

>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases

Probab=99.92  E-value=3.7e-25  Score=177.22  Aligned_cols=141  Identities=30%  Similarity=0.477  Sum_probs=104.8

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCCC---ccccCC
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQN---YIVSTR   77 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~~---~~~~t~   77 (252)
                      ||.|||+.||+||||+|+||+++.+                           +.++|+|||.+........   ...++.
T Consensus       111 ~l~~lH~~~i~H~dl~p~ni~i~~~---------------------------~~~~l~d~~~~~~~~~~~~~~~~~~~~~  163 (254)
T cd06627         111 GLAYLHEQGVIHRDIKAANILTTKD---------------------------GVVKLADFGVATKLNDVSKDDASVVGTP  163 (254)
T ss_pred             HHHHHhhCCcccCCCCHHHEEECCC---------------------------CCEEEeccccceecCCCcccccccccch
Confidence            5889999999999999999999543                           4566777776654333221   235678


Q ss_pred             CcccchhhhcCCCCccchhHhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHHHHHHhhcCCCCCCc
Q 025467           78 HYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPE  157 (252)
Q Consensus        78 ~y~aPE~l~~~~~~~~~Diws~G~~l~~l~~g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~  157 (252)
                      .|+|||.+.+..++.++|+|++|++++++++|..||...+.......+..                      ....    
T Consensus       164 ~y~~pe~~~~~~~~~~~Dv~~lG~~l~~l~~g~~p~~~~~~~~~~~~~~~----------------------~~~~----  217 (254)
T cd06627         164 YWMAPEVIEMSGASTASDIWSLGCTVIELLTGNPPYYDLNPMAALFRIVQ----------------------DDHP----  217 (254)
T ss_pred             hhcCHhhhcCCCCCcchhHHHHHHHHHHHHhCCCCCCCccHHHHHHHHhc----------------------cCCC----
Confidence            89999999877788999999999999999999999975443222111100                      0000    


Q ss_pred             cccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCCCCCHH
Q 025467          158 GAASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAR  237 (252)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~ta~  237 (252)
                                                                         ......+..+.+++.+||..+|++|||+.
T Consensus       218 ---------------------------------------------------~~~~~~~~~~~~~i~~~l~~~p~~R~~~~  246 (254)
T cd06627         218 ---------------------------------------------------PLPEGISPELKDFLMQCFQKDPNLRPTAK  246 (254)
T ss_pred             ---------------------------------------------------CCCCCCCHHHHHHHHHHHhCChhhCcCHH
Confidence                                                               00122356889999999999999999999


Q ss_pred             HHHcCCCC
Q 025467          238 EALRHPFF  245 (252)
Q Consensus       238 e~l~hpwf  245 (252)
                      +++.||||
T Consensus       247 ~~l~~~~~  254 (254)
T cd06627         247 QLLKHPWI  254 (254)
T ss_pred             HHhcCCCC
Confidence            99999998

Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast

>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase

Probab=99.92  E-value=3.7e-25  Score=178.60  Aligned_cols=91  Identities=24%  Similarity=0.380  Sum_probs=69.9

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCCC----ccccC
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQN----YIVST   76 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~~----~~~~t   76 (252)
                      ||+|||+.|++||||||+||+++.++                           .++++|||.+........    ...++
T Consensus       116 ~l~~lH~~~i~H~dlkp~nil~~~~~---------------------------~~kl~df~~~~~~~~~~~~~~~~~~~~  168 (263)
T cd05052         116 AMEYLEKKNFIHRDLAARNCLVGENH---------------------------LVKVADFGLSRLMTGDTYTAHAGAKFP  168 (263)
T ss_pred             HHHHHHhCCEeecccCcceEEEcCCC---------------------------cEEeCCCccccccccceeeccCCCCCc
Confidence            58999999999999999999995544                           455566665543322111    11234


Q ss_pred             CCcccchhhhcCCCCccchhHhHHHHHHHHHh-CCCCCCCCCh
Q 025467           77 RHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHEN  118 (252)
Q Consensus        77 ~~y~aPE~l~~~~~~~~~Diws~G~~l~~l~~-g~~pf~~~~~  118 (252)
                      ..|+|||.+.+..++.++||||+||++|+|++ |..||.+.+.
T Consensus       169 ~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~  211 (263)
T cd05052         169 IKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDL  211 (263)
T ss_pred             cccCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCH
Confidence            57999999988889999999999999999998 8899876544

Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays

>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases

Probab=99.92  E-value=4.5e-25  Score=180.11  Aligned_cols=90  Identities=31%  Similarity=0.514  Sum_probs=71.5

Q ss_pred             Chhhhhc-cCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCC-CCccccCCC
Q 025467            1 MFAVMHD-LCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD-QNYIVSTRH   78 (252)
Q Consensus         1 aL~~lH~-~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~-~~~~~~t~~   78 (252)
                      ||.|||+ ++++||||+|+||++..+                           ..++++|||++...... .....|+..
T Consensus       115 ~l~~LH~~~~i~H~dl~p~nil~~~~---------------------------~~~~l~d~gl~~~~~~~~~~~~~~~~~  167 (284)
T cd06620         115 GLTYLYNVHRIMHRDIKPSNILVNSR---------------------------GQIKLCDFGVSGELINSIADTFVGTST  167 (284)
T ss_pred             HHHHHHHhcCeeccCCCHHHEEECCC---------------------------CcEEEccCCcccchhhhccCccccCcc
Confidence            5889997 699999999999999543                           34667777765432211 122467889


Q ss_pred             cccchhhhcCCCCccchhHhHHHHHHHHHhCCCCCCCCC
Q 025467           79 YRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHE  117 (252)
Q Consensus        79 y~aPE~l~~~~~~~~~Diws~G~~l~~l~~g~~pf~~~~  117 (252)
                      |+|||++.+..++.++|+||+||++|++++|..||....
T Consensus       168 ~~aPE~~~~~~~~~~~Di~slG~~l~~l~tg~~p~~~~~  206 (284)
T cd06620         168 YMSPERIQGGKYTVKSDVWSLGISIIELALGKFPFAFSN  206 (284)
T ss_pred             cCCHHHHccCCCCccchHHHHHHHHHHHHhCCCCCcccc
Confidence            999999988888999999999999999999999997543

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase

Probab=99.92  E-value=2.4e-25  Score=181.83  Aligned_cols=146  Identities=28%  Similarity=0.486  Sum_probs=106.2

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCC---CCccccCC
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD---QNYIVSTR   77 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~---~~~~~~t~   77 (252)
                      ||+|||+.||+|+||+|+||+++.++                           .++|+|||.+......   .....++.
T Consensus       128 ~L~~lH~~gi~H~dl~p~ni~i~~~~---------------------------~~~l~d~~~~~~~~~~~~~~~~~~~~~  180 (286)
T cd06614         128 GLEYLHSQNVIHRDIKSDNILLSKDG---------------------------SVKLADFGFAAQLTKEKSKRNSVVGTP  180 (286)
T ss_pred             HHHHHHhCCeeeCCCChhhEEEcCCC---------------------------CEEECccchhhhhccchhhhccccCCc
Confidence            58999999999999999999995444                           4566666655432211   11234677


Q ss_pred             CcccchhhhcCCCCccchhHhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHHHHHHhhcCCCCCCc
Q 025467           78 HYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPE  157 (252)
Q Consensus        78 ~y~aPE~l~~~~~~~~~Diws~G~~l~~l~~g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~  157 (252)
                      .|++||.+.+..++.++|+||+||++|++++|..||...........+..  ...                    .... 
T Consensus       181 ~y~~PE~~~~~~~~~~~Dv~slGvil~~l~~g~~p~~~~~~~~~~~~~~~--~~~--------------------~~~~-  237 (286)
T cd06614         181 YWMAPEVIKRKDYGPKVDIWSLGIMCIEMAEGEPPYLREPPLRALFLITT--KGI--------------------PPLK-  237 (286)
T ss_pred             ccCCHhHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHh--cCC--------------------CCCc-
Confidence            89999999888889999999999999999999999976544322221110  000                    0000 


Q ss_pred             cccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCCCCCHH
Q 025467          158 GAASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAR  237 (252)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~ta~  237 (252)
                                                                          .....+..+.+++.+||+.+|.+|||+.
T Consensus       238 ----------------------------------------------------~~~~~~~~l~~li~~~l~~~p~~Rpt~~  265 (286)
T cd06614         238 ----------------------------------------------------NPEKWSPEFKDFLNKCLVKDPEKRPSAE  265 (286)
T ss_pred             ----------------------------------------------------chhhCCHHHHHHHHHHhccChhhCcCHH
Confidence                                                                0011345789999999999999999999


Q ss_pred             HHHcCCCCCCc
Q 025467          238 EALRHPFFTRD  248 (252)
Q Consensus       238 e~l~hpwf~~~  248 (252)
                      ++++||||+..
T Consensus       266 ~il~~~~~~~~  276 (286)
T cd06614         266 ELLQHPFLKKA  276 (286)
T ss_pred             HHhhChHhhcc
Confidence            99999999874

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou

>KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms]

Probab=99.92  E-value=1.6e-25  Score=170.59  Aligned_cols=87  Identities=34%  Similarity=0.493  Sum_probs=67.5

Q ss_pred             ChhhhhccC--ccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCCC-------
Q 025467            1 MFAVMHDLC--MIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQN-------   71 (252)
Q Consensus         1 aL~~lH~~~--ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~~-------   71 (252)
                      ||++||+..  .+||||||.|||++.++                           .++++|||.+......-.       
T Consensus       139 gL~~lH~~~~~yAH~DiKP~NILls~~~---------------------------~~vl~D~GS~~~a~i~i~~~~~a~~  191 (302)
T KOG2345|consen  139 GLEALHEKEPPYAHRDIKPANILLSDSG---------------------------LPVLMDLGSATQAPIQIEGSRQALR  191 (302)
T ss_pred             HHHHHhccCCcccccCCCcceeEecCCC---------------------------ceEEEeccCccccceEeechHHHHH
Confidence            689999998  99999999999996544                           456666666543222110       


Q ss_pred             -----ccccCCCcccchhhhcC---CCCccchhHhHHHHHHHHHhCCCCCC
Q 025467           72 -----YIVSTRHYRAPEVILGL---GWTYPCDIWSVGCILVELCTGEALFQ  114 (252)
Q Consensus        72 -----~~~~t~~y~aPE~l~~~---~~~~~~Diws~G~~l~~l~~g~~pf~  114 (252)
                           ....|..|+|||.+...   ..+.++||||+||++|.|+.|..||.
T Consensus       192 lQe~a~e~Ct~pyRAPELf~vk~~~ti~ertDIWSLGCtLYa~mf~~sPfe  242 (302)
T KOG2345|consen  192 LQEWAEERCTIPYRAPELFNVKSHCTITERTDIWSLGCTLYAMMFGESPFE  242 (302)
T ss_pred             HHHHHHHhCCCcccCchheecccCcccccccchhhhhHHHHHHHHcCCcch
Confidence                 02457889999998643   46789999999999999999999995

>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C

Probab=99.92  E-value=3e-25  Score=181.83  Aligned_cols=93  Identities=26%  Similarity=0.370  Sum_probs=72.3

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCC-----CCcccc
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD-----QNYIVS   75 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~-----~~~~~~   75 (252)
                      ||+|||++||+||||||+||+++.++                           .++++|||.+......     .....+
T Consensus       135 al~~lH~~~i~H~dlkp~Nil~~~~~---------------------------~~~l~dfg~a~~~~~~~~~~~~~~~~~  187 (291)
T cd05094         135 GMVYLASQHFVHRDLATRNCLVGANL---------------------------LVKIGDFGMSRDVYSTDYYRVGGHTML  187 (291)
T ss_pred             HHHHHHhCCeeecccCcceEEEccCC---------------------------cEEECCCCcccccCCCceeecCCCCCc
Confidence            68999999999999999999995544                           4566666665432221     112345


Q ss_pred             CCCcccchhhhcCCCCccchhHhHHHHHHHHHh-CCCCCCCCChHH
Q 025467           76 TRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHENLE  120 (252)
Q Consensus        76 t~~y~aPE~l~~~~~~~~~Diws~G~~l~~l~~-g~~pf~~~~~~~  120 (252)
                      +..|+|||.+.+..++.++||||+||++|+|++ |..||.......
T Consensus       188 ~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~  233 (291)
T cd05094         188 PIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQLSNTE  233 (291)
T ss_pred             ceeecChHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHH
Confidence            678999999998889999999999999999998 999987655433

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n

>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases

Probab=99.92  E-value=3.1e-25  Score=179.72  Aligned_cols=92  Identities=23%  Similarity=0.333  Sum_probs=70.9

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCCC-----cccc
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQN-----YIVS   75 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~~-----~~~~   75 (252)
                      ||+|||++||+||||||+||++..++                           .++|+|||.++.......     ...+
T Consensus       125 aL~~lH~~~i~H~dlkp~Nil~~~~~---------------------------~~kl~dfg~~~~~~~~~~~~~~~~~~~  177 (273)
T cd05035         125 GMEYLSNRNFIHRDLAARNCMLREDM---------------------------TVCVADFGLSKKIYSGDYYRQGRIAKM  177 (273)
T ss_pred             HHHHHHhCCeeccccchheEEECCCC---------------------------eEEECCccceeeccccccccccccccC
Confidence            68999999999999999999995443                           456666666543322111     1234


Q ss_pred             CCCcccchhhhcCCCCccchhHhHHHHHHHHHh-CCCCCCCCChH
Q 025467           76 TRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHENL  119 (252)
Q Consensus        76 t~~y~aPE~l~~~~~~~~~Diws~G~~l~~l~~-g~~pf~~~~~~  119 (252)
                      +..|+|||++.+..++.++||||+||++|++++ |..||.+....
T Consensus       178 ~~~~~~pe~~~~~~~~~~~Dv~SlG~il~el~~~g~~p~~~~~~~  222 (273)
T cd05035         178 PVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGQTPYPGVENH  222 (273)
T ss_pred             CccccCHhhcccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHH
Confidence            567999999988888999999999999999999 88998765543

Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu

>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor

Probab=99.92  E-value=2.8e-25  Score=184.15  Aligned_cols=90  Identities=27%  Similarity=0.381  Sum_probs=70.6

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCCC-----cccc
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQN-----YIVS   75 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~~-----~~~~   75 (252)
                      ||+|||++||+||||||+|||++.++                           .++|+|||.++.......     ...+
T Consensus       121 ~L~~LH~~~iiH~dlkp~Nill~~~~---------------------------~~kl~DfG~a~~~~~~~~~~~~~~~~~  173 (316)
T cd05108         121 GMNYLEERRLVHRDLAARNVLVKTPQ---------------------------HVKITDFGLAKLLGADEKEYHAEGGKV  173 (316)
T ss_pred             HHHHHHhcCeeccccchhheEecCCC---------------------------cEEEccccccccccCCCcceeccCCcc
Confidence            68999999999999999999995443                           466666666654322211     1123


Q ss_pred             CCCcccchhhhcCCCCccchhHhHHHHHHHHHh-CCCCCCCCC
Q 025467           76 TRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHE  117 (252)
Q Consensus        76 t~~y~aPE~l~~~~~~~~~Diws~G~~l~~l~~-g~~pf~~~~  117 (252)
                      +..|+|||.+....++.++|||||||++|++++ |..||.+..
T Consensus       174 ~~~y~apE~~~~~~~~~~~Di~slGv~l~el~t~g~~p~~~~~  216 (316)
T cd05108         174 PIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIP  216 (316)
T ss_pred             ceeecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCC
Confidence            567999999998889999999999999999987 999997644

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor

>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase

Probab=99.92  E-value=4e-25  Score=179.76  Aligned_cols=95  Identities=23%  Similarity=0.339  Sum_probs=73.1

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCCC-----cccc
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQN-----YIVS   75 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~~-----~~~~   75 (252)
                      ||+|||+++++||||||+||++...+                        ....++++|||.++.......     ....
T Consensus       128 ~l~~LH~~~ivH~dlkp~nil~~~~~------------------------~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~  183 (277)
T cd05036         128 GCKYLEENHFIHRDIAARNCLLTCKG------------------------PGRVAKIADFGMARDIYRASYYRKGGRAML  183 (277)
T ss_pred             HHHHHHHCCEeecccchheEEEeccC------------------------CCcceEeccCccccccCCccceecCCCCCc
Confidence            58999999999999999999996532                        123467778877764422111     1123


Q ss_pred             CCCcccchhhhcCCCCccchhHhHHHHHHHHHh-CCCCCCCCChH
Q 025467           76 TRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHENL  119 (252)
Q Consensus        76 t~~y~aPE~l~~~~~~~~~Diws~G~~l~~l~~-g~~pf~~~~~~  119 (252)
                      +..|+|||++.+..++.++||||+||++|++++ |..||.+.+..
T Consensus       184 ~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~~g~~pf~~~~~~  228 (277)
T cd05036         184 PIKWMPPEAFLDGIFTSKTDVWSFGVLLWEIFSLGYMPYPGRTNQ  228 (277)
T ss_pred             cHhhCCHHHHhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCHH
Confidence            457999999998889999999999999999997 99999865543

Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well

>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]

Probab=99.92  E-value=1.3e-25  Score=202.15  Aligned_cols=164  Identities=26%  Similarity=0.381  Sum_probs=108.9

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccC-CCCCccccCCCc
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYER-PDQNYIVSTRHY   79 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~-~~~~~~~~t~~y   79 (252)
                      ||+|+|++|||||||||.||+++..+.+||+|||++..............       .+.+.-.... ...+..+||..|
T Consensus       709 GLaYIH~~giIHRDLKP~NIFLd~~~~VKIGDFGLAt~~~~~~~~~d~~~-------~~~~~~~g~~~~~~Ts~VGTalY  781 (1351)
T KOG1035|consen  709 GLAYIHDQGIIHRDLKPRNIFLDSRNSVKIGDFGLATDLKENLESIDQDL-------SFSTNRAGSNDGDLTSQVGTALY  781 (1351)
T ss_pred             HHHHHHhCceeeccCCcceeEEcCCCCeeecccccchhhhhhhhhHhhcc-------CccccccCCCCcccccccceeee
Confidence            68999999999999999999999999999999998865332211111000       0011111111 133446899999


Q ss_pred             ccchhhhcCC---CCccchhHhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHHHHHHhhcCCCCCC
Q 025467           80 RAPEVILGLG---WTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWP  156 (252)
Q Consensus        80 ~aPE~l~~~~---~~~~~Diws~G~~l~~l~~g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~  156 (252)
                      +|||++.+..   |+.++||||+|++++||+.   ||...  .+-...+..                    .+++.++.+
T Consensus       782 vAPEll~~~~~~~Yn~KiDmYSLGIVlFEM~y---PF~Ts--MERa~iL~~--------------------LR~g~iP~~  836 (1351)
T KOG1035|consen  782 VAPELLSDTSSNKYNSKIDMYSLGIVLFEMLY---PFGTS--MERASILTN--------------------LRKGSIPEP  836 (1351)
T ss_pred             ecHHHhcccccccccchhhhHHHHHHHHHHhc---cCCch--HHHHHHHHh--------------------cccCCCCCC
Confidence            9999998754   9999999999999999964   45422  111111111                    112222222


Q ss_pred             ccccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCCCCCH
Q 025467          157 EGAASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTA  236 (252)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~ta  236 (252)
                      ..                                                   .++..-+.-..+|++||+.||++||||
T Consensus       837 ~~---------------------------------------------------f~~~~~~~e~slI~~Ll~hdP~kRPtA  865 (1351)
T KOG1035|consen  837 AD---------------------------------------------------FFDPEHPEEASLIRWLLSHDPSKRPTA  865 (1351)
T ss_pred             cc---------------------------------------------------cccccchHHHHHHHHHhcCCCccCCCH
Confidence            11                                                   012222455789999999999999999


Q ss_pred             HHHHcCCCCCC
Q 025467          237 REALRHPFFTR  247 (252)
Q Consensus       237 ~e~l~hpwf~~  247 (252)
                      .|+|++.||..
T Consensus       866 ~eLL~s~llpp  876 (1351)
T KOG1035|consen  866 TELLNSELLPP  876 (1351)
T ss_pred             HHHhhccCCCc
Confidence            99999999973

>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=99.92  E-value=6.1e-25  Score=176.92  Aligned_cols=95  Identities=24%  Similarity=0.358  Sum_probs=74.6

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCCCccccCCCcc
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYR   80 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~~~~~~t~~y~   80 (252)
                      ||+|||++||+||||||+||+++.++..+..++                   ..++++|||.+....... ...++..|+
T Consensus       112 ~l~~lH~~~iiH~dlkp~nili~~~~~~~~~~~-------------------~~~~l~d~g~~~~~~~~~-~~~~~~~y~  171 (258)
T cd05078         112 ALHFLEDKGLTHGNVCAKNVLLIREEDRKTGNP-------------------PFIKLSDPGISITVLPKE-ILLERIPWV  171 (258)
T ss_pred             HHHHHHHCCeecCCCccceEEEecccccccCCC-------------------ceEEecccccccccCCch-hccccCCcc
Confidence            689999999999999999999987665443332                   346889999876544322 236788899


Q ss_pred             cchhhhcC-CCCccchhHhHHHHHHHHHhCC-CCCCC
Q 025467           81 APEVILGL-GWTYPCDIWSVGCILVELCTGE-ALFQT  115 (252)
Q Consensus        81 aPE~l~~~-~~~~~~Diws~G~~l~~l~~g~-~pf~~  115 (252)
                      |||++.+. .++.++|+||+||++|++++|. .||..
T Consensus       172 aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~~~~~~  208 (258)
T cd05078         172 PPECIENPQNLSLAADKWSFGTTLWEIFSGGDKPLSA  208 (258)
T ss_pred             CchhccCCCCCCchhhHHHHHHHHHHHHcCCCCChhh
Confidence            99999864 4788999999999999999985 66544

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity

>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins

Probab=99.92  E-value=2.8e-25  Score=179.03  Aligned_cols=147  Identities=28%  Similarity=0.491  Sum_probs=106.5

Q ss_pred             Chhhhhc-cCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCCC---ccccC
Q 025467            1 MFAVMHD-LCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQN---YIVST   76 (252)
Q Consensus         1 aL~~lH~-~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~~---~~~~t   76 (252)
                      ||+|||+ .|++|+||+|+||+++.                           .+.++++|||.+........   ...++
T Consensus       111 ~l~~lh~~~~~~H~~l~~~ni~~~~---------------------------~~~~~l~df~~~~~~~~~~~~~~~~~~~  163 (264)
T cd06623         111 GLDYLHTKRHIIHRDIKPSNLLINS---------------------------KGEVKIADFGISKVLENTLDQCNTFVGT  163 (264)
T ss_pred             HHHHHhccCCCccCCCCHHHEEECC---------------------------CCCEEEccCccceecccCCCcccceeec
Confidence            5899999 99999999999999954                           44566777776654322211   23567


Q ss_pred             CCcccchhhhcCCCCccchhHhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHHHHHHhhcCCCCCC
Q 025467           77 RHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWP  156 (252)
Q Consensus        77 ~~y~aPE~l~~~~~~~~~Diws~G~~l~~l~~g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~  156 (252)
                      ..|+|||.+....++.++|+||+|+++|++++|..||...........+..+...                   ..... 
T Consensus       164 ~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~-------------------~~~~~-  223 (264)
T cd06623         164 VTYMSPERIQGESYSYAADIWSLGLTLLECALGKFPFLPPGQPSFFELMQAICDG-------------------PPPSL-  223 (264)
T ss_pred             ccccCHhhhCCCCCCchhhHHHHHHHHHHHHhCCCCCccccccCHHHHHHHHhcC-------------------CCCCC-
Confidence            8899999998888899999999999999999999999765421111111111000                   00000 


Q ss_pred             ccccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhcccc-chhhHHHHHHHhccCCCCCCCC
Q 025467          157 EGAASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDH-SAGDLTHLLQGLLRYDPTDRLT  235 (252)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ll~~~L~~dP~~R~t  235 (252)
                                                                            ... .+..+.+++.+||..+|++|||
T Consensus       224 ------------------------------------------------------~~~~~~~~l~~li~~~l~~~p~~R~~  249 (264)
T cd06623         224 ------------------------------------------------------PAEEFSPEFRDFISACLQKDPKKRPS  249 (264)
T ss_pred             ------------------------------------------------------CcccCCHHHHHHHHHHccCChhhCCC
Confidence                                                                  011 4568999999999999999999


Q ss_pred             HHHHHcCCCCCCc
Q 025467          236 AREALRHPFFTRD  248 (252)
Q Consensus       236 a~e~l~hpwf~~~  248 (252)
                      +.++++||||+.-
T Consensus       250 ~~~ll~~~~~~~~  262 (264)
T cd06623         250 AAELLQHPFIKKA  262 (264)
T ss_pred             HHHHHhCHHHHhc
Confidence            9999999999754

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of

>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor

Probab=99.92  E-value=5.4e-25  Score=178.96  Aligned_cols=91  Identities=25%  Similarity=0.353  Sum_probs=70.2

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCC-----Ccccc
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ-----NYIVS   75 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~-----~~~~~   75 (252)
                      ||+|||+.|++||||||+||+++.++                           .++++|||.+.......     ....+
T Consensus       131 ~l~~lH~~~~vH~dlkp~Nil~~~~~---------------------------~~~l~dfg~~~~~~~~~~~~~~~~~~~  183 (277)
T cd05062         131 GMAYLNANKFVHRDLAARNCMVAEDF---------------------------TVKIGDFGMTRDIYETDYYRKGGKGLL  183 (277)
T ss_pred             HHHHHHHCCcccCCcchheEEEcCCC---------------------------CEEECCCCCccccCCcceeecCCCCcc
Confidence            68999999999999999999996544                           45666666554322111     11234


Q ss_pred             CCCcccchhhhcCCCCccchhHhHHHHHHHHHh-CCCCCCCCCh
Q 025467           76 TRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHEN  118 (252)
Q Consensus        76 t~~y~aPE~l~~~~~~~~~Diws~G~~l~~l~~-g~~pf~~~~~  118 (252)
                      +..|+|||.+.+..++.++|+||+||++|++++ |..||.+...
T Consensus       184 ~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~p~~~~~~  227 (277)
T cd05062         184 PVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGMSN  227 (277)
T ss_pred             CHhhcChhHhhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCH
Confidence            677999999988889999999999999999998 7888876544

Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh

>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2

Probab=99.92  E-value=5.2e-25  Score=179.27  Aligned_cols=90  Identities=28%  Similarity=0.401  Sum_probs=70.0

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCCC-----cccc
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQN-----YIVS   75 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~~-----~~~~   75 (252)
                      ||+|||+.||+||||||+|||+..++                           .++|+|||.++.......     ...+
T Consensus       121 ~L~~lH~~~iiH~dlkp~Nil~~~~~---------------------------~~kL~dfG~~~~~~~~~~~~~~~~~~~  173 (279)
T cd05109         121 GMSYLEEVRLVHRDLAARNVLVKSPN---------------------------HVKITDFGLARLLDIDETEYHADGGKV  173 (279)
T ss_pred             HHHHHHHCCeeccccccceEEEcCCC---------------------------cEEECCCCceeecccccceeecCCCcc
Confidence            68999999999999999999995443                           456666666654322111     1133


Q ss_pred             CCCcccchhhhcCCCCccchhHhHHHHHHHHHh-CCCCCCCCC
Q 025467           76 TRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHE  117 (252)
Q Consensus        76 t~~y~aPE~l~~~~~~~~~Diws~G~~l~~l~~-g~~pf~~~~  117 (252)
                      +..|+|||.+.+..++.++||||+||++|++++ |..||....
T Consensus       174 ~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~  216 (279)
T cd05109         174 PIKWMALESILHRRFTHQSDVWSYGVTVWELMTFGAKPYDGIP  216 (279)
T ss_pred             chhhCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCC
Confidence            567999999988889999999999999999998 889987544

Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve

>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3

Probab=99.92  E-value=4.3e-25  Score=179.59  Aligned_cols=144  Identities=29%  Similarity=0.427  Sum_probs=105.7

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCC---CCccccCC
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD---QNYIVSTR   77 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~---~~~~~~t~   77 (252)
                      ||.|||+.|++|+||+|+||+++.+                           +.++++|||.+......   .....++.
T Consensus       113 ~l~~lh~~~i~h~dl~p~Ni~i~~~---------------------------~~~~l~dfg~~~~~~~~~~~~~~~~~~~  165 (277)
T cd06641         113 GLDYLHSEKKIHRDIKAANVLLSEH---------------------------GEVKLADFGVAGQLTDTQIKRNTFVGTP  165 (277)
T ss_pred             HHHHHccCCeecCCCCHHhEEECCC---------------------------CCEEEeecccceecccchhhhccccCCc
Confidence            5789999999999999999999543                           44677777766433221   11235678


Q ss_pred             CcccchhhhcCCCCccchhHhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHHHHHHhhcCCCCCCc
Q 025467           78 HYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPE  157 (252)
Q Consensus        78 ~y~aPE~l~~~~~~~~~Diws~G~~l~~l~~g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~  157 (252)
                      .|+|||.+.+..++.++|+||+||++|++++|..||...........+..  +..                    .    
T Consensus       166 ~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~--~~~--------------------~----  219 (277)
T cd06641         166 FWMAPEVIKQSAYDSKADIWSLGITAIELAKGEPPHSELHPMKVLFLIPK--NNP--------------------P----  219 (277)
T ss_pred             cccChhhhccCCCCchhhHHHHHHHHHHHHcCCCCCCccchHHHHHHHhc--CCC--------------------C----
Confidence            89999999887888999999999999999999999865433222111100  000                    0    


Q ss_pred             cccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCCCCCHH
Q 025467          158 GAASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAR  237 (252)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~ta~  237 (252)
                                                                         ......+.++.+++.+||..+|.+||++.
T Consensus       220 ---------------------------------------------------~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~  248 (277)
T cd06641         220 ---------------------------------------------------TLEGNYSKPLKEFVEACLNKEPSFRPTAK  248 (277)
T ss_pred             ---------------------------------------------------CCCcccCHHHHHHHHHHccCChhhCcCHH
Confidence                                                               00112346789999999999999999999


Q ss_pred             HHHcCCCCCCc
Q 025467          238 EALRHPFFTRD  248 (252)
Q Consensus       238 e~l~hpwf~~~  248 (252)
                      ++++||||...
T Consensus       249 ~~l~~~~~~~~  259 (277)
T cd06641         249 ELLKHKFIVRF  259 (277)
T ss_pred             HHHhCHHHhhh
Confidence            99999999754

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int

>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase

Probab=99.92  E-value=6e-25  Score=176.21  Aligned_cols=143  Identities=31%  Similarity=0.496  Sum_probs=105.2

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCC-----Ccccc
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ-----NYIVS   75 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~-----~~~~~   75 (252)
                      ||+|||+.|++|+||+|+||+++..                           ..++|+|||.+.......     ....+
T Consensus       113 ~l~~lh~~~~~h~dl~p~ni~i~~~---------------------------~~~~l~d~~~~~~~~~~~~~~~~~~~~~  165 (260)
T cd06606         113 GLAYLHSNGIVHRDIKGANILVDSD---------------------------GVVKLADFGCAKRLGDIETGEGTGSVRG  165 (260)
T ss_pred             HHHHHHHCCccccCCCHHHEEEcCC---------------------------CCEEEcccccEEecccccccccccCCCC
Confidence            5899999999999999999999543                           446666776665433321     23467


Q ss_pred             CCCcccchhhhcCCCCccchhHhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHHHHHHhhcCCCCC
Q 025467           76 TRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDW  155 (252)
Q Consensus        76 t~~y~aPE~l~~~~~~~~~Diws~G~~l~~l~~g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~  155 (252)
                      +..|++||.+.+..++.++|+||+|++++++++|..||....+..  ..+......                  .. .  
T Consensus       166 ~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~--~~~~~~~~~------------------~~-~--  222 (260)
T cd06606         166 TPYWMAPEVIRGEEYGRAADIWSLGCTVIEMATGKPPWSELGNPM--AALYKIGSS------------------GE-P--  222 (260)
T ss_pred             CccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchH--HHHHhcccc------------------CC-C--
Confidence            788999999988888999999999999999999999997655211  111110000                  00 0  


Q ss_pred             CccccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCCCCC
Q 025467          156 PEGAASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLT  235 (252)
Q Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~t  235 (252)
                                                                          .......+..+.+++.+||+.||.+|||
T Consensus       223 ----------------------------------------------------~~~~~~~~~~l~~~i~~~l~~~p~~Rp~  250 (260)
T cd06606         223 ----------------------------------------------------PEIPEHLSEEAKDFLRKCLRRDPKKRPT  250 (260)
T ss_pred             ----------------------------------------------------cCCCcccCHHHHHHHHHhCcCChhhCCC
Confidence                                                                0001223568999999999999999999


Q ss_pred             HHHHHcCCCC
Q 025467          236 AREALRHPFF  245 (252)
Q Consensus       236 a~e~l~hpwf  245 (252)
                      +.+++.||||
T Consensus       251 ~~~ll~~~~~  260 (260)
T cd06606         251 ADELLQHPFL  260 (260)
T ss_pred             HHHHhhCCCC
Confidence            9999999997

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK

>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=99.92  E-value=7.3e-25  Score=176.94  Aligned_cols=95  Identities=24%  Similarity=0.342  Sum_probs=72.5

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCCCccccCCCcc
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYR   80 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~~~~~~t~~y~   80 (252)
                      ||+|||++||+||||||+|||+..++...                    .....+++.|||.+....... ...++..|+
T Consensus       117 ~l~~lH~~~ivH~dlkp~Nill~~~~~~~--------------------~~~~~~~l~d~g~~~~~~~~~-~~~~~~~y~  175 (262)
T cd05077         117 ALSYLEDKDLVHGNVCTKNILLAREGIDG--------------------ECGPFIKLSDPGIPITVLSRQ-ECVERIPWI  175 (262)
T ss_pred             HHHHhhhCCeECCCCCcccEEEecCCccC--------------------CCCceeEeCCCCCCccccCcc-ccccccccc
Confidence            68999999999999999999996543211                    122347888999876543322 235778899


Q ss_pred             cchhhh-cCCCCccchhHhHHHHHHHHH-hCCCCCCCC
Q 025467           81 APEVIL-GLGWTYPCDIWSVGCILVELC-TGEALFQTH  116 (252)
Q Consensus        81 aPE~l~-~~~~~~~~Diws~G~~l~~l~-~g~~pf~~~  116 (252)
                      |||.+. +..++.++||||+||++|+++ .|..||...
T Consensus       176 aPE~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~  213 (262)
T cd05077         176 APECVEDSKNLSIAADKWSFGTTLWEICYNGEIPLKDK  213 (262)
T ss_pred             ChhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCc
Confidence            999887 456889999999999999997 577887653

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom

>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase

Probab=99.92  E-value=7.2e-25  Score=176.34  Aligned_cols=93  Identities=25%  Similarity=0.392  Sum_probs=71.4

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCC------Cccc
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ------NYIV   74 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~------~~~~   74 (252)
                      ||+|||++||+||||||.||++..++                           .++++|||.+.......      ....
T Consensus       107 al~~lH~~~i~H~dlkp~nill~~~~---------------------------~~kl~Dfg~~~~~~~~~~~~~~~~~~~  159 (257)
T cd05116         107 GMKYLEETNFVHRDLAARNVLLVTQH---------------------------YAKISDFGLSKALGADENYYKAKTHGK  159 (257)
T ss_pred             HHHHHHHCCEeecccchhhEEEcCCC---------------------------eEEECCCccccccCCCCCeeeecCCCC
Confidence            68999999999999999999995443                           45666666654332211      1123


Q ss_pred             cCCCcccchhhhcCCCCccchhHhHHHHHHHHHh-CCCCCCCCChHH
Q 025467           75 STRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHENLE  120 (252)
Q Consensus        75 ~t~~y~aPE~l~~~~~~~~~Diws~G~~l~~l~~-g~~pf~~~~~~~  120 (252)
                      ++..|+|||.+....++.++|+||+||++|++++ |..||.+.....
T Consensus       160 ~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~  206 (257)
T cd05116         160 WPVKWYAPECMNYYKFSSKSDVWSFGVLMWEAFSYGQKPYKGMKGNE  206 (257)
T ss_pred             CCccccCHhHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHHH
Confidence            3568999999987788899999999999999998 999998665443

Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio

>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3

Probab=99.92  E-value=4.4e-25  Score=177.26  Aligned_cols=90  Identities=33%  Similarity=0.578  Sum_probs=72.8

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCC---CccccCC
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ---NYIVSTR   77 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~---~~~~~t~   77 (252)
                      ||+|||++||+|+||||+||+++.+                           ..++++|||.+.......   ....++.
T Consensus       112 al~~lH~~~i~H~dl~p~nili~~~---------------------------~~~~l~dfg~~~~~~~~~~~~~~~~~~~  164 (255)
T cd08219         112 GVQHIHEKRVLHRDIKSKNIFLTQN---------------------------GKVKLGDFGSARLLTSPGAYACTYVGTP  164 (255)
T ss_pred             HHHHHhhCCcccCCCCcceEEECCC---------------------------CcEEEcccCcceeecccccccccccCCc
Confidence            6899999999999999999999544                           446667777665432221   1236788


Q ss_pred             CcccchhhhcCCCCccchhHhHHHHHHHHHhCCCCCCCCC
Q 025467           78 HYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHE  117 (252)
Q Consensus        78 ~y~aPE~l~~~~~~~~~Diws~G~~l~~l~~g~~pf~~~~  117 (252)
                      .|+|||++.+..++.++|+||+|+++|+|++|..||...+
T Consensus       165 ~~~aPE~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~  204 (255)
T cd08219         165 YYVPPEIWENMPYNNKSDIWSLGCILYELCTLKHPFQANS  204 (255)
T ss_pred             cccCHHHHccCCcCchhhhhhhchhheehhhccCCCCCCC
Confidence            8999999988888999999999999999999999997654

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati

>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains

Probab=99.92  E-value=1.3e-24  Score=174.35  Aligned_cols=141  Identities=29%  Similarity=0.513  Sum_probs=105.3

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCC-CCccccCCCc
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD-QNYIVSTRHY   79 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~-~~~~~~t~~y   79 (252)
                      ||+|||+.|++|+||+|.||+++.+                           ..+++.|||.+...... .....++..|
T Consensus       115 al~~lh~~~i~h~~l~~~ni~~~~~---------------------------~~~kl~d~g~~~~~~~~~~~~~~~~~~~  167 (256)
T cd08530         115 GLQALHEQKILHRDLKSANILLVAN---------------------------DLVKIGDLGISKVLKKNMAKTQIGTPHY  167 (256)
T ss_pred             HHHHHhhCCcccCCCCcceEEEecC---------------------------CcEEEeeccchhhhccCCcccccCCccc
Confidence            6899999999999999999999543                           34677777766543322 1223577889


Q ss_pred             ccchhhhcCCCCccchhHhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHHHHHHhhcCCCCCCccc
Q 025467           80 RAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGA  159 (252)
Q Consensus        80 ~aPE~l~~~~~~~~~Diws~G~~l~~l~~g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~  159 (252)
                      ++||.+.+..++.++|+||+|++++++++|..||...+.......+..  +..+                          
T Consensus       168 ~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~--~~~~--------------------------  219 (256)
T cd08530         168 MAPEVWKGRPYSYKSDIWSLGCLLYEMATFAPPFEARSMQDLRYKVQR--GKYP--------------------------  219 (256)
T ss_pred             cCHHHHCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhc--CCCC--------------------------
Confidence            999999888888999999999999999999999976654322211100  0000                          


Q ss_pred             cchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCCCCCHHHH
Q 025467          160 ASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREA  239 (252)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~ta~e~  239 (252)
                                                                       ......+.++.+++.+||..+|++|||+.++
T Consensus       220 -------------------------------------------------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~  250 (256)
T cd08530         220 -------------------------------------------------PIPPIYSQDLQNFIRSMLQVKPKLRPNCDKI  250 (256)
T ss_pred             -------------------------------------------------CCchhhCHHHHHHHHHHcCCCcccCCCHHHH
Confidence                                                             0001234578999999999999999999999


Q ss_pred             HcCCCC
Q 025467          240 LRHPFF  245 (252)
Q Consensus       240 l~hpwf  245 (252)
                      ++||+.
T Consensus       251 l~~p~~  256 (256)
T cd08530         251 LASPAV  256 (256)
T ss_pred             hcCCCC
Confidence            999974

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an

>KOG0584 consensus Serine/threonine protein kinase [General function prediction only]

Probab=99.92  E-value=3.4e-25  Score=187.86  Aligned_cols=145  Identities=23%  Similarity=0.410  Sum_probs=116.8

Q ss_pred             ChhhhhccC--ccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCCC-ccccCC
Q 025467            1 MFAVMHDLC--MIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQN-YIVSTR   77 (252)
Q Consensus         1 aL~~lH~~~--ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~~-~~~~t~   77 (252)
                      +|.|||++.  |+|||||-+||+++.                          ..+.+||+|+|+|........ ..+|||
T Consensus       155 GL~yLHs~~PPIIHRDLKCDNIFinG--------------------------~~G~VKIGDLGLAtl~r~s~aksvIGTP  208 (632)
T KOG0584|consen  155 GLVYLHSQDPPIIHRDLKCDNIFVNG--------------------------NLGEVKIGDLGLATLLRKSHAKSVIGTP  208 (632)
T ss_pred             HhhhhhcCCCCccccccccceEEEcC--------------------------CcCceeecchhHHHHhhccccceeccCc
Confidence            589999987  999999999999964                          356789999999876655443 368999


Q ss_pred             CcccchhhhcCCCCccchhHhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHHHHHHhhcCCCCCCc
Q 025467           78 HYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPE  157 (252)
Q Consensus        78 ~y~aPE~l~~~~~~~~~Diws~G~~l~~l~~g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~  157 (252)
                      -|||||+.. ..|+...||||||.++.+|+|+..||..+.+.-++.+-+ +.|-.|..+                     
T Consensus       209 EFMAPEmYE-E~YnE~VDVYaFGMCmLEMvT~eYPYsEC~n~AQIYKKV-~SGiKP~sl---------------------  265 (632)
T KOG0584|consen  209 EFMAPEMYE-ENYNELVDVYAFGMCMLEMVTSEYPYSECTNPAQIYKKV-TSGIKPAAL---------------------  265 (632)
T ss_pred             cccChHHHh-hhcchhhhhhhhhHHHHHHHhccCChhhhCCHHHHHHHH-HcCCCHHHh---------------------
Confidence            999999987 689999999999999999999999998887665543321 123333222                     


Q ss_pred             cccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCCCCCHH
Q 025467          158 GAASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAR  237 (252)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~ta~  237 (252)
                                                                           ....++++++||.+||.. .++|+||.
T Consensus       266 -----------------------------------------------------~kV~dPevr~fIekCl~~-~~~R~sa~  291 (632)
T KOG0584|consen  266 -----------------------------------------------------SKVKDPEVREFIEKCLAT-KSERLSAK  291 (632)
T ss_pred             -----------------------------------------------------hccCCHHHHHHHHHHhcC-chhccCHH
Confidence                                                                 012346999999999999 99999999


Q ss_pred             HHHcCCCCCCc
Q 025467          238 EALRHPFFTRD  248 (252)
Q Consensus       238 e~l~hpwf~~~  248 (252)
                      |+|+||||..+
T Consensus       292 eLL~d~Ff~~d  302 (632)
T KOG0584|consen  292 ELLKDPFFDED  302 (632)
T ss_pred             HHhhChhhccc
Confidence            99999999986

>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn

Probab=99.92  E-value=6.6e-25  Score=176.84  Aligned_cols=93  Identities=29%  Similarity=0.403  Sum_probs=71.2

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCC----CccccC
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ----NYIVST   76 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~----~~~~~t   76 (252)
                      ||+|||+.+++||||||+||+++.++.                           +++.|||.+.......    ....++
T Consensus       115 ~l~~LH~~~i~H~dl~p~nili~~~~~---------------------------~~l~dfg~~~~~~~~~~~~~~~~~~~  167 (261)
T cd05072         115 GMAYIERKNYIHRDLRAANVLVSESLM---------------------------CKIADFGLARVIEDNEYTAREGAKFP  167 (261)
T ss_pred             HHHHHHHCCeeccccchhhEEecCCCc---------------------------EEECCCccceecCCCceeccCCCccc
Confidence            689999999999999999999965444                           5555665554332211    112345


Q ss_pred             CCcccchhhhcCCCCccchhHhHHHHHHHHHh-CCCCCCCCChHH
Q 025467           77 RHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHENLE  120 (252)
Q Consensus        77 ~~y~aPE~l~~~~~~~~~Diws~G~~l~~l~~-g~~pf~~~~~~~  120 (252)
                      ..|+|||.+.+..++.++|+||+||++|++++ |..||.......
T Consensus       168 ~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~~  212 (261)
T cd05072         168 IKWTAPEAINFGSFTIKSDVWSFGILLYEIVTYGKIPYPGMSNSD  212 (261)
T ss_pred             eecCCHHHhccCCCChhhhhhhhHHHHHHHHccCCCCCCCCCHHH
Confidence            67999999988888999999999999999998 999997655433

Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa

>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase

Probab=99.92  E-value=8.9e-25  Score=175.65  Aligned_cols=96  Identities=29%  Similarity=0.452  Sum_probs=72.5

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCC----CccccC
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ----NYIVST   76 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~----~~~~~t   76 (252)
                      ||+|||++||+||||||+||+++.++                           .++++|||.+.......    ....++
T Consensus       112 ~l~~lH~~~i~H~dl~p~ni~i~~~~---------------------------~~kl~d~g~~~~~~~~~~~~~~~~~~~  164 (256)
T cd05114         112 GMEYLERNSFIHRDLAARNCLVSSTG---------------------------VVKVSDFGMTRYVLDDEYTSSSGAKFP  164 (256)
T ss_pred             HHHHHHHCCccccccCcceEEEcCCC---------------------------eEEECCCCCccccCCCceeccCCCCCc
Confidence            68999999999999999999995544                           45666666554322111    111345


Q ss_pred             CCcccchhhhcCCCCccchhHhHHHHHHHHHh-CCCCCCCCChHHHHH
Q 025467           77 RHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHENLEHLA  123 (252)
Q Consensus        77 ~~y~aPE~l~~~~~~~~~Diws~G~~l~~l~~-g~~pf~~~~~~~~~~  123 (252)
                      ..|+|||.+.+..++.++|+||+||++|++++ |..||...+..+.+.
T Consensus       165 ~~y~aPE~~~~~~~~~~~Di~s~G~~l~el~~~g~~p~~~~~~~~~~~  212 (256)
T cd05114         165 VKWSPPEVFNFSKYSSKSDVWSFGVLMWEVFTEGKMPFEKKSNYEVVE  212 (256)
T ss_pred             hhhCChhhcccCccchhhhhHHHHHHHHHHHcCCCCCCCCCCHHHHHH
Confidence            67999999988888999999999999999999 899997765544433

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h

>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk

Probab=99.92  E-value=9.6e-25  Score=175.85  Aligned_cols=93  Identities=29%  Similarity=0.431  Sum_probs=71.4

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCC----CccccC
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ----NYIVST   76 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~----~~~~~t   76 (252)
                      ||+|||++||+||||||+||+++.++                           .++++|||.+.......    ....++
T Consensus       114 al~~lH~~~i~H~di~p~Nili~~~~---------------------------~~~l~dfg~~~~~~~~~~~~~~~~~~~  166 (260)
T cd05070         114 GMAYIERMNYIHRDLRSANILVGDGL---------------------------VCKIADFGLARLIEDNEYTARQGAKFP  166 (260)
T ss_pred             HHHHHHHCCcccCCCccceEEEeCCc---------------------------eEEeCCceeeeeccCcccccccCCCCC
Confidence            68999999999999999999995544                           45666666654332211    112345


Q ss_pred             CCcccchhhhcCCCCccchhHhHHHHHHHHHh-CCCCCCCCChHH
Q 025467           77 RHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHENLE  120 (252)
Q Consensus        77 ~~y~aPE~l~~~~~~~~~Diws~G~~l~~l~~-g~~pf~~~~~~~  120 (252)
                      ..|+|||.+.+..++.++|+|||||++|++++ |..||.+.+..+
T Consensus       167 ~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~~  211 (260)
T cd05070         167 IKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMNNRE  211 (260)
T ss_pred             ccccChHHHhcCCCcchhhhHHHHHHHHHHHhcCCCCCCCCCHHH
Confidence            67999999988888999999999999999999 889997655433

Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r

>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases

Probab=99.92  E-value=1.4e-24  Score=174.49  Aligned_cols=93  Identities=26%  Similarity=0.340  Sum_probs=72.7

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCC-----CCcccc
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD-----QNYIVS   75 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~-----~~~~~~   75 (252)
                      ||+|||++|++|+||+|+||+++.++                           .++++|||.+......     .....+
T Consensus       117 al~~lH~~~i~H~di~p~nili~~~~---------------------------~~~l~dfg~~~~~~~~~~~~~~~~~~~  169 (262)
T cd00192         117 GMEYLASKKFVHRDLAARNCLVGEDL---------------------------VVKISDFGLSRDVYDDDYYRKKTGGKL  169 (262)
T ss_pred             HHHHHHcCCcccCccCcceEEECCCC---------------------------cEEEcccccccccccccccccccCCCc
Confidence            68999999999999999999995544                           4566666665543322     112346


Q ss_pred             CCCcccchhhhcCCCCccchhHhHHHHHHHHHh-CCCCCCCCChHH
Q 025467           76 TRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHENLE  120 (252)
Q Consensus        76 t~~y~aPE~l~~~~~~~~~Diws~G~~l~~l~~-g~~pf~~~~~~~  120 (252)
                      +..|+|||.+....++.++|+||+||+++++++ |..||......+
T Consensus       170 ~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~  215 (262)
T cd00192         170 PIRWMAPESLKDGIFTSKSDVWSFGVLLWEIFTLGATPYPGLSNEE  215 (262)
T ss_pred             CccccCHHHhccCCcchhhccHHHHHHHHHHHhcCCCCCCCCCHHH
Confidence            778999999988888999999999999999999 689998764433

Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan

>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=99.92  E-value=9.8e-25  Score=176.24  Aligned_cols=141  Identities=26%  Similarity=0.420  Sum_probs=101.9

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCC------CCCccc
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERP------DQNYIV   74 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~------~~~~~~   74 (252)
                      ||+|||++|++|+||||+||+++.++.                           ++++|||.+.....      ......
T Consensus       118 al~~LH~~~i~H~dl~p~ni~i~~~~~---------------------------~~l~dfg~~~~~~~~~~~~~~~~~~~  170 (264)
T cd06653         118 GVSYLHSNMIVHRDIKGANILRDSAGN---------------------------VKLGDFGASKRIQTICMSGTGIKSVT  170 (264)
T ss_pred             HHHHHHhCCEecCCCCHHHEEEcCCCC---------------------------EEECccccccccccccccCccccccC
Confidence            689999999999999999999965544                           45555555432211      111235


Q ss_pred             cCCCcccchhhhcCCCCccchhHhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHHHHHHhhcCCCC
Q 025467           75 STRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLD  154 (252)
Q Consensus        75 ~t~~y~aPE~l~~~~~~~~~Diws~G~~l~~l~~g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~  154 (252)
                      ++..|+|||.+.+..++.++|+||+||+++++++|..||..........+   .....+                  .  
T Consensus       171 ~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~---~~~~~~------------------~--  227 (264)
T cd06653         171 GTPYWMSPEVISGEGYGRKADVWSVACTVVEMLTEKPPWAEYEAMAAIFK---IATQPT------------------K--  227 (264)
T ss_pred             CcccccCHhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCccCHHHHHHH---HHcCCC------------------C--
Confidence            78889999999888888999999999999999999999975443322221   111000                  0  


Q ss_pred             CCccccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCCCC
Q 025467          155 WPEGAASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRL  234 (252)
Q Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~  234 (252)
                                                                           .......++.+.+++.+||+ +|.+||
T Consensus       228 -----------------------------------------------------~~~p~~~~~~~~~~i~~~l~-~~~~r~  253 (264)
T cd06653         228 -----------------------------------------------------PMLPDGVSDACRDFLKQIFV-EEKRRP  253 (264)
T ss_pred             -----------------------------------------------------CCCCcccCHHHHHHHHHHhc-CcccCc
Confidence                                                                 00112345689999999999 579999


Q ss_pred             CHHHHHcCCCC
Q 025467          235 TAREALRHPFF  245 (252)
Q Consensus       235 ta~e~l~hpwf  245 (252)
                      |+.+++.|||.
T Consensus       254 ~~~~~~~~~~~  264 (264)
T cd06653         254 TAEFLLRHPFV  264 (264)
T ss_pred             cHHHHhcCCCC
Confidence            99999999995

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho

>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1

Probab=99.92  E-value=1e-24  Score=177.86  Aligned_cols=91  Identities=23%  Similarity=0.361  Sum_probs=71.1

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCC-----CCcccc
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD-----QNYIVS   75 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~-----~~~~~~   75 (252)
                      ||+|||++||+||||||+||+++.++                           .++++|||++......     .....+
T Consensus       136 al~~lH~~~i~H~dlkp~nili~~~~---------------------------~~kl~dfg~~~~~~~~~~~~~~~~~~~  188 (283)
T cd05090         136 GMEYLSSHFFVHKDLAARNILIGEQL---------------------------HVKISDLGLSREIYSADYYRVQPKSLL  188 (283)
T ss_pred             HHHHHHhcCeehhccccceEEEcCCC---------------------------cEEeccccccccccCCcceecccCCCc
Confidence            68999999999999999999995443                           4566666666543221     112234


Q ss_pred             CCCcccchhhhcCCCCccchhHhHHHHHHHHHh-CCCCCCCCCh
Q 025467           76 TRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHEN  118 (252)
Q Consensus        76 t~~y~aPE~l~~~~~~~~~Diws~G~~l~~l~~-g~~pf~~~~~  118 (252)
                      +..|+|||.+.+..++.++|+||+||++|++++ |..||.+...
T Consensus       189 ~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~g~~p~~~~~~  232 (283)
T cd05090         189 PIRWMPPEAIMYGKFSSDSDIWSFGVVLWEIFSFGLQPYYGFSN  232 (283)
T ss_pred             cceecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCH
Confidence            567999999988889999999999999999998 8899876543

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors

Probab=99.92  E-value=7.3e-25  Score=179.57  Aligned_cols=91  Identities=25%  Similarity=0.365  Sum_probs=69.6

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCC-----Ccccc
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ-----NYIVS   75 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~-----~~~~~   75 (252)
                      ||+|||+.||+||||||+||+++.++                           .++++|||.+.......     ....+
T Consensus       144 al~~LH~~~ivH~dlkp~Nil~~~~~---------------------------~~kL~Dfg~~~~~~~~~~~~~~~~~~~  196 (293)
T cd05053         144 GMEFLASKKCIHRDLAARNVLVTEDH---------------------------VMKIADFGLARDIHHIDYYRKTTNGRL  196 (293)
T ss_pred             HHHHHHHCCccccccceeeEEEcCCC---------------------------eEEeCccccccccccccceeccCCCCC
Confidence            68999999999999999999996544                           45566666554322211     11123


Q ss_pred             CCCcccchhhhcCCCCccchhHhHHHHHHHHHh-CCCCCCCCCh
Q 025467           76 TRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHEN  118 (252)
Q Consensus        76 t~~y~aPE~l~~~~~~~~~Diws~G~~l~~l~~-g~~pf~~~~~  118 (252)
                      +..|+|||++.+..++.++||||+||++|++++ |..||.+...
T Consensus       197 ~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~  240 (293)
T cd05053         197 PVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPV  240 (293)
T ss_pred             CccccCHHHhccCCcCcccceeehhhHHHHHhcCCCCCCCCCCH
Confidence            567999999988889999999999999999997 8899876543

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,

>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes

Probab=99.92  E-value=1.4e-24  Score=174.96  Aligned_cols=93  Identities=29%  Similarity=0.425  Sum_probs=72.2

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCC----CccccC
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ----NYIVST   76 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~----~~~~~t   76 (252)
                      ||+|||+.||+|+||||+||+++.+                           ..++|+|||.+.......    ....++
T Consensus       114 al~~lH~~~i~H~dl~~~Nill~~~---------------------------~~~~l~dfg~~~~~~~~~~~~~~~~~~~  166 (260)
T cd05069         114 GMAYIERMNYIHRDLRAANILVGDN---------------------------LVCKIADFGLARLIEDNEYTARQGAKFP  166 (260)
T ss_pred             HHHHHHhCCEeecccCcceEEEcCC---------------------------CeEEECCCccceEccCCcccccCCCccc
Confidence            6899999999999999999999543                           446666776664332211    112345


Q ss_pred             CCcccchhhhcCCCCccchhHhHHHHHHHHHh-CCCCCCCCChHH
Q 025467           77 RHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHENLE  120 (252)
Q Consensus        77 ~~y~aPE~l~~~~~~~~~Diws~G~~l~~l~~-g~~pf~~~~~~~  120 (252)
                      ..|+|||.+.+..++.++|+||+||++|++++ |..||.+....+
T Consensus       167 ~~y~~Pe~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~  211 (260)
T cd05069         167 IKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMVNRE  211 (260)
T ss_pred             hhhCCHHHhccCCcChHHHHHHHHHHHHHHHhCCCCCCCCCCHHH
Confidence            67999999988888999999999999999999 899998755443

Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an

>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome

Probab=99.92  E-value=1.2e-24  Score=175.00  Aligned_cols=92  Identities=26%  Similarity=0.441  Sum_probs=70.4

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCC----CccccC
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ----NYIVST   76 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~----~~~~~t   76 (252)
                      ||+|||+.|++|+||||+||+++.++                           .++++|||.+.......    ....++
T Consensus       112 ~l~~lH~~~i~H~dl~p~nili~~~~---------------------------~~kl~d~g~~~~~~~~~~~~~~~~~~~  164 (256)
T cd05113         112 GMAYLESKQFIHRDLAARNCLVDDQG---------------------------CVKVSDFGLSRYVLDDEYTSSVGSKFP  164 (256)
T ss_pred             HHHHHHhCCeeccccCcceEEEcCCC---------------------------CEEECCCccceecCCCceeecCCCccC
Confidence            68999999999999999999995544                           45666666554322211    011345


Q ss_pred             CCcccchhhhcCCCCccchhHhHHHHHHHHHh-CCCCCCCCChH
Q 025467           77 RHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHENL  119 (252)
Q Consensus        77 ~~y~aPE~l~~~~~~~~~Diws~G~~l~~l~~-g~~pf~~~~~~  119 (252)
                      ..|++||.+.+..++.++|+||+||++|++++ |..||......
T Consensus       165 ~~y~~pe~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~  208 (256)
T cd05113         165 VRWSPPEVLLYSKFSSKSDVWAFGVLMWEVYSLGKMPYERFNNS  208 (256)
T ss_pred             hhhCCHHHHhcCcccchhHHHHHHHHHHHHhcCCCCCcCcCCHH
Confidence            67999999988888999999999999999998 99998765543

Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds

>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A

Probab=99.91  E-value=1e-24  Score=177.69  Aligned_cols=93  Identities=28%  Similarity=0.403  Sum_probs=71.0

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCC-----Ccccc
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ-----NYIVS   75 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~-----~~~~~   75 (252)
                      ||+|||+.||+||||||+|||++.++                           .++|+|||.+.......     ....+
T Consensus       134 al~~LH~~~i~H~dlkp~nil~~~~~---------------------------~~kL~dfg~~~~~~~~~~~~~~~~~~~  186 (280)
T cd05092         134 GMVYLASLHFVHRDLATRNCLVGQGL---------------------------VVKIGDFGMSRDIYSTDYYRVGGRTML  186 (280)
T ss_pred             HHHHHHHCCeecccccHhhEEEcCCC---------------------------CEEECCCCceeEcCCCceeecCCCccc
Confidence            68999999999999999999995544                           45566666554322111     11234


Q ss_pred             CCCcccchhhhcCCCCccchhHhHHHHHHHHHh-CCCCCCCCChHH
Q 025467           76 TRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHENLE  120 (252)
Q Consensus        76 t~~y~aPE~l~~~~~~~~~Diws~G~~l~~l~~-g~~pf~~~~~~~  120 (252)
                      ++.|+|||.+.+..++.++|||||||++|++++ |..||......+
T Consensus       187 ~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~  232 (280)
T cd05092         187 PIRWMPPESILYRKFTTESDIWSFGVVLWEIFTYGKQPWYQLSNTE  232 (280)
T ss_pred             cccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCccCCHHH
Confidence            677999999998889999999999999999998 899987654433

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory

>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors

Probab=99.91  E-value=1.4e-24  Score=178.02  Aligned_cols=94  Identities=24%  Similarity=0.314  Sum_probs=70.5

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCC-----CCcccc
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD-----QNYIVS   75 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~-----~~~~~~   75 (252)
                      ||+|||++||+||||||+||+++.++.                           ++++|||.+......     .....+
T Consensus       142 al~~LH~~~i~H~dlkp~Nili~~~~~---------------------------~~l~dfg~~~~~~~~~~~~~~~~~~~  194 (296)
T cd05051         142 GMRYLESLNFVHRDLATRNCLVGKNYT---------------------------IKIADFGMSRNLYSSDYYRVQGRAPL  194 (296)
T ss_pred             HHHHHHHcCccccccchhceeecCCCc---------------------------eEEccccceeecccCcceeecCcCCC
Confidence            689999999999999999999965544                           455555554432111     112245


Q ss_pred             CCCcccchhhhcCCCCccchhHhHHHHHHHHHh--CCCCCCCCChHHH
Q 025467           76 TRHYRAPEVILGLGWTYPCDIWSVGCILVELCT--GEALFQTHENLEH  121 (252)
Q Consensus        76 t~~y~aPE~l~~~~~~~~~Diws~G~~l~~l~~--g~~pf~~~~~~~~  121 (252)
                      +..|+|||.+.+..++.++||||+||++|++++  +..||......+.
T Consensus       195 ~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~~~p~~~~~~~~~  242 (296)
T cd05051         195 PIRWMAWESVLLGKFTTKSDVWAFGVTLWEILTLCREQPYEHLTDQQV  242 (296)
T ss_pred             CceecCHHHhhcCCCCccchhhhhHHHHHHHHhcCCCCCCCCcChHHH
Confidence            678999999988889999999999999999998  6778865554433

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke

>KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms]

Probab=99.91  E-value=7.1e-26  Score=174.28  Aligned_cols=149  Identities=26%  Similarity=0.440  Sum_probs=113.2

Q ss_pred             Chhhhhc-cCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCC--CCccccCC
Q 025467            1 MFAVMHD-LCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD--QNYIVSTR   77 (252)
Q Consensus         1 aL~~lH~-~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~--~~~~~~t~   77 (252)
                      ||.||-. ..|+|||+||+|||+                           +..+.+||||||.+-.....  .+.-.|..
T Consensus       179 AL~yLK~~lkiIHRDvKPSNILl---------------------------dr~G~vKLCDFGIcGqLv~SiAkT~daGCr  231 (361)
T KOG1006|consen  179 ALDYLKEELKIIHRDVKPSNILL---------------------------DRHGDVKLCDFGICGQLVDSIAKTVDAGCR  231 (361)
T ss_pred             HHHHHHHHhhhhhccCChhheEE---------------------------ecCCCEeeecccchHhHHHHHHhhhccCCc
Confidence            6888886 679999999999999                           56667888888876543222  22346888


Q ss_pred             CcccchhhhcC--CCCccchhHhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHh-CCCchHHHHHhhHHHHHHhhcCCCC
Q 025467           78 HYRAPEVILGL--GWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVL-GPLPQHMLKRVDRHAEKYVRRGRLD  154 (252)
Q Consensus        78 ~y~aPE~l~~~--~~~~~~Diws~G~~l~~l~~g~~pf~~~~~~~~~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~  154 (252)
                      +|||||.+...  +|..++|+||+|++|+|+.||..|+.+++.  ++.++..+. |.+|. +                 .
T Consensus       232 pYmAPERi~p~~~gyDiRSDvWSLGITL~EvAtG~fPyr~w~s--vfeql~~Vv~gdpp~-l-----------------~  291 (361)
T KOG1006|consen  232 PYMAPERIDPSDKGYDIRSDVWSLGITLYEVATGNFPYRKWDS--VFEQLCQVVIGDPPI-L-----------------L  291 (361)
T ss_pred             cccChhccCCccCCcchhhhhhhhcceEeeeecCCCCcchHHH--HHHHHHHHHcCCCCe-e-----------------c
Confidence            99999999743  589999999999999999999999988765  555554443 33331 0                 0


Q ss_pred             CCccccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCCCC
Q 025467          155 WPEGAASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRL  234 (252)
Q Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~  234 (252)
                      .+                                                    ......+..+..++.-||..|-+.||
T Consensus       292 ~~----------------------------------------------------~~~~~~s~~~~~fintCl~Kd~~~Rp  319 (361)
T KOG1006|consen  292 FD----------------------------------------------------KECVHYSFSMVRFINTCLIKDRSDRP  319 (361)
T ss_pred             Cc----------------------------------------------------ccccccCHHHHHHHHHHhhcccccCc
Confidence            00                                                    00123456889999999999999999


Q ss_pred             CHHHHHcCCCCCCc
Q 025467          235 TAREALRHPFFTRD  248 (252)
Q Consensus       235 ta~e~l~hpwf~~~  248 (252)
                      ...+++++||+.+-
T Consensus       320 ky~~Lk~~~fyr~y  333 (361)
T KOG1006|consen  320 KYDDLKKFPFYRMY  333 (361)
T ss_pred             chhhhhcCchhhhh
Confidence            99999999998764

>KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms]

Probab=99.91  E-value=6e-25  Score=192.77  Aligned_cols=135  Identities=34%  Similarity=0.540  Sum_probs=101.2

Q ss_pred             ChhhhhccC--ccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCC-C------
Q 025467            1 MFAVMHDLC--MIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ-N------   71 (252)
Q Consensus         1 aL~~lH~~~--ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~-~------   71 (252)
                      |+++||...  |||||||-+|||++.++                           .+||||||.+....... .      
T Consensus       156 AVa~mH~~~pPiIHRDLKiENvLls~~g---------------------------~~KLCDFGSatt~~~~~~~~~e~~~  208 (738)
T KOG1989|consen  156 AVAAMHYLKPPIIHRDLKIENVLLSADG---------------------------NYKLCDFGSATTKILSPTSAQEVNY  208 (738)
T ss_pred             HHHHHhcCCCccchhhhhhhheEEcCCC---------------------------CEEeCcccccccccCCCccHHHHHH
Confidence            688999988  99999999999996544                           56677777664322211 1      


Q ss_pred             -----ccccCCCcccchhhh---cCCCCccchhHhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHH
Q 025467           72 -----YIVSTRHYRAPEVIL---GLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRH  143 (252)
Q Consensus        72 -----~~~~t~~y~aPE~l~---~~~~~~~~Diws~G~~l~~l~~g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~  143 (252)
                           ....|+.|+|||++-   +.+.+.++|||+|||+||.|+....||......                        
T Consensus       209 ve~eI~k~TTp~YRsPEMIDlysg~pI~eKsDIWALGclLYkLCy~t~PFe~sg~l------------------------  264 (738)
T KOG1989|consen  209 VEEEIEKYTTPQYRSPEMIDLYSGLPIGEKSDIWALGCLLYKLCYFTTPFEESGKL------------------------  264 (738)
T ss_pred             HHHHHHhhCCccccChHHHhhhcCCCCcchhHHHHHHHHHHHHHHhCCCcCcCcce------------------------
Confidence                 135789999999985   457899999999999999999999999754321                        


Q ss_pred             HHHHhhcCCCCCCccccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHH
Q 025467          144 AEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQ  223 (252)
Q Consensus       144 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~  223 (252)
                         .+..+.+.+|..                                                     +.-+..+.+||+
T Consensus       265 ---aIlng~Y~~P~~-----------------------------------------------------p~ys~~l~~LI~  288 (738)
T KOG1989|consen  265 ---AILNGNYSFPPF-----------------------------------------------------PNYSDRLKDLIR  288 (738)
T ss_pred             ---eEEeccccCCCC-----------------------------------------------------ccHHHHHHHHHH
Confidence               112233333321                                                     234568999999


Q ss_pred             HhccCCCCCCCCHHHHHcC
Q 025467          224 GLLRYDPTDRLTAREALRH  242 (252)
Q Consensus       224 ~~L~~dP~~R~ta~e~l~h  242 (252)
                      .||+.||++||++.|++.+
T Consensus       289 ~mL~~nP~~RPnI~Qv~~~  307 (738)
T KOG1989|consen  289 TMLQPNPDERPNIYQVLEE  307 (738)
T ss_pred             HHhccCcccCCCHHHHHHH
Confidence            9999999999999999864

>KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms]

Probab=99.91  E-value=1.7e-25  Score=194.80  Aligned_cols=151  Identities=28%  Similarity=0.400  Sum_probs=110.0

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCCC------ccc
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQN------YIV   74 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~~------~~~   74 (252)
                      ||++||+.+||||||||.|||++..+.                      +....++|.|||+++.......      ...
T Consensus       618 GlaHLHsl~iVHRDLkPQNILI~~~~~----------------------~~~~ra~iSDfglsKkl~~~~sS~~r~s~~s  675 (903)
T KOG1027|consen  618 GLAHLHSLKIVHRDLKPQNILISVPSA----------------------DGTLRAKISDFGLSKKLAGGKSSFSRLSGGS  675 (903)
T ss_pred             HHHHHHhcccccccCCCceEEEEccCC----------------------CcceeEEecccccccccCCCcchhhcccCCC
Confidence            689999999999999999999976421                      3456678888888876544332      247


Q ss_pred             cCCCcccchhhhcCCCCccchhHhHHHHHHHHHhC-CCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHHHHHHhhcCCC
Q 025467           75 STRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG-EALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRL  153 (252)
Q Consensus        75 ~t~~y~aPE~l~~~~~~~~~Diws~G~~l~~l~~g-~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~  153 (252)
                      ||-.|+|||.+....-..++||+|+||++|+.++| ..||...  .+....|..  |.                     .
T Consensus       676 Gt~GW~APE~L~~~~~~~avDiFslGCvfyYvltgG~HpFGd~--~~R~~NIl~--~~---------------------~  730 (903)
T KOG1027|consen  676 GTSGWQAPEQLREDRKTQAVDIFSLGCVFYYVLTGGSHPFGDS--LERQANILT--GN---------------------Y  730 (903)
T ss_pred             CcccccCHHHHhccccCcccchhhcCceEEEEecCCccCCCch--HHhhhhhhc--Cc---------------------c
Confidence            89999999999988778899999999999999885 7999532  222111111  00                     0


Q ss_pred             CCCccccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCCC
Q 025467          154 DWPEGAASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDR  233 (252)
Q Consensus       154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R  233 (252)
                      .             +..+                                       ......++.|||.+||..+|..|
T Consensus       731 ~-------------L~~L---------------------------------------~~~~d~eA~dLI~~ml~~dP~~R  758 (903)
T KOG1027|consen  731 T-------------LVHL---------------------------------------EPLPDCEAKDLISRMLNPDPQLR  758 (903)
T ss_pred             c-------------eeee---------------------------------------ccCchHHHHHHHHHhcCCCcccC
Confidence            0             0000                                       00111188999999999999999


Q ss_pred             CCHHHHHcCCCCCCccc
Q 025467          234 LTAREALRHPFFTRDHL  250 (252)
Q Consensus       234 ~ta~e~l~hpwf~~~~~  250 (252)
                      |||.++|.||+|=...+
T Consensus       759 Psa~~VL~HPlFW~~ek  775 (903)
T KOG1027|consen  759 PSATDVLNHPLFWDSEK  775 (903)
T ss_pred             CCHHHHhCCCccCChHH
Confidence            99999999999965543

>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase

Probab=99.91  E-value=1.5e-24  Score=174.09  Aligned_cols=91  Identities=23%  Similarity=0.376  Sum_probs=71.4

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCCCccccCCCcc
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYR   80 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~~~~~~t~~y~   80 (252)
                      ||+|||+.|++||||||+||+++.+                           +.++|+|||.+............+..|+
T Consensus       112 al~~lH~~~~~H~dl~p~nili~~~---------------------------~~~kl~Dfg~~~~~~~~~~~~~~~~~y~  164 (254)
T cd05083         112 GMEYLESKKLVHRDLAARNILVSED---------------------------GVAKVSDFGLARVGSMGVDNSKLPVKWT  164 (254)
T ss_pred             HHHHHHhCCeeccccCcceEEEcCC---------------------------CcEEECCCccceeccccCCCCCCCceec
Confidence            6899999999999999999999543                           3466777776654332222223456799


Q ss_pred             cchhhhcCCCCccchhHhHHHHHHHHHh-CCCCCCCCCh
Q 025467           81 APEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHEN  118 (252)
Q Consensus        81 aPE~l~~~~~~~~~Diws~G~~l~~l~~-g~~pf~~~~~  118 (252)
                      |||.+.+..++.++|+||+||++|++++ |..||...+.
T Consensus       165 ~pe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~  203 (254)
T cd05083         165 APEALKHKKFSSKSDVWSYGVLLWEVFSYGRAPYPKMSL  203 (254)
T ss_pred             CHHHhccCCcCchhhHHHHHHHHHHHHhCCCCCCccCCH
Confidence            9999988889999999999999999997 9999976543

Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki

>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3

Probab=99.91  E-value=2e-24  Score=175.91  Aligned_cols=90  Identities=26%  Similarity=0.403  Sum_probs=71.0

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCC-----Ccccc
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ-----NYIVS   75 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~-----~~~~~   75 (252)
                      ||+|||++|++||||||+||+++.++                           .++++|||.++......     ....+
T Consensus       121 ~l~~lH~~~iiH~dlkp~nili~~~~---------------------------~~kl~Dfg~~~~~~~~~~~~~~~~~~~  173 (279)
T cd05111         121 GMYYLEEHRMVHRNLAARNILLKSDS---------------------------IVQIADFGVADLLYPDDKKYFYSEHKT  173 (279)
T ss_pred             HHHHHHHCCEeccccCcceEEEcCCC---------------------------cEEEcCCccceeccCCCcccccCCCCC
Confidence            68999999999999999999995443                           45666666664332211     12245


Q ss_pred             CCCcccchhhhcCCCCccchhHhHHHHHHHHHh-CCCCCCCCC
Q 025467           76 TRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHE  117 (252)
Q Consensus        76 t~~y~aPE~l~~~~~~~~~Diws~G~~l~~l~~-g~~pf~~~~  117 (252)
                      +..|++||.+.+..++.++|||||||++|++++ |..||.+..
T Consensus       174 ~~~y~~pE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~  216 (279)
T cd05111         174 PIKWMALESILFGRYTHQSDVWSYGVTVWEMMSYGAEPYAGMR  216 (279)
T ss_pred             cccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCCCCC
Confidence            678999999988889999999999999999998 999997654

Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r

>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2

Probab=99.91  E-value=8.4e-25  Score=180.25  Aligned_cols=91  Identities=22%  Similarity=0.265  Sum_probs=69.7

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCC--CccccCCC
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ--NYIVSTRH   78 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~--~~~~~t~~   78 (252)
                      ||+|||++||+||||||+|||++.++                           .++|+|||++.......  ....++..
T Consensus       136 al~~LH~~gi~H~dlkp~Nili~~~~---------------------------~~kl~dfg~~~~~~~~~~~~~~~~~~~  188 (303)
T cd05088         136 GMDYLSQKQFIHRDLAARNILVGENY---------------------------VAKIADFGLSRGQEVYVKKTMGRLPVR  188 (303)
T ss_pred             HHHHHHhCCccccccchheEEecCCC---------------------------cEEeCccccCcccchhhhcccCCCccc
Confidence            68999999999999999999995443                           45666666654221111  11123557


Q ss_pred             cccchhhhcCCCCccchhHhHHHHHHHHHh-CCCCCCCCCh
Q 025467           79 YRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHEN  118 (252)
Q Consensus        79 y~aPE~l~~~~~~~~~Diws~G~~l~~l~~-g~~pf~~~~~  118 (252)
                      |+|||.+.+..++.++||||+||+++++++ |..||.+.+.
T Consensus       189 y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~  229 (303)
T cd05088         189 WMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTC  229 (303)
T ss_pred             ccCHHHHhccCCcccccchhhhhHHHHHHhcCCCCcccCCh
Confidence            999999988888999999999999999998 9999975543

Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A

>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases

Probab=99.91  E-value=1.7e-24  Score=174.08  Aligned_cols=92  Identities=27%  Similarity=0.375  Sum_probs=70.3

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCCCc------cc
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNY------IV   74 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~~~------~~   74 (252)
                      ||+|||+.+++|+||||+||+++.++.                           ++|+|||.+.........      ..
T Consensus       107 ~l~~lh~~~i~H~di~p~nili~~~~~---------------------------~kl~df~~~~~~~~~~~~~~~~~~~~  159 (257)
T cd05060         107 GMAYLESKHFVHRDLAARNVLLVNRHQ---------------------------AKISDFGMSRALGAGSDYYRATTAGR  159 (257)
T ss_pred             HHHHHhhcCeeccCcccceEEEcCCCc---------------------------EEeccccccceeecCCcccccccCcc
Confidence            589999999999999999999965444                           555666555433222111      12


Q ss_pred             cCCCcccchhhhcCCCCccchhHhHHHHHHHHHh-CCCCCCCCChH
Q 025467           75 STRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHENL  119 (252)
Q Consensus        75 ~t~~y~aPE~l~~~~~~~~~Diws~G~~l~~l~~-g~~pf~~~~~~  119 (252)
                      ++..|+|||.+.+..++.++||||+||++|++++ |..||...+..
T Consensus       160 ~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~~~~~g~~p~~~~~~~  205 (257)
T cd05060         160 WPLKWYAPECINYGKFSSKSDVWSYGVTLWEAFSYGAKPYGEMKGA  205 (257)
T ss_pred             ccccccCHHHhcCCCCCccchHHHHHHHHHHHHcCCCCCcccCCHH
Confidence            3457999999988889999999999999999998 99999765543

Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi

>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors

Probab=99.91  E-value=1.9e-24  Score=178.10  Aligned_cols=91  Identities=30%  Similarity=0.450  Sum_probs=70.0

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCCC-----cccc
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQN-----YIVS   75 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~~-----~~~~   75 (252)
                      ||+|||+++|+|+||||+|||++.++                           .++++|||.+........     ...+
T Consensus       153 ~l~~lH~~~ivH~dlkp~Nil~~~~~---------------------------~~~l~dfg~~~~~~~~~~~~~~~~~~~  205 (302)
T cd05055         153 GMAFLASKNCIHRDLAARNVLLTHGK---------------------------IVKICDFGLARDIMNDSNYVVKGNARL  205 (302)
T ss_pred             HHHHHHHCCeehhhhccceEEEcCCC---------------------------eEEECCCcccccccCCCceeecCCCCc
Confidence            58999999999999999999995544                           455556665543221111     1234


Q ss_pred             CCCcccchhhhcCCCCccchhHhHHHHHHHHHh-CCCCCCCCCh
Q 025467           76 TRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHEN  118 (252)
Q Consensus        76 t~~y~aPE~l~~~~~~~~~Diws~G~~l~~l~~-g~~pf~~~~~  118 (252)
                      +..|+|||.+.+..++.++||||+||++|++++ |..||.....
T Consensus       206 ~~~y~aPE~~~~~~~~~~~DiwslGvil~el~t~g~~p~~~~~~  249 (302)
T cd05055         206 PVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSNPYPGMPV  249 (302)
T ss_pred             ccccCCHhhhccCCCCcHhHHHHHHHHHHHHHhCCCCCcCCCCc
Confidence            667999999988889999999999999999998 9999876543

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept

>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase

Probab=99.91  E-value=2.9e-24  Score=172.64  Aligned_cols=94  Identities=24%  Similarity=0.370  Sum_probs=72.1

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCC------CCccc
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD------QNYIV   74 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~------~~~~~   74 (252)
                      ||+|||+.|++|+||+|+||+++.++.                           ++++|||.+......      .....
T Consensus       109 ~L~~lH~~~i~H~di~p~nil~~~~~~---------------------------~kl~dfg~~~~~~~~~~~~~~~~~~~  161 (257)
T cd05040         109 GMRYLESKRFIHRDLAARNILLASDDK---------------------------VKIGDFGLMRALPQNEDHYVMEEHLK  161 (257)
T ss_pred             HHHHHHhCCccccccCcccEEEecCCE---------------------------EEeccccccccccccccceecccCCC
Confidence            689999999999999999999965544                           555555554432221      11224


Q ss_pred             cCCCcccchhhhcCCCCccchhHhHHHHHHHHHh-CCCCCCCCChHHH
Q 025467           75 STRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHENLEH  121 (252)
Q Consensus        75 ~t~~y~aPE~l~~~~~~~~~Diws~G~~l~~l~~-g~~pf~~~~~~~~  121 (252)
                      ++..|+|||.+.+..++.++||||+||++++|++ |..||......+.
T Consensus       162 ~~~~y~~pE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~  209 (257)
T cd05040         162 VPFAWCAPESLRTRTFSHASDVWMFGVTLWEMFTYGEEPWAGLSGSQI  209 (257)
T ss_pred             CCceecCHHHhcccCcCchhhhHHHHHHHHHHHhCCCCCCCCCCHHHH
Confidence            5678999999988889999999999999999998 9999976554443

Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and

>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein

Probab=99.91  E-value=1.7e-24  Score=177.21  Aligned_cols=90  Identities=23%  Similarity=0.382  Sum_probs=69.7

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCC-----Ccccc
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ-----NYIVS   75 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~-----~~~~~   75 (252)
                      ||+|||+.+|+||||||+||++..++                           .++|+|||.+.......     ....+
T Consensus       139 ~l~~LH~~~ivH~dikp~nill~~~~---------------------------~~kl~dfg~~~~~~~~~~~~~~~~~~~  191 (290)
T cd05045         139 GMQYLAEMKLVHRDLAARNVLVAEGR---------------------------KMKISDFGLSRDVYEEDSYVKRSKGRI  191 (290)
T ss_pred             HHHHHHHCCeehhhhhhheEEEcCCC---------------------------cEEeccccccccccCccchhcccCCCC
Confidence            68999999999999999999995544                           45666666554321111     11234


Q ss_pred             CCCcccchhhhcCCCCccchhHhHHHHHHHHHh-CCCCCCCCC
Q 025467           76 TRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHE  117 (252)
Q Consensus        76 t~~y~aPE~l~~~~~~~~~Diws~G~~l~~l~~-g~~pf~~~~  117 (252)
                      +..|+|||.+.+..++.++||||+||++++|++ |..||.+..
T Consensus       192 ~~~y~apE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~  234 (290)
T cd05045         192 PVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIA  234 (290)
T ss_pred             CccccCHHHHccCCcchHhHHHHHHHHHHHHHhcCCCCCCCCC
Confidence            567999999988888999999999999999998 999997654

Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi

>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases

Probab=99.91  E-value=1.8e-24  Score=173.98  Aligned_cols=92  Identities=26%  Similarity=0.422  Sum_probs=70.1

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCCCc----cccC
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNY----IVST   76 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~~~----~~~t   76 (252)
                      ||+|||+.||+||||||+||+++.++                           .++++|||.++........    ..++
T Consensus       112 ~l~~lH~~~i~H~dl~p~ni~i~~~~---------------------------~~kl~dfg~~~~~~~~~~~~~~~~~~~  164 (256)
T cd05059         112 AMEYLESNGFIHRDLAARNCLVGEDN---------------------------VVKVSDFGLARYVLDDQYTSSQGTKFP  164 (256)
T ss_pred             HHHHHHHCCcccccccHhhEEECCCC---------------------------cEEECCcccceecccccccccCCCCCC
Confidence            58999999999999999999995544                           4566666655433221111    1223


Q ss_pred             CCcccchhhhcCCCCccchhHhHHHHHHHHHh-CCCCCCCCChH
Q 025467           77 RHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHENL  119 (252)
Q Consensus        77 ~~y~aPE~l~~~~~~~~~Diws~G~~l~~l~~-g~~pf~~~~~~  119 (252)
                      ..|+|||.+.+..++.++|+||+||++|++++ |..||...+..
T Consensus       165 ~~y~~Pe~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~  208 (256)
T cd05059         165 VKWAPPEVFDYSRFSSKSDVWSFGVLMWEVFSEGKMPYERFSNS  208 (256)
T ss_pred             ccccCHHHhccCCCCchhhHHHHHHHHHHHhccCCCCCCCCCHH
Confidence            46999999998889999999999999999998 78999765543

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows

>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases

Probab=99.91  E-value=2.3e-24  Score=173.19  Aligned_cols=90  Identities=24%  Similarity=0.392  Sum_probs=71.5

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCCCccccCCCcc
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYR   80 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~~~~~~t~~y~   80 (252)
                      ||.|||++|++|+||||+||+++.+                           +.++|+|||.+............+..|+
T Consensus       114 ~l~~lh~~~i~H~di~p~Nili~~~---------------------------~~~~l~d~g~~~~~~~~~~~~~~~~~~~  166 (256)
T cd05039         114 GMEYLEEKNFVHRDLAARNVLVSED---------------------------LVAKVSDFGLAKEASQGQDSGKLPVKWT  166 (256)
T ss_pred             HHHHHHhCCccchhcccceEEEeCC---------------------------CCEEEcccccccccccccccCCCccccc
Confidence            6899999999999999999999543                           4567777776665433222223456799


Q ss_pred             cchhhhcCCCCccchhHhHHHHHHHHHh-CCCCCCCCC
Q 025467           81 APEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHE  117 (252)
Q Consensus        81 aPE~l~~~~~~~~~Diws~G~~l~~l~~-g~~pf~~~~  117 (252)
                      |||.+....++.++|+||+||+++++++ |..||....
T Consensus       167 ape~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~  204 (256)
T cd05039         167 APEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIP  204 (256)
T ss_pred             CchhhcCCcCCcHHHHHHHHHHHHHHHhcCCCCCCCCC
Confidence            9999988888899999999999999997 999987554

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk

>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk

Probab=99.91  E-value=2.1e-24  Score=173.89  Aligned_cols=94  Identities=28%  Similarity=0.402  Sum_probs=72.7

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCC----CccccC
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ----NYIVST   76 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~----~~~~~t   76 (252)
                      ||+|||+.|++||||||+||+++.+                           ..++++|||.+.......    ....++
T Consensus       114 al~~LH~~~i~H~dl~p~ni~i~~~---------------------------~~~~l~dfg~~~~~~~~~~~~~~~~~~~  166 (260)
T cd05067         114 GMAFIERKNYIHRDLRAANILVSET---------------------------LCCKIADFGLARLIEDNEYTAREGAKFP  166 (260)
T ss_pred             HHHHHhcCCeecccccHHhEEEcCC---------------------------CCEEEccCcceeecCCCCcccccCCccc
Confidence            6899999999999999999999544                           446666666654432111    112345


Q ss_pred             CCcccchhhhcCCCCccchhHhHHHHHHHHHh-CCCCCCCCChHHH
Q 025467           77 RHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHENLEH  121 (252)
Q Consensus        77 ~~y~aPE~l~~~~~~~~~Diws~G~~l~~l~~-g~~pf~~~~~~~~  121 (252)
                      ..|+|||++.+..++.++|+||+||+++++++ |..||.+.+..+.
T Consensus       167 ~~y~~pe~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~  212 (260)
T cd05067         167 IKWTAPEAINYGTFTIKSDVWSFGILLTEIVTYGRIPYPGMTNPEV  212 (260)
T ss_pred             ccccCHHHhccCCcCcccchHHHHHHHHHHHhCCCCCCCCCChHHH
Confidence            67999999988888999999999999999998 9999986654433

Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr

>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1

Probab=99.91  E-value=1.4e-24  Score=177.69  Aligned_cols=148  Identities=30%  Similarity=0.464  Sum_probs=104.0

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCC----CccccC
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ----NYIVST   76 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~----~~~~~t   76 (252)
                      ||+|||+.|++||||+|+|||++.+                           +.++|+|||.+.......    ....++
T Consensus       117 al~~lH~~~i~H~dl~p~nil~~~~---------------------------~~~kl~dfg~~~~~~~~~~~~~~~~~~~  169 (290)
T cd05613         117 ALEHLHKLGIIYRDIKLENILLDSN---------------------------GHVVLTDFGLSKEFHEDEVERAYSFCGT  169 (290)
T ss_pred             HHHHHHhCCeeccCCCHHHeEECCC---------------------------CCEEEeeCccceecccccccccccccCC
Confidence            6899999999999999999999544                           456677777664432211    123578


Q ss_pred             CCcccchhhhcC--CCCccchhHhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHHHHHHhhcCCCC
Q 025467           77 RHYRAPEVILGL--GWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLD  154 (252)
Q Consensus        77 ~~y~aPE~l~~~--~~~~~~Diws~G~~l~~l~~g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~  154 (252)
                      ..|+|||.+...  .++.++|+||+||++|++++|..||...........+....                   ......
T Consensus       170 ~~y~aPE~~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~-------------------~~~~~~  230 (290)
T cd05613         170 IEYMAPDIVRGGDGGHDKAVDWWSMGVLMYELLTGASPFTVDGEKNSQAEISRRI-------------------LKSEPP  230 (290)
T ss_pred             cccCChhhccCCCCCCCccccHHHHHHHHHHHhcCCCCCCcCCccccHHHHHHHh-------------------hccCCC
Confidence            889999998753  46788999999999999999999986432211111111100                   000000


Q ss_pred             CCccccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCCCC
Q 025467          155 WPEGAASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRL  234 (252)
Q Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~  234 (252)
                                                                             .....+..+.+++.+||+.||++|+
T Consensus       231 -------------------------------------------------------~~~~~~~~~~~ll~~~l~~~p~~R~  255 (290)
T cd05613         231 -------------------------------------------------------YPQEMSALAKDIIQRLLMKDPKKRL  255 (290)
T ss_pred             -------------------------------------------------------CCccCCHHHHHHHHHHhcCCHHHhc
Confidence                                                                   0122346789999999999999997


Q ss_pred             -----CHHHHHcCCCCCCcc
Q 025467          235 -----TAREALRHPFFTRDH  249 (252)
Q Consensus       235 -----ta~e~l~hpwf~~~~  249 (252)
                           ++++++.||||....
T Consensus       256 ~~~~~~~~~l~~~~~~~~~~  275 (290)
T cd05613         256 GCGPSDADEIKKHPFFQKIN  275 (290)
T ss_pred             CCCCCCHHHHHcCcccccCC
Confidence                 899999999998753

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10

Probab=99.91  E-value=1.6e-24  Score=175.25  Aligned_cols=93  Identities=20%  Similarity=0.323  Sum_probs=69.8

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCC----CCccccC
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD----QNYIVST   76 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~----~~~~~~t   76 (252)
                      ||+|||++|++||||||+||+++.++.                           +++.|||.+......    .....++
T Consensus       119 al~~lH~~~iiH~dikp~nili~~~~~---------------------------~~l~dfg~~~~~~~~~~~~~~~~~~~  171 (266)
T cd05064         119 GMKYLSEMGYVHKGLAAHKVLVNSDLV---------------------------CKISGFRRLQEDKSEAIYTTMSGKSP  171 (266)
T ss_pred             HHHHHHHCCEeeccccHhhEEEcCCCc---------------------------EEECCCcccccccccchhcccCCCCc
Confidence            689999999999999999999955444                           455555543321111    0112345


Q ss_pred             CCcccchhhhcCCCCccchhHhHHHHHHHHHh-CCCCCCCCChHH
Q 025467           77 RHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHENLE  120 (252)
Q Consensus        77 ~~y~aPE~l~~~~~~~~~Diws~G~~l~~l~~-g~~pf~~~~~~~  120 (252)
                      ..|+|||++.+..++.++||||+||++|++++ |..||......+
T Consensus       172 ~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~p~~~~~~~~  216 (266)
T cd05064         172 VLWAAPEAIQYHHFSSASDVWSFGIVMWEVMSYGERPYWDMSGQD  216 (266)
T ss_pred             eeecCHHHHhhCCccchhHHHHHHHHHHHHhcCCCCCcCcCCHHH
Confidence            67999999998889999999999999999775 999997665443

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor

>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases

Probab=99.91  E-value=1.9e-24  Score=175.58  Aligned_cols=92  Identities=26%  Similarity=0.343  Sum_probs=71.4

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCC-----CCcccc
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD-----QNYIVS   75 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~-----~~~~~~   75 (252)
                      ||.|||+.+|+||||||+||+++.++                           .++|+|||.++.....     .....+
T Consensus       131 ~l~~lH~~~i~H~di~p~nill~~~~---------------------------~~kl~dfg~~~~~~~~~~~~~~~~~~~  183 (277)
T cd05032         131 GMAYLAAKKFVHRDLAARNCMVAEDL---------------------------TVKIGDFGMTRDIYETDYYRKGGKGLL  183 (277)
T ss_pred             HHHHHHhCCccccccChheEEEcCCC---------------------------CEEECCcccchhhccCcccccCCCCCc
Confidence            68999999999999999999995544                           4566666655432211     112245


Q ss_pred             CCCcccchhhhcCCCCccchhHhHHHHHHHHHh-CCCCCCCCChH
Q 025467           76 TRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHENL  119 (252)
Q Consensus        76 t~~y~aPE~l~~~~~~~~~Diws~G~~l~~l~~-g~~pf~~~~~~  119 (252)
                      +..|+|||.+....++.++||||+||++|++++ |..||.+.+..
T Consensus       184 ~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~  228 (277)
T cd05032         184 PVRWMAPESLKDGVFTTKSDVWSFGVVLWEMATLAEQPYQGLSNE  228 (277)
T ss_pred             cccccCHHHHhcCCCCcccchHHHHHHHHHhhccCCCCCccCCHH
Confidence            678999999988888999999999999999998 89999765543

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological

>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4

Probab=99.91  E-value=2.4e-24  Score=178.35  Aligned_cols=91  Identities=24%  Similarity=0.362  Sum_probs=70.3

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCC-----Ccccc
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ-----NYIVS   75 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~-----~~~~~   75 (252)
                      ||+|||++||+||||||+||+++.++                           .++|+|||.++......     ....+
T Consensus       146 aL~~lH~~gi~H~dlkp~Nill~~~~---------------------------~~kL~Dfg~~~~~~~~~~~~~~~~~~~  198 (314)
T cd05099         146 GMEYLESRRCIHRDLAARNVLVTEDN---------------------------VMKIADFGLARGVHDIDYYKKTSNGRL  198 (314)
T ss_pred             HHHHHHHCCeeeccccceeEEEcCCC---------------------------cEEEccccccccccccccccccccCCC
Confidence            68999999999999999999995544                           45666666665332211     11123


Q ss_pred             CCCcccchhhhcCCCCccchhHhHHHHHHHHHh-CCCCCCCCCh
Q 025467           76 TRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHEN  118 (252)
Q Consensus        76 t~~y~aPE~l~~~~~~~~~Diws~G~~l~~l~~-g~~pf~~~~~  118 (252)
                      +..|+|||.+.+..++.++|+||+||++|++++ |..||.+...
T Consensus       199 ~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~  242 (314)
T cd05099         199 PVKWMAPEALFDRVYTHQSDVWSFGILMWEIFTLGGSPYPGIPV  242 (314)
T ss_pred             CccccCHHHHccCCcCccchhhHHHHHHHHHHhCCCCCCCCCCH
Confidence            457999999988889999999999999999998 8899876544

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>smart00750 KIND kinase non-catalytic C-lobe domain

Probab=99.91  E-value=8.7e-25  Score=166.05  Aligned_cols=79  Identities=30%  Similarity=0.434  Sum_probs=63.3

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCCCccccCCCcc
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYR   80 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~~~~~~t~~y~   80 (252)
                      ||+|||+++      ||+|||++.++                           .+++  ||.+.......  ..|++.|+
T Consensus        29 ~L~~lH~~~------kp~Nil~~~~~---------------------------~~~~--fG~~~~~~~~~--~~g~~~y~   71 (176)
T smart00750       29 ALRELHRQA------KSGNILLTWDG---------------------------LLKL--DGSVAFKTPEQ--SRVDPYFM   71 (176)
T ss_pred             HHHHHHhcC------CcccEeEcCcc---------------------------ceee--ccceEeecccc--CCCccccc
Confidence            688999988      99999995443                           4454  66655433322  25789999


Q ss_pred             cchhhhcCCCCccchhHhHHHHHHHHHhCCCCCCCC
Q 025467           81 APEVILGLGWTYPCDIWSVGCILVELCTGEALFQTH  116 (252)
Q Consensus        81 aPE~l~~~~~~~~~Diws~G~~l~~l~~g~~pf~~~  116 (252)
                      |||++.+..++.++||||+||++|++++|..||...
T Consensus        72 aPE~~~~~~~~~~~DiwSlG~il~elltg~~p~~~~  107 (176)
T smart00750       72 APEVIQGQSYTEKADIYSLGITLYEALDYELPYNEE  107 (176)
T ss_pred             ChHHhcCCCCcchhhHHHHHHHHHHHHhCCCCcccc
Confidence            999999999999999999999999999999999654

It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features

>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src

Probab=99.91  E-value=2.6e-24  Score=173.65  Aligned_cols=92  Identities=28%  Similarity=0.398  Sum_probs=71.1

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCCC----ccccC
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQN----YIVST   76 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~~----~~~~t   76 (252)
                      ||+|||+.+|+||||||+||+++.++                           .++|+|||.+........    ...++
T Consensus       114 aL~~lH~~~i~H~dl~p~Nill~~~~---------------------------~~~L~dfg~~~~~~~~~~~~~~~~~~~  166 (262)
T cd05071         114 GMAYVERMNYVHRDLRAANILVGENL---------------------------VCKVADFGLARLIEDNEYTARQGAKFP  166 (262)
T ss_pred             HHHHHHHCCccccccCcccEEEcCCC---------------------------cEEeccCCceeeccccccccccCCccc
Confidence            68999999999999999999995544                           456666666543222111    12355


Q ss_pred             CCcccchhhhcCCCCccchhHhHHHHHHHHHh-CCCCCCCCChH
Q 025467           77 RHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHENL  119 (252)
Q Consensus        77 ~~y~aPE~l~~~~~~~~~Diws~G~~l~~l~~-g~~pf~~~~~~  119 (252)
                      ..|+|||+..+..++.++|+||+||++|++++ |..||.+....
T Consensus       167 ~~y~~PE~~~~~~~~~~~DvwslG~~l~ellt~g~~p~~~~~~~  210 (262)
T cd05071         167 IKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNR  210 (262)
T ss_pred             ceecCHhHhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCChH
Confidence            67999999988889999999999999999999 88898765543

Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo

>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase

Probab=99.91  E-value=2.1e-24  Score=176.42  Aligned_cols=88  Identities=34%  Similarity=0.497  Sum_probs=69.8

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCC----CccccC
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ----NYIVST   76 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~----~~~~~t   76 (252)
                      ||+|||+.|++||||+|.||++..                           ...++++|||.+.......    ....++
T Consensus       117 ~l~~lH~~~~~H~dl~p~nil~~~---------------------------~~~~~l~dfg~~~~~~~~~~~~~~~~~~~  169 (288)
T cd05583         117 ALDHLHQLGIIYRDIKLENILLDS---------------------------EGHVVLTDFGLSKEFLAEEEERAYSFCGT  169 (288)
T ss_pred             HHHHHHHCCeeccCCCHHHeEECC---------------------------CCCEEEEECccccccccccccccccccCC
Confidence            589999999999999999999944                           3456777777665432221    123578


Q ss_pred             CCcccchhhhcCC--CCccchhHhHHHHHHHHHhCCCCCCC
Q 025467           77 RHYRAPEVILGLG--WTYPCDIWSVGCILVELCTGEALFQT  115 (252)
Q Consensus        77 ~~y~aPE~l~~~~--~~~~~Diws~G~~l~~l~~g~~pf~~  115 (252)
                      ..|++||.+.+..  .+.++|+||+|++++++++|..||..
T Consensus       170 ~~y~aPE~~~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~  210 (288)
T cd05583         170 IEYMAPEVIRGGSGGHDKAVDWWSLGVLTFELLTGASPFTV  210 (288)
T ss_pred             ccccCHHHhcCCCCCCcchhhhHHHHHHHHHHHhCCCCccc
Confidence            8899999987654  67899999999999999999999864

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines

>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases

Probab=99.91  E-value=1.6e-24  Score=175.55  Aligned_cols=91  Identities=22%  Similarity=0.265  Sum_probs=68.9

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCC--CccccCCC
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ--NYIVSTRH   78 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~--~~~~~t~~   78 (252)
                      ||+|||+.|++||||||+||+++.++                           .++++|||++.......  .....+..
T Consensus       124 al~~lH~~~i~H~dikp~nili~~~~---------------------------~~kl~dfgl~~~~~~~~~~~~~~~~~~  176 (270)
T cd05047         124 GMDYLSQKQFIHRDLAARNILVGENY---------------------------VAKIADFGLSRGQEVYVKKTMGRLPVR  176 (270)
T ss_pred             HHHHHHHCCEeecccccceEEEcCCC---------------------------eEEECCCCCccccchhhhccCCCCccc
Confidence            68999999999999999999995544                           45666666553211111  11123557


Q ss_pred             cccchhhhcCCCCccchhHhHHHHHHHHHh-CCCCCCCCCh
Q 025467           79 YRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHEN  118 (252)
Q Consensus        79 y~aPE~l~~~~~~~~~Diws~G~~l~~l~~-g~~pf~~~~~  118 (252)
                      |+|||++....++.++|+|||||+++++++ |..||.+.+.
T Consensus       177 y~apE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~  217 (270)
T cd05047         177 WMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTC  217 (270)
T ss_pred             cCChHHHccCCCCchhhHHHHHHHHHHHHcCCCCCccccCH
Confidence            999999988888999999999999999997 9999976443

Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l

>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2

Probab=99.91  E-value=2.3e-24  Score=177.62  Aligned_cols=91  Identities=24%  Similarity=0.364  Sum_probs=70.2

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCC-----Ccccc
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ-----NYIVS   75 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~-----~~~~~   75 (252)
                      ||+|||++||+||||||+||+++.++                           .++|+|||.+.......     ....+
T Consensus       149 al~~LH~~givH~dlkp~Nili~~~~---------------------------~~kl~D~g~~~~~~~~~~~~~~~~~~~  201 (304)
T cd05101         149 GMEYLASQKCIHRDLAARNVLVTENN---------------------------VMKIADFGLARDVNNIDYYKKTTNGRL  201 (304)
T ss_pred             HHHHHHHCCeeecccccceEEEcCCC---------------------------cEEECCCccceecccccccccccCCCC
Confidence            68999999999999999999995444                           45666666655432211     11234


Q ss_pred             CCCcccchhhhcCCCCccchhHhHHHHHHHHHh-CCCCCCCCCh
Q 025467           76 TRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHEN  118 (252)
Q Consensus        76 t~~y~aPE~l~~~~~~~~~Diws~G~~l~~l~~-g~~pf~~~~~  118 (252)
                      +..|+|||++.+..++.++||||+||++|++++ |..||.+...
T Consensus       202 ~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~  245 (304)
T cd05101         202 PVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPV  245 (304)
T ss_pred             CceeeCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCH
Confidence            567999999988889999999999999999998 7788866543

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron

Probab=99.91  E-value=3.1e-24  Score=172.95  Aligned_cols=90  Identities=24%  Similarity=0.303  Sum_probs=67.4

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCC-------CCcc
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD-------QNYI   73 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~-------~~~~   73 (252)
                      ||+|||+.+++||||||+|||++.++.                           ++++|||.+......       ....
T Consensus       110 ~l~~lH~~~i~H~dlk~~nili~~~~~---------------------------~kl~dfg~~~~~~~~~~~~~~~~~~~  162 (262)
T cd05058         110 GMEYLASKKFVHRDLAARNCMLDESFT---------------------------VKVADFGLARDIYDKEYYSVHNHTGA  162 (262)
T ss_pred             HHHHHHhCCccccccCcceEEEcCCCc---------------------------EEECCccccccccCCcceeecccccC
Confidence            689999999999999999999965544                           455555554322111       1112


Q ss_pred             ccCCCcccchhhhcCCCCccchhHhHHHHHHHHHhC-CCCCCCCC
Q 025467           74 VSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG-EALFQTHE  117 (252)
Q Consensus        74 ~~t~~y~aPE~l~~~~~~~~~Diws~G~~l~~l~~g-~~pf~~~~  117 (252)
                      .++..|+|||.+.+..++.++||||+||++|++++| .+||...+
T Consensus       163 ~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~  207 (262)
T cd05058         163 KLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVD  207 (262)
T ss_pred             cCCccccChhHhccCccchHHHHHHHHHHHHHHHcCCCCCCCCCC
Confidence            346679999999888899999999999999999995 56665443

Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca

>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6

Probab=99.91  E-value=2.1e-24  Score=174.42  Aligned_cols=89  Identities=30%  Similarity=0.585  Sum_probs=71.2

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCC---CccccCC
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ---NYIVSTR   77 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~---~~~~~t~   77 (252)
                      ||+|||++|++|+||+|+||+++.++                           .++++|||.+.......   ....++.
T Consensus       118 ~l~~LH~~~i~H~dl~~~nil~~~~~---------------------------~~~l~d~g~~~~~~~~~~~~~~~~~~~  170 (267)
T cd08228         118 AVEHMHSRRVMHRDIKPANVFITATG---------------------------VVKLGDLGLGRFFSSKTTAAHSLVGTP  170 (267)
T ss_pred             HHHHHhhCCeeCCCCCHHHEEEcCCC---------------------------CEEECccccceeccchhHHHhcCCCCc
Confidence            68999999999999999999995544                           45666666655432211   1235778


Q ss_pred             CcccchhhhcCCCCccchhHhHHHHHHHHHhCCCCCCCC
Q 025467           78 HYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTH  116 (252)
Q Consensus        78 ~y~aPE~l~~~~~~~~~Diws~G~~l~~l~~g~~pf~~~  116 (252)
                      .|+|||.+.+..++.++|+||+|+++|++++|..||...
T Consensus       171 ~~~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~p~~~~  209 (267)
T cd08228         171 YYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGD  209 (267)
T ss_pred             cccChhhhccCCCCchhhHHHHHHHHHHHhcCCCCCccc
Confidence            899999998888899999999999999999999998653

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase

>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases

Probab=99.91  E-value=2.8e-24  Score=173.22  Aligned_cols=93  Identities=30%  Similarity=0.414  Sum_probs=71.1

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCCC-c---cccC
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQN-Y---IVST   76 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~~-~---~~~t   76 (252)
                      ||.|||+.||+||||||+||+++.++                           .++|+|||.+........ .   ...+
T Consensus       115 ~l~~lH~~~i~H~dl~p~Nil~~~~~---------------------------~~~l~dfg~~~~~~~~~~~~~~~~~~~  167 (261)
T cd05068         115 GMAYLEAQNYIHRDLAARNVLVGENN---------------------------ICKVADFGLARVIKEDIYEAREGAKFP  167 (261)
T ss_pred             HHHHHHhCCeeeccCCcceEEEcCCC---------------------------CEEECCcceEEEccCCcccccCCCcCc
Confidence            68999999999999999999995444                           466666666554322111 1   1123


Q ss_pred             CCcccchhhhcCCCCccchhHhHHHHHHHHHh-CCCCCCCCChHH
Q 025467           77 RHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHENLE  120 (252)
Q Consensus        77 ~~y~aPE~l~~~~~~~~~Diws~G~~l~~l~~-g~~pf~~~~~~~  120 (252)
                      ..|+|||++.+..++.++|+||+||+++++++ |..||.+.+...
T Consensus       168 ~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~  212 (261)
T cd05068         168 IKWTAPEAALYNRFSIKSDVWSFGILLTEIVTYGRMPYPGMTNAE  212 (261)
T ss_pred             eeccCccccccCCCCchhhHHHHHHHHHHHHhcCCCCCCCCCHHH
Confidence            46999999988888999999999999999999 999997655443

Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a

>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa

Probab=99.91  E-value=3.1e-24  Score=172.75  Aligned_cols=93  Identities=26%  Similarity=0.354  Sum_probs=70.2

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCC------Cccc
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ------NYIV   74 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~------~~~~   74 (252)
                      ||+|||++|++||||||+||+++.++                           .++++|||.+.......      ....
T Consensus       107 ~l~~lH~~~i~H~dlkp~nil~~~~~---------------------------~~kl~dfg~~~~~~~~~~~~~~~~~~~  159 (257)
T cd05115         107 GMKYLEGKNFVHRDLAARNVLLVNQH---------------------------YAKISDFGLSKALGADDSYYKARSAGK  159 (257)
T ss_pred             HHHHHHhcCeeecccchheEEEcCCC---------------------------cEEeccCCccccccCCccceeccCCCC
Confidence            68999999999999999999995544                           45555665554322111      1112


Q ss_pred             cCCCcccchhhhcCCCCccchhHhHHHHHHHHHh-CCCCCCCCChHH
Q 025467           75 STRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHENLE  120 (252)
Q Consensus        75 ~t~~y~aPE~l~~~~~~~~~Diws~G~~l~~l~~-g~~pf~~~~~~~  120 (252)
                      ++..|+|||.+....++.++|+|||||++|++++ |..||......+
T Consensus       160 ~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~  206 (257)
T cd05115         160 WPLKWYAPECINFRKFSSRSDVWSYGITMWEAFSYGQKPYKKMKGPE  206 (257)
T ss_pred             CCcccCCHHHHccCCCCchhhHHHHHHHHHHHhcCCCCCcCcCCHHH
Confidence            3567999999988888999999999999999996 999997655433

Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho

>KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning]

Probab=99.91  E-value=8.2e-25  Score=185.89  Aligned_cols=174  Identities=26%  Similarity=0.412  Sum_probs=120.3

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCC--ccccCC---------------CCCCceEEeecCCc
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDS--SYFKRM---------------PKSSAIKVIDFGST   63 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~--~~~~~~---------------~~~~~~~l~dfg~~   63 (252)
                      |+++.|.+|+|||||||.||||+.+|..|++|||++....+..  .++...               +...++|+..+...
T Consensus       741 AiesVHkmGFIHRDiKPDNILIDrdGHIKLTDFGLCTGfRWTHdskYYq~gdH~RqDSmep~~e~~d~~~~lkvL~~ra~  820 (1034)
T KOG0608|consen  741 AIESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDSKYYQEGDHHRQDSMEPSPEWADISKCLKVLERRAM  820 (1034)
T ss_pred             HHHHHHhccceecccCccceEEccCCceeeeeccccccceeccccccccCCCccccccCCCchhhccccccchHHHHHHH
Confidence            6789999999999999999999999999999999998875432  222210               00111222111111


Q ss_pred             cccC-CCCCccccCCCcccchhhhcCCCCccchhHhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhH
Q 025467           64 TYER-PDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDR  142 (252)
Q Consensus        64 ~~~~-~~~~~~~~t~~y~aPE~l~~~~~~~~~Diws~G~~l~~l~~g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~  142 (252)
                      +... ..-...+||+.|+|||++...+|+..+|+||.|||||+|+.|++||...+..+...++..               
T Consensus       821 ~~h~r~~ahslvgt~nyiapevl~r~g~~q~cdwws~gvil~em~~g~~pf~~~tp~~tq~kv~n---------------  885 (1034)
T KOG0608|consen  821 RQHQRILAHSLVGTPNYIAPEVLARTGYTQLCDWWSVGVILYEMLVGQPPFLADTPGETQYKVIN---------------  885 (1034)
T ss_pred             hhhhhhhhhhhcCCCcccChHHhcccCccccchhhHhhHHHHHHhhCCCCccCCCCCcceeeeee---------------
Confidence            1110 011235899999999999999999999999999999999999999987654332221110               


Q ss_pred             HHHHHhhcCCCCCCccccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHH
Q 025467          143 HAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLL  222 (252)
Q Consensus       143 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll  222 (252)
                                            ++..+.                                     .......+.++.++|
T Consensus       886 ----------------------w~~~l~-------------------------------------~~~~~~ls~e~~~li  906 (1034)
T KOG0608|consen  886 ----------------------WRNFLH-------------------------------------IPYQGNLSKEALDLI  906 (1034)
T ss_pred             ----------------------hhhccc-------------------------------------cccccccCHHHHHHH
Confidence                                  001111                                     111245677999999


Q ss_pred             HHhccCCCCCCCC---HHHHHcCCCCCCcc
Q 025467          223 QGLLRYDPTDRLT---AREALRHPFFTRDH  249 (252)
Q Consensus       223 ~~~L~~dP~~R~t---a~e~l~hpwf~~~~  249 (252)
                      .+ |.-++++|+.   ++++-.||||+...
T Consensus       907 ~k-Lc~sad~RLGkng~d~vKaHpfFkgID  935 (1034)
T KOG0608|consen  907 QK-LCCSADSRLGKNGADQVKAHPFFKGID  935 (1034)
T ss_pred             HH-HhcChhhhhcccchhhhhcCccccccc
Confidence            98 5568899985   88999999999754

>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes

Probab=99.91  E-value=3e-24  Score=172.16  Aligned_cols=90  Identities=23%  Similarity=0.364  Sum_probs=67.6

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCCC-----cccc
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQN-----YIVS   75 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~~-----~~~~   75 (252)
                      ||+|||++||+||||||+||+++.++.                           ++++|||.+........     ....
T Consensus       106 ~L~~lH~~~i~H~dl~p~nil~~~~~~---------------------------~kl~dfg~~~~~~~~~~~~~~~~~~~  158 (252)
T cd05084         106 GMEYLESKHCIHRDLAARNCLVTEKNV---------------------------LKISDFGMSREEEDGVYASTGGMKQI  158 (252)
T ss_pred             HHHHHHhCCccccccchheEEEcCCCc---------------------------EEECccccCcccccccccccCCCCCC
Confidence            689999999999999999999965444                           55555555443221110     1122


Q ss_pred             CCCcccchhhhcCCCCccchhHhHHHHHHHHHh-CCCCCCCCC
Q 025467           76 TRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHE  117 (252)
Q Consensus        76 t~~y~aPE~l~~~~~~~~~Diws~G~~l~~l~~-g~~pf~~~~  117 (252)
                      +..|+|||.+.+..++.++|+||+||++|++++ |..||....
T Consensus       159 ~~~y~aPE~~~~~~~~~~~Dv~slG~il~e~~~~~~~p~~~~~  201 (252)
T cd05084         159 PVKWTAPEALNYGRYSSESDVWSFGILLWEAFSLGAVPYANLS  201 (252)
T ss_pred             ceeecCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccC
Confidence            456999999988889999999999999999998 888886543

Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular

>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases

Probab=99.91  E-value=4.1e-24  Score=175.39  Aligned_cols=95  Identities=25%  Similarity=0.331  Sum_probs=70.9

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCC-----Ccccc
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ-----NYIVS   75 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~-----~~~~~   75 (252)
                      ||+|||++|++||||||+||+++.++                           .++++|||.+.......     ....+
T Consensus       141 al~~lH~~~i~H~dlkp~Nill~~~~---------------------------~~kl~dfg~~~~~~~~~~~~~~~~~~~  193 (295)
T cd05097         141 GMKYLASLNFVHRDLATRNCLVGNHY---------------------------TIKIADFGMSRNLYSGDYYRIQGRAVL  193 (295)
T ss_pred             HHHHHHhcCeeccccChhhEEEcCCC---------------------------cEEecccccccccccCcceeccCcCcC
Confidence            68999999999999999999995544                           45566666554321111     11234


Q ss_pred             CCCcccchhhhcCCCCccchhHhHHHHHHHHHh--CCCCCCCCChHHHH
Q 025467           76 TRHYRAPEVILGLGWTYPCDIWSVGCILVELCT--GEALFQTHENLEHL  122 (252)
Q Consensus        76 t~~y~aPE~l~~~~~~~~~Diws~G~~l~~l~~--g~~pf~~~~~~~~~  122 (252)
                      +..|+|||.+.+..++.++|+|||||+++++++  +..||........+
T Consensus       194 ~~~y~aPE~~~~~~~~~~~DvwSlG~~l~el~~~~~~~p~~~~~~~~~~  242 (295)
T cd05097         194 PIRWMAWESILLGKFTTASDVWAFGVTLWEMFTLCKEQPYSLLSDEQVI  242 (295)
T ss_pred             ceeecChhhhccCCcCchhhHHHHHHHHHHHHHcCCCCCCcccChHHHH
Confidence            668999999988889999999999999999988  66788765544433

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including

>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases

Probab=99.91  E-value=3.6e-24  Score=173.09  Aligned_cols=92  Identities=26%  Similarity=0.376  Sum_probs=69.9

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCC-----Ccccc
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ-----NYIVS   75 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~-----~~~~~   75 (252)
                      ||+|||++||+|+||||+||+++.++.                           ++++|||.+.......     ....+
T Consensus       118 ~l~~Lh~~~i~H~di~p~nili~~~~~---------------------------~~l~dfg~~~~~~~~~~~~~~~~~~~  170 (266)
T cd05033         118 GMKYLSEMNYVHRDLAARNILVNSNLV---------------------------CKVSDFGLSRRLEDSEATYTTKGGKI  170 (266)
T ss_pred             HHHHHHhCCcccCCCCcceEEEcCCCC---------------------------EEECccchhhcccccccceeccCCCC
Confidence            589999999999999999999965444                           5555555554332100     01234


Q ss_pred             CCCcccchhhhcCCCCccchhHhHHHHHHHHHh-CCCCCCCCChH
Q 025467           76 TRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHENL  119 (252)
Q Consensus        76 t~~y~aPE~l~~~~~~~~~Diws~G~~l~~l~~-g~~pf~~~~~~  119 (252)
                      +..|+|||.+.+..++.++|+||+||++|++++ |..||......
T Consensus       171 ~~~y~~Pe~~~~~~~~~~~Dv~slG~~l~~l~~~g~~p~~~~~~~  215 (266)
T cd05033         171 PIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSYGERPYWDMSNQ  215 (266)
T ss_pred             CccccChhhhccCCCccccchHHHHHHHHHHHccCCCCCCCCCHH
Confidence            567999999988889999999999999999987 99998655443

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment

>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases

Probab=99.91  E-value=3.7e-24  Score=171.42  Aligned_cols=91  Identities=25%  Similarity=0.375  Sum_probs=69.8

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCC-----Ccccc
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ-----NYIVS   75 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~-----~~~~~   75 (252)
                      ||+|||+++++||||+|+||+++.++                           .++++|||.+.......     .....
T Consensus       105 ~l~~lH~~~i~h~di~p~nili~~~~---------------------------~~~l~d~g~~~~~~~~~~~~~~~~~~~  157 (251)
T cd05041         105 GMEYLESKNCIHRDLAARNCLVGENN---------------------------VLKISDFGMSREEEGGIYTVSDGLKQI  157 (251)
T ss_pred             HHHHHHhCCEehhhcCcceEEEcCCC---------------------------cEEEeeccccccccCCcceeccccCcc
Confidence            58899999999999999999995444                           46666666655332111     11123


Q ss_pred             CCCcccchhhhcCCCCccchhHhHHHHHHHHHh-CCCCCCCCCh
Q 025467           76 TRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHEN  118 (252)
Q Consensus        76 t~~y~aPE~l~~~~~~~~~Diws~G~~l~~l~~-g~~pf~~~~~  118 (252)
                      +..|+|||.+.+..++.++|+||+||+++++++ |..||.....
T Consensus       158 ~~~y~~PE~~~~~~~~~~~Di~slG~i~~~l~t~~~~p~~~~~~  201 (251)
T cd05041         158 PIKWTAPEALNYGRYTSESDVWSYGILLWETFSLGDTPYPGMSN  201 (251)
T ss_pred             eeccCChHhhccCCCCcchhHHHHHHHHHHHHhccCCCCccCCH
Confidence            456999999988889999999999999999999 8888876543

Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k

>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase

Probab=99.91  E-value=2.3e-24  Score=194.37  Aligned_cols=100  Identities=29%  Similarity=0.501  Sum_probs=77.2

Q ss_pred             ccCCCcccchhhhcCCCCccchhHhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHHHHHHhhcCCC
Q 025467           74 VSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRL  153 (252)
Q Consensus        74 ~~t~~y~aPE~l~~~~~~~~~Diws~G~~l~~l~~g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~  153 (252)
                      +||+.|+|||++.+..++.++||||+||++|+|++|..||.+......+..+...                       ..
T Consensus       541 vGT~~Y~APE~l~~~~~~~~~DiwSlG~il~ElltG~~pf~~~~~~~~~~~il~~-----------------------~~  597 (669)
T cd05610         541 LGTPDYLAPELLLGKPHGPAVDWWALGVCLFEFLTGIPPFNDETPQQVFQNILNR-----------------------DI  597 (669)
T ss_pred             eeCccccCHHHcCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhc-----------------------CC
Confidence            6799999999999989999999999999999999999999876544433322110                       01


Q ss_pred             CCCccccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCCC
Q 025467          154 DWPEGAASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDR  233 (252)
Q Consensus       154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R  233 (252)
                      .++..                                                    ....+..+.+++.+||..||.+|
T Consensus       598 ~~p~~----------------------------------------------------~~~~~~~~~~~l~~lL~~dP~~R  625 (669)
T cd05610         598 PWPEG----------------------------------------------------EEKLSVNAQNAIEILLTMDPTKR  625 (669)
T ss_pred             CCCcc----------------------------------------------------cccCCHHHHHHHHHHcccChhHC
Confidence            11100                                                    01234578899999999999999


Q ss_pred             CCHHHHHcCCCCCCc
Q 025467          234 LTAREALRHPFFTRD  248 (252)
Q Consensus       234 ~ta~e~l~hpwf~~~  248 (252)
                      |||.++|+||||...
T Consensus       626 ~ta~e~l~h~~~~~~  640 (669)
T cd05610         626 AGLKELKQHPLFHGV  640 (669)
T ss_pred             cCHHHHHhCHhhcCC
Confidence            999999999999875

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481

>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1

Probab=99.91  E-value=3.1e-24  Score=177.11  Aligned_cols=90  Identities=26%  Similarity=0.371  Sum_probs=68.9

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCC-----Ccccc
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ-----NYIVS   75 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~-----~~~~~   75 (252)
                      ||+|||++|++||||||+||+++.++                           .++|+|||.+.......     ....+
T Consensus       152 aL~~lH~~gi~H~dlkp~Nill~~~~---------------------------~~kL~dfg~a~~~~~~~~~~~~~~~~~  204 (307)
T cd05098         152 GMEYLASKKCIHRDLAARNVLVTEDN---------------------------VMKIADFGLARDIHHIDYYKKTTNGRL  204 (307)
T ss_pred             HHHHHHHCCcccccccHHheEEcCCC---------------------------cEEECCCcccccccccchhhccccCCC
Confidence            68999999999999999999995544                           45666666554322111     11123


Q ss_pred             CCCcccchhhhcCCCCccchhHhHHHHHHHHHh-CCCCCCCCC
Q 025467           76 TRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHE  117 (252)
Q Consensus        76 t~~y~aPE~l~~~~~~~~~Diws~G~~l~~l~~-g~~pf~~~~  117 (252)
                      +..|+|||.+.+..++.++|+||+||++|+|++ |..||.+..
T Consensus       205 ~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~~~g~~p~~~~~  247 (307)
T cd05098         205 PVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVP  247 (307)
T ss_pred             ccceeChHHhccCCCCcHHHHHHHHHHHHHHHcCCCCCCCcCC
Confidence            467999999988888999999999999999998 888886544

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk

Probab=99.91  E-value=4.6e-24  Score=171.86  Aligned_cols=95  Identities=27%  Similarity=0.380  Sum_probs=71.7

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCC---CccccCC
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ---NYIVSTR   77 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~---~~~~~t~   77 (252)
                      ||+|||++||+|+||+|+||+++.++.                           ++++|||.+.......   ....++.
T Consensus       116 al~~lH~~~i~h~dl~~~nilv~~~~~---------------------------~kl~d~g~~~~~~~~~~~~~~~~~~~  168 (261)
T cd05148         116 GMAYLEEQNSIHRDLAARNILVGEDLV---------------------------CKVADFGLARLIKEDVYLSSDKKIPY  168 (261)
T ss_pred             HHHHHHHCCeeccccCcceEEEcCCce---------------------------EEEccccchhhcCCccccccCCCCce
Confidence            689999999999999999999965544                           5555665554322111   1123456


Q ss_pred             CcccchhhhcCCCCccchhHhHHHHHHHHHh-CCCCCCCCChHHHH
Q 025467           78 HYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHENLEHL  122 (252)
Q Consensus        78 ~y~aPE~l~~~~~~~~~Diws~G~~l~~l~~-g~~pf~~~~~~~~~  122 (252)
                      .|++||.+....++.++|+||+||+++++++ |..||.+....+.+
T Consensus       169 ~~~~PE~~~~~~~~~~~DiwslG~~l~~l~~~g~~p~~~~~~~~~~  214 (261)
T cd05148         169 KWTAPEAASHGTFSTKSDVWSFGILLYEMFTYGQVPYPGMNNHEVY  214 (261)
T ss_pred             EecCHHHHccCCCCchhhHHHHHHHHHHHHcCCCCCCCcCCHHHHH
Confidence            7999999988888999999999999999998 89999765543333

Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom

>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase

Probab=99.91  E-value=3.8e-24  Score=171.85  Aligned_cols=92  Identities=27%  Similarity=0.446  Sum_probs=70.4

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCC----CccccC
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ----NYIVST   76 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~----~~~~~t   76 (252)
                      ||+|||+.+++|+||||+||+++.++                           .++++|||.+.......    ....++
T Consensus       112 ~l~~lH~~~i~h~dl~p~ni~i~~~~---------------------------~~~l~d~g~~~~~~~~~~~~~~~~~~~  164 (256)
T cd05112         112 GMAYLESSNVIHRDLAARNCLVGENQ---------------------------VVKVSDFGMTRFVLDDQYTSSTGTKFP  164 (256)
T ss_pred             HHHHHHHCCccccccccceEEEcCCC---------------------------eEEECCCcceeecccCcccccCCCccc
Confidence            57899999999999999999995444                           45666666554322111    111345


Q ss_pred             CCcccchhhhcCCCCccchhHhHHHHHHHHHh-CCCCCCCCChH
Q 025467           77 RHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHENL  119 (252)
Q Consensus        77 ~~y~aPE~l~~~~~~~~~Diws~G~~l~~l~~-g~~pf~~~~~~  119 (252)
                      ..|+|||.+.+..++.++|+||+||++|++++ |..||......
T Consensus       165 ~~~~aPe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~  208 (256)
T cd05112         165 VKWSSPEVFSFSKYSSKSDVWSFGVLMWEVFSEGKTPYENRSNS  208 (256)
T ss_pred             hhhcCHhHhccCCcChHHHHHHHHHHHHHHHcCCCCCCCcCCHH
Confidence            67999999988888999999999999999998 89999765543

Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ

>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3

Probab=99.91  E-value=3.8e-24  Score=178.67  Aligned_cols=92  Identities=25%  Similarity=0.354  Sum_probs=70.2

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCC-----Ccccc
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ-----NYIVS   75 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~-----~~~~~   75 (252)
                      ||+|||++||+||||||+||+++.++                           .++|+|||.++......     ....+
T Consensus       146 al~~LH~~givH~dlkp~Nill~~~~---------------------------~~kL~Dfg~~~~~~~~~~~~~~~~~~~  198 (334)
T cd05100         146 GMEYLASQKCIHRDLAARNVLVTEDN---------------------------VMKIADFGLARDVHNIDYYKKTTNGRL  198 (334)
T ss_pred             HHHHHHHCCeeccccccceEEEcCCC---------------------------cEEECCcccceecccccccccccCCCc
Confidence            68999999999999999999995544                           45566666554322211     11123


Q ss_pred             CCCcccchhhhcCCCCccchhHhHHHHHHHHHh-CCCCCCCCChH
Q 025467           76 TRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHENL  119 (252)
Q Consensus        76 t~~y~aPE~l~~~~~~~~~Diws~G~~l~~l~~-g~~pf~~~~~~  119 (252)
                      +..|+|||++.+..++.++||||+||++|+|++ |..||.+.+..
T Consensus       199 ~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~  243 (334)
T cd05100         199 PVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPVE  243 (334)
T ss_pred             CceEcCHHHhccCCcCchhhhHHHHHHHHHHHhcCCCCCCCCCHH
Confidence            457999999988889999999999999999998 88888765543

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase

Probab=99.91  E-value=5.1e-24  Score=174.18  Aligned_cols=91  Identities=22%  Similarity=0.357  Sum_probs=69.4

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCC-----CCcccc
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD-----QNYIVS   75 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~-----~~~~~~   75 (252)
                      ||+|||+.|++||||||+||++..++                           .++++|||.+......     ......
T Consensus       142 aL~~lH~~~i~H~dl~p~nil~~~~~---------------------------~~~l~dfg~~~~~~~~~~~~~~~~~~~  194 (288)
T cd05050         142 GMAYLSERKFVHRDLATRNCLVGENM---------------------------VVKIADFGLSRNIYSADYYKASENDAI  194 (288)
T ss_pred             HHHHHHhCCeecccccHhheEecCCC---------------------------ceEECccccceecccCccccccCCCcc
Confidence            68999999999999999999995544                           4566666655432111     111234


Q ss_pred             CCCcccchhhhcCCCCccchhHhHHHHHHHHHh-CCCCCCCCCh
Q 025467           76 TRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHEN  118 (252)
Q Consensus        76 t~~y~aPE~l~~~~~~~~~Diws~G~~l~~l~~-g~~pf~~~~~  118 (252)
                      +..|+|||.+.+..++.++|+||+||++|+|++ |..||.+...
T Consensus       195 ~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~~~~p~~~~~~  238 (288)
T cd05050         195 PIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGMQPYYGMAH  238 (288)
T ss_pred             ChhhcCHHHHhcCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCH
Confidence            567999999988889999999999999999997 8888865544

Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M

>KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms]

Probab=99.91  E-value=9.1e-25  Score=184.62  Aligned_cols=88  Identities=28%  Similarity=0.409  Sum_probs=70.1

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCC-----CCcccc
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD-----QNYIVS   75 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~-----~~~~~~   75 (252)
                      |+.|||.++|||||||..||++..+                           ..++|+|||++......     .....|
T Consensus       500 GM~YLHAK~IIHrDLKSnNIFl~~~---------------------------~kVkIgDFGLatvk~~w~g~~q~~qp~g  552 (678)
T KOG0193|consen  500 GMDYLHAKNIIHRDLKSNNIFLHED---------------------------LKVKIGDFGLATVKTRWSGEQQLEQPHG  552 (678)
T ss_pred             hhhhhhhhhhhhhhccccceEEccC---------------------------CcEEEecccceeeeeeeccccccCCCcc
Confidence            5789999999999999999999544                           45666666665432221     122357


Q ss_pred             CCCcccchhhhc---CCCCccchhHhHHHHHHHHHhCCCCCCC
Q 025467           76 TRHYRAPEVILG---LGWTYPCDIWSVGCILVELCTGEALFQT  115 (252)
Q Consensus        76 t~~y~aPE~l~~---~~~~~~~Diws~G~~l~~l~~g~~pf~~  115 (252)
                      ...|||||++..   .+|++.+|||||||++|||++|..||..
T Consensus       553 silwmAPEvIRmqd~nPfS~qSDVYaFGiV~YELltg~lPysi  595 (678)
T KOG0193|consen  553 SLLWMAPEVIRMQDDNPFSFQSDVYAFGIVWYELLTGELPYSI  595 (678)
T ss_pred             chhhhcHHHHhhcccCCCCcccchhhhhHHHHHHHhCcCCcCC
Confidence            788999999974   4799999999999999999999999983

>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase)

Probab=99.91  E-value=4.5e-24  Score=173.78  Aligned_cols=91  Identities=21%  Similarity=0.339  Sum_probs=70.6

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCC-----Ccccc
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ-----NYIVS   75 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~-----~~~~~   75 (252)
                      ||+|||+++++||||||+||+++.++                           .++++|||+++......     ....+
T Consensus       129 ~l~~LH~~~i~H~di~p~nil~~~~~---------------------------~~kl~d~g~~~~~~~~~~~~~~~~~~~  181 (280)
T cd05043         129 GMSYLHKRGVIHKDIAARNCVIDEEL---------------------------QVKITDNALSRDLFPMDYHCLGDNENR  181 (280)
T ss_pred             HHHHHHHCCEeecccCHhhEEEcCCC---------------------------cEEECCCCCcccccCCceEEeCCCCCc
Confidence            68999999999999999999995544                           45566666654332211     11234


Q ss_pred             CCCcccchhhhcCCCCccchhHhHHHHHHHHHh-CCCCCCCCCh
Q 025467           76 TRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHEN  118 (252)
Q Consensus        76 t~~y~aPE~l~~~~~~~~~Diws~G~~l~~l~~-g~~pf~~~~~  118 (252)
                      +..|+|||++.+..++.++||||+||++|++++ |..||...+.
T Consensus       182 ~~~y~apE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~  225 (280)
T cd05043         182 PVKWMALESLVNKEYSSASDVWSFGVLLWELMTLGQTPYVEIDP  225 (280)
T ss_pred             chhccCHHHHhcCCCCchhhHHHhHHHHHHHhcCCCCCcCcCCH
Confidence            567999999988889999999999999999998 9999976543

Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It

>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2

Probab=99.91  E-value=7.9e-24  Score=173.82  Aligned_cols=93  Identities=25%  Similarity=0.336  Sum_probs=70.3

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCC-----Ccccc
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ-----NYIVS   75 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~-----~~~~~   75 (252)
                      ||+|||++||+||||||+||+++.++                           .++++|||.+.......     ....+
T Consensus       142 al~~lH~~~i~H~dlkp~Nili~~~~---------------------------~~~l~dfg~~~~~~~~~~~~~~~~~~~  194 (296)
T cd05095         142 GMKYLSSLNFVHRDLATRNCLVGKNY---------------------------TIKIADFGMSRNLYSGDYYRIQGRAVL  194 (296)
T ss_pred             HHHHHHHCCeecccCChheEEEcCCC---------------------------CEEeccCcccccccCCcceeccCcCcC
Confidence            68999999999999999999995444                           45666666654322111     11233


Q ss_pred             CCCcccchhhhcCCCCccchhHhHHHHHHHHHh--CCCCCCCCChHH
Q 025467           76 TRHYRAPEVILGLGWTYPCDIWSVGCILVELCT--GEALFQTHENLE  120 (252)
Q Consensus        76 t~~y~aPE~l~~~~~~~~~Diws~G~~l~~l~~--g~~pf~~~~~~~  120 (252)
                      +..|++||+..+..++.++|+||+||++|++++  |..||...+..+
T Consensus       195 ~~~~~~pe~~~~~~~~~~~DiwSlG~~l~el~~~~~~~p~~~~~~~~  241 (296)
T cd05095         195 PIRWMSWESILLGKFTTASDVWAFGVTLWEILTLCKEQPYSQLSDEQ  241 (296)
T ss_pred             ccccCCHHHHhcCCccchhhhhHHHHHHHHHHHhCCCCCccccChHH
Confidence            567999999888889999999999999999998  678886554433

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit

>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=99.91  E-value=8.7e-24  Score=171.77  Aligned_cols=96  Identities=25%  Similarity=0.402  Sum_probs=72.4

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCCCccccCCCcc
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYR   80 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~~~~~~t~~y~   80 (252)
                      ||+|||++||+||||||+|||++..+...                    .....+++.|||.+....... ...++..|+
T Consensus       129 ~l~~lH~~~iiH~dlkp~Nill~~~~~~~--------------------~~~~~~kl~d~g~~~~~~~~~-~~~~~~~~~  187 (274)
T cd05076         129 ALSYLEDKNLVHGNVCAKNILLARLGLAE--------------------GTSPFIKLSDPGVSFTALSRE-ERVERIPWI  187 (274)
T ss_pred             HHHHHHcCCccCCCCCcccEEEeccCccc--------------------CccceeeecCCcccccccccc-ccccCCccc
Confidence            68999999999999999999996543110                    123347888998775433222 235677899


Q ss_pred             cchhhhc-CCCCccchhHhHHHHHHHHH-hCCCCCCCCC
Q 025467           81 APEVILG-LGWTYPCDIWSVGCILVELC-TGEALFQTHE  117 (252)
Q Consensus        81 aPE~l~~-~~~~~~~Diws~G~~l~~l~-~g~~pf~~~~  117 (252)
                      |||.+.+ ..++.++|+||+||++|+++ +|..||....
T Consensus       188 aPe~~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~  226 (274)
T cd05076         188 APECVPGGNSLSTAADKWSFGTTLLEICFDGEVPLKERT  226 (274)
T ss_pred             CchhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCccccC
Confidence            9998875 45789999999999999985 6889986543

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt

>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7

Probab=99.90  E-value=7.1e-24  Score=171.33  Aligned_cols=89  Identities=30%  Similarity=0.592  Sum_probs=71.3

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCC---CccccCC
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ---NYIVSTR   77 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~---~~~~~t~   77 (252)
                      ||+|||++|++|+||||+||+++.++                           .+++.|||.+.......   ....++.
T Consensus       118 ~l~~LH~~~i~H~dl~p~nili~~~~---------------------------~~~l~dfg~~~~~~~~~~~~~~~~~~~  170 (267)
T cd08229         118 ALEHMHSRRVMHRDIKPANVFITATG---------------------------VVKLGDLGLGRFFSSKTTAAHSLVGTP  170 (267)
T ss_pred             HHHHHHHCCeecCCCCHHHEEEcCCC---------------------------CEEECcchhhhccccCCcccccccCCc
Confidence            58999999999999999999995444                           46666666654332211   1235788


Q ss_pred             CcccchhhhcCCCCccchhHhHHHHHHHHHhCCCCCCCC
Q 025467           78 HYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTH  116 (252)
Q Consensus        78 ~y~aPE~l~~~~~~~~~Diws~G~~l~~l~~g~~pf~~~  116 (252)
                      .|+|||.+.+..++.++|+||+|+++|++++|..||.+.
T Consensus       171 ~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~  209 (267)
T cd08229         171 YYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGD  209 (267)
T ss_pred             CccCHHHhcCCCccchhhHHHHHHHHHHHHhCCCCcccc
Confidence            899999998888899999999999999999999998654

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.

>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2

Probab=99.90  E-value=7.2e-24  Score=171.46  Aligned_cols=93  Identities=29%  Similarity=0.406  Sum_probs=69.8

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCCC------ccc
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQN------YIV   74 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~~------~~~   74 (252)
                      ||+|||+.|++||||||+||+++.++                           .++++|||.+........      ...
T Consensus       119 al~~lH~~~i~H~dlkp~Nili~~~~---------------------------~~kl~dfg~~~~~~~~~~~~~~~~~~~  171 (268)
T cd05063         119 GMKYLSDMNYVHRDLAARNILVNSNL---------------------------ECKVSDFGLSRVLEDDPEGTYTTSGGK  171 (268)
T ss_pred             HHHHHHHCCeeccccchhhEEEcCCC---------------------------cEEECCCccceecccccccceeccCCC
Confidence            68999999999999999999995544                           455566665543221111      012


Q ss_pred             cCCCcccchhhhcCCCCccchhHhHHHHHHHHHh-CCCCCCCCChHH
Q 025467           75 STRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHENLE  120 (252)
Q Consensus        75 ~t~~y~aPE~l~~~~~~~~~Diws~G~~l~~l~~-g~~pf~~~~~~~  120 (252)
                      .+..|+|||++.+..++.++|+||+||++|++++ |..||...+..+
T Consensus       172 ~~~~y~~PE~~~~~~~~~~~Dv~slG~il~ell~~g~~p~~~~~~~~  218 (268)
T cd05063         172 IPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSFGERPYWDMSNHE  218 (268)
T ss_pred             cCceecCHHHhhcCCcChHhHHHHHHHHHHHHHhCCCCCCCcCCHHH
Confidence            2446999999988888999999999999999987 999997655433

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored

>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases

Probab=99.90  E-value=7.2e-24  Score=170.74  Aligned_cols=96  Identities=28%  Similarity=0.380  Sum_probs=72.8

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCC----CccccC
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ----NYIVST   76 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~----~~~~~t   76 (252)
                      ||+|||++|++|+||||+||+++.++                           .++++|||.+.......    .....+
T Consensus       115 al~~lh~~~i~h~di~p~nili~~~~---------------------------~~~l~d~g~~~~~~~~~~~~~~~~~~~  167 (261)
T cd05034         115 GMAYLESRNYIHRDLAARNILVGENL---------------------------VCKIADFGLARLIEDDEYTAREGAKFP  167 (261)
T ss_pred             HHHHHHhCCcccCCcchheEEEcCCC---------------------------CEEECccccceeccchhhhhhhccCCC
Confidence            68999999999999999999995544                           45666666654332211    111235


Q ss_pred             CCcccchhhhcCCCCccchhHhHHHHHHHHHh-CCCCCCCCChHHHHH
Q 025467           77 RHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHENLEHLA  123 (252)
Q Consensus        77 ~~y~aPE~l~~~~~~~~~Diws~G~~l~~l~~-g~~pf~~~~~~~~~~  123 (252)
                      ..|+|||.+.+..++.++|+||+||+++++++ |..||.+......+.
T Consensus       168 ~~y~~PE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~~~~  215 (261)
T cd05034         168 IKWTAPEAANYGRFTIKSDVWSFGILLTEIVTYGRVPYPGMTNREVLE  215 (261)
T ss_pred             ccccCHHHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHH
Confidence            67999999988888999999999999999998 999997765444333

Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t

>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros

Probab=99.90  E-value=9.4e-24  Score=170.81  Aligned_cols=98  Identities=26%  Similarity=0.411  Sum_probs=73.7

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCC-----Ccccc
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ-----NYIVS   75 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~-----~~~~~   75 (252)
                      ||+|||+.+++|+||||+||+++..+.                      +....++++|||.+.......     ....+
T Consensus       118 ~l~~lH~~~i~H~dl~p~nil~~~~~~----------------------~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~  175 (269)
T cd05044         118 GCVYLEQMHFIHRDLAARNCLVSEKGY----------------------DADRVVKIGDFGLARDIYKSDYYRKEGEGLL  175 (269)
T ss_pred             HHHHHHhCCcccCCCChheEEEecCCC----------------------CCCcceEECCcccccccccccccccCcccCC
Confidence            588999999999999999999965431                      112256777777665332111     11234


Q ss_pred             CCCcccchhhhcCCCCccchhHhHHHHHHHHHh-CCCCCCCCChHH
Q 025467           76 TRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHENLE  120 (252)
Q Consensus        76 t~~y~aPE~l~~~~~~~~~Diws~G~~l~~l~~-g~~pf~~~~~~~  120 (252)
                      +..|+|||.+.+..++.++|||||||++|++++ |..||...+..+
T Consensus       176 ~~~y~aPE~~~~~~~~~~~Dv~slG~il~ellt~g~~p~~~~~~~~  221 (269)
T cd05044         176 PVRWMAPESLLDGKFTTQSDVWSFGVLMWEILTLGQQPYPALNNQE  221 (269)
T ss_pred             CccccCHHHHccCCcccchhHHHHHHHHHHHHHcCCCCCcccCHHH
Confidence            567999999998889999999999999999998 999997655433

Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male

>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4

Probab=99.90  E-value=7.7e-24  Score=174.49  Aligned_cols=90  Identities=27%  Similarity=0.363  Sum_probs=70.0

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCC-----Ccccc
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ-----NYIVS   75 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~-----~~~~~   75 (252)
                      ||+|||++||+||||||+||++..++                           .++|+|||.++......     ....+
T Consensus       121 ~L~~LH~~~ivH~dikp~Nill~~~~---------------------------~~kL~Dfg~~~~~~~~~~~~~~~~~~~  173 (303)
T cd05110         121 GMMYLEERRLVHRDLAARNVLVKSPN---------------------------HVKITDFGLARLLEGDEKEYNADGGKM  173 (303)
T ss_pred             HHHHHhhcCeeccccccceeeecCCC---------------------------ceEEccccccccccCcccccccCCCcc
Confidence            68999999999999999999995443                           45666666665332211     11234


Q ss_pred             CCCcccchhhhcCCCCccchhHhHHHHHHHHHh-CCCCCCCCC
Q 025467           76 TRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHE  117 (252)
Q Consensus        76 t~~y~aPE~l~~~~~~~~~Diws~G~~l~~l~~-g~~pf~~~~  117 (252)
                      +..|+|||.+.+..++.++||||+||++|++++ |..||.+..
T Consensus       174 ~~~y~~PE~~~~~~~~~~~DiwslG~~l~el~t~g~~p~~~~~  216 (303)
T cd05110         174 PIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYDGIP  216 (303)
T ss_pred             ccccCCHHHhccCCCChHHHHHHHHHHHHHHHhCCCCCCCCCC
Confidence            668999999988889999999999999999987 889987643

Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin

>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase

Probab=99.90  E-value=7.9e-24  Score=171.46  Aligned_cols=94  Identities=27%  Similarity=0.391  Sum_probs=71.4

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCC----CccccC
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ----NYIVST   76 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~----~~~~~t   76 (252)
                      ||+|||+.|++|+||||+||+++..+                           .++++|||.+.......    ....++
T Consensus       119 ~l~~lH~~~~~H~dl~p~nili~~~~---------------------------~~~l~d~g~~~~~~~~~~~~~~~~~~~  171 (270)
T cd05056         119 ALAYLESKRFVHRDIAARNVLVSSPD---------------------------CVKLGDFGLSRYLEDESYYKASKGKLP  171 (270)
T ss_pred             HHHHHHhCCeeccccChheEEEecCC---------------------------CeEEccCceeeecccccceecCCCCcc
Confidence            68999999999999999999995544                           45666666554322211    111234


Q ss_pred             CCcccchhhhcCCCCccchhHhHHHHHHHHHh-CCCCCCCCChHHH
Q 025467           77 RHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHENLEH  121 (252)
Q Consensus        77 ~~y~aPE~l~~~~~~~~~Diws~G~~l~~l~~-g~~pf~~~~~~~~  121 (252)
                      ..|+|||.+....++.++|+||+||+++++++ |..||.+....+.
T Consensus       172 ~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~~~  217 (270)
T cd05056         172 IKWMAPESINFRRFTSASDVWMFGVCMWEILMLGVKPFQGVKNNDV  217 (270)
T ss_pred             ccccChhhhccCCCCchhhhHHHHHHHHHHHHcCCCCCCCCCHHHH
Confidence            57999999988888999999999999999986 9999977654433

Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions

>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=99.90  E-value=5.9e-24  Score=173.38  Aligned_cols=89  Identities=30%  Similarity=0.362  Sum_probs=69.1

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCC------Cccc
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ------NYIV   74 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~------~~~~   74 (252)
                      ||+|||++||+||||||+||+++.++                           .++|+|||.+.......      ....
T Consensus       119 ~l~~lH~~~i~H~dlkp~Nili~~~~---------------------------~~~l~dfg~~~~~~~~~~~~~~~~~~~  171 (283)
T cd05080         119 GMAYLHSQHYIHRDLAARNVLLDNDR---------------------------LVKIGDFGLAKAVPEGHEYYRVREDGD  171 (283)
T ss_pred             HHHHHHHCCeeccccChheEEEcCCC---------------------------cEEEeecccccccCCcchhhccCCCCC
Confidence            68999999999999999999995544                           45666666554332211      1123


Q ss_pred             cCCCcccchhhhcCCCCccchhHhHHHHHHHHHhCCCCCCCC
Q 025467           75 STRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTH  116 (252)
Q Consensus        75 ~t~~y~aPE~l~~~~~~~~~Diws~G~~l~~l~~g~~pf~~~  116 (252)
                      ++..|+|||.+....++.++||||+||+++++++|..|+...
T Consensus       172 ~~~~~~~PE~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~  213 (283)
T cd05080         172 SPVFWYAVECLKENKFSYASDVWSFGVTLYELLTHCDSKQSP  213 (283)
T ss_pred             CCceeeCHhHhcccCCCcccccHHHHHHHHHHHhCCCCCCCC
Confidence            456799999998888899999999999999999999998643

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign

>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2

Probab=99.90  E-value=8.1e-24  Score=177.34  Aligned_cols=89  Identities=27%  Similarity=0.435  Sum_probs=69.9

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCCC-----cccc
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQN-----YIVS   75 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~~-----~~~~   75 (252)
                      ||+|||++||+||||||.||++..                           ...++++|||.+........     ...+
T Consensus       191 al~~lH~~~i~H~dikp~Nil~~~---------------------------~~~~kl~dfg~~~~~~~~~~~~~~~~~~~  243 (343)
T cd05103         191 GMEFLASRKCIHRDLAARNILLSE---------------------------NNVVKICDFGLARDIYKDPDYVRKGDARL  243 (343)
T ss_pred             HHHHHHhCCeecCCCccCeEEEcC---------------------------CCcEEEEecccccccccCcchhhcCCCCC
Confidence            689999999999999999999954                           34567777776654322111     1234


Q ss_pred             CCCcccchhhhcCCCCccchhHhHHHHHHHHHh-CCCCCCCC
Q 025467           76 TRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTH  116 (252)
Q Consensus        76 t~~y~aPE~l~~~~~~~~~Diws~G~~l~~l~~-g~~pf~~~  116 (252)
                      +..|+|||.+.+..++.++|+||+||++|++++ |..||...
T Consensus       244 ~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~  285 (343)
T cd05103         244 PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGV  285 (343)
T ss_pred             CcceECcHHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCc
Confidence            567999999988889999999999999999997 88998654

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp

>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer

Probab=99.90  E-value=1.1e-23  Score=168.60  Aligned_cols=91  Identities=25%  Similarity=0.362  Sum_probs=69.5

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCC----CccccC
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ----NYIVST   76 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~----~~~~~t   76 (252)
                      ||.|||++|++||||||+||+++.++.                           ++++|||.+.......    ....++
T Consensus       105 ~l~~lH~~~~~H~dl~p~nili~~~~~---------------------------~~l~d~g~~~~~~~~~~~~~~~~~~~  157 (250)
T cd05085         105 GMAYLESKNCIHRDLAARNCLVGENNV---------------------------LKISDFGMSRQEDDGIYSSSGLKQIP  157 (250)
T ss_pred             HHHHHHhCCeeecccChheEEEcCCCe---------------------------EEECCCccceeccccccccCCCCCCc
Confidence            588999999999999999999965444                           5556666554322111    111335


Q ss_pred             CCcccchhhhcCCCCccchhHhHHHHHHHHHh-CCCCCCCCCh
Q 025467           77 RHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHEN  118 (252)
Q Consensus        77 ~~y~aPE~l~~~~~~~~~Diws~G~~l~~l~~-g~~pf~~~~~  118 (252)
                      ..|+|||++.+..++.++|+||+||++|++++ |..||.+...
T Consensus       158 ~~y~aPE~~~~~~~~~~~Di~slG~ll~~~~~~g~~p~~~~~~  200 (250)
T cd05085         158 IKWTAPEALNYGRYSSESDVWSYGILLWETFSLGVCPYPGMTN  200 (250)
T ss_pred             ccccCHHHhccCCCCchhHHHHHHHHHHHHhcCCCCCCCCCCH
Confidence            57999999988888999999999999999998 9999976544

Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c

>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=99.90  E-value=8.9e-24  Score=169.88  Aligned_cols=95  Identities=25%  Similarity=0.326  Sum_probs=72.9

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCCCccccCCCcc
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYR   80 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~~~~~~t~~y~   80 (252)
                      ||+|||++||+||||||+||+++.++..                    ......++++|||.+..... .....++..|+
T Consensus       113 ~l~~LH~~~i~H~dlkp~Nill~~~~~~--------------------~~~~~~~kl~Dfg~a~~~~~-~~~~~~~~~y~  171 (259)
T cd05037         113 ALHYLEDKKLVHGNVCGKNILVARYGLN--------------------EGYVPFIKLSDPGIPITVLS-REERVERIPWI  171 (259)
T ss_pred             HHHHHhhCCeecccCccceEEEecCccc--------------------cCCceeEEeCCCCccccccc-ccccccCCCcc
Confidence            6899999999999999999999654311                    01223578899998875443 22235667899


Q ss_pred             cchhhhcC--CCCccchhHhHHHHHHHHHh-CCCCCCCC
Q 025467           81 APEVILGL--GWTYPCDIWSVGCILVELCT-GEALFQTH  116 (252)
Q Consensus        81 aPE~l~~~--~~~~~~Diws~G~~l~~l~~-g~~pf~~~  116 (252)
                      |||++.+.  .++.++|+||+||++|++++ |..||...
T Consensus       172 aPE~~~~~~~~~~~~~Di~slG~~~~~l~~~~~~p~~~~  210 (259)
T cd05037         172 APECIRNGQASLTIAADKWSFGTTLLEICSNGEEPLSTL  210 (259)
T ss_pred             ChhhhcCCCCCcchhhHHHHHHHHHHHHHhCCCCCcccC
Confidence            99999876  68899999999999999999 56777544

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki

>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase

Probab=99.90  E-value=1.1e-23  Score=169.80  Aligned_cols=93  Identities=29%  Similarity=0.423  Sum_probs=70.7

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCC----CccccC
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ----NYIVST   76 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~----~~~~~t   76 (252)
                      ||+|||+.|++|+||+|+||+++..+                           .++++|||.+.......    ....++
T Consensus       114 aL~~lH~~~i~H~dl~p~ni~i~~~~---------------------------~~~l~d~~~~~~~~~~~~~~~~~~~~~  166 (260)
T cd05073         114 GMAFIEQRNYIHRDLRAANILVSASL---------------------------VCKIADFGLARVIEDNEYTAREGAKFP  166 (260)
T ss_pred             HHHHHHhCCccccccCcceEEEcCCC---------------------------cEEECCCcceeeccCCCcccccCCccc
Confidence            68999999999999999999995544                           45555555554322111    112345


Q ss_pred             CCcccchhhhcCCCCccchhHhHHHHHHHHHh-CCCCCCCCChHH
Q 025467           77 RHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHENLE  120 (252)
Q Consensus        77 ~~y~aPE~l~~~~~~~~~Diws~G~~l~~l~~-g~~pf~~~~~~~  120 (252)
                      ..|+|||++....++.++|+||+||+++++++ |..||.+.+...
T Consensus       167 ~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~~  211 (260)
T cd05073         167 IKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPE  211 (260)
T ss_pred             ccccCHhHhccCCcCccccchHHHHHHHHHHhcCCCCCCCCCHHH
Confidence            67999999988888999999999999999998 899998655433

Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa

>smart00219 TyrKc Tyrosine kinase, catalytic domain

Probab=99.90  E-value=1.5e-23  Score=168.35  Aligned_cols=93  Identities=29%  Similarity=0.411  Sum_probs=70.9

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCCCc----cccC
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNY----IVST   76 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~~~----~~~t   76 (252)
                      ||+|||+.|++|+||+|+||+++.++                           .++++|||.+.........    ..++
T Consensus       115 ~l~~lh~~~~~h~dl~~~nil~~~~~---------------------------~~~l~dfg~~~~~~~~~~~~~~~~~~~  167 (258)
T smart00219      115 GMEYLESKNFIHRDLAARNCLVGENL---------------------------VVKISDFGLSRDLYDDDYYKKKGGKLP  167 (258)
T ss_pred             HHHHHhcCCeeecccccceEEEccCC---------------------------eEEEcccCCceecccccccccccCCCc
Confidence            68999999999999999999995544                           4566666655433222111    1256


Q ss_pred             CCcccchhhhcCCCCccchhHhHHHHHHHHHh-CCCCCCCCChHH
Q 025467           77 RHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHENLE  120 (252)
Q Consensus        77 ~~y~aPE~l~~~~~~~~~Diws~G~~l~~l~~-g~~pf~~~~~~~  120 (252)
                      ..|+|||.+....++.++|+||+||+++++++ |..||...+...
T Consensus       168 ~~y~~Pe~~~~~~~~~~~Di~slG~i~~~l~~~g~~p~~~~~~~~  212 (258)
T smart00219      168 IRWMAPESLKDGKFTSKSDVWSFGVLLWEIFTLGESPYPGMSNEE  212 (258)
T ss_pred             ccccChHHhccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCHHH
Confidence            78999999977788999999999999999998 788887654433

Phosphotransferases. Tyrosine-specific kinase subfamily.

>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha

Probab=99.90  E-value=9.5e-24  Score=179.91  Aligned_cols=89  Identities=27%  Similarity=0.405  Sum_probs=70.4

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCC-----Ccccc
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ-----NYIVS   75 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~-----~~~~~   75 (252)
                      ||+|||+.+|+||||||+|||++.+                           ..++++|||++.......     ....+
T Consensus       249 aL~~LH~~~ivH~dikp~Nill~~~---------------------------~~~kL~DfGla~~~~~~~~~~~~~~~~~  301 (400)
T cd05105         249 GMEFLASKNCVHRDLAARNVLLAQG---------------------------KIVKICDFGLARDIMHDSNYVSKGSTFL  301 (400)
T ss_pred             HHHHHHhCCeeCCCCChHhEEEeCC---------------------------CEEEEEeCCcceeccccccccccCCcCC
Confidence            6899999999999999999999543                           346677777665332211     11245


Q ss_pred             CCCcccchhhhcCCCCccchhHhHHHHHHHHHh-CCCCCCCC
Q 025467           76 TRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTH  116 (252)
Q Consensus        76 t~~y~aPE~l~~~~~~~~~Diws~G~~l~~l~~-g~~pf~~~  116 (252)
                      +..|+|||.+.+..++.++||||+||++|++++ |..||...
T Consensus       302 ~~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt~g~~P~~~~  343 (400)
T cd05105         302 PVKWMAPESIFDNLYTTLSDVWSYGILLWEIFSLGGTPYPGM  343 (400)
T ss_pred             CcceEChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCccc
Confidence            678999999988889999999999999999997 88998654

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-

>KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]

Probab=99.90  E-value=3.3e-24  Score=187.65  Aligned_cols=136  Identities=22%  Similarity=0.330  Sum_probs=108.2

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCCCccc-----c
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIV-----S   75 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~~~~~-----~   75 (252)
                      ++.||-++.+|||||..+|+||                           ..+..+||.|||+++..-....+.+     -
T Consensus       615 GM~YLs~~~FVHRDLATRNCLV---------------------------ge~l~VKIsDfGLsRdiYssDYYk~~~~t~l  667 (774)
T KOG1026|consen  615 GMEYLSSHHFVHRDLATRNCLV---------------------------GENLVVKISDFGLSRDIYSSDYYKVRGNTLL  667 (774)
T ss_pred             HHHHHHhCcccccchhhhhcee---------------------------ccceEEEecccccchhhhhhhhhcccCCcee
Confidence            4789999999999999999999                           4455677777777764333332222     2


Q ss_pred             CCCcccchhhhcCCCCccchhHhHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHHHHHHhhcCCCC
Q 025467           76 TRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLD  154 (252)
Q Consensus        76 t~~y~aPE~l~~~~~~~~~Diws~G~~l~~l~~-g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~  154 (252)
                      +..||+||.|..+.|+..+|||||||+|||+++ |..|+.+..+.++++.+..-.                      -+.
T Consensus       668 PIRWMppEsIly~kFTteSDVWs~GVvLWEIFsyG~QPy~glSn~EVIe~i~~g~----------------------lL~  725 (774)
T KOG1026|consen  668 PIRWMPPESILYGKFTTESDVWSFGVVLWEIFSYGKQPYYGLSNQEVIECIRAGQ----------------------LLS  725 (774)
T ss_pred             eeecCCHHHhhcCcccchhhhhhhhhhhhhhhccccCcccccchHHHHHHHHcCC----------------------ccc
Confidence            568999999999999999999999999999998 999999999888877543311                      111


Q ss_pred             CCccccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCCCC
Q 025467          155 WPEGAASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRL  234 (252)
Q Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~  234 (252)
                      .                                                       ....+.++++||.+||+.+|.+||
T Consensus       726 ~-------------------------------------------------------Pe~CP~~vY~LM~~CW~~~P~~RP  750 (774)
T KOG1026|consen  726 C-------------------------------------------------------PENCPTEVYSLMLECWNENPKRRP  750 (774)
T ss_pred             C-------------------------------------------------------CCCCCHHHHHHHHHHhhcCcccCC
Confidence            1                                                       234567999999999999999999


Q ss_pred             CHHHHH
Q 025467          235 TAREAL  240 (252)
Q Consensus       235 ta~e~l  240 (252)
                      |++||-
T Consensus       751 sF~eI~  756 (774)
T KOG1026|consen  751 SFKEIH  756 (774)
T ss_pred             CHHHHH
Confidence            999983

>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=99.90  E-value=8.8e-24  Score=172.49  Aligned_cols=87  Identities=29%  Similarity=0.370  Sum_probs=66.5

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCC------Cccc
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ------NYIV   74 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~------~~~~   74 (252)
                      ||+|||+.||+||||||+||+++.++.+                           +|+|||.+.......      ....
T Consensus       121 aL~~lH~~gi~H~dlkp~Nil~~~~~~~---------------------------~l~dfg~~~~~~~~~~~~~~~~~~~  173 (284)
T cd05079         121 GMDYLGSRQYVHRDLAARNVLVESEHQV---------------------------KIGDFGLTKAIETDKEYYTVKDDLD  173 (284)
T ss_pred             HHHHHHHCCeeecccchheEEEcCCCCE---------------------------EECCCccccccccCccceeecCCCC
Confidence            6899999999999999999999665544                           555555443321111      1234


Q ss_pred             cCCCcccchhhhcCCCCccchhHhHHHHHHHHHhCCCCCC
Q 025467           75 STRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQ  114 (252)
Q Consensus        75 ~t~~y~aPE~l~~~~~~~~~Diws~G~~l~~l~~g~~pf~  114 (252)
                      ++..|+|||++.+..++.++||||+||++|++++++.|..
T Consensus       174 ~~~~y~apE~~~~~~~~~~~Di~slG~il~ellt~~~~~~  213 (284)
T cd05079         174 SPVFWYAPECLIQSKFYIASDVWSFGVTLYELLTYCDSES  213 (284)
T ss_pred             CCccccCHHHhccCCCCccccchhhhhhhhhhhcCCCCCc
Confidence            5667999999988888999999999999999999876643

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a

>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases

Probab=99.90  E-value=1.6e-23  Score=169.54  Aligned_cols=94  Identities=23%  Similarity=0.361  Sum_probs=69.2

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCC-----CCcccc
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD-----QNYIVS   75 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~-----~~~~~~   75 (252)
                      ||+|||++||+||||||+|||++.++                           .++++|||.+......     .....+
T Consensus       112 ~l~~lH~~~ivH~dlkp~Nill~~~~---------------------------~~kl~dfg~~~~~~~~~~~~~~~~~~~  164 (269)
T cd05042         112 GLLWLHQADFIHSDLALRNCQLTADL---------------------------SVKIGDYGLALEQYPEDYYITKDCHAV  164 (269)
T ss_pred             HHHHHHhcCEecccccHhheEecCCC---------------------------cEEEeccccccccccchheeccCCCCC
Confidence            58999999999999999999995544                           4566666665432111     112245


Q ss_pred             CCCcccchhhhc-------CCCCccchhHhHHHHHHHHHh-CCCCCCCCChHHH
Q 025467           76 TRHYRAPEVILG-------LGWTYPCDIWSVGCILVELCT-GEALFQTHENLEH  121 (252)
Q Consensus        76 t~~y~aPE~l~~-------~~~~~~~Diws~G~~l~~l~~-g~~pf~~~~~~~~  121 (252)
                      +..|+|||++..       ..++.++||||+||++|++++ |..||....+.+.
T Consensus       165 ~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~  218 (269)
T cd05042         165 PLRWLAPELVEIRGQDLLPKDQTKKSNIWSLGVTMWELFTAADQPYPDLSDEQV  218 (269)
T ss_pred             cccccCHHHHhhccccccccccchhhHHHHHHHHHHHHHhCCCCCCCcCCHHHH
Confidence            667999999753       346789999999999999999 7788876554443

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina

>PLN03224 probable serine/threonine protein kinase; Provisional

Probab=99.90  E-value=2.1e-23  Score=180.57  Aligned_cols=87  Identities=25%  Similarity=0.477  Sum_probs=63.7

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCC----CccccC
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ----NYIVST   76 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~----~~~~~t   76 (252)
                      ||+|||+++|+||||||+|||++.                           ...++|+|||++.......    ....++
T Consensus       321 aL~~lH~~~ivHrDLKp~NILl~~---------------------------~~~~kL~DFGla~~~~~~~~~~~~~g~~t  373 (507)
T PLN03224        321 GLRKLHRIGIVHRDIKPENLLVTV---------------------------DGQVKIIDFGAAVDMCTGINFNPLYGMLD  373 (507)
T ss_pred             HHHHHHHCCeecCCCchHhEEECC---------------------------CCcEEEEeCcCccccccCCccCccccCCC
Confidence            588999999999999999999944                           3456777777765432211    112347


Q ss_pred             CCcccchhhhcCC--------------------CC--ccchhHhHHHHHHHHHhCCC-CCC
Q 025467           77 RHYRAPEVILGLG--------------------WT--YPCDIWSVGCILVELCTGEA-LFQ  114 (252)
Q Consensus        77 ~~y~aPE~l~~~~--------------------~~--~~~Diws~G~~l~~l~~g~~-pf~  114 (252)
                      +.|+|||.+....                    |.  ...|+||+||++++|+++.. ||.
T Consensus       374 p~Y~aPE~l~~~~~~~~~~~~~~~~~l~~~~~~yg~~~~~DvwSlGvil~em~~~~l~p~~  434 (507)
T PLN03224        374 PRYSPPEELVMPQSCPRAPAPAMAALLSPFAWLYGRPDLFDSYTAGVLLMQMCVPELRPVA  434 (507)
T ss_pred             cceeChhhhcCCCCCCccchhhhhhhhhhhHHhcCCCCccchhhHHHHHHHHHhCCCCCcc
Confidence            8899999885321                    11  24699999999999999874 664

>PRK13184 pknD serine/threonine-protein kinase; Reviewed

Probab=99.90  E-value=1.1e-23  Score=191.04  Aligned_cols=110  Identities=25%  Similarity=0.337  Sum_probs=76.6

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCCCccccCCCcc
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYR   80 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~~~~~~t~~y~   80 (252)
                      ||+|||++||+||||||+|||++.++.+++.|||++............      .....-+............+||+.|+
T Consensus       125 AL~yLHs~GIIHRDLKPeNILLd~dg~vKLiDFGLAk~i~~~~~~~~~------l~~~~~~s~~s~~t~~g~~vGT~~Ym  198 (932)
T PRK13184        125 TIEYVHSKGVLHRDLKPDNILLGLFGEVVILDWGAAIFKKLEEEDLLD------IDVDERNICYSSMTIPGKIVGTPDYM  198 (932)
T ss_pred             HHHHHHHCCccccCCchheEEEcCCCCEEEEecCcceecccccccccc------cccccccccccccccCCCCCCCCCCC
Confidence            689999999999999999999987777777777776543211110000      00000000000001112246899999


Q ss_pred             cchhhhcCCCCccchhHhHHHHHHHHHhCCCCCCCC
Q 025467           81 APEVILGLGWTYPCDIWSVGCILVELCTGEALFQTH  116 (252)
Q Consensus        81 aPE~l~~~~~~~~~Diws~G~~l~~l~~g~~pf~~~  116 (252)
                      |||.+.+..++.++||||+||++|+|++|..||...
T Consensus       199 APE~l~g~~~S~kSDIWSLGVILyELLTG~~PF~~~  234 (932)
T PRK13184        199 APERLLGVPASESTDIYALGVILYQMLTLSFPYRRK  234 (932)
T ss_pred             CHHHhcCCCCCcHhHHHHHHHHHHHHHHCCCCCCCc
Confidence            999999888999999999999999999999999763

>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3

Probab=99.90  E-value=1.2e-23  Score=170.46  Aligned_cols=91  Identities=23%  Similarity=0.317  Sum_probs=70.0

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCC-----Ccccc
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ-----NYIVS   75 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~-----~~~~~   75 (252)
                      ||+|||+.||+||||||+||+++.+.                           .++++|||.+.......     ....+
T Consensus       125 ~l~~lH~~~i~H~dikp~nili~~~~---------------------------~~kl~dfg~~~~~~~~~~~~~~~~~~~  177 (273)
T cd05074         125 GMEYLSSKNFIHRDLAARNCMLNENM---------------------------TVCVADFGLSKKIYSGDYYRQGCASKL  177 (273)
T ss_pred             HHHHHHhCCEeecccchhhEEEcCCC---------------------------CEEECcccccccccCCcceecCCCccC
Confidence            68999999999999999999995544                           45566666554332111     11234


Q ss_pred             CCCcccchhhhcCCCCccchhHhHHHHHHHHHh-CCCCCCCCCh
Q 025467           76 TRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHEN  118 (252)
Q Consensus        76 t~~y~aPE~l~~~~~~~~~Diws~G~~l~~l~~-g~~pf~~~~~  118 (252)
                      +..|++||.+....++.++||||+||++|++++ |..||.+.+.
T Consensus       178 ~~~~~~pe~~~~~~~~~~sDi~slG~il~el~~~g~~p~~~~~~  221 (273)
T cd05074         178 PVKWLALESLADNVYTTHSDVWAFGVTMWEIMTRGQTPYAGVEN  221 (273)
T ss_pred             chhhcCHhHHhcCccchhhhhHHHHHHHHHHhhCCCCCCCCCCH
Confidence            567999999988888999999999999999999 8899876544

Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac

>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain

Probab=99.90  E-value=1.8e-23  Score=165.84  Aligned_cols=144  Identities=39%  Similarity=0.615  Sum_probs=105.4

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCC--CCccccCCC
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD--QNYIVSTRH   78 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~--~~~~~~t~~   78 (252)
                      ||.+||+.+++|+||+|.||+++.                           .+.++++|||.+......  .....++..
T Consensus        99 ~l~~lh~~~i~h~~i~~~ni~~~~---------------------------~~~~~l~d~~~~~~~~~~~~~~~~~~~~~  151 (244)
T smart00220       99 ALEYLHSNGIIHRDLKPENILLDE---------------------------DGHVKLADFGLARQLDPGGLLTTFVGTPE  151 (244)
T ss_pred             HHHHHHHcCeecCCcCHHHeEECC---------------------------CCcEEEccccceeeeccccccccccCCcC
Confidence            578999999999999999999954                           345677777776554332  223467788


Q ss_pred             cccchhhhcCCCCccchhHhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHHHHHHhhcCCCCCCcc
Q 025467           79 YRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEG  158 (252)
Q Consensus        79 y~aPE~l~~~~~~~~~Diws~G~~l~~l~~g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~  158 (252)
                      |++||.+....++.++|+|++|++++++++|..||....+.........                      .+...... 
T Consensus       152 ~~~pE~~~~~~~~~~~Di~slG~~l~~l~~~~~p~~~~~~~~~~~~~~~----------------------~~~~~~~~-  208 (244)
T smart00220      152 YMAPEVLLGKGYGKAVDVWSLGVILYELLTGKPPFPGDDQLLELFKKIG----------------------KPKPPFPP-  208 (244)
T ss_pred             CCCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHh----------------------ccCCCCcc-
Confidence            9999999887888999999999999999999999976333222211111                      00000000 


Q ss_pred             ccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCCCCCHHH
Q 025467          159 AASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTARE  238 (252)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~ta~e  238 (252)
                                                                         .....+..+.+++.+||..+|++|||+.+
T Consensus       209 ---------------------------------------------------~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~  237 (244)
T smart00220      209 ---------------------------------------------------PEWKISPEAKDLIRKLLVKDPEKRLTAEE  237 (244)
T ss_pred             ---------------------------------------------------ccccCCHHHHHHHHHHccCCchhccCHHH
Confidence                                                               00013458899999999999999999999


Q ss_pred             HHcCCCC
Q 025467          239 ALRHPFF  245 (252)
Q Consensus       239 ~l~hpwf  245 (252)
                      +++||||
T Consensus       238 ~~~~~~~  244 (244)
T smart00220      238 ALQHPFF  244 (244)
T ss_pred             HhhCCCC
Confidence            9999997

Phosphotransferases. Serine or threonine-specific kinase subfamily.

>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7

Probab=99.90  E-value=3.2e-23  Score=167.39  Aligned_cols=89  Identities=30%  Similarity=0.596  Sum_probs=70.8

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCC---CccccCC
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ---NYIVSTR   77 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~---~~~~~t~   77 (252)
                      ||+|||+.||+||||+|+||+++.++                           .++++|||.+.......   ....++.
T Consensus       118 ~l~~lh~~~i~h~dl~p~nil~~~~~---------------------------~~~l~d~~~~~~~~~~~~~~~~~~~~~  170 (267)
T cd08224         118 ALEHMHSKRIMHRDIKPANVFITATG---------------------------VVKLGDLGLGRFFSSKTTAAHSLVGTP  170 (267)
T ss_pred             HHHHHHhCCEecCCcChhhEEECCCC---------------------------cEEEeccceeeeccCCCcccceecCCc
Confidence            58999999999999999999995444                           45666666654322211   1235778


Q ss_pred             CcccchhhhcCCCCccchhHhHHHHHHHHHhCCCCCCCC
Q 025467           78 HYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTH  116 (252)
Q Consensus        78 ~y~aPE~l~~~~~~~~~Diws~G~~l~~l~~g~~pf~~~  116 (252)
                      .|+|||.+.+..++.++|+||+||++|++++|..||...
T Consensus       171 ~y~apE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~  209 (267)
T cd08224         171 YYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGD  209 (267)
T ss_pred             cccCHHHhccCCCCchhcHHHHHHHHHHHHHCCCCcccC
Confidence            899999998888999999999999999999999998654

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a

>KOG0586 consensus Serine/threonine protein kinase [General function prediction only]

Probab=99.90  E-value=2e-24  Score=182.92  Aligned_cols=143  Identities=27%  Similarity=0.402  Sum_probs=110.5

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCC--CCccccCCC
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD--QNYIVSTRH   78 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~--~~~~~~t~~   78 (252)
                      |++|||+++|||||||++|||+                           +.+..+||+|||++......  ....+|++.
T Consensus       167 aveYcH~k~ivHrdLk~eNilL---------------------------~~~mnikIaDfgfS~~~~~~~~lqt~cgspp  219 (596)
T KOG0586|consen  167 AVEYCHSKNIVHRDLKAENILL---------------------------DENMNIKIADFGFSTFFDYGLMLQTFCGSPP  219 (596)
T ss_pred             HHHHHhhcceeccccchhhccc---------------------------ccccceeeeccccceeecccccccccCCCCC
Confidence            6899999999999999999999                           44556888898888654332  334689999


Q ss_pred             cccchhhhcCCC-CccchhHhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHHHHHHhhcCCCCCCc
Q 025467           79 YRAPEVILGLGW-TYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPE  157 (252)
Q Consensus        79 y~aPE~l~~~~~-~~~~Diws~G~~l~~l~~g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~  157 (252)
                      |.|||+..+..| ++.+|+||+|+++|.++.|..||.+.+-...-.+                       +..+.+..  
T Consensus       220 yAaPEl~~g~~y~gpe~D~Wslgvvly~LV~GsLPFDG~~lk~Lr~r-----------------------vl~gk~rI--  274 (596)
T KOG0586|consen  220 YAAPELFNGKKYDGPEVDIWSLGVVLYALVEGSLPFDGQNLKELRPR-----------------------VLRGKYRI--  274 (596)
T ss_pred             ccChHhhcCcccCCcceehhhhhhhheeeeecccccCCcccccccch-----------------------heeeeecc--
Confidence            999999999887 5889999999999999999999987542111000                       00111110  


Q ss_pred             cccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCCCCCHH
Q 025467          158 GAASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAR  237 (252)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~ta~  237 (252)
                                                                           ..-++.+..+||+++|..+|.+|++.+
T Consensus       275 -----------------------------------------------------p~~ms~dce~lLrk~lvl~Pskr~~~d  301 (596)
T KOG0586|consen  275 -----------------------------------------------------PFYMSCDCEDLLRKFLVLNPSKRGPCD  301 (596)
T ss_pred             -----------------------------------------------------cceeechhHHHHHHhhccCccccCCHH
Confidence                                                                 112345788999999999999999999


Q ss_pred             HHHcCCCCCCc
Q 025467          238 EALRHPFFTRD  248 (252)
Q Consensus       238 e~l~hpwf~~~  248 (252)
                      +++.|.|+...
T Consensus       302 qim~~~W~n~~  312 (596)
T KOG0586|consen  302 QIMKDRWRNDL  312 (596)
T ss_pred             Hhhhhcccchh
Confidence            99999998764

>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3

Probab=99.89  E-value=3.4e-23  Score=167.68  Aligned_cols=92  Identities=23%  Similarity=0.394  Sum_probs=68.4

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCC-----CCcccc
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD-----QNYIVS   75 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~-----~~~~~~   75 (252)
                      ||+|||+.|++||||||+||+++.++                           .++++|||.+......     .....+
T Consensus       112 al~~lH~~~i~H~dlkp~nil~~~~~---------------------------~~kL~dfg~~~~~~~~~~~~~~~~~~~  164 (269)
T cd05087         112 GLLHLHKNNFIHSDLALRNCLLTADL---------------------------TVKIGDYGLSHNKYKEDYYVTPDQLWV  164 (269)
T ss_pred             HHHHHHHCCEeccccCcceEEEcCCC---------------------------cEEECCccccccccCcceeecCCCcCC
Confidence            68999999999999999999995544                           4566666655432111     112345


Q ss_pred             CCCcccchhhhcC-------CCCccchhHhHHHHHHHHHh-CCCCCCCCChH
Q 025467           76 TRHYRAPEVILGL-------GWTYPCDIWSVGCILVELCT-GEALFQTHENL  119 (252)
Q Consensus        76 t~~y~aPE~l~~~-------~~~~~~Diws~G~~l~~l~~-g~~pf~~~~~~  119 (252)
                      +..|+|||++...       .++.++|+||+||++|++++ |..||......
T Consensus       165 ~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~  216 (269)
T cd05087         165 PLRWIAPELVDEVHGNLLVVDQTKESNVWSLGVTIWELFELGSQPYRHLSDE  216 (269)
T ss_pred             cccccCHhHhccccccccccCCCccchhHHHHHHHHHHHhCCCCCCCCCChH
Confidence            7789999998642       35789999999999999996 99999765443

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells

>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta

Probab=99.89  E-value=3.9e-23  Score=176.09  Aligned_cols=90  Identities=27%  Similarity=0.412  Sum_probs=70.3

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCC-----CCcccc
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD-----QNYIVS   75 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~-----~~~~~~   75 (252)
                      ||+|||+.+|+||||||+|||++..+                           .++++|||+++.....     .....+
T Consensus       251 aL~~LH~~~ivHrdlkp~NiLl~~~~---------------------------~~kL~DfGla~~~~~~~~~~~~~~~~~  303 (401)
T cd05107         251 GMEFLASKNCVHRDLAARNVLICEGK---------------------------LVKICDFGLARDIMRDSNYISKGSTFL  303 (401)
T ss_pred             HHHHHhcCCcCcccCCcceEEEeCCC---------------------------EEEEEecCcceecccccccccCCCcCC
Confidence            68999999999999999999995443                           4566666666432111     111245


Q ss_pred             CCCcccchhhhcCCCCccchhHhHHHHHHHHHh-CCCCCCCCC
Q 025467           76 TRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHE  117 (252)
Q Consensus        76 t~~y~aPE~l~~~~~~~~~Diws~G~~l~~l~~-g~~pf~~~~  117 (252)
                      +..|+|||.+.+..++.++|+||+||++|++++ |..||....
T Consensus       304 ~~~y~aPE~~~~~~~~~~~DvwslGvil~e~l~~g~~P~~~~~  346 (401)
T cd05107         304 PLKWMAPESIFNNLYTTLSDVWSFGILLWEIFTLGGTPYPELP  346 (401)
T ss_pred             CCceeChHHhcCCCCCcHhHHHHHHHHHHHHHHcCCCCCCCCC
Confidence            678999999988888999999999999999998 888986544

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D

>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2

Probab=99.89  E-value=5.2e-23  Score=166.62  Aligned_cols=94  Identities=24%  Similarity=0.359  Sum_probs=68.7

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCC-----CCCcccc
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERP-----DQNYIVS   75 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~-----~~~~~~~   75 (252)
                      ||+|||+++|+||||||+|||++.+                           ..++++|||.+.....     ......+
T Consensus       111 al~~lH~~~i~H~dikp~nil~~~~---------------------------~~~~l~Dfg~~~~~~~~~~~~~~~~~~~  163 (268)
T cd05086         111 GVTHMHKHNFLHSDLALRNCFLTSD---------------------------LTVKVGDYGIGPSRYKEDYIETEDDKCV  163 (268)
T ss_pred             HHHHHHHCCeeccCCccceEEEcCC---------------------------ccEEecccccccccCcchhhhcccCCcC
Confidence            6899999999999999999999544                           4466667666543211     1122357


Q ss_pred             CCCcccchhhhc-------CCCCccchhHhHHHHHHHHHh-CCCCCCCCChHHH
Q 025467           76 TRHYRAPEVILG-------LGWTYPCDIWSVGCILVELCT-GEALFQTHENLEH  121 (252)
Q Consensus        76 t~~y~aPE~l~~-------~~~~~~~Diws~G~~l~~l~~-g~~pf~~~~~~~~  121 (252)
                      +..|+|||++..       ..++.++||||+||++|+|++ +..||...++.+.
T Consensus       164 ~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~  217 (268)
T cd05086         164 PLRWLAPELVGEFHGGLITAEQTKPSNVWALGVTLWELFENAAQPYSHLSDREV  217 (268)
T ss_pred             cccccCchhcccccCccccCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCHHHH
Confidence            788999999753       235678999999999999987 5678876554433

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage

>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4

Probab=99.89  E-value=3e-23  Score=168.47  Aligned_cols=91  Identities=22%  Similarity=0.319  Sum_probs=68.7

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCC----CCccccC
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD----QNYIVST   76 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~----~~~~~~t   76 (252)
                      ||+|||+.||+||||||+||+++.++.                           +++.|||.+......    .....++
T Consensus       129 ~l~~LH~~~i~H~dlkp~Nili~~~~~---------------------------~~l~~~~~~~~~~~~~~~~~~~~~~~  181 (275)
T cd05046         129 GMDHLSNARFVHRDLAARNCLVSSQRE---------------------------VKVSLLSLSKDVYNSEYYKLRNALIP  181 (275)
T ss_pred             HHHHhhhcCcccCcCccceEEEeCCCc---------------------------EEEcccccccccCcccccccCCceeE
Confidence            689999999999999999999965544                           455555554322111    1112456


Q ss_pred             CCcccchhhhcCCCCccchhHhHHHHHHHHHh-CCCCCCCCCh
Q 025467           77 RHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHEN  118 (252)
Q Consensus        77 ~~y~aPE~l~~~~~~~~~Diws~G~~l~~l~~-g~~pf~~~~~  118 (252)
                      ..|+|||.+.+..++.++|+||+||+++++++ |..||.....
T Consensus       182 ~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~~~~~p~~~~~~  224 (275)
T cd05046         182 LRWLAPEAVQEDDFSTKSDVWSFGVLMWEVFTQGELPFYGLSD  224 (275)
T ss_pred             EeecChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCccccch
Confidence            67999999988788899999999999999998 7788865443

Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s

>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases

Probab=99.89  E-value=4.8e-23  Score=167.67  Aligned_cols=91  Identities=26%  Similarity=0.372  Sum_probs=69.7

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCCC-----cccc
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQN-----YIVS   75 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~~-----~~~~   75 (252)
                      ||+|||++||+||||||+||++..++.                           ++|+|||.+........     ...+
T Consensus       121 ~l~~LH~~~i~H~di~p~nil~~~~~~---------------------------~kL~dfg~~~~~~~~~~~~~~~~~~~  173 (279)
T cd05057         121 GMSYLEEKRLVHRDLAARNVLVKTPQH---------------------------VKITDFGLAKLLDVDEKEYHAEGGKV  173 (279)
T ss_pred             HHHHHHhCCEEecccCcceEEEcCCCe---------------------------EEECCCcccccccCcccceecCCCcc
Confidence            689999999999999999999955444                           55555555543222111     1123


Q ss_pred             CCCcccchhhhcCCCCccchhHhHHHHHHHHHh-CCCCCCCCCh
Q 025467           76 TRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHEN  118 (252)
Q Consensus        76 t~~y~aPE~l~~~~~~~~~Diws~G~~l~~l~~-g~~pf~~~~~  118 (252)
                      +..|+|||.+....++.++|+||+||+++++++ |..||.+...
T Consensus       174 ~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~  217 (279)
T cd05057         174 PIKWMALESILHRIYTHKSDVWSYGVTVWELMTFGAKPYEGIPA  217 (279)
T ss_pred             cccccCHHHhhcCCcCchhhHHHHHHHHHHHhcCCCCCCCCCCH
Confidence            457999999988888999999999999999998 9999976543

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea

>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10

Probab=99.89  E-value=5.9e-23  Score=166.18  Aligned_cols=90  Identities=28%  Similarity=0.635  Sum_probs=72.1

Q ss_pred             Chhhhhc-cCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCC--CccccCC
Q 025467            1 MFAVMHD-LCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ--NYIVSTR   77 (252)
Q Consensus         1 aL~~lH~-~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~--~~~~~t~   77 (252)
                      ||.|||+ .+++|+||+|+||++..+                           ..+++.|||.+.......  ....++.
T Consensus       125 ~l~~lh~~~~i~H~dl~~~nil~~~~---------------------------~~~~l~dfg~~~~~~~~~~~~~~~~~~  177 (269)
T cd08528         125 ALRYLHKEKRIVHRDLTPNNIMLGED---------------------------DKVTITDFGLAKQKQPESKLTSVVGTI  177 (269)
T ss_pred             HHHHhccCCceeecCCCHHHEEECCC---------------------------CcEEEecccceeecccccccccccCcc
Confidence            5889996 789999999999999543                           456777777665433221  2245788


Q ss_pred             CcccchhhhcCCCCccchhHhHHHHHHHHHhCCCCCCCCC
Q 025467           78 HYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHE  117 (252)
Q Consensus        78 ~y~aPE~l~~~~~~~~~Diws~G~~l~~l~~g~~pf~~~~  117 (252)
                      .|++||.+.+..++.++|+||+|+++|++++|..||....
T Consensus       178 ~~~~Pe~~~~~~~~~~~Dv~slG~ll~~l~~g~~p~~~~~  217 (269)
T cd08528         178 LYSCPEIVKNEPYGEKADVWAFGCILYQMCTLQPPFYSTN  217 (269)
T ss_pred             cCcChhhhcCCCCchHHHHHHHHHHHHHHHhCCCcccccC
Confidence            8999999988888999999999999999999999997544

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.

>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=99.89  E-value=4.6e-23  Score=168.16  Aligned_cols=87  Identities=28%  Similarity=0.354  Sum_probs=65.6

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCCC------ccc
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQN------YIV   74 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~~------~~~   74 (252)
                      ||+|||++||+||||||+||+++.++.                           ++|+|||.+........      ...
T Consensus       120 aL~~LH~~~i~H~dlkp~nili~~~~~---------------------------~~l~dfg~~~~~~~~~~~~~~~~~~~  172 (284)
T cd05081         120 GMEYLGSKRYVHRDLATRNILVESENR---------------------------VKIGDFGLTKVLPQDKEYYKVREPGE  172 (284)
T ss_pred             HHHHHHHCCceeccCCHhhEEECCCCe---------------------------EEECCCcccccccCCCcceeecCCCC
Confidence            689999999999999999999965554                           45555555443221111      112


Q ss_pred             cCCCcccchhhhcCCCCccchhHhHHHHHHHHHhCCCCCC
Q 025467           75 STRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQ  114 (252)
Q Consensus        75 ~t~~y~aPE~l~~~~~~~~~Diws~G~~l~~l~~g~~pf~  114 (252)
                      ++..|+|||.+.+..++.++|+||+||+++++++|..++.
T Consensus       173 ~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~  212 (284)
T cd05081         173 SPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYSDKSC  212 (284)
T ss_pred             CceEeeCHHHhccCCcChHHHHHHHHHHHHHHhhcCCcCC
Confidence            3446999999988889999999999999999999877654

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th

>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors

Probab=99.89  E-value=4.9e-23  Score=166.58  Aligned_cols=91  Identities=29%  Similarity=0.404  Sum_probs=68.9

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCCC------ccc
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQN------YIV   74 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~~------~~~   74 (252)
                      ||+|||+.|++||||||+||+++.++                           .++++|||.+........      ...
T Consensus       118 ~l~~lH~~~i~h~dlkp~nili~~~~---------------------------~~~l~dfg~~~~~~~~~~~~~~~~~~~  170 (267)
T cd05066         118 GMKYLSDMGYVHRDLAARNILVNSNL---------------------------VCKVSDFGLSRVLEDDPEAAYTTRGGK  170 (267)
T ss_pred             HHHHHHHCCEeehhhchhcEEECCCC---------------------------eEEeCCCCcccccccccceeeecCCCc
Confidence            68999999999999999999995544                           455555555543222111      112


Q ss_pred             cCCCcccchhhhcCCCCccchhHhHHHHHHHHHh-CCCCCCCCCh
Q 025467           75 STRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHEN  118 (252)
Q Consensus        75 ~t~~y~aPE~l~~~~~~~~~Diws~G~~l~~l~~-g~~pf~~~~~  118 (252)
                      ++..|++||.+.+..++.++|+||+||+++++++ |..||.....
T Consensus       171 ~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~ell~~g~~p~~~~~~  215 (267)
T cd05066         171 IPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWEMSN  215 (267)
T ss_pred             cceeecCHhHhccCccCchhhhHHHHHHHHHHhcCCCCCcccCCH
Confidence            3457999999988889999999999999999886 9999976544

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul

>KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms]

Probab=99.89  E-value=4.8e-24  Score=180.95  Aligned_cols=137  Identities=26%  Similarity=0.382  Sum_probs=108.6

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCCCcc--c--cC
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYI--V--ST   76 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~~~~--~--~t   76 (252)
                      ||+|||+.+.|||||..+|||++.                           ..++|++|||++++......+.  .  -+
T Consensus       503 alaYLeSkrfVHRDIAaRNiLVsS---------------------------p~CVKLaDFGLSR~~ed~~yYkaS~~kLP  555 (974)
T KOG4257|consen  503 ALAYLESKRFVHRDIAARNILVSS---------------------------PQCVKLADFGLSRYLEDDAYYKASRGKLP  555 (974)
T ss_pred             HHHHHHhhchhhhhhhhhheeecC---------------------------cceeeecccchhhhccccchhhccccccc
Confidence            689999999999999999999954                           3467888888888766554331  2  24


Q ss_pred             CCcccchhhhcCCCCccchhHhHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHHHHHHhhcCCCCC
Q 025467           77 RHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDW  155 (252)
Q Consensus        77 ~~y~aPE~l~~~~~~~~~Diws~G~~l~~l~~-g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~  155 (252)
                      .-|||||.+....|+.++|+|.|||++|++++ |..||.+..+.+++..+..-.                      +++.
T Consensus       556 IKWmaPESINfRrFTtASDVWMFgVCmWEIl~lGvkPfqgvkNsDVI~~iEnGe----------------------RlP~  613 (974)
T KOG4257|consen  556 IKWMAPESINFRRFTTASDVWMFGVCMWEILSLGVKPFQGVKNSDVIGHIENGE----------------------RLPC  613 (974)
T ss_pred             eeecCccccchhcccchhhHHHHHHHHHHHHHhcCCccccccccceEEEecCCC----------------------CCCC
Confidence            57999999999999999999999999999977 999999988777665432211                      1111


Q ss_pred             CccccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCCCCC
Q 025467          156 PEGAASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLT  235 (252)
Q Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~t  235 (252)
                                                                             ++..++.++.|+.+||.++|.+||+
T Consensus       614 -------------------------------------------------------P~nCPp~LYslmskcWayeP~kRPr  638 (974)
T KOG4257|consen  614 -------------------------------------------------------PPNCPPALYSLMSKCWAYEPSKRPR  638 (974)
T ss_pred             -------------------------------------------------------CCCCChHHHHHHHHHhccCcccCCc
Confidence                                                                   2345678899999999999999999


Q ss_pred             HHHHHc
Q 025467          236 AREALR  241 (252)
Q Consensus       236 a~e~l~  241 (252)
                      +.++..
T Consensus       639 ftei~~  644 (974)
T KOG4257|consen  639 FTEIKA  644 (974)
T ss_pred             HHHHHH
Confidence            988754

>KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.89  E-value=4.7e-23  Score=163.86  Aligned_cols=87  Identities=29%  Similarity=0.552  Sum_probs=77.0

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCC---CCCccccCC
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERP---DQNYIVSTR   77 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~---~~~~~~~t~   77 (252)
                      ||.|||+.||++||||..|+|+                           +..+++|++|+|+.+....   .....+||+
T Consensus       363 al~flh~rgiiyrdlkldnvll---------------------------daeghikltdygmcke~l~~gd~tstfcgtp  415 (593)
T KOG0695|consen  363 ALNFLHERGIIYRDLKLDNVLL---------------------------DAEGHIKLTDYGMCKEGLGPGDTTSTFCGTP  415 (593)
T ss_pred             HHHHHhhcCeeeeeccccceEE---------------------------ccCCceeecccchhhcCCCCCcccccccCCC
Confidence            7899999999999999999999                           5666788888888765433   233469999


Q ss_pred             CcccchhhhcCCCCccchhHhHHHHHHHHHhCCCCCC
Q 025467           78 HYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQ  114 (252)
Q Consensus        78 ~y~aPE~l~~~~~~~~~Diws~G~~l~~l~~g~~pf~  114 (252)
                      .|.|||.+.+..|+...|.|++||++++|+.|+.||.
T Consensus       416 nyiapeilrgeeygfsvdwwalgvlmfemmagrspfd  452 (593)
T KOG0695|consen  416 NYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFD  452 (593)
T ss_pred             cccchhhhcccccCceehHHHHHHHHHHHHcCCCCcc
Confidence            9999999999999999999999999999999999995

>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity

Probab=99.89  E-value=1.3e-23  Score=169.43  Aligned_cols=96  Identities=30%  Similarity=0.441  Sum_probs=72.1

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCC-----Ccccc
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ-----NYIVS   75 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~-----~~~~~   75 (252)
                      ||+|||+.+++|++|+++||+++.++                           .+||+|||++.......     .....
T Consensus       115 ~l~~Lh~~~iiH~~l~~~nill~~~~---------------------------~~Kl~~f~~~~~~~~~~~~~~~~~~~~  167 (259)
T PF07714_consen  115 ALSYLHSNNIIHGNLSPSNILLDSNG---------------------------QVKLSDFGLSRPISEKSKYKNDSSQQL  167 (259)
T ss_dssp             HHHHHHHTTEEEST-SGGGEEEETTT---------------------------EEEEESTTTGEETTTSSSEEESTTSES
T ss_pred             cccccccccccccccccccccccccc---------------------------ccccccccccccccccccccccccccc
Confidence            68999999999999999999995544                           56667776665442111     11245


Q ss_pred             CCCcccchhhhcCCCCccchhHhHHHHHHHHHh-CCCCCCCCChHHHHH
Q 025467           76 TRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHENLEHLA  123 (252)
Q Consensus        76 t~~y~aPE~l~~~~~~~~~Diws~G~~l~~l~~-g~~pf~~~~~~~~~~  123 (252)
                      ...|+|||.+....++.++||||||+++|++++ |..||...+..+...
T Consensus       168 ~~~~~aPE~~~~~~~~~ksDVysfG~~l~ei~~~~~~p~~~~~~~~~~~  216 (259)
T PF07714_consen  168 PLRYLAPEVLKDGEYTKKSDVYSFGMLLYEILTLGKFPFSDYDNEEIIE  216 (259)
T ss_dssp             GGGGS-HHHHHHSEESHHHHHHHHHHHHHHHHTTSSGTTTTSCHHHHHH
T ss_pred             ccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence            667999999998889999999999999999999 779987765544433

Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....

>KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms]

Probab=99.89  E-value=4.1e-23  Score=186.66  Aligned_cols=137  Identities=26%  Similarity=0.403  Sum_probs=105.3

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCCCcc-----cc
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYI-----VS   75 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~~~~-----~~   75 (252)
                      +++||+++++|||||..+|+|++..                           ..+||+|||+|+.......+.     .-
T Consensus       814 G~~YLe~~~fvHRDLAaRNCLL~~~---------------------------r~VKIaDFGlArDiy~~~yyr~~~~a~l  866 (1025)
T KOG1095|consen  814 GMNYLESKHFVHRDLAARNCLLDER---------------------------RVVKIADFGLARDIYDKDYYRKHGEAML  866 (1025)
T ss_pred             hhHHHHhCCCcCcchhhhheeeccc---------------------------CcEEEcccchhHhhhhchheeccCcccc
Confidence            4689999999999999999999554                           456777777776332222111     22


Q ss_pred             CCCcccchhhhcCCCCccchhHhHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHHHHHHhhcCCCC
Q 025467           76 TRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLD  154 (252)
Q Consensus        76 t~~y~aPE~l~~~~~~~~~Diws~G~~l~~l~~-g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~  154 (252)
                      +..|||||++..+.|+.++|||||||++||+++ |..||.+.++.+++....+                      .|++.
T Consensus       867 PvkWm~PEsl~d~iFtskSDvWsFGVllWEifslG~~PY~~~~n~~v~~~~~~----------------------ggRL~  924 (1025)
T KOG1095|consen  867 PVKWMPPESLKDGIFTSKSDVWSFGVLLWEIFSLGATPYPSRSNFEVLLDVLE----------------------GGRLD  924 (1025)
T ss_pred             ceecCCHHHHhhcccccccchhhhHHHHHHHHhCCCCCCCCcchHHHHHHHHh----------------------CCccC
Confidence            457999999999999999999999999999999 8899998887766543221                      22333


Q ss_pred             CCccccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCCCC
Q 025467          155 WPEGAASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRL  234 (252)
Q Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~  234 (252)
                      .|.                                                       ..++.+++||..||+-+|++||
T Consensus       925 ~P~-------------------------------------------------------~CP~~ly~lM~~CW~~~pe~RP  949 (1025)
T KOG1095|consen  925 PPS-------------------------------------------------------YCPEKLYQLMLQCWKHDPEDRP  949 (1025)
T ss_pred             CCC-------------------------------------------------------CCChHHHHHHHHHccCChhhCc
Confidence            332                                                       2345788999999999999999


Q ss_pred             CHHHHHc
Q 025467          235 TAREALR  241 (252)
Q Consensus       235 ta~e~l~  241 (252)
                      ++..+++
T Consensus       950 ~F~~i~~  956 (1025)
T KOG1095|consen  950 SFRTIVE  956 (1025)
T ss_pred             cHHHHHh
Confidence            9999987

>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors

Probab=99.89  E-value=7e-23  Score=165.81  Aligned_cols=92  Identities=27%  Similarity=0.444  Sum_probs=68.6

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCCC------cc-
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQN------YI-   73 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~~------~~-   73 (252)
                      ||+|||++|++|+||||+||+++.++                           .++++|||.+........      .. 
T Consensus       118 al~~lH~~g~~H~dl~p~nili~~~~---------------------------~~kl~dfg~~~~~~~~~~~~~~~~~~~  170 (269)
T cd05065         118 GMKYLSEMNYVHRDLAARNILVNSNL---------------------------VCKVSDFGLSRFLEDDTSDPTYTSSLG  170 (269)
T ss_pred             HHHHHHHCCEeecccChheEEEcCCC---------------------------cEEECCCccccccccCccccccccccC
Confidence            68999999999999999999995544                           455556655433211110      00 


Q ss_pred             -ccCCCcccchhhhcCCCCccchhHhHHHHHHHHHh-CCCCCCCCChH
Q 025467           74 -VSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHENL  119 (252)
Q Consensus        74 -~~t~~y~aPE~l~~~~~~~~~Diws~G~~l~~l~~-g~~pf~~~~~~  119 (252)
                       ..+..|+|||.+.+..++.++|+||+||++|++++ |..||...+..
T Consensus       171 ~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~e~l~~g~~p~~~~~~~  218 (269)
T cd05065         171 GKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQ  218 (269)
T ss_pred             CCcceeecCHhHhccCcccchhhhhhhHHHHHHHhcCCCCCCCCCCHH
Confidence             12346999999988889999999999999999886 99999765543

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr

>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=99.87  E-value=1.1e-22  Score=165.68  Aligned_cols=88  Identities=28%  Similarity=0.365  Sum_probs=68.7

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCCC------ccc
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQN------YIV   74 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~~------~~~   74 (252)
                      ||+|||++|++|+||||+||+++.+                           ..++++|||.+........      ...
T Consensus       121 aL~~lH~~~i~H~dl~p~nil~~~~---------------------------~~~~l~dfg~~~~~~~~~~~~~~~~~~~  173 (284)
T cd05038         121 GMDYLGSQRYIHRDLAARNILVESE---------------------------DLVKISDFGLAKVLPEDKDYYYVKEPGE  173 (284)
T ss_pred             HHHHHHhCCeecCCCCHHhEEEcCC---------------------------CCEEEcccccccccccCCcceeccCCCC
Confidence            6899999999999999999999544                           4456666666554331111      113


Q ss_pred             cCCCcccchhhhcCCCCccchhHhHHHHHHHHHhCCCCCCC
Q 025467           75 STRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQT  115 (252)
Q Consensus        75 ~t~~y~aPE~l~~~~~~~~~Diws~G~~l~~l~~g~~pf~~  115 (252)
                      ++..|++||.+....++.++|+||+||+++++++|..|+..
T Consensus       174 ~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~  214 (284)
T cd05038         174 SPIFWYAPECLRTSKFSSASDVWSFGVTLYELFTYGDPSQS  214 (284)
T ss_pred             CcccccCcHHHccCCCCcccchHHHhhhhheeeccCCCccc
Confidence            34569999999888889999999999999999999988754

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut

>KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms]

Probab=99.87  E-value=2.2e-22  Score=172.76  Aligned_cols=138  Identities=22%  Similarity=0.382  Sum_probs=106.1

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCCCcc------c
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYI------V   74 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~~~~------~   74 (252)
                      ||.||.++++|||||..+|+|+.....                           +||+|||+.+........+      .
T Consensus       224 aM~YLeskrlvHRDLAARNlllasprt---------------------------VKI~DFGLmRaLg~ned~Yvm~p~rk  276 (1039)
T KOG0199|consen  224 AMQYLESKRLVHRDLAARNLLLASPRT---------------------------VKICDFGLMRALGENEDMYVMAPQRK  276 (1039)
T ss_pred             HHHHHhhhhhhhhhhhhhhheecccce---------------------------eeeecccceeccCCCCcceEecCCCc
Confidence            689999999999999999999965544                           5555665555443333221      2


Q ss_pred             cCCCcccchhhhcCCCCccchhHhHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHHHHHHhhcCCC
Q 025467           75 STRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRL  153 (252)
Q Consensus        75 ~t~~y~aPE~l~~~~~~~~~Diws~G~~l~~l~~-g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~  153 (252)
                      -...|+|||.+....|+.++|+|+|||+||||++ |+.|+.|....+++..+..  |                    .++
T Consensus       277 vPfAWCaPEsLrh~kFShaSDvWmyGVTiWEMFtyGEePW~G~~g~qIL~~iD~--~--------------------erL  334 (1039)
T KOG0199|consen  277 VPFAWCAPESLRHRKFSHASDVWMYGVTIWEMFTYGEEPWVGCRGIQILKNIDA--G--------------------ERL  334 (1039)
T ss_pred             CcccccCHhHhccccccccchhhhhhhhHHhhhccCCCCCCCCCHHHHHHhccc--c--------------------ccC
Confidence            2457999999999999999999999999999998 8899999887777665431  1                    112


Q ss_pred             CCCccccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCCC
Q 025467          154 DWPEGAASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDR  233 (252)
Q Consensus       154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R  233 (252)
                      ..|                                                       ...+++++++++.||..+|++|
T Consensus       335 pRP-------------------------------------------------------k~csedIY~imk~cWah~paDR  359 (1039)
T KOG0199|consen  335 PRP-------------------------------------------------------KYCSEDIYQIMKNCWAHNPADR  359 (1039)
T ss_pred             CCC-------------------------------------------------------CCChHHHHHHHHHhccCCcccc
Confidence            222                                                       3356799999999999999999


Q ss_pred             CCHHHHHcC
Q 025467          234 LTAREALRH  242 (252)
Q Consensus       234 ~ta~e~l~h  242 (252)
                      ||+..|.+.
T Consensus       360 ptFsair~~  368 (1039)
T KOG0199|consen  360 PTFSAIRED  368 (1039)
T ss_pred             ccHHHHHHh
Confidence            999998654

>KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms]

Probab=99.86  E-value=1e-22  Score=172.33  Aligned_cols=98  Identities=23%  Similarity=0.358  Sum_probs=75.4

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCC--C-ccccCC
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ--N-YIVSTR   77 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~--~-~~~~t~   77 (252)
                      +|+|||+++++||||.++|+|++.++.                           +||+|||+++....-.  . ..--+.
T Consensus       274 Gl~YLh~k~~IHRDIAARNcL~~~~~~---------------------------vKISDFGLs~~~~~~~~~~~~~klPi  326 (474)
T KOG0194|consen  274 GLEYLHSKNCIHRDIAARNCLYSKKGV---------------------------VKISDFGLSRAGSQYVMKKFLKKLPI  326 (474)
T ss_pred             HHHHHHHCCCcchhHhHHHheecCCCe---------------------------EEeCccccccCCcceeeccccccCcc
Confidence            589999999999999999999966554                           4555555554432110  0 112356


Q ss_pred             CcccchhhhcCCCCccchhHhHHHHHHHHHh-CCCCCCCCChHHHHHHH
Q 025467           78 HYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHENLEHLAMM  125 (252)
Q Consensus        78 ~y~aPE~l~~~~~~~~~Diws~G~~l~~l~~-g~~pf~~~~~~~~~~~~  125 (252)
                      .|+|||.+....|+.++|||||||++||+++ |..||.+....+.-..+
T Consensus       327 rWLAPEtl~~~~~s~kTDV~sfGV~~~Eif~~g~~Py~g~~~~~v~~kI  375 (474)
T KOG0194|consen  327 RWLAPETLNTGIFSFKTDVWSFGVLLWEIFENGAEPYPGMKNYEVKAKI  375 (474)
T ss_pred             eecChhhhccCccccccchhheeeeEEeeeccCCCCCCCCCHHHHHHHH
Confidence            7999999999999999999999999999999 78899988776555544

>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]

Probab=99.86  E-value=7e-23  Score=177.59  Aligned_cols=138  Identities=22%  Similarity=0.322  Sum_probs=111.8

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCCCcc----cc-
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYI----VS-   75 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~~~~----~~-   75 (252)
                      +++||-++|.|||||.++|||+                           +.+..+|+.|||+++.........    .| 
T Consensus       743 GMkYLsdm~YVHRDLAARNILV---------------------------NsnLvCKVsDFGLSRvledd~~~~ytt~GGK  795 (996)
T KOG0196|consen  743 GMKYLSDMNYVHRDLAARNILV---------------------------NSNLVCKVSDFGLSRVLEDDPEAAYTTLGGK  795 (996)
T ss_pred             HhHHHhhcCchhhhhhhhheee---------------------------ccceEEEeccccceeecccCCCccccccCCc
Confidence            5789999999999999999999                           555667777777776554433211    11 


Q ss_pred             -CCCcccchhhhcCCCCccchhHhHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHHHHHHhhcCCC
Q 025467           76 -TRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRL  153 (252)
Q Consensus        76 -t~~y~aPE~l~~~~~~~~~Diws~G~~l~~l~~-g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~  153 (252)
                       +..|+|||.+....++.++|+||+|++|||+++ |..||....+.+++..+++-..-+|+                   
T Consensus       796 IPiRWTAPEAIa~RKFTsASDVWSyGIVmWEVmSyGERPYWdmSNQdVIkaIe~gyRLPpP-------------------  856 (996)
T KOG0196|consen  796 IPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIEQGYRLPPP-------------------  856 (996)
T ss_pred             cceeecChhHhhhcccCchhhccccceEEEEecccCCCcccccchHHHHHHHHhccCCCCC-------------------
Confidence             468999999999999999999999999999877 99999999998988877665543321                   


Q ss_pred             CCCccccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCCC
Q 025467          154 DWPEGAASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDR  233 (252)
Q Consensus       154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R  233 (252)
                                                                                ...+..+..||.-||+.|-.+|
T Consensus       857 ----------------------------------------------------------mDCP~aL~qLMldCWqkdR~~R  878 (996)
T KOG0196|consen  857 ----------------------------------------------------------MDCPAALYQLMLDCWQKDRNRR  878 (996)
T ss_pred             ----------------------------------------------------------CCCcHHHHHHHHHHHHHHhhcC
Confidence                                                                      3345688999999999999999


Q ss_pred             CCHHHHHcC
Q 025467          234 LTAREALRH  242 (252)
Q Consensus       234 ~ta~e~l~h  242 (252)
                      |++.||+.+
T Consensus       879 P~F~qiV~~  887 (996)
T KOG0196|consen  879 PKFAQIVST  887 (996)
T ss_pred             CCHHHHHHH
Confidence            999999863

>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.86  E-value=7.2e-22  Score=165.20  Aligned_cols=88  Identities=33%  Similarity=0.481  Sum_probs=71.9

Q ss_pred             ChhhhhccC---ccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCC-CCCcc---
Q 025467            1 MFAVMHDLC---MIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERP-DQNYI---   73 (252)
Q Consensus         1 aL~~lH~~~---ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~-~~~~~---   73 (252)
                      ||+|||...   |+|||||++|||+                           +.+...||+|||+|+.... .....   
T Consensus       186 gL~yLH~~~~~~iiHrDiKssNILL---------------------------D~~~~aKlsDFGLa~~~~~~~~~~~~~~  238 (361)
T KOG1187|consen  186 GLAYLHEGCPPPIIHRDIKSSNILL---------------------------DEDFNAKLSDFGLAKLGPEGDTSVSTTV  238 (361)
T ss_pred             HHHHHccCCCCCEecCCCCHHHeeE---------------------------CCCCCEEccCccCcccCCccccceeeec
Confidence            689999854   9999999999999                           4555677777777755443 22221   


Q ss_pred             ccCCCcccchhhhcCCCCccchhHhHHHHHHHHHhCCCCCCC
Q 025467           74 VSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQT  115 (252)
Q Consensus        74 ~~t~~y~aPE~l~~~~~~~~~Diws~G~~l~~l~~g~~pf~~  115 (252)
                      .||..|++||++..+..+.++|||||||++.|+++|+.+...
T Consensus       239 ~gt~gY~~PEy~~~g~lt~KsDVySFGVvllElitgr~~~d~  280 (361)
T KOG1187|consen  239 MGTFGYLAPEYASTGKLTEKSDVYSFGVVLLELITGRKAVDQ  280 (361)
T ss_pred             CCCCccCChhhhccCCcCcccccccchHHHHHHHhCCcccCC
Confidence            689999999999888899999999999999999999987753

>KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms]

Probab=99.86  E-value=6.9e-22  Score=168.11  Aligned_cols=96  Identities=23%  Similarity=0.388  Sum_probs=78.9

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCC-Ccccc---C
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ-NYIVS---T   76 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~-~~~~~---t   76 (252)
                      |++||...++|||||.++|+|+                           ..+..+|++|||+++.+.... +...|   +
T Consensus       377 aMeYLEkknFIHRDLAARNCLV---------------------------gEnhiVKvADFGLsRlMtgDTYTAHAGAKFP  429 (1157)
T KOG4278|consen  377 AMEYLEKKNFIHRDLAARNCLV---------------------------GENHIVKVADFGLSRLMTGDTYTAHAGAKFP  429 (1157)
T ss_pred             HHHHHHHhhhhhhhhhhhhccc---------------------------cccceEEeeccchhhhhcCCceecccCccCc
Confidence            6889999999999999999999                           445567888899888765543 22333   4


Q ss_pred             CCcccchhhhcCCCCccchhHhHHHHHHHHHh-CCCCCCCCChHHHHH
Q 025467           77 RHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHENLEHLA  123 (252)
Q Consensus        77 ~~y~aPE~l~~~~~~~~~Diws~G~~l~~l~~-g~~pf~~~~~~~~~~  123 (252)
                      .-|+|||.+....|+.++|||+|||+||++.| |..||.+.+-..+..
T Consensus       430 IKWTAPEsLAyNtFSiKSDVWAFGVLLWEIATYGMsPYPGidlSqVY~  477 (1157)
T KOG4278|consen  430 IKWTAPESLAYNTFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYG  477 (1157)
T ss_pred             ccccCcccccccccccchhhHHHHHHHHHHHhcCCCCCCCccHHHHHH
Confidence            57999999999999999999999999999988 889999877544443

>KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms]

Probab=99.85  E-value=6.8e-22  Score=147.27  Aligned_cols=100  Identities=26%  Similarity=0.509  Sum_probs=76.0

Q ss_pred             Chhhhhc-cCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCC--CccccCC
Q 025467            1 MFAVMHD-LCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ--NYIVSTR   77 (252)
Q Consensus         1 aL~~lH~-~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~--~~~~~t~   77 (252)
                      ||.|||+ ..++|||+||+|||++.                           .+.+|+||||.+-......  +.-.|..
T Consensus       160 al~~L~~kL~vIHRDvKPsNiLIn~---------------------------~GqVKiCDFGIsG~L~dSiAkt~daGCk  212 (282)
T KOG0984|consen  160 ALEFLHSKLSVIHRDVKPSNILINY---------------------------DGQVKICDFGISGYLVDSIAKTMDAGCK  212 (282)
T ss_pred             HHHHHHHHhhhhhccCCcceEEEcc---------------------------CCcEEEcccccceeehhhhHHHHhcCCC
Confidence            6899998 57999999999999954                           4556777777665443322  2135777


Q ss_pred             Ccccchhhhc----CCCCccchhHhHHHHHHHHHhCCCCCCCC-ChHHHHHHHHH
Q 025467           78 HYRAPEVILG----LGWTYPCDIWSVGCILVELCTGEALFQTH-ENLEHLAMMER  127 (252)
Q Consensus        78 ~y~aPE~l~~----~~~~~~~Diws~G~~l~~l~~g~~pf~~~-~~~~~~~~~~~  127 (252)
                      .|||||.+..    ..|+.++||||+|+++.||.+++.||... +..+++.++++
T Consensus       213 pYmaPEri~~e~n~~gY~vksDvWSLGItmiElA~lr~PY~~w~tpF~qLkqvVe  267 (282)
T KOG0984|consen  213 PYMAPERINPELNQKGYSVKSDVWSLGITMIEMAILRFPYESWGTPFQQLKQVVE  267 (282)
T ss_pred             ccCChhhcCcccCcccceeehhhhhhhhhhhhhhhccccccccCCHHHHHHHHhc
Confidence            8999999864    36999999999999999999999999765 34455555444

>KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms]

Probab=99.85  E-value=4.5e-21  Score=170.98  Aligned_cols=90  Identities=27%  Similarity=0.451  Sum_probs=70.7

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCCCcc----cc-
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYI----VS-   75 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~~~~----~~-   75 (252)
                      |++||++..+|||||.++|||+...                           ..+||+|||+|+.......+.    .+ 
T Consensus       430 GMe~L~~~~~vHRDLAaRNVLi~~~---------------------------~~~kIaDFGlar~~~~~~~y~~~~~~~~  482 (609)
T KOG0200|consen  430 GMEYLASVPCVHRDLAARNVLITKN---------------------------KVIKIADFGLARDHYNKDYYRTKSSAGT  482 (609)
T ss_pred             HHHHHhhCCccchhhhhhhEEecCC---------------------------CEEEEccccceeccCCCCceEecCCCCc
Confidence            5789999999999999999999544                           456777777776433332221    12 


Q ss_pred             -CCCcccchhhhcCCCCccchhHhHHHHHHHHHh-CCCCCCCCC
Q 025467           76 -TRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHE  117 (252)
Q Consensus        76 -t~~y~aPE~l~~~~~~~~~Diws~G~~l~~l~~-g~~pf~~~~  117 (252)
                       +..|||||.+....|+.++|||||||++||+++ |..||.+..
T Consensus       483 LP~kWmApEsl~~~~ft~kSDVWSfGI~L~EifsLG~~PYp~~~  526 (609)
T KOG0200|consen  483 LPVKWMAPESLFDRVFTSKSDVWSFGILLWEIFTLGGTPYPGIP  526 (609)
T ss_pred             cceeecCHHHhccCcccccchhhHHHHHHHHHhhCCCCCCCCCC
Confidence             335999999999899999999999999999988 889997643

>KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms]

Probab=99.84  E-value=2.8e-21  Score=163.11  Aligned_cols=144  Identities=20%  Similarity=0.265  Sum_probs=111.2

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCCCc-----ccc
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNY-----IVS   75 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~~~-----~~~   75 (252)
                      ||+||.+.++||||+.++|+|+                           +.+.++||+|||+++..-....+     .+-
T Consensus       649 gmaYLes~nfVHrd~a~rNcLv---------------------------~~e~~iKiadfgmsR~lysg~yy~vqgr~vl  701 (807)
T KOG1094|consen  649 GMAYLESLNFVHRDLATRNCLV---------------------------DGEFTIKIADFGMSRNLYSGDYYRVQGRAVL  701 (807)
T ss_pred             HHHHHHhhchhhccccccceee---------------------------cCcccEEecCcccccccccCCceeeecceee
Confidence            5899999999999999999999                           66778899999988855444333     234


Q ss_pred             CCCcccchhhhcCCCCccchhHhHHHHHHHHHh--CCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHHHHHHhhcCCC
Q 025467           76 TRHYRAPEVILGLGWTYPCDIWSVGCILVELCT--GEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRL  153 (252)
Q Consensus        76 t~~y~aPE~l~~~~~~~~~Diws~G~~l~~l~~--g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~  153 (252)
                      +..|||+|.+..+.+++++|+|+|||++||+++  ...||....+.++.......+...+.+                  
T Consensus       702 piRwmawEsillgkFttaSDvWafgvTlwE~~~~C~e~Py~~lt~e~vven~~~~~~~~~~~------------------  763 (807)
T KOG1094|consen  702 PIRWMAWESILLGKFTTASDVWAFGVTLWEVFMLCREQPYSQLTDEQVVENAGEFFRDQGRQ------------------  763 (807)
T ss_pred             eeeehhHHHHHhccccchhhhhhhHHHHHHHHHHHhhCchhhhhHHHHHHhhhhhcCCCCcc------------------
Confidence            678999999999999999999999999999866  778998777766655544433322110                  


Q ss_pred             CCCccccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCCC
Q 025467          154 DWPEGAASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDR  233 (252)
Q Consensus       154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R  233 (252)
                                                                          .....+...+..++.||.+||.+|-++|
T Consensus       764 ----------------------------------------------------~~l~~P~~cp~~lyelml~Cw~~es~~R  791 (807)
T KOG1094|consen  764 ----------------------------------------------------VVLSRPPACPQGLYELMLRCWRRESEQR  791 (807)
T ss_pred             ----------------------------------------------------eeccCCCcCcHHHHHHHHHHhchhhhcC
Confidence                                                                0111223456688999999999999999


Q ss_pred             CCHHHHHc
Q 025467          234 LTAREALR  241 (252)
Q Consensus       234 ~ta~e~l~  241 (252)
                      ||++++-.
T Consensus       792 PsFe~lh~  799 (807)
T KOG1094|consen  792 PSFEQLHL  799 (807)
T ss_pred             CCHHHHHH
Confidence            99999843

>KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms]

Probab=99.84  E-value=1.4e-21  Score=171.29  Aligned_cols=147  Identities=26%  Similarity=0.439  Sum_probs=111.6

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCC---CccccCC
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ---NYIVSTR   77 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~---~~~~~t~   77 (252)
                      ||.+||.+.++|||||-.|||++.                           ++.+|++|||.+.....+.   ...+||+
T Consensus       135 gl~HLH~nkviHRDikG~NiLLT~---------------------------e~~VKLvDFGvSaQldsT~grRnT~iGtP  187 (953)
T KOG0587|consen  135 GLAHLHNNKVIHRDIKGQNVLLTE---------------------------NAEVKLVDFGVSAQLDSTVGRRNTFIGTP  187 (953)
T ss_pred             HHHHHhhcceeeecccCceEEEec---------------------------cCcEEEeeeeeeeeeecccccccCcCCCc
Confidence            588999999999999999999955                           4457777887765443322   3458999


Q ss_pred             CcccchhhhcC-----CCCccchhHhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHHHHHHhhcCC
Q 025467           78 HYRAPEVILGL-----GWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGR  152 (252)
Q Consensus        78 ~y~aPE~l~~~-----~~~~~~Diws~G~~l~~l~~g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~  152 (252)
                      .|||||++...     .|+..+|+||+|++-.+|.-|.+|+.......   .+..+-..+|..+                
T Consensus       188 ~WMAPEViac~e~~d~tyd~R~D~WsLGITaIEladG~PPl~DmHPmr---aLF~IpRNPPPkL----------------  248 (953)
T KOG0587|consen  188 YWMAPEVIACDESPDATYDYRSDLWSLGITAIEMAEGAPPLCDMHPMR---ALFLIPRNPPPKL----------------  248 (953)
T ss_pred             ccccceeeecccCCCCCcccccchhhccceeehhcCCCCCccCcchhh---hhccCCCCCCccc----------------
Confidence            99999999754     47889999999999999999999986544322   2333333222211                


Q ss_pred             CCCCccccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCC
Q 025467          153 LDWPEGAASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTD  232 (252)
Q Consensus       153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~  232 (252)
                                                                              ..+...+++|.++|..||..|=++
T Consensus       249 --------------------------------------------------------krp~kWs~~FndFIs~cL~Kd~e~  272 (953)
T KOG0587|consen  249 --------------------------------------------------------KRPKKWSKKFNDFISTCLVKDYEQ  272 (953)
T ss_pred             --------------------------------------------------------cchhhHHHHHHHHHHHHHhhcccc
Confidence                                                                    111234568999999999999999


Q ss_pred             CCCHHHHHcCCCCCCcc
Q 025467          233 RLTAREALRHPFFTRDH  249 (252)
Q Consensus       233 R~ta~e~l~hpwf~~~~  249 (252)
                      ||+..++|+|||++..+
T Consensus       273 RP~~~~ll~hpFi~e~~  289 (953)
T KOG0587|consen  273 RPSTEELLKHPFITEQP  289 (953)
T ss_pred             CcchhhhccCCcccccc
Confidence            99999999999998543

>KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms]

Probab=99.84  E-value=8.5e-21  Score=153.55  Aligned_cols=94  Identities=20%  Similarity=0.358  Sum_probs=75.6

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCCCccc-----c
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIV-----S   75 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~~~~~-----~   75 (252)
                      |++|||++||||.||..+|+++                           +....+||+|=.+++..-+......     .
T Consensus       408 am~hlh~~~ViHkDiAaRNCvI---------------------------dd~LqVkltDsaLSRDLFP~DYhcLGDnEnR  460 (563)
T KOG1024|consen  408 AMEHLHNHGVIHKDIAARNCVI---------------------------DDQLQVKLTDSALSRDLFPGDYHCLGDNENR  460 (563)
T ss_pred             HHHHHHhcCcccchhhhhccee---------------------------hhheeEEeccchhccccCcccccccCCCCCC
Confidence            6899999999999999999999                           4445677777766665444333333     3


Q ss_pred             CCCcccchhhhcCCCCccchhHhHHHHHHHHHh-CCCCCCCCChHHH
Q 025467           76 TRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHENLEH  121 (252)
Q Consensus        76 t~~y~aPE~l~~~~~~~~~Diws~G~~l~~l~~-g~~pf~~~~~~~~  121 (252)
                      +..||+||.+....|+.++|+|||||++||+++ |+.|+...+..+.
T Consensus       461 PvkWMslEal~n~~yssasDvWsfGVllWELmtlg~~PyaeIDPfEm  507 (563)
T KOG1024|consen  461 PVKWMSLEALQNSHYSSASDVWSFGVLLWELMTLGKLPYAEIDPFEM  507 (563)
T ss_pred             cccccCHHHHhhhhhcchhhhHHHHHHHHHHHhcCCCCccccCHHHH
Confidence            567999999999999999999999999999988 8899876665443

>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]

Probab=99.83  E-value=2.5e-21  Score=171.00  Aligned_cols=152  Identities=24%  Similarity=0.363  Sum_probs=109.2

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCC-------Ccc
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ-------NYI   73 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~-------~~~   73 (252)
                      +++|+|++||.|||+|++|+++...                           +.+|++|||.+.......       ...
T Consensus       432 Gv~y~h~~GiahrdlK~enll~~~~---------------------------g~lki~Dfg~~~vf~~~~e~~~~~~~g~  484 (601)
T KOG0590|consen  432 GVKYLHSMGLAHRDLKLENLLVTEN---------------------------GILKIIDFGAASVFRYPWEKNIHESSGI  484 (601)
T ss_pred             HHHHHHhcCceeccCccccEEEecC---------------------------CceEEeecCcceeeccCcchhhhhhcCc
Confidence            5799999999999999999999544                           456777777765443321       125


Q ss_pred             ccCCCcccchhhhcCCCC-ccchhHhHHHHHHHHHhCCCCCCCCChHHHHH-HHHHHhCCCchHHHHHhhHHHHHHhhcC
Q 025467           74 VSTRHYRAPEVILGLGWT-YPCDIWSVGCILVELCTGEALFQTHENLEHLA-MMERVLGPLPQHMLKRVDRHAEKYVRRG  151 (252)
Q Consensus        74 ~~t~~y~aPE~l~~~~~~-~~~Diws~G~~l~~l~~g~~pf~~~~~~~~~~-~~~~~~g~~p~~~~~~~~~~~~~~~~~~  151 (252)
                      +|+..|+|||++.+..|. ...||||.|+++..|.+|+.||......+... .+.                         
T Consensus       485 ~gS~pY~apE~~~~~~ydpr~vDiwS~~ii~~~m~~~~~~Wk~a~~~~~~~~~~~-------------------------  539 (601)
T KOG0590|consen  485 VGSDPYLAPEVLTGKEYDPRAVDVWSCGIIYICMILGRFPWKVAKKSDNSFKTNN-------------------------  539 (601)
T ss_pred             ccCCcCcCcccccccccCcchhhhhhccceEEEEecCCCccccccccccchhhhc-------------------------
Confidence            789999999999999886 56899999999999999999997543322111 000                         


Q ss_pred             CCCCCccccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCC
Q 025467          152 RLDWPEGAASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPT  231 (252)
Q Consensus       152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~  231 (252)
                      ...+......                                             ....+...+...+.+|.+||++||.
T Consensus       540 ~~~~~~~~~~---------------------------------------------~~~~~~~lp~~~~~~~~~~l~~~P~  574 (601)
T KOG0590|consen  540 YSDQRNIFEG---------------------------------------------PNRLLSLLPRETRIIIYRMLQLDPT  574 (601)
T ss_pred             cccccccccC---------------------------------------------hHHHHHhchhhHHHHHHHHccCChh
Confidence            0000000000                                             0111233456788999999999999


Q ss_pred             CCCCHHHHHcCCCCCCcc
Q 025467          232 DRLTAREALRHPFFTRDH  249 (252)
Q Consensus       232 ~R~ta~e~l~hpwf~~~~  249 (252)
                      +|+|+++|++++||+...
T Consensus       575 ~R~ti~~i~~d~W~~~i~  592 (601)
T KOG0590|consen  575 KRITIEQILNDEWIRSIE  592 (601)
T ss_pred             heecHHHHhhChHhhhcc
Confidence            999999999999998754

>KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms]

Probab=99.82  E-value=6.4e-21  Score=164.10  Aligned_cols=93  Identities=31%  Similarity=0.486  Sum_probs=78.8

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCC--CccccCCC
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ--NYIVSTRH   78 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~--~~~~~t~~   78 (252)
                      ||.|||.+|||||||||.||++-...                       +.....||+|||.|+....+.  ...+||..
T Consensus       132 al~~LrEn~IvHRDlKP~NIvl~~Ge-----------------------dgq~IyKLtDfG~Arel~d~s~~~S~vGT~~  188 (732)
T KOG4250|consen  132 ALRHLRENGIVHRDLKPGNIVLQIGE-----------------------DGQSIYKLTDFGAARELDDNSLFTSLVGTEE  188 (732)
T ss_pred             HHHHHHHcCceeccCCCCcEEEeecC-----------------------CCceEEeeecccccccCCCCCeeeeecCchh
Confidence            68999999999999999999983321                       345567999999998766654  34689999


Q ss_pred             cccchhhh-cCCCCccchhHhHHHHHHHHHhCCCCCCCC
Q 025467           79 YRAPEVIL-GLGWTYPCDIWSVGCILVELCTGEALFQTH  116 (252)
Q Consensus        79 y~aPE~l~-~~~~~~~~Diws~G~~l~~l~~g~~pf~~~  116 (252)
                      |.+||+.. ...|+..+|.|||||++|+.+||..||...
T Consensus       189 YLhPel~E~q~~y~~tVDLWS~GvtlY~caTG~lPF~p~  227 (732)
T KOG4250|consen  189 YLHPELYERQKKYTATVDLWSFGVTLYECATGELPFIPF  227 (732)
T ss_pred             hcChHHHhhccCcCceeehhhhhhHHHHHhccCCCCCcC
Confidence            99999999 478899999999999999999999999643

>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]

Probab=99.81  E-value=6.1e-20  Score=151.57  Aligned_cols=159  Identities=26%  Similarity=0.295  Sum_probs=101.3

Q ss_pred             Chhhhhcc---------CccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCC-
Q 025467            1 MFAVMHDL---------CMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ-   70 (252)
Q Consensus         1 aL~~lH~~---------~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~-   70 (252)
                      +|+|||+.         .|+|||||..|||+..+..                           +-|+|||+|....... 
T Consensus       319 GLa~LHee~p~~d~~Kp~IaHRDlkSkNVLvK~DlT---------------------------ccIaDFGLAl~~~p~~~  371 (534)
T KOG3653|consen  319 GLAHLHEELPRGDHHKPPIAHRDLKSKNVLVKNDLT---------------------------CCIADFGLALRLEPGKP  371 (534)
T ss_pred             HHHHhcccCCcCCCCCCccccccccccceEEccCCc---------------------------EEeeccceeEEecCCCC
Confidence            58899953         4999999999999965554                           4555555554433221 


Q ss_pred             ----CccccCCCcccchhhhcCC-CC-----ccchhHhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHh
Q 025467           71 ----NYIVSTRHYRAPEVILGLG-WT-----YPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRV  140 (252)
Q Consensus        71 ----~~~~~t~~y~aPE~l~~~~-~~-----~~~Diws~G~~l~~l~~g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~  140 (252)
                          ...+||..|||||++.+.- +.     .+.||||+|.++||+++++..+......+...-+....|.-|.     .
T Consensus       372 ~~d~~~qVGT~RYMAPEvLEgainl~d~~Afkr~DvYamgLVLWEi~SRC~~~~~~~vp~Yqlpfe~evG~hPt-----~  446 (534)
T KOG3653|consen  372 QGDTHGQVGTRRYMAPEVLEGAINLQDRDAFKRIDVYAMGLVLWEIASRCTDADPGPVPEYQLPFEAEVGNHPT-----L  446 (534)
T ss_pred             CcchhhhhhhhhhcCHHHHhhhcccccHHHHHHHHHHHHHHHHHHHHhhcccccCCCCCcccCchhHHhcCCCC-----H
Confidence                1258999999999998752 22     4689999999999999998776532222222333434443331     1


Q ss_pred             hHHHHHHhh-cCCCCCCccccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHH
Q 025467          141 DRHAEKYVR-RGRLDWPEGAASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLT  219 (252)
Q Consensus       141 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  219 (252)
                      ++.....++ +.+..++.....                                                  ......+.
T Consensus       447 e~mq~~VV~kK~RP~~p~~W~~--------------------------------------------------h~~~~~l~  476 (534)
T KOG3653|consen  447 EEMQELVVRKKQRPKIPDAWRK--------------------------------------------------HAGMAVLC  476 (534)
T ss_pred             HHHHHHHHhhccCCCChhhhhc--------------------------------------------------CccHHHHH
Confidence            111222222 233334332111                                                  12335788


Q ss_pred             HHHHHhccCCCCCCCCHHHHHc
Q 025467          220 HLLQGLLRYDPTDRLTAREALR  241 (252)
Q Consensus       220 ~ll~~~L~~dP~~R~ta~e~l~  241 (252)
                      +.+..||+-||+-|+||.-+.+
T Consensus       477 et~EeCWDhDaeARLTA~Cv~e  498 (534)
T KOG3653|consen  477 ETIEECWDHDAEARLTAGCVEE  498 (534)
T ss_pred             HHHHHHcCCchhhhhhhHHHHH
Confidence            9999999999999999886643

>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]

Probab=99.80  E-value=5.9e-20  Score=164.32  Aligned_cols=166  Identities=29%  Similarity=0.376  Sum_probs=122.1

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCCCccccCCCcc
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYR   80 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~~~~~~t~~y~   80 (252)
                      |++|||+-||+|||+||+|.+++.-+..+++|||+.......-..   ....+.++.    .++.+  .....+||+.|.
T Consensus       155 a~Eylh~ygivhrdlkpdnllIT~mGhiKlTDfgLsk~GLms~at---nl~eg~I~k----~t~Ef--~dKqvcgTPeyi  225 (1205)
T KOG0606|consen  155 AVEYLHSYGIVHRDLKPDNLLITSMGHIKLTDFGLSKKGLMSLAT---NLKEGHIEK----DTHEF--QDKQVCGTPEYI  225 (1205)
T ss_pred             HhHhhccCCeecCCCCCCcceeeecccccccchhhhhhhhhhccc---hhhhcchHH----HHHHh--hhccccCCcccc
Confidence            689999999999999999999998888888888766432221111   000111110    00000  112358999999


Q ss_pred             cchhhhcCCCCccchhHhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHHHHHHhhcCCCCCCcccc
Q 025467           81 APEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAA  160 (252)
Q Consensus        81 aPE~l~~~~~~~~~Diws~G~~l~~l~~g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (252)
                      |||++.-.+|+..+|+|++|+|+|+++-|+.||.+++..+.+.+.+......|+                          
T Consensus       226 aPeVilrqgygkpvdwwamGiIlyeFLVgcvpffGdtpeelfg~visd~i~wpE--------------------------  279 (1205)
T KOG0606|consen  226 APEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTPEELFGQVISDDIEWPE--------------------------  279 (1205)
T ss_pred             ChhhhhhhccCCCccHHHHHHHHHHHheeeeeccCCCHHHHHhhhhhhhccccc--------------------------
Confidence            999999999999999999999999999999999988777666665554443332                          


Q ss_pred             chhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCCCC---CHH
Q 025467          161 SRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRL---TAR  237 (252)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~---ta~  237 (252)
                                                                       .+.....++.+++..+|+.+|..|.   .+-
T Consensus       280 -------------------------------------------------~dea~p~Ea~dli~~LL~qnp~~Rlgt~ga~  310 (1205)
T KOG0606|consen  280 -------------------------------------------------EDEALPPEAQDLIEQLLRQNPLCRLGTGGAL  310 (1205)
T ss_pred             -------------------------------------------------cCcCCCHHHHHHHHHHHHhChHhhcccchhh
Confidence                                                             1234557999999999999999996   478


Q ss_pred             HHHcCCCCCCccc
Q 025467          238 EALRHPFFTRDHL  250 (252)
Q Consensus       238 e~l~hpwf~~~~~  250 (252)
                      ++.+|+||+....
T Consensus       311 evk~h~ff~~LDw  323 (1205)
T KOG0606|consen  311 EVKQHGFFQLLDW  323 (1205)
T ss_pred             hhhhccceeeccc
Confidence            8899999987653

>KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms]

Probab=99.80  E-value=5.6e-20  Score=151.15  Aligned_cols=151  Identities=23%  Similarity=0.429  Sum_probs=110.1

Q ss_pred             ChhhhhccC--ccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCC--------
Q 025467            1 MFAVMHDLC--MIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ--------   70 (252)
Q Consensus         1 aL~~lH~~~--ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~--------   70 (252)
                      ||.||....  |||-||||.|||+...                        ...+.+||+|||+++.+....        
T Consensus       580 AL~YLNEikpPIIHYDLKPgNILLv~G------------------------tacGeIKITDFGLSKIMdddSy~~vdGme  635 (775)
T KOG1151|consen  580 ALKYLNEIKPPIIHYDLKPGNILLVNG------------------------TACGEIKITDFGLSKIMDDDSYNSVDGME  635 (775)
T ss_pred             HHHHHhccCCCeeeeccCCccEEEecC------------------------cccceeEeeecchhhhccCCccCccccee
Confidence            688998754  9999999999998542                        345678999999888765432        


Q ss_pred             --CccccCCCcccchhhhcC----CCCccchhHhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHHH
Q 025467           71 --NYIVSTRHYRAPEVILGL----GWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHA  144 (252)
Q Consensus        71 --~~~~~t~~y~aPE~l~~~----~~~~~~Diws~G~~l~~l~~g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~  144 (252)
                        ....||-+|++||.+..+    ..+.+.||||+|||+|..+.|+-||...-...-+.+...++               
T Consensus       636 LTSQgAGTYWYLPPEcFvVgkePPKIsnKVDVWSvGVIFyQClYGrKPFGhnqsQQdILqeNTIl---------------  700 (775)
T KOG1151|consen  636 LTSQGAGTYWYLPPECFVVGKEPPKISNKVDVWSVGVIFYQCLYGRKPFGHNQSQQDILQENTIL---------------  700 (775)
T ss_pred             eecccCceeeecCcceeecCCCCCccccceeeEeeehhhhhhhccCCCCCCchhHHHHHhhhchh---------------
Confidence              124789999999998755    36789999999999999999999996432211111111111               


Q ss_pred             HHHhhcCCCCCCccccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHH
Q 025467          145 EKYVRRGRLDWPEGAASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQG  224 (252)
Q Consensus       145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~  224 (252)
                          +.....+|                                                     ..+.++.++.+||++
T Consensus       701 ----kAtEVqFP-----------------------------------------------------~KPvVsseAkaFIRR  723 (775)
T KOG1151|consen  701 ----KATEVQFP-----------------------------------------------------PKPVVSSEAKAFIRR  723 (775)
T ss_pred             ----cceeccCC-----------------------------------------------------CCCccCHHHHHHHHH
Confidence                00011111                                                     124567799999999


Q ss_pred             hccCCCCCCCCHHHHHcCCCCCC
Q 025467          225 LLRYDPTDRLTAREALRHPFFTR  247 (252)
Q Consensus       225 ~L~~dP~~R~ta~e~l~hpwf~~  247 (252)
                      ||++--+.|...-++..||||.-
T Consensus       724 CLaYRKeDR~DV~qLA~dpyllP  746 (775)
T KOG1151|consen  724 CLAYRKEDRIDVQQLACDPYLLP  746 (775)
T ss_pred             HHHhhhhhhhhHHHHccCccccc
Confidence            99999999999999999999975

>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional

Probab=99.79  E-value=8.4e-20  Score=172.03  Aligned_cols=85  Identities=21%  Similarity=0.296  Sum_probs=65.0

Q ss_pred             Chhhhh---ccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCCCccccCC
Q 025467            1 MFAVMH---DLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTR   77 (252)
Q Consensus         1 aL~~lH---~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~~~~~~t~   77 (252)
                      ||+|||   +.+|+||||||+||+++.++.                           .++. ++.+..... .....++.
T Consensus       792 ~L~yLH~~~~~~iiH~dlkp~Nil~~~~~~---------------------------~~~~-~~~~~~~~~-~~~~~~t~  842 (968)
T PLN00113        792 ALRFLHCRCSPAVVVGNLSPEKIIIDGKDE---------------------------PHLR-LSLPGLLCT-DTKCFISS  842 (968)
T ss_pred             HHHHhccCCCCCeecCCCCHHhEEECCCCc---------------------------eEEE-ecccccccc-CCCccccc
Confidence            689999   669999999999999954332                           2222 333222111 11236788


Q ss_pred             CcccchhhhcCCCCccchhHhHHHHHHHHHhCCCCCC
Q 025467           78 HYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQ  114 (252)
Q Consensus        78 ~y~aPE~l~~~~~~~~~Diws~G~~l~~l~~g~~pf~  114 (252)
                      .|+|||++.+..++.++||||+||++|++++|+.||.
T Consensus       843 ~y~aPE~~~~~~~~~~sDv~S~Gvvl~el~tg~~p~~  879 (968)
T PLN00113        843 AYVAPETRETKDITEKSDIYGFGLILIELLTGKSPAD  879 (968)
T ss_pred             cccCcccccCCCCCcccchhhHHHHHHHHHhCCCCCC
Confidence            9999999998889999999999999999999999984

>KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms]

Probab=99.77  E-value=8.7e-19  Score=153.26  Aligned_cols=92  Identities=26%  Similarity=0.388  Sum_probs=73.7

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCCCcc-----cc
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYI-----VS   75 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~~~~-----~~   75 (252)
                      ||.|||.+++|||||..+|||+.                           ....+|+.|||+++.........     .-
T Consensus       810 gM~YLe~qrlVHrdLaaRNVLVk---------------------------sP~hvkitdfgla~ll~~d~~ey~~~~gK~  862 (1177)
T KOG1025|consen  810 GMKYLEEQRLVHRDLAARNVLVK---------------------------SPNHVKITDFGLAKLLAPDEKEYSAPGGKV  862 (1177)
T ss_pred             HHHHHHhcchhhhhhhhhheeec---------------------------CCCeEEEEecchhhccCccccccccccccc
Confidence            68999999999999999999994                           44567777777776654433221     12


Q ss_pred             CCCcccchhhhcCCCCccchhHhHHHHHHHHHh-CCCCCCCCChH
Q 025467           76 TRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHENL  119 (252)
Q Consensus        76 t~~y~aPE~l~~~~~~~~~Diws~G~~l~~l~~-g~~pf~~~~~~  119 (252)
                      .+.|+|-|.+....|++++|||||||++||++| |..|+.+....
T Consensus       863 pikwmale~i~~~~~thqSDVWsfGVtiWElmTFGa~Py~gi~~~  907 (1177)
T KOG1025|consen  863 PIKWMALESIRIRKYTHQSDVWSFGVTIWELMTFGAKPYDGIPAE  907 (1177)
T ss_pred             CcHHHHHHHhhccCCCchhhhhhhhhhHHHHHhcCCCccCCCCHH
Confidence            456899999999999999999999999999988 99999876543

>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]

Probab=99.74  E-value=2.2e-18  Score=147.69  Aligned_cols=148  Identities=25%  Similarity=0.429  Sum_probs=102.9

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCC---CCccccCC
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD---QNYIVSTR   77 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~---~~~~~~t~   77 (252)
                      +|+|||++|=+|||||-.|||++..+.+++.|||                           .+......   .....||+
T Consensus       124 gl~ylhs~gk~hRdiKGanilltd~gDvklaDfg---------------------------vsaqitati~KrksfiGtp  176 (829)
T KOG0576|consen  124 GLKYLHSQGKIHRDIKGANILLTDEGDVKLADFG---------------------------VSAQITATIAKRKSFIGTP  176 (829)
T ss_pred             cchhhhcCCcccccccccceeecccCceeecccC---------------------------chhhhhhhhhhhhcccCCc
Confidence            5899999999999999999999776665555554                           43222111   12248999


Q ss_pred             Ccccchhhh---cCCCCccchhHhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHHHHHHhhcCCCC
Q 025467           78 HYRAPEVIL---GLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLD  154 (252)
Q Consensus        78 ~y~aPE~l~---~~~~~~~~Diws~G~~l~~l~~g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~  154 (252)
                      +|||||+..   .+.|...+|||++|++..++..-++|.-.-.....+..|.+ .+.-|..                   
T Consensus       177 ywmapEvaaverkggynqlcdiwa~gitAiel~eLqpplfdlhpmr~l~LmTk-S~~qpp~-------------------  236 (829)
T KOG0576|consen  177 YWMAPEVAAVERKGGYNQLCDIWALGITAIELGELQPPLFDLHPMRALFLMTK-SGFQPPT-------------------  236 (829)
T ss_pred             cccchhHHHHHhcccccccccccccccchhhhhhcCCcccccchHHHHHHhhc-cCCCCCc-------------------
Confidence            999999875   45799999999999998888776666432222222222222 1111100                   


Q ss_pred             CCccccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCCCC
Q 025467          155 WPEGAASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRL  234 (252)
Q Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~  234 (252)
                                                                           .+.....++.|.+|++.+|..+|.+||
T Consensus       237 -----------------------------------------------------lkDk~kws~~fh~fvK~altknpKkRp  263 (829)
T KOG0576|consen  237 -----------------------------------------------------LKDKTKWSEFFHNFVKGALTKNPKKRP  263 (829)
T ss_pred             -----------------------------------------------------ccCCccchHHHHHHHHHHhcCCCccCC
Confidence                                                                 011133456899999999999999999


Q ss_pred             CHHHHHcCCCCCCc
Q 025467          235 TAREALRHPFFTRD  248 (252)
Q Consensus       235 ta~e~l~hpwf~~~  248 (252)
                      ||+-+|.|||+...
T Consensus       264 taeklL~h~fvs~~  277 (829)
T KOG0576|consen  264 TAEKLLQHPFVSQT  277 (829)
T ss_pred             Chhhheeceeeccc
Confidence            99999999998764

>KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms]

Probab=99.74  E-value=1.5e-18  Score=134.43  Aligned_cols=90  Identities=30%  Similarity=0.474  Sum_probs=73.3

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCCCccccCCCcc
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYR   80 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~~~~~~t~~y~   80 (252)
                      |+.|+|+.++||||||.+|||+-..+                         .-.+|+||||..+.........--+..|.
T Consensus       133 Ai~fMHsknlVHRdlK~eNiLif~~d-------------------------f~rvKlcDFG~t~k~g~tV~~~~~~~~y~  187 (378)
T KOG1345|consen  133 AIEFMHSKNLVHRDLKAENILIFDAD-------------------------FYRVKLCDFGLTRKVGTTVKYLEYVNNYH  187 (378)
T ss_pred             HHHHhhccchhhcccccceEEEecCC-------------------------ccEEEeeecccccccCceehhhhhhcccC
Confidence            68999999999999999999995432                         22689999999887666555544566799


Q ss_pred             cchhhhcC-----CCCccchhHhHHHHHHHHHhCCCCCCC
Q 025467           81 APEVILGL-----GWTYPCDIWSVGCILVELCTGEALFQT  115 (252)
Q Consensus        81 aPE~l~~~-----~~~~~~Diws~G~~l~~l~~g~~pf~~  115 (252)
                      +||++...     ...+..|+|.||++++..++|+.|++.
T Consensus       188 ~pe~~~~~~ne~~~~~ps~D~WqfGIi~f~cltG~~PWQk  227 (378)
T KOG1345|consen  188 APELCDTVVNEKLVVNPSTDIWQFGIIFFYCLTGKFPWQK  227 (378)
T ss_pred             CcHHHhhccccceEecccccchheeeeeeeeecCCCcchh
Confidence            99987632     246889999999999999999999963

>KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.73  E-value=2.9e-18  Score=140.81  Aligned_cols=90  Identities=26%  Similarity=0.321  Sum_probs=60.7

Q ss_pred             Chhhhhc-----c---CccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCCCc
Q 025467            1 MFAVMHD-----L---CMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNY   72 (252)
Q Consensus         1 aL~~lH~-----~---~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~~~   72 (252)
                      +|+|||.     +   .|+|||||..|||+..++.+.|+|+|+|........            .        .......
T Consensus       320 GLaHLH~eI~GTqgKPaIAHRDlKSKNILVKkn~~C~IADLGLAv~h~~~t~------------~--------idi~~N~  379 (513)
T KOG2052|consen  320 GLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSDTD------------T--------IDIPPNP  379 (513)
T ss_pred             hHHHHHHHHhcCCCCchhhccccccccEEEccCCcEEEeeceeeEEecccCC------------c--------ccCCCCC
Confidence            5899994     2   399999999999996655555555554432211110            0        1112334


Q ss_pred             cccCCCcccchhhhcCC----C--CccchhHhHHHHHHHHHhCC
Q 025467           73 IVSTRHYRAPEVILGLG----W--TYPCDIWSVGCILVELCTGE  110 (252)
Q Consensus        73 ~~~t~~y~aPE~l~~~~----~--~~~~Diws~G~~l~~l~~g~  110 (252)
                      .+||..|||||++...-    |  -..+||||||+++||++.+.
T Consensus       380 rVGTKRYMAPEvLdetin~~~Fesyk~ADIYafgLVlWEiarRc  423 (513)
T KOG2052|consen  380 RVGTKRYMAPEVLDETINMKHFESYKRADIYAFGLVLWEIARRC  423 (513)
T ss_pred             ccceeeccChHHhhhhcChhhhhhhhHHHHHHHHHHHHHHHHHh
Confidence            58999999999996431    2  25689999999999997643

>cd00180 PKc Catalytic domain of Protein Kinases

Probab=99.71  E-value=2.5e-17  Score=127.42  Aligned_cols=80  Identities=45%  Similarity=0.694  Sum_probs=63.1

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCC---CCccccCC
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD---QNYIVSTR   77 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~---~~~~~~t~   77 (252)
                      ||++||+.|++|+||+|.||++...                          ...++++|||.+......   .....+..
T Consensus       104 ~l~~lh~~~~~H~dl~~~ni~~~~~--------------------------~~~~~l~d~~~~~~~~~~~~~~~~~~~~~  157 (215)
T cd00180         104 GLEYLHSNGIIHRDLKPENILLDSD--------------------------NGKVKLADFGLSKLLTSDKSLLKTIVGTP  157 (215)
T ss_pred             HHHHHHhCCeeccCCCHhhEEEeCC--------------------------CCcEEEecCCceEEccCCcchhhcccCCC
Confidence            5789999999999999999999540                          345677777776544333   22235677


Q ss_pred             CcccchhhhcC-CCCccchhHhHHHHHHHH
Q 025467           78 HYRAPEVILGL-GWTYPCDIWSVGCILVEL  106 (252)
Q Consensus        78 ~y~aPE~l~~~-~~~~~~Diws~G~~l~~l  106 (252)
                      .|++||.+... .++.+.|+|++|++++++
T Consensus       158 ~~~~pe~~~~~~~~~~~~D~~~lg~~~~~l  187 (215)
T cd00180         158 AYMAPEVLLGKGYYSEKSDIWSLGVILYEL  187 (215)
T ss_pred             CccChhHhcccCCCCchhhhHHHHHHHHHH
Confidence            89999999876 778899999999999998

Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which

>KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms]

Probab=99.69  E-value=6.7e-18  Score=142.73  Aligned_cols=87  Identities=34%  Similarity=0.629  Sum_probs=76.4

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCC-CccccCCCc
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ-NYIVSTRHY   79 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~-~~~~~t~~y   79 (252)
                      |.++||++||||||||-+|+.+                           +.++.+||+|||.+......+ ...+||..|
T Consensus       682 gi~hlh~~~ivhrdikdenviv---------------------------d~~g~~klidfgsaa~~ksgpfd~f~gtv~~  734 (772)
T KOG1152|consen  682 GIKHLHDQGIVHRDIKDENVIV---------------------------DSNGFVKLIDFGSAAYTKSGPFDVFVGTVDY  734 (772)
T ss_pred             ccccccccCceecccccccEEE---------------------------ecCCeEEEeeccchhhhcCCCcceeeeeccc
Confidence            5789999999999999999999                           667789999999987655443 346899999


Q ss_pred             ccchhhhcCCC-CccchhHhHHHHHHHHHhCCCCCC
Q 025467           80 RAPEVILGLGW-TYPCDIWSVGCILVELCTGEALFQ  114 (252)
Q Consensus        80 ~aPE~l~~~~~-~~~~Diws~G~~l~~l~~g~~pf~  114 (252)
                      .|||++.+.+| +...|||++|+++|.+.....||.
T Consensus       735 aapevl~g~~y~gk~qdiwalgillytivykenpyy  770 (772)
T KOG1152|consen  735 AAPEVLGGEKYLGKPQDIWALGILLYTIVYKENPYY  770 (772)
T ss_pred             cchhhhCCCccCCCcchhhhhhheeeEEEeccCCCc
Confidence            99999999988 578899999999999999999885

>KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms]

Probab=99.66  E-value=1.7e-16  Score=142.94  Aligned_cols=95  Identities=32%  Similarity=0.497  Sum_probs=64.5

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccC--CCCCCCCccccCCCCCCceEEeecCCccccCCCCCccccCCC
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSS--LHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRH   78 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~--~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~~~~~~t~~   78 (252)
                      ||+-+|..||+|||||.+|||++.=+=+.++||-..  ...|.+.       .      +||+.-+....      .-..
T Consensus       132 al~qcH~~gVcHGDIKsENILiTSWNW~~LtDFAsFKPtYLPeDN-------P------adf~fFFDTSr------RRtC  192 (1431)
T KOG1240|consen  132 ALSQCHKLGVCHGDIKSENILITSWNWLYLTDFASFKPTYLPEDN-------P------ADFTFFFDTSR------RRTC  192 (1431)
T ss_pred             HHHHHHHcCccccccccceEEEeeechhhhhcccccCCccCCCCC-------c------ccceEEEecCC------ceee
Confidence            578899999999999999999988777777776432  1111111       1      23332211111      1125


Q ss_pred             cccchhhhcC----------C-CCccchhHhHHHHHHHHHh-CCCCCC
Q 025467           79 YRAPEVILGL----------G-WTYPCDIWSVGCILVELCT-GEALFQ  114 (252)
Q Consensus        79 y~aPE~l~~~----------~-~~~~~Diws~G~~l~~l~~-g~~pf~  114 (252)
                      |.|||.+...          + .+++.||+|+||+++|+++ |+++|.
T Consensus       193 YiAPERFv~~~~~~~~~q~~~~L~paMDIFS~GCViaELf~Eg~PlF~  240 (1431)
T KOG1240|consen  193 YIAPERFVSALGKTSVGQDAPLLTPAMDIFSAGCVIAELFLEGRPLFT  240 (1431)
T ss_pred             ecChHhhhccccccccCCcccccChhhhhhhhhHHHHHHHhcCCCccc
Confidence            8999987641          2 5678999999999999988 788884

>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]

Probab=99.66  E-value=4.8e-17  Score=139.10  Aligned_cols=136  Identities=30%  Similarity=0.462  Sum_probs=104.4

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCCCccccCCCcc
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYR   80 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~~~~~~t~~y~   80 (252)
                      |++++|+.+|+|||+|++||++                           +..+++++.|||+++........ +||.-||
T Consensus       109 ald~lh~l~iiyrd~k~enill---------------------------d~~Ghi~~tdfglske~v~~~~~-cgt~eym  160 (612)
T KOG0603|consen  109 ALDHLHKLGIAYRDYKLENVLL---------------------------LLEGHIKLTDFGLSKEAVKEKIA-CGTYEYR  160 (612)
T ss_pred             HHhhcchhHHHHhcccccceee---------------------------cccCccccCCchhhhHhHhhhhc-ccchhhh
Confidence            5789999999999999999999                           45566777777777654333322 8899999


Q ss_pred             cchhhhcCCCCccchhHhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHHHHHHhhcCCCCCCcccc
Q 025467           81 APEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAA  160 (252)
Q Consensus        81 aPE~l~~~~~~~~~Diws~G~~l~~l~~g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (252)
                      |||++.  +...+.|.||+|++++++++|..||.+    +...+|.+.--..|                           
T Consensus       161 ApEI~~--gh~~a~D~ws~gvl~felltg~~pf~~----~~~~~Il~~~~~~p---------------------------  207 (612)
T KOG0603|consen  161 APEIIN--GHLSAADWWSFGVLAFELLTGTLPFGG----DTMKRILKAELEMP---------------------------  207 (612)
T ss_pred             hhHhhh--ccCCcccchhhhhhHHHHhhCCCCCch----HHHHHHhhhccCCc---------------------------
Confidence            999997  567889999999999999999999986    22222222111111                           


Q ss_pred             chhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCCCCC-----
Q 025467          161 SRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLT-----  235 (252)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~t-----  235 (252)
                                                                         ...+..+.+++..++..+|..|..     
T Consensus       208 ---------------------------------------------------~~l~~~a~~~~~~l~~r~p~nrLg~~~~~  236 (612)
T KOG0603|consen  208 ---------------------------------------------------RELSAEARSLFRQLFKRNPENRLGAGPDG  236 (612)
T ss_pred             ---------------------------------------------------hhhhHHHHHHHHHHHhhCHHHHhccCcch
Confidence                                                               223457888999999999999986     


Q ss_pred             HHHHHcCCCCCCc
Q 025467          236 AREALRHPFFTRD  248 (252)
Q Consensus       236 a~e~l~hpwf~~~  248 (252)
                      +.|+++|+||...
T Consensus       237 ~~eik~h~f~~~i  249 (612)
T KOG0603|consen  237 VDEIKQHEFFQSI  249 (612)
T ss_pred             hHHHhccchheee
Confidence            5799999999764

>smart00221 STYKc Protein kinase; unclassified specificity

Probab=99.61  E-value=1e-15  Score=120.06  Aligned_cols=88  Identities=40%  Similarity=0.655  Sum_probs=70.8

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCC----CccccC
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ----NYIVST   76 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~----~~~~~t   76 (252)
                      +|.+||+++++|+|+++.||+++.                           ...++++|||.+.......    ....++
T Consensus       110 ~l~~lh~~~i~h~di~~~ni~v~~---------------------------~~~~~l~d~g~~~~~~~~~~~~~~~~~~~  162 (225)
T smart00221      110 ALEYLHSLGIVHRDLKPENILLGM---------------------------DGLVKLADFGLARFIHRDLAALLKTVKGT  162 (225)
T ss_pred             HHHHHHhCCeecCCCCHHHEEEcC---------------------------CCCEEEeeCceeeEecCcccccccceecc
Confidence            478999999999999999999944                           3456777777765543322    234567


Q ss_pred             CCcccchhh-hcCCCCccchhHhHHHHHHHHHhCCCCCCC
Q 025467           77 RHYRAPEVI-LGLGWTYPCDIWSVGCILVELCTGEALFQT  115 (252)
Q Consensus        77 ~~y~aPE~l-~~~~~~~~~Diws~G~~l~~l~~g~~pf~~  115 (252)
                      ..|++||.+ ....++.++|+|++|++++++++|+.||..
T Consensus       163 ~~~~~pe~~~~~~~~~~~~Dv~~lG~~~~~l~~g~~pf~~  202 (225)
T smart00221      163 PFYLAPEVLLGGKGYGEAVDIWSLGVILYELLWGPEPFSG  202 (225)
T ss_pred             CCcCCHhHhcCCCCCCchhhHHHHHHHHHHHHHCCCCccc
Confidence            789999998 555677899999999999999999999976

Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.

>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A

Probab=99.60  E-value=1.2e-16  Score=128.12  Aligned_cols=88  Identities=26%  Similarity=0.380  Sum_probs=58.0

Q ss_pred             hhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCCCccccCCCccc
Q 025467            2 FAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRA   81 (252)
Q Consensus         2 L~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~~~~~~t~~y~a   81 (252)
                      +++||+.|+||+||+|+|++++.+|.                           +.|+||+..............+..|.+
T Consensus       158 vA~Lh~~GlVHgdi~~~nfll~~~G~---------------------------v~Lg~F~~~~r~g~~~~~~~~~~~~~P  210 (288)
T PF14531_consen  158 VANLHSYGLVHGDIKPENFLLDQDGG---------------------------VFLGDFSSLVRAGTRYRCSEFPVAFTP  210 (288)
T ss_dssp             HHHHHHTTEEEST-SGGGEEE-TTS----------------------------EEE--GGGEEETTEEEEGGGS-TTTS-
T ss_pred             HHHHhhcceEecccceeeEEEcCCCC---------------------------EEEcChHHHeecCceeeccCCCcccCC
Confidence            57899999999999999999965554                           555555443332221111133467889


Q ss_pred             chhhhcC--------CCCccchhHhHHHHHHHHHhCCCCCCCC
Q 025467           82 PEVILGL--------GWTYPCDIWSVGCILVELCTGEALFQTH  116 (252)
Q Consensus        82 PE~l~~~--------~~~~~~Diws~G~~l~~l~~g~~pf~~~  116 (252)
                      ||.....        .++.+.|.|++|+++|.++++..||...
T Consensus       211 Pe~~~~~~~~~~~~~~~t~~~DaW~LG~~ly~lWC~~lPf~~~  253 (288)
T PF14531_consen  211 PELESCAGQFGQNNAPYTFATDAWQLGITLYSLWCGRLPFGLS  253 (288)
T ss_dssp             HHHHHHHTSCHHSEEEE-HHHHHHHHHHHHHHHHHSS-STCCC
T ss_pred             hhhhhhhcccCcccceeeeccCHHHHHHHHHHHHHccCCCCCC
Confidence            9987542        3678899999999999999999999643

>KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms]

Probab=99.58  E-value=4.2e-15  Score=121.27  Aligned_cols=94  Identities=22%  Similarity=0.353  Sum_probs=67.6

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCC---------CCC
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERP---------DQN   71 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~---------~~~   71 (252)
                      |..|||++||+|||+|.+|||+..+.                       +.-..+.+.|||.+-....         ..-
T Consensus       353 av~hL~~hgvAhRDlKSDNiL~Eldd-----------------------D~~P~LVvaDFGCcLAd~~hGlqlpy~S~~V  409 (598)
T KOG4158|consen  353 AVTHLHKHGVAHRDLKSDNILLELDD-----------------------DEIPQLVVADFGCCLADDNHGLQLPYESDEV  409 (598)
T ss_pred             HHHHHHHccchhhcccccceEEEecC-----------------------CCCcEEEEcccceeeeccccccccccccccc
Confidence            46799999999999999999997653                       3334456667765432111         111


Q ss_pred             ccccCCCcccchhhhcCC-----C-CccchhHhHHHHHHHHHhCCCCCCCCC
Q 025467           72 YIVSTRHYRAPEVILGLG-----W-TYPCDIWSVGCILVELCTGEALFQTHE  117 (252)
Q Consensus        72 ~~~~t~~y~aPE~l~~~~-----~-~~~~Diws~G~~l~~l~~g~~pf~~~~  117 (252)
                      ...|+-..||||+....+     . -.++|.|+.|.+.||++....||.+..
T Consensus       410 d~GGNa~lmAPEi~ta~PGp~avvny~kAD~WA~GalaYEIfg~~NPFY~rG  461 (598)
T KOG4158|consen  410 DLGGNAKLMAPEIATAVPGPNAVVNYEKADTWAAGALAYEIFGRSNPFYKRG  461 (598)
T ss_pred             cCCCcceecchhhhhcCCCCceeeccchhhhhhhhhhHHHHhccCCcccccc
Confidence            135667789999986432     1 257899999999999999999997643

>KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis]

Probab=99.56  E-value=5e-15  Score=124.55  Aligned_cols=83  Identities=30%  Similarity=0.469  Sum_probs=61.8

Q ss_pred             cCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCCCccccCCCcccchhhhc
Q 025467            8 LCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILG   87 (252)
Q Consensus         8 ~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~~~~~~t~~y~aPE~l~~   87 (252)
                      +|.+|+|+||.||.+..+...+|+|||+.......++...                  .....+..+||..||+||.+.+
T Consensus       375 k~~ihrdlkp~nif~~~d~q~kIgDFgl~ts~~~~~~~~~------------------~~a~~t~~~gt~~YmsPEQi~g  436 (516)
T KOG1033|consen  375 KGLIHRDLKPSNIFFSDDDQLKIGDFGLVTSQDKDETVAP------------------AAASHTQQVGTLLYMSPEQIRG  436 (516)
T ss_pred             ccchhhhccccccccccchhhhhhhhhheeecccCCcccc------------------hhhhhhhcccccccCCHHHHhh
Confidence            7889999999999997777767766665433322220000                  0011223479999999999999


Q ss_pred             CCCCccchhHhHHHHHHHHHh
Q 025467           88 LGWTYPCDIWSVGCILVELCT  108 (252)
Q Consensus        88 ~~~~~~~Diws~G~~l~~l~~  108 (252)
                      ..|+.++||||||+++++++.
T Consensus       437 ~~y~~kvdIyaLGlil~EL~~  457 (516)
T KOG1033|consen  437 QQYSEKVDIYALGLILAELLI  457 (516)
T ss_pred             hhhhhhcchhhHHHHHHHHHH
Confidence            999999999999999999987

>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]

Probab=99.53  E-value=5.5e-14  Score=115.75  Aligned_cols=91  Identities=40%  Similarity=0.590  Sum_probs=71.9

Q ss_pred             hhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCC---------CCc
Q 025467            2 FAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD---------QNY   72 (252)
Q Consensus         2 L~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~---------~~~   72 (252)
                      |+|+|+.+++|||+||+||++...+.                          .++++|||.+......         ...
T Consensus       114 l~~~H~~~~~hrd~kp~nil~~~~~~--------------------------~~~l~dfg~~~~~~~~~~~~~~~~~~~~  167 (384)
T COG0515         114 LEYLHSKGIIHRDIKPENILLDRDGR--------------------------VVKLIDFGLAKLLPDPGSTSSIPALPST  167 (384)
T ss_pred             HHHHHhCCeeccCCCHHHeeecCCCC--------------------------eEEEeccCcceecCCCCccccccccccc
Confidence            57999999999999999999954331                          4667777766532221         234


Q ss_pred             cccCCCcccchhhhc---CCCCccchhHhHHHHHHHHHhCCCCCCCCCh
Q 025467           73 IVSTRHYRAPEVILG---LGWTYPCDIWSVGCILVELCTGEALFQTHEN  118 (252)
Q Consensus        73 ~~~t~~y~aPE~l~~---~~~~~~~Diws~G~~l~~l~~g~~pf~~~~~  118 (252)
                      ..|+..|++||.+.+   ..+....|+|++|++++++++|..||.....
T Consensus       168 ~~~t~~~~~pe~~~~~~~~~~~~~~D~~s~g~~~~~~~~~~~p~~~~~~  216 (384)
T COG0515         168 SVGTPGYMAPEVLLGLSLAYASSSSDIWSLGITLYELLTGLPPFEGEKN  216 (384)
T ss_pred             cccccccCCHHHhcCCCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCc
Confidence            578999999999987   4678999999999999999999999876553

>KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]

Probab=99.30  E-value=5.6e-12  Score=104.81  Aligned_cols=96  Identities=25%  Similarity=0.330  Sum_probs=74.7

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCcc--ccCC-C--------
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT--YERP-D--------   69 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~--~~~~-~--------   69 (252)
                      ||++||+.|++||||||.|+++.....                      .....+.+.|||+++  .... .        
T Consensus       134 ~l~~lH~~G~iHRDiKp~N~~~g~~~~----------------------~~~~~~~llDfGlar~~~~~~~~~~~~~~~r  191 (322)
T KOG1164|consen  134 ALEDLHSKGFIHRDIKPENFVVGQSSR----------------------SEVRTLYLLDFGLARRFKYVGDSGGNLRPPR  191 (322)
T ss_pred             HHHHHHhcCcccCCcCHHHeeecCCCC----------------------cccceEEEEecCCCccccccCCCCcccccCC
Confidence            588999999999999999999965320                      112457888888887  2110 0        


Q ss_pred             --CCccccCCCcccchhhhcCCCCccchhHhHHHHHHHHHhCCCCCCCCCh
Q 025467           70 --QNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHEN  118 (252)
Q Consensus        70 --~~~~~~t~~y~aPE~l~~~~~~~~~Diws~G~~l~~l~~g~~pf~~~~~  118 (252)
                        .....||..|.++.+..+...+.+-|+||++.++.++..|..|+.+...
T Consensus       192 ~~~~~~rGT~ry~S~~~H~~~e~~r~DDles~~Y~l~el~~g~LPW~~~~~  242 (322)
T KOG1164|consen  192 PQKGLFRGTLRYASINVHLGIEQGRRDDLESLFYMLLELLKGSLPWEALEM  242 (322)
T ss_pred             CCccCCCCccccccHHHhCCCccCCchhhhhHHHHHHHHhcCCCCCccccc
Confidence              1123489999999999888889999999999999999999999876553

>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]

Probab=99.26  E-value=1.5e-12  Score=115.57  Aligned_cols=147  Identities=24%  Similarity=0.416  Sum_probs=102.7

Q ss_pred             Chhhhh-ccCccccCCCCCCeEeecCC-ccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCC-CC-----Cc
Q 025467            1 MFAVMH-DLCMIHTDLKPENVLLVSSE-YIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERP-DQ-----NY   72 (252)
Q Consensus         1 aL~~lH-~~~ivHrdlk~~Nil~~~~~-~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~-~~-----~~   72 (252)
                      +|.|+| ..++.|+|+||+|.+++..+ ..++.                           |||+|..... ..     ..
T Consensus       135 ~l~~~H~~~~~~h~~ikP~n~~l~~s~~~l~~~---------------------------df~~At~~~~~~g~~~~~~~  187 (601)
T KOG0590|consen  135 GLSYLHPENGVTHRDIKPSNSLLDESGSALKIA---------------------------DFGLATAYRNKNGAERSLKD  187 (601)
T ss_pred             CccccCcccccccCCCCCccchhccCCCcccCC---------------------------CchhhccccccCCcceeeec
Confidence            578999 89999999999999997665 44444                           4444433222 11     11


Q ss_pred             ccc-CCCcccchhhhcCCC-CccchhHhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHHHHHHhhc
Q 025467           73 IVS-TRHYRAPEVILGLGW-TYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRR  150 (252)
Q Consensus        73 ~~~-t~~y~aPE~l~~~~~-~~~~Diws~G~~l~~l~~g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~  150 (252)
                      .+| ++.|+|||...+..| .+..|+||.|+++..+++|..|.......+.         .                   
T Consensus       188 ~~g~s~~y~a~E~~~~~~~~~~~~d~~S~g~~l~~~~~g~~p~~~~~~~~~---------~-------------------  239 (601)
T KOG0590|consen  188 RCGSSPPYGAPEHLSGKAYRGPSVDVWSLGIVLSAMLTGELPWDFPSRKDG---------R-------------------  239 (601)
T ss_pred             ccCCCCCCCCcccccchhhcCCCcccccccccccccccCCCCccccccccc---------c-------------------
Confidence            367 889999999988544 6889999999999999999988653321110         0                   


Q ss_pred             CCCCCCccccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCC
Q 025467          151 GRLDWPEGAASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDP  230 (252)
Q Consensus       151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP  230 (252)
                       ...+.+..                                            ...-...+........+++.+++..+|
T Consensus       240 -~~~~~~~~--------------------------------------------~~~~~~~~~~~~~~~~~~l~k~l~~~~  274 (601)
T KOG0590|consen  240 -YSSWKSNK--------------------------------------------GRFTQLPWNSISDQAHDLLHKILKENP  274 (601)
T ss_pred             -ceeecccc--------------------------------------------cccccCccccCChhhhhcccccccCCc
Confidence             00000000                                            000012234556788999999999999


Q ss_pred             CCCCCHHHHHcCCCCCC
Q 025467          231 TDRLTAREALRHPFFTR  247 (252)
Q Consensus       231 ~~R~ta~e~l~hpwf~~  247 (252)
                      ..|.|.+++-.+||+..
T Consensus       275 ~~r~s~~~~~~d~~~~~  291 (601)
T KOG0590|consen  275 SNRLSIEELKLDNWLSS  291 (601)
T ss_pred             hhccccccccccccccc
Confidence            99999999999999987

>KOG1023 consensus Natriuretic peptide receptor, guanylate cyclase [Signal transduction mechanisms]

Probab=99.25  E-value=1.2e-11  Score=105.74  Aligned_cols=88  Identities=27%  Similarity=0.360  Sum_probs=64.8

Q ss_pred             ChhhhhccCc-cccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCC-----CCCccc
Q 025467            1 MFAVMHDLCM-IHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERP-----DQNYIV   74 (252)
Q Consensus         1 aL~~lH~~~i-vHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~-----~~~~~~   74 (252)
                      +|+|||+.-| .|+.++..|++++                           ..+.+|+.|||+......     ......
T Consensus        60 Gl~ylh~s~i~~hg~l~s~nClvd---------------------------~~w~lklt~~Gl~~~~~~~~~~~~~~~~~  112 (484)
T KOG1023|consen   60 GLAYLHNSPIGYHGALKSSNCLVD---------------------------SRWVLKLTDFGLNSLLEETAEPEAHHPIR  112 (484)
T ss_pred             HHHHHhcCcceeeeeeccccceee---------------------------eeEEEEechhhhcccccccccccccchhH
Confidence            5899998655 9999999999994                           455666666666544321     111112


Q ss_pred             cCCCcccchhhhcCC-------CCccchhHhHHHHHHHHHhCCCCCCC
Q 025467           75 STRHYRAPEVILGLG-------WTYPCDIWSVGCILVELCTGEALFQT  115 (252)
Q Consensus        75 ~t~~y~aPE~l~~~~-------~~~~~Diws~G~~l~~l~~g~~pf~~  115 (252)
                      -...|.|||.+....       .+.+.|+||+|++++++++...||..
T Consensus       113 ~~~lw~aPellr~~~~~~~~~~~~~~gdiYs~~ii~~ei~~r~~~~~~  160 (484)
T KOG1023|consen  113 KALLWTAPELLRGALSQSLESALTQKGDIYSFGIIMYEILFRSGPFDL  160 (484)
T ss_pred             HHHhccCHHHhcccccccccccccccCCeehHHHHHHHHHhccCcccc
Confidence            345789999997641       35678999999999999999999965

>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]

Probab=99.22  E-value=2.3e-11  Score=110.10  Aligned_cols=174  Identities=25%  Similarity=0.381  Sum_probs=118.3

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccC-------CCCCcc
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYER-------PDQNYI   73 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~-------~~~~~~   73 (252)
                      ++++||+..+.|+|++|.|++....+..++.+|+.........................++......       ......
T Consensus       916 s~e~L~s~~r~h~~~~p~~~l~~~~gh~~l~~~~t~~~vg~~~p~~~~sg~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~  995 (1205)
T KOG0606|consen  916 SLESLHSSLRKHRDLKPDSLLIAYDGHRPLTDFGTLSKVGLIPPTTDLSGPSSSGTPRRLSRSERRPQLSADEARRKHAV  995 (1205)
T ss_pred             hhhccccchhhcccccccchhhcccCCcccCccccccccccccCcCCcccccccCccccccccccccccccchhhccccc
Confidence            4689999999999999999999999999999988443321111000000000000111122111100       012235


Q ss_pred             ccCCCcccchhhhcCCCCccchhHhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHHHHHHhhcCCC
Q 025467           74 VSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRL  153 (252)
Q Consensus        74 ~~t~~y~aPE~l~~~~~~~~~Diws~G~~l~~l~~g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~  153 (252)
                      .+|+.|.+||.+.+..-...+|+|++|+++++.++|.+||.......++..|..                       +..
T Consensus       996 ~~t~~~laPe~~lg~~hgs~ad~~~~g~~l~e~l~g~pp~na~tpq~~f~ni~~-----------------------~~~ 1052 (1205)
T KOG0606|consen  996 VGTPDYLAPEILLGRRHGSAADWWSSGVCLFEVLTGIPPFNAETPQQIFENILN-----------------------RDI 1052 (1205)
T ss_pred             cCCCcccCCcccccccCCCcchhhhhhhhhhhhhcCCCCCCCcchhhhhhcccc-----------------------CCC
Confidence            789999999999999888999999999999999999999987665544433211                       122


Q ss_pred             CCCccccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCCC
Q 025467          154 DWPEGAASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDR  233 (252)
Q Consensus       154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R  233 (252)
                      .|+.+                                                    ....+.++.+++.++|..+|.+|
T Consensus      1053 ~~p~g----------------------------------------------------~~~~s~~aq~~~~~ll~~~~~qr 1080 (1205)
T KOG0606|consen 1053 PWPEG----------------------------------------------------PEEGSYEAQDLINRLLTEEPTQR 1080 (1205)
T ss_pred             CCCCC----------------------------------------------------ccccChhhhhhhhhhhccCchhc
Confidence            33322                                                    23456788999999999999999


Q ss_pred             CCHH---HHHcCCCCCCcc
Q 025467          234 LTAR---EALRHPFFTRDH  249 (252)
Q Consensus       234 ~ta~---e~l~hpwf~~~~  249 (252)
                      .+|.   ++-.||||+...
T Consensus      1081 ~~a~~~~e~k~~~~~~~~~ 1099 (1205)
T KOG0606|consen 1081 LGAKGAAEVKGHPFFQDVD 1099 (1205)
T ss_pred             cCcccccccccCCccCCCC
Confidence            9988   999999998764

>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]

Probab=99.18  E-value=5.9e-11  Score=92.89  Aligned_cols=48  Identities=25%  Similarity=0.309  Sum_probs=38.8

Q ss_pred             cCCCcccchhhhcCCC---CccchhHhHHHHHHHHHhCCCCCCCCChHHHH
Q 025467           75 STRHYRAPEVILGLGW---TYPCDIWSVGCILVELCTGEALFQTHENLEHL  122 (252)
Q Consensus        75 ~t~~y~aPE~l~~~~~---~~~~Diws~G~~l~~l~~g~~pf~~~~~~~~~  122 (252)
                      -.+.|++||.+...+-   -.++|+|||++++|++.|+..||......++-
T Consensus       348 y~pawmspealqrkped~n~raadmwsfaillwel~trevpfadlspmecg  398 (448)
T KOG0195|consen  348 YSPAWMSPEALQRKPEDLNIRAADMWSFAILLWELNTREVPFADLSPMECG  398 (448)
T ss_pred             cCcccCCHHHHhcCchhcchhhhhHHHHHHHHHHhhccccccccCCchhhh
Confidence            3678999999986542   25789999999999999999999876654443

>KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]

Probab=99.16  E-value=1.9e-11  Score=93.94  Aligned_cols=104  Identities=24%  Similarity=0.338  Sum_probs=78.7

Q ss_pred             hhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCC----------C
Q 025467            2 FAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ----------N   71 (252)
Q Consensus         2 L~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~----------~   71 (252)
                      ++|+|.++.+||||||+|+|.....                        -...+.++|||+|+..-...          .
T Consensus       124 iEyvH~r~fiHRDIKPdNFLMGlgr------------------------h~~kl~LIDFGLaKky~d~~t~~HIpyre~r  179 (341)
T KOG1163|consen  124 IEYVHLRNFIHRDIKPDNFLMGLGR------------------------HCNKLYLIDFGLAKKYRDIRTRQHIPYREDR  179 (341)
T ss_pred             HHHHHhhccccccCCccceeecccc------------------------ccceEEEEeccchhhhccccccccCccccCC
Confidence            6899999999999999999985431                        23457899999987543321          2


Q ss_pred             ccccCCCcccchhhhcCCCCccchhHhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHh
Q 025467           72 YIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVL  129 (252)
Q Consensus        72 ~~~~t~~y~aPE~l~~~~~~~~~Diws~G~~l~~l~~g~~pf~~~~~~~~~~~~~~~~  129 (252)
                      ..+||..|.+-....+..-+..-|+=|+|.++.++.-|..|+++.......+..+.+.
T Consensus       180 ~ltGTaRYASinAh~g~eqSRRDDmeSvgYvLmYfnrG~LPWQglka~tk~QKyEkI~  237 (341)
T KOG1163|consen  180 NLTGTARYASINAHLGIEQSRRDDMESVGYVLMYFNRGSLPWQGLKAATKKQKYEKIS  237 (341)
T ss_pred             ccceeeeehhhhhhhhhhhhhhhhhhhhcceeeeeecCCCcccccchhhHHHHHHHHH
Confidence            2578889988777766666778899999999999999999999876555554444443

>KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]

Probab=99.15  E-value=6.5e-11  Score=94.96  Aligned_cols=94  Identities=22%  Similarity=0.343  Sum_probs=78.2

Q ss_pred             hhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCCCc---------
Q 025467            2 FAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNY---------   72 (252)
Q Consensus         2 L~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~~~---------   72 (252)
                      ++++|++.+|.|||||+|+||...+.                      .....+.++|||+|+....+.+.         
T Consensus       137 ie~vH~k~LIYRDIKPdNFLIGrp~~----------------------k~~n~IhiiDFGmAK~YrDp~TkqHIPYrE~K  194 (449)
T KOG1165|consen  137 IEYVHEKDLIYRDIKPDNFLIGRPGT----------------------KDANVIHIIDFGMAKEYRDPKTKQHIPYREHK  194 (449)
T ss_pred             HHHHHhcceeecccCccceeecCCCC----------------------CCCceEEEEeccchhhhcCccccccCcccccc
Confidence            57899999999999999999976542                      45667899999999865444322         


Q ss_pred             -cccCCCcccchhhhcCCCCccchhHhHHHHHHHHHhCCCCCCCCC
Q 025467           73 -IVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHE  117 (252)
Q Consensus        73 -~~~t~~y~aPE~l~~~~~~~~~Diws~G~~l~~l~~g~~pf~~~~  117 (252)
                       ..||..||+-....+..-+.+-|+=|+|-++.+++-|..|+++-.
T Consensus       195 SLsGTARYMSINTHlGrEQSRRDDLEaLGHvFmYFLRGsLPWQGLK  240 (449)
T KOG1165|consen  195 SLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLK  240 (449)
T ss_pred             ccccceeeeEeeccccchhhhhhhHHHhhhhhhhhccCCCcccccc
Confidence             478999999888888777888999999999999999999998753

>PRK12274 serine/threonine protein kinase; Provisional

Probab=99.14  E-value=6.5e-11  Score=90.86  Aligned_cols=90  Identities=19%  Similarity=0.182  Sum_probs=62.2

Q ss_pred             ChhhhhccCccccCC-CCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCCCc-------
Q 025467            1 MFAVMHDLCMIHTDL-KPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNY-------   72 (252)
Q Consensus         1 aL~~lH~~~ivHrdl-k~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~~~-------   72 (252)
                      +|+++|++||+|||| ||.|||++.+                           +.++|+|||++.........       
T Consensus       103 ~L~~lH~~GIvHrDL~kp~NILv~~~---------------------------g~i~LIDFG~A~~~~~~~~~~r~L~~r  155 (218)
T PRK12274        103 LLQQLHRCGVAHNDLAKEANWLVQED---------------------------GSPAVIDFQLAVRGNPRARWMRLLARE  155 (218)
T ss_pred             HHHHHHHCcCccCCCCCcceEEEcCC---------------------------CCEEEEECCCceecCCcchHHHHHHHH
Confidence            578999999999999 7999999543                           34677777777643332210       


Q ss_pred             ---------cccCCCcccchhhhcC-CCC-ccchhHhHHHHHHHHHhCCCCCCCCC
Q 025467           73 ---------IVSTRHYRAPEVILGL-GWT-YPCDIWSVGCILVELCTGEALFQTHE  117 (252)
Q Consensus        73 ---------~~~t~~y~aPE~l~~~-~~~-~~~Diws~G~~l~~l~~g~~pf~~~~  117 (252)
                               ...++.|++|+.-... ..+ ...+..+.|+-+|.++|+..+..++.
T Consensus       156 Dl~~llk~~~~y~~~~l~~~~~~~l~~~~~~~~~w~~~g~~~~~~~~~~~~~~~~~  211 (218)
T PRK12274        156 DLRHLLKHKRMYCPAALTPVERRVLKRTSWIRELWFATGKPVYRFVTRRVLHWEDN  211 (218)
T ss_pred             HHHHHHHHHHhcCCCCCCHHHHhhhccchhHHHHHHHhcchHHHHHhccCCccccC
Confidence                     1235566677654322 334 45566699999999999998876554

>PRK09188 serine/threonine protein kinase; Provisional

Probab=99.09  E-value=6e-11  Score=99.30  Aligned_cols=60  Identities=25%  Similarity=0.372  Sum_probs=43.1

Q ss_pred             ChhhhhccCccccCC-CCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCC---------
Q 025467            1 MFAVMHDLCMIHTDL-KPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ---------   70 (252)
Q Consensus         1 aL~~lH~~~ivHrdl-k~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~---------   70 (252)
                      ||+|||++||+|||| ||+|||++.++                           .++|+|||+++......         
T Consensus       123 aL~~lH~~gIiHrDL~KP~NILv~~~~---------------------------~ikLiDFGlA~~~~~~~~~~~~~~~~  175 (365)
T PRK09188        123 ALRDLHRAGITHNDLAKPQNWLMGPDG---------------------------EAAVIDFQLASVFRRRGALYRIAAYE  175 (365)
T ss_pred             HHHHHHHCCCeeCCCCCcceEEEcCCC---------------------------CEEEEECccceecccCcchhhhhhhh
Confidence            689999999999999 99999995433                           45666666665332211         


Q ss_pred             --CccccCCCcccchhhhc
Q 025467           71 --NYIVSTRHYRAPEVILG   87 (252)
Q Consensus        71 --~~~~~t~~y~aPE~l~~   87 (252)
                        ....+++.|+|||.+..
T Consensus       176 d~~~~~~~~~~~~pe~~~~  194 (365)
T PRK09188        176 DLRHLLKHKRTYAPDALTP  194 (365)
T ss_pred             hhhhhhccCccCCcccCCh
Confidence              22456778999998863

>KOG2137 consensus Protein kinase [Signal transduction mechanisms]

Probab=99.02  E-value=1.7e-10  Score=100.65  Aligned_cols=161  Identities=20%  Similarity=0.314  Sum_probs=107.9

Q ss_pred             Chhhhhc-cCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCCCccccCCCc
Q 025467            1 MFAVMHD-LCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHY   79 (252)
Q Consensus         1 aL~~lH~-~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~~~~~~t~~y   79 (252)
                      ||.|+|. .++||+.|.|++|.++..+.+|++.|+++........+ +       +..-|+++       .........|
T Consensus       111 gl~flh~sAk~VH~ni~p~~i~~na~~~wkl~Gf~f~v~~~~~~~~-p-------~~~yd~~l-------p~~~~~~~~f  175 (700)
T KOG2137|consen  111 GLAFLHRSAKVVHGNIQPEAIVVNANGDWKLAGFSFCVNANGPTEY-P-------FSEYDPPL-------PLLLQPHLNF  175 (700)
T ss_pred             hhhhhccCcceeecccchhheeeccCcceeeccchhhhccCCCCcc-c-------cccCCCCC-------ChhhccCccc
Confidence            6889997 68999999999999999998888888776544332221 1       11111111       1112345579


Q ss_pred             ccchhhhcCCCCccchhHhHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHHHHHHhhcCCCCCCcc
Q 025467           80 RAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEG  158 (252)
Q Consensus        80 ~aPE~l~~~~~~~~~Diws~G~~l~~l~~-g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~  158 (252)
                      .|||++.+.....++|++|+||.+|.++. |+..+.+....... ......+...                  ..     
T Consensus       176 ~apE~~~~~~~~~~sd~fSlG~li~~i~~~gk~i~~a~~~~~~~-~~~~~~~~~~------------------~~-----  231 (700)
T KOG2137|consen  176 LAPEYLLGTTNTPASDVFSLGVLIYTIYNGGKSIIAANGGLLSY-SFSRNLLNAG------------------AF-----  231 (700)
T ss_pred             ccchhhccccccccccceeeeeEEEEEecCCcchhhccCCcchh-hhhhcccccc------------------cc-----
Confidence            99999998778899999999999999984 55555443221111 1111100000                  00     


Q ss_pred             ccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCCCCCHHH
Q 025467          159 AASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTARE  238 (252)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~ta~e  238 (252)
                                                                        .....++.++++=|.++|..++..||++.+
T Consensus       232 --------------------------------------------------~~s~~~p~el~~~l~k~l~~~~~~rp~~~~  261 (700)
T KOG2137|consen  232 --------------------------------------------------GYSNNLPSELRESLKKLLNGDSAVRPTLDL  261 (700)
T ss_pred             --------------------------------------------------cccccCcHHHHHHHHHHhcCCcccCcchhh
Confidence                                                              000345678899999999999999999999


Q ss_pred             HHcCCCCCCccc
Q 025467          239 ALRHPFFTRDHL  250 (252)
Q Consensus       239 ~l~hpwf~~~~~  250 (252)
                      ++..|||.+...
T Consensus       262 l~~~~ff~D~~~  273 (700)
T KOG2137|consen  262 LLSIPFFSDPGL  273 (700)
T ss_pred             hhcccccCCchh
Confidence            999999988643

>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional

Probab=98.98  E-value=9.6e-11  Score=91.58  Aligned_cols=69  Identities=14%  Similarity=0.256  Sum_probs=49.1

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCCCccccCCCcc
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYR   80 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~~~~~~t~~y~   80 (252)
                      +|..+|+.|++|||++|+||+++.                           .+ ++++|||..........         
T Consensus       147 ~l~~lH~~gi~H~Dikp~Nili~~---------------------------~g-i~liDfg~~~~~~e~~a---------  189 (232)
T PRK10359        147 SIESLHQHGMVSGDPHKGNFIVSK---------------------------NG-LRIIDLSGKRCTAQRKA---------  189 (232)
T ss_pred             HHHHHHHcCCccCCCChHHEEEeC---------------------------CC-EEEEECCCcccccchhh---------
Confidence            478899999999999999999943                           33 78899987654322111         


Q ss_pred             cchhhhcCCCCccchhHhHHHHHHHH
Q 025467           81 APEVILGLGWTYPCDIWSVGCILVEL  106 (252)
Q Consensus        81 aPE~l~~~~~~~~~Diws~G~~l~~l  106 (252)
                      ....+....|..++|+|++|+++..+
T Consensus       190 ~d~~vler~y~~~~di~~lg~~~~~~  215 (232)
T PRK10359        190 KDRIDLERHYGIKNEIKDLGYYLLIY  215 (232)
T ss_pred             HHHHHHHhHhcccccccceeEeehHH
Confidence            01133344567789999999987654

>KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=98.98  E-value=6.6e-10  Score=101.85  Aligned_cols=90  Identities=24%  Similarity=0.397  Sum_probs=71.1

Q ss_pred             hhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCC-----CccccC
Q 025467            2 FAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ-----NYIVST   76 (252)
Q Consensus         2 L~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~-----~~~~~t   76 (252)
                      +++||.++|||+||||+|+|+...-...                    .....++|+|||.+-.+.-..     ....+|
T Consensus       807 ve~lH~~~IIHgDiKPDNfll~~~~~~~--------------------~~~~~l~lIDfG~siDm~lfp~~~~F~~~~~t  866 (974)
T KOG1166|consen  807 VEHLHAMGIIHGDIKPDNFLLRREICAD--------------------SDSKGLYLIDFGRSIDMKLFPDGTKFKAVWHT  866 (974)
T ss_pred             HHHHHhcceecccCCcceeEeecccCCC--------------------CcccceEEEecccceeeeEcCCCcEEeeeecc
Confidence            5789999999999999999995431110                    224568999999986433221     124678


Q ss_pred             CCcccchhhhcCCCCccchhHhHHHHHHHHHhCCC
Q 025467           77 RHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEA  111 (252)
Q Consensus        77 ~~y~aPE~l~~~~~~~~~Diws~G~~l~~l~~g~~  111 (252)
                      -.+-++|...|.+++..+|.+.++.+++.|+.|+.
T Consensus       867 d~f~C~EM~~grpWtYq~DyfGlAa~~h~mLFG~y  901 (974)
T KOG1166|consen  867 DLFDCIEMREGRPWTYQIDYFGLAATVHVMLFGKY  901 (974)
T ss_pred             ccchhHHHhcCCCCchhhhhHHHHHHHHHHHHHHH
Confidence            88999999999999999999999999999999853

>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]

Probab=98.85  E-value=2.4e-09  Score=92.03  Aligned_cols=96  Identities=24%  Similarity=0.338  Sum_probs=67.3

Q ss_pred             ChhhhhccCccccCCCCCCeEeecC-CccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCCCccccCCCc
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSS-EYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHY   79 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~-~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~~~~~~t~~y   79 (252)
                      ||.++|+.+|+|-|+||.||+...+ ..++++||++...                  +.+.++......... .-|...|
T Consensus       234 al~~~hs~~~~~~~~kp~~i~~~~~~~s~~~~df~~v~~------------------i~~~~~~~~~~~~~r-~~~~~~Y  294 (524)
T KOG0601|consen  234 ALSHLHSNNIVHDDLKPANIFTTSDWTSCKLTDFGLVSK------------------ISDGNFSSVFKVSKR-PEGDCIY  294 (524)
T ss_pred             cccccCCCcccccccchhheecccccceeecCCcceeEE------------------ccCCccccceeeeec-CCCCceE
Confidence            7899999999999999999999877 6666666654322                  222222211111111 1345569


Q ss_pred             ccchhhhcCCCCccchhHhHHHHHHHHHhCCCCCCCC
Q 025467           80 RAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTH  116 (252)
Q Consensus        80 ~aPE~l~~~~~~~~~Diws~G~~l~~l~~g~~pf~~~  116 (252)
                      ++||++.+ .++...|++++|.++.+..++..+....
T Consensus       295 ~~ke~~~~-l~~~~~di~sl~ev~l~~~l~~~~~~~g  330 (524)
T KOG0601|consen  295 AAKELLNG-LATFASDIFSLGEVILEAILGSHLPSVG  330 (524)
T ss_pred             eChhhhcc-ccchHhhhcchhhhhHhhHhhcccccCC
Confidence            99999865 5678899999999999998888776544

>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain

Probab=98.65  E-value=1.2e-08  Score=78.29  Aligned_cols=38  Identities=21%  Similarity=0.441  Sum_probs=31.2

Q ss_pred             Chhhh-hccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCcccc
Q 025467            1 MFAVM-HDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYE   66 (252)
Q Consensus         1 aL~~l-H~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~   66 (252)
                      ||+++ |+.||+||||||+|||++                            ++.++++|||++...
T Consensus       129 ~L~~l~H~~giiHrDlkP~NIli~----------------------------~~~v~LiDFG~a~~~  167 (190)
T cd05147         129 IMRILYQDCRLVHADLSEYNLLYH----------------------------DGKLYIIDVSQSVEH  167 (190)
T ss_pred             HHHHHHHhCCcccCCCCHHHEEEE----------------------------CCcEEEEEccccccC
Confidence            57898 799999999999999994                            234789999987643

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c

>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain

Probab=98.62  E-value=1.7e-08  Score=77.44  Aligned_cols=23  Identities=22%  Similarity=0.314  Sum_probs=21.3

Q ss_pred             Chhhhhc-cCccccCCCCCCeEee
Q 025467            1 MFAVMHD-LCMIHTDLKPENVLLV   23 (252)
Q Consensus         1 aL~~lH~-~~ivHrdlk~~Nil~~   23 (252)
                      ||.++|+ .||+||||||+||+++
T Consensus       129 ~l~~lH~~~givHrDlkP~NIll~  152 (190)
T cd05145         129 QMRRLYQEAGLVHGDLSEYNILYH  152 (190)
T ss_pred             HHHHHHHhCCEecCCCChhhEEEE
Confidence            5789999 9999999999999994

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro

>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed

Probab=98.46  E-value=1.1e-07  Score=75.61  Aligned_cols=38  Identities=32%  Similarity=0.506  Sum_probs=31.8

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccc
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTY   65 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~   65 (252)
                      +|.+||+.||+||||||.|||++.                           ...++++|||.+..
T Consensus       154 ~l~~lH~~GI~HrDlkp~NILv~~---------------------------~~~v~LIDfg~~~~  191 (239)
T PRK01723        154 LIARFHDAGVYHADLNAHNILLDP---------------------------DGKFWLIDFDRGEL  191 (239)
T ss_pred             HHHHHHHCCCCCCCCCchhEEEcC---------------------------CCCEEEEECCCccc
Confidence            478999999999999999999943                           34688999987654

>PRK10345 hypothetical protein; Provisional

Probab=98.44  E-value=1e-07  Score=74.11  Aligned_cols=22  Identities=27%  Similarity=0.460  Sum_probs=20.7

Q ss_pred             hhhhccCccccCCCCCCeEeec
Q 025467            3 AVMHDLCMIHTDLKPENVLLVS   24 (252)
Q Consensus         3 ~~lH~~~ivHrdlk~~Nil~~~   24 (252)
                      +|||+++|+||||||+|||+..
T Consensus       119 ~yLh~~~IvhrDlKp~NILl~~  140 (210)
T PRK10345        119 RYLLDNRIVTMELKPQNILCQR  140 (210)
T ss_pred             HHHHHCCEeecCCCHHHEEEec
Confidence            8999999999999999999964

>smart00090 RIO RIO-like kinase

Probab=98.32  E-value=2.5e-07  Score=73.47  Aligned_cols=37  Identities=19%  Similarity=0.307  Sum_probs=31.4

Q ss_pred             ChhhhhccC-ccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccc
Q 025467            1 MFAVMHDLC-MIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTY   65 (252)
Q Consensus         1 aL~~lH~~~-ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~   65 (252)
                      ||++||++| |+||||||+||++.                            ...++++|||.+..
T Consensus       160 ~l~~LH~~g~iiH~Dikp~NIli~----------------------------~~~i~LiDFg~a~~  197 (237)
T smart00090      160 EMRKLYKEGELVHGDLSEYNILVH----------------------------DGKVVIIDVSQSVE  197 (237)
T ss_pred             HHHHHHhcCCEEeCCCChhhEEEE----------------------------CCCEEEEEChhhhc
Confidence            578999999 99999999999994                            33578999998764

>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain

Probab=98.30  E-value=5.1e-07  Score=69.73  Aligned_cols=39  Identities=23%  Similarity=0.265  Sum_probs=31.6

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCcccc
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYE   66 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~   66 (252)
                      ++.++|+.||+||||+|+||+++                           ....++++|||.+...
T Consensus       137 ~l~~lh~~gi~H~Dl~p~Nill~---------------------------~~~~~~liDfg~~~~~  175 (198)
T cd05144         137 EIVKAYKHGIIHGDLSEFNILVD---------------------------DDEKIYIIDWPQMVST  175 (198)
T ss_pred             HHHHHHHCCCCcCCCCcccEEEc---------------------------CCCcEEEEECCccccC
Confidence            46789999999999999999994                           3446788888877543

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom

>PRK14879 serine/threonine protein kinase; Provisional

Probab=98.25  E-value=9.2e-07  Score=68.87  Aligned_cols=23  Identities=30%  Similarity=0.573  Sum_probs=21.3

Q ss_pred             ChhhhhccCccccCCCCCCeEee
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLV   23 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~   23 (252)
                      +|.++|+.|++|+|++|.|||+.
T Consensus       107 ~l~~lH~~~i~H~Dl~p~Nil~~  129 (211)
T PRK14879        107 LVGKLHSAGIIHGDLTTSNMILS  129 (211)
T ss_pred             HHHHHHhCCcccCCCCcccEEEE
Confidence            47899999999999999999994

>KOG1266 consensus Protein kinase [Signal transduction mechanisms]

Probab=98.22  E-value=1.9e-06  Score=69.82  Aligned_cols=90  Identities=19%  Similarity=0.258  Sum_probs=53.5

Q ss_pred             ChhhhhccC--ccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCCC-ccccCC
Q 025467            1 MFAVMHDLC--MIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQN-YIVSTR   77 (252)
Q Consensus         1 aL~~lH~~~--ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~~-~~~~t~   77 (252)
                      ||.|||+..  |+|+++..+.|++..++-.+++.--...             ....+..+        ..... .-.+-+
T Consensus       188 al~yLhs~~PpiihgnlTc~tifiq~ngLIkig~~ap~s-------------~h~s~~~~--------~~~Ek~~~~~~~  246 (458)
T KOG1266|consen  188 ALSYLHSCDPPIIHGNLTCDTIFIQHNGLIKIGSVAPDS-------------THPSVNST--------REAEKSVNTSLP  246 (458)
T ss_pred             hhhhhhccCCccccCCcchhheeecCCceEEecccCccc-------------cchhhhhh--------hHhhhhccccCC
Confidence            689999975  9999999999998544432222100000             00000000        00000 013456


Q ss_pred             CcccchhhhcCCCCccchhHhHHHHHHHHHhCCC
Q 025467           78 HYRAPEVILGLGWTYPCDIWSVGCILVELCTGEA  111 (252)
Q Consensus        78 ~y~aPE~l~~~~~~~~~Diws~G~~l~~l~~g~~  111 (252)
                      +|.+||.-.......++|||++|....+|..+..
T Consensus       247 g~~a~~sg~~tn~~~a~dIy~fgmcAlemailEi  280 (458)
T KOG1266|consen  247 GFSAPESGTTTNTTGASDIYKFGMCALEMAILEI  280 (458)
T ss_pred             ccccCCcCcccccccchhhhhhhHHHHHHHHhee
Confidence            7888887665567788999999988888877654

>TIGR03724 arch_bud32 Kae1-associated kinase Bud32

Probab=98.20  E-value=1.1e-06  Score=67.89  Aligned_cols=38  Identities=26%  Similarity=0.590  Sum_probs=31.6

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCcccc
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYE   66 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~   66 (252)
                      +|.+||+.|++|+|++|.||++.                            ...++++|||.+...
T Consensus       102 ~l~~lH~~gi~H~Dl~~~Nil~~----------------------------~~~~~liDfg~a~~~  139 (199)
T TIGR03724       102 LVGKLHKAGIVHGDLTTSNIIVR----------------------------DDKLYLIDFGLGKYS  139 (199)
T ss_pred             HHHHHHHCCeecCCCCcceEEEE----------------------------CCcEEEEECCCCcCC
Confidence            47899999999999999999994                            345788899887653

Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.

>cd05119 RIO RIO kinase family, catalytic domain

Probab=98.17  E-value=1.2e-06  Score=66.93  Aligned_cols=23  Identities=22%  Similarity=0.369  Sum_probs=21.1

Q ss_pred             Chhhhhc-cCccccCCCCCCeEee
Q 025467            1 MFAVMHD-LCMIHTDLKPENVLLV   23 (252)
Q Consensus         1 aL~~lH~-~~ivHrdlk~~Nil~~   23 (252)
                      ++.++|+ .||+|+||||+||+++
T Consensus       126 ~l~~lh~~~~ivH~Dl~p~Nili~  149 (187)
T cd05119         126 LMRKLYREAGLVHGDLSEYNILVD  149 (187)
T ss_pred             HHHHHhhccCcCcCCCChhhEEEE
Confidence            4788999 9999999999999994

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct

>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]

Probab=97.96  E-value=3.7e-06  Score=72.80  Aligned_cols=87  Identities=28%  Similarity=0.327  Sum_probs=57.8

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCCCcccc-CCCc
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVS-TRHY   79 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~~~~~~-t~~y   79 (252)
                      ||.++|++.++|+|++|+||++..++                          ...++.||+.+....-......+ +..|
T Consensus       378 ~l~~i~s~~~~~~d~~psni~i~~~~--------------------------~~~~~~~~~~~t~~~~~~~~~~~~~r~~  431 (524)
T KOG0601|consen  378 ALNVIHSKLFVHLDVKPSNILISNDG--------------------------FFSKLGDFGCWTRLAFSSGVFHHIDRLY  431 (524)
T ss_pred             ccccccchhhhcccccccceeeccch--------------------------hhhhccccccccccceeccccccccccc
Confidence            57899999999999999999996642                          22345555554321111111112 2233


Q ss_pred             -ccchhhhcCCCCccchhHhHHHHHHHHHhCCCCC
Q 025467           80 -RAPEVILGLGWTYPCDIWSVGCILVELCTGEALF  113 (252)
Q Consensus        80 -~aPE~l~~~~~~~~~Diws~G~~l~~l~~g~~pf  113 (252)
                       .++.......+..++|++++|+.+.+.+++.+.-
T Consensus       432 p~~~~~~e~~~~~~~~~~~sl~~~~~e~~~~~~ls  466 (524)
T KOG0601|consen  432 PIAEILLEDYPHLSKADIFSLGLSVDEAITGSPLS  466 (524)
T ss_pred             ccchhhccccccccccccccccccccccccCcccC
Confidence             2555555567889999999999999998887553

>COG4248 Uncharacterized protein with protein kinase and helix-hairpin-helix DNA-binding domains [General function prediction only]

Probab=97.95  E-value=2.3e-05  Score=65.90  Aligned_cols=91  Identities=15%  Similarity=0.224  Sum_probs=63.0

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCCCccccCCCcc
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYR   80 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~~~~~~t~~y~   80 (252)
                      |++-||.+|.+-+|+.++|+|++.++.+.+.|..                   ...|++=|.      .....+|...|+
T Consensus       129 aFA~lH~~Gh~vGDVn~~~~lVsd~~~V~LVdsD-------------------sfqi~~ng~------~~~cpVg~~eft  183 (637)
T COG4248         129 AFATLHEHGHVVGDVNQNSFLVSDDSKVVLVDSD-------------------SFQINANGT------LHLCPVGVSEFT  183 (637)
T ss_pred             HHHHHHhcCCcccccCccceeeecCceEEEEccc-------------------ceeeccCCc------eEecccCccccC
Confidence            3567999999999999999999776655443321                   112221111      111236788899


Q ss_pred             cchhhhcC-----CCCccchhHhHHHHHHHHHhC-CCCCCCC
Q 025467           81 APEVILGL-----GWTYPCDIWSVGCILVELCTG-EALFQTH  116 (252)
Q Consensus        81 aPE~l~~~-----~~~~~~Diws~G~~l~~l~~g-~~pf~~~  116 (252)
                      +||...-.     .-....|.+.+||++++++.| +.||.+.
T Consensus       184 PPElQ~~~sf~g~~r~~~hD~FGLavLiF~lL~ggrHPysGI  225 (637)
T COG4248         184 PPELQTLPSFVGFERTANHDNFGLAVLIFHLLFGGRHPYSGI  225 (637)
T ss_pred             CHHHhccccccccCCCccccchhHHHHHHHHHhcCCCCCCcc
Confidence            99987522     234668999999999999886 8999764

>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated

Probab=97.94  E-value=2.5e-06  Score=75.92  Aligned_cols=22  Identities=27%  Similarity=0.569  Sum_probs=21.0

Q ss_pred             ChhhhhccCccccCCCCCCeEe
Q 025467            1 MFAVMHDLCMIHTDLKPENVLL   22 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~   22 (252)
                      +|.+||+.||+|||+||+|||+
T Consensus       440 ~L~~lH~~giiHrDlkp~NILl  461 (535)
T PRK09605        440 IVAKLHKAGIVHGDLTTSNFIV  461 (535)
T ss_pred             HHHHHHhCCCccCCCChHHEEE
Confidence            5789999999999999999999

>COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms]

Probab=97.67  E-value=4e-05  Score=57.53  Aligned_cols=37  Identities=30%  Similarity=0.575  Sum_probs=30.1

Q ss_pred             hhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCcccc
Q 025467            2 FAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYE   66 (252)
Q Consensus         2 L~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~   66 (252)
                      +.-||..||||+||.++||++...                            .+.++|||++...
T Consensus       105 vg~lH~~givHGDLTtsNiIl~~~----------------------------~i~~IDfGLg~~s  141 (204)
T COG3642         105 VGKLHKAGIVHGDLTTSNIILSGG----------------------------RIYFIDFGLGEFS  141 (204)
T ss_pred             HHHHHhcCeecCCCccceEEEeCC----------------------------cEEEEECCccccc
Confidence            346899999999999999999543                            2788999987643

>cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain

Probab=97.66  E-value=2.3e-05  Score=60.09  Aligned_cols=22  Identities=23%  Similarity=0.415  Sum_probs=19.1

Q ss_pred             hhhh-hccCccccCCCCCCeEee
Q 025467            2 FAVM-HDLCMIHTDLKPENVLLV   23 (252)
Q Consensus         2 L~~l-H~~~ivHrdlk~~Nil~~   23 (252)
                      |..+ |+.||||+||++.||++.
T Consensus       137 l~~l~H~~glVHGDLs~~NIL~~  159 (197)
T cd05146         137 MKQLYKECNLVHADLSEYNMLWH  159 (197)
T ss_pred             HHHHHHhCCeecCCCCHHHEEEE
Confidence            4455 899999999999999994

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown.

>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family

Probab=97.54  E-value=5.5e-05  Score=54.97  Aligned_cols=24  Identities=38%  Similarity=0.725  Sum_probs=20.1

Q ss_pred             Chhhhhcc---CccccCCCCCCeEeec
Q 025467            1 MFAVMHDL---CMIHTDLKPENVLLVS   24 (252)
Q Consensus         1 aL~~lH~~---~ivHrdlk~~Nil~~~   24 (252)
                      +|+++|..   +++|+|++|.||+++.
T Consensus        98 ~l~~lh~~~~~~i~H~Dl~~~Nil~~~  124 (155)
T cd05120          98 LLAKLHQLPLLVLCHGDLHPGNILVDD  124 (155)
T ss_pred             HHHHHhCCCceEEEecCCCcceEEEEC
Confidence            36788874   6999999999999943

The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves

>cd05151 ChoK Choline Kinase (ChoK)

Probab=97.49  E-value=8.4e-05  Score=55.57  Aligned_cols=23  Identities=35%  Similarity=0.543  Sum_probs=20.1

Q ss_pred             ChhhhhccCc-----cccCCCCCCeEee
Q 025467            1 MFAVMHDLCM-----IHTDLKPENVLLV   23 (252)
Q Consensus         1 aL~~lH~~~i-----vHrdlk~~Nil~~   23 (252)
                      +|+.||+.++     +|+|++|.||+++
T Consensus        95 ~l~~LH~~~~~~~~~~HgD~~~~Nil~~  122 (170)
T cd05151          95 LLKKLHSSPLPDLVPCHNDLLPGNFLLD  122 (170)
T ss_pred             HHHHHhCCCCCCceeecCCCCcCcEEEE
Confidence            4678999875     9999999999994

The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph

>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase

Probab=97.43  E-value=0.00011  Score=63.69  Aligned_cols=38  Identities=26%  Similarity=0.446  Sum_probs=30.3

Q ss_pred             hhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCcccc
Q 025467            2 FAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYE   66 (252)
Q Consensus         2 L~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~   66 (252)
                      +..+|..|++|+|+||.||++.                           .++.++++|||++...
T Consensus       270 l~ql~~~g~~H~D~hPgNilv~---------------------------~~g~i~liDfG~~~~l  307 (437)
T TIGR01982       270 LNQVLRDGFFHADLHPGNIFVL---------------------------KDGKIIALDFGIVGRL  307 (437)
T ss_pred             HHHHHhCCceeCCCCcccEEEC---------------------------CCCcEEEEeCCCeeEC
Confidence            4568999999999999999994                           3445788888876543

This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.

>KOG3087 consensus Serine/threonine protein kinase [General function prediction only]

Probab=97.24  E-value=0.0004  Score=52.27  Aligned_cols=42  Identities=36%  Similarity=0.527  Sum_probs=32.7

Q ss_pred             hhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccC
Q 025467            2 FAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYER   67 (252)
Q Consensus         2 L~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~   67 (252)
                      +.-||.++|+|+||..+||++..++                        ....+.++|||++....
T Consensus       126 igklH~ndiiHGDLTTSNill~~~~------------------------~~~~~~lIdfgls~~s~  167 (229)
T KOG3087|consen  126 IGKLHDNDIIHGDLTTSNILLRSDG------------------------NQITPILIDFGLSSVSR  167 (229)
T ss_pred             HHHhhhCCeecccccccceEEecCC------------------------CcCceEEEeecchhccc
Confidence            4569999999999999999996543                        23445789999876543

>PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases

Probab=97.14  E-value=0.00036  Score=53.25  Aligned_cols=35  Identities=29%  Similarity=0.560  Sum_probs=25.9

Q ss_pred             hhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCcccc
Q 025467            4 VMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYE   66 (252)
Q Consensus         4 ~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~   66 (252)
                      .+|..||+|+|+.+.|||+..+                            .+.++|||.+...
T Consensus       122 ~~~~~givHGDLs~~NIlv~~~----------------------------~~~iIDf~qav~~  156 (188)
T PF01163_consen  122 MLHKAGIVHGDLSEYNILVDDG----------------------------KVYIIDFGQAVDS  156 (188)
T ss_dssp             HHHCTTEEESS-STTSEEEETT----------------------------CEEE--GTTEEET
T ss_pred             HHHhcCceecCCChhhEEeecc----------------------------eEEEEecCcceec
Confidence            4689999999999999999532                            5789999877653

Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A.

>PF06293 Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; InterPro: IPR010440 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases

Probab=97.09  E-value=0.00037  Score=54.16  Aligned_cols=24  Identities=38%  Similarity=0.649  Sum_probs=21.2

Q ss_pred             hhhhhccCccccCCCCCCeEeecC
Q 025467            2 FAVMHDLCMIHTDLKPENVLLVSS   25 (252)
Q Consensus         2 L~~lH~~~ivHrdlk~~Nil~~~~   25 (252)
                      ++-||..||+|+|+++.|||+..+
T Consensus       131 i~~lH~~gi~H~Dl~~~NILv~~~  154 (206)
T PF06293_consen  131 IAKLHDAGIYHGDLNPSNILVDPD  154 (206)
T ss_pred             HHHHHHCcCCCCCCCcccEEEeCC
Confidence            567999999999999999999553

Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents lipopolysaccharide kinases which are related to protein kinases IPR000719 from INTERPRO. This family includes waaP (rfaP) gene product is required for the addition of phosphate to O-4 of the first heptose residue of the lipopolysaccharide (LPS) inner core region. It has previously been shown that WaaP is necessary for resistance to hydrophobic and polycationic antimicrobials in E. coli and that it is required for virulence in invasive strains of Salmonella enterica [].; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0009103 lipopolysaccharide biosynthetic process, 0016020 membrane

>KOG1243 consensus Protein kinase [General function prediction only]

Probab=97.07  E-value=0.0007  Score=60.03  Aligned_cols=83  Identities=19%  Similarity=0.392  Sum_probs=53.4

Q ss_pred             Chhhhh-ccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCCCccccCCCc
Q 025467            1 MFAVMH-DLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHY   79 (252)
Q Consensus         1 aL~~lH-~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~~~~~~t~~y   79 (252)
                      ||.||| ..+++|++|.-..|+++..|.++++.|.+....                  .+++.      .......-..|
T Consensus       116 AL~FL~~d~~lvHgNv~~~SVfVn~~GeWkLggle~v~~~------------------~~~~~------~~~~~~~~~s~  171 (690)
T KOG1243|consen  116 ALSFLNDDCNLVHGNVCKDSVFVNESGEWKLGGLELVSKA------------------SGFNA------PAKSLYLIESF  171 (690)
T ss_pred             HHHHHhccCCeeeccEeeeeEEEcCCCcEEEeeeEEEecc------------------ccCCc------ccccchhhhcc
Confidence            789998 578999999999999988887777766432111                  11110      00011111234


Q ss_pred             ccchhhhcCCCCccchhHhHHHHHHHHHhC
Q 025467           80 RAPEVILGLGWTYPCDIWSVGCILVELCTG  109 (252)
Q Consensus        80 ~aPE~l~~~~~~~~~Diws~G~~l~~l~~g  109 (252)
                      ..|+.+....  -..|.|-|||++++++.|
T Consensus       172 ~~P~~~~~s~--~s~D~~~Lg~li~el~ng  199 (690)
T KOG1243|consen  172 DDPEEIDPSE--WSIDSWGLGCLIEELFNG  199 (690)
T ss_pred             cChhhcCccc--cchhhhhHHHHHHHHhCc
Confidence            5565543222  346999999999999998

>PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional

Probab=97.02  E-value=0.00049  Score=55.63  Aligned_cols=43  Identities=21%  Similarity=0.118  Sum_probs=31.1

Q ss_pred             hhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCcc
Q 025467            2 FAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT   64 (252)
Q Consensus         2 L~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~   64 (252)
                      +.-||..||+|+|+++.|||+..+..                    .......+.++||+.+.
T Consensus       151 i~~LH~~Gi~HgDL~~~NiLl~~~~~--------------------~~~~~~~~~LIDl~r~~  193 (268)
T PRK15123        151 VRDMHAAGINHRDCYICHFLLHLPFP--------------------GREEDLKLSVIDLHRAQ  193 (268)
T ss_pred             HHHHHHCcCccCCCChhhEEEecccc--------------------CCCCCceEEEEECCccc
Confidence            45799999999999999999953100                    00124468899998764

>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed

Probab=96.65  E-value=0.0012  Score=58.53  Aligned_cols=39  Identities=21%  Similarity=0.406  Sum_probs=28.7

Q ss_pred             hhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCcccc
Q 025467            5 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYE   66 (252)
Q Consensus         5 lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~   66 (252)
                      +...|++|+|+||+||++..++                       ...+.++++|||.....
T Consensus       276 if~~GffHaDpHPGNIlv~~~g-----------------------~~~~~i~llDFGivg~l  314 (537)
T PRK04750        276 VFRDGFFHADMHPGNIFVSYDP-----------------------PENPRYIALDFGIVGSL  314 (537)
T ss_pred             HHhCCeeeCCCChHHeEEecCC-----------------------CCCCeEEEEecceEEEC
Confidence            4568999999999999996554                       22336777888876543

>PF06176 WaaY: Lipopolysaccharide core biosynthesis protein (WaaY); InterPro: IPR009330 This family consists of several bacterial lipopolysaccharide core biosynthesis proteins (WaaY or RfaY)

Probab=96.44  E-value=0.0027  Score=49.46  Aligned_cols=23  Identities=26%  Similarity=0.432  Sum_probs=20.4

Q ss_pred             hhhhhccCccccCCCCCCeEeec
Q 025467            2 FAVMHDLCMIHTDLKPENVLLVS   24 (252)
Q Consensus         2 L~~lH~~~ivHrdlk~~Nil~~~   24 (252)
                      +.-+|+.|++|+|.+|+|++++.
T Consensus       148 ikqlH~~G~~HGD~hpgNFlv~~  170 (229)
T PF06176_consen  148 IKQLHKHGFYHGDPHPGNFLVSN  170 (229)
T ss_pred             HHHHHHcCCccCCCCcCcEEEEC
Confidence            56799999999999999999853

The waaY, waaQ, and waaP genes are located in the central operon of the waa (formerly rfa) locus on the chromosome of Escherichia coli. This locus contains genes whose products are involved in the assembly of the core region of the lipopolysaccharide molecule. WaaY is the enzyme that phosphorylates HepII in this system [].; GO: 0009244 lipopolysaccharide core region biosynthetic process

>KOG1093 consensus Predicted protein kinase (contains TBC and RHOD domains) [General function prediction only]

Probab=95.47  E-value=0.031  Score=48.94  Aligned_cols=34  Identities=24%  Similarity=0.179  Sum_probs=29.4

Q ss_pred             chhhHHHHHHHhccCCCCCCCCHHHHHcCCCCCC
Q 025467          214 SAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTR  247 (252)
Q Consensus       214 ~~~~~~~ll~~~L~~dP~~R~ta~e~l~hpwf~~  247 (252)
                      .+..+.+++.+|+-..|..||...+..+|+-|..
T Consensus       166 ~d~~~~~~~~~c~~~~~~ir~l~~~~~k~~i~~e  199 (725)
T KOG1093|consen  166 ADKKRLPLLKKCLWLEPIIRPLPMELSKRCSFTE  199 (725)
T ss_pred             hhHhHHHHhccCCccccccccchhHHhcCccHHH
Confidence            4567889999999999999999999999887653

>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]

Probab=94.87  E-value=0.022  Score=50.93  Aligned_cols=61  Identities=20%  Similarity=0.134  Sum_probs=44.3

Q ss_pred             ceEEeecCCccccCCC--CCccccCCCcccchhhhcCCCCccchhHhHHHHHHHHHhCCCCCC
Q 025467           54 AIKVIDFGSTTYERPD--QNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQ  114 (252)
Q Consensus        54 ~~~l~dfg~~~~~~~~--~~~~~~t~~y~aPE~l~~~~~~~~~Diws~G~~l~~l~~g~~pf~  114 (252)
                      ..+..+|+.+......  .+...+++.++|||+.....+....|.|+.++--.++.-|.+|-.
T Consensus       369 ~~~~~~~~v~~~L~~~~~~~t~~~~~~~~~pev~~~~~~~~~p~~~~~~~~~~~~ap~~pPr~  431 (829)
T KOG0576|consen  369 EVKLLDFAVPPQLTRTMKPRTAIGTPEPLAPEVIQENTIDGCPDSGSLAVSAIQMAPGLPPRS  431 (829)
T ss_pred             ccccccccCCcccCcccccccCCCCCCCCCchhhcccccccCCCccCCCcchhhcCCCCCCCC
Confidence            3466667665544433  344578899999999999999999999999986666666666543

>PRK09902 hypothetical protein; Provisional

Probab=93.95  E-value=0.041  Score=42.73  Aligned_cols=22  Identities=18%  Similarity=0.202  Sum_probs=20.3

Q ss_pred             hhhhhccCccccCCCCCCeEee
Q 025467            2 FAVMHDLCMIHTDLKPENVLLV   23 (252)
Q Consensus         2 L~~lH~~~ivHrdlk~~Nil~~   23 (252)
                      ++-||+.|+.|+|+-+.||++.
T Consensus       141 ia~LH~~Gv~Hgdly~khIll~  162 (216)
T PRK09902        141 FKKMHSVNRQHGCCYVRHIYVK  162 (216)
T ss_pred             HHHHHHCCCcCCCCCHhheeec
Confidence            5679999999999999999994

>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]

Probab=93.32  E-value=0.16  Score=48.73  Aligned_cols=32  Identities=38%  Similarity=0.517  Sum_probs=28.4

Q ss_pred             hHHHHHHHhccCCCCCCCCHHHHHcCCCCCCc
Q 025467          217 DLTHLLQGLLRYDPTDRLTAREALRHPFFTRD  248 (252)
Q Consensus       217 ~~~~ll~~~L~~dP~~R~ta~e~l~hpwf~~~  248 (252)
                      ...+.+.+|+.-++++|+++.+++.|||.+-.
T Consensus       409 ~~~d~~~~~~~~~~~~Rl~~~~ll~~~f~~~~  440 (1351)
T KOG1035|consen  409 ELLDALPKCLDEDSEERLSALELLTHPFLRFP  440 (1351)
T ss_pred             hhhhhhhhhcchhhhhccchhhhhhchhcccc
Confidence            56778899999999999999999999997654

>PRK05231 homoserine kinase; Provisional

Probab=92.52  E-value=0.12  Score=42.93  Aligned_cols=16  Identities=44%  Similarity=0.553  Sum_probs=14.6

Q ss_pred             cCccccCCCCCCeEee
Q 025467            8 LCMIHTDLKPENVLLV   23 (252)
Q Consensus         8 ~~ivHrdlk~~Nil~~   23 (252)
                      .++||+|+.+.||++.
T Consensus       187 ~~liHgD~~~~Nil~~  202 (319)
T PRK05231        187 RGVIHADLFRDNVLFE  202 (319)
T ss_pred             cccCCCCCCCCcEEEE
Confidence            4799999999999994

>cd05155 APH_ChoK_like_1 Uncharacterized bacterial proteins with similarity to Aminoglycoside 3'-phosphotransferase (APH) and Choline kinase (ChoK) family members

Probab=92.47  E-value=0.11  Score=41.00  Aligned_cols=16  Identities=38%  Similarity=0.576  Sum_probs=14.2

Q ss_pred             cCccccCCCCCCeEee
Q 025467            8 LCMIHTDLKPENVLLV   23 (252)
Q Consensus         8 ~~ivHrdlk~~Nil~~   23 (252)
                      .+++|+|+.+.||++.
T Consensus       164 ~~l~HGD~~~~Nvlv~  179 (235)
T cd05155         164 PVWFHGDLAPGNLLVQ  179 (235)
T ss_pred             ceEEeCCCCCCcEEEE
Confidence            4589999999999994

The APH/ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates, such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides, and macrolides leads to their inactivation and to bacterial antibiotic resista

>KOG3741 consensus Poly(A) ribonuclease subunit [RNA processing and modification]

Probab=92.24  E-value=0.61  Score=41.10  Aligned_cols=70  Identities=17%  Similarity=0.263  Sum_probs=46.9

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCCCccccCCCcc
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYR   80 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~~~~~~t~~y~   80 (252)
                      ||.++|+.|++-+-|.+.+||+..                           +..++|...|.........         .
T Consensus       405 aL~sIHssGLAck~L~~~kIlv~G---------------------------~~RIriS~C~i~Dvl~~d~---------~  448 (655)
T KOG3741|consen  405 ALYSIHSSGLACKTLDLKKILVTG---------------------------KMRIRISGCGIMDVLQEDP---------T  448 (655)
T ss_pred             HHHHHHhcCceeecccHhHeEeeC---------------------------cceEEEecccceeeecCCC---------C
Confidence            688999999998999999999944                           3345555544433322221         0


Q ss_pred             cchhhhcCCCCccchhHhHHHHHHHHHhCCC
Q 025467           81 APEVILGLGWTYPCDIWSVGCILVELCTGEA  111 (252)
Q Consensus        81 aPE~l~~~~~~~~~Diws~G~~l~~l~~g~~  111 (252)
                      +  .+.   --.+-|.-.+|.++..|.+|..
T Consensus       449 ~--~le---~~Qq~D~~~lG~ll~aLAt~~~  474 (655)
T KOG3741|consen  449 E--PLE---SQQQNDLRDLGLLLLALATGTE  474 (655)
T ss_pred             c--chh---HHhhhhHHHHHHHHHHHhhccc
Confidence            1  111   1245688899999999999853

>COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms]

Probab=91.73  E-value=0.2  Score=40.43  Aligned_cols=19  Identities=26%  Similarity=0.419  Sum_probs=16.7

Q ss_pred             ccCccccCCCCCCeEeecC
Q 025467            7 DLCMIHTDLKPENVLLVSS   25 (252)
Q Consensus         7 ~~~ivHrdlk~~Nil~~~~   25 (252)
                      ..||||+|++.-||+++.+
T Consensus       220 ~~GiVHGDlSefNIlV~~d  238 (304)
T COG0478         220 RRGIVHGDLSEFNILVTED  238 (304)
T ss_pred             HcCccccCCchheEEEecC
Confidence            5799999999999999554

>PRK12396 5-methylribose kinase; Reviewed

Probab=90.36  E-value=1.2  Score=38.24  Aligned_cols=17  Identities=29%  Similarity=0.520  Sum_probs=14.9

Q ss_pred             cCccccCCCCCCeEeec
Q 025467            8 LCMIHTDLKPENVLLVS   24 (252)
Q Consensus         8 ~~ivHrdlk~~Nil~~~   24 (252)
                      +.++|||+++.||+++.
T Consensus       227 ~aLlHGDlHtGSI~v~~  243 (409)
T PRK12396        227 QALIHGDLHTGSVFVKN  243 (409)
T ss_pred             hhhccCcCCCCCEEecC
Confidence            56999999999999954

>cd05156 ChoK_euk Choline Kinase (ChoK) in eukaryotes

Probab=90.34  E-value=0.28  Score=40.36  Aligned_cols=17  Identities=35%  Similarity=0.692  Sum_probs=14.6

Q ss_pred             cCccccCCCCCCeEeec
Q 025467            8 LCMIHTDLKPENVLLVS   24 (252)
Q Consensus         8 ~~ivHrdlk~~Nil~~~   24 (252)
                      .+++|+|+.+.||++..
T Consensus       179 ~~lcH~Dl~~~Nil~~~  195 (302)
T cd05156         179 VVFCHNDLQEGNILLLN  195 (302)
T ss_pred             ceEEecCCCcCeEEecC
Confidence            35899999999999953

The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC) and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. ChoK plays an important role in cell signaling pathways and the regulation of cell growth. Along with PCho, it is involved in malignant transformation through Ras oncogenes in various human cancer

>cd05153 HomoserineK_II Homoserine Kinase, type II

Probab=90.34  E-value=0.24  Score=40.60  Aligned_cols=17  Identities=41%  Similarity=0.509  Sum_probs=14.8

Q ss_pred             cCccccCCCCCCeEeec
Q 025467            8 LCMIHTDLKPENVLLVS   24 (252)
Q Consensus         8 ~~ivHrdlk~~Nil~~~   24 (252)
                      .+++|+|+.|.||++..
T Consensus       175 ~~l~HgD~~~~Nil~~~  191 (296)
T cd05153         175 RGVIHADLFRDNVLFDG  191 (296)
T ss_pred             CcCCccCcCcccEEEeC
Confidence            46999999999999943

Homoserine kinase is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of unusual homoserine kinases, from a subset of bacteria, which have a PK fold. These proteins do not bear any similarity to the GHMP family homoserine kinases present in most bacteria and eukaryotes. Homoserine kinase catalyzes the transfer of the gamma-phosphoryl group from ATP to L-homoserine producing L-homoserine phosphate, an intermediate in the production of the amino acids threonine, methionine, and isoleucine.

>cd05157 ETNK_euk Ethanolamine kinase (ETNK) in eukaryotes

Probab=90.05  E-value=0.29  Score=38.55  Aligned_cols=17  Identities=24%  Similarity=0.466  Sum_probs=14.7

Q ss_pred             cCccccCCCCCCeEeec
Q 025467            8 LCMIHTDLKPENVLLVS   24 (252)
Q Consensus         8 ~~ivHrdlk~~Nil~~~   24 (252)
                      .+++|+|+.+.|||++.
T Consensus       170 ~~l~H~Dl~~~Nil~~~  186 (235)
T cd05157         170 IVFCHNDLLSGNIIYNE  186 (235)
T ss_pred             EEEEcCCCCcCcEEEeC
Confidence            46899999999999953

ETNK is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major phospholipid, phosphatidylethanolamine (PtdEtn). Unlike ChoK, ETNK shows specific activity for its substrate, and displays negligible activity towards N-methylated derivatives of Etn. The Drosophila ETNK is implicated in development and neuronal function. Mammals contain two ETNK proteins, ETNK1 and ETNK2. ETNK1 selectively increases Etn uptake and phosphorylation, as well as PtdEtn synthesis. ETNK2 is found primarily in the liver and reproductive tissues. It plays a critical role in regulating placental hemostasis to support late embryo

>TIGR00938 thrB_alt homoserine kinase, Neisseria type

Probab=89.98  E-value=0.3  Score=40.34  Aligned_cols=17  Identities=47%  Similarity=0.675  Sum_probs=15.2

Q ss_pred             cCccccCCCCCCeEeec
Q 025467            8 LCMIHTDLKPENVLLVS   24 (252)
Q Consensus         8 ~~ivHrdlk~~Nil~~~   24 (252)
                      .+++|+|+.+.||+++.
T Consensus       187 ~~l~HgD~~~~Nvl~~~  203 (307)
T TIGR00938       187 RGVIHADLFPDNVLFDG  203 (307)
T ss_pred             CccCCCCCCcCcEEEEC
Confidence            57999999999999954

Homoserine kinase is required in the biosynthesis of threonine from aspartate.The member of this family from Pseudomonas aeruginosa was shown by direct assay and complementation to act specifically as a homoserine kinase.

>TIGR02172 Fb_sc_TIGR02172 Fibrobacter succinogenes paralogous family TIGR02172

Probab=89.92  E-value=0.27  Score=38.80  Aligned_cols=15  Identities=20%  Similarity=0.383  Sum_probs=13.4

Q ss_pred             CccccCCCCCCeEee
Q 025467            9 CMIHTDLKPENVLLV   23 (252)
Q Consensus         9 ~ivHrdlk~~Nil~~   23 (252)
                      .++|+|+.|.||+++
T Consensus       154 ~~~HgD~~~~Nii~~  168 (226)
T TIGR02172       154 TCLHGDFQIGNLITS  168 (226)
T ss_pred             ceEecCCCCCcEEEc
Confidence            478999999999994

This model describes a paralogous family of five proteins, likely to be enzymes, in the rumen bacterium Fibrobacter succinogenes S85. Members show homology to proteins described by PFAM model pfam01636, a phosphotransferase enzyme family associated with resistance to aminoglycoside antibiotics. However, members of this family score below the current trusted and noise cutoffs for pfam01636.

>PRK10271 thiK thiamine kinase; Provisional

Probab=89.79  E-value=0.36  Score=36.81  Aligned_cols=15  Identities=20%  Similarity=0.401  Sum_probs=13.2

Q ss_pred             ccccCCCCCCeEeec
Q 025467           10 MIHTDLKPENVLLVS   24 (252)
Q Consensus        10 ivHrdlk~~Nil~~~   24 (252)
                      .+|+|+.|.||+++.
T Consensus        79 p~H~D~~~~N~~~~~   93 (188)
T PRK10271         79 PLHMDVHAGNLVHSA   93 (188)
T ss_pred             eecCCCCCccEEEEC
Confidence            699999999999854

>cd05150 APH Aminoglycoside 3'-phosphotransferase (APH)

Probab=89.78  E-value=0.3  Score=38.79  Aligned_cols=16  Identities=25%  Similarity=0.343  Sum_probs=14.1

Q ss_pred             cCccccCCCCCCeEee
Q 025467            8 LCMIHTDLKPENVLLV   23 (252)
Q Consensus         8 ~~ivHrdlk~~Nil~~   23 (252)
                      -.++|+|+.+.|||+.
T Consensus       163 ~~l~HgD~~~~Nil~~  178 (244)
T cd05150         163 LVVTHGDACLPNIIVD  178 (244)
T ss_pred             eEEECCCCCCccEEEe
Confidence            3589999999999994

The APH subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). APH catalyzes the transfer of the gamma-phosphoryl group from ATP to aminoglycoside antibiotics such as kanamycin, streptomycin, neomycin, and gentamicin, among others. The aminoglycoside antibiotics target the 30S ribosome and promote miscoding, leading to the production of defective proteins which insert into the bacterial membrane, resulting in membrane damage and the ultimate demise of the bacterium. Phosphorylation of the aminoglycoside antibiotics results in their inactivation, leading to bacterial antibiotic resistance. The APH gene is found on transposons and plasmids and is thought to have originated as a self-defense mechanism used by microorganisms that produce the antibio

>COG1718 RIO1 Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms / Cell division and chromosome partitioning]

Probab=88.70  E-value=0.4  Score=38.20  Aligned_cols=32  Identities=22%  Similarity=0.328  Sum_probs=25.8

Q ss_pred             ccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCcccc
Q 025467            7 DLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYE   66 (252)
Q Consensus         7 ~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~   66 (252)
                      ..++||+||+.=|||+.                            .+.+.++|++.|...
T Consensus       185 ~a~LVHgDLSEyNiL~~----------------------------~~~p~iID~~QaV~~  216 (268)
T COG1718         185 EAGLVHGDLSEYNILVH----------------------------DGEPYIIDVSQAVTI  216 (268)
T ss_pred             hcCcccccchhhheEEE----------------------------CCeEEEEECcccccc
Confidence            47899999999999994                            345788999877543

>smart00587 CHK ZnF_C4 abd HLH domain containing kinases domain

Probab=88.14  E-value=0.49  Score=36.36  Aligned_cols=17  Identities=24%  Similarity=0.323  Sum_probs=14.8

Q ss_pred             cCccccCCCCCCeEeec
Q 025467            8 LCMIHTDLKPENVLLVS   24 (252)
Q Consensus         8 ~~ivHrdlk~~Nil~~~   24 (252)
                      ..++|||+.+.||++..
T Consensus       120 ~vl~HgD~~~~N~~~~~  136 (196)
T smart00587      120 NVLNHGDLWANNIMFKY  136 (196)
T ss_pred             eEEeeCCCCccceeecc
Confidence            46899999999999954

subfamily of choline kinases

>PF01636 APH: Phosphotransferase enzyme family This family is part of the larger protein kinase superfamily

Probab=88.08  E-value=0.23  Score=38.73  Aligned_cols=16  Identities=44%  Similarity=0.735  Sum_probs=12.6

Q ss_pred             cCccccCCCCCCeEee
Q 025467            8 LCMIHTDLKPENVLLV   23 (252)
Q Consensus         8 ~~ivHrdlk~~Nil~~   23 (252)
                      ..++|+|+.+.||+++
T Consensus       166 ~~~~HgD~~~~Nil~~  181 (239)
T PF01636_consen  166 PVLIHGDLHPGNILVD  181 (239)
T ss_dssp             EEEE-SS-SGGGEEEE
T ss_pred             cEEEEeccccccceee
Confidence            5699999999999995

; InterPro: IPR002575 This entry consists of bacterial antibiotic resistance proteins, which confer resistance to various aminoglycosides they include:- aminoglycoside 3'-phosphotransferase or kanamycin kinase / neomycin-kanamycin phosphotransferase and streptomycin 3''-kinase or streptomycin 3''-phosphotransferase. The aminoglycoside phosphotransferases inactivate aminoglycoside antibiotics via phosphorylation []. The proteins are found in a range of taxonomic groups.; PDB: 2PPQ_A 2Q83_B 3TDV_B 3TDW_A 3I0O_A 3I0Q_A 3I1A_B 3Q2M_A 3HAV_C 2PUI_B ....

>COG3173 Predicted aminoglycoside phosphotransferase [General function prediction only]

Probab=87.89  E-value=0.56  Score=38.95  Aligned_cols=17  Identities=24%  Similarity=0.616  Sum_probs=14.8

Q ss_pred             cCccccCCCCCCeEeec
Q 025467            8 LCMIHTDLKPENVLLVS   24 (252)
Q Consensus         8 ~~ivHrdlk~~Nil~~~   24 (252)
                      ..++|+|.++.||++..
T Consensus       198 ~~lvHGD~~~gNlii~~  214 (321)
T COG3173         198 PVLVHGDYRPGNLIIDP  214 (321)
T ss_pred             ceeeeCCcccCCEEEeC
Confidence            46999999999999954

>TIGR02721 ycfN_thiK thiamine kinase

Probab=87.86  E-value=0.47  Score=38.01  Aligned_cols=16  Identities=19%  Similarity=0.430  Sum_probs=14.1

Q ss_pred             CccccCCCCCCeEeec
Q 025467            9 CMIHTDLKPENVLLVS   24 (252)
Q Consensus         9 ~ivHrdlk~~Nil~~~   24 (252)
                      .++|+|+.+.||+++.
T Consensus       147 ~l~H~Dl~~~Nil~~~  162 (256)
T TIGR02721       147 APLHMDVHAYNLVVTP  162 (256)
T ss_pred             eeecCCCCcCcEEEeC
Confidence            5899999999999953

Members of this family are the ycfN gene product of Escherichia coli, now identified as the salvage enzyme thiamine kinase (thiK), and additional proteobacterial homologs taken to be orthologs with equivalent function.

>cd05152 MPH2' Macrolide 2'-Phosphotransferase (MPH2')

Probab=87.47  E-value=0.42  Score=38.95  Aligned_cols=16  Identities=31%  Similarity=0.704  Sum_probs=14.1

Q ss_pred             cCccccCCCCCCeEee
Q 025467            8 LCMIHTDLKPENVLLV   23 (252)
Q Consensus         8 ~~ivHrdlk~~Nil~~   23 (252)
                      ..++|+|+++.||+++
T Consensus       185 ~~lvHGD~~~~Nilv~  200 (276)
T cd05152         185 TVLVHGDLHPGHILID  200 (276)
T ss_pred             CeeEeCCCCCCcEEEe
Confidence            3589999999999994

MPH2' is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). MPH2' catalyzes the transfer of the gamma-phosphoryl group from ATP to the 2'-hydroxyl of macrolide antibiotics such as erythromycin, clarithromycin, and azithromycin, among others. Macrolides penetrate the bacterial cell and bind to ribosomes, where it interrupts protein elongation, leading ultimately to the demise of the bacterium. Phosphorylation of macrolides leads to their inactivation. Based on substrate specificity and amino acid sequence, MPH2' is divided into types I and II, encoded by mphA and mphB genes, respectively. MPH2'I inactivates 14-membered ring macrolides while MPH2'II inactivates both 14- and 16-membered ring macrolides. Enzymatic inactivation of macrolides has been reported

>TIGR02906 spore_CotS spore coat protein, CotS family

Probab=86.48  E-value=0.67  Score=38.17  Aligned_cols=16  Identities=31%  Similarity=0.358  Sum_probs=14.4

Q ss_pred             cCccccCCCCCCeEee
Q 025467            8 LCMIHTDLKPENVLLV   23 (252)
Q Consensus         8 ~~ivHrdlk~~Nil~~   23 (252)
                      .+++|+|+.+.||+++
T Consensus       187 ~~liHgD~~~~Nil~~  202 (313)
T TIGR02906       187 RGFCHQDYAYHNILLK  202 (313)
T ss_pred             CceEcCCCCcccEEEe
Confidence            5789999999999994

Members of this family include the spore coat proteins CotS and YtaA from Bacillus subtilis and, from other endospore-forming bacteria, homologs that are more closely related to these two than to the spore coat proteins YutH and YsxE. The CotS family is more broadly distributed than YutH or YsxE, but still is not universal among spore-formers.

>COG0661 AarF Predicted unusual protein kinase [General function prediction only]

Probab=85.68  E-value=0.55  Score=41.76  Aligned_cols=29  Identities=28%  Similarity=0.371  Sum_probs=21.1

Q ss_pred             ccCccccCCCCCCeEeecCCccccCCCcc
Q 025467            7 DLCMIHTDLKPENVLLVSSEYIKVPDYKS   35 (252)
Q Consensus         7 ~~~ivHrdlk~~Nil~~~~~~~~~~d~~~   35 (252)
                      ..|++|.|.+|.||++..++...+-|||.
T Consensus       283 ~dgffHaDpHpGNi~v~~~g~i~~lDfGi  311 (517)
T COG0661         283 RDGFFHADPHPGNILVRSDGRIVLLDFGI  311 (517)
T ss_pred             hcCccccCCCccceEEecCCcEEEEcCcc
Confidence            47899999999999996655444444443

>COG2334 Putative homoserine kinase type II (protein kinase fold) [General function prediction only]

Probab=84.99  E-value=0.94  Score=37.92  Aligned_cols=15  Identities=53%  Similarity=0.928  Sum_probs=13.8

Q ss_pred             ccccCCCCCCeEeec
Q 025467           10 MIHTDLKPENVLLVS   24 (252)
Q Consensus        10 ivHrdlk~~Nil~~~   24 (252)
                      +||+|+.+.||++..
T Consensus       199 iIH~D~~~~NVl~d~  213 (331)
T COG2334         199 IIHGDLHPDNVLFDD  213 (331)
T ss_pred             eeecCCCccceeEcC
Confidence            999999999999954

>COG0510 ycfN Thiamine kinase and related kinases [Coenzyme transport and metabolism]

Probab=83.78  E-value=1.1  Score=36.38  Aligned_cols=16  Identities=44%  Similarity=0.696  Sum_probs=14.0

Q ss_pred             CccccCCCCCCeEeec
Q 025467            9 CMIHTDLKPENVLLVS   24 (252)
Q Consensus         9 ~ivHrdlk~~Nil~~~   24 (252)
                      -++|+|+.+.|+|.+.
T Consensus       154 v~cH~Dl~~~N~l~t~  169 (269)
T COG0510         154 VPCHNDLNPGNLLLTD  169 (269)
T ss_pred             eeecCCCCccceEEcC
Confidence            4899999999999944

>KOG1826 consensus Ras GTPase activating protein RasGAP/neurofibromin [Defense mechanisms]

Probab=83.49  E-value=0.26  Score=49.09  Aligned_cols=77  Identities=18%  Similarity=0.157  Sum_probs=53.3

Q ss_pred             ccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCC---CccccCCCcccchhhh
Q 025467           10 MIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ---NYIVSTRHYRAPEVIL   86 (252)
Q Consensus        10 ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~---~~~~~t~~y~aPE~l~   86 (252)
                      .+|+++|+-|.++..+                           -.+++.++|+.+...+..   ...++++.|+.++...
T Consensus      1361 ~v~~~Lkf~lpmIVtn---------------------------y~v~~gk~gLdKIknp~~sf~Gl~l~sp~~v~qli~N 1413 (2724)
T KOG1826|consen 1361 NVSKSLKFTLPMIVTN---------------------------YNVKLGKGGLDKIKNPVLSFFGLELCSPIYVLQLIKN 1413 (2724)
T ss_pred             chhhhhhhhccceecC---------------------------CcccccccccccccCchHhhhhhhhCCHHHHHHHHHH
Confidence            5788999999988443                           345566666666322221   1235677788887776


Q ss_pred             cCCCCccchhHhHHHHHHHHHhCCCCC
Q 025467           87 GLGWTYPCDIWSVGCILVELCTGEALF  113 (252)
Q Consensus        87 ~~~~~~~~Diws~G~~l~~l~~g~~pf  113 (252)
                      .-.++.+.|+|..|+.+|....|..+|
T Consensus      1414 ~ik~t~rsdilr~s~~ly~rs~~n~~f 1440 (2724)
T KOG1826|consen 1414 EIKFTKRSDILRRSLSLYLRSDGNAYF 1440 (2724)
T ss_pred             HHhhhhHHHHHHHHHHHHHHhcccHHH
Confidence            667887899999999998877666655

>PRK09550 mtnK methylthioribose kinase; Reviewed

Probab=83.15  E-value=1.1  Score=38.56  Aligned_cols=17  Identities=18%  Similarity=0.477  Sum_probs=14.8

Q ss_pred             ccCccccCCCCCCeEee
Q 025467            7 DLCMIHTDLKPENVLLV   23 (252)
Q Consensus         7 ~~~ivHrdlk~~Nil~~   23 (252)
                      ...++|||+++.||++.
T Consensus       222 ~~~l~HgDl~~gni~~~  238 (401)
T PRK09550        222 AEALLHGDLHTGSIFVT  238 (401)
T ss_pred             CCceeeccCCcccEEee
Confidence            35699999999999994

>KOG1235 consensus Predicted unusual protein kinase [General function prediction only]

Probab=83.10  E-value=1.6  Score=39.03  Aligned_cols=38  Identities=21%  Similarity=0.330  Sum_probs=28.2

Q ss_pred             ccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccC
Q 025467            7 DLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYER   67 (252)
Q Consensus         7 ~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~   67 (252)
                      ..|++|+|-+|.||++..+.                       .....+.+.|+|+.....
T Consensus       319 ~~GffHaDPHPGNilv~~~~-----------------------~~~~~ivllDhGl~~~is  356 (538)
T KOG1235|consen  319 KTGFFHADPHPGNILVRPNP-----------------------EGDEEIVLLDHGLYAVIS  356 (538)
T ss_pred             hcCCccCCCCCCcEEEecCC-----------------------CCCccEEEEccccccccc
Confidence            46899999999999996432                       235567888888765443

>TIGR02904 spore_ysxE spore coat protein YsxE

Probab=83.04  E-value=0.88  Score=37.62  Aligned_cols=17  Identities=18%  Similarity=0.288  Sum_probs=14.7

Q ss_pred             cCccccCCCCCCeEeec
Q 025467            8 LCMIHTDLKPENVLLVS   24 (252)
Q Consensus         8 ~~ivHrdlk~~Nil~~~   24 (252)
                      .+++|+|+.+.|+|+..
T Consensus       196 ~~lcHgD~~~~Nvl~~~  212 (309)
T TIGR02904       196 TVLVHGKLSLSHFLYDE  212 (309)
T ss_pred             eeeeCCCCcHHhEEEcC
Confidence            37999999999999943

Members of this family are homologs of the Bacillus subtilis spore coat protein CotS. Members of this family, designated YsxE, are found only in the family Bacillaceae, from among the endospore-forming members of the Firmicutes branch of the Bacteria. As a rule, the ysxE gene is found immediately downstream of spoVID, a gene necessary for spore coat assembly. The protein has been shown to be part of the spore coat.

>PLN02236 choline kinase

Probab=82.50  E-value=1.1  Score=37.78  Aligned_cols=16  Identities=25%  Similarity=0.495  Sum_probs=14.2

Q ss_pred             cCccccCCCCCCeEee
Q 025467            8 LCMIHTDLKPENVLLV   23 (252)
Q Consensus         8 ~~ivHrdlk~~Nil~~   23 (252)
                      ..++|+|+++.|||+.
T Consensus       200 ~~~cH~Dl~~~Nil~~  215 (344)
T PLN02236        200 IGFCHNDLQYGNIMID  215 (344)
T ss_pred             ceEEeCCCCcCcEEEe
Confidence            3689999999999994

>TIGR01767 MTRK 5-methylthioribose kinase

Probab=82.03  E-value=1.2  Score=37.83  Aligned_cols=19  Identities=16%  Similarity=0.398  Sum_probs=15.8

Q ss_pred             hccCccccCCCCCCeEeec
Q 025467            6 HDLCMIHTDLKPENVLLVS   24 (252)
Q Consensus         6 H~~~ivHrdlk~~Nil~~~   24 (252)
                      +...++|||+.+.||+++.
T Consensus       190 ~~~~llHGDl~~gNi~~~~  208 (370)
T TIGR01767       190 SAETLLHGDLHSGSIFVSE  208 (370)
T ss_pred             CcceeeeccCCcccEEEcC
Confidence            3467999999999999943

This enzyme is involved in the methionine salvage pathway in certain bacteria.

>PHA03111 Ser/Thr kinase; Provisional

Probab=81.40  E-value=0.52  Score=39.32  Aligned_cols=19  Identities=42%  Similarity=0.807  Sum_probs=15.7

Q ss_pred             cCccccCCCCCCeEeecCC
Q 025467            8 LCMIHTDLKPENVLLVSSE   26 (252)
Q Consensus         8 ~~ivHrdlk~~Nil~~~~~   26 (252)
                      .+.+|-||||.|||+-.+.
T Consensus       302 ~nF~H~DLKPdNILiFds~  320 (444)
T PHA03111        302 DNFLHVDLKPDNILIFDSD  320 (444)
T ss_pred             ceeeeccCCCCcEEEecCC
Confidence            4689999999999996553

>PF01633 Choline_kinase: Choline/ethanolamine kinase; InterPro: IPR002573 Choline kinase, (ATP:choline phosphotransferase, 2

Probab=81.07  E-value=0.64  Score=36.03  Aligned_cols=14  Identities=43%  Similarity=0.880  Sum_probs=10.1

Q ss_pred             CccccCCCCCCeEe
Q 025467            9 CMIHTDLKPENVLL   22 (252)
Q Consensus         9 ~ivHrdlk~~Nil~   22 (252)
                      .++|.|+.+.|||+
T Consensus       144 v~cHnDl~~~Nil~  157 (211)
T PF01633_consen  144 VFCHNDLNPGNILI  157 (211)
T ss_dssp             EEE-S--SGGGEEE
T ss_pred             eEeeccCccccEEe
Confidence            48999999999999

7.1.32 from EC) belongs to the choline/ethanolamine kinase family. Ethanolamine and choline are major membrane phospholipids, in the form of glycerophosphoethanolamine and glycerophosphocholine. Ethanolamine is also a component of the glycosylphosphatidylinositol (GPI) anchor, which is necessary for cell-surface protein attachment []. The de novo synthesis of these phospholipids begins with the creation of phosphoethanolamine and phosphocholine by ethanolamine and choline kinases in the first step of the CDP-ethanolamine pathway [, ]. There are two putative choline/ethanolamine kinases (C/EKs) in the Trypanosoma brucei genome. Ethanolamine kinase has no choline kinase activity [] and its activity is inhibited by ADP []. Inositol supplementation represses ethanolamine kinase, decreasing the incorporation of ethanolamine into the CDP-ethanolamine pathway and into phosphatidylethanolamine and phosphatidylcholine []. ; GO: 0016773 phosphotransferase activity, alcohol group as acceptor; PDB: 3C5I_A 2IG7_A 3LQ3_A 3FEG_A 2QG7_E 3FI8_A 1NW1_A 3MES_A 3G15_A 2CKP_B ....

>PRK11768 serine/threonine protein kinase; Provisional

Probab=80.90  E-value=1.2  Score=37.22  Aligned_cols=15  Identities=40%  Similarity=0.651  Sum_probs=13.9

Q ss_pred             cCccccCCCCCCeEe
Q 025467            8 LCMIHTDLKPENVLL   22 (252)
Q Consensus         8 ~~ivHrdlk~~Nil~   22 (252)
                      .++||+|+.+.|||+
T Consensus       196 ~~liHgD~h~~NvL~  210 (325)
T PRK11768        196 LLRLHGDCHPGNILW  210 (325)
T ss_pred             ccceecCCCchhccc
Confidence            468999999999999

>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase

Probab=80.06  E-value=1.3  Score=41.05  Aligned_cols=75  Identities=27%  Similarity=0.326  Sum_probs=54.9

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCC---CccccCC
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ---NYIVSTR   77 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~---~~~~~t~   77 (252)
                      ||+|||++||+||||||+|||+..                           .+.++|+|||+++......   ....+|+
T Consensus       116 aL~yLH~~gIiHrDLKP~NILl~~---------------------------~g~vkL~DFGls~~~~~~~~~~~~~~~t~  168 (669)
T cd05610         116 ALDYLHRHGIIHRDLKPDNMLISN---------------------------EGHIKLTDFGLSKVTLNRELNMMDILTTP  168 (669)
T ss_pred             HHHHHHhCCEEeCCccHHHEEEcC---------------------------CCCEEEEeCCCCccccCCcccccccccCc
Confidence            689999999999999999999943                           4457888888876543321   2246788


Q ss_pred             CcccchhhhcCC-CCccchhHhHHHH
Q 025467           78 HYRAPEVILGLG-WTYPCDIWSVGCI  102 (252)
Q Consensus        78 ~y~aPE~l~~~~-~~~~~Diws~G~~  102 (252)
                      .|.+||...... -....++|++|+-
T Consensus       169 ~~~~pe~~~~~~~~~~~s~~~s~g~~  194 (669)
T cd05610         169 SMAKPKNDYSRTPGQVLSLISSLGFN  194 (669)
T ss_pred             cccCccccccCCCCceeeeeeecCcC
Confidence            999998765433 2355678888853

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	252
3nr9_A	368	Structure Of Human Cdc2-Like Kinase 2 (Clk2) Length		1e-47
1z57_A	339	Crystal Structure Of Human Clk1 In Complex With 10z		3e-45
2vag_A	339	Crystal Structure Of Di-Phosphorylated Human Clk1 I		5e-44
2wu6_A	381	Crystal Structure Of The Human Clk3 In Complex With		2e-42
2exe_A	357	Crystal Structure Of The Phosphorylated Clk3 Length		2e-42
2eu9_A	355	Crystal Structure Of Clk3 Length = 355		3e-42
3llt_A	360	Crystal Structure Of Pf14_0431, Kinase Domain Lengt		6e-36
3anq_A	368	Human Dyrk1aINHIBITOR COMPLEX Length = 368		7e-20
2vx3_A	382	Crystal Structure Of The Human Dual Specificity Tyr		7e-20
4aze_A	382	Human Dyrk1a In Complex With Leucettine L41 Length		3e-19
3kvw_A	429	Crystal Structure Of Dual-Specificity Tyrosine Phos		5e-19
3k2l_A	429	Crystal Structure Of Dual-Specificity Tyrosine Phos		5e-19
4azf_A	417	Human Dyrk2 In Complex With Leucettine L41 Length =		7e-19
3beg_A	381	Crystal Structure Of Sr Protein Kinase 1 Complexed		8e-18
1wbp_A	397	Srpk1 Bound To 9mer Docking Motif Peptide Length =		9e-18
2x7g_A	389	Structure Of Human Serine-Arginine-Rich Protein-Spe		2e-17
3oz6_A	388	Crystal Structure Of Mapk From Cryptosporidium Parv		1e-15
3oht_A	389	Crystal Structure Of Salmo Salar P38alpha Length =		2e-15
1q8y_A	373	The Structure Of The Yeast Sr Protein Kinase, Sky1p		2e-15
4e7w_A	394	Structure Of Gsk3 From Ustilago Maydis Length = 394		2e-15
1how_A	373	The X-Ray Crystal Structure Of Sky1p, An Sr Protein		2e-15
2y8o_A	362	Crystal Structure Of Human P38alpha Complexed With		2e-15
1ove_A	366	The Structure Of P38 Alpha In Complex With A Dihydr		2e-15
1cm8_A	367	Phosphorylated Map Kinase P38-Gamma Length = 367		3e-15
3gcp_A	360	Human P38 Map Kinase In Complex With Sb203580 Lengt		4e-15
3d83_A	360	Crystal Structure Of P38 Kinase In Complex With A B		7e-15
2bal_A	365	P38alpha Map Kinase Bound To Pyrazoloamine Length =		8e-15
3e92_A	371	Crystal Structure Of P38 Kinase In Complex With A B		8e-15
2baq_A	365	P38alpha Bound To Ro3201195 Length = 365		9e-15
3nnx_A	354	Crystal Structure Of Phosphorylated P38 Alpha In Co		1e-14
4e5a_X	360	The W197a Mutant Of P38a Map Kinase Length = 360		1e-14
2fsl_X	367	Mitogen Activated Protein Kinase P38alpha (D176a+f3		1e-14
3d7z_A	360	Crystal Structure Of P38 Kinase In Complex With A B		1e-14
1ywr_A	360	Crystal Structure Analysis Of Inactive P38 Kinase D		1e-14
3mpt_A	371	Crystal Structure Of P38 Kinase In Complex With A P		1e-14
2fso_X	367	Mitogen Activated Protein Kinase P38alpha (D176a) A		1e-14
1m7q_A	366	Crystal Structure Of P38 Map Kinase In Complex With		1e-14
3fi4_A	372	P38 Kinase Crystal Structure In Complex With Ro4499		1e-14
1oz1_A	372	P38 Mitogen-Activated Kinase In Complex With 4-Azai		1e-14
2gfs_A	372	P38 Kinase Crystal Structure In Complex With Ro3201		1e-14
1yw2_A	360	Mutated Mus Musculus P38 Kinase (Mp38) Length = 360		1e-14
2fst_X	367	Mitogen Activated Protein Kinase P38alpha (d176a+f3		1e-14
3nnu_A	354	Crystal Structure Of P38 Alpha In Complex With Dp13		1e-14
3k3j_A	362	P38alpha Bound To Novel Dfg-Out Compound Pf-0041612		1e-14
1lew_A	360	Crystal Structure Of Map Kinase P38 Complexed To Th		1e-14
3hec_A	348	P38 In Complex With Imatinib Length = 348		1e-14
3gcu_A	360	Human P38 Map Kinase In Complex With Rl48 Length =		1e-14
2baj_A	365	P38alpha Bound To Pyrazolourea Length = 365		1e-14
3hrb_A	359	P38 Kinase Crystal Structure In Complex With Small		1e-14
3zsg_A	362	X-Ray Structure Of P38alpha Bound To Tak-715 Length		1e-14
3s3i_A	349	P38 Kinase Crystal Structure In Complex With Small		1e-14
1ian_A	366	Human P38 Map Kinase Inhibitor Complex Length = 366		1e-14
3ody_X	360	Crystal Structure Of P38alpha Y323q Active Mutant L		1e-14
2lgc_A	359	Joint Nmr And X-Ray Refinement Reveals The Structur		1e-14
3p4k_A	370	The Third Conformation Of P38a Map Kinase Observed		1e-14
1zzl_A	351	Crystal Structure Of P38 With Triazolopyridine Leng		1e-14
3oef_X	360	Crystal Structure Of Y323f Inactive Mutant Of P38al		1e-14
3tg1_A	380	Crystal Structure Of P38alpha In Complex With A Map		1e-14
3k3i_A	350	P38alpha Bound To Novel Dgf-Out Compound Pf-0021595		1e-14
3od6_X	360	Crystal Structure Of P38alpha Y323t Active Mutant L		1e-14
2npq_A	367	A Novel Lipid Binding Site In The P38 Alpha Map Kin		1e-14
3odz_X	360	Crystal Structure Of P38alpha Y323r Active Mutant L		1e-14
3dt1_A	383	P38 Complexed With A Quinazoline Inhibitor Length =		1e-14
2oza_B	366	Structure Of P38alpha Complex Length = 366		1e-14
1di9_A	360	The Structure Of P38 Mitogen-Activated Protein Kina		1e-14
2ghl_A	348	Mutant Mus Musculus P38 Kinase Domain In Complex Wi		2e-14
1bl6_A	379	The Complex Structure Of The Map Kinase P38SB216995		2e-14
1bmk_A	379	The Complex Structure Of The Map Kinase P38SB218655		2e-14
3kq7_A	380	Structure Of Human P38alpha With N-[4-Methyl-3-(6-{		2e-14
3hvc_A	362	Crystal Structure Of Human P38alpha Map Kinase Leng		2e-14
2puu_A	348	Crystal Structure Of P38 Complex With 1-(5-Tert-But		2e-14
2gtm_A	348	Mutated Mouse P38 Map Kinase Domain In Complex With		2e-14
4ewq_A	383	Human P38 Alpha Mapk In Complex With A Pyridazine B		2e-14
3coi_A	353	Crystal Structure Of P38delta Kinase Length = 353		2e-14
3py3_A	380	Crystal Structure Of Phosphorylated P38alpha Map Ki		2e-14
3mh2_A	360	Mutagenesis Of P38 Map Kinase Establishes Key Roles		2e-14
4exu_A	371	Mapk13, Inactive Form Length = 371		2e-14
3gc9_A	370	The Structure Of P38beta C119s, C162s In Complex Wi		3e-14
3gc8_A	370	The Structure Of P38beta C162s In Complex With A Di		4e-14
3vuk_A	370	Crystal Structure Of A Cysteine-deficient Mutant M5		5e-14
3gi3_A	360	Crystal Structure Of A N-Phenyl-N'-Naphthylurea Ana		6e-14
3vui_A	370	Crystal Structure Of A Cysteine-deficient Mutant M2		6e-14
3e7o_A	360	Crystal Structure Of Jnk2 Length = 360		6e-14
3vuh_A	370	Crystal Structure Of A Cysteine-deficient Mutant M3		7e-14
3o8p_A	360	Conformational Plasticity Of P38 Map Kinase Dfg Mot		1e-13
3mh0_A	360	Mutagenesis Of P38 Map Kinase Eshtablishes Key Role		1e-13
3npc_A	364	Crystal Structure Of Jnk2 Complexed With Birb796 Le		1e-13
3mh1_A	360	Mutagenesis Of P38 Map Kinase Establishes Key Roles		2e-13
3mh3_A	360	Mutagenesis Of P38 Map Kinase Establishes Key Roles		2e-13
3gp0_A	348	Crystal Structure Of Human Mitogen Activated Protei		2e-13
3kvx_A	364	Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562 Le		3e-13
3vug_A	370	Crystal Structure Of A Cysteine-deficient Mutant M2		3e-13
3fi3_A	364	Crystal Structure Of Jnk3 With Indazole Inhibitor,		3e-13
3vud_A	370	Crystal Structure Of A Cysteine-deficient Mutant M1		3e-13
3fv8_A	355	Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774 Le		3e-13
3fi2_A	353	Crystal Structure Of Jnk3 With Amino-Pyrazole Inhib		3e-13
2r9s_A	356	C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Qu		3e-13
1ukh_A	369	Structural Basis For The Selective Inhibition Of Jn		3e-13
3vum_A	370	Crystal Structure Of A Cysteine-deficient Mutant M7		3e-13
2xrw_A	371	Linear Binding Motifs For Jnk And For Calcineurin A		3e-13
3vul_A	370	Crystal Structure Of A Cysteine-deficient Mutant M1		3e-13
2pk9_A	317	Structure Of The Pho85-pho80 Cdk-cyclin Complex Of		3e-13
3ttj_A	464	Crystal Structure Of Jnk3 Complexed With Cc-359, A		6e-13
2xs0_A	386	Linear Binding Motifs For Jnk And For Calcineurin A		7e-13
1jnk_A	423	The C-Jun N-Terminal Kinase (Jnk3s) Complexed With		7e-13
1pmn_A	364	Crystal Structure Of Jnk3 In Complex With An Imidaz		8e-13
2o0u_A	364	Crystal Structure Of Human Jnk3 Complexed With N-{3		8e-13
3oxi_A	362	Design And Synthesis Of Disubstituted Thiophene And		8e-13
2ok1_A	365	Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3		8e-13
3ptg_A	363	Design And Synthesis Of A Novel, Orally Efficacious		9e-13
3v3v_A	379	Structural And Functional Analysis Of Quercetagetin		9e-13
2exc_X	356	Inhibitor Complex Of Jnk3 Length = 356		9e-13
2b1p_A	355	Inhibitor Complex Of Jnk3 Length = 355		9e-13
4h36_A	356	Crystal Structure Of Jnk3 In Complex With Atf2 Pept		1e-12
3niz_A	311	Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5		1e-12
3nup_A	307	Cdk6 (Monomeric) In Complex With Inhibitor Length =		1e-12
2qkr_A	313	Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5		1e-12
1jow_B	308	Crystal Structure Of A Complex Of Human Cdk6 And A		1e-12
1pyx_A	422	Gsk-3 Beta Complexed With Amp-Pnp Length = 422		1e-12
1bi8_A	326	Mechanism Of G1 Cyclin Dependent Kinase Inhibition		1e-12
1q5k_A	414	Crystal Structure Of Glycogen Synthase Kinase 3 In		1e-12
1q3d_A	424	Gsk-3 Beta Complexed With Staurosporine Length = 42		1e-12
1i09_A	420	Structure Of Glycogen Synthase Kinase-3 (Gsk3b) Len		1e-12
4acc_A	465	Gsk3b In Complex With Inhibitor Length = 465		2e-12
2o5k_A	372	Crystal Structure Of Gsk3beta In Complex With A Ben		2e-12
1r0e_A	391	Glycogen Synthase Kinase-3 Beta In Complex With 3-I		2e-12
3sd0_A	350	Identification Of A Glycogen Synthase Kinase-3b Inh		2e-12
1h8f_A	352	Glycogen Synthase Kinase 3 Beta. Length = 352		2e-12
1uv5_A	350	Glycogen Synthase Kinase 3 Beta Complexed With 6-Br		2e-12
3eb0_A	383	Crystal Structure Of Cgd4_240 From Cryptosporidium		4e-12
2f9g_A	353	Crystal Structure Of Fus3 Phosphorylated On Tyr182		6e-12
4ic7_A	442	Crystal Structure Of The Erk5 Kinase Domain In Comp		6e-12
3sa0_A	360	Complex Of Erk2 With Norathyriol Length = 360		6e-12
4agu_A	311	Crystal Structure Of The Human Cdkl1 Kinase Domain		7e-12
3kn5_A	325	Crystal Structure Of The C-Terminal Kinase Domain O		7e-12
4b99_A	398	Crystal Structure Of Mapk7 (Erk5) With Inhibitor Le		7e-12
2b9f_A	353	Crystal Structure Of Non-Phosphorylated Fus3 Length		8e-12
1v0b_A	288	Crystal Structure Of The T198a Mutant Of Pfpk5 Leng		9e-12
3juh_A	335	Crystal Structure Of A Mutant Of Human Protein Kina		9e-12
1v0o_A	288	Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulpho		9e-12
4fv7_A	360	Crystal Structure Of The Erk2 Complexed With E94 Le		1e-11
3elj_A	369	Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine		1e-11
2b9h_A	353	Crystal Structure Of Fus3 With A Docking Motif From		1e-11
4eon_A	300	Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Hum		1e-11
3pze_A	358	Jnk1 In Complex With Inhibitor Length = 358		1e-11
3o17_A	370	Crystal Structure Of Jnk1-Alpha1 Isoform Length = 3		1e-11
4eom_A	301	Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Hum		1e-11
3say_A	430	Crystal Structure Of Human Glycogen Synthase Kinase		1e-11
4gsb_A	364	Monoclinic Crystal Form Of The Apo-Erk2 Length = 36		1e-11
4eop_A	300	Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3		1e-11
4eoo_A	299	Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3		1e-11
4eoi_A	299	Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyc		1e-11
4dit_A	382	Crystal Structure Of Gsk3beta In Complex With A Imi		1e-11
3rp9_A	458	Crystal Structure Of The Apo Mapk From Toxoplasma G		1e-11
1jwh_A	337	Crystal Structure Of Human Protein Kinase Ck2 Holoe		1e-11
4fux_A	360	Crystal Structure Of The Erk2 Complexed With E75 Le		1e-11
3zrk_A	371	Identification Of 2-(4-Pyridyl)thienopyridinones As		1e-11
1ob3_A	288	Structure Of P. Falciparum Pfpk5 Length = 288		1e-11
3nga_A	333	Human Ck2 Catalytic Domain In Complex With Cx-4945		1e-11
4dgl_C	335	Crystal Structure Of The Ck2 Tetrameric Holoenzyme		1e-11
2zjw_A	340	Crystal Structure Of Human Ck2 Alpha Complexed With		1e-11
4afj_A	367	5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selec		1e-11
4h3q_A	362	Crystal Structure Of Human Erk2 Complexed With A Ma		2e-11
1gng_A	378	Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With		2e-11
2r7i_A	335	Crystal Structure Of Catalytic Subunit Of Protein K		2e-11
3qyw_A	364	Crystal Structure Of Erk2 In Complex With An Inhibi		2e-11
3h30_A	334	Crystal Structure Of The Catalytic Subunit Of Human		2e-11
1pme_A	380	Structure Of Penta Mutant Human Erk2 Map Kinase Com		2e-11
1pjk_A	334	Crystal Structure Of A C-terminal Deletion Mutant O		2e-11
3mb6_A	331	Human Ck2 Catalytic Domain In Complex With A Difura		2e-11
3bqc_A	335	High Ph-Value Crystal Structure Of Emodin In Comple		2e-11
3q9w_A	336	Crystal Structure Of Human Ck2 Alpha In Complex Wit		2e-11
1na7_A	329	Crystal Structure Of The Catalytic Subunit Of Human		2e-11
3nsz_A	330	Human Ck2 Catalytic Domain In Complex With Amppn Le		2e-11
3q04_A	328	Crystal Structure Of The Apo-Form Of Human Ck2 Alph		2e-11
2g01_A	370	Pyrazoloquinolones As Novel, Selective Jnk1 Inhibit		2e-11
3tei_A	362	Crystal Structure Of Human Erk2 Complexed With A Ma		2e-11
3gb2_A	353	Gsk3beta Inhibitor Complex Length = 353		2e-11
1o9u_A	350	Glycogen Synthase Kinase 3 Beta Complexed With Axin		2e-11
2ow3_A	352	Glycogen Synthase Kinase-3 Beta In Complex With Bis		2e-11
3f88_A	349	Glycogen Synthase Kinase 3beta Inhibitor Complex Le		2e-11
3f7z_A	350	X-ray Co-crystal Structure Of Glycogen Synthase Kin		2e-11
3zdi_A	350	Glycogen Synthase Kinase 3 Beta Complexed With Axin		2e-11
4fv6_A	360	Crystal Structure Of The Erk2 Complexed With E57 Le		2e-11
3u87_A	349	Structure Of A Chimeric Construct Of Human Ck2alpha		2e-11
2y9q_A	362	Crystal Structure Of Human Erk2 Complexed With A Ma		2e-11
2ojg_A	380	Crystal Structure Of Erk2 In Complex With N,n-dimet		2e-11
3e3p_A	360	Glycogen Synthase Kinase From Leishmania Major Leng		2e-11
3zuv_A	364	Crystal Structure Of A Designed Selected Ankyrin Re		2e-11
2erk_A	365	Phosphorylated Map Kinase Erk2 Length = 365		2e-11
3o71_A	358	Crystal Structure Of Erk2DCC PEPTIDE COMPLEX Length		2e-11
1gol_A	364	Coordinates Of Rat Map Kinase Erk2 With An Arginine		2e-11
3zu7_A	365	Crystal Structure Of A Designed Selected Ankyrin Re		2e-11
2z7l_A	366	Unphosphorylated Mitogen Activated Protein Kinase E		2e-11
3c9w_A	357	Crystal Structure Of Erk-2 With Hypothemycin Covale		2e-11
2fys_B	364	Crystal Structure Of Erk2 Complex With Kim Peptide		2e-11
1vyw_A	309	Structure Of Cdk2CYCLIN A WITH PNU-292137 Length =		2e-11
2jgz_A	289	Crystal Structure Of Phospho-Cdk2 In Complex With C		2e-11
1wzy_A	368	Crystal Structure Of Human Erk2 Complexed With A Py		2e-11
1tvo_A	368	The Structure Of Erk2 In Complex With A Small Molec		2e-11
3ezr_A	300	Cdk-2 With Indazole Inhibitor 17 Bound At Its Activ		3e-11
2iw8_A	302	Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82		3e-11
4eok_A	300	Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Huma		3e-11
2gph_A	364	Docking Motif Interactions In The Map Kinase Erk2 L		3e-11
1pf8_A	298	Crystal Structure Of Human Cyclin-dependent Kinase		3e-11
4eoj_A	302	Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Huma		3e-11
4eos_A	300	Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Co		3e-11
4eoq_A	301	Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Co		3e-11
4bcq_A	301	Structure Of Cdk2 In Complex With Cyclin A And A 2-		3e-11
1ogu_A	302	Structure Of Human Thr160-phospho Cdk2/cyclin A Com		3e-11
1gii_A	298	Human Cyclin Dependent Kinase 2 Complexed With The		3e-11
2iw6_A	302	Structure Of Human Thr160-Phospho Cdk2-Cyclin A Com		3e-11
1gz8_A	299	Human Cyclin Dependent Kinase 2 Complexed With The		3e-11
4erw_A	306	Cdk2 In Complex With Staurosporine Length = 306		4e-11
4i3z_A	296	Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNES		5e-11
2w17_A	299	Cdk2 In Complex With The Imidazole Pyrimidine Amide		5e-11
1fin_A	298	Cyclin A-Cyclin-Dependent Kinase 2 Complex Length =		5e-11
3pj8_A	299	Structure Of Cdk2 In Complex With A Pyrazolo[4,3-D]		5e-11
1oir_A	299	Imidazopyridines: A Potent And Selective Class Of C		5e-11
1h01_A	298	Cdk2 In Complex With A Disubstituted 2, 4-Bis Anili		5e-11
3pxf_A	306	Cdk2 In Complex With Two Molecules Of 8-Anilino-1-N		5e-11
1qmz_A	299	Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Com		5e-11
3rgf_A	405	Crystal Structure Of Human Cdk8CYCC Length = 405		5e-11
1w98_A	298	The Structural Basis Of Cdk2 Activation By Cyclin E		5e-11
3bht_A	300	Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN		5e-11
1h1p_A	303	Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMP		6e-11
1e9h_A	297	Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex		6e-11
1jst_A	298	Phosphorylated Cyclin-Dependent Kinase-2 Bound To C		6e-11
3qhr_A	298	Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic		6e-11
3r63_A	358	Structure Of Erk2 (Spe) Mutant (S246e) Length = 358		6e-11
1oit_A	299	Imidazopyridines: A Potent And Selective Class Of C		8e-11
1ua2_A	346	Crystal Structure Of Human Cdk7 Length = 346		2e-10
2w9f_B	306	Crystal Structure Of Cdk4 In Complex With A D-Type		3e-10
4aaa_A	331	Crystal Structure Of The Human Cdkl2 Kinase Domain		3e-10
2w96_B	306	Crystal Structure Of Cdk4 In Complex With A D-Type		3e-10
3mtl_A	324	Crystal Structure Of The Pctaire1 Kinase In Complex		4e-10
2zoq_A	382	Structural Dissection Of Human Mitogen-Activated Ki		4e-10
2w99_B	306	Crystal Structure Of Cdk4 In Complex With A D-Type		4e-10
3g33_A	308	Crystal Structure Of Cdk4CYCLIN D3 Length = 308		4e-10
2acx_A	576	Crystal Structure Of G Protein Coupled Receptor Kin		1e-09
3e3b_X	339	Crystal Structure Of Catalytic Subunit Of Human Pro		1e-09
3ofm_A	350	Structure Of A Human Ck2alpha Prime, The Paralog Is		1e-09
3nyn_A	576	Crystal Structure Of G Protein-Coupled Receptor Kin		1e-09
3uib_A	362	Map Kinase Lmampk10 From Leishmania Major In Comple		3e-09
3pg1_A	362	Map Kinase Lmampk10 From Leishmania Major (1.95 Ang		3e-09
3g51_A	325	Structural Diversity Of The Active Conformation Of		3e-09
2pvh_A	352	Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]tri		3e-09
4el9_A	305	Structure Of N-Terminal Kinase Domain Of Rsk2 With		3e-09
3ubd_A	304	Structure Of N-Terminal Domain Of Rsk2 Kinase In Co		3e-09
3n9x_A	432	Crystal Structure Of Map Kinase From Plasmodium Ber		4e-09
2qc6_A	332	Protein Kinase Ck2 In Complex With Dbc Length = 332		4e-09
1m2p_A	325	Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro- Anthra		5e-09
4dgn_A	326	Crystal Structure Of Maize Ck2 In Complex With The		5e-09
4dgm_A	326	Crystal Structure Of Maize Ck2 In Complex With The		5e-09
1ds5_A	332	Dimeric Crystal Structure Of The Alpha Subunit In C		5e-09
4anm_A	335	Complex Of Ck2 With A Cdc7 Inhibitor Length = 335		5e-09
3pvg_A	331	Crystal Structure Of Z. Mays Ck2 Alpha Subunit In C		5e-09
3kxg_A	327	Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subun		5e-09
1daw_A	327	Crystal Structure Of A Binary Complex Of Protein Ki		5e-09
2z7q_A	321	Crystal Structure Of The N-Terminal Kinase Domain O		1e-08
3hx4_A	508	Crystal Structure Of Cdpk1 Of Toxoplasma Gondii, Tg		1e-08
3i79_A	484	Calcium-Dependent Protein Kinase 1 From Toxoplasma		1e-08
3ma6_A	298	Crystal Structure Of Kinase Domain Of Tgcdpk1 In Pr		1e-08
3ku2_A	507	Crystal Structure Of Inactivated Form Of Cdpk1 From		1e-08
3igo_A	486	Crystal Structure Of Cryptosporidium Parvum Cdpk1,		2e-08
1kob_A	387	Twitchin Kinase Fragment (Aplysia), Autoregulated P		2e-08
1ung_A	292	Structural Mechanism For The Inhibition Of Cdk5-P25		2e-08
3dfa_A	286	Crystal Structure Of Kinase Domain Of Calcium-depen		3e-08
2wei_A	287	Crystal Structure Of The Kinase Domain Of Cryptospo		3e-08
1h4l_A	292	Structure And Regulation Of The Cdk5-P25(Nck5a) Com		4e-08
2f57_A	317	Crystal Structure Of The Human P21-activated Kinase		5e-08
3i7c_A	484	Calcium-Dependent Protein Kinase 1 From Toxoplasma		6e-08
3gbz_A	329	Structure Of The Cmgc Cdk Kinase From Giardia Lambl		7e-08
2x4f_A	373	The Crystal Structure Of The Human Myosin Light Cha		9e-08
3lij_A	494	Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820)		9e-08
1koa_A	491	Twitchin Kinase Fragment (C.Elegans), Autoregulated		1e-07
3uto_A	573	Twitchin Kinase Region From C.Elegans (Fn31-Nl-Kin-		1e-07
3ama_A	351	Protein Kinase A Sixfold Mutant Model Of Aurora B W		1e-07
2gnf_A	350	Protein Kinase A Fivefold Mutant Model Of Rho-Kinas		1e-07
2gng_A	350	Protein Kinase A Fivefold Mutant Model Of Rho-Kinas		1e-07
2gnj_A	350	Pka Three Fold Mutant Model Of Rho-Kinase With Y-27		1e-07
3fhi_A	350	Crystal Structure Of A Complex Between The Catalyti		2e-07
4dfy_A	371	Crystal Structure Of R194a Mutant Of Camp-Dependent		2e-07
1j3h_A	350	Crystal Structure Of Apoenzyme Camp-Dependent Prote		2e-07
3l9m_A	351	Crystal Structure Of Pkab3 (Pka Triple Mutant V123a		3e-07
1szm_A	350	Dual Binding Mode Of Bisindolylmaleimide 2 To Prote		3e-07
2jdt_A	351	Structure Of Pka-Pkb Chimera Complexed With Isoquin		3e-07
2vo0_A	351	Structure Of Pka-Pkb Chimera Complexed With C-(4-(4		3e-07
2uvy_A	351	Structure Of Pka-pkb Chimera Complexed With Methyl-		3e-07
1q61_A	350	Pka Triple Mutant Model Of Pkb Length = 350		3e-07
2erz_E	351	Crystal Structure Of C-amp Dependent Kinase (pka) B		4e-07
1apm_E	350	2.0 Angstrom Refined Crystal Structure Of The Catal		4e-07
1fmo_E	350	Crystal Structure Of A Polyhistidine-Tagged Recombi		4e-07
1l3r_E	350	Crystal Structure Of A Transition State Mimic Of Th		4e-07
3pvb_A	345	Crystal Structure Of (73-244)ria:c Holoenzyme Of Ca		4e-07
2qcs_A	350	A Complex Structure Between The Catalytic And Regul		4e-07
1bkx_A	350	A Binary Complex Of The Catalytic Subunit Of Camp-D		4e-07
3qal_E	350	Crystal Structure Of Arg280ala Mutant Of Catalytic		4e-07
3agm_A	351	Complex Of Pka With The Bisubstrate Protein Kinase		4e-07
2f7e_E	351	Pka Complexed With (S)-2-(1h-Indol-3-Yl)-1-(5-Isoqu		4e-07
1jbp_E	350	Crystal Structure Of The Catalytic Subunit Of Camp-		4e-07
1xh7_A	350	Crystal Structures Of Protein Kinase B Selective In		4e-07
1ctp_E	350	Structure Of The Mammalian Catalytic Subunit Of Cam		4e-07
3nx8_A	351	Human Camp Dependent Protein Kinase In Complex With		4e-07
1cdk_A	350	Camp-Dependent Protein Kinase Catalytic Subunit (E.		4e-07
1ydt_E	350	Structure Of Camp-Dependent Protein Kinase, Alpha-C		4e-07
3agl_A	351	Complex Of Pka With The Bisubstrate Protein Kinase		4e-07
2qur_A	350	Crystal Structure Of F327aK285P MUTANT OF CAMP-Depe		4e-07
2c1a_A	351	Structure Of Camp-Dependent Protein Kinase Complexe		4e-07
1xh9_A	350	Crystal Structures Of Protein Kinase B Selective In		4e-07
1q8w_A	350	The Catalytic Subunit Of Camp-Dependent Protein Kin		4e-07
1cmk_E	350	Crystal Structures Of The Myristylated Catalytic Su		4e-07
1stc_E	350	Camp-Dependent Protein Kinase, Alpha-Catalytic Subu		4e-07
2jds_A	351	Structure Of Camp-Dependent Protein Kinase Complexe		4e-07
3dnd_A	350	Camp-Dependent Protein Kinase Pka Catalytic Subunit		4e-07
1svh_A	350	Crystal Structure Of Protein Kinase A In Complex Wi		4e-07
3mvj_A	371	Human Cyclic Amp-Dependent Protein Kinase Pka Inhib		4e-07
4dg3_E	371	Crystal Structure Of R336a Mutant Of Camp-dependent		4e-07
4dfx_E	350	Crystal Structure Of Myristoylated K7c Catalytic Su		5e-07
4ae6_A	343	Structure And Function Of The Human Sperm-specific		5e-07
4ae9_A	343	Structure And Function Of The Human Sperm-specific		5e-07
2gu8_A	337	Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel		5e-07
3nie_A	429	Crystal Structure Of Pf11_0147 Length = 429		5e-07
3is5_A	285	Crystal Structure Of Cdpk Kinase Domain From Toxopl		5e-07
2uzt_A	336	Pka Structures Of Akt, Indazole-Pyridine Inhibitors		5e-07
3pwy_A	311	Crystal Structure Of An Extender (Spd28345)-Modifie		6e-07
1q24_A	350	Pka Double Mutant Model Of Pkb In Complex With Mgat		7e-07
4a07_A	311	Human Pdk1 Kinase Domain In Complex With Allosteric		7e-07
1syk_A	350	Crystal Structure Of E230q Mutant Of Camp-Dependent		9e-07
3hrc_A	311	Crystal Structure Of A Mutant Of Human Pdk1 Kinase		1e-06
1smh_A	350	Protein Kinase A Variant Complex With Completely Or		1e-06
3rwp_A	311	Discovery Of A Novel, Potent And Selective Inhibito		1e-06
3sc1_A	311	Novel Isoquinolone Pdk1 Inhibitors Discovered Throu		1e-06
3qc4_A	314	Pdk1 In Complex With Dfg-Out Inhibitor Xxx Length =		1e-06
1uu3_A	310	Structure Of Human Pdk1 Kinase Domain In Complex Wi		1e-06
2xck_A	309	Crystal Structure Of Pdk1 In Complex With A Pyrazol		1e-06
2xch_A	309	Crystal Structure Of Pdk1 In Complex With A Pyrazol		1e-06
2qg5_A	294	Cryptosporidium Parvum Calcium Dependent Protein Ki		1e-06
3iop_A	312	Pdk-1 In Complex With The Inhibitor Compound-8i Len		1e-06
3o7l_B	350	Crystal Structure Of Phospholamban (1-19):pka C-Sub		1e-06
3h9o_A	311	Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1)		1e-06
3orx_A	316	Pdk1 Mutant Bound To Allosteric Disulfide Fragment		1e-06
3nay_A	311	Pdk1 In Complex With Inhibitor Mp6 Length = 311		1e-06
3f3z_A	277	Crystal Structure Of Cryptosporidium Parvum Calcium		1e-06
2biy_A	310	Structure Of Pdk1-S241a Mutant Kinase Domain Length		1e-06
2r7b_A	312	Crystal Structure Of The Phosphoinositide-Dependent		1e-06
3nus_A	286	Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fra		1e-06
1uu9_A	286	Structure Of Human Pdk1 Kinase Domain In Complex Wi		1e-06
1z5m_A	286	Crystal Structure Of N1-[3-[[5-bromo-2-[[3-[(1-pyrr		1e-06
4fie_A	423	Full-Length Human Pak4 Length = 423		1e-06
3nun_A	292	Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lea		1e-06
3thb_A	333	Structure Of Plk1 Kinase Domain In Complex With A B		1e-06
1h1w_A	289	High Resolution Crystal Structure Of The Human Pdk1		2e-06
2ou7_A	335	Structure Of The Catalytic Domain Of Human Polo-Lik		2e-06
4fif_A	346	Catalytic Domain Of Human Pak4 With Rpkplvdp Peptid		2e-06
2rku_A	294	Structure Of Plk1 In Complex With Bi2536 Length = 2		2e-06
3nax_A	311	Pdk1 In Complex With Inhibitor Mp7 Length = 311		2e-06
2v5q_A	315	Crystal Structure Of Wild-type Plk-1 Kinase Domain		2e-06
2q0n_A	301	Structure Of Human P21 Activating Kinase 4 (Pak4) I		2e-06
2cdz_A	303	Crystal Structure Of The Human P21-Activated Kinase		2e-06
2yac_A	311	Crystal Structure Of Polo-Like Kinase 1 In Complex		2e-06
3f69_A	311	Crystal Structure Of The Mycobacterium Tuberculosis		2e-06
3kb7_A	311	Crystal Structure Of Polo-Like Kinase 1 In Complex		2e-06
3qam_E	350	Crystal Structure Of Glu208ala Mutant Of Catalytic		2e-06
2bva_A	292	Crystal Structure Of The Human P21-Activated Kinase		2e-06
3bhh_A	295	Crystal Structure Of Human Calcium/calmodulin-depen		2e-06
3mfr_A	351	Cask-4m Cam Kinase Domain, Native Length = 351		2e-06
3d5w_A	317	Crystal Structure Of A Phosphorylated Polo-Like Kin		2e-06
2x4z_A	296	Crystal Structure Of The Human P21-Activated Kinase		2e-06
3d5u_A	317	Crystal Structure Of A Wildtype Polo-Like Kinase 1		2e-06
2qr8_A	342	2.0a X-ray Structure Of C-terminal Kinase Domain Of		3e-06
3daj_A	272	Crystal Structure Of Aurora A Complexed With An Inh		3e-06
3f61_A	311	Crystal Structure Of M. Tuberculosis Pknb Leu33aspV		3e-06
3d5v_A	317	Crystal Structure Of An Activated (Thr->asp) Polo-L		4e-06
1mru_A	311	Intracellular SerTHR PROTEIN KINASE DOMAIN OF Mycob		4e-06
1rdq_E	350	Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of		4e-06
3orm_A	311	Mycobacterium Tuberculosis Pknb Kinase Domain D76a		4e-06
3ori_A	311	Mycobacterium Tuberculosis Pknb Kinase Domain L33d		4e-06
4ec8_A	373	Structure Of Full Length Cdk9 In Complex With Cycli		4e-06
3db6_A	301	Crystal Structure Of An Activated (Thr->asp) Polo-L		4e-06
1o6y_A	299	Catalytic Domain Of Pknb Kinase From Mycobacterium		4e-06
3unz_A	279	Aurora A In Complex With Rpm1679 Length = 279		4e-06
3d14_A	272	Crystal Structure Of Mouse Aurora A (Asn186->gly, L		4e-06
3fdn_A	279	Structure-Based Drug Design Of Novel Aurora Kinase		5e-06
3mi9_A	351	Crystal Structure Of Hiv-1 Tat Complexed With Human		5e-06
2w5a_A	279	Human Nek2 Kinase Adp-Bound Length = 279		5e-06
2c6e_A	283	Aurora A Kinase Activated Mutant (T287d) In Complex		5e-06
2c6d_A	275	Aurora A Kinase Activated Mutant (T287d) In Complex		5e-06
3blh_A	331	Crystal Structure Of Human Cdk9CYCLINT1 Length = 33		5e-06
2jav_A	279	Human Kinase With Pyrrole-Indolinone Ligand Length		5e-06
4bcf_A	331	Structure Of Cdk9 In Complex With Cyclin T And A 2-		5e-06
3v8s_A	410	Human Rho-Associated Protein Kinase 1 (Rock 1) In C		5e-06
2wtv_A	285	Aurora-A Inhibitor Structure Length = 285		5e-06
1ig1_A	294	1.8a X-Ray Structure Of Ternary Complex Of A Cataly		6e-06
3lau_A	287	Crystal Structure Of Aurora2 Kinase In Complex With		6e-06
3e5a_A	268	Crystal Structure Of Aurora A In Complex With Vx-68		6e-06
3gu8_A	295	Crystal Structure Of Dapkl93g With N6-Cyclopentylad		6e-06
2wtw_A	285	Aurora-A Inhibitor Structure (2nd Crystal Form) Len		6e-06
2esm_A	415	Crystal Structure Of Rock 1 Bound To Fasudil Length		6e-06
1p4f_A	293	Death Associated Protein Kinase Catalytic Domain Wi		6e-06
2v55_A	406	Mechanism Of Multi-site Phosphorylation From A Rock		6e-06
2w4k_A	302	X-Ray Structure Of A Dap-Kinase 2-302 Length = 302		6e-06
1mq4_A	272	Crystal Structure Of Aurora-A Protein Kinase Length		6e-06
4eqm_A	294	Structural Analysis Of Staphylococcus Aureus Serine		6e-06
3o50_A	267	Crystal Structure Of Benzamide 9 Bound To Auroraa L		6e-06
3f5u_A	295	Crystal Structure Of The Death Associated Protein K		6e-06
3gu4_A	295	Crystal Structure Of Dapkq23v-Amppnp Length = 295		6e-06
2xng_A	283	Structure Of Aurora-A Bound To A Selective Imidazop		6e-06
2bmc_A	306	Aurora-2 T287d T288d Complexed With Pha-680632 Leng		6e-06
3r21_A	271	Design, Synthesis, And Biological Evaluation Of Pyr		6e-06
3dfc_B	295	Crystal Structure Of A Glycine-Rich Loop Mutant Of		6e-06
2x6d_A	285	Aurora-A Bound To An Inhibitor Length = 285		7e-06
2j50_A	280	Structure Of Aurora-2 In Complex With Pha-739358 Le		7e-06
2w1d_A	275	Structure Determination Of Aurora Kinase In Complex		7e-06
1wvw_A	278	Crystal Structures Of Kinase Domain Of Dap Kinase I		7e-06
2w4j_A	277	X-Ray Structure Of A Dap-Kinase 2-277 Length = 277		7e-06
2yak_A	285	Structure Of Death-Associated Protein Kinase 1 (Dap		7e-06
2wqe_A	262	Structure Of S155r Aurora-A Somatic Mutant Length =		7e-06
1ol5_A	282	Structure Of Aurora-A 122-403, Phosphorylated On Th		7e-06
2y0a_A	326	Structure Of Dapk1 Construct Residues 1-304 Length		7e-06
2w1c_A	275	Structure Determination Of Aurora Kinase In Complex		7e-06
2dwb_A	285	Aurora-A Kinase Complexed With Amppnp Length = 285		7e-06
2xru_A	280	Aurora-A T288e Complexed With Pha-828300 Length = 2		7e-06
3ha6_A	268	Crystal Structure Of Aurora A In Complex With Tpx2		7e-06
2clq_A	295	Structure Of Mitogen-Activated Protein Kinase Kinas		7e-06
2xzs_A	312	Death Associated Protein Kinase 1 Residues 1-312 Le		7e-06
1muo_A	297	Crystal Structure Of Aurora-2, An Oncogenic Serine-		8e-06
2x0g_A	334	X-ray Structure Of A Dap-kinase Calmodulin Complex		8e-06
2j4z_A	306	Structure Of Aurora-2 In Complex With Pha-680626 Le		8e-06
3nrm_A	283	Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibito		9e-06
3h0y_A	268	Aurora A In Complex With A Bisanilinopyrimidine Len		9e-06
2qr7_A	342	2.0a X-Ray Structure Of C-Terminal Kinase Domain Of		9e-06
1xjd_A	345	Crystal Structure Of Pkc-Theta Complexed With Staur		9e-06
3vw6_A	269	Crystal Structure Of Human Apoptosis Signal-Regulat		9e-06
2jed_A	352	The Crystal Structure Of The Kinase Domain Of The P		1e-05
2xuu_A	334	Crystal Structure Of A Dap-Kinase 1 Mutant Length =		1e-05
2xik_A	294	Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related K		1e-05
2cn5_A	329	Crystal Structure Of Human Chk2 In Complex With Adp		1e-05
3qbn_A	281	Structure Of Human Aurora A In Complex With A Diami		1e-05
2ycf_A	322	Crystal Structure Of Checkpoint Kinase 2 In Complex		1e-05
2w0j_A	323	Crystal Structure Of Chk2 In Complex With Nsc 10955		1e-05
2xk9_A	322	Structural Analysis Of Checkpoint Kinase 2 (Chk2) I		1e-05
2ycr_A	323	Crystal Structure Of Checkpoint Kinase 2 In Complex		1e-05
1s9i_A	354	X-Ray Structure Of The Human Mitogen-Activated Prot		1e-05
4a4x_A	279	Nek2-Ede Bound To Cct248662 Length = 279		1e-05
3i6u_A	419	Structure And Activation Mechanism Of The Chk2 Dna-		2e-05
3i6w_A	443	Structure And Activation Mechanism Of The Chk2 Dna-		2e-05
3q5i_A	504	Crystal Structure Of Pbanka_031420 Length = 504		2e-05
2i6l_A	320	Crystal Structure Of Human Mitogen Activated Protei		2e-05
3dxn_A	287	Crystal Structure Of The Calcium-dependent Kinase F		2e-05
3coh_A	268	Crystal Structure Of Aurora-A In Complex With A Pen		2e-05
1ol6_A	282	Structure Of Unphosphorylated D274n Mutant Of Auror		2e-05
2xne_A	272	Structure Of Aurora-A Bound To An Imidazopyrazine I		2e-05
4fg9_A	320	Crystal Structure Of Human Calcium/calmodulin-depen		2e-05
1a06_A	332	Calmodulin-Dependent Protein Kinase From Rat Length		2e-05
4fg8_A	315	Crystal Structure Of Human Calcium/calmodulin-depen		3e-05
2c30_A	321	Crystal Structure Of The Human P21-Activated Kinase		3e-05
3hzt_A	467	Crystal Structure Of Toxoplasma Gondii Cdpk3, Tgme4		3e-05
4fg7_A	293	Crystal Structure Of Human Calcium/calmodulin-depen		3e-05
3com_A	314	Crystal Structure Of Mst1 Kinase Length = 314		3e-05
3ggf_A	301	Crystal Structure Of Human SerineTHREONINE-Protein		3e-05
4gv1_A	340	Pkb Alpha In Complex With Azd5363 Length = 340		3e-05
2wel_A	327	Crystal Structure Of Su6656-Bound CalciumCALMODULIN		3e-05
3rny_A	346	Crystal Structure Of Human Rsk1 C-Terminal Kinase D		3e-05
3cqu_A	342	Crystal Structure Of Akt-1 Complexed With Substrate		3e-05
3ocb_A	341	Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor		3e-05
3a62_A	327	Crystal Structure Of Phosphorylated P70s6k1 Length		3e-05
2vn9_A	301	Crystal Structure Of Human Calcium Calmodulin Depen		3e-05
2vz6_A	313	Structure Of Human Calcium Calmodulin Dependent Pro		4e-05
3qfv_A	415	Mrck Beta In Complex With Tpca-1 Length = 415		4e-05
3tku_A	433	Mrck Beta In Complex With Fasudil Length = 433		4e-05
3a60_A	327	Crystal Structure Of Unphosphorylated P70s6k1 (Form		4e-05
2wnt_A	330	Crystal Structure Of The Human Ribosomal Protein S6		4e-05
1zrz_A	364	Crystal Structure Of The Catalytic Domain Of Atypic		4e-05
1fot_A	318	Structure Of The Unliganded Camp-Dependent Protein		4e-05
4ejn_A	446	Crystal Structure Of Autoinhibited Form Of Akt1 In		4e-05
3o96_A	446	Crystal Structure Of Human Akt1 With An Allosteric		4e-05
4dc2_A	396	Structure Of Pkc In Complex With A Substrate Peptid		5e-05
3zh8_A	349	A Novel Small Molecule Apkc Inhibitor Length = 349		5e-05
3eqc_A	360	X-Ray Structure Of The Human Mitogen-Activated Prot		5e-05
3a8w_A	345	Crystal Structure Of Pkciota Kinase Domain Length =		5e-05
3sls_A	304	Crystal Structure Of Human Mek-1 Kinase In Complex		5e-05
2h6d_A	276	Protein Kinase Domain Of The Human 5'-Amp-Activated		5e-05
2y4i_C	395	Ksr2-Mek1 Heterodimer Length = 395		5e-05
2wqm_A	310	Structure Of Apo Human Nek7 Length = 310		5e-05
2bdw_A	362	Crystal Structure Of The Auto-Inhibited Kinase Doma		6e-05
2v7o_A	336	Crystal Structure Of Human Calcium-Calmodulin-Depen		6e-05
2yza_A	276	Crystal Structure Of Kinase Domain Of Human 5'-Amp-		7e-05
2f2u_A	402	Crystal Structure Of The Rho-Kinase Kinase Domain L		7e-05
3cik_A	689	Human Grk2 In Complex With Gbetagamma Subunits Leng		7e-05
3a7f_A	303	Human Mst3 Kinase Length = 303		7e-05
1s9j_A	341	X-Ray Structure Of The Human Mitogen-Activated Prot		7e-05
3krw_A	688	Human Grk2 In Complex With Gbetgamma Subunits And B		7e-05
1yrp_A	278	Catalytic Domain Of Human Zip Kinase Phosphorylated		7e-05
3ckx_A	304	Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3		8e-05
2j90_A	304	Crystal Structure Of Human Zip Kinase In Complex Wi		8e-05
3mbl_A	328	Crystal Structure Of The Human Mitogen-Activated Pr		8e-05
3dv3_A	322	Mek1 With Pf-04622664 Bound Length = 322		8e-05
2p55_A	333	X-Ray Structure Of The Human Mitogen-Activated Prot		8e-05
1omw_A	689	Crystal Structure Of The Complex Between G Protein-		8e-05
3psc_A	695	Bovine Grk2 In Complex With Gbetagamma Subunits Len		8e-05
3orn_A	307	Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In		8e-05
3kl8_A	269	Camkiintide Inhibitor Complex Length = 269		9e-05
3ckw_A	304	Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3		9e-05
3kk9_A	282	Camkii Substrate Complex B Length = 282		9e-05
3kk8_A	284	Camkii Substrate Complex A Length = 284		9e-05
3bhy_A	283	Crystal Structure Of Human Death Associated Protein		9e-05
1wmk_A	321	Human Death-Associated Kinase Drp-1, Mutant S308d D		1e-04
3zhp_C	294	Human Mst3 (stk24) In Complex With Mo25beta Length		1e-04
2jam_A	304	Crystal Structure Of Human Calmodulin-Dependent Pro		1e-04
2a27_A	321	Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal		1e-04
4an2_A	301	Crystal Structures Of Human Mek1 With Carboxamide-B		1e-04
3dtc_A	271	Crystal Structure Of Mixed-Lineage Kinase Mlk1 Comp		1e-04
2ya9_A	361	Crystal Structure Of The Autoinhibited Form Of Mous		1e-04
3fxz_A	297	Crystal Structure Of Pak1 Kinase Domain With Ruthen		1e-04
3q52_A	306	Structure Of Phosphorylated Pak1 Kinase Domain Leng		1e-04
2y94_A	476	Structure Of An Active Form Of Mammalian Ampk Lengt		1e-04
1f3m_C	297	Crystal Structure Of Human SerineTHREONINE KINASE P		1e-04
1zws_A	288	Crystal Structure Of The Catalytic Domain Of Human		1e-04
3tac_A	361	Crystal Structure Of The Liprin-AlphaCASK COMPLEX L		1e-04
3lm0_A	327	Crystal Structure Of Human SerineTHREONINE KINASE 1		1e-04
1yhv_A	297	Crystal Structure Of Pak1 Kinase Domain With Two Po		1e-04
3soa_A	444	Full-Length Human Camkii Length = 444		1e-04
2eva_A	307	Structural Basis For The Interaction Of Tak1 Kinase		2e-04
1u5q_A	348	Crystal Structure Of The Tao2 Kinase Domain: Activa		2e-04
3c0g_A	351	Cask Cam-kinase Domain- 3'-amp Complex, P1 Form Len		2e-04
1z9x_A	321	Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal		2e-04
4gs6_A	315	Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxoz		2e-04
2zmc_A	390	Crystal Structure Of Human Mitotic Checkpoint Kinas		2e-04
2a2a_A	321	High-resolution Crystallographic Analysis Of The Au		2e-04
2wzj_A	327	Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82		2e-04
2gcd_A	309	Tao2 Kinase Domain-Staurosporine Structure Length =		2e-04
1vzo_A	355	The Structure Of The N-Terminal Kinase Domain Of Ms		2e-04
3c4w_A	543	Crystal Structure Of G Protein Coupled Receptor Kin		2e-04
3hmn_A	342	Crystal Structure Of Human Mps1 Catalytic Domain In		2e-04
3c4x_A	543	Crystal Structure Of G Protein Coupled Receptor Kin		2e-04
3t8o_A	543	Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolu		2e-04
3dbq_A	343	Crystal Structure Of Ttk Kinase Domain Length = 343		2e-04
3qc9_A	543	Crystal Structure Of Cross-Linked Bovine Grk1 T8cN4		2e-04
2h34_A	309	Apoenzyme Crystal Structure Of The Tuberculosis Ser		2e-04
3cek_A	313	Crystal Structure Of Human Dual Specificity Protein		2e-04
2x9e_A	317	Human Mps1 In Complex With Nms-P715 Length = 317		2e-04
4g31_A	299	Crystal Structure Of Gsk6414 Bound To Perk (R587-R1		2e-04
3h9f_A	313	Crystal Structure Of Human Dual Specificity Protein		3e-04
3vqu_A	320	Crystal Structure Of Human Mps1 Catalytic Domain In		3e-04
1y8g_A	327	Catalytic And Ubiqutin-Associated Domains Of Mark2P		3e-04
4apc_A	350	Crystal Structure Of Human Nima-Related Kinase 1 (N		3e-04
3iec_A	319	Helicobacter Pylori Caga Inhibits Par1MARK FAMILY K		3e-04
1zmv_A	327	Catalytic And Ubiqutin-Associated Domains Of Mark2P		3e-04
3hyh_A	275	Crystal Structure Of The Protein Kinase Domain Of Y		3e-04
2r0i_A	327	Crystal Structure Of A Kinase Mark2PAR-1 Mutant Len		3e-04
3dae_A	283	Crystal Structure Of Phosphorylated Snf1 Kinase Dom		3e-04
1zmu_A	327	Catalytic And Ubiqutin-Associated Domains Of Mark2P		3e-04
4aw2_A	437	Crystal Structure Of Cdc42 Binding Protein Kinase A		3e-04
2fh9_A	274	Structure And Dimerization Of The Kinase Domain Fro		3e-04
3q4z_A	306	Structure Of Unphosphorylated Pak1 Kinase Domain Le		3e-04
3mn3_A	271	An Inhibited Conformation For The Protein Kinase Do		3e-04
3h4j_B	336	Crystal Structure Of Pombe Ampk Kdaid Fragment Leng		3e-04
1zmw_A	327	Catalytic And Ubiqutin-Associated Domains Of Mark2P		4e-04
3ll6_A	337	Crystal Structure Of The Human Cyclin G Associated		4e-04
3e87_A	335	Crystal Structures Of The Kinase Domain Of Akt2 In		4e-04
3r1n_A	317	Mk3 Kinase Bound To Compound 5b Length = 317		4e-04
3fhr_A	336	High Resolution Crystal Structure Of Mitogen-Activa		4e-04
2jdo_A	342	Structure Of Pkb-Beta (Akt2) Complexed With Isoquin		4e-04
1o6l_A	337	Crystal Structure Of An Activated Akt/protein Kinas		4e-04
2phk_A	277	The Crystal Structure Of A Phosphorylase Kinase Pep		4e-04
1gzn_A	335	Structure Of Pkb Kinase Domain Length = 335		5e-04
1o6k_A	336	Structure Of Activated Form Of Pkb Kinase Domain S4		5e-04
1mrv_A	339	Crystal Structure Of An Inactive Akt2 Kinase Domain		5e-04
3rzf_A	677	Crystal Structure Of Inhibitor Of Kappab Kinase Bet		5e-04
3fe3_A	328	Crystal Structure Of The Kinase Mark3PAR-1: T211a-S		5e-04
1phk_A	298	Two Structures Of The Catalytic Domain Of Phosphory		5e-04
3qa8_A	676	Crystal Structure Of Inhibitor Of Kappa B Kinase Be		5e-04
2zmd_A	390	Crystal Structure Of Human Mps1 Catalytic Domain T6		5e-04
2hak_A	328	Catalytic And Ubiqutin-Associated Domains Of Mark1P		5e-04
1gzk_A	315	Molecular Mechanism For The Regulation Of Protein K		5e-04
3fpm_A	325	Crystal Structure Of A Squarate Inhibitor Bound To		5e-04
4fl3_A	635	Structural And Biophysical Characterization Of The		5e-04
3gok_A	334	Binding Site Mapping Of Protein Ligands Length = 33		5e-04
1kwp_A	400	Crystal Structure Of Mapkap2 Length = 400		5e-04
2qnj_A	328	Kinase And Ubiquitin-Associated Domains Of Mark3PAR		5e-04
2pzy_A	324	Structure Of Mk2 Complexed With Compound 76 Length		5e-04
2jbo_A	326	Protein Kinase Mk2 In Complex With An Inhibitor (Cr		6e-04
4fl2_A	636	Structural And Biophysical Characterization Of The		6e-04
2oza_A	356	Structure Of P38alpha Complex Length = 356		6e-04
2onl_C	406	Crystal Structure Of The P38a-Mapkap Kinase 2 Heter		6e-04
4dfl_A	274	Crystal Structure Of Spleen Tyrosine Kinase Complex		6e-04
3qd2_B	332	Crsytal Structure Of Mouse Perk Kinase Domain Lengt		6e-04
3r2y_A	319	Mk2 Kinase Bound To Compound 1 Length = 319		6e-04
4f4p_A	273	Syk In Complex With Ligand Lasw836 Length = 273		6e-04
2p3g_X	327	Crystal Structure Of A Pyrrolopyridine Inhibitor Bo		6e-04
3srv_B	277	Crystal Structure Of Spleen Tyrosine Kinase (Syk) I		6e-04
3emg_A	291	Discovery And Sar Of Novel 4-Thiazolyl-2- Phenylami		6e-04
3r2b_A	318	Mk2 Kinase Bound To Compound 5b Length = 318		6e-04
1xba_A	291	Crystal Structure Of Apo Syk Tyrosine Kinase Domain		7e-04
3tub_A	293	Crystal Structure Of Syk Kinase Domain With 1-(5-(6		7e-04
3vf8_A	299	Crystal Structure Of Spleen Tyrosine Kinase Syk Cat		7e-04
4fr4_A	384	Crystal Structure Of Human SerineTHREONINE-Protein		8e-04
3ugc_A	295	Structural Basis Of Jak2 Inhibition By The Type Ii		8e-04
1ql6_A	298	The Catalytic Mechanism Of Phosphorylase Kinase Pro		9e-04

>pdb|3NR9|A Chain A, Structure Of Human Cdc2-Like Kinase 2 (Clk2) Length = 368

Iteration: 1
 Score =  186 bits (471), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 103/243 (42%), Positives = 143/243 (58%), Gaps = 42/243 (17%)
Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           +HD  + HTDLKPEN+L V+S+Y    +   +L   +D    +R  KS+A++V+DFGS T
Sbjct: 153 LHDNKLTHTDLKPENILFVNSDY----ELTYNLEKKRD----ERSVKSTAVRVVDFGSAT 204
Query: 65  YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAM 124
           ++    + IVSTRHYRAPEVIL LGW+ PCD+WS+GCI+ E   G  LFQTH+N EHLAM
Sbjct: 205 FDHEHHSTIVSTRHYRAPEVILELGWSQPCDVWSIGCIIFEYYVGFTLFQTHDNREHLAM 264
Query: 125 MERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVPFFYGSFV 184
           MER+LGP+P  M+++  +  +KY  RGRLDW E  ++                   G +V
Sbjct: 265 MERILGPIPSRMIRKTRK--QKYFYRGRLDWDENTSA-------------------GRYV 303
Query: 185 EFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPF 244
             +  C   R         + L  +  +H    L  L++ +L Y+P  RLT  EAL+HPF
Sbjct: 304 --RENCKPLR---------RYLTSEAEEHHQ--LFDLIESMLEYEPAKRLTLGEALQHPF 350
Query: 245 FTR 247
           F R
Sbjct: 351 FAR 353

>pdb|1Z57|A Chain A, Crystal Structure Of Human Clk1 In Complex With 10z-Hymenialdisine Length = 339

Iteration: 1
 Score =  177 bits (450), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 101/241 (41%), Positives = 139/241 (57%), Gaps = 42/241 (17%)
Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           +H   + HTDLKPEN+L V S+Y +  + K      +D    +R   +  IKV+DFGS T
Sbjct: 134 LHSNKLTHTDLKPENILFVQSDYTEAYNPK----IKRD----ERTLINPDIKVVDFGSAT 185
Query: 65  YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAM 124
           Y+    + +VSTRHYRAPEVIL LGW+ PCD+WS+GCIL+E   G  +F TH++ EHLAM
Sbjct: 186 YDDEHHSTLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTHDSKEHLAM 245
Query: 125 MERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVPFFYGSFV 184
           MER+LGPLP+HM+++  +   KY    RLDW E +++                   G +V
Sbjct: 246 MERILGPLPKHMIQKTRK--RKYFHHDRLDWDEHSSA-------------------GRYV 284
Query: 185 EFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPF 244
                    R    +  F   ++ Q V+H    L  L+Q +L YDP  R+T REAL+HPF
Sbjct: 285 S--------RACKPLKEF---MLSQDVEHER--LFDLIQKMLEYDPAKRITLREALKHPF 331
Query: 245 F 245
           F
Sbjct: 332 F 332

>pdb|2VAG|A Chain A, Crystal Structure Of Di-Phosphorylated Human Clk1 In Complex With A Novel Substituted Indole Inhibitor Length = 339

Iteration: 1
 Score =  174 bits (440), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 99/241 (41%), Positives = 137/241 (56%), Gaps = 42/241 (17%)
Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           +H   + HTDLKPEN+L V S+Y +  + K      +D    +R   +  IKV+DFGS T
Sbjct: 134 LHSNKLTHTDLKPENILFVQSDYTEAYNPK----IKRD----ERTLINPDIKVVDFGSAT 185
Query: 65  YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAM 124
           Y+    + +V  RHYRAPEVIL LGW+ PCD+WS+GCIL+E   G  +F TH++ EHLAM
Sbjct: 186 YDDEHHSTLVXXRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTHDSKEHLAM 245
Query: 125 MERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVPFFYGSFV 184
           MER+LGPLP+HM+++  +   KY    RLDW E +++                   G +V
Sbjct: 246 MERILGPLPKHMIQKTRK--RKYFHHDRLDWDEHSSA-------------------GRYV 284
Query: 185 EFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPF 244
                    R    +  F   ++ Q V+H    L  L+Q +L YDP  R+T REAL+HPF
Sbjct: 285 S--------RACKPLKEF---MLSQDVEHER--LFDLIQKMLEYDPAKRITLREALKHPF 331
Query: 245 F 245
           F
Sbjct: 332 F 332

>pdb|2WU6|A Chain A, Crystal Structure Of The Human Clk3 In Complex With Dki Length = 381

Iteration: 1
 Score =  168 bits (426), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 95/242 (39%), Positives = 132/242 (54%), Gaps = 42/242 (17%)
Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           +H+  + HTDLKPEN+L V+SE+        +L+    S   K + K+++I+V DFGS T
Sbjct: 171 LHENQLTHTDLKPENILFVNSEF-------ETLYNEHKSCEEKSV-KNTSIRVADFGSAT 222
Query: 65  YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAM 124
           ++      IV+TRHYR PEVIL LGW  PCD+WS+GCIL E   G  LFQTHEN EHL M
Sbjct: 223 FDHEHHTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTHENREHLVM 282
Query: 125 MERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVPFFYGSFV 184
           ME++LGP+P HM+ R  +  +KY  +G L W E ++    +K   K              
Sbjct: 283 MEKILGPIPSHMIHRTRK--QKYFYKGGLVWDENSSDGRYVKENCK-------------- 326
Query: 185 EFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPF 244
                         + S+     ++HV      L  L++ +L +DP  R+T  EAL HPF
Sbjct: 327 -------------PLKSYMLQDSLEHV-----QLFDLMRRMLEFDPAQRITLAEALLHPF 368
Query: 245 FT 246
           F 
Sbjct: 369 FA 370

>pdb|2EXE|A Chain A, Crystal Structure Of The Phosphorylated Clk3 Length = 357

Iteration: 1
 Score =  168 bits (426), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 95/242 (39%), Positives = 132/242 (54%), Gaps = 42/242 (17%)
Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           +H+  + HTDLKPEN+L V+SE+        +L+    S   K + K+++I+V DFGS T
Sbjct: 148 LHENQLTHTDLKPENILFVNSEF-------ETLYNEHKSCEEKSV-KNTSIRVADFGSAT 199
Query: 65  YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAM 124
           ++      IV+TRHYR PEVIL LGW  PCD+WS+GCIL E   G  LFQTHEN EHL M
Sbjct: 200 FDHEHHTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTHENREHLVM 259
Query: 125 MERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVPFFYGSFV 184
           ME++LGP+P HM+ R  +  +KY  +G L W E ++    +K   K              
Sbjct: 260 MEKILGPIPSHMIHRTRK--QKYFYKGGLVWDENSSDGRYVKENCK-------------- 303
Query: 185 EFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPF 244
                         + S+     ++HV      L  L++ +L +DP  R+T  EAL HPF
Sbjct: 304 -------------PLKSYMLQDSLEHV-----QLFDLMRRMLEFDPAQRITLAEALLHPF 345
Query: 245 FT 246
           F 
Sbjct: 346 FA 347

>pdb|2EU9|A Chain A, Crystal Structure Of Clk3 Length = 355

Iteration: 1
 Score =  168 bits (426), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 95/242 (39%), Positives = 132/242 (54%), Gaps = 42/242 (17%)
Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           +H+  + HTDLKPEN+L V+SE+        +L+    S   K + K+++I+V DFGS T
Sbjct: 139 LHENQLTHTDLKPENILFVNSEF-------ETLYNEHKSCEEKSV-KNTSIRVADFGSAT 190
Query: 65  YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAM 124
           ++      IV+TRHYR PEVIL LGW  PCD+WS+GCIL E   G  LFQTHEN EHL M
Sbjct: 191 FDHEHHTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTHENREHLVM 250
Query: 125 MERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVPFFYGSFV 184
           ME++LGP+P HM+ R  +  +KY  +G L W E ++    +K   K              
Sbjct: 251 MEKILGPIPSHMIHRTRK--QKYFYKGGLVWDENSSDGRYVKENCK-------------- 294
Query: 185 EFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPF 244
                         + S+     ++HV      L  L++ +L +DP  R+T  EAL HPF
Sbjct: 295 -------------PLKSYMLQDSLEHV-----QLFDLMRRMLEFDPAQRITLAEALLHPF 336
Query: 245 FT 246
           F 
Sbjct: 337 FA 338

>pdb|3LLT|A Chain A, Crystal Structure Of Pf14_0431, Kinase Domain Length = 360

Iteration: 1
 Score =  147 bits (370), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 80/180 (44%), Positives = 113/180 (62%), Gaps = 14/180 (7%)
Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRM----PKSSAIKVIDF 60
           +  + + HTDLKPEN+LL        P ++ SL T +  +  K++     KS+ IK+IDF
Sbjct: 153 LRKMSLTHTDLKPENILLDD------PYFEKSLITVRRVTDGKKIQIYRTKSTGIKLIDF 206
Query: 61  GSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLE 120
           G  T++      I++TR YRAPEVIL LGW    D+WS GC+L EL TG  LF+THE++E
Sbjct: 207 GCATFKSDYHGSIINTRQYRAPEVILNLGWDVSSDMWSFGCVLAELYTGSLLFRTHEHME 266
Query: 121 HLAMMERVLGPLPQHMLKRVDR-HAEKYVRRG--RLDWPEGAASRESIKSVMK-LPRLQV 176
           HLAMME ++ P+P++ML    + +  KYV +   +L WPE A+S  SIK V K LP  ++
Sbjct: 267 HLAMMESIIQPIPKNMLYEATKTNGSKYVNKDELKLAWPENASSINSIKHVKKCLPLYKI 326

>pdb|3ANQ|A Chain A, Human Dyrk1aINHIBITOR COMPLEX Length = 368

Iteration: 1
 Score = 94.0 bits (232), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 70/251 (27%), Positives = 111/251 (44%), Gaps = 47/251 (18%)
Query: 1   MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDF 60
           +F    +L +IH DLKPEN+LL +                         PK SAIK++DF
Sbjct: 152 LFLATPELSIIHCDLKPENILLCN-------------------------PKRSAIKIVDF 186
Query: 61  GSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLE 120
           GS+          + +R YR+PEV+LG+ +    D+WS+GCILVE+ TGE LF     ++
Sbjct: 187 GSSCQLGQRIYQXIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGANEVD 246
Query: 121 HLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPR----LQV 176
            +  +  VLG  P H+L +  + A K+  +     P+G  + +  K   +  +     ++
Sbjct: 247 QMNKIVEVLGIPPAHILDQAPK-ARKFFEK----LPDGTWNLKKTKDGKREYKPPGTRKL 301
Query: 177 PFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTA 236
               G      G   A      +A + +                L+  +L YDP  R+  
Sbjct: 302 HNILGVETGGPGGRRAGESGHTVADYLK-------------FKDLILRMLDYDPKTRIQP 348
Query: 237 REALRHPFFTR 247
             AL+H FF +
Sbjct: 349 YYALQHSFFKK 359

>pdb|2VX3|A Chain A, Crystal Structure Of The Human Dual Specificity Tyrosine- Phosphorylation-Regulated Kinase 1a Length = 382

Iteration: 1
 Score = 94.0 bits (232), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 70/251 (27%), Positives = 111/251 (44%), Gaps = 47/251 (18%)
Query: 1   MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDF 60
           +F    +L +IH DLKPEN+LL +                         PK SAIK++DF
Sbjct: 171 LFLATPELSIIHCDLKPENILLCN-------------------------PKRSAIKIVDF 205
Query: 61  GSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLE 120
           GS+          + +R YR+PEV+LG+ +    D+WS+GCILVE+ TGE LF     ++
Sbjct: 206 GSSCQLGQRIYQXIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGANEVD 265
Query: 121 HLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPR----LQV 176
            +  +  VLG  P H+L +  + A K+  +     P+G  + +  K   +  +     ++
Sbjct: 266 QMNKIVEVLGIPPAHILDQAPK-ARKFFEK----LPDGTWNLKKTKDGKREYKPPGTRKL 320
Query: 177 PFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTA 236
               G      G   A      +A + +                L+  +L YDP  R+  
Sbjct: 321 HNILGVETGGPGGRRAGESGHTVADYLK-------------FKDLILRMLDYDPKTRIQP 367
Query: 237 REALRHPFFTR 247
             AL+H FF +
Sbjct: 368 YYALQHSFFKK 378

>pdb|4AZE|A Chain A, Human Dyrk1a In Complex With Leucettine L41 Length = 382

Iteration: 1
 Score = 92.0 bits (227), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 69/251 (27%), Positives = 110/251 (43%), Gaps = 47/251 (18%)
Query: 1   MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDF 60
           +F    +L +IH DLKPEN+LL +                         PK  AIK++DF
Sbjct: 171 LFLATPELSIIHCDLKPENILLCN-------------------------PKRXAIKIVDF 205
Query: 61  GSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLE 120
           GS+          + +R YR+PEV+LG+ +    D+WS+GCILVE+ TGE LF     ++
Sbjct: 206 GSSCQLGQRIYQXIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGANEVD 265
Query: 121 HLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPR----LQV 176
            +  +  VLG  P H+L +  + A K+  +     P+G  + +  K   +  +     ++
Sbjct: 266 QMNKIVEVLGIPPAHILDQAPK-ARKFFEK----LPDGTWNLKKTKDGKREYKPPGTRKL 320
Query: 177 PFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTA 236
               G      G   A      +A + +                L+  +L YDP  R+  
Sbjct: 321 HNILGVETGGPGGRRAGESGHTVADYLK-------------FKDLILRMLDYDPKTRIQP 367
Query: 237 REALRHPFFTR 247
             AL+H FF +
Sbjct: 368 YYALQHSFFKK 378

>pdb|3KVW|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine Phosphorylation Regulated Kinase 2 (Dyrk2) In Complex With An Indirubin Ligand Length = 429

Iteration: 1
 Score = 91.3 bits (225), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 75/246 (30%), Positives = 100/246 (40%), Gaps = 48/246 (19%)
Query: 4   VMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGST 63
            +H   +IH DLKPEN+LL                         +    S IKVIDFGS+
Sbjct: 215 ALHKNRIIHCDLKPENILL-------------------------KQQGRSGIKVIDFGSS 249
Query: 64  TYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLA 123
            YE       + +R YRAPEVILG  +  P D+WS+GCIL EL TG  L    +  + LA
Sbjct: 250 CYEHQRVYTXIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPGEDEGDQLA 309
Query: 124 MMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPR--LQVPFFYG 181
            M  +LG +P   L    + A+ +V                  S    PR         G
Sbjct: 310 CMIELLG-MPSQKLLDASKRAKNFV------------------SXKGYPRYCTVTTLSDG 350
Query: 182 SFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALR 241
           S V   G     +      S      ++  D         L+  L +DP  R+T  +ALR
Sbjct: 351 SVVLNGGRSRRGKLRGPPESREWGNALKGCDDPL--FLDFLKQCLEWDPAVRMTPGQALR 408
Query: 242 HPFFTR 247
           HP+  R
Sbjct: 409 HPWLRR 414

>pdb|3K2L|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine Phosphorylation Regulated Kinase 2 (Dyrk2) Length = 429

Iteration: 1
 Score = 91.3 bits (225), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 75/246 (30%), Positives = 100/246 (40%), Gaps = 48/246 (19%)
Query: 4   VMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGST 63
            +H   +IH DLKPEN+LL                         +    S IKVIDFGS+
Sbjct: 215 ALHKNRIIHCDLKPENILL-------------------------KQQGRSGIKVIDFGSS 249
Query: 64  TYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLA 123
            YE       + +R YRAPEVILG  +  P D+WS+GCIL EL TG  L    +  + LA
Sbjct: 250 CYEHQRVYXXIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPGEDEGDQLA 309
Query: 124 MMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPR--LQVPFFYG 181
            M  +LG +P   L    + A+ +V                  S    PR         G
Sbjct: 310 CMIELLG-MPXQKLLDASKRAKNFV------------------SXKGYPRYCTVTTLSDG 350
Query: 182 SFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALR 241
           S V   G     +      S      ++  D         L+  L +DP  R+T  +ALR
Sbjct: 351 SVVLNGGRSRRGKLRGPPESREWGNALKGCDDPL--FLDFLKQCLEWDPAVRMTPGQALR 408
Query: 242 HPFFTR 247
           HP+  R
Sbjct: 409 HPWLRR 414

>pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41 Length = 417

Iteration: 1
 Score = 90.9 bits (224), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 75/246 (30%), Positives = 100/246 (40%), Gaps = 48/246 (19%)
Query: 4   VMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGST 63
            +H   +IH DLKPEN+LL                         +    S IKVIDFGS+
Sbjct: 215 ALHKNRIIHCDLKPENILL-------------------------KQQGRSGIKVIDFGSS 249
Query: 64  TYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLA 123
            YE       + +R YRAPEVILG  +  P D+WS+GCIL EL TG  L    +  + LA
Sbjct: 250 CYEHQRVYTXIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPGEDEGDQLA 309
Query: 124 MMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPR--LQVPFFYG 181
            M  +LG +P   L    + A+ +V                  S    PR         G
Sbjct: 310 CMIELLG-MPSQKLLDASKRAKNFV------------------SXKGYPRYCTVTTLSDG 350
Query: 182 SFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALR 241
           S V   G     +      S      ++  D         L+  L +DP  R+T  +ALR
Sbjct: 351 SVVLNGGRSRRGKLRGPPESREWGNALKGCDDPL--FLDFLKQCLEWDPAVRMTPGQALR 408
Query: 242 HPFFTR 247
           HP+  R
Sbjct: 409 HPWLRR 414

>pdb|3BEG|A Chain A, Crystal Structure Of Sr Protein Kinase 1 Complexed To Its Substrate AsfSF2 Length = 381

Iteration: 1
 Score = 87.0 bits (214), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 72/272 (26%), Positives = 113/272 (41%), Gaps = 67/272 (24%)
Query: 5   MHDLC-MIHTDLKPENVLL-VSSEYIK-----VPDYKSSLHTPKDSSYFKRMPKSSA--- 54
           +H  C +IHTD+KPEN+LL V+ +YI+       +++ S   P   S     P ++    
Sbjct: 146 LHTKCRIIHTDIKPENILLSVNEQYIRRLAAEATEWQRSGAPPPSGSAVSTAPATAGNFL 205
Query: 55  -------------IKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGC 101
                        +K+ D G+  +        + TR YR+ EV++G G+  P DIWS  C
Sbjct: 206 VNPLEPKNAEKLKVKIADLGNACWVHKHFTEDIQTRQYRSLEVLIGSGYNTPADIWSTAC 265
Query: 102 ILVELCTGEALFQTHENLE------HLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDW 155
           +  EL TG+ LF+ H   E      H+A++  +LG +P+ ++       E + ++G L  
Sbjct: 266 MAFELATGDYLFEPHSGEEYTRDEDHIALIIELLGKVPRKLIVAGKYSKEFFTKKGDL-- 323
Query: 156 PEGAASRESIKSVMKLPRLQVPFFYGSF-VEFKGYCLAFRCTDCIASFCQNLIMQHVDHS 214
                     K + KL        +G F V  + Y                   +     
Sbjct: 324 ----------KHITKLKP------WGLFEVLVEKY-------------------EWSQEE 348
Query: 215 AGDLTHLLQGLLRYDPTDRLTAREALRHPFFT 246
           A   T  L  +L   P  R TA E LRHP+  
Sbjct: 349 AAGFTDFLLPMLELIPEKRATAAECLRHPWLN 380

>pdb|1WBP|A Chain A, Srpk1 Bound To 9mer Docking Motif Peptide Length = 397

Iteration: 1
 Score = 87.0 bits (214), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 72/272 (26%), Positives = 113/272 (41%), Gaps = 67/272 (24%)
Query: 5   MHDLC-MIHTDLKPENVLL-VSSEYIK-----VPDYKSSLHTPKDSSYFKRMPKSSA--- 54
           +H  C +IHTD+KPEN+LL V+ +YI+       +++ S   P   S     P ++    
Sbjct: 162 LHTKCRIIHTDIKPENILLSVNEQYIRRLAAEATEWQRSGAPPPSGSAVSTAPATAGNFL 221
Query: 55  -------------IKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGC 101
                        +K+ D G+  +        + TR YR+ EV++G G+  P DIWS  C
Sbjct: 222 VNPLEPKNAEKLKVKIADLGNACWVHKHFTEDIQTRQYRSLEVLIGSGYNTPADIWSTAC 281
Query: 102 ILVELCTGEALFQTHENLE------HLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDW 155
           +  EL TG+ LF+ H   E      H+A++  +LG +P+ ++       E + ++G L  
Sbjct: 282 MAFELATGDYLFEPHSGEEYTRDEDHIALIIELLGKVPRKLIVAGKYSKEFFTKKGDL-- 339
Query: 156 PEGAASRESIKSVMKLPRLQVPFFYGSF-VEFKGYCLAFRCTDCIASFCQNLIMQHVDHS 214
                     K + KL        +G F V  + Y                   +     
Sbjct: 340 ----------KHITKLKP------WGLFEVLVEKY-------------------EWSQEE 364
Query: 215 AGDLTHLLQGLLRYDPTDRLTAREALRHPFFT 246
           A   T  L  +L   P  R TA E LRHP+  
Sbjct: 365 AAGFTDFLLPMLELIPEKRATAAECLRHPWLN 396

>pdb|2X7G|A Chain A, Structure Of Human Serine-Arginine-Rich Protein-Specific Kinase 2 (Srpk2) Bound To Purvalanol B Length = 389

Iteration: 1
 Score = 85.9 bits (211), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 69/269 (25%), Positives = 110/269 (40%), Gaps = 63/269 (23%)
Query: 5   MHDLC-MIHTDLKPENVLL-VSSEYIK-----VPDYKSSLHTPKDSSYFKRMPKSSA--- 54
           +H  C +IHTD+KPEN+L+ V   Y++       +++ +   P   S     P +     
Sbjct: 156 LHSKCKIIHTDIKPENILMCVDDAYVRRMAAEATEWQKAGAPPPSGSAVSTAPAADLLVN 215
Query: 55  -----------IKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCIL 103
                      +K+ D G+  +        + TR YR+ EV++G G++ P DIWS  C+ 
Sbjct: 216 PLDPRNADKIRVKIADLGNACWVHKHFTEDIQTRQYRSIEVLIGAGYSTPADIWSTACMA 275
Query: 104 VELCTGEALFQTHE------NLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPE 157
            EL TG+ LF+ H       + +H+A +  +LG +P+H         E + RRG L    
Sbjct: 276 FELATGDYLFEPHSGEDYSRDEDHIAHIIELLGSIPRHFALSGKYSREFFNRRGEL---- 331
Query: 158 GAASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGD 217
                        + +L+    +   VE  G+                    H D  A  
Sbjct: 332 -----------RHITKLKPWSLFDVLVEKYGW-------------------PHED--AAQ 359
Query: 218 LTHLLQGLLRYDPTDRLTAREALRHPFFT 246
            T  L  +L   P  R +A E LRHP+  
Sbjct: 360 FTDFLIPMLEMVPEKRASAGECLRHPWLN 388

>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum, Cgd2_1960 Length = 388

Iteration: 1
 Score = 79.7 bits (195), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 67/248 (27%), Positives = 117/248 (47%), Gaps = 45/248 (18%)
Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           +H   ++H D+KP N+LL +  ++KV D+  S            +P S      +F    
Sbjct: 125 LHSGGLLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNIPLSINENTENFDD-- 182
Query: 65  YERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLA 123
            ++P     V+TR YRAPE++LG   +T   D+WS+GCIL E+  G+ +F     +  L 
Sbjct: 183 -DQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGSSTMNQL- 240
Query: 124 MMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVPFFYGSF 183
             ER++G                      +D+P    S E ++S+      Q P F  + 
Sbjct: 241 --ERIIGV---------------------IDFP----SNEDVESI------QSP-FAKTM 266
Query: 184 VEFKGYCLAFRCTDCIASFC--QNLIMQHVDHSAG---DLTHLLQGLLRYDPTDRLTARE 238
           +E     +  R ++    F   +NL+++ ++  A    +   LL  LL+++P  R++A +
Sbjct: 267 IESLKEKVEIRQSNKRDIFTKWKNLLLK-INPKADCNEEALDLLDKLLQFNPNKRISAND 325
Query: 239 ALRHPFFT 246
           AL+HPF +
Sbjct: 326 ALKHPFVS 333

>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha Length = 389

Iteration: 1
 Score = 79.3 bits (194), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 63/246 (25%), Positives = 102/246 (41%), Gaps = 75/246 (30%)
Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           +H   +IH DLKP N+ +                            +   +K++DFG   
Sbjct: 170 IHSADIIHRDLKPSNLAV---------------------------NEDCELKILDFGLAR 202
Query: 65  YERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLA 123
           +   +    V+TR YRAPE++L  + +    DIWSVGCI+ EL TG  LF   +++  L 
Sbjct: 203 HTDDEMTGYVATRWYRAPEIMLNWMHYNMTVDIWSVGCIMAELLTGRTLFPGTDHINQLQ 262
Query: 124 MMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVPFFYGSF 183
            + R+ G  P  ++ R+  H                 +R  I S+ ++P+          
Sbjct: 263 QIMRLTGTPPASVISRMPSH----------------EARNYINSLPQMPK---------- 296
Query: 184 VEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHP 243
              + +   F   + +A          VD        LL+ +L  D   R+TA EAL HP
Sbjct: 297 ---RNFADVFIGANPLA----------VD--------LLEKMLVLDTDKRITASEALAHP 335
Query: 244 FFTRDH 249
           +F++ H
Sbjct: 336 YFSQYH 341

>pdb|1Q8Y|A Chain A, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With Bound Adp Length = 373

Iteration: 1
 Score = 79.0 bits (193), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 48/142 (33%), Positives = 71/142 (50%), Gaps = 28/142 (19%)
Query: 5   MHDLC-MIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGST 63
           MH  C +IHTD+KPENVL+   E +  P+                      IK+ D G+ 
Sbjct: 147 MHRRCGIIHTDIKPENVLM---EIVDSPE------------------NLIQIKIADLGNA 185
Query: 64  TYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHE------ 117
            +        + TR YR+PEV+LG  W    DIWS  C++ EL TG+ LF+  E      
Sbjct: 186 CWYDEHYTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTK 245
Query: 118 NLEHLAMMERVLGPLPQHMLKR 139
           + +H+A +  +LG LP ++L+ 
Sbjct: 246 DDDHIAQIIELLGELPSYLLRN 267

>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis Length = 394

Iteration: 1
 Score = 79.0 bits (193), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 72/256 (28%), Positives = 101/256 (39%), Gaps = 86/256 (33%)
Query: 2   FAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG 61
            A +H + + H D+KP+N+LL                           P S  +K+IDFG
Sbjct: 154 LAYIHSIGICHRDIKPQNLLL--------------------------DPPSGVLKLIDFG 187
Query: 62  STTY---ERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHE 117
           S        P+ + I S R+YRAPE+I G   +T   DIWS GC++ EL  G+ LF    
Sbjct: 188 SAKILIAGEPNVSXICS-RYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGES 246
Query: 118 NLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVP 177
            ++ L  + +VL                            G  SRE IK+      +   
Sbjct: 247 GIDQLVEIIKVL----------------------------GTPSREQIKT------MNPN 272
Query: 178 FFYGSFVEFK--GYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLT 235
           +    F + +   +   FR                   +  D   L+  LL Y P+ RLT
Sbjct: 273 YMEHKFPQIRPHPFSKVFR-----------------PRTPPDAIDLISRLLEYTPSARLT 315
Query: 236 AREALRHPFFTRDHLR 251
           A EAL HPFF  D LR
Sbjct: 316 AIEALCHPFF--DELR 329

>pdb|1HOW|A Chain A, The X-Ray Crystal Structure Of Sky1p, An Sr Protein Kinase In Yeast Length = 373

Iteration: 1
 Score = 79.0 bits (193), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 48/142 (33%), Positives = 71/142 (50%), Gaps = 28/142 (19%)
Query: 5   MHDLC-MIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGST 63
           MH  C +IHTD+KPENVL+   E +  P+                      IK+ D G+ 
Sbjct: 147 MHRRCGIIHTDIKPENVLM---EIVDSPE------------------NLIQIKIADLGNA 185
Query: 64  TYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHE------ 117
            +        + TR YR+PEV+LG  W    DIWS  C++ EL TG+ LF+  E      
Sbjct: 186 CWYDEHYTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTK 245
Query: 118 NLEHLAMMERVLGPLPQHMLKR 139
           + +H+A +  +LG LP ++L+ 
Sbjct: 246 DDDHIAQIIELLGELPSYLLRN 267

>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk Docking Peptide Length = 362

Iteration: 1
 Score = 79.0 bits (193), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 59/246 (23%), Positives = 103/246 (41%), Gaps = 75/246 (30%)
Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           +H   +IH DLKP N+                            + + S +K++DFG   
Sbjct: 143 IHSADIIHRDLKPSNL---------------------------AVNEDSELKILDFGLAR 175
Query: 65  YERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLA 123
           +   +    V+TR YRAPE++L  + +    DIWSVGCI+ EL TG  LF   ++++ L 
Sbjct: 176 HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLK 235
Query: 124 MMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVPFFYGSF 183
           ++ R++G     +LK++                   ++R  I+S+ ++P++         
Sbjct: 236 LILRLVGTPGAELLKKI----------------SSESARNYIQSLTQMPKM--------- 270
Query: 184 VEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHP 243
                +   F   + +A                    LL+ +L  D   R+TA +AL H 
Sbjct: 271 ----NFANVFIGANPLA------------------VDLLEKMLVLDSDKRITAAQALAHA 308
Query: 244 FFTRDH 249
           +F + H
Sbjct: 309 YFAQYH 314

>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A Dihydroquinolinone Length = 366

Iteration: 1
 Score = 79.0 bits (193), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 59/246 (23%), Positives = 103/246 (41%), Gaps = 75/246 (30%)
Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           +H   +IH DLKP N+                            + + S +K++DFG   
Sbjct: 147 IHSADIIHRDLKPSNL---------------------------AVNEDSELKILDFGLAR 179
Query: 65  YERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLA 123
           +   +    V+TR YRAPE++L  + +    DIWSVGCI+ EL TG  LF   ++++ L 
Sbjct: 180 HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLK 239
Query: 124 MMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVPFFYGSF 183
           ++ R++G     +LK++                   ++R  I+S+ ++P++         
Sbjct: 240 LILRLVGTPGAELLKKI----------------SSESARNYIQSLTQMPKM--------- 274
Query: 184 VEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHP 243
                +   F   + +A                    LL+ +L  D   R+TA +AL H 
Sbjct: 275 ----NFANVFIGANPLA------------------VDLLEKMLVLDSDKRITAAQALAHA 312
Query: 244 FFTRDH 249
           +F + H
Sbjct: 313 YFAQYH 318

>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma Length = 367

Iteration: 1
 Score = 78.6 bits (192), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 66/246 (26%), Positives = 98/246 (39%), Gaps = 75/246 (30%)
Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           +H   +IH DLKP N+ +                            +   +K++DFG   
Sbjct: 144 IHAAGIIHRDLKPGNLAV---------------------------NEDCELKILDFGLAR 176
Query: 65  YERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLA 123
               +    V TR YRAPEVIL  + +T   DIWSVGCI+ E+ TG+ LF+  ++L+ L 
Sbjct: 177 QADSEMXGXVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLK 236
Query: 124 MMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVPFFYGSF 183
            + +V G  P   ++R+     K   +G                   LP L+   F    
Sbjct: 237 EIMKVTGTPPAEFVQRLQSDEAKNYMKG-------------------LPELEKKDF---- 273
Query: 184 VEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHP 243
                           AS   N        ++    +LL+ +L  D   R+TA EAL HP
Sbjct: 274 ----------------ASILTN--------ASPLAVNLLEKMLVLDAEQRVTAGEALAHP 309
Query: 244 FFTRDH 249
           +F   H
Sbjct: 310 YFESLH 315

>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580 Length = 360

Iteration: 1
 Score = 78.2 bits (191), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 59/246 (23%), Positives = 103/246 (41%), Gaps = 75/246 (30%)
Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           +H   +IH DLKP N+                            + + S +K++DFG   
Sbjct: 141 IHSADIIHRDLKPSNL---------------------------AVNEDSELKILDFGLCR 173
Query: 65  YERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLA 123
           +   +    V+TR YRAPE++L  + +    DIWSVGCI+ EL TG  LF   ++++ L 
Sbjct: 174 HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLK 233
Query: 124 MMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVPFFYGSF 183
           ++ R++G     +LK++                   ++R  I+S+ ++P++         
Sbjct: 234 LILRLVGTPGAELLKKI----------------SSESARNYIQSLTQMPKM--------- 268
Query: 184 VEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHP 243
                +   F   + +A                    LL+ +L  D   R+TA +AL H 
Sbjct: 269 ----NFANVFIGANPLA------------------VDLLEKMLVLDSDKRITAAQALAHA 306
Query: 244 FFTRDH 249
           +F + H
Sbjct: 307 YFAQYH 312

>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl Amide Inhibitor Length = 360

Iteration: 1
 Score = 77.4 bits (189), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 58/246 (23%), Positives = 102/246 (41%), Gaps = 75/246 (30%)
Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           +H   +IH DLKP N+                            + +   +K++DFG   
Sbjct: 141 IHSADIIHRDLKPSNL---------------------------AVNEDXELKILDFGLAR 173
Query: 65  YERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLA 123
           +   +    V+TR YRAPE++L  + +    DIWSVGCI+ EL TG  LF   ++++ L 
Sbjct: 174 HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLK 233
Query: 124 MMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVPFFYGSF 183
           ++ R++G     +LK++                   ++R  I+S+ ++P++         
Sbjct: 234 LILRLVGTPGAELLKKI----------------SSESARNYIQSLTQMPKM--------- 268
Query: 184 VEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHP 243
                +   F   + +A                    LL+ +L  D   R+TA +AL H 
Sbjct: 269 ----NFANVFIGANPLA------------------VDLLEKMLVLDSDKRITAAQALAHA 306
Query: 244 FFTRDH 249
           +F + H
Sbjct: 307 YFAQYH 312

>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine Length = 365

Iteration: 1
 Score = 77.0 bits (188), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 58/246 (23%), Positives = 102/246 (41%), Gaps = 75/246 (30%)
Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           +H   +IH DLKP N+                            + +   +K++DFG   
Sbjct: 146 IHSADIIHRDLKPSNL---------------------------AVNEDXELKILDFGLAR 178
Query: 65  YERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLA 123
           +   +    V+TR YRAPE++L  + +    DIWSVGCI+ EL TG  LF   ++++ L 
Sbjct: 179 HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLK 238
Query: 124 MMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVPFFYGSF 183
           ++ R++G     +LK++                   ++R  I+S+ ++P++         
Sbjct: 239 LILRLVGTPGAELLKKI----------------SSESARNYIQSLTQMPKM--------- 273
Query: 184 VEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHP 243
                +   F   + +A                    LL+ +L  D   R+TA +AL H 
Sbjct: 274 ----NFANVFIGANPLA------------------VDLLEKMLVLDSDKRITAAQALAHA 311
Query: 244 FFTRDH 249
           +F + H
Sbjct: 312 YFAQYH 317

>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl Amide Inhibitor Length = 371

Iteration: 1
 Score = 77.0 bits (188), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 58/246 (23%), Positives = 102/246 (41%), Gaps = 75/246 (30%)
Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           +H   +IH DLKP N+                            + +   +K++DFG   
Sbjct: 152 IHSADIIHRDLKPSNL---------------------------AVNEDXELKILDFGLAR 184
Query: 65  YERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLA 123
           +   +    V+TR YRAPE++L  + +    DIWSVGCI+ EL TG  LF   ++++ L 
Sbjct: 185 HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLK 244
Query: 124 MMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVPFFYGSF 183
           ++ R++G     +LK++                   ++R  I+S+ ++P++         
Sbjct: 245 LILRLVGTPGAELLKKI----------------SSESARNYIQSLTQMPKM--------- 279
Query: 184 VEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHP 243
                +   F   + +A                    LL+ +L  D   R+TA +AL H 
Sbjct: 280 ----NFANVFIGANPLA------------------VDLLEKMLVLDSDKRITAAQALAHA 317
Query: 244 FFTRDH 249
           +F + H
Sbjct: 318 YFAQYH 323

>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195 Length = 365

Iteration: 1
 Score = 77.0 bits (188), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 58/246 (23%), Positives = 102/246 (41%), Gaps = 75/246 (30%)
Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           +H   +IH DLKP N+                            + +   +K++DFG   
Sbjct: 146 IHSADIIHRDLKPSNL---------------------------AVNEDXELKILDFGLAR 178
Query: 65  YERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLA 123
           +   +    V+TR YRAPE++L  + +    DIWSVGCI+ EL TG  LF   ++++ L 
Sbjct: 179 HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLK 238
Query: 124 MMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVPFFYGSF 183
           ++ R++G     +LK++                   ++R  I+S+ ++P++         
Sbjct: 239 LILRLVGTPGAELLKKI----------------SSESARNYIQSLTQMPKM--------- 273
Query: 184 VEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHP 243
                +   F   + +A                    LL+ +L  D   R+TA +AL H 
Sbjct: 274 ----NFANVFIGANPLA------------------VDLLEKMLVLDSDKRITAAQALAHA 311
Query: 244 FFTRDH 249
           +F + H
Sbjct: 312 YFAQYH 317

>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex With Dp802 Length = 354

Iteration: 1
 Score = 76.6 bits (187), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 58/246 (23%), Positives = 102/246 (41%), Gaps = 75/246 (30%)
Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           +H   +IH DLKP N+                            + +   +K++DFG   
Sbjct: 141 IHSADIIHRDLKPSNL---------------------------AVNEDCELKILDFGLAR 173
Query: 65  YERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLA 123
           +   +    V+TR YRAPE++L  + +    DIWSVGCI+ EL TG  LF   ++++ L 
Sbjct: 174 HTDDEMTGXVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLK 233
Query: 124 MMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVPFFYGSF 183
           ++ R++G     +LK++                   ++R  I+S+ ++P++         
Sbjct: 234 LILRLVGTPGAELLKKI----------------SSESARNYIQSLTQMPKM--------- 268
Query: 184 VEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHP 243
                +   F   + +A                    LL+ +L  D   R+TA +AL H 
Sbjct: 269 ----NFANVFIGANPLA------------------VDLLEKMLVLDSDKRITAAQALAHA 306
Query: 244 FFTRDH 249
           +F + H
Sbjct: 307 YFAQYH 312

>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase Length = 360

Iteration: 1
 Score = 76.6 bits (187), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 58/246 (23%), Positives = 102/246 (41%), Gaps = 75/246 (30%)
Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           +H   +IH DLKP N+                            + +   +K++DFG   
Sbjct: 141 IHSADIIHRDLKPSNL---------------------------AVNEDCELKILDFGLAR 173
Query: 65  YERPDQNYIVSTRHYRAPEVIL-GLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLA 123
           +   +    V+TR YRAPE++L  + +    DIWSVGCI+ EL TG  LF   ++++ L 
Sbjct: 174 HTDDEMTGYVATRWYRAPEIMLNAMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLK 233
Query: 124 MMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVPFFYGSF 183
           ++ R++G     +LK++                   ++R  I+S+ ++P++         
Sbjct: 234 LILRLVGTPGAELLKKI----------------SSESARNYIQSLTQMPKM--------- 268
Query: 184 VEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHP 243
                +   F   + +A                    LL+ +L  D   R+TA +AL H 
Sbjct: 269 ----NFANVFIGANPLA------------------VDLLEKMLVLDSDKRITAAQALAHA 306
Query: 244 FFTRDH 249
           +F + H
Sbjct: 307 YFAQYH 312

>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s) Activating Mutant Form-A Length = 367

Iteration: 1
 Score = 76.6 bits (187), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 58/246 (23%), Positives = 102/246 (41%), Gaps = 75/246 (30%)
Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           +H   +IH DLKP N+                            + +   +K++DFG   
Sbjct: 148 IHSADIIHRDLKPSNL---------------------------AVNEDCELKILDFGLAR 180
Query: 65  YERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLA 123
           +   +    V+TR YRAPE++L  + +    DIWSVGCI+ EL TG  LF   ++++ L 
Sbjct: 181 HTADEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLK 240
Query: 124 MMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVPFFYGSF 183
           ++ R++G     +LK++                   ++R  I+S+ ++P++         
Sbjct: 241 LILRLVGTPGAELLKKI----------------SSESARNYIQSLTQMPKM--------- 275
Query: 184 VEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHP 243
                +   F   + +A                    LL+ +L  D   R+TA +AL H 
Sbjct: 276 ----NFANVFIGANPLA------------------VDLLEKMLVLDSDKRITAAQALAHA 313
Query: 244 FFTRDH 249
           +F + H
Sbjct: 314 YFAQYH 319

>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl Amide Inhibitor Length = 360

Iteration: 1
 Score = 76.6 bits (187), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 58/246 (23%), Positives = 102/246 (41%), Gaps = 75/246 (30%)
Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           +H   +IH DLKP N+                            + +   +K++DFG   
Sbjct: 141 IHSADIIHRDLKPSNL---------------------------AVNEDCELKILDFGLAR 173
Query: 65  YERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLA 123
           +   +    V+TR YRAPE++L  + +    DIWSVGCI+ EL TG  LF   ++++ L 
Sbjct: 174 HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLK 233
Query: 124 MMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVPFFYGSF 183
           ++ R++G     +LK++                   ++R  I+S+ ++P++         
Sbjct: 234 LILRLVGTPGAELLKKI----------------SSESARNYIQSLTQMPKM--------- 268
Query: 184 VEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHP 243
                +   F   + +A                    LL+ +L  D   R+TA +AL H 
Sbjct: 269 ----NFANVFIGANPLA------------------VDLLEKMLVLDSDKRITAAQALAHA 306
Query: 244 FFTRDH 249
           +F + H
Sbjct: 307 YFAQYH 312

>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain In Complex With A Monocyclic Pyrazolone Inhibitor Length = 360

Iteration: 1
 Score = 76.6 bits (187), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 58/246 (23%), Positives = 102/246 (41%), Gaps = 75/246 (30%)
Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           +H   +IH DLKP N+                            + +   +K++DFG   
Sbjct: 141 IHSADIIHRDLKPSNL---------------------------AVNEDCELKILDFGLAR 173
Query: 65  YERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLA 123
           +   +    V+TR YRAPE++L  + +    DIWSVGCI+ EL TG  LF   ++++ L 
Sbjct: 174 HTDDEMAGFVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLK 233
Query: 124 MMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVPFFYGSF 183
           ++ R++G     +LK++                   ++R  I+S+ ++P++         
Sbjct: 234 LILRLVGTPGAELLKKI----------------SSESARNYIQSLTQMPKM--------- 268
Query: 184 VEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHP 243
                +   F   + +A                    LL+ +L  D   R+TA +AL H 
Sbjct: 269 ----NFANVFIGANPLA------------------VDLLEKMLVLDSDKRITAAQALAHA 306
Query: 244 FFTRDH 249
           +F + H
Sbjct: 307 YFAQYH 312

>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Pyrrole-2- Carboxamide Inhibitor Length = 371

Iteration: 1
 Score = 76.6 bits (187), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 58/246 (23%), Positives = 102/246 (41%), Gaps = 75/246 (30%)
Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           +H   +IH DLKP N+                            + +   +K++DFG   
Sbjct: 152 IHSADIIHRDLKPSNL---------------------------AVNEDCELKILDFGLAR 184
Query: 65  YERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLA 123
           +   +    V+TR YRAPE++L  + +    DIWSVGCI+ EL TG  LF   ++++ L 
Sbjct: 185 HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLK 244
Query: 124 MMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVPFFYGSF 183
           ++ R++G     +LK++                   ++R  I+S+ ++P++         
Sbjct: 245 LILRLVGTPGAELLKKI----------------SSESARNYIQSLTQMPKM--------- 279
Query: 184 VEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHP 243
                +   F   + +A                    LL+ +L  D   R+TA +AL H 
Sbjct: 280 ----NFANVFIGANPLA------------------VDLLEKMLVLDSDKRITAAQALAHA 317
Query: 244 FFTRDH 249
           +F + H
Sbjct: 318 YFAQYH 323

>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a) Activating Mutant Length = 367

Iteration: 1
 Score = 76.6 bits (187), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 58/246 (23%), Positives = 102/246 (41%), Gaps = 75/246 (30%)
Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           +H   +IH DLKP N+                            + +   +K++DFG   
Sbjct: 148 IHSADIIHRDLKPSNL---------------------------AVNEDCELKILDFGLAR 180
Query: 65  YERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLA 123
           +   +    V+TR YRAPE++L  + +    DIWSVGCI+ EL TG  LF   ++++ L 
Sbjct: 181 HTADEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLK 240
Query: 124 MMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVPFFYGSF 183
           ++ R++G     +LK++                   ++R  I+S+ ++P++         
Sbjct: 241 LILRLVGTPGAELLKKI----------------SSESARNYIQSLTQMPKM--------- 275
Query: 184 VEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHP 243
                +   F   + +A                    LL+ +L  D   R+TA +AL H 
Sbjct: 276 ----NFANVFIGANPLA------------------VDLLEKMLVLDSDKRITAAQALAHA 313
Query: 244 FFTRDH 249
           +F + H
Sbjct: 314 YFAQYH 319

>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A Dihydroquinazolinone Inhibitor Length = 366

Iteration: 1
 Score = 76.6 bits (187), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 58/246 (23%), Positives = 102/246 (41%), Gaps = 75/246 (30%)
Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           +H   +IH DLKP N+                            + +   +K++DFG   
Sbjct: 147 IHSADIIHRDLKPSNL---------------------------AVNEDCELKILDFGLAR 179
Query: 65  YERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLA 123
           +   +    V+TR YRAPE++L  + +    DIWSVGCI+ EL TG  LF   ++++ L 
Sbjct: 180 HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLK 239
Query: 124 MMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVPFFYGSF 183
           ++ R++G     +LK++                   ++R  I+S+ ++P++         
Sbjct: 240 LILRLVGTPGAELLKKI----------------SSESARNYIQSLTQMPKM--------- 274
Query: 184 VEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHP 243
                +   F   + +A                    LL+ +L  D   R+TA +AL H 
Sbjct: 275 ----NFANVFIGANPLA------------------VDLLEKMLVLDSDKRITAAQALAHA 312
Query: 244 FFTRDH 249
           +F + H
Sbjct: 313 YFAQYH 318

>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499 Length = 372

Iteration: 1
 Score = 76.6 bits (187), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 58/246 (23%), Positives = 102/246 (41%), Gaps = 75/246 (30%)
Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           +H   +IH DLKP N+                            + +   +K++DFG   
Sbjct: 153 IHSADIIHRDLKPSNL---------------------------AVNEDCELKILDFGLAR 185
Query: 65  YERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLA 123
           +   +    V+TR YRAPE++L  + +    DIWSVGCI+ EL TG  LF   ++++ L 
Sbjct: 186 HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLK 245
Query: 124 MMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVPFFYGSF 183
           ++ R++G     +LK++                   ++R  I+S+ ++P++         
Sbjct: 246 LILRLVGTPGAELLKKI----------------SSESARNYIQSLTQMPKM--------- 280
Query: 184 VEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHP 243
                +   F   + +A                    LL+ +L  D   R+TA +AL H 
Sbjct: 281 ----NFANVFIGANPLA------------------VDLLEKMLVLDSDKRITAAQALAHA 318
Query: 244 FFTRDH 249
           +F + H
Sbjct: 319 YFAQYH 324

>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole Inhibitor Length = 372

Iteration: 1
 Score = 76.6 bits (187), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 58/246 (23%), Positives = 102/246 (41%), Gaps = 75/246 (30%)
Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           +H   +IH DLKP N+                            + +   +K++DFG   
Sbjct: 153 IHSADIIHRDLKPSNL---------------------------AVNEDCELKILDFGLAR 185
Query: 65  YERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLA 123
           +   +    V+TR YRAPE++L  + +    DIWSVGCI+ EL TG  LF   ++++ L 
Sbjct: 186 HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLK 245
Query: 124 MMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVPFFYGSF 183
           ++ R++G     +LK++                   ++R  I+S+ ++P++         
Sbjct: 246 LILRLVGTPGAELLKKI----------------SSESARNYIQSLTQMPKM--------- 280
Query: 184 VEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHP 243
                +   F   + +A                    LL+ +L  D   R+TA +AL H 
Sbjct: 281 ----NFANVFIGANPLA------------------VDLLEKMLVLDSDKRITAAQALAHA 318
Query: 244 FFTRDH 249
           +F + H
Sbjct: 319 YFAQYH 324

>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195 Length = 372

Iteration: 1
 Score = 76.6 bits (187), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 58/246 (23%), Positives = 102/246 (41%), Gaps = 75/246 (30%)
Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           +H   +IH DLKP N+                            + +   +K++DFG   
Sbjct: 153 IHSADIIHRDLKPSNL---------------------------AVNEDCELKILDFGLAR 185
Query: 65  YERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLA 123
           +   +    V+TR YRAPE++L  + +    DIWSVGCI+ EL TG  LF   ++++ L 
Sbjct: 186 HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLK 245
Query: 124 MMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVPFFYGSF 183
           ++ R++G     +LK++                   ++R  I+S+ ++P++         
Sbjct: 246 LILRLVGTPGAELLKKI----------------SSESARNYIQSLTQMPKM--------- 280
Query: 184 VEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHP 243
                +   F   + +A                    LL+ +L  D   R+TA +AL H 
Sbjct: 281 ----NFANVFIGANPLA------------------VDLLEKMLVLDSDKRITAAQALAHA 318
Query: 244 FFTRDH 249
           +F + H
Sbjct: 319 YFAQYH 324

>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38) Length = 360

Iteration: 1
 Score = 76.6 bits (187), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 58/246 (23%), Positives = 102/246 (41%), Gaps = 75/246 (30%)
Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           +H   +IH DLKP N+                            + +   +K++DFG   
Sbjct: 141 IHSADIIHRDLKPSNL---------------------------AVNEDCELKILDFGLAR 173
Query: 65  YERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLA 123
           +   +    V+TR YRAPE++L  + +    DIWSVGCI+ EL TG  LF   ++++ L 
Sbjct: 174 HTDDEMAGFVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLK 233
Query: 124 MMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVPFFYGSF 183
           ++ R++G     +LK++                   ++R  I+S+ ++P++         
Sbjct: 234 LILRLVGTPGAELLKKI----------------SSESARNYIQSLAQMPKM--------- 268
Query: 184 VEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHP 243
                +   F   + +A                    LL+ +L  D   R+TA +AL H 
Sbjct: 269 ----NFANVFIGANPLA------------------VDLLEKMLVLDSDKRITAAQALAHA 306
Query: 244 FFTRDH 249
           +F + H
Sbjct: 307 YFAQYH 312

>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l) Activating Mutant Length = 367

Iteration: 1
 Score = 76.6 bits (187), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 58/246 (23%), Positives = 102/246 (41%), Gaps = 75/246 (30%)
Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           +H   +IH DLKP N+                            + +   +K++DFG   
Sbjct: 148 IHSADIIHRDLKPSNL---------------------------AVNEDCELKILDFGLAR 180
Query: 65  YERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLA 123
           +   +    V+TR YRAPE++L  + +    DIWSVGCI+ EL TG  LF   ++++ L 
Sbjct: 181 HTADEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLK 240
Query: 124 MMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVPFFYGSF 183
           ++ R++G     +LK++                   ++R  I+S+ ++P++         
Sbjct: 241 LILRLVGTPGAELLKKI----------------SSESARNYIQSLTQMPKM--------- 275
Query: 184 VEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHP 243
                +   F   + +A                    LL+ +L  D   R+TA +AL H 
Sbjct: 276 ----NFANVFIGANPLA------------------VDLLEKMLVLDSDKRITAAQALAHA 313
Query: 244 FFTRDH 249
           +F + H
Sbjct: 314 YFAQYH 319

>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376 Length = 354

Iteration: 1
 Score = 76.6 bits (187), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 58/246 (23%), Positives = 102/246 (41%), Gaps = 75/246 (30%)
Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           +H   +IH DLKP N+                            + +   +K++DFG   
Sbjct: 141 IHSADIIHRDLKPSNL---------------------------AVNEDCELKILDFGLAR 173
Query: 65  YERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLA 123
           +   +    V+TR YRAPE++L  + +    DIWSVGCI+ EL TG  LF   ++++ L 
Sbjct: 174 HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLK 233
Query: 124 MMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVPFFYGSF 183
           ++ R++G     +LK++                   ++R  I+S+ ++P++         
Sbjct: 234 LILRLVGTPGAELLKKI----------------SSESARNYIQSLTQMPKM--------- 268
Query: 184 VEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHP 243
                +   F   + +A                    LL+ +L  D   R+TA +AL H 
Sbjct: 269 ----NFANVFIGANPLA------------------VDLLEKMLVLDSDKRITAAQALAHA 306
Query: 244 FFTRDH 249
           +F + H
Sbjct: 307 YFAQYH 312

>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121 Length = 362

Iteration: 1
 Score = 76.6 bits (187), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 58/246 (23%), Positives = 102/246 (41%), Gaps = 75/246 (30%)
Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           +H   +IH DLKP N+                            + +   +K++DFG   
Sbjct: 143 IHSADIIHRDLKPSNL---------------------------AVNEDCELKILDFGLAR 175
Query: 65  YERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLA 123
           +   +    V+TR YRAPE++L  + +    DIWSVGCI+ EL TG  LF   ++++ L 
Sbjct: 176 HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLK 235
Query: 124 MMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVPFFYGSF 183
           ++ R++G     +LK++                   ++R  I+S+ ++P++         
Sbjct: 236 LILRLVGTPGAELLKKI----------------SSESARNYIQSLTQMPKM--------- 270
Query: 184 VEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHP 243
                +   F   + +A                    LL+ +L  D   R+TA +AL H 
Sbjct: 271 ----NFANVFIGANPLA------------------VDLLEKMLVLDSDKRITAAQALAHA 308
Query: 244 FFTRDH 249
           +F + H
Sbjct: 309 YFAQYH 314

>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The Docking Site On Its Nuclear Substrate Mef2a Length = 360

Iteration: 1
 Score = 76.6 bits (187), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 58/246 (23%), Positives = 102/246 (41%), Gaps = 75/246 (30%)
Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           +H   +IH DLKP N+                            + +   +K++DFG   
Sbjct: 141 IHSADIIHRDLKPSNL---------------------------AVNEDCELKILDFGLAR 173
Query: 65  YERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLA 123
           +   +    V+TR YRAPE++L  + +    DIWSVGCI+ EL TG  LF   ++++ L 
Sbjct: 174 HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLK 233
Query: 124 MMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVPFFYGSF 183
           ++ R++G     +LK++                   ++R  I+S+ ++P++         
Sbjct: 234 LILRLVGTPGAELLKKI----------------SSESARNYIQSLAQMPKM--------- 268
Query: 184 VEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHP 243
                +   F   + +A                    LL+ +L  D   R+TA +AL H 
Sbjct: 269 ----NFANVFIGANPLA------------------VDLLEKMLVLDSDKRITAAQALAHA 306
Query: 244 FFTRDH 249
           +F + H
Sbjct: 307 YFAQYH 312

>pdb|3HEC|A Chain A, P38 In Complex With Imatinib Length = 348

Iteration: 1
 Score = 76.3 bits (186), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 58/246 (23%), Positives = 102/246 (41%), Gaps = 75/246 (30%)
Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           +H   +IH DLKP N+                            + +   +K++DFG   
Sbjct: 137 IHSADIIHRDLKPSNL---------------------------AVNEDCELKILDFGLAR 169
Query: 65  YERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLA 123
           +   +    V+TR YRAPE++L  + +    DIWSVGCI+ EL TG  LF   ++++ L 
Sbjct: 170 HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLK 229
Query: 124 MMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVPFFYGSF 183
           ++ R++G     +LK++                   ++R  I+S+ ++P++         
Sbjct: 230 LILRLVGTPGAELLKKI----------------SSESARNYIQSLTQMPKM--------- 264
Query: 184 VEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHP 243
                +   F   + +A                    LL+ +L  D   R+TA +AL H 
Sbjct: 265 ----NFANVFIGANPLA------------------VDLLEKMLVLDSDKRITAAQALAHA 302
Query: 244 FFTRDH 249
           +F + H
Sbjct: 303 YFAQYH 308

>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48 Length = 360

Iteration: 1
 Score = 76.3 bits (186), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 58/246 (23%), Positives = 102/246 (41%), Gaps = 75/246 (30%)
Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           +H   +IH DLKP N+                            + +   +K++DFG   
Sbjct: 141 IHSADIIHRDLKPSNL---------------------------AVNEDCELKILDFGLAR 173
Query: 65  YERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLA 123
           +   +    V+TR YRAPE++L  + +    DIWSVGCI+ EL TG  LF   ++++ L 
Sbjct: 174 HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLK 233
Query: 124 MMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVPFFYGSF 183
           ++ R++G     +LK++                   ++R  I+S+ ++P++         
Sbjct: 234 LILRLVGTPGAELLKKI----------------SSESARNYIQSLTQMPKM--------- 268
Query: 184 VEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHP 243
                +   F   + +A                    LL+ +L  D   R+TA +AL H 
Sbjct: 269 ----NFANVFIGANPLA------------------VDLLEKMLVLDSDKRITAAQALAHA 306
Query: 244 FFTRDH 249
           +F + H
Sbjct: 307 YFAQYH 312

>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea Length = 365

Iteration: 1
 Score = 76.3 bits (186), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 58/246 (23%), Positives = 102/246 (41%), Gaps = 75/246 (30%)
Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           +H   +IH DLKP N+                            + +   +K++DFG   
Sbjct: 146 IHSADIIHRDLKPSNL---------------------------AVNEDCELKILDFGLAR 178
Query: 65  YERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLA 123
           +   +    V+TR YRAPE++L  + +    DIWSVGCI+ EL TG  LF   ++++ L 
Sbjct: 179 HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLK 238
Query: 124 MMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVPFFYGSF 183
           ++ R++G     +LK++                   ++R  I+S+ ++P++         
Sbjct: 239 LILRLVGTPGAELLKKI----------------SSESARNYIQSLTQMPKM--------- 273
Query: 184 VEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHP 243
                +   F   + +A                    LL+ +L  D   R+TA +AL H 
Sbjct: 274 ----NFANVFIGANPLA------------------VDLLEKMLVLDSDKRITAAQALAHA 311
Query: 244 FFTRDH 249
           +F + H
Sbjct: 312 YFAQYH 317

>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small Molecule Inhibitor Length = 359

Iteration: 1
 Score = 76.3 bits (186), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 58/246 (23%), Positives = 102/246 (41%), Gaps = 75/246 (30%)
Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           +H   +IH DLKP N+                            + +   +K++DFG   
Sbjct: 140 IHSADIIHRDLKPSNL---------------------------AVNEDCELKILDFGLAR 172
Query: 65  YERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLA 123
           +   +    V+TR YRAPE++L  + +    DIWSVGCI+ EL TG  LF   ++++ L 
Sbjct: 173 HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLK 232
Query: 124 MMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVPFFYGSF 183
           ++ R++G     +LK++                   ++R  I+S+ ++P++         
Sbjct: 233 LILRLVGTPGAELLKKI----------------SSESARNYIQSLTQMPKM--------- 267
Query: 184 VEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHP 243
                +   F   + +A                    LL+ +L  D   R+TA +AL H 
Sbjct: 268 ----NFANVFIGANPLA------------------VDLLEKMLVLDSDKRITAAQALAHA 305
Query: 244 FFTRDH 249
           +F + H
Sbjct: 306 YFAQYH 311

>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715 Length = 362

Iteration: 1
 Score = 76.3 bits (186), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 58/246 (23%), Positives = 102/246 (41%), Gaps = 75/246 (30%)
Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           +H   +IH DLKP N+                            + +   +K++DFG   
Sbjct: 143 IHSADIIHRDLKPSNL---------------------------AVNEDCELKILDFGLAR 175
Query: 65  YERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLA 123
           +   +    V+TR YRAPE++L  + +    DIWSVGCI+ EL TG  LF   ++++ L 
Sbjct: 176 HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLK 235
Query: 124 MMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVPFFYGSF 183
           ++ R++G     +LK++                   ++R  I+S+ ++P++         
Sbjct: 236 LILRLVGTPGAELLKKI----------------SSESARNYIQSLTQMPKM--------- 270
Query: 184 VEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHP 243
                +   F   + +A                    LL+ +L  D   R+TA +AL H 
Sbjct: 271 ----NFANVFIGANPLA------------------VDLLEKMLVLDSDKRITAAQALAHA 308
Query: 244 FFTRDH 249
           +F + H
Sbjct: 309 YFAQYH 314

>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small Molecule Inhibitor Length = 349

Iteration: 1
 Score = 76.3 bits (186), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 58/246 (23%), Positives = 102/246 (41%), Gaps = 75/246 (30%)
Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           +H   +IH DLKP N+                            + +   +K++DFG   
Sbjct: 138 IHSADIIHRDLKPSNL---------------------------AVNEDCELKILDFGLAR 170
Query: 65  YERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLA 123
           +   +    V+TR YRAPE++L  + +    DIWSVGCI+ EL TG  LF   ++++ L 
Sbjct: 171 HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLK 230
Query: 124 MMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVPFFYGSF 183
           ++ R++G     +LK++                   ++R  I+S+ ++P++         
Sbjct: 231 LILRLVGTPGAELLKKI----------------SSESARNYIQSLTQMPKM--------- 265
Query: 184 VEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHP 243
                +   F   + +A                    LL+ +L  D   R+TA +AL H 
Sbjct: 266 ----NFANVFIGANPLA------------------VDLLEKMLVLDSDKRITAAQALAHA 303
Query: 244 FFTRDH 249
           +F + H
Sbjct: 304 YFAQYH 309

>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex Length = 366

Iteration: 1
 Score = 76.3 bits (186), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 60/246 (24%), Positives = 104/246 (42%), Gaps = 75/246 (30%)
Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           +H   +IH DLKP N+                            + +   +K++DFG   
Sbjct: 147 IHSADIIHRDLKPSNL---------------------------AVNEDCELKILDFGLAR 179
Query: 65  YERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLA 123
           +   +    V+TR YRAPE++L  + +    DIWSVGCI+ EL TG  LF   ++++ L 
Sbjct: 180 HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLK 239
Query: 124 MMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVPFFYGSF 183
           ++ R++G     +LK++                   ++R  I+S+ ++P++         
Sbjct: 240 LILRLVGTPGAELLKKI----------------SSESARNYIQSLTQMPKM--------- 274
Query: 184 VEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHP 243
                +   F   + +A          VD        LL+ +L  D   R+TA +AL H 
Sbjct: 275 ----NFANVFIGANPLA----------VD--------LLEKMLVLDSDKRITAAQALAHA 312
Query: 244 FFTRDH 249
           +F + H
Sbjct: 313 YFAQYH 318

>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant Length = 360

Iteration: 1
 Score = 76.3 bits (186), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 58/246 (23%), Positives = 102/246 (41%), Gaps = 75/246 (30%)
Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           +H   +IH DLKP N+                            + +   +K++DFG   
Sbjct: 141 IHSADIIHRDLKPSNL---------------------------AVNEDCELKILDFGLAR 173
Query: 65  YERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLA 123
           +   +    V+TR YRAPE++L  + +    DIWSVGCI+ EL TG  LF   ++++ L 
Sbjct: 174 HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLK 233
Query: 124 MMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVPFFYGSF 183
           ++ R++G     +LK++                   ++R  I+S+ ++P++         
Sbjct: 234 LILRLVGTPGAELLKKI----------------SSESARNYIQSLTQMPKM--------- 268
Query: 184 VEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHP 243
                +   F   + +A                    LL+ +L  D   R+TA +AL H 
Sbjct: 269 ----NFANVFIGANPLA------------------VDLLEKMLVLDSDKRITAAQALAHA 306
Query: 244 FFTRDH 249
           +F + H
Sbjct: 307 YFAQYH 312

>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE COMPLEX IN Solution Length = 359

Iteration: 1
 Score = 76.3 bits (186), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 58/246 (23%), Positives = 102/246 (41%), Gaps = 75/246 (30%)
Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           +H   +IH DLKP N+                            + +   +K++DFG   
Sbjct: 146 IHSADIIHRDLKPSNL---------------------------AVNEDCELKILDFGLAR 178
Query: 65  YERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLA 123
           +   +    V+TR YRAPE++L  + +    DIWSVGCI+ EL TG  LF   ++++ L 
Sbjct: 179 HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLK 238
Query: 124 MMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVPFFYGSF 183
           ++ R++G     +LK++                   ++R  I+S+ ++P++         
Sbjct: 239 LILRLVGTPGAELLKKI----------------SSESARNYIQSLTQMPKM--------- 273
Query: 184 VEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHP 243
                +   F   + +A                    LL+ +L  D   R+TA +AL H 
Sbjct: 274 ----NFANVFIGANPLA------------------VDLLEKMLVLDSDKRITAAQALAHA 311
Query: 244 FFTRDH 249
           +F + H
Sbjct: 312 YFAQYH 317

>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In Phosphorylated P38a And In Solution Length = 370

Iteration: 1
 Score = 76.3 bits (186), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 58/246 (23%), Positives = 102/246 (41%), Gaps = 75/246 (30%)
Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           +H   +IH DLKP N+                            + +   +K++DFG   
Sbjct: 151 IHSADIIHRDLKPSNL---------------------------AVNEDCELKILDFGLAR 183
Query: 65  YERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLA 123
           +   +    V+TR YRAPE++L  + +    DIWSVGCI+ EL TG  LF   ++++ L 
Sbjct: 184 HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLK 243
Query: 124 MMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVPFFYGSF 183
           ++ R++G     +LK++                   ++R  I+S+ ++P++         
Sbjct: 244 LILRLVGTPGAELLKKI----------------SSESARNYIQSLAQMPKM--------- 278
Query: 184 VEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHP 243
                +   F   + +A                    LL+ +L  D   R+TA +AL H 
Sbjct: 279 ----NFANVFIGANPLA------------------VDLLEKMLVLDSDKRITAAQALAHA 316
Query: 244 FFTRDH 249
           +F + H
Sbjct: 317 YFAQYH 322

>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine Length = 351

Iteration: 1
 Score = 76.3 bits (186), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 58/246 (23%), Positives = 102/246 (41%), Gaps = 75/246 (30%)
Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           +H   +IH DLKP N+                            + +   +K++DFG   
Sbjct: 138 IHSADIIHRDLKPSNL---------------------------AVNEDCELKILDFGLAR 170
Query: 65  YERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLA 123
           +   +    V+TR YRAPE++L  + +    DIWSVGCI+ EL TG  LF   ++++ L 
Sbjct: 171 HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLK 230
Query: 124 MMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVPFFYGSF 183
           ++ R++G     +LK++                   ++R  I+S+ ++P++         
Sbjct: 231 LILRLVGTPGAELLKKI----------------SSESARNYIQSLTQMPKM--------- 265
Query: 184 VEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHP 243
                +   F   + +A                    LL+ +L  D   R+TA +AL H 
Sbjct: 266 ----NFANVFIGANPLA------------------VDLLEKMLVLDSDKRITAAQALAHA 303
Query: 244 FFTRDH 249
           +F + H
Sbjct: 304 YFAQYH 309

>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map Kinase Length = 360

Iteration: 1
 Score = 76.3 bits (186), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 58/246 (23%), Positives = 102/246 (41%), Gaps = 75/246 (30%)
Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           +H   +IH DLKP N+                            + +   +K++DFG   
Sbjct: 141 IHSADIIHRDLKPSNL---------------------------AVNEDCELKILDFGLAR 173
Query: 65  YERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLA 123
           +   +    V+TR YRAPE++L  + +    DIWSVGCI+ EL TG  LF   ++++ L 
Sbjct: 174 HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLK 233
Query: 124 MMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVPFFYGSF 183
           ++ R++G     +LK++                   ++R  I+S+ ++P++         
Sbjct: 234 LILRLVGTPGAELLKKI----------------SSESARNYIQSLTQMPKM--------- 268
Query: 184 VEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHP 243
                +   F   + +A                    LL+ +L  D   R+TA +AL H 
Sbjct: 269 ----NFANVFIGANPLA------------------VDLLEKMLVLDSDKRITAAQALAHA 306
Query: 244 FFTRDH 249
           +F + H
Sbjct: 307 YFAQYH 312

>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk Docking Partner Length = 380

Iteration: 1
 Score = 76.3 bits (186), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 60/246 (24%), Positives = 104/246 (42%), Gaps = 75/246 (30%)
Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           +H   +IH DLKP N+                            + +   +K++DFG   
Sbjct: 161 IHSADIIHRDLKPSNL---------------------------AVNEDCELKILDFGLAR 193
Query: 65  YERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLA 123
           +   +    V+TR YRAPE++L  + +    DIWSVGCI+ EL TG  LF   ++++ L 
Sbjct: 194 HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLK 253
Query: 124 MMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVPFFYGSF 183
           ++ R++G     +LK++                   ++R  I+S+ ++P++         
Sbjct: 254 LILRLVGTPGAELLKKI----------------SSESARNYIQSLAQMPKM--------- 288
Query: 184 VEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHP 243
                +   F   + +A          VD        LL+ +L  D   R+TA +AL H 
Sbjct: 289 ----NFANVFIGANPLA----------VD--------LLEKMLVLDSDKRITAAQALAHA 326
Query: 244 FFTRDH 249
           +F + H
Sbjct: 327 YFAQYH 332

>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955 Length = 350

Iteration: 1
 Score = 76.3 bits (186), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 58/246 (23%), Positives = 102/246 (41%), Gaps = 75/246 (30%)
Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           +H   +IH DLKP N+                            + +   +K++DFG   
Sbjct: 139 IHSADIIHRDLKPSNL---------------------------AVNEDCELKILDFGLAR 171
Query: 65  YERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLA 123
           +   +    V+TR YRAPE++L  + +    DIWSVGCI+ EL TG  LF   ++++ L 
Sbjct: 172 HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLK 231
Query: 124 MMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVPFFYGSF 183
           ++ R++G     +LK++                   ++R  I+S+ ++P++         
Sbjct: 232 LILRLVGTPGAELLKKI----------------SSESARNYIQSLTQMPKM--------- 266
Query: 184 VEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHP 243
                +   F   + +A                    LL+ +L  D   R+TA +AL H 
Sbjct: 267 ----NFANVFIGANPLA------------------VDLLEKMLVLDSDKRITAAQALAHA 304
Query: 244 FFTRDH 249
           +F + H
Sbjct: 305 YFAQYH 310

>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant Length = 360

Iteration: 1
 Score = 76.3 bits (186), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 58/246 (23%), Positives = 102/246 (41%), Gaps = 75/246 (30%)
Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           +H   +IH DLKP N+                            + +   +K++DFG   
Sbjct: 141 IHSADIIHRDLKPSNL---------------------------AVNEDCELKILDFGLAR 173
Query: 65  YERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLA 123
           +   +    V+TR YRAPE++L  + +    DIWSVGCI+ EL TG  LF   ++++ L 
Sbjct: 174 HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLK 233
Query: 124 MMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVPFFYGSF 183
           ++ R++G     +LK++                   ++R  I+S+ ++P++         
Sbjct: 234 LILRLVGTPGAELLKKI----------------SSESARNYIQSLTQMPKM--------- 268
Query: 184 VEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHP 243
                +   F   + +A                    LL+ +L  D   R+TA +AL H 
Sbjct: 269 ----NFANVFIGANPLA------------------VDLLEKMLVLDSDKRITAAQALAHA 306
Query: 244 FFTRDH 249
           +F + H
Sbjct: 307 YFAQYH 312

>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase Length = 367

Iteration: 1
 Score = 76.3 bits (186), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 58/246 (23%), Positives = 102/246 (41%), Gaps = 75/246 (30%)
Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           +H   +IH DLKP N+                            + +   +K++DFG   
Sbjct: 148 IHSADIIHRDLKPSNL---------------------------AVNEDCELKILDFGLAR 180
Query: 65  YERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLA 123
           +   +    V+TR YRAPE++L  + +    DIWSVGCI+ EL TG  LF   ++++ L 
Sbjct: 181 HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLK 240
Query: 124 MMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVPFFYGSF 183
           ++ R++G     +LK++                   ++R  I+S+ ++P++         
Sbjct: 241 LILRLVGTPGAELLKKI----------------SSESARNYIQSLTQMPKM--------- 275
Query: 184 VEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHP 243
                +   F   + +A                    LL+ +L  D   R+TA +AL H 
Sbjct: 276 ----NFANVFIGANPLA------------------VDLLEKMLVLDSDKRITAAQALAHA 313
Query: 244 FFTRDH 249
           +F + H
Sbjct: 314 YFAQYH 319

>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant Length = 360

Iteration: 1
 Score = 76.3 bits (186), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 58/246 (23%), Positives = 102/246 (41%), Gaps = 75/246 (30%)
Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           +H   +IH DLKP N+                            + +   +K++DFG   
Sbjct: 141 IHSADIIHRDLKPSNL---------------------------AVNEDCELKILDFGLAR 173
Query: 65  YERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLA 123
           +   +    V+TR YRAPE++L  + +    DIWSVGCI+ EL TG  LF   ++++ L 
Sbjct: 174 HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLK 233
Query: 124 MMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVPFFYGSF 183
           ++ R++G     +LK++                   ++R  I+S+ ++P++         
Sbjct: 234 LILRLVGTPGAELLKKI----------------SSESARNYIQSLTQMPKM--------- 268
Query: 184 VEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHP 243
                +   F   + +A                    LL+ +L  D   R+TA +AL H 
Sbjct: 269 ----NFANVFIGANPLA------------------VDLLEKMLVLDSDKRITAAQALAHA 306
Query: 244 FFTRDH 249
           +F + H
Sbjct: 307 YFAQYH 312

>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor Length = 383

Iteration: 1
 Score = 76.3 bits (186), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 58/246 (23%), Positives = 102/246 (41%), Gaps = 75/246 (30%)
Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           +H   +IH DLKP N+                            + +   +K++DFG   
Sbjct: 164 IHSADIIHRDLKPSNL---------------------------AVNEDCELKILDFGLAR 196
Query: 65  YERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLA 123
           +   +    V+TR YRAPE++L  + +    DIWSVGCI+ EL TG  LF   ++++ L 
Sbjct: 197 HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLK 256
Query: 124 MMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVPFFYGSF 183
           ++ R++G     +LK++                   ++R  I+S+ ++P++         
Sbjct: 257 LILRLVGTPGAELLKKI----------------SSESARNYIQSLTQMPKM--------- 291
Query: 184 VEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHP 243
                +   F   + +A                    LL+ +L  D   R+TA +AL H 
Sbjct: 292 ----NFANVFIGANPLA------------------VDLLEKMLVLDSDKRITAAQALAHA 329
Query: 244 FFTRDH 249
           +F + H
Sbjct: 330 YFAQYH 335

>pdb|2OZA|B Chain B, Structure Of P38alpha Complex Length = 366

Iteration: 1
 Score = 76.3 bits (186), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 60/246 (24%), Positives = 104/246 (42%), Gaps = 75/246 (30%)
Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           +H   +IH DLKP N+                            + +   +K++DFG   
Sbjct: 147 IHSADIIHRDLKPSNL---------------------------AVNEDCELKILDFGLAR 179
Query: 65  YERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLA 123
           +   +    V+TR YRAPE++L  + +    DIWSVGCI+ EL TG  LF   ++++ L 
Sbjct: 180 HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLK 239
Query: 124 MMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVPFFYGSF 183
           ++ R++G     +LK++                   ++R  I+S+ ++P++         
Sbjct: 240 LILRLVGTPGAELLKKI----------------SSESARNYIQSLAQMPKM--------- 274
Query: 184 VEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHP 243
                +   F   + +A          VD        LL+ +L  D   R+TA +AL H 
Sbjct: 275 ----NFANVFIGANPLA----------VD--------LLEKMLVLDSDKRITAAQALAHA 312
Query: 244 FFTRDH 249
           +F + H
Sbjct: 313 YFAQYH 318

>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In Complex With 4-[3-Methylsulfanylanilino]-6,7- Dimethoxyquinazoline Length = 360

Iteration: 1
 Score = 76.3 bits (186), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 58/246 (23%), Positives = 102/246 (41%), Gaps = 75/246 (30%)
Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           +H   +IH DLKP N+                            + +   +K++DFG   
Sbjct: 141 IHSADIIHRDLKPSNL---------------------------AVNEDCELKILDFGLAR 173
Query: 65  YERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLA 123
           +   +    V+TR YRAPE++L  + +    DIWSVGCI+ EL TG  LF   ++++ L 
Sbjct: 174 HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLK 233
Query: 124 MMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVPFFYGSF 183
           ++ R++G     +LK++                   ++R  I+S+ ++P++         
Sbjct: 234 LILRLVGTPGAELLKKI----------------SSESARNYIQSLTQMPKM--------- 268
Query: 184 VEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHP 243
                +   F   + +A                    LL+ +L  D   R+TA +AL H 
Sbjct: 269 ----NFANVFIGANPLA------------------VDLLEKMLVLDSDKRITAAQALAHA 306
Query: 244 FFTRDH 249
           +F + H
Sbjct: 307 YFAQYH 312

>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With Inhibitor Pg-874743 Length = 348

Iteration: 1
 Score = 76.3 bits (186), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 58/246 (23%), Positives = 102/246 (41%), Gaps = 75/246 (30%)
Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           +H   +IH DLKP N+                            + +   +K++DFG   
Sbjct: 137 IHSADIIHRDLKPSNL---------------------------AVNEDCELKILDFGLAR 169
Query: 65  YERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLA 123
           +   +    V+TR YRAPE++L  + +    DIWSVGCI+ EL TG  LF   ++++ L 
Sbjct: 170 HTDDEMAGFVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLK 229
Query: 124 MMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVPFFYGSF 183
           ++ R++G     +LK++                   ++R  I+S+ ++P++         
Sbjct: 230 LILRLVGTPGAELLKKI----------------SSESARNYIQSLAQMPKM--------- 264
Query: 184 VEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHP 243
                +   F   + +A                    LL+ +L  D   R+TA +AL H 
Sbjct: 265 ----NFANVFIGANPLA------------------VDLLEKMLVLDSDKRITAAQALAHA 302
Query: 244 FFTRDH 249
           +F + H
Sbjct: 303 YFAQYH 308

>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995 Length = 379

Iteration: 1
 Score = 76.3 bits (186), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 58/246 (23%), Positives = 102/246 (41%), Gaps = 75/246 (30%)
Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           +H   +IH DLKP N+                            + +   +K++DFG   
Sbjct: 160 IHSADIIHRDLKPSNL---------------------------AVNEDCELKILDFGLAR 192
Query: 65  YERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLA 123
           +   +    V+TR YRAPE++L  + +    DIWSVGCI+ EL TG  LF   ++++ L 
Sbjct: 193 HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLK 252
Query: 124 MMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVPFFYGSF 183
           ++ R++G     +LK++                   ++R  I+S+ ++P++         
Sbjct: 253 LILRLVGTPGAELLKKI----------------SSESARNYIQSLTQMPKM--------- 287
Query: 184 VEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHP 243
                +   F   + +A                    LL+ +L  D   R+TA +AL H 
Sbjct: 288 ----NFANVFIGANPLA------------------VDLLEKMLVLDSDKRITAAQALAHA 325
Query: 244 FFTRDH 249
           +F + H
Sbjct: 326 YFAQYH 331

>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655 Length = 379

Iteration: 1
 Score = 76.3 bits (186), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 60/246 (24%), Positives = 104/246 (42%), Gaps = 75/246 (30%)
Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           +H   +IH DLKP N+                            + +   +K++DFG   
Sbjct: 160 IHSADIIHRDLKPSNL---------------------------AVNEDCELKILDFGLAR 192
Query: 65  YERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLA 123
           +   +    V+TR YRAPE++L  + +    DIWSVGCI+ EL TG  LF   ++++ L 
Sbjct: 193 HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLK 252
Query: 124 MMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVPFFYGSF 183
           ++ R++G     +LK++                   ++R  I+S+ ++P++         
Sbjct: 253 LILRLVGTPGAELLKKI----------------SSESARNYIQSLAQMPKM--------- 287
Query: 184 VEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHP 243
                +   F   + +A          VD        LL+ +L  D   R+TA +AL H 
Sbjct: 288 ----NFANVFIGANPLA----------VD--------LLEKMLVLDSDKRITAAQALAHA 325
Query: 244 FFTRDH 249
           +F + H
Sbjct: 326 YFAQYH 331

>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1- Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3- Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide Length = 380

Iteration: 1
 Score = 76.3 bits (186), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 58/246 (23%), Positives = 102/246 (41%), Gaps = 75/246 (30%)
Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           +H   +IH DLKP N+                            + +   +K++DFG   
Sbjct: 161 IHSADIIHRDLKPSNL---------------------------AVNEDCELKILDFGLAR 193
Query: 65  YERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLA 123
           +   +    V+TR YRAPE++L  + +    DIWSVGCI+ EL TG  LF   ++++ L 
Sbjct: 194 HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLK 253
Query: 124 MMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVPFFYGSF 183
           ++ R++G     +LK++                   ++R  I+S+ ++P++         
Sbjct: 254 LILRLVGTPGAELLKKI----------------SSESARNYIQSLTQMPKM--------- 288
Query: 184 VEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHP 243
                +   F   + +A                    LL+ +L  D   R+TA +AL H 
Sbjct: 289 ----NFANVFIGANPLA------------------VDLLEKMLVLDSDKRITAAQALAHA 326
Query: 244 FFTRDH 249
           +F + H
Sbjct: 327 YFAQYH 332

>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase Length = 362

Iteration: 1
 Score = 76.3 bits (186), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 58/246 (23%), Positives = 102/246 (41%), Gaps = 75/246 (30%)
Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           +H   +IH DLKP N+                            + +   +K++DFG   
Sbjct: 143 IHSADIIHRDLKPSNL---------------------------AVNEDCELKILDFGLAR 175
Query: 65  YERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLA 123
           +   +    V+TR YRAPE++L  + +    DIWSVGCI+ EL TG  LF   ++++ L 
Sbjct: 176 HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLK 235
Query: 124 MMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVPFFYGSF 183
           ++ R++G     +LK++                   ++R  I+S+ ++P++         
Sbjct: 236 LILRLVGTPGAELLKKI----------------SSESARNYIQSLTQMPKM--------- 270
Query: 184 VEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHP 243
                +   F   + +A                    LL+ +L  D   R+TA +AL H 
Sbjct: 271 ----NFANVFIGANPLA------------------VDLLEKMLVLDSDKRITAAQALAHA 308
Query: 244 FFTRDH 249
           +F + H
Sbjct: 309 YFAQYH 314

>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P- Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl- Pyridin-3-Yl)naphthalen-1-Yl]urea Length = 348

Iteration: 1
 Score = 76.3 bits (186), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 58/246 (23%), Positives = 102/246 (41%), Gaps = 75/246 (30%)
Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           +H   +IH DLKP N+                            + +   +K++DFG   
Sbjct: 137 IHSADIIHRDLKPSNL---------------------------AVNEDCELKILDFGLAR 169
Query: 65  YERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLA 123
           +   +    V+TR YRAPE++L  + +    DIWSVGCI+ EL TG  LF   ++++ L 
Sbjct: 170 HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLK 229
Query: 124 MMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVPFFYGSF 183
           ++ R++G     +LK++                   ++R  I+S+ ++P++         
Sbjct: 230 LILRLVGTPGAELLKKI----------------SSESARNYIQSLAQMPKM--------- 264
Query: 184 VEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHP 243
                +   F   + +A                    LL+ +L  D   R+TA +AL H 
Sbjct: 265 ----NFANVFIGANPLA------------------VDLLEKMLVLDSDKRITAAQALAHA 302
Query: 244 FFTRDH 249
           +F + H
Sbjct: 303 YFAQYH 308

>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With Inhibitor Pg-892579 Length = 348

Iteration: 1
 Score = 76.3 bits (186), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 58/246 (23%), Positives = 102/246 (41%), Gaps = 75/246 (30%)
Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           +H   +IH DLKP N+                            + +   +K++DFG   
Sbjct: 137 IHSADIIHRDLKPSNL---------------------------AVNEDCELKILDFGLAR 169
Query: 65  YERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLA 123
           +   +    V+TR YRAPE++L  + +    DIWSVGCI+ EL TG  LF   ++++ L 
Sbjct: 170 HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLK 229
Query: 124 MMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVPFFYGSF 183
           ++ R++G     +LK++                   ++R  I+S+ ++P++         
Sbjct: 230 LILRLVGTPGAELLKKI----------------SSESARNYIQSLAQMPKM--------- 264
Query: 184 VEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHP 243
                +   F   + +A                    LL+ +L  D   R+TA +AL H 
Sbjct: 265 ----NFANVFIGANPLA------------------VDLLEKMLVLDSDKRITAAQALAHA 302
Query: 244 FFTRDH 249
           +F + H
Sbjct: 303 YFAQYH 308

>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based Inhibitor Length = 383

Iteration: 1
 Score = 76.3 bits (186), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 58/246 (23%), Positives = 102/246 (41%), Gaps = 75/246 (30%)
Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           +H   +IH DLKP N+                            + +   +K++DFG   
Sbjct: 164 IHSADIIHRDLKPSNL---------------------------AVNEDCELKILDFGLAR 196
Query: 65  YERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLA 123
           +   +    V+TR YRAPE++L  + +    DIWSVGCI+ EL TG  LF   ++++ L 
Sbjct: 197 HTDDEMXGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLK 256
Query: 124 MMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVPFFYGSF 183
           ++ R++G     +LK++                   ++R  I+S+ ++P++         
Sbjct: 257 LILRLVGTPGAELLKKI----------------SSESARNYIQSLTQMPKM--------- 291
Query: 184 VEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHP 243
                +   F   + +A                    LL+ +L  D   R+TA +AL H 
Sbjct: 292 ----NFANVFIGANPLA------------------VDLLEKMLVLDSDKRITAAQALAHA 329
Query: 244 FFTRDH 249
           +F + H
Sbjct: 330 YFAQYH 335

>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase Length = 353

Iteration: 1
 Score = 76.3 bits (186), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 66/243 (27%), Positives = 98/243 (40%), Gaps = 77/243 (31%)
Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           +H   ++H DLKP N+                            + +   +K++DFG   
Sbjct: 142 IHSAGVVHRDLKPGNL---------------------------AVNEDCELKILDFGLAR 174
Query: 65  YERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLA 123
           +   +    V TR YRAPEVIL  + +    DIWSVGCI+ E+ TG+ LF+  + L+ L 
Sbjct: 175 HADAEMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLT 234
Query: 124 MMERVLG-PLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVPFFYGS 182
            + +V G P  + + K  D+ A+ Y                 I+S+ + PR         
Sbjct: 235 QILKVTGVPGTEFVQKLNDKAAKSY-----------------IQSLPQTPR--------- 268
Query: 183 FVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRH 242
                              F Q  +       A D   LL+ +L  D   RLTA +AL H
Sbjct: 269 -----------------KDFTQ--LFPRASPQAAD---LLEKMLELDVDKRLTAAQALTH 306
Query: 243 PFF 245
           PFF
Sbjct: 307 PFF 309

>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase Length = 380

Iteration: 1
 Score = 76.3 bits (186), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 58/246 (23%), Positives = 102/246 (41%), Gaps = 75/246 (30%)
Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           +H   +IH DLKP N+                            + +   +K++DFG   
Sbjct: 161 IHSADIIHRDLKPSNL---------------------------AVNEDCELKILDFGLAR 193
Query: 65  YERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLA 123
           +   +    V+TR YRAPE++L  + +    DIWSVGCI+ EL TG  LF   ++++ L 
Sbjct: 194 HTDDEMXGXVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLK 253
Query: 124 MMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVPFFYGSF 183
           ++ R++G     +LK++                   ++R  I+S+ ++P++         
Sbjct: 254 LILRLVGTPGAELLKKI----------------SSESARNYIQSLAQMPKM--------- 288
Query: 184 VEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHP 243
                +   F   + +A                    LL+ +L  D   R+TA +AL H 
Sbjct: 289 ----NFANVFIGANPLA------------------VDLLEKMLVLDSDKRITAAQALAHA 326
Query: 244 FFTRDH 249
           +F + H
Sbjct: 327 YFAQYH 332

>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of Phe169 In Function And Structural Dynamics And Reveals A Novel Dfg-Out State Length = 360

Iteration: 1
 Score = 76.3 bits (186), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 59/246 (23%), Positives = 103/246 (41%), Gaps = 75/246 (30%)
Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           +H   +IH DLKP N+ +     +K+ DY  + HT  + + +                  
Sbjct: 141 IHSADIIHRDLKPSNLAVNEDCELKILDYGLARHTDDEMTGY------------------ 182
Query: 65  YERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLA 123
                    V+TR YRAPE++L  + +    DIWSVGCI+ EL TG  LF   ++++ L 
Sbjct: 183 ---------VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLK 233
Query: 124 MMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVPFFYGSF 183
           ++ R++G     +LK++                   ++R  I+S+ ++P++         
Sbjct: 234 LILRLVGTPGAELLKKI----------------SSESARNYIQSLTQMPKM--------- 268
Query: 184 VEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHP 243
                +   F   + +A                    LL+ +L  D   R+TA +AL H 
Sbjct: 269 ----NFANVFIGANPLA------------------VDLLEKMLVLDSDKRITAAQALAHA 306
Query: 244 FFTRDH 249
           +F + H
Sbjct: 307 YFAQYH 312

>pdb|4EXU|A Chain A, Mapk13, Inactive Form Length = 371

Iteration: 1
 Score = 75.9 bits (185), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 66/243 (27%), Positives = 98/243 (40%), Gaps = 77/243 (31%)
Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           +H   ++H DLKP N+ +                            +   +K++DFG   
Sbjct: 160 IHSAGVVHRDLKPGNLAV---------------------------NEDCELKILDFGLAR 192
Query: 65  YERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLA 123
           +   +    V TR YRAPEVIL  + +    DIWSVGCI+ E+ TG+ LF+  + L+ L 
Sbjct: 193 HADAEMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLT 252
Query: 124 MMERVLG-PLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVPFFYGS 182
            + +V G P  + + K  D+ A+ Y                 I+S+ + PR         
Sbjct: 253 QILKVTGVPGTEFVQKLNDKAAKSY-----------------IQSLPQTPR--------- 286
Query: 183 FVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRH 242
                              F Q  +       A D   LL+ +L  D   RLTA +AL H
Sbjct: 287 -----------------KDFTQ--LFPRASPQAAD---LLEKMLELDVDKRLTAAQALTH 324
Query: 243 PFF 245
           PFF
Sbjct: 325 PFF 327

>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A Dihydroquinazolinone Inhibitor Length = 370

Iteration: 1
 Score = 75.1 bits (183), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 65/247 (26%), Positives = 99/247 (40%), Gaps = 77/247 (31%)
Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           +H   +IH DLKP NV +                            + S ++++DFG   
Sbjct: 147 IHSAGIIHRDLKPSNVAV---------------------------NEDSELRILDFGLAR 179
Query: 65  YERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLA 123
               +    V+TR YRAPE++L  + +    DIWSVGCI+ EL  G+ALF   + ++ L 
Sbjct: 180 QADEEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGKALFPGSDYIDQLK 239
Query: 124 -MMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVPFFYGS 182
            +ME V  P P+ + K    HA  Y                 I+S+  +P+         
Sbjct: 240 RIMEVVGTPSPEVLAKISSEHARTY-----------------IQSLPPMPQ--------- 273
Query: 183 FVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRH 242
               K     FR  + +A                    LL  +L  D   R++A EAL H
Sbjct: 274 ----KDLSSIFRGANPLA------------------IDLLGRMLVLDSDQRVSAAEALAH 311
Query: 243 PFFTRDH 249
            +F++ H
Sbjct: 312 AYFSQYH 318

>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A Dihydroquinazolinone Length = 370

Iteration: 1
 Score = 74.7 bits (182), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 65/247 (26%), Positives = 99/247 (40%), Gaps = 77/247 (31%)
Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           +H   +IH DLKP NV +                            + S ++++DFG   
Sbjct: 147 IHSAGIIHRDLKPSNVAV---------------------------NEDSELRILDFGLAR 179
Query: 65  YERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLA 123
               +    V+TR YRAPE++L  + +    DIWSVGCI+ EL  G+ALF   + ++ L 
Sbjct: 180 QADEEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGKALFPGSDYIDQLK 239
Query: 124 -MMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVPFFYGS 182
            +ME V  P P+ + K    HA  Y                 I+S+  +P+         
Sbjct: 240 RIMEVVGTPSPEVLAKISSEHARTY-----------------IQSLPPMPQ--------- 273
Query: 183 FVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRH 242
               K     FR  + +A                    LL  +L  D   R++A EAL H
Sbjct: 274 ----KDLSSIFRGANPLA------------------IDLLGRMLVLDSDQRVSAAEALAH 311
Query: 243 PFFTRDH 249
            +F++ H
Sbjct: 312 AYFSQYH 318

>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map Kinase Jnk1 Length = 370

Iteration: 1
 Score = 74.7 bits (182), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 65/243 (26%), Positives = 101/243 (41%), Gaps = 63/243 (25%)
Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           +H   +IH DLKP N+++ S   +K+ D+              R   +S      F  T 
Sbjct: 142 LHSAGIIHRDLKPSNIVVKSDATLKILDFG-----------LARTAGTS------FMMTP 184
Query: 65  YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHL-A 123
           Y        V TR+YRAPEVILG+G+    DIWSVGCI+ E+  G  LF   ++++    
Sbjct: 185 Y--------VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNK 236
Query: 124 MMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVPFFYGSF 183
           ++E++  P P+ M K++      YV                       P+          
Sbjct: 237 VIEQLGTPSPEFM-KKLQPTVRTYVENR--------------------PK---------- 265
Query: 184 VEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHP 243
             + GY       D +  F  +   +H    A     LL  +L  D + R++  EAL+HP
Sbjct: 266 --YAGYSFEKLFPDVL--FPAD--SEHNKLKASQARDLLSKMLVIDASKRISVDEALQHP 319
Query: 244 FFT 246
           +  
Sbjct: 320 YIN 322

>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In Complex With P38 Map Kinase Length = 360

Iteration: 1
 Score = 74.3 bits (181), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 58/246 (23%), Positives = 103/246 (41%), Gaps = 75/246 (30%)
Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           +H   +IH DLKP N+ +     +K+ D+  + HT  + + +                  
Sbjct: 141 IHSADIIHRDLKPSNLAVNEDCELKILDFYLARHTDDEMTGY------------------ 182
Query: 65  YERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLA 123
                    V+TR YRAPE++L  + +    DIWSVGCI+ EL TG  LF   ++++ L 
Sbjct: 183 ---------VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLK 233
Query: 124 MMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVPFFYGSF 183
           ++ R++G     +LK++                   ++R  I+S+ ++P++         
Sbjct: 234 LILRLVGTPGAELLKKI----------------SSESARNYIQSLTQMPKM--------- 268
Query: 184 VEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHP 243
                +   F   + +A                    LL+ +L  D   R+TA +AL H 
Sbjct: 269 ----NFANVFIGANPLA------------------VDLLEKMLVLDSDKRITAAQALAHA 306
Query: 244 FFTRDH 249
           +F + H
Sbjct: 307 YFAQYH 312

>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map Kinase Jnk1 Length = 370

Iteration: 1
 Score = 74.3 bits (181), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 65/243 (26%), Positives = 101/243 (41%), Gaps = 63/243 (25%)
Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           +H   +IH DLKP N+++ S   +K+ D+              R   +S      F  T 
Sbjct: 142 LHSAGIIHRDLKPSNIVVKSDATLKILDFG-----------LARTAGTS------FMMTP 184
Query: 65  YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHL-A 123
           Y        V TR+YRAPEVILG+G+    DIWSVGCI+ E+  G  LF   ++++    
Sbjct: 185 Y--------VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNK 236
Query: 124 MMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVPFFYGSF 183
           ++E++  P P+ M K++      YV                       P+          
Sbjct: 237 VIEQLGTPSPEFM-KKLQPTVRTYVENR--------------------PK---------- 265
Query: 184 VEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHP 243
             + GY       D +  F  +   +H    A     LL  +L  D + R++  EAL+HP
Sbjct: 266 --YAGYSFEKLFPDVL--FPAD--SEHNKLKASQARDLLSKMLVIDASKRISVDEALQHP 319
Query: 244 FFT 246
           +  
Sbjct: 320 YIN 322

>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2 Length = 360

Iteration: 1
 Score = 74.3 bits (181), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 69/242 (28%), Positives = 103/242 (42%), Gaps = 61/242 (25%)
Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           +H   +IH DLKP N+++ S   +K+ D+               + ++++    +F  T 
Sbjct: 140 LHSAGIIHRDLKPSNIVVKSDCTLKILDFG--------------LARTAST---NFMMTP 182
Query: 65  YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAM 124
           Y        V TR+YRAPEVILG+G+    DIWSVGCI+ EL  G  +FQ  ++++    
Sbjct: 183 Y--------VVTRYYRAPEVILGMGYKENVDIWSVGCIMGELVKGSVIFQGTDHIDQWNK 234
Query: 125 MERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVPFFYGSFV 184
           +   LG      +  +      YV   R  +P G A  E          L   + + S  
Sbjct: 235 VIEQLGTPSAEFMAALQPTVRNYV-ENRPAYP-GIAFEE----------LFPDWIFPSES 282
Query: 185 EFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPF 244
           E           D I +             A D   LL  +L  DP  R++  EALRHP+
Sbjct: 283 E----------RDKIKT-----------SQARD---LLSKMLVIDPDKRISVDEALRHPY 318
Query: 245 FT 246
            T
Sbjct: 319 IT 320

>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map Kinase Jnk1 Length = 370

Iteration: 1
 Score = 73.9 bits (180), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 65/243 (26%), Positives = 101/243 (41%), Gaps = 63/243 (25%)
Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           +H   +IH DLKP N+++ S   +K+ D+              R   +S      F  T 
Sbjct: 142 LHSAGIIHRDLKPSNIVVKSDATLKILDFG-----------LARTAGTS------FMMTP 184
Query: 65  YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHL-A 123
           Y        V TR+YRAPEVILG+G+    DIWSVGCI+ E+  G  LF   ++++    
Sbjct: 185 Y--------VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNK 236
Query: 124 MMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVPFFYGSF 183
           ++E++  P P+ M K++      YV                       P+          
Sbjct: 237 VIEQLGTPSPEFM-KKLQPTVRTYVENR--------------------PK---------- 265
Query: 184 VEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHP 243
             + GY       D +  F  +   +H    A     LL  +L  D + R++  EAL+HP
Sbjct: 266 --YAGYSFEKLFPDVL--FPAD--SEHNKLKASQARDLLSKMLVIDASKRISVDEALQHP 319
Query: 244 FFT 246
           +  
Sbjct: 320 YIN 322

>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif Mutants In Response To Inhibitor Binding Length = 360

Iteration: 1
 Score = 73.6 bits (179), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 57/246 (23%), Positives = 101/246 (41%), Gaps = 75/246 (30%)
Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           +H   +IH DLKP N+                            + +   +K++ FG   
Sbjct: 141 IHSADIIHRDLKPSNL---------------------------AVNEDCELKILGFGLAR 173
Query: 65  YERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLA 123
           +   +    V+TR YRAPE++L  + +    DIWSVGCI+ EL TG  LF   ++++ L 
Sbjct: 174 HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLK 233
Query: 124 MMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVPFFYGSF 183
           ++ R++G     +LK++                   ++R  I+S+ ++P++         
Sbjct: 234 LILRLVGTPGAELLKKI----------------SSESARNYIQSLTQMPKM--------- 268
Query: 184 VEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHP 243
                +   F   + +A                    LL+ +L  D   R+TA +AL H 
Sbjct: 269 ----NFANVFIGANPLA------------------VDLLEKMLVLDSDKRITAAQALAHA 306
Query: 244 FFTRDH 249
           +F + H
Sbjct: 307 YFAQYH 312

>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of Phe169 In Function And Structural Dynamics And Reveals A Novel Dfg-Out State Length = 360

Iteration: 1
 Score = 73.2 bits (178), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 57/246 (23%), Positives = 101/246 (41%), Gaps = 75/246 (30%)
Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           +H   +IH DLKP N+                            + +   +K++D G   
Sbjct: 141 IHSADIIHRDLKPSNL---------------------------AVNEDCELKILDAGLAR 173
Query: 65  YERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLA 123
           +   +    V+TR YRAPE++L  + +    DIWSVGCI+ EL TG  LF   ++++ L 
Sbjct: 174 HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLK 233
Query: 124 MMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVPFFYGSF 183
           ++ R++G     +LK++                   ++R  I+S+ ++P++         
Sbjct: 234 LILRLVGTPGAELLKKI----------------SSESARNYIQSLTQMPKM--------- 268
Query: 184 VEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHP 243
                +   F   + +A                    LL+ +L  D   R+TA +AL H 
Sbjct: 269 ----NFANVFIGANPLA------------------VDLLEKMLVLDSDKRITAAQALAHA 306
Query: 244 FFTRDH 249
           +F + H
Sbjct: 307 YFAQYH 312

>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796 Length = 364

Iteration: 1
 Score = 73.2 bits (178), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 67/242 (27%), Positives = 98/242 (40%), Gaps = 61/242 (25%)
Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           +H   +IH DLKP N+++ S   +K+ D+  +                      +F  T 
Sbjct: 142 LHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA-----------------RTACTNFMMTP 184
Query: 65  YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAM 124
           Y        V TR+YRAPEVILG+G+    DIWSVGCI+ EL  G  +FQ  ++++    
Sbjct: 185 Y--------VVTRYYRAPEVILGMGYAANVDIWSVGCIMGELVKGCVIFQGTDHIDQWNK 236
Query: 125 MERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVPFFYGSFV 184
           +   LG      +  +      YV   R  +P            +K   L   + + S  
Sbjct: 237 VIEQLGTPSAEFMAALQPTVRNYV-ENRPKYPG-----------IKFEELFPDWIFPSES 284
Query: 185 EFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPF 244
           E           D I +             A D   LL  +L  DP  R++  EALRHP+
Sbjct: 285 E----------RDKIKT-----------SQARD---LLSKMLVIDPDKRISVDEALRHPY 320
Query: 245 FT 246
            T
Sbjct: 321 IT 322

>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of Phe169 In Function And Structural Dynamics And Reveals A Novel Dfg-Out State Length = 360

Iteration: 1
 Score = 72.8 bits (177), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 57/246 (23%), Positives = 101/246 (41%), Gaps = 75/246 (30%)
Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           +H   +IH DLKP N+                            + +   +K++D G   
Sbjct: 141 IHSADIIHRDLKPSNL---------------------------AVNEDCELKILDGGLAR 173
Query: 65  YERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLA 123
           +   +    V+TR YRAPE++L  + +    DIWSVGCI+ EL TG  LF   ++++ L 
Sbjct: 174 HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLK 233
Query: 124 MMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVPFFYGSF 183
           ++ R++G     +LK++                   ++R  I+S+ ++P++         
Sbjct: 234 LILRLVGTPGAELLKKI----------------SSESARNYIQSLTQMPKM--------- 268
Query: 184 VEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHP 243
                +   F   + +A                    LL+ +L  D   R+TA +AL H 
Sbjct: 269 ----NFANVFIGANPLA------------------VDLLEKMLVLDSDKRITAAQALAHA 306
Query: 244 FFTRDH 249
           +F + H
Sbjct: 307 YFAQYH 312

>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of Phe169 In Function And Structural Dynamics And Reveals A Novel Dfg-Out State Length = 360

Iteration: 1
 Score = 72.8 bits (177), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 58/246 (23%), Positives = 102/246 (41%), Gaps = 75/246 (30%)
Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           +H   +IH DLKP N+ +     +K+ D   + HT  + + +                  
Sbjct: 141 IHSADIIHRDLKPSNLAVNEDCELKILDRGLARHTDDEMTGY------------------ 182
Query: 65  YERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLA 123
                    V+TR YRAPE++L  + +    DIWSVGCI+ EL TG  LF   ++++ L 
Sbjct: 183 ---------VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLK 233
Query: 124 MMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVPFFYGSF 183
           ++ R++G     +LK++                   ++R  I+S+ ++P++         
Sbjct: 234 LILRLVGTPGAELLKKI----------------SSESARNYIQSLTQMPKM--------- 268
Query: 184 VEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHP 243
                +   F   + +A                    LL+ +L  D   R+TA +AL H 
Sbjct: 269 ----NFANVFIGANPLA------------------VDLLEKMLVLDSDKRITAAQALAHA 306
Query: 244 FFTRDH 249
           +F + H
Sbjct: 307 YFAQYH 312

>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein Kinase 11 (p38 Beta) In Complex With Nilotinib Length = 348

Iteration: 1
 Score = 72.4 bits (176), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 64/247 (25%), Positives = 98/247 (39%), Gaps = 77/247 (31%)
Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           +H   +IH DLKP NV +                            +   ++++DFG   
Sbjct: 139 IHSAGIIHRDLKPSNVAV---------------------------NEDCELRILDFGLAR 171
Query: 65  YERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLA 123
               +    V+TR YRAPE++L  + +    DIWSVGCI+ EL  G+ALF   + ++ L 
Sbjct: 172 QADEEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGKALFPGSDYIDQLK 231
Query: 124 -MMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVPFFYGS 182
            +ME V  P P+ + K    HA  Y                 I+S+  +P+         
Sbjct: 232 RIMEVVGTPSPEVLAKISSEHARTY-----------------IQSLPPMPQ--------- 265
Query: 183 FVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRH 242
               K     FR  + +A                    LL  +L  D   R++A EAL H
Sbjct: 266 ----KDLSSIFRGANPLA------------------IDLLGRMLVLDSDQRVSAAEALAH 303
Query: 243 PFFTRDH 249
            +F++ H
Sbjct: 304 AYFSQYH 310

>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562 Length = 364

Iteration: 1
 Score = 72.0 bits (175), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 65/246 (26%), Positives = 103/246 (41%), Gaps = 69/246 (28%)
Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           +H   +IH DLKP N+++ S   +K+ D+              R   +S      F  T 
Sbjct: 142 LHSAGIIHRDLKPSNIVVKSDXTLKILDFG-----------LARTAGTS------FMMTP 184
Query: 65  YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHL-A 123
           Y        V TR+YRAPEVILG+G+    DIWSVGCI+ E+   + LF   + ++    
Sbjct: 185 Y--------VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNK 236
Query: 124 MMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVPFFYGSF 183
           ++E++  P P+ M K++      YV     + P+ A         +  P+L         
Sbjct: 237 VIEQLGTPCPEFM-KKLQPTVRNYVE----NRPKYAG--------LTFPKL--------- 274
Query: 184 VEFKGYCLAFRCTDCIASFCQNLIMQHVDHS---AGDLTHLLQGLLRYDPTDRLTAREAL 240
                             F  +L     +H+   A     LL  +L  DP  R++  +AL
Sbjct: 275 ------------------FPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDAL 316
Query: 241 RHPFFT 246
           +HP+  
Sbjct: 317 QHPYIN 322

>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map Kinase Jnk1 Length = 370

Iteration: 1
 Score = 72.0 bits (175), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 65/243 (26%), Positives = 101/243 (41%), Gaps = 63/243 (25%)
Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           +H   +IH DLKP N+++ S   +K+ D+              R   +S      F  T 
Sbjct: 142 LHSAGIIHRDLKPSNIVVKSDCTLKILDFG-----------LARTAGTS------FMMTP 184
Query: 65  YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHL-A 123
           Y        V TR+YRAPEVILG+G+    DIWSVGCI+ E+  G  LF   ++++    
Sbjct: 185 Y--------VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNK 236
Query: 124 MMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVPFFYGSF 183
           ++E++  P P+ M K++      YV                       P+          
Sbjct: 237 VIEQLGTPSPEFM-KKLQPTVRTYVENR--------------------PK---------- 265
Query: 184 VEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHP 243
             + GY       D +  F  +   +H    A     LL  +L  D + R++  EAL+HP
Sbjct: 266 --YAGYSFEKLFPDVL--FPAD--SEHNKLKASQARDLLSKMLVIDASKRISVDEALQHP 319
Query: 244 FFT 246
           +  
Sbjct: 320 YIN 322

>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737 Length = 364

Iteration: 1
 Score = 72.0 bits (175), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 65/246 (26%), Positives = 103/246 (41%), Gaps = 69/246 (28%)
Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           +H   +IH DLKP N+++ S   +K+ D+              R   +S      F  T 
Sbjct: 142 LHSAGIIHRDLKPSNIVVKSDXTLKILDFG-----------LARTAGTS------FMMTP 184
Query: 65  YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHL-A 123
           Y        V TR+YRAPEVILG+G+    DIWSVGCI+ E+   + LF   + ++    
Sbjct: 185 Y--------VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNK 236
Query: 124 MMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVPFFYGSF 183
           ++E++  P P+ M K++      YV     + P+ A         +  P+L         
Sbjct: 237 VIEQLGTPCPEFM-KKLQPTVRNYVE----NRPKYAG--------LTFPKL--------- 274
Query: 184 VEFKGYCLAFRCTDCIASFCQNLIMQHVDHS---AGDLTHLLQGLLRYDPTDRLTAREAL 240
                             F  +L     +H+   A     LL  +L  DP  R++  +AL
Sbjct: 275 ------------------FPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDAL 316
Query: 241 RHPFFT 246
           +HP+  
Sbjct: 317 QHPYIN 322

>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map Kinase Jnk1 Length = 370

Iteration: 1
 Score = 72.0 bits (175), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 63/242 (26%), Positives = 96/242 (39%), Gaps = 61/242 (25%)
Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           +H   +IH DLKP N+++ S   +K+ D+              R   +S      F  T 
Sbjct: 142 LHSAGIIHRDLKPSNIVVKSDCTLKILDFG-----------LARTAGTS------FMMTP 184
Query: 65  YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAM 124
           Y        V TR+YRAPEVILG+G+    DIWSVGCI+ E+  G  LF   ++++    
Sbjct: 185 Y--------VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNK 236
Query: 125 MERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVPFFYGSFV 184
           +   LG      +K++      YV                       P+           
Sbjct: 237 VIEQLGTPSPEFMKKLQPTVRTYVENR--------------------PK----------- 265
Query: 185 EFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPF 244
            + GY       D +  F  +   +H    A     LL  +L  D + R++  EAL+HP+
Sbjct: 266 -YAGYSFEKLFPDVL--FPAD--SEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPY 320
Query: 245 FT 246
Sbjct: 321 IN 322

>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774 Length = 355

Iteration: 1
 Score = 72.0 bits (175), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 65/246 (26%), Positives = 103/246 (41%), Gaps = 69/246 (28%)
Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           +H   +IH DLKP N+++ S   +K+ D+              R   +S      F  T 
Sbjct: 142 LHSAGIIHRDLKPSNIVVKSDXTLKILDFG-----------LARTAGTS------FMMTP 184
Query: 65  YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHL-A 123
           Y        V TR+YRAPEVILG+G+    DIWSVGCI+ E+   + LF   + ++    
Sbjct: 185 Y--------VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNK 236
Query: 124 MMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVPFFYGSF 183
           ++E++  P P+ M K++      YV     + P+ A         +  P+L         
Sbjct: 237 VIEQLGTPCPEFM-KKLQPTVRNYVE----NRPKYAG--------LTFPKL--------- 274
Query: 184 VEFKGYCLAFRCTDCIASFCQNLIMQHVDHS---AGDLTHLLQGLLRYDPTDRLTAREAL 240
                             F  +L     +H+   A     LL  +L  DP  R++  +AL
Sbjct: 275 ------------------FPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDAL 316
Query: 241 RHPFFT 246
           +HP+  
Sbjct: 317 QHPYIN 322

>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor, Sr- 3451 Length = 353

Iteration: 1
 Score = 72.0 bits (175), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 65/246 (26%), Positives = 103/246 (41%), Gaps = 69/246 (28%)
Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           +H   +IH DLKP N+++ S   +K+ D+              R   +S      F  T 
Sbjct: 142 LHSAGIIHRDLKPSNIVVKSDXTLKILDFG-----------LARTAGTS------FMMTP 184
Query: 65  YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHL-A 123
           Y        V TR+YRAPEVILG+G+    DIWSVGCI+ E+   + LF   + ++    
Sbjct: 185 Y--------VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNK 236
Query: 124 MMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVPFFYGSF 183
           ++E++  P P+ M K++      YV     + P+ A         +  P+L         
Sbjct: 237 VIEQLGTPCPEFM-KKLQPTVRNYVE----NRPKYAG--------LTFPKL--------- 274
Query: 184 VEFKGYCLAFRCTDCIASFCQNLIMQHVDHS---AGDLTHLLQGLLRYDPTDRLTAREAL 240
                             F  +L     +H+   A     LL  +L  DP  R++  +AL
Sbjct: 275 ------------------FPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDAL 316
Query: 241 RHPFFT 246
           +HP+  
Sbjct: 317 QHPYIN 322

>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline Inhibitor Length = 356

Iteration: 1
 Score = 72.0 bits (175), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 65/246 (26%), Positives = 103/246 (41%), Gaps = 69/246 (28%)
Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           +H   +IH DLKP N+++ S   +K+ D+              R   +S      F  T 
Sbjct: 135 LHSAGIIHRDLKPSNIVVKSDXTLKILDFG-----------LARTAGTS------FMMTP 177
Query: 65  YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHL-A 123
           Y        V TR+YRAPEVILG+G+    DIWSVGCI+ E+   + LF   + ++    
Sbjct: 178 Y--------VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNK 229
Query: 124 MMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVPFFYGSF 183
           ++E++  P P+ M K++      YV     + P+ A         +  P+L         
Sbjct: 230 VIEQLGTPCPEFM-KKLQPTVRNYVE----NRPKYAG--------LTFPKL--------- 267
Query: 184 VEFKGYCLAFRCTDCIASFCQNLIMQHVDHS---AGDLTHLLQGLLRYDPTDRLTAREAL 240
                             F  +L     +H+   A     LL  +L  DP  R++  +AL
Sbjct: 268 ------------------FPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDAL 309
Query: 241 RHPFFT 246
           +HP+  
Sbjct: 310 QHPYIN 315

>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By The Scaffolding Protein Jip1 And Sp600125 Length = 369

Iteration: 1
 Score = 72.0 bits (175), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 65/243 (26%), Positives = 101/243 (41%), Gaps = 63/243 (25%)
Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           +H   +IH DLKP N+++ S   +K+ D+              R   +S      F  T 
Sbjct: 142 LHSAGIIHRDLKPSNIVVKSDCTLKILDFG-----------LARTAGTS------FMMTP 184
Query: 65  YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHL-A 123
           Y        V TR+YRAPEVILG+G+    DIWSVGCI+ E+  G  LF   ++++    
Sbjct: 185 Y--------VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNK 236
Query: 124 MMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVPFFYGSF 183
           ++E++  P P+ M K++      YV                       P+          
Sbjct: 237 VIEQLGTPCPEFM-KKLQPTVRTYVENR--------------------PK---------- 265
Query: 184 VEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHP 243
             + GY       D +  F  +   +H    A     LL  +L  D + R++  EAL+HP
Sbjct: 266 --YAGYSFEKLFPDVL--FPAD--SEHNKLKASQARDLLSKMLVIDASKRISVDEALQHP 319
Query: 244 FFT 246
           +  
Sbjct: 320 YIN 322

>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map Kinase Jnk1 Length = 370

Iteration: 1
 Score = 71.6 bits (174), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 64/243 (26%), Positives = 100/243 (41%), Gaps = 63/243 (25%)
Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           +H   +IH DLKP N+++ S   +K+ D+              R   +S      F  T 
Sbjct: 142 LHSAGIIHRDLKPSNIVVKSDATLKILDFG-----------LARTAGTS------FMMTP 184
Query: 65  YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHL-A 123
           Y        V TR+YRAPEVILG+G+    DIWSVG I+ E+  G  LF   ++++    
Sbjct: 185 Y--------VVTRYYRAPEVILGMGYKENVDIWSVGVIMGEMIKGGVLFPGTDHIDQWNK 236
Query: 124 MMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVPFFYGSF 183
           ++E++  P P+ M K++      YV                       P+          
Sbjct: 237 VIEQLGTPSPEFM-KKLQPTVRTYVENR--------------------PK---------- 265
Query: 184 VEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHP 243
             + GY       D +  F  +   +H    A     LL  +L  D + R++  EAL+HP
Sbjct: 266 --YAGYSFEKLFPDVL--FPAD--SEHNKLKASQARDLLSKMLVIDASKRISVDEALQHP 319
Query: 244 FFT 246
           +  
Sbjct: 320 YIN 322

>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin Antagonistically Control The Nuclear Shuttling Of Nfat4 Length = 371

Iteration: 1
 Score = 71.6 bits (174), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 65/243 (26%), Positives = 101/243 (41%), Gaps = 63/243 (25%)
Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           +H   +IH DLKP N+++ S   +K+ D+              R   +S      F  T 
Sbjct: 143 LHSAGIIHRDLKPSNIVVKSDCTLKILDFG-----------LARTAGTS------FMMTP 185
Query: 65  YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHL-A 123
           Y        V TR+YRAPEVILG+G+    DIWSVGCI+ E+  G  LF   ++++    
Sbjct: 186 Y--------VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNK 237
Query: 124 MMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVPFFYGSF 183
           ++E++  P P+ M K++      YV                       P+          
Sbjct: 238 VIEQLGTPCPEFM-KKLQPTVRTYVENR--------------------PK---------- 266
Query: 184 VEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHP 243
             + GY       D +  F  +   +H    A     LL  +L  D + R++  EAL+HP
Sbjct: 267 --YAGYSFEKLFPDVL--FPAD--SEHNKLKASQARDLLSKMLVIDASKRISVDEALQHP 320
Query: 244 FFT 246
           +  
Sbjct: 321 YIN 323

>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map Kinase Jnk1 Length = 370

Iteration: 1
 Score = 71.6 bits (174), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 64/243 (26%), Positives = 100/243 (41%), Gaps = 63/243 (25%)
Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           +H   +IH DLKP N+++ S   +K+ D+              R   +S      F  T 
Sbjct: 142 LHSAGIIHRDLKPSNIVVKSDATLKILDFG-----------LARTAGTS------FMMTP 184
Query: 65  YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHL-A 123
           Y        V TR+YRAPEVILG+G+    DIWSVG I+ E+  G  LF   ++++    
Sbjct: 185 Y--------VVTRYYRAPEVILGMGYKENVDIWSVGVIMGEMIKGGVLFPGTDHIDQWNK 236
Query: 124 MMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVPFFYGSF 183
           ++E++  P P+ M K++      YV                       P+          
Sbjct: 237 VIEQLGTPSPEFM-KKLQPTVRTYVENR--------------------PK---------- 265
Query: 184 VEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHP 243
             + GY       D +  F  +   +H    A     LL  +L  D + R++  EAL+HP
Sbjct: 266 --YAGYSFEKLFPDVL--FPAD--SEHNKLKASQARDLLSKMLVIDASKRISVDEALQHP 319
Query: 244 FFT 246
           +  
Sbjct: 320 YIN 322

>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The Phosphate-responsive Signal Transduction Pathway Length = 317

Iteration: 1
 Score = 71.6 bits (174), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 67/245 (27%), Positives = 104/245 (42%), Gaps = 69/245 (28%)
Query: 2   FAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG 61
            A  H+  ++H DLKP+N+L+     +K+ D+               + ++  I V  F 
Sbjct: 121 LAFCHENKILHRDLKPQNLLINKRGQLKLGDFG--------------LARAFGIPVNTFS 166
Query: 62  STTYERPDQNYIVSTRHYRAPEVILGL-GWTYPCDIWSVGCILVELCTGEALFQTHENLE 120
           S           V T  YRAP+V++G   ++   DIWS GCIL E+ TG+ LF    + E
Sbjct: 167 SE----------VVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEE 216
Query: 121 HLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVPFFY 180
            L ++  ++G  P   L                 WP          SV KLP+      Y
Sbjct: 217 QLKLIFDIMG-TPNESL-----------------WP----------SVTKLPK------Y 242
Query: 181 GSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREAL 240
              ++        R    +    Q    + +D   G+L   L GLL+ +P  RL+A++AL
Sbjct: 243 NPNIQ-------QRPPRDLRQVLQPHTKEPLD---GNLMDFLHGLLQLNPDMRLSAKQAL 292
Query: 241 RHPFF 245
            HP+F
Sbjct: 293 HHPWF 297

>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk Inhibitor For The Prevention Of Ischemia-Reperfusion Injury Length = 464

Iteration: 1
 Score = 70.9 bits (172), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 65/246 (26%), Positives = 103/246 (41%), Gaps = 69/246 (28%)
Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           +H   +IH DLKP N+++ S   +K+ D+              R   +S      F  T 
Sbjct: 180 LHSAGIIHRDLKPSNIVVKSDCTLKILDFG-----------LARTAGTS------FMMTP 222
Query: 65  YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHL-A 123
           Y        V TR+YRAPEVILG+G+    DIWSVGCI+ E+   + LF   + ++    
Sbjct: 223 Y--------VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNK 274
Query: 124 MMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVPFFYGSF 183
           ++E++  P P+ M K++      YV     + P+ A         +  P+L         
Sbjct: 275 VIEQLGTPCPEFM-KKLQPTVRNYVE----NRPKYAG--------LTFPKL--------- 312
Query: 184 VEFKGYCLAFRCTDCIASFCQNLIMQHVDHS---AGDLTHLLQGLLRYDPTDRLTAREAL 240
                             F  +L     +H+   A     LL  +L  DP  R++  +AL
Sbjct: 313 ------------------FPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDAL 354
Query: 241 RHPFFT 246
           +HP+  
Sbjct: 355 QHPYIN 360

>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin Antagonistically Control The Nuclear Shuttling Of Nfat4 Length = 386

Iteration: 1
 Score = 70.9 bits (172), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 61/243 (25%), Positives = 100/243 (41%), Gaps = 63/243 (25%)
Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           +H   +IH DLKP N+++ S   +K+ D+  +       + F  +P              
Sbjct: 144 LHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTA---GTSFMMVP-------------- 186
Query: 65  YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHL-A 123
                    V TR+YRAPEVILG+G+    DIWSVGCI+ E+  G  LF   ++++    
Sbjct: 187 --------FVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNK 238
Query: 124 MMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVPFFYGSF 183
           ++E++  P P+ M K++      YV                                 + 
Sbjct: 239 VIEQLGTPCPEFM-KKLQPTVRTYVE--------------------------------NR 265
Query: 184 VEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHP 243
            ++ GY       D +  F  +   +H    A     LL  +L  D + R++  EAL+HP
Sbjct: 266 PKYAGYSFEKLFPDVL--FPAD--SEHNKLKASQARDLLSKMLVIDASKRISVDEALQHP 321
Query: 244 FFT 246
           +  
Sbjct: 322 YIN 324

>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With Mgamp-Pnp Length = 423

Iteration: 1
 Score = 70.9 bits (172), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 65/246 (26%), Positives = 103/246 (41%), Gaps = 69/246 (28%)
Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           +H   +IH DLKP N+++ S   +K+ D+              R   +S      F  T 
Sbjct: 180 LHSAGIIHRDLKPSNIVVKSDCTLKILDFG-----------LARTAGTS------FMMTP 222
Query: 65  YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHL-A 123
           Y        V TR+YRAPEVILG+G+    DIWSVGCI+ E+   + LF   + ++    
Sbjct: 223 Y--------VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNK 274
Query: 124 MMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVPFFYGSF 183
           ++E++  P P+ M K++      YV     + P+ A         +  P+L         
Sbjct: 275 VIEQLGTPCPEFM-KKLQPTVRNYVE----NRPKYAG--------LTFPKL--------- 312
Query: 184 VEFKGYCLAFRCTDCIASFCQNLIMQHVDHS---AGDLTHLLQGLLRYDPTDRLTAREAL 240
                             F  +L     +H+   A     LL  +L  DP  R++  +AL
Sbjct: 313 ------------------FPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDAL 354
Query: 241 RHPFFT 246
           +HP+  
Sbjct: 355 QHPYIN 360

>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole- Pyrimidine Inhibitor Length = 364

Iteration: 1
 Score = 70.5 bits (171), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 65/243 (26%), Positives = 101/243 (41%), Gaps = 63/243 (25%)
Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           +H   +IH DLKP N+++ S   +K+ D+              R   +S      F  T 
Sbjct: 143 LHSAGIIHRDLKPSNIVVKSDCTLKILDFG-----------LARTAGTS------FMMTP 185
Query: 65  YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHL-A 123
           Y        V TR+YRAPEVILG+G+    DIWSVGCI+ E+   + LF   + ++    
Sbjct: 186 Y--------VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNK 237
Query: 124 MMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVPFFYGSF 183
           ++E++  P P+ M K++      YV     + P+ A         +  P+L    F  S 
Sbjct: 238 VIEQLGTPCPEFM-KKLQPTVRNYVE----NRPKYAG--------LTFPKL----FPDSL 280
Query: 184 VEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHP 243
                                    +H    A     LL  +L  DP  R++  +AL+HP
Sbjct: 281 FPADS--------------------EHNKLKASQARDLLSKMLVIDPAKRISVDDALQHP 320
Query: 244 FFT 246
           +  
Sbjct: 321 YIN 323

>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With N-{3-Cyano-6-[3-(1- Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2, 3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide Length = 364

Iteration: 1
 Score = 70.5 bits (171), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 65/246 (26%), Positives = 103/246 (41%), Gaps = 69/246 (28%)
Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           +H   +IH DLKP N+++ S   +K+ D+              R   +S      F  T 
Sbjct: 142 LHSAGIIHRDLKPSNIVVKSDCTLKILDFG-----------LARTAGTS------FMMTP 184
Query: 65  YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHL-A 123
           Y        V TR+YRAPEVILG+G+    DIWSVGCI+ E+   + LF   + ++    
Sbjct: 185 Y--------VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNK 236
Query: 124 MMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVPFFYGSF 183
           ++E++  P P+ M K++      YV     + P+ A         +  P+L         
Sbjct: 237 VIEQLGTPCPEFM-KKLQPTVRNYVE----NRPKYAG--------LTFPKL--------- 274
Query: 184 VEFKGYCLAFRCTDCIASFCQNLIMQHVDHS---AGDLTHLLQGLLRYDPTDRLTAREAL 240
                             F  +L     +H+   A     LL  +L  DP  R++  +AL
Sbjct: 275 ------------------FPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDAL 316
Query: 241 RHPFFT 246
           +HP+  
Sbjct: 317 QHPYIN 322

>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And Thiazole Based Inhibitors Of Jnk For The Treatment Of Neurodegenerative Diseases Length = 362

Iteration: 1
 Score = 70.5 bits (171), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 65/243 (26%), Positives = 101/243 (41%), Gaps = 63/243 (25%)
Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           +H   +IH DLKP N+++ S   +K+ D+              R   +S      F  T 
Sbjct: 141 LHSAGIIHRDLKPSNIVVKSDCTLKILDFG-----------LARTAGTS------FMMTP 183
Query: 65  YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHL-A 123
           Y        V TR+YRAPEVILG+G+    DIWSVGCI+ E+   + LF   + ++    
Sbjct: 184 Y--------VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNK 235
Query: 124 MMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVPFFYGSF 183
           ++E++  P P+ M K++      YV     + P+ A         +  P+L    F  S 
Sbjct: 236 VIEQLGTPCPEFM-KKLQPTVRNYVE----NRPKYAG--------LTFPKL----FPDSL 278
Query: 184 VEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHP 243
                                    +H    A     LL  +L  DP  R++  +AL+HP
Sbjct: 279 FPADS--------------------EHNKLKASQARDLLSKMLVIDPAKRISVDDALQHP 318
Query: 244 FFT 246
           +  
Sbjct: 319 YIN 321

>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3- Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide Length = 365

Iteration: 1
 Score = 70.5 bits (171), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 65/246 (26%), Positives = 103/246 (41%), Gaps = 69/246 (28%)
Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           +H   +IH DLKP N+++ S   +K+ D+              R   +S      F  T 
Sbjct: 143 LHSAGIIHRDLKPSNIVVKSDCTLKILDFG-----------LARTAGTS------FMMTP 185
Query: 65  YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHL-A 123
           Y        V TR+YRAPEVILG+G+    DIWSVGCI+ E+   + LF   + ++    
Sbjct: 186 Y--------VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNK 237
Query: 124 MMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVPFFYGSF 183
           ++E++  P P+ M K++      YV     + P+ A         +  P+L         
Sbjct: 238 VIEQLGTPCPEFM-KKLQPTVRNYVE----NRPKYAG--------LTFPKL--------- 275
Query: 184 VEFKGYCLAFRCTDCIASFCQNLIMQHVDHS---AGDLTHLLQGLLRYDPTDRLTAREAL 240
                             F  +L     +H+   A     LL  +L  DP  R++  +AL
Sbjct: 276 ------------------FPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDAL 317
Query: 241 RHPFFT 246
           +HP+  
Sbjct: 318 QHPYIN 323

>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious Tri-Substituted Thiophene Based Jnk Inhibitor Length = 363

Iteration: 1
 Score = 70.5 bits (171), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 65/246 (26%), Positives = 103/246 (41%), Gaps = 69/246 (28%)
Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           +H   +IH DLKP N+++ S   +K+ D+              R   +S      F  T 
Sbjct: 142 LHSAGIIHRDLKPSNIVVKSDCTLKILDFG-----------LARTAGTS------FMMTP 184
Query: 65  YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHL-A 123
           Y        V TR+YRAPEVILG+G+    DIWSVGCI+ E+   + LF   + ++    
Sbjct: 185 Y--------VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNK 236
Query: 124 MMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVPFFYGSF 183
           ++E++  P P+ M K++      YV     + P+ A         +  P+L         
Sbjct: 237 VIEQLGTPCPEFM-KKLQPTVRNYVE----NRPKYAG--------LTFPKL--------- 274
Query: 184 VEFKGYCLAFRCTDCIASFCQNLIMQHVDHS---AGDLTHLLQGLLRYDPTDRLTAREAL 240
                             F  +L     +H+   A     LL  +L  DP  R++  +AL
Sbjct: 275 ------------------FPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDAL 316
Query: 241 RHPFFT 246
           +HP+  
Sbjct: 317 QHPYIN 322

>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A Natural Jnk1 Inhibitor Length = 379

Iteration: 1
 Score = 70.5 bits (171), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 62/243 (25%), Positives = 101/243 (41%), Gaps = 63/243 (25%)
Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           +H   +IH DLKP N+++ S   +K+ D+  +                        G++ 
Sbjct: 142 LHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTA---------------------GTSF 180
Query: 65  YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHL-A 123
              P+    V TR+YRAPEVILG+G+    DIWSVGCI+ E+  G  LF   ++++    
Sbjct: 181 MMTPE----VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNK 236
Query: 124 MMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVPFFYGSF 183
           ++E++  P P+ M K++      YV                       P+          
Sbjct: 237 VIEQLGTPCPEFM-KKLQPTVRTYVENR--------------------PK---------- 265
Query: 184 VEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHP 243
             + GY       D +  F  +   +H    A     LL  +L  D + R++  EAL+HP
Sbjct: 266 --YAGYSFEKLFPDVL--FPAD--SEHNALKASQARDLLSKMLVIDASKRISVDEALQHP 319
Query: 244 FFT 246
           +  
Sbjct: 320 YIN 322

>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3 Length = 356

Iteration: 1
 Score = 70.5 bits (171), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 65/243 (26%), Positives = 101/243 (41%), Gaps = 63/243 (25%)
Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           +H   +IH DLKP N+++ S   +K+ D+              R   +S      F  T 
Sbjct: 136 LHSAGIIHRDLKPSNIVVKSDCTLKILDFG-----------LARTAGTS------FMMTP 178
Query: 65  YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHL-A 123
           Y        V TR+YRAPEVILG+G+    DIWSVGCI+ E+   + LF   + ++    
Sbjct: 179 Y--------VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNK 230
Query: 124 MMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVPFFYGSF 183
           ++E++  P P+ M K++      YV     + P+ A         +  P+L    F  S 
Sbjct: 231 VIEQLGTPCPEFM-KKLQPTVRNYVE----NRPKYAG--------LTFPKL----FPDSL 273
Query: 184 VEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHP 243
                                    +H    A     LL  +L  DP  R++  +AL+HP
Sbjct: 274 FPADS--------------------EHNKLKASQARDLLSKMLVIDPAKRISVDDALQHP 313
Query: 244 FFT 246
           +  
Sbjct: 314 YIN 316

>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3 Length = 355

Iteration: 1
 Score = 70.5 bits (171), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 65/243 (26%), Positives = 101/243 (41%), Gaps = 63/243 (25%)
Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           +H   +IH DLKP N+++ S   +K+ D+              R   +S      F  T 
Sbjct: 135 LHSAGIIHRDLKPSNIVVKSDCTLKILDFG-----------LARTAGTS------FMMTP 177
Query: 65  YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHL-A 123
           Y        V TR+YRAPEVILG+G+    DIWSVGCI+ E+   + LF   + ++    
Sbjct: 178 Y--------VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNK 229
Query: 124 MMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVPFFYGSF 183
           ++E++  P P+ M K++      YV     + P+ A         +  P+L    F  S 
Sbjct: 230 VIEQLGTPCPEFM-KKLQPTVRNYVE----NRPKYAG--------LTFPKL----FPDSL 272
Query: 184 VEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHP 243
                                    +H    A     LL  +L  DP  R++  +AL+HP
Sbjct: 273 FPADS--------------------EHNKLKASQARDLLSKMLVIDPAKRISVDDALQHP 312
Query: 244 FFT 246
           +  
Sbjct: 313 YIN 315

>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide Length = 356

Iteration: 1
 Score = 70.5 bits (171), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 65/243 (26%), Positives = 101/243 (41%), Gaps = 63/243 (25%)
Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           +H   +IH DLKP N+++ S   +K+ D+              R   +S      F  T 
Sbjct: 136 LHSAGIIHRDLKPSNIVVKSDCTLKILDFG-----------LARTAGTS------FMMTP 178
Query: 65  YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHL-A 123
           Y        V TR+YRAPEVILG+G+    DIWSVGCI+ E+   + LF   + ++    
Sbjct: 179 Y--------VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNK 230
Query: 124 MMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVPFFYGSF 183
           ++E++  P P+ M K++      YV     + P+ A         +  P+L    F  S 
Sbjct: 231 VIEQLGTPCPEFM-KKLQPTVRNYVE----NRPKYAG--------LTFPKL----FPDSL 273
Query: 184 VEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHP 243
                                    +H    A     LL  +L  DP  R++  +AL+HP
Sbjct: 274 FPADS--------------------EHNKLKASQARDLLSKMLVIDPAKRISVDDALQHP 313
Query: 244 FFT 246
           +  
Sbjct: 314 YIN 316

>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510 With Adp Bound Length = 311

Iteration: 1
 Score = 70.1 bits (170), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 66/245 (26%), Positives = 103/245 (42%), Gaps = 81/245 (33%)
Query: 6   HDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG-STT 64
           H   ++H DLKP+N+L+ S                             A+K+ DFG +  
Sbjct: 136 HQHRILHRDLKPQNLLINSD---------------------------GALKLADFGLARA 168
Query: 65  YERPDQNYI--VSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHENLEH 121
           +  P ++Y   V T  YRAP+V++G   ++   DIWS+GCI  E+ TG+ LF    + + 
Sbjct: 169 FGIPVRSYTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQ 228
Query: 122 LAMMERVLG-PLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVPFFY 180
           L  +  +LG P P+                   +WP+          V +LP  +   F 
Sbjct: 229 LPKIFSILGTPNPR-------------------EWPQ----------VQELPLWKQRTF- 258
Query: 181 GSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREAL 240
               E K +      +  I  FCQ  I             LL  +L +DP  R++AR+A+
Sbjct: 259 -QVFEKKPW------SSIIPGFCQEGI------------DLLSNMLCFDPNKRISARDAM 299
Query: 241 RHPFF 245
            HP+F
Sbjct: 300 NHPYF 304

>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor Length = 307

Iteration: 1
 Score = 70.1 bits (170), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 64/241 (26%), Positives = 95/241 (39%), Gaps = 76/241 (31%)
Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           +H   ++H DLKP+N+L+ SS  IK+ D+  +        Y  +M  +S           
Sbjct: 136 LHSHRVVHRDLKPQNILVTSSGQIKLADFGLA------RIYSFQMALTS----------- 178
Query: 65  YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAM 124
                   +V T  YRAPEV+L   +  P D+WSVGCI  E+   + LF+   +++ L  
Sbjct: 179 --------VVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGK 230
Query: 125 MERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVPFFYGSFV 184
           +  V+G LP                 G  DWP   A          LPR           
Sbjct: 231 ILDVIG-LP-----------------GEEDWPRDVA----------LPR----------- 251
Query: 185 EFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPF 244
                    +    I  F  +     +D    D   LL   L ++P  R++A  AL HP+
Sbjct: 252 ----QAFHSKSAQPIEKFVTD-----IDELGKD---LLLKCLTFNPAKRISAYSALSHPY 299
Query: 245 F 245
           F
Sbjct: 300 F 300

>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510 With Indirubin 3'-Monoxime Bound Length = 313

Iteration: 1
 Score = 70.1 bits (170), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 65/241 (26%), Positives = 102/241 (42%), Gaps = 81/241 (33%)
Query: 10  MIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG-STTYERP 68
           ++H DLKP+N+L+ S                             A+K+ DFG +  +  P
Sbjct: 140 ILHRDLKPQNLLINSD---------------------------GALKLADFGLARAFGIP 172
Query: 69  DQNYI--VSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMM 125
            ++Y   V T  YRAP+V++G   ++   DIWS+GCI  E+ TG+ LF    + + L  +
Sbjct: 173 VRSYTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKI 232
Query: 126 ERVLG-PLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVPFFYGSFV 184
             +LG P P+                   +WP+          V +LP  +   F     
Sbjct: 233 FSILGTPNPR-------------------EWPQ----------VQELPLWKQRTF--QVF 261
Query: 185 EFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPF 244
           E K +      +  I  FCQ  I             LL  +L +DP  R++AR+A+ HP+
Sbjct: 262 EKKPW------SSIIPGFCQEGI------------DLLSNMLCFDPNKRISARDAMNHPY 303
Query: 245 F 245
           F
Sbjct: 304 F 304

>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral Cyclin Length = 308

Iteration: 1
 Score = 69.7 bits (169), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 64/241 (26%), Positives = 95/241 (39%), Gaps = 76/241 (31%)
Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           +H   ++H DLKP+N+L+ SS  IK+ D+  +        Y  +M  +S           
Sbjct: 136 LHSHRVVHRDLKPQNILVTSSGQIKLADFGLA------RIYSFQMALTS----------- 178
Query: 65  YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAM 124
                   +V T  YRAPEV+L   +  P D+WSVGCI  E+   + LF+   +++ L  
Sbjct: 179 --------VVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGK 230
Query: 125 MERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVPFFYGSFV 184
           +  V+G LP                 G  DWP   A          LPR           
Sbjct: 231 ILDVIG-LP-----------------GEEDWPRDVA----------LPR----------- 251
Query: 185 EFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPF 244
                    +    I  F  +     +D    D   LL   L ++P  R++A  AL HP+
Sbjct: 252 ----QAFHSKSAQPIEKFVTD-----IDELGKD---LLLKCLTFNPAKRISAYSALSHPY 299
Query: 245 F 245
           F
Sbjct: 300 F 300

>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp Length = 422

Iteration: 1
 Score = 69.7 bits (169), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 42/144 (29%), Positives = 69/144 (47%), Gaps = 31/144 (21%)
Query: 2   FAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG 61
            A +H   + H D+KP+N+LL                           P ++ +K+ DFG
Sbjct: 171 LAYIHSFGICHRDIKPQNLLL--------------------------DPDTAVLKLCDFG 204
Query: 62  STTY---ERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHE 117
           S        P+ +YI S R+YRAPE+I G   +T   D+WS GC+L EL  G+ +F    
Sbjct: 205 SAKQLVRGEPNVSYICS-RYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDS 263
Query: 118 NLEHLAMMERVLGPLPQHMLKRVD 141
            ++ L  + +VLG   +  ++ ++
Sbjct: 264 GVDQLVEIIKVLGTPTREQIREMN 287

>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From The Structures Cdk6-P19ink4d Inhibitor Complex Length = 326

Iteration: 1
 Score = 69.7 bits (169), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 64/241 (26%), Positives = 95/241 (39%), Gaps = 76/241 (31%)
Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           +H   ++H DLKP+N+L+ SS  IK+ D+  +        Y  +M  +S           
Sbjct: 136 LHSHRVVHRDLKPQNILVTSSGQIKLADFGLA------RIYSFQMALTS----------- 178
Query: 65  YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAM 124
                   +V T  YRAPEV+L   +  P D+WSVGCI  E+   + LF+   +++ L  
Sbjct: 179 --------VVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGK 230
Query: 125 MERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVPFFYGSFV 184
           +  V+G LP                 G  DWP   A          LPR           
Sbjct: 231 ILDVIG-LP-----------------GEEDWPRDVA----------LPR----------- 251
Query: 185 EFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPF 244
                    +    I  F  +     +D    D   LL   L ++P  R++A  AL HP+
Sbjct: 252 ----QAFHSKSAQPIEKFVTD-----IDELGKD---LLLKCLTFNPAKRISAYSALSHPY 299
Query: 245 F 245
           F
Sbjct: 300 F 300

>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In Complexed With Inhibitor Length = 414

Iteration: 1
 Score = 69.7 bits (169), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 42/144 (29%), Positives = 69/144 (47%), Gaps = 31/144 (21%)
Query: 2   FAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG 61
            A +H   + H D+KP+N+LL                           P ++ +K+ DFG
Sbjct: 163 LAYIHSFGICHRDIKPQNLLL--------------------------DPDTAVLKLCDFG 196
Query: 62  STTY---ERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHE 117
           S        P+ +YI S R+YRAPE+I G   +T   D+WS GC+L EL  G+ +F    
Sbjct: 197 SAKQLVRGEPNVSYICS-RYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDS 255
Query: 118 NLEHLAMMERVLGPLPQHMLKRVD 141
            ++ L  + +VLG   +  ++ ++
Sbjct: 256 GVDQLVEIIKVLGTPTREQIREMN 279

>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine Length = 424

Iteration: 1
 Score = 69.7 bits (169), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 42/144 (29%), Positives = 69/144 (47%), Gaps = 31/144 (21%)
Query: 2   FAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG 61
            A +H   + H D+KP+N+LL                           P ++ +K+ DFG
Sbjct: 173 LAYIHSFGICHRDIKPQNLLL--------------------------DPDTAVLKLCDFG 206
Query: 62  STTY---ERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHE 117
           S        P+ +YI S R+YRAPE+I G   +T   D+WS GC+L EL  G+ +F    
Sbjct: 207 SAKQLVRGEPNVSYICS-RYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDS 265
Query: 118 NLEHLAMMERVLGPLPQHMLKRVD 141
            ++ L  + +VLG   +  ++ ++
Sbjct: 266 GVDQLVEIIKVLGTPTREQIREMN 289

>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b) Length = 420

Iteration: 1
 Score = 69.7 bits (169), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 42/144 (29%), Positives = 69/144 (47%), Gaps = 31/144 (21%)
Query: 2   FAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG 61
            A +H   + H D+KP+N+LL                           P ++ +K+ DFG
Sbjct: 169 LAYIHSFGICHRDIKPQNLLL--------------------------DPDTAVLKLCDFG 202
Query: 62  STTY---ERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHE 117
           S        P+ +YI S R+YRAPE+I G   +T   D+WS GC+L EL  G+ +F    
Sbjct: 203 SAKQLVRGEPNVSYICS-RYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDS 261
Query: 118 NLEHLAMMERVLGPLPQHMLKRVD 141
            ++ L  + +VLG   +  ++ ++
Sbjct: 262 GVDQLVEIIKVLGTPTREQIREMN 285

>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor Length = 465

Iteration: 1
 Score = 69.7 bits (169), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 42/144 (29%), Positives = 69/144 (47%), Gaps = 31/144 (21%)
Query: 2   FAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG 61
            A +H   + H D+KP+N+LL                           P ++ +K+ DFG
Sbjct: 214 LAYIHSFGICHRDIKPQNLLL--------------------------DPDTAVLKLCDFG 247
Query: 62  STTY---ERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHE 117
           S        P+ +YI S R+YRAPE+I G   +T   D+WS GC+L EL  G+ +F    
Sbjct: 248 SAKQLVRGEPNVSYICS-RYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDS 306
Query: 118 NLEHLAMMERVLGPLPQHMLKRVD 141
            ++ L  + +VLG   +  ++ ++
Sbjct: 307 GVDQLVEIIKVLGTPTREQIREMN 330

>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A Benzoimidazol Inhibitor Length = 372

Iteration: 1
 Score = 69.3 bits (168), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 42/133 (31%), Positives = 64/133 (48%), Gaps = 31/133 (23%)
Query: 2   FAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG 61
            A +H   + H D+KP+N+LL                           P ++ +K+ DFG
Sbjct: 148 LAYIHSFGICHRDIKPQNLLL--------------------------DPDTAVLKLCDFG 181
Query: 62  ST---TYERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHE 117
           S        P+ +YI S R+YRAPE+I G   +T   D+WS GC+L EL  G+ +F    
Sbjct: 182 SAKQLVRGEPNVSYICS-RYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDS 240
Query: 118 NLEHLAMMERVLG 130
            ++ L  + +VLG
Sbjct: 241 GVDQLVEIIKVLG 253

>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With 3-Indolyl-4- Arylmaleimide Inhibitor Length = 391

Iteration: 1
 Score = 69.3 bits (168), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 42/150 (28%), Positives = 72/150 (48%), Gaps = 31/150 (20%)
Query: 2   FAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG 61
            A +H   + H D+KP+N+LL                           P ++ +K+ DFG
Sbjct: 140 LAYIHSFGICHRDIKPQNLLL--------------------------DPDTAVLKLCDFG 173
Query: 62  ST---TYERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHE 117
           S        P+ +YI S R+YRAPE+I G   +T   D+WS GC+L EL  G+ +F    
Sbjct: 174 SAKQLVRGEPNVSYICS-RYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDS 232
Query: 118 NLEHLAMMERVLGPLPQHMLKRVDRHAEKY 147
            ++ L  + +VLG   +  ++ ++ +  ++
Sbjct: 233 GVDQLVEIIKVLGTPTREQIREMNPNYTEF 262

>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor That Attenuates Hyperactivity In Clock Mutant Mice Length = 350

Iteration: 1
 Score = 68.9 bits (167), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 42/133 (31%), Positives = 64/133 (48%), Gaps = 31/133 (23%)
Query: 2   FAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG 61
            A +H   + H D+KP+N+LL                           P ++ +K+ DFG
Sbjct: 135 LAYIHSFGICHRDIKPQNLLL--------------------------DPDTAVLKLCDFG 168
Query: 62  ST---TYERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHE 117
           S        P+ +YI S R+YRAPE+I G   +T   D+WS GC+L EL  G+ +F    
Sbjct: 169 SAKQLVRGEPNVSYICS-RYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDS 227
Query: 118 NLEHLAMMERVLG 130
            ++ L  + +VLG
Sbjct: 228 GVDQLVEIIKVLG 240

>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta. Length = 352

Iteration: 1
 Score = 68.9 bits (167), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 42/133 (31%), Positives = 64/133 (48%), Gaps = 31/133 (23%)
Query: 2   FAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG 61
            A +H   + H D+KP+N+LL                           P ++ +K+ DFG
Sbjct: 135 LAYIHSFGICHRDIKPQNLLL--------------------------DPDTAVLKLCDFG 168
Query: 62  ST---TYERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHE 117
           S        P+ +YI S R+YRAPE+I G   +T   D+WS GC+L EL  G+ +F    
Sbjct: 169 SAKQLVRGEPNVSYICS-RYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDS 227
Query: 118 NLEHLAMMERVLG 130
            ++ L  + +VLG
Sbjct: 228 GVDQLVEIIKVLG 240

>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With 6-Bromoindirubin-3'-Oxime Length = 350

Iteration: 1
 Score = 68.9 bits (167), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 42/133 (31%), Positives = 64/133 (48%), Gaps = 31/133 (23%)
Query: 2   FAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG 61
            A +H   + H D+KP+N+LL                           P ++ +K+ DFG
Sbjct: 135 LAYIHSFGICHRDIKPQNLLL--------------------------DPDTAVLKLCDFG 168
Query: 62  ST---TYERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHE 117
           S        P+ +YI S R+YRAPE+I G   +T   D+WS GC+L EL  G+ +F    
Sbjct: 169 SAKQLVRGEPNVSYICS-RYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDS 227
Query: 118 NLEHLAMMERVLG 130
            ++ L  + +VLG
Sbjct: 228 GVDQLVEIIKVLG 240

>pdb|3EB0|A Chain A, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum In Complex With Indirubin E804 Length = 383

Iteration: 1
 Score = 68.2 bits (165), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 46/168 (27%), Positives = 79/168 (47%), Gaps = 35/168 (20%)
Query: 3   AVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGS 62
             +H L + H D+KP+N+L+ S                          K + +K+ DFGS
Sbjct: 155 GFIHSLGICHRDIKPQNLLVNS--------------------------KDNTLKLCDFGS 188
Query: 63  TTYERPDQNYI--VSTRHYRAPEVILGLG-WTYPCDIWSVGCILVELCTGEALFQTHENL 119
                P +  +  + +R YRAPE++LG   +T   D+WS+GC+  EL  G+ LF    ++
Sbjct: 189 AKKLIPSEPSVAXICSRFYRAPELMLGATEYTPSIDLWSIGCVFGELILGKPLFSGETSI 248
Query: 120 EHLAMMERVLG-PLPQHMLKRVDRHAE-KYVRRGRLDW----PEGAAS 161
           + L  + +++G P  + M++    + E ++      DW    PEG  S
Sbjct: 249 DQLVRIIQIMGTPTKEQMIRMNPHYTEVRFPTLKAKDWRKILPEGTPS 296

>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182 Length = 353

Iteration: 1
 Score = 67.8 bits (164), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 68/247 (27%), Positives = 101/247 (40%), Gaps = 61/247 (24%)
Query: 4   VMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGST 63
           V+H   +IH DLKP N+L+ S+  +KV D+              R+   SA    D    
Sbjct: 127 VLHGSNVIHRDLKPSNLLINSNCDLKVCDFG-----------LARIIDESA---ADNSEP 172
Query: 64  TYERPDQNYIVSTRHYRAPEVIL-GLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHL 122
           T ++      V+TR YRAPEV+L    ++   D+WS GCIL EL     +F   +    L
Sbjct: 173 TGQQSGMTEXVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQL 232
Query: 123 AMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVPFFYGS 182
            ++  ++G            H++  +R       E   +RE IKS+   P   +   +  
Sbjct: 233 LLIFGIIG----------TPHSDNDLR-----CIESPRAREYIKSLPMYPAAPLEKMFPR 277
Query: 183 FVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRH 242
            V  KG                                LLQ +L +DP  R+TA+EAL H
Sbjct: 278 -VNPKG------------------------------IDLLQRMLVFDPAKRITAKEALEH 306
Query: 243 PFFTRDH 249
           P+    H
Sbjct: 307 PYLQTYH 313

>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex With An Mkk5 Binding Fragment Length = 442

Iteration: 1
 Score = 67.8 bits (164), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 68/249 (27%), Positives = 102/249 (40%), Gaps = 74/249 (29%)
Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDY---KSSLHTPKDSSYFKRMPKSSAIKVIDFG 61
           MH   +IH DLKP N+L+  +  +K+ D+   +    +P +  YF               
Sbjct: 175 MHSAQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFM-------------- 220
Query: 62  STTYERPDQNYIVSTRHYRAPEVILGL-GWTYPCDIWSVGCILVELCTGEALFQTHENLE 120
            T Y        V+TR YRAPE++L L  +T   D+WSVGCI  E+     LF     + 
Sbjct: 221 -TEY--------VATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVH 271
Query: 121 HLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVPFFY 180
            L ++  VLG     +++ V   AE+               R  I+S+   PR  VP+  
Sbjct: 272 QLQLIMMVLGTPSPAVIQAVG--AERV--------------RAYIQSLP--PRQPVPW-- 311
Query: 181 GSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREAL 240
                                     +    D  A     LL  +LR++P+ R++A  AL
Sbjct: 312 ------------------------ETVYPGADRQA---LSLLGRMLRFEPSARISAAAAL 344
Query: 241 RHPFFTRDH 249
           RHPF  + H
Sbjct: 345 RHPFLAKYH 353

>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol Length = 360

Iteration: 1
 Score = 67.4 bits (163), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 61/250 (24%), Positives = 99/250 (39%), Gaps = 81/250 (32%)
Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           +H   ++H DLKP N+LL ++                             +K+ DFG   
Sbjct: 140 IHSANVLHRDLKPSNLLLNTT---------------------------XDLKIXDFGLAR 172
Query: 65  YERPDQNYI------VSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHE 117
              PD ++       V+TR YRAPE++L   G+T   DIWSVGCIL E+ +   +F    
Sbjct: 173 VADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 232
Query: 118 NLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVP 177
            L+ L     +LG L                         G+ S+E +  ++ L      
Sbjct: 233 YLDQL---NHILGIL-------------------------GSPSQEDLNXIINL------ 258
Query: 178 FFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAR 237
                  + + Y L+    + +     N +  + D  A D   LL  +L ++P  R+   
Sbjct: 259 -------KARNYLLSLPHKNKVP---WNRLFPNADSKALD---LLDKMLTFNPHKRIEVE 305
Query: 238 EALRHPFFTR 247
           +AL HP+  +
Sbjct: 306 QALAHPYLEQ 315

>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain Length = 311

Iteration: 1
 Score = 67.4 bits (163), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 60/244 (24%), Positives = 94/244 (38%), Gaps = 88/244 (36%)
Query: 11  IHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ 70
           IH D+KPEN+L+                            K S IK+ DFG         
Sbjct: 124 IHRDVKPENILIT---------------------------KHSVIKLCDFGFARLLTGPS 156
Query: 71  NYI---VSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMME 126
           +Y    V+TR YR+PE+++G   +  P D+W++GC+  EL +G  L+    +++ L ++ 
Sbjct: 157 DYYDDEVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQLYLIR 216
Query: 127 RVLGPLPQHMLKRVDRHAE-----KYVRRGRLDWPEGAASRESIKSVMKLPRLQVPFFYG 181
           + LG L       + RH +     +Y    ++  PE     E     +K P +  P    
Sbjct: 217 KTLGDL-------IPRHQQVFSTNQYFSGVKIPDPEDMEPLE-----LKFPNISYPAL-- 262
Query: 182 SFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALR 241
                                                  LL+G L  DPT+RLT  + L 
Sbjct: 263 --------------------------------------GLLKGCLHMDPTERLTCEQLLH 284
Query: 242 HPFF 245
           HP+F
Sbjct: 285 HPYF 288

>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1 In With Amp-Pnp Length = 325

Iteration: 1
 Score = 67.4 bits (163), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 39/116 (33%), Positives = 58/116 (50%), Gaps = 27/116 (23%)
Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           MHD+ ++H DLKPEN+L          D   +L                 IK+IDFG   
Sbjct: 122 MHDVGVVHRDLKPENLLFT--------DENDNLE----------------IKIIDFGFAR 157
Query: 65  YERPDQNYIVS---TRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHE 117
            + PD   + +   T HY APE++   G+   CD+WS+G IL  + +G+  FQ+H+
Sbjct: 158 LKPPDNQPLKTPCFTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSHD 213

>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor Length = 398

Iteration: 1
 Score = 67.4 bits (163), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 68/249 (27%), Positives = 102/249 (40%), Gaps = 74/249 (29%)
Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDY---KSSLHTPKDSSYFKRMPKSSAIKVIDFG 61
           MH   +IH DLKP N+L+  +  +K+ D+   +    +P +  YF               
Sbjct: 174 MHSAQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFM-------------- 219
Query: 62  STTYERPDQNYIVSTRHYRAPEVILGL-GWTYPCDIWSVGCILVELCTGEALFQTHENLE 120
            T Y        V+TR YRAPE++L L  +T   D+WSVGCI  E+     LF     + 
Sbjct: 220 -TEY--------VATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVH 270
Query: 121 HLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVPFFY 180
            L ++  VLG     +++ V   AE+               R  I+S+   PR  VP+  
Sbjct: 271 QLQLIMMVLGTPSPAVIQAVG--AERV--------------RAYIQSLP--PRQPVPW-- 310
Query: 181 GSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREAL 240
                                     +    D  A     LL  +LR++P+ R++A  AL
Sbjct: 311 ------------------------ETVYPGADRQA---LSLLGRMLRFEPSARISAAAAL 343
Query: 241 RHPFFTRDH 249
           RHPF  + H
Sbjct: 344 RHPFLAKYH 352

>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3 Length = 353

Iteration: 1
 Score = 67.4 bits (163), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 68/247 (27%), Positives = 101/247 (40%), Gaps = 61/247 (24%)
Query: 4   VMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGST 63
           V+H   +IH DLKP N+L+ S+  +KV D+              R+   SA    D    
Sbjct: 127 VLHGSNVIHRDLKPSNLLINSNCDLKVCDFG-----------LARIIDESA---ADNSEP 172
Query: 64  TYERPDQNYIVSTRHYRAPEVIL-GLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHL 122
           T ++      V+TR YRAPEV+L    ++   D+WS GCIL EL     +F   +    L
Sbjct: 173 TGQQSGMTEYVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQL 232
Query: 123 AMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVPFFYGS 182
            ++  ++G            H++  +R       E   +RE IKS+   P   +   +  
Sbjct: 233 LLIFGIIG----------TPHSDNDLR-----CIESPRAREYIKSLPMYPAAPLEKMFPR 277
Query: 183 FVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRH 242
            V  KG                                LLQ +L +DP  R+TA+EAL H
Sbjct: 278 -VNPKG------------------------------IDLLQRMLVFDPAKRITAKEALEH 306
Query: 243 PFFTRDH 249
           P+    H
Sbjct: 307 PYLQTYH 313

>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5 Length = 288

Iteration: 1
 Score = 67.0 bits (162), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 62/252 (24%), Positives = 101/252 (40%), Gaps = 80/252 (31%)
Query: 2   FAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG 61
            A  HD  ++H DLKP+N+L+                            +   +K+ DFG
Sbjct: 113 IAYCHDRRVLHRDLKPQNLLI---------------------------NREGELKIADFG 145
Query: 62  -STTYERPDQNYI--VSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHE 117
            +  +  P + Y   V T  YRAP+V++G   ++   DIWSVGCI  E+  G  LF    
Sbjct: 146 LARAFGIPVRKYTHEVVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGAPLFPGVS 205
Query: 118 NLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVP 177
             + L  + R+LG  P                    +WP          +V +LP+    
Sbjct: 206 EADQLMRIFRILGT-PNSK-----------------NWP----------NVTELPKYDPN 237
Query: 178 FFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAR 237
           F     + ++ +                  ++ +D S  D   LL  +L+ DP  R+TA+
Sbjct: 238 FTVYEPLPWESF------------------LKGLDESGID---LLSKMLKLDPNQRITAK 276
Query: 238 EALRHPFFTRDH 249
           +AL H +F  ++
Sbjct: 277 QALEHAYFKENN 288

>pdb|3JUH|A Chain A, Crystal Structure Of A Mutant Of Human Protein Kinase Ck2alpha With Altered Cosubstrate Specificity Length = 335

Iteration: 1
 Score = 67.0 bits (162), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 60/244 (24%), Positives = 103/244 (42%), Gaps = 71/244 (29%)
Query: 6   HDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTY 65
           H + ++H D+KP NV L+  E+ K                         +++ID+G   +
Sbjct: 148 HSMGIMHRDVKPHNV-LIDHEHRK-------------------------LRLIDWGLAEF 181
Query: 66  ERPDQNYI--VSTRHYRAPEVILGLG-WTYPCDIWSVGCILVELC-TGEALFQTHENLEH 121
             P Q Y   V++R+++ PE+++    + Y  D+WS+GC+L  +    E  F  H+N + 
Sbjct: 182 YHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQ 241
Query: 122 LAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVPFFYG 181
           L  + +VLG   + +   +D++                       ++   PR        
Sbjct: 242 LVRIAKVLG--TEDLYDYIDKY-----------------------NIELDPR-------- 268
Query: 182 SFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALR 241
            F +  G     R    + S  Q+L+       + +    L  LLRYD   RLTAREA+ 
Sbjct: 269 -FNDILGRHSRKRWERFVHSENQHLV-------SPEALDFLDKLLRYDHQSRLTAREAME 320
Query: 242 HPFF 245
           HP+F
Sbjct: 321 HPYF 324

>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate Ligand Complex Length = 288

Iteration: 1
 Score = 67.0 bits (162), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 62/252 (24%), Positives = 101/252 (40%), Gaps = 80/252 (31%)
Query: 2   FAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG 61
            A  HD  ++H DLKP+N+L+                            +   +K+ DFG
Sbjct: 113 IAYCHDRRVLHRDLKPQNLLI---------------------------NREGELKIADFG 145
Query: 62  -STTYERPDQNYI--VSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHE 117
            +  +  P + Y   V T  YRAP+V++G   ++   DIWSVGCI  E+  G  LF    
Sbjct: 146 LARAFGIPVRKYTHEVVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVS 205
Query: 118 NLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVP 177
             + L  + R+LG  P                    +WP          +V +LP+    
Sbjct: 206 EADQLMRIFRILGT-PNSK-----------------NWP----------NVTELPKYDPN 237
Query: 178 FFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAR 237
           F     + ++ +                  ++ +D S  D   LL  +L+ DP  R+TA+
Sbjct: 238 FTVYEPLPWESF------------------LKGLDESGID---LLSKMLKLDPNQRITAK 276
Query: 238 EALRHPFFTRDH 249
           +AL H +F  ++
Sbjct: 277 QALEHAYFKENN 288

>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94 Length = 360

Iteration: 1
 Score = 67.0 bits (162), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 61/250 (24%), Positives = 99/250 (39%), Gaps = 81/250 (32%)
Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           +H   ++H DLKP N+LL ++                             +K+ DFG   
Sbjct: 140 IHSANVLHRDLKPSNLLLNTT---------------------------XDLKICDFGLAR 172
Query: 65  YERPDQNYI------VSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHE 117
              PD ++       V+TR YRAPE++L   G+T   DIWSVGCIL E+ +   +F    
Sbjct: 173 VADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 232
Query: 118 NLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVP 177
            L+ L     +LG L                         G+ S+E +  ++ L      
Sbjct: 233 YLDQL---NHILGIL-------------------------GSPSQEDLNXIINL------ 258
Query: 178 FFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAR 237
                  + + Y L+    + +     N +  + D  A D   LL  +L ++P  R+   
Sbjct: 259 -------KARNYLLSLPHKNKVP---WNRLFPNADSKALD---LLDKMLTFNPHKRIEVE 305
Query: 238 EALRHPFFTR 247
           +AL HP+  +
Sbjct: 306 QALAHPYLEQ 315

>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine Inhibitor Length = 369

Iteration: 1
 Score = 67.0 bits (162), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 63/243 (25%), Positives = 100/243 (41%), Gaps = 63/243 (25%)
Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           +H   +IH DLKP N+++ S   +K+ D+              R   +S      F  T 
Sbjct: 147 LHSAGIIHRDLKPSNIVVKSDCTLKILDFG-----------LARTAGTS------FMMTP 189
Query: 65  YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHL-A 123
           Y        V TR+YRAPEVILG+G+    D+WSVGCI+ E+   + LF   + ++    
Sbjct: 190 Y--------VVTRYYRAPEVILGMGYKENVDLWSVGCIMGEMVCHKILFPGRDYIDQWNK 241
Query: 124 MMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVPFFYGSF 183
           ++E++  P P+ M K++      YV                       P+          
Sbjct: 242 VIEQLGTPCPEFM-KKLQPTVRTYVENR--------------------PK---------- 270
Query: 184 VEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHP 243
             + GY       D +  F  +   +H    A     LL  +L  D + R++  EAL+HP
Sbjct: 271 --YAGYSFEKLFPDVL--FPAD--SEHNKLKASQARDLLSKMLVIDASKRISVDEALQHP 324
Query: 244 FFT 246
           +  
Sbjct: 325 YIN 327

>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7 Length = 353

Iteration: 1
 Score = 67.0 bits (162), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 68/247 (27%), Positives = 101/247 (40%), Gaps = 61/247 (24%)
Query: 4   VMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGST 63
           V+H   +IH DLKP N+L+ S+  +KV D+              R+   SA    D    
Sbjct: 127 VLHGSNVIHRDLKPSNLLINSNCDLKVCDFG-----------LARIIDESA---ADNSEP 172
Query: 64  TYERPDQNYIVSTRHYRAPEVIL-GLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHL 122
           T ++      V+TR YRAPEV+L    ++   D+WS GCIL EL     +F   +    L
Sbjct: 173 TGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQL 232
Query: 123 AMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVPFFYGS 182
            ++  ++G            H++  +R       E   +RE IKS+   P   +   +  
Sbjct: 233 LLIFGIIG----------TPHSDNDLR-----CIESPRAREYIKSLPMYPAAPLEKMFPR 277
Query: 183 FVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRH 242
            V  KG                                LLQ +L +DP  R+TA+EAL H
Sbjct: 278 -VNPKG------------------------------IDLLQRMLVFDPAKRITAKEALEH 306
Query: 243 PFFTRDH 249
           P+    H
Sbjct: 307 PYLQTYH 313

>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 300

Iteration: 1
 Score = 67.0 bits (162), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 68/248 (27%), Positives = 99/248 (39%), Gaps = 80/248 (32%)
Query: 2   FAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG 61
            A  H   ++H DLKPEN LL+++E                           AIK+ DFG
Sbjct: 117 LAFCHSHRVLHRDLKPEN-LLINTE--------------------------GAIKLADFG 149
Query: 62  -STTYERPDQNYI--VSTRHYRAPEVILGLGW-TYPCDIWSVGCILVELCTGEALFQTHE 117
            +  +  P + Y   V T  YRAPE++LG  + +   DIWS+GCI  E+ T  ALF    
Sbjct: 150 LARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDS 209
Query: 118 NLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVP 177
            ++ L  + R LG  P  ++                 WP           V  +P  +  
Sbjct: 210 EIDQLFRIFRTLG-TPDEVV-----------------WP----------GVTSMPDYKPS 241
Query: 178 FFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAR 237
           F   +  +F                    ++  +D    D   LL  +L YDP  R++A+
Sbjct: 242 FPKWARQDFSK------------------VVPPLDE---DGRSLLSQMLHYDPNKRISAK 280
Query: 238 EALRHPFF 245
            AL HPFF
Sbjct: 281 AALAHPFF 288

>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor Length = 358

Iteration: 1
 Score = 67.0 bits (162), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 63/243 (25%), Positives = 100/243 (41%), Gaps = 63/243 (25%)
Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           +H   +IH DLKP N+++ S   +K+ D+              R   +S      F  T 
Sbjct: 136 LHSAGIIHRDLKPSNIVVKSDCTLKILDFG-----------LARTAGTS------FMMTP 178
Query: 65  YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHL-A 123
           Y        V TR+YRAPEVILG+G+    D+WSVGCI+ E+   + LF   + ++    
Sbjct: 179 Y--------VVTRYYRAPEVILGMGYKENVDLWSVGCIMGEMVCHKILFPGRDYIDQWNK 230
Query: 124 MMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVPFFYGSF 183
           ++E++  P P+ M K++      YV                       P+          
Sbjct: 231 VIEQLGTPCPEFM-KKLQPTVRTYVENR--------------------PK---------- 259
Query: 184 VEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHP 243
             + GY       D +  F  +   +H    A     LL  +L  D + R++  EAL+HP
Sbjct: 260 --YAGYSFEKLFPDVL--FPAD--SEHNKLKASQARDLLSKMLVIDASKRISVDEALQHP 313
Query: 244 FFT 246
           +  
Sbjct: 314 YIN 316

>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Length = 370

Iteration: 1
 Score = 66.6 bits (161), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 61/243 (25%), Positives = 99/243 (40%), Gaps = 63/243 (25%)
Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           +H   +IH DLKP N+++ S   +K+ D+  +                        G++ 
Sbjct: 142 LHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTA---------------------GTSF 180
Query: 65  YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHL-A 123
              P+    V TR+YRAPEVILG+G+    DIWSVGCI+ E+   + LF   + ++    
Sbjct: 181 MMEPE----VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVCHKILFPGRDYIDQWNK 236
Query: 124 MMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVPFFYGSF 183
           ++E++  P P  M K++      YV                       P+          
Sbjct: 237 VIEQLGTPCPAFM-KKLQPTVRNYVENR--------------------PK---------- 265
Query: 184 VEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHP 243
             + GY       D +  F  +   +H    A     LL  +L  D + R++  EAL+HP
Sbjct: 266 --YAGYSFEKLFPDVL--FPAD--SEHNKLKASQARDLLSKMLVIDASKRISVDEALQHP 319
Query: 244 FFT 246
           +  
Sbjct: 320 YIN 322

>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human Cyclin A3 Complex With Atp Length = 301

Iteration: 1
 Score = 66.6 bits (161), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 68/248 (27%), Positives = 99/248 (39%), Gaps = 80/248 (32%)
Query: 2   FAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG 61
            A  H   ++H DLKPEN LL+++E                           AIK+ DFG
Sbjct: 119 LAFCHSHRVLHRDLKPEN-LLINTE--------------------------GAIKLADFG 151
Query: 62  -STTYERPDQNYI--VSTRHYRAPEVILGLGW-TYPCDIWSVGCILVELCTGEALFQTHE 117
            +  +  P + Y   V T  YRAPE++LG  + +   DIWS+GCI  E+ T  ALF    
Sbjct: 152 LARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDS 211
Query: 118 NLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVP 177
            ++ L  + R LG  P  ++                 WP           V  +P  +  
Sbjct: 212 EIDQLFRIFRTLG-TPDEVV-----------------WP----------GVTSMPDYKPS 243
Query: 178 FFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAR 237
           F   +  +F                    ++  +D    D   LL  +L YDP  R++A+
Sbjct: 244 FPKWARQDFSK------------------VVPPLDE---DGRSLLSQMLHYDPNKRISAK 282
Query: 238 EALRHPFF 245
            AL HPFF
Sbjct: 283 AALAHPFF 290

>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta (Gsk3b) In Complex With Inhibitor 142 Length = 430

Iteration: 1
 Score = 66.6 bits (161), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 41/144 (28%), Positives = 68/144 (47%), Gaps = 31/144 (21%)
Query: 2   FAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG 61
            A +H   + H D+KP+N+LL                           P ++ +K+ DFG
Sbjct: 169 LAYIHSFGICHRDIKPQNLLL--------------------------DPDTAVLKLCDFG 202
Query: 62  STTY---ERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHE 117
           S        P+ + I S R+YRAPE+I G   +T   D+WS GC+L EL  G+ +F    
Sbjct: 203 SAKQLVRGEPNVSXICS-RYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDS 261
Query: 118 NLEHLAMMERVLGPLPQHMLKRVD 141
            ++ L  + +VLG   +  ++ ++
Sbjct: 262 GVDQLVEIIKVLGTPTREQIREMN 285

>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2 Length = 364

Iteration: 1
 Score = 66.6 bits (161), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 61/250 (24%), Positives = 99/250 (39%), Gaps = 81/250 (32%)
Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           +H   ++H DLKP N+LL ++                             +K+ DFG   
Sbjct: 144 IHSANVLHRDLKPSNLLLNTT---------------------------XDLKICDFGLAR 176
Query: 65  YERPDQNYI------VSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHE 117
              PD ++       V+TR YRAPE++L   G+T   DIWSVGCIL E+ +   +F    
Sbjct: 177 VADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 236
Query: 118 NLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVP 177
            L+ L     +LG L                         G+ S+E +  ++ L      
Sbjct: 237 YLDQL---NHILGIL-------------------------GSPSQEDLNCIINL------ 262
Query: 178 FFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAR 237
                  + + Y L+    + +     N +  + D  A D   LL  +L ++P  R+   
Sbjct: 263 -------KARNYLLSLPHKNKVP---WNRLFPNADSKALD---LLDKMLTFNPHKRIEVE 309
Query: 238 EALRHPFFTR 247
           +AL HP+  +
Sbjct: 310 QALAHPYLEQ 319

>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 300

Iteration: 1
 Score = 66.6 bits (161), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 68/248 (27%), Positives = 99/248 (39%), Gaps = 80/248 (32%)
Query: 2   FAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG 61
            A  H   ++H DLKPEN LL+++E                           AIK+ DFG
Sbjct: 118 LAFCHSHRVLHRDLKPEN-LLINTE--------------------------GAIKLADFG 150
Query: 62  -STTYERPDQNYI--VSTRHYRAPEVILGLGW-TYPCDIWSVGCILVELCTGEALFQTHE 117
            +  +  P + Y   V T  YRAPE++LG  + +   DIWS+GCI  E+ T  ALF    
Sbjct: 151 LARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDS 210
Query: 118 NLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVP 177
            ++ L  + R LG  P  ++                 WP           V  +P  +  
Sbjct: 211 EIDQLFRIFRTLG-TPDEVV-----------------WP----------GVTSMPDYKPS 242
Query: 178 FFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAR 237
           F   +  +F                    ++  +D    D   LL  +L YDP  R++A+
Sbjct: 243 FPKWARQDFSK------------------VVPPLDE---DGRSLLSQMLHYDPNKRISAK 281
Query: 238 EALRHPFF 245
            AL HPFF
Sbjct: 282 AALAHPFF 289

>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3 Complex With Atp Length = 299

Iteration: 1
 Score = 66.6 bits (161), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 68/248 (27%), Positives = 99/248 (39%), Gaps = 80/248 (32%)
Query: 2   FAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG 61
            A  H   ++H DLKPEN LL+++E                           AIK+ DFG
Sbjct: 117 LAFCHSHRVLHRDLKPEN-LLINTE--------------------------GAIKLADFG 149
Query: 62  -STTYERPDQNYI--VSTRHYRAPEVILGLGW-TYPCDIWSVGCILVELCTGEALFQTHE 117
            +  +  P + Y   V T  YRAPE++LG  + +   DIWS+GCI  E+ T  ALF    
Sbjct: 150 LARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDS 209
Query: 118 NLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVP 177
            ++ L  + R LG  P  ++                 WP           V  +P  +  
Sbjct: 210 EIDQLFRIFRTLG-TPDEVV-----------------WP----------GVTSMPDYKPS 241
Query: 178 FFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAR 237
           F   +  +F                    ++  +D    D   LL  +L YDP  R++A+
Sbjct: 242 FPKWARQDFSK------------------VVPPLDE---DGRSLLSQMLHYDPNKRISAK 280
Query: 238 EALRHPFF 245
            AL HPFF
Sbjct: 281 AALAHPFF 288

>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 299

Iteration: 1
 Score = 66.6 bits (161), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 68/248 (27%), Positives = 99/248 (39%), Gaps = 80/248 (32%)
Query: 2   FAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG 61
            A  H   ++H DLKPEN LL+++E                           AIK+ DFG
Sbjct: 116 LAFCHSHRVLHRDLKPEN-LLINTE--------------------------GAIKLADFG 148
Query: 62  -STTYERPDQNYI--VSTRHYRAPEVILGLGW-TYPCDIWSVGCILVELCTGEALFQTHE 117
            +  +  P + Y   V T  YRAPE++LG  + +   DIWS+GCI  E+ T  ALF    
Sbjct: 149 LARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDS 208
Query: 118 NLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVP 177
            ++ L  + R LG  P  ++                 WP           V  +P  +  
Sbjct: 209 EIDQLFRIFRTLG-TPDEVV-----------------WP----------GVTSMPDYKPS 240
Query: 178 FFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAR 237
           F   +  +F                    ++  +D    D   LL  +L YDP  R++A+
Sbjct: 241 FPKWARQDFSK------------------VVPPLDE---DGRSLLSQMLHYDPNKRISAK 279
Query: 238 EALRHPFF 245
            AL HPFF
Sbjct: 280 AALAHPFF 287

>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A Imidazopyridine Inhibitor Length = 382

Iteration: 1
 Score = 66.6 bits (161), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 41/133 (30%), Positives = 63/133 (47%), Gaps = 31/133 (23%)
Query: 2   FAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG 61
            A +H   + H D+KP+N+LL                           P ++ +K+ DFG
Sbjct: 147 LAYIHSFGICHRDIKPQNLLL--------------------------DPDTAVLKLCDFG 180
Query: 62  ST---TYERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHE 117
           S        P+ + I S R+YRAPE+I G   +T   D+WS GC+L EL  G+ +F    
Sbjct: 181 SAKQLVRGEPNVSXICS-RYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDS 239
Query: 118 NLEHLAMMERVLG 130
            ++ L  + +VLG
Sbjct: 240 GVDQLVEIIKVLG 252

>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii, 25.M01780 Or Tgme49_007820 Length = 458

Iteration: 1
 Score = 66.6 bits (161), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 72/258 (27%), Positives = 109/258 (42%), Gaps = 46/258 (17%)
Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDY--KSSLHTPKD-SSYFKRMPKSSAIKVIDFG 61
           +H   ++H DLKP N L+     +KV D+    ++  P++ +S     P+   + ++ F 
Sbjct: 172 VHSAGILHRDLKPANCLVNQDCSVKVCDFGLARTVDYPENGNSQLPISPREDDMNLVTFP 231
Query: 62  STTYERPDQNYIVSTRHYRAPEVIL-GLGWTYPCDIWSVGCILVELCTGEALFQTHENLE 120
            T   +      V TR YRAPE+IL    +T   D+WS+GCI  EL     L    EN+ 
Sbjct: 232 HTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAEL-----LNMIKENVA 286
Query: 121 HLAMMERVLGPL-------PQHMLKRVDRHAEKYVRRGRLDWPE------GAASRESIKS 167
           + A      GPL       P    ++      K+  RG  D         G  S E I++
Sbjct: 287 YHADR----GPLFPGSSCFPLSPDQKAGNDF-KFHTRGNRDQLNVIFNILGTPSEEDIEA 341
Query: 168 VMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLR 227
              L +     +   F + +G  LA R                   S+ D  HLL+ +L 
Sbjct: 342 ---LEKEDAKRYIRIFPKREGTDLAER----------------FPASSADAIHLLKRMLV 382
Query: 228 YDPTDRLTAREALRHPFF 245
           ++P  R+T  E L HPFF
Sbjct: 383 FNPNKRITINECLAHPFF 400

>pdb|1JWH|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme Length = 337

Iteration: 1
 Score = 66.6 bits (161), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 59/244 (24%), Positives = 103/244 (42%), Gaps = 71/244 (29%)
Query: 6   HDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTY 65
           H + ++H D+KP NV+ +  E+ K                         +++ID+G   +
Sbjct: 148 HSMGIMHRDVKPHNVM-IDHEHRK-------------------------LRLIDWGLAEF 181
Query: 66  ERPDQNYIV--STRHYRAPEVILGLG-WTYPCDIWSVGCILVELC-TGEALFQTHENLEH 121
             P Q Y V  ++R+++ PE+++    + Y  D+WS+GC+L  +    E  F  H+N + 
Sbjct: 182 YHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQ 241
Query: 122 LAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVPFFYG 181
           L  + +VLG   + +   +D++                       ++   PR        
Sbjct: 242 LVRIAKVLG--TEDLYDYIDKY-----------------------NIELDPR-------- 268
Query: 182 SFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALR 241
            F +  G     R    + S  Q+L+       + +    L  LLRYD   RLTAREA+ 
Sbjct: 269 -FNDILGRHSRKRWERFVHSENQHLV-------SPEALDFLDKLLRYDHQSRLTAREAME 320
Query: 242 HPFF 245
           HP+F
Sbjct: 321 HPYF 324

>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75 Length = 360

Iteration: 1
 Score = 66.6 bits (161), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 61/250 (24%), Positives = 99/250 (39%), Gaps = 81/250 (32%)
Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           +H   ++H DLKP N+LL ++                             +K+ DFG   
Sbjct: 140 IHSANVLHRDLKPSNLLLNTT---------------------------XDLKICDFGLAR 172
Query: 65  YERPDQNYI------VSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHE 117
              PD ++       V+TR YRAPE++L   G+T   DIWSVGCIL E+ +   +F    
Sbjct: 173 VADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 232
Query: 118 NLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVP 177
            L+ L     +LG L                         G+ S+E +  ++ L      
Sbjct: 233 YLDQL---NHILGIL-------------------------GSPSQEDLNCIINL------ 258
Query: 178 FFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAR 237
                  + + Y L+    + +     N +  + D  A D   LL  +L ++P  R+   
Sbjct: 259 -------KARNYLLSLPHKNKVP---WNRLFPNADSKALD---LLDKMLTFNPHKRIEVE 305
Query: 238 EALRHPFFTR 247
           +AL HP+  +
Sbjct: 306 QALAHPYLEQ 315

>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-3beta Inhibitors Length = 371

Iteration: 1
 Score = 66.2 bits (160), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 41/133 (30%), Positives = 63/133 (47%), Gaps = 31/133 (23%)
Query: 2   FAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG 61
            A +H   + H D+KP+N+LL                           P ++ +K+ DFG
Sbjct: 147 LAYIHSFGICHRDIKPQNLLL--------------------------DPDTAVLKLCDFG 180
Query: 62  ST---TYERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHE 117
           S        P+ + I S R+YRAPE+I G   +T   D+WS GC+L EL  G+ +F    
Sbjct: 181 SAKQLVRGEPNVSXICS-RYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDS 239
Query: 118 NLEHLAMMERVLG 130
            ++ L  + +VLG
Sbjct: 240 GVDQLVEIIKVLG 252

>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5 Length = 288

Iteration: 1
 Score = 66.2 bits (160), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 61/252 (24%), Positives = 101/252 (40%), Gaps = 80/252 (31%)
Query: 2   FAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG 61
            A  HD  ++H DLKP+N+L+                            +   +K+ DFG
Sbjct: 113 IAYCHDRRVLHRDLKPQNLLI---------------------------NREGELKIADFG 145
Query: 62  -STTYERPDQNYI--VSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHE 117
            +  +  P + Y   + T  YRAP+V++G   ++   DIWSVGCI  E+  G  LF    
Sbjct: 146 LARAFGIPVRKYTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVS 205
Query: 118 NLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVP 177
             + L  + R+LG  P                    +WP          +V +LP+    
Sbjct: 206 EADQLMRIFRILGT-PNSK-----------------NWP----------NVTELPKYDPN 237
Query: 178 FFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAR 237
           F     + ++ +                  ++ +D S  D   LL  +L+ DP  R+TA+
Sbjct: 238 FTVYEPLPWESF------------------LKGLDESGID---LLSKMLKLDPNQRITAK 276
Query: 238 EALRHPFFTRDH 249
           +AL H +F  ++
Sbjct: 277 QALEHAYFKENN 288

>pdb|3NGA|A Chain A, Human Ck2 Catalytic Domain In Complex With Cx-4945 Length = 333

Iteration: 1
 Score = 66.2 bits (160), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 59/244 (24%), Positives = 103/244 (42%), Gaps = 71/244 (29%)
Query: 6   HDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTY 65
           H + ++H D+KP NV+ +  E+ K                         +++ID+G   +
Sbjct: 148 HSMGIMHRDVKPHNVM-IDHEHRK-------------------------LRLIDWGLAEF 181
Query: 66  ERPDQNYIV--STRHYRAPEVILGLG-WTYPCDIWSVGCILVELC-TGEALFQTHENLEH 121
             P Q Y V  ++R+++ PE+++    + Y  D+WS+GC+L  +    E  F  H+N + 
Sbjct: 182 YHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQ 241
Query: 122 LAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVPFFYG 181
           L  + +VLG   + +   +D++                       ++   PR        
Sbjct: 242 LVRIAKVLG--TEDLYDYIDKY-----------------------NIELDPR-------- 268
Query: 182 SFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALR 241
            F +  G     R    + S  Q+L+       + +    L  LLRYD   RLTAREA+ 
Sbjct: 269 -FNDILGRHSRKRWERFVHSENQHLV-------SPEALDFLDKLLRYDHQSRLTAREAME 320
Query: 242 HPFF 245
           HP+F
Sbjct: 321 HPYF 324

>pdb|4DGL|C Chain C, Crystal Structure Of The Ck2 Tetrameric Holoenzyme Length = 335

Iteration: 1
 Score = 66.2 bits (160), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 59/244 (24%), Positives = 103/244 (42%), Gaps = 71/244 (29%)
Query: 6   HDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTY 65
           H + ++H D+KP NV+ +  E+ K                         +++ID+G   +
Sbjct: 148 HSMGIMHRDVKPHNVM-IDHEHRK-------------------------LRLIDWGLAEF 181
Query: 66  ERPDQNYIV--STRHYRAPEVILGLG-WTYPCDIWSVGCILVELC-TGEALFQTHENLEH 121
             P Q Y V  ++R+++ PE+++    + Y  D+WS+GC+L  +    E  F  H+N + 
Sbjct: 182 YHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQ 241
Query: 122 LAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVPFFYG 181
           L  + +VLG   + +   +D++                       ++   PR        
Sbjct: 242 LVRIAKVLG--TEDLYDYIDKY-----------------------NIELDPR-------- 268
Query: 182 SFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALR 241
            F +  G     R    + S  Q+L+       + +    L  LLRYD   RLTAREA+ 
Sbjct: 269 -FNDILGRHSRKRWERFVHSENQHLV-------SPEALDFLDKLLRYDHQSRLTAREAME 320
Query: 242 HPFF 245
           HP+F
Sbjct: 321 HPYF 324

>pdb|2ZJW|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With Ellagic Acid Length = 340

Iteration: 1
 Score = 66.2 bits (160), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 59/244 (24%), Positives = 103/244 (42%), Gaps = 71/244 (29%)
Query: 6   HDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTY 65
           H + ++H D+KP NV+ +  E+ K                         +++ID+G   +
Sbjct: 153 HSMGIMHRDVKPHNVM-IDHEHRK-------------------------LRLIDWGLAEF 186
Query: 66  ERPDQNYIV--STRHYRAPEVILGLG-WTYPCDIWSVGCILVELC-TGEALFQTHENLEH 121
             P Q Y V  ++R+++ PE+++    + Y  D+WS+GC+L  +    E  F  H+N + 
Sbjct: 187 YHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQ 246
Query: 122 LAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVPFFYG 181
           L  + +VLG   + +   +D++                       ++   PR        
Sbjct: 247 LVRIAKVLG--TEDLYDYIDKY-----------------------NIELDPR-------- 273
Query: 182 SFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALR 241
            F +  G     R    + S  Q+L+       + +    L  LLRYD   RLTAREA+ 
Sbjct: 274 -FNDILGRHSRKRWERFVHSENQHLV-------SPEALDFLDKLLRYDHQSRLTAREAME 325
Query: 242 HPFF 245
           HP+F
Sbjct: 326 HPYF 329

>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective Gsk-3 Inhibitors Length = 367

Iteration: 1
 Score = 66.2 bits (160), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 41/133 (30%), Positives = 63/133 (47%), Gaps = 31/133 (23%)
Query: 2   FAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG 61
            A +H   + H D+KP+N+LL                           P ++ +K+ DFG
Sbjct: 143 LAYIHSFGICHRDIKPQNLLL--------------------------DPDTAVLKLCDFG 176
Query: 62  ST---TYERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHE 117
           S        P+ + I S R+YRAPE+I G   +T   D+WS GC+L EL  G+ +F    
Sbjct: 177 SAKQLVRGEPNVSXICS-RYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDS 235
Query: 118 NLEHLAMMERVLG 130
            ++ L  + +VLG
Sbjct: 236 GVDQLVEIIKVLG 248

>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk Docking Peptide Length = 362

Iteration: 1
 Score = 66.2 bits (160), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 62/250 (24%), Positives = 99/250 (39%), Gaps = 81/250 (32%)
Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           +H   ++H DLKP N+LL ++                           S +K+ DFG   
Sbjct: 142 IHSANVLHRDLKPSNLLLNTT---------------------------SDLKICDFGLAR 174
Query: 65  YERPDQNYI------VSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHE 117
              PD ++       V+TR YRAPE++L   G+T   DIWSVGCIL E+ +   +F    
Sbjct: 175 VADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 234
Query: 118 NLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVP 177
            L+ L     +LG L                         G+ S+E +            
Sbjct: 235 YLDQL---NHILGIL-------------------------GSPSQEDLNC---------- 256
Query: 178 FFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAR 237
              G  ++ + Y L+    + +     N +  + D  A D   LL  +L ++P  R+   
Sbjct: 257 ---GINLKARNYLLSLPHKNKVP---WNRLFPNADSKALD---LLDKMLTFNPHKRIEVE 307
Query: 238 EALRHPFFTR 247
           +AL HP+  +
Sbjct: 308 QALAHPYLAQ 317

>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With Frattide Peptide Length = 378

Iteration: 1
 Score = 66.2 bits (160), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 41/133 (30%), Positives = 63/133 (47%), Gaps = 31/133 (23%)
Query: 2   FAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG 61
            A +H   + H D+KP+N+LL                           P ++ +K+ DFG
Sbjct: 154 LAYIHSFGICHRDIKPQNLLL--------------------------DPDTAVLKLCDFG 187
Query: 62  ST---TYERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHE 117
           S        P+ + I S R+YRAPE+I G   +T   D+WS GC+L EL  G+ +F    
Sbjct: 188 SAKQLVRGEPNVSXICS-RYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDS 246
Query: 118 NLEHLAMMERVLG 130
            ++ L  + +VLG
Sbjct: 247 GVDQLVEIIKVLG 259

>pdb|2R7I|A Chain A, Crystal Structure Of Catalytic Subunit Of Protein Kinase Ck2 Length = 335

Iteration: 1
 Score = 66.2 bits (160), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 59/244 (24%), Positives = 103/244 (42%), Gaps = 71/244 (29%)
Query: 6   HDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTY 65
           H + ++H D+KP NV+ +  E+ K                         +++ID+G   +
Sbjct: 148 HSMGIMHRDVKPHNVM-IDHEHRK-------------------------LRLIDWGLAEF 181
Query: 66  ERPDQNYIV--STRHYRAPEVILGLG-WTYPCDIWSVGCILVELC-TGEALFQTHENLEH 121
             P Q Y V  ++R+++ PE+++    + Y  D+WS+GC+L  +    E  F  H+N + 
Sbjct: 182 YHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQ 241
Query: 122 LAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVPFFYG 181
           L  + +VLG   + +   +D++                       ++   PR        
Sbjct: 242 LVRIAKVLG--TEDLYDYIDKY-----------------------NIELDPR-------- 268
Query: 182 SFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALR 241
            F +  G     R    + S  Q+L+       + +    L  LLRYD   RLTAREA+ 
Sbjct: 269 -FNDILGRHSRKRWERFVHSENQHLV-------SPEALDFLDKLLRYDHQSRLTAREAME 320
Query: 242 HPFF 245
           HP+F
Sbjct: 321 HPYF 324

>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor Length = 364

Iteration: 1
 Score = 66.2 bits (160), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 61/250 (24%), Positives = 99/250 (39%), Gaps = 81/250 (32%)
Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           +H   ++H DLKP N+LL ++                             +K+ DFG   
Sbjct: 144 IHSANVLHRDLKPSNLLLNTT---------------------------XDLKICDFGLAR 176
Query: 65  YERPDQNYI------VSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHE 117
              PD ++       V+TR YRAPE++L   G+T   DIWSVGCIL E+ +   +F    
Sbjct: 177 VADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 236
Query: 118 NLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVP 177
            L+ L     +LG L                         G+ S+E +  ++ L      
Sbjct: 237 YLDQL---NHILGIL-------------------------GSPSQEDLNCIINL------ 262
Query: 178 FFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAR 237
                  + + Y L+    + +     N +  + D  A D   LL  +L ++P  R+   
Sbjct: 263 -------KARNYLLSLPHKNKVP---WNRLFPNADSKALD---LLDKMLTFNPHKRIEVE 309
Query: 238 EALRHPFFTR 247
           +AL HP+  +
Sbjct: 310 QALAHPYLEQ 319

>pdb|3H30|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D- Ribofuranosylbenzimidazole Length = 334

Iteration: 1
 Score = 66.2 bits (160), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 59/244 (24%), Positives = 103/244 (42%), Gaps = 71/244 (29%)
Query: 6   HDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTY 65
           H + ++H D+KP NV+ +  E+ K                         +++ID+G   +
Sbjct: 148 HSMGIMHRDVKPHNVM-IDHEHRK-------------------------LRLIDWGLAEF 181
Query: 66  ERPDQNYIV--STRHYRAPEVILGLG-WTYPCDIWSVGCILVELC-TGEALFQTHENLEH 121
             P Q Y V  ++R+++ PE+++    + Y  D+WS+GC+L  +    E  F  H+N + 
Sbjct: 182 YHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQ 241
Query: 122 LAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVPFFYG 181
           L  + +VLG   + +   +D++                       ++   PR        
Sbjct: 242 LVRIAKVLG--TEDLYDYIDKY-----------------------NIELDPR-------- 268
Query: 182 SFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALR 241
            F +  G     R    + S  Q+L+       + +    L  LLRYD   RLTAREA+ 
Sbjct: 269 -FNDILGRHSRKRWERFVHSENQHLV-------SPEALDFLDKLLRYDHQSRLTAREAME 320
Query: 242 HPFF 245
           HP+F
Sbjct: 321 HPYF 324

>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed With A Specific Inhibitor Of Human P38 Map Kinase Length = 380

Iteration: 1
 Score = 66.2 bits (160), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 61/250 (24%), Positives = 99/250 (39%), Gaps = 81/250 (32%)
Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           +H   ++H DLKP N+LL ++                             +K+ DFG   
Sbjct: 160 IHSANVLHRDLKPSNLLLNTT---------------------------XDLKICDFGLAR 192
Query: 65  YERPDQNYI------VSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHE 117
              PD ++       V+TR YRAPE++L   G+T   DIWSVGCIL E+ +   +F    
Sbjct: 193 VADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 252
Query: 118 NLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVP 177
            L+ L     +LG L                         G+ S+E +  ++ L      
Sbjct: 253 YLDQL---NHILGIL-------------------------GSPSQEDLNCIINL------ 278
Query: 178 FFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAR 237
                  + + Y L+    + +     N +  + D  A D   LL  +L ++P  R+   
Sbjct: 279 -------KARNYLLSLPHKNKVP---WNRLFPNADSKALD---LLDKMLTFNPHKRIEVE 325
Query: 238 EALRHPFFTR 247
           +AL HP+  +
Sbjct: 326 QALAHPYLEQ 335

>pdb|1PJK|A Chain A, Crystal Structure Of A C-terminal Deletion Mutant Of Human Protein Kinase Ck2 Catalytic Subunit Length = 334

Iteration: 1
 Score = 66.2 bits (160), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 59/244 (24%), Positives = 103/244 (42%), Gaps = 71/244 (29%)
Query: 6   HDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTY 65
           H + ++H D+KP NV+ +  E+ K                         +++ID+G   +
Sbjct: 147 HSMGIMHRDVKPHNVM-IDHEHRK-------------------------LRLIDWGLAEF 180
Query: 66  ERPDQNYIV--STRHYRAPEVILGLG-WTYPCDIWSVGCILVELC-TGEALFQTHENLEH 121
             P Q Y V  ++R+++ PE+++    + Y  D+WS+GC+L  +    E  F  H+N + 
Sbjct: 181 YHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQ 240
Query: 122 LAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVPFFYG 181
           L  + +VLG   + +   +D++                       ++   PR        
Sbjct: 241 LVRIAKVLG--TEDLYDYIDKY-----------------------NIELDPR-------- 267
Query: 182 SFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALR 241
            F +  G     R    + S  Q+L+       + +    L  LLRYD   RLTAREA+ 
Sbjct: 268 -FNDILGRHSRKRWERFVHSENQHLV-------SPEALDFLDKLLRYDHQSRLTAREAME 319
Query: 242 HPFF 245
           HP+F
Sbjct: 320 HPYF 323

>pdb|3MB6|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane Derivative Inhibitor (Cpa) Length = 331

Iteration: 1
 Score = 66.2 bits (160), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 59/244 (24%), Positives = 103/244 (42%), Gaps = 71/244 (29%)
Query: 6   HDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTY 65
           H + ++H D+KP NV+ +  E+ K                         +++ID+G   +
Sbjct: 148 HSMGIMHRDVKPHNVM-IDHEHRK-------------------------LRLIDWGLAEF 181
Query: 66  ERPDQNYIV--STRHYRAPEVILGLG-WTYPCDIWSVGCILVELC-TGEALFQTHENLEH 121
             P Q Y V  ++R+++ PE+++    + Y  D+WS+GC+L  +    E  F  H+N + 
Sbjct: 182 YHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQ 241
Query: 122 LAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVPFFYG 181
           L  + +VLG   + +   +D++                       ++   PR        
Sbjct: 242 LVRIAKVLG--TEDLYDYIDKY-----------------------NIELDPR-------- 268
Query: 182 SFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALR 241
            F +  G     R    + S  Q+L+       + +    L  LLRYD   RLTAREA+ 
Sbjct: 269 -FNDILGRHSRKRWERFVHSENQHLV-------SPEALDFLDKLLRYDHQSRLTAREAME 320
Query: 242 HPFF 245
           HP+F
Sbjct: 321 HPYF 324

>pdb|3BQC|A Chain A, High Ph-Value Crystal Structure Of Emodin In Complex With The Catalytic Subunit Of Protein Kinase Ck2 Length = 335

Iteration: 1
 Score = 66.2 bits (160), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 59/244 (24%), Positives = 103/244 (42%), Gaps = 71/244 (29%)
Query: 6   HDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTY 65
           H + ++H D+KP NV+ +  E+ K                         +++ID+G   +
Sbjct: 148 HSMGIMHRDVKPHNVM-IDHEHRK-------------------------LRLIDWGLAEF 181
Query: 66  ERPDQNYIV--STRHYRAPEVILGLG-WTYPCDIWSVGCILVELC-TGEALFQTHENLEH 121
             P Q Y V  ++R+++ PE+++    + Y  D+WS+GC+L  +    E  F  H+N + 
Sbjct: 182 YHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQ 241
Query: 122 LAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVPFFYG 181
           L  + +VLG   + +   +D++                       ++   PR        
Sbjct: 242 LVRIAKVLG--TEDLYDYIDKY-----------------------NIELDPR-------- 268
Query: 182 SFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALR 241
            F +  G     R    + S  Q+L+       + +    L  LLRYD   RLTAREA+ 
Sbjct: 269 -FNDILGRHSRKRWERFVHSENQHLV-------SPEALDFLDKLLRYDHQSRLTAREAME 320
Query: 242 HPFF 245
           HP+F
Sbjct: 321 HPYF 324

>pdb|3Q9W|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With Emodin At Ph 8.5 Length = 336

Iteration: 1
 Score = 66.2 bits (160), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 59/244 (24%), Positives = 103/244 (42%), Gaps = 71/244 (29%)
Query: 6   HDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTY 65
           H + ++H D+KP NV+ +  E+ K                         +++ID+G   +
Sbjct: 148 HSMGIMHRDVKPHNVM-IDHEHRK-------------------------LRLIDWGLAEF 181
Query: 66  ERPDQNYIV--STRHYRAPEVILGLG-WTYPCDIWSVGCILVELC-TGEALFQTHENLEH 121
             P Q Y V  ++R+++ PE+++    + Y  D+WS+GC+L  +    E  F  H+N + 
Sbjct: 182 YHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQ 241
Query: 122 LAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVPFFYG 181
           L  + +VLG   + +   +D++                       ++   PR        
Sbjct: 242 LVRIAKVLG--TEDLYDYIDKY-----------------------NIELDPR-------- 268
Query: 182 SFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALR 241
            F +  G     R    + S  Q+L+       + +    L  LLRYD   RLTAREA+ 
Sbjct: 269 -FNDILGRHSRKRWERFVHSENQHLV-------SPEALDFLDKLLRYDHQSRLTAREAME 320
Query: 242 HPFF 245
           HP+F
Sbjct: 321 HPYF 324

>pdb|1NA7|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human Protein Kinase Ck2 Length = 329

Iteration: 1
 Score = 66.2 bits (160), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 59/244 (24%), Positives = 103/244 (42%), Gaps = 71/244 (29%)
Query: 6   HDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTY 65
           H + ++H D+KP NV+ +  E+ K                         +++ID+G   +
Sbjct: 148 HSMGIMHRDVKPHNVM-IDHEHRK-------------------------LRLIDWGLAEF 181
Query: 66  ERPDQNYIV--STRHYRAPEVILGLG-WTYPCDIWSVGCILVELC-TGEALFQTHENLEH 121
             P Q Y V  ++R+++ PE+++    + Y  D+WS+GC+L  +    E  F  H+N + 
Sbjct: 182 YHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQ 241
Query: 122 LAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVPFFYG 181
           L  + +VLG   + +   +D++                       ++   PR        
Sbjct: 242 LVRIAKVLG--TEDLYDYIDKY-----------------------NIELDPR-------- 268
Query: 182 SFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALR 241
            F +  G     R    + S  Q+L+       + +    L  LLRYD   RLTAREA+ 
Sbjct: 269 -FNDILGRHSRKRWERFVHSENQHLV-------SPEALDFLDKLLRYDHQSRLTAREAME 320
Query: 242 HPFF 245
           HP+F
Sbjct: 321 HPYF 324

>pdb|3NSZ|A Chain A, Human Ck2 Catalytic Domain In Complex With Amppn Length = 330

Iteration: 1
 Score = 66.2 bits (160), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 59/244 (24%), Positives = 103/244 (42%), Gaps = 71/244 (29%)
Query: 6   HDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTY 65
           H + ++H D+KP NV+ +  E+ K                         +++ID+G   +
Sbjct: 147 HSMGIMHRDVKPHNVM-IDHEHRK-------------------------LRLIDWGLAEF 180
Query: 66  ERPDQNYIV--STRHYRAPEVILGLG-WTYPCDIWSVGCILVELC-TGEALFQTHENLEH 121
             P Q Y V  ++R+++ PE+++    + Y  D+WS+GC+L  +    E  F  H+N + 
Sbjct: 181 YHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQ 240
Query: 122 LAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVPFFYG 181
           L  + +VLG   + +   +D++                       ++   PR        
Sbjct: 241 LVRIAKVLG--TEDLYDYIDKY-----------------------NIELDPR-------- 267
Query: 182 SFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALR 241
            F +  G     R    + S  Q+L+       + +    L  LLRYD   RLTAREA+ 
Sbjct: 268 -FNDILGRHSRKRWERFVHSENQHLV-------SPEALDFLDKLLRYDHQSRLTAREAME 319
Query: 242 HPFF 245
           HP+F
Sbjct: 320 HPYF 323

>pdb|3Q04|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph 8.5 Length = 328

Iteration: 1
 Score = 66.2 bits (160), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 59/244 (24%), Positives = 103/244 (42%), Gaps = 71/244 (29%)
Query: 6   HDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTY 65
           H + ++H D+KP NV+ +  E+ K                         +++ID+G   +
Sbjct: 146 HSMGIMHRDVKPHNVM-IDHEHRK-------------------------LRLIDWGLAEF 179
Query: 66  ERPDQNYIV--STRHYRAPEVILGLG-WTYPCDIWSVGCILVELC-TGEALFQTHENLEH 121
             P Q Y V  ++R+++ PE+++    + Y  D+WS+GC+L  +    E  F  H+N + 
Sbjct: 180 YHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQ 239
Query: 122 LAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVPFFYG 181
           L  + +VLG   + +   +D++                       ++   PR        
Sbjct: 240 LVRIAKVLG--TEDLYDYIDKY-----------------------NIELDPR-------- 266
Query: 182 SFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALR 241
            F +  G     R    + S  Q+L+       + +    L  LLRYD   RLTAREA+ 
Sbjct: 267 -FNDILGRHSRKRWERFVHSENQHLV-------SPEALDFLDKLLRYDHQSRLTAREAME 318
Query: 242 HPFF 245
           HP+F
Sbjct: 319 HPYF 322

>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors Length = 370

Iteration: 1
 Score = 66.2 bits (160), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 60/243 (24%), Positives = 100/243 (41%), Gaps = 63/243 (25%)
Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           +H   +IH DLKP N+++ S   +K+ D+  +                        G++ 
Sbjct: 142 LHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTA---------------------GTSF 180
Query: 65  YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHL-A 123
              P+    V TR+YRAPEVILG+G+    D+WSVGCI+ E+   + LF   + ++    
Sbjct: 181 MMEPE----VVTRYYRAPEVILGMGYKENVDLWSVGCIMGEMVCHKILFPGRDYIDQWNK 236
Query: 124 MMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVPFFYGSF 183
           ++E++  P P+ M K++      YV                       P+          
Sbjct: 237 VIEQLGTPCPEFM-KKLQPTVRTYVENR--------------------PK---------- 265
Query: 184 VEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHP 243
             + GY       D +  F  +   +H    A     LL  +L  D + R++  EAL+HP
Sbjct: 266 --YAGYSFEKLFPDVL--FPAD--SEHNKLKASQARDLLSKMLVIDASKRISVDEALQHP 319
Query: 244 FFT 246
           +  
Sbjct: 320 YIN 322

>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk Docking Peptide Length = 362

Iteration: 1
 Score = 66.2 bits (160), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 61/250 (24%), Positives = 99/250 (39%), Gaps = 81/250 (32%)
Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           +H   ++H DLKP N+LL ++                             +K+ DFG   
Sbjct: 142 IHSANVLHRDLKPSNLLLNTT---------------------------CDLKICDFGLAR 174
Query: 65  YERPDQNYI------VSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHE 117
              PD ++       V+TR YRAPE++L   G+T   DIWSVGCIL E+ +   +F    
Sbjct: 175 VADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 234
Query: 118 NLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVP 177
            L+ L     +LG L                         G+ S+E +  ++ L      
Sbjct: 235 YLDQL---NHILGIL-------------------------GSPSQEDLNCIINL------ 260
Query: 178 FFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAR 237
                  + + Y L+    + +     N +  + D  A D   LL  +L ++P  R+   
Sbjct: 261 -------KARNYLLSLPHKNKVP---WNRLFPNADSKALD---LLDKMLTFNPHKRIEVE 307
Query: 238 EALRHPFFTR 247
           +AL HP+  +
Sbjct: 308 QALAHPYLAQ 317

>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex Length = 353

Iteration: 1
 Score = 66.2 bits (160), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 41/133 (30%), Positives = 63/133 (47%), Gaps = 31/133 (23%)
Query: 2   FAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG 61
            A +H   + H D+KP+N+LL                           P ++ +K+ DFG
Sbjct: 139 LAYIHSFGICHRDIKPQNLLL--------------------------DPDTAVLKLCDFG 172
Query: 62  ST---TYERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHE 117
           S        P+ + I S R+YRAPE+I G   +T   D+WS GC+L EL  G+ +F    
Sbjct: 173 SAKQLVRGEPNVSXICS-RYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDS 231
Query: 118 NLEHLAMMERVLG 130
            ++ L  + +VLG
Sbjct: 232 GVDQLVEIIKVLG 244

>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin Peptide Length = 350

Iteration: 1
 Score = 66.2 bits (160), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 41/133 (30%), Positives = 63/133 (47%), Gaps = 31/133 (23%)
Query: 2   FAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG 61
            A +H   + H D+KP+N+LL                           P ++ +K+ DFG
Sbjct: 135 LAYIHSFGICHRDIKPQNLLL--------------------------DPDTAVLKLCDFG 168
Query: 62  ST---TYERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHE 117
           S        P+ + I S R+YRAPE+I G   +T   D+WS GC+L EL  G+ +F    
Sbjct: 169 SAKQLVRGEPNVSXICS-RYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDS 227
Query: 118 NLEHLAMMERVLG 130
            ++ L  + +VLG
Sbjct: 228 GVDQLVEIIKVLG 240

>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis- (Indole)maleimide Pyridinophane Inhibitor Length = 352

Iteration: 1
 Score = 66.2 bits (160), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 41/133 (30%), Positives = 63/133 (47%), Gaps = 31/133 (23%)
Query: 2   FAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG 61
            A +H   + H D+KP+N+LL                           P ++ +K+ DFG
Sbjct: 135 LAYIHSFGICHRDIKPQNLLL--------------------------DPDTAVLKLCDFG 168
Query: 62  ST---TYERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHE 117
           S        P+ + I S R+YRAPE+I G   +T   D+WS GC+L EL  G+ +F    
Sbjct: 169 SAKQLVRGEPNVSXICS-RYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDS 227
Query: 118 NLEHLAMMERVLG 130
            ++ L  + +VLG
Sbjct: 228 GVDQLVEIIKVLG 240

>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex Length = 349

Iteration: 1
 Score = 66.2 bits (160), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 41/133 (30%), Positives = 63/133 (47%), Gaps = 31/133 (23%)
Query: 2   FAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG 61
            A +H   + H D+KP+N+LL                           P ++ +K+ DFG
Sbjct: 135 LAYIHSFGICHRDIKPQNLLL--------------------------DPDTAVLKLCDFG 168
Query: 62  ST---TYERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHE 117
           S        P+ + I S R+YRAPE+I G   +T   D+WS GC+L EL  G+ +F    
Sbjct: 169 SAKQLVRGEPNVSXICS-RYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDS 227
Query: 118 NLEHLAMMERVLG 130
            ++ L  + +VLG
Sbjct: 228 GVDQLVEIIKVLG 240

>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase 3beta In Complex With An Inhibitor Length = 350

Iteration: 1
 Score = 66.2 bits (160), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 41/133 (30%), Positives = 63/133 (47%), Gaps = 31/133 (23%)
Query: 2   FAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG 61
            A +H   + H D+KP+N+LL                           P ++ +K+ DFG
Sbjct: 136 LAYIHSFGICHRDIKPQNLLL--------------------------DPDTAVLKLCDFG 169
Query: 62  ST---TYERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHE 117
           S        P+ + I S R+YRAPE+I G   +T   D+WS GC+L EL  G+ +F    
Sbjct: 170 SAKQLVRGEPNVSXICS-RYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDS 228
Query: 118 NLEHLAMMERVLG 130
            ++ L  + +VLG
Sbjct: 229 GVDQLVEIIKVLG 241

>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin Peptide And Inhibitor 7d Length = 350

Iteration: 1
 Score = 65.9 bits (159), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 41/133 (30%), Positives = 63/133 (47%), Gaps = 31/133 (23%)
Query: 2   FAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG 61
            A +H   + H D+KP+N+LL                           P ++ +K+ DFG
Sbjct: 135 LAYIHSFGICHRDIKPQNLLL--------------------------DPDTAVLKLCDFG 168
Query: 62  ST---TYERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHE 117
           S        P+ + I S R+YRAPE+I G   +T   D+WS GC+L EL  G+ +F    
Sbjct: 169 SAKQLVRGEPNVSXICS-RYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDS 227
Query: 118 NLEHLAMMERVLG 130
            ++ L  + +VLG
Sbjct: 228 GVDQLVEIIKVLG 240

>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57 Length = 360

Iteration: 1
 Score = 65.9 bits (159), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 61/250 (24%), Positives = 99/250 (39%), Gaps = 81/250 (32%)
Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           +H   ++H DLKP N+LL ++                             +K+ DFG   
Sbjct: 140 IHSANVLHRDLKPSNLLLNTT---------------------------CDLKICDFGLAR 172
Query: 65  YERPDQNYI------VSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHE 117
              PD ++       V+TR YRAPE++L   G+T   DIWSVGCIL E+ +   +F    
Sbjct: 173 VADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 232
Query: 118 NLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVP 177
            L+ L     +LG L                         G+ S+E +  ++ L      
Sbjct: 233 YLDQL---NHILGIL-------------------------GSPSQEDLNCIINL------ 258
Query: 178 FFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAR 237
                  + + Y L+    + +     N +  + D  A D   LL  +L ++P  R+   
Sbjct: 259 -------KARNYLLSLPHKNKVP---WNRLFPNADSKALD---LLDKMLTFNPHKRIEVE 305
Query: 238 EALRHPFFTR 247
           +AL HP+  +
Sbjct: 306 QALAHPYLEQ 315

>pdb|3U87|A Chain A, Structure Of A Chimeric Construct Of Human Ck2alpha And Human Ck2alpha' In Complex With A Non-hydrolysable Atp-analogue Length = 349

Iteration: 1
 Score = 65.9 bits (159), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 59/244 (24%), Positives = 103/244 (42%), Gaps = 71/244 (29%)
Query: 6   HDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTY 65
           H + ++H D+KP NV+ +  E+ K                         +++ID+G   +
Sbjct: 148 HSMGIMHRDVKPHNVM-IDHEHRK-------------------------LRLIDWGLAEF 181
Query: 66  ERPDQNYIV--STRHYRAPEVILGLG-WTYPCDIWSVGCILVELC-TGEALFQTHENLEH 121
             P Q Y V  ++R+++ PE+++    + Y  D+WS+GC+L  +    E  F  H+N + 
Sbjct: 182 YHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQ 241
Query: 122 LAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVPFFYG 181
           L  + +VLG   + +   +D++                       ++   PR        
Sbjct: 242 LVRIAKVLG--TEDLYDYIDKY-----------------------NIELDPR-------- 268
Query: 182 SFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALR 241
            F +  G     R    + S  Q+L+       + +    L  LLRYD   RLTAREA+ 
Sbjct: 269 -FNDILGRHSRKRWERFVHSENQHLV-------SPEALDFLDKLLRYDHQSRLTAREAME 320
Query: 242 HPFF 245
           HP+F
Sbjct: 321 HPYF 324

>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk Docking Peptide Length = 362

Iteration: 1
 Score = 65.9 bits (159), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 61/250 (24%), Positives = 99/250 (39%), Gaps = 81/250 (32%)
Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           +H   ++H DLKP N+LL ++                             +K+ DFG   
Sbjct: 142 IHSANVLHRDLKPSNLLLNTT---------------------------CDLKICDFGLAR 174
Query: 65  YERPDQNYI------VSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHE 117
              PD ++       V+TR YRAPE++L   G+T   DIWSVGCIL E+ +   +F    
Sbjct: 175 VADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 234
Query: 118 NLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVP 177
            L+ L     +LG L                         G+ S+E +  ++ L      
Sbjct: 235 YLDQL---NHILGIL-------------------------GSPSQEDLNCIINL------ 260
Query: 178 FFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAR 237
                  + + Y L+    + +     N +  + D  A D   LL  +L ++P  R+   
Sbjct: 261 -------KARNYLLSLPHKNKVP---WNRLFPNADSKALD---LLDKMLTFNPHKRIEVE 307
Query: 238 EALRHPFFTR 247
           +AL HP+  +
Sbjct: 308 QALAHPYLEQ 317

>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With N,n-dimethyl-4-(4- Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide Length = 380

Iteration: 1
 Score = 65.9 bits (159), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 61/250 (24%), Positives = 99/250 (39%), Gaps = 81/250 (32%)
Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           +H   ++H DLKP N+LL ++                             +K+ DFG   
Sbjct: 160 IHSANVLHRDLKPSNLLLNTT---------------------------CDLKICDFGLAR 192
Query: 65  YERPDQNYI------VSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHE 117
              PD ++       V+TR YRAPE++L   G+T   DIWSVGCIL E+ +   +F    
Sbjct: 193 VADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 252
Query: 118 NLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVP 177
            L+ L     +LG L                         G+ S+E +  ++ L      
Sbjct: 253 YLDQL---NHILGIL-------------------------GSPSQEDLNCIINL------ 278
Query: 178 FFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAR 237
                  + + Y L+    + +     N +  + D  A D   LL  +L ++P  R+   
Sbjct: 279 -------KARNYLLSLPHKNKVP---WNRLFPNADSKALD---LLDKMLTFNPHKRIEVE 325
Query: 238 EALRHPFFTR 247
           +AL HP+  +
Sbjct: 326 QALAHPYLEQ 335

>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major Length = 360

Iteration: 1
 Score = 65.9 bits (159), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 64/241 (26%), Positives = 92/241 (38%), Gaps = 75/241 (31%)
Query: 12  HTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQN 71
           H D+KP NVL+  ++                            +K+ DFGS     P + 
Sbjct: 154 HRDIKPHNVLVNEAD--------------------------GTLKLCDFGSAKKLSPSEP 187
Query: 72  YI--VSTRHYRAPEVILGLG-WTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERV 128
            +  + +R+YRAPE+I G   +T   DIWSVGCI  E+  GE +F+   +   L  + RV
Sbjct: 188 NVAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSAGQLHEIVRV 247
Query: 129 LGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVPFFYGSFVEFKG 188
           LG                              SRE ++ +   P       Y S    KG
Sbjct: 248 LG----------------------------CPSREVLRKLN--PSHTDVDLYNS----KG 273
Query: 189 YCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRD 248
              +            N+   H    A +   LL  LL+Y P +R+   EAL HP+F   
Sbjct: 274 IPWS------------NVFSDHSLKDAKEAYDLLSALLQYLPEERMKPYEALCHPYFDEL 321
Query: 249 H 249
           H
Sbjct: 322 H 322

>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat Protein In Complex With The Phosphorylated Map Kinase Erk2 Length = 364

Iteration: 1
 Score = 65.9 bits (159), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 61/250 (24%), Positives = 99/250 (39%), Gaps = 81/250 (32%)
Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           +H   ++H DLKP N+LL ++                             +K+ DFG   
Sbjct: 144 IHSANVLHRDLKPSNLLLNTT---------------------------CDLKICDFGLAR 176
Query: 65  YERPDQNYI------VSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHE 117
              PD ++       V+TR YRAPE++L   G+T   DIWSVGCIL E+ +   +F    
Sbjct: 177 VADPDHDHTGFLXEXVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 236
Query: 118 NLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVP 177
            L+ L     +LG L                         G+ S+E +  ++ L      
Sbjct: 237 YLDQL---NHILGIL-------------------------GSPSQEDLNCIINL------ 262
Query: 178 FFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAR 237
                  + + Y L+    + +     N +  + D  A D   LL  +L ++P  R+   
Sbjct: 263 -------KARNYLLSLPHKNKVP---WNRLFPNADSKALD---LLDKMLTFNPHKRIEVE 309
Query: 238 EALRHPFFTR 247
           +AL HP+  +
Sbjct: 310 QALAHPYLEQ 319

>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2 Length = 365

Iteration: 1
 Score = 65.9 bits (159), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 61/250 (24%), Positives = 99/250 (39%), Gaps = 81/250 (32%)
Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           +H   ++H DLKP N+LL ++                             +K+ DFG   
Sbjct: 145 IHSANVLHRDLKPSNLLLNTT---------------------------CDLKICDFGLAR 177
Query: 65  YERPDQNYI------VSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHE 117
              PD ++       V+TR YRAPE++L   G+T   DIWSVGCIL E+ +   +F    
Sbjct: 178 VADPDHDHTGFLXEXVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 237
Query: 118 NLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVP 177
            L+ L     +LG L                         G+ S+E +  ++ L      
Sbjct: 238 YLDQL---NHILGIL-------------------------GSPSQEDLNCIINL------ 263
Query: 178 FFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAR 237
                  + + Y L+    + +     N +  + D  A D   LL  +L ++P  R+   
Sbjct: 264 -------KARNYLLSLPHKNKVP---WNRLFPNADSKALD---LLDKMLTFNPHKRIEVE 310
Query: 238 EALRHPFFTR 247
           +AL HP+  +
Sbjct: 311 QALAHPYLEQ 320

>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX Length = 358

Iteration: 1
 Score = 65.9 bits (159), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 61/250 (24%), Positives = 99/250 (39%), Gaps = 81/250 (32%)
Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           +H   ++H DLKP N+LL ++                             +K+ DFG   
Sbjct: 138 IHSANVLHRDLKPSNLLLNTT---------------------------CDLKICDFGLAR 170
Query: 65  YERPDQNYI------VSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHE 117
              PD ++       V+TR YRAPE++L   G+T   DIWSVGCIL E+ +   +F    
Sbjct: 171 VADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 230
Query: 118 NLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVP 177
            L+ L     +LG L                         G+ S+E +  ++ L      
Sbjct: 231 YLDQL---NHILGIL-------------------------GSPSQEDLNCIINL------ 256
Query: 178 FFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAR 237
                  + + Y L+    + +     N +  + D  A D   LL  +L ++P  R+   
Sbjct: 257 -------KARNYLLSLPHKNKVP---WNRLFPNADSKALD---LLDKMLTFNPHKRIEVE 303
Query: 238 EALRHPFFTR 247
           +AL HP+  +
Sbjct: 304 QALAHPYLEQ 313

>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine Mutation At Position 52 Length = 364

Iteration: 1
 Score = 65.9 bits (159), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 61/250 (24%), Positives = 99/250 (39%), Gaps = 81/250 (32%)
Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           +H   ++H DLKP N+LL ++                             +K+ DFG   
Sbjct: 144 IHSANVLHRDLKPSNLLLNTT---------------------------CDLKICDFGLAR 176
Query: 65  YERPDQNYI------VSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHE 117
              PD ++       V+TR YRAPE++L   G+T   DIWSVGCIL E+ +   +F    
Sbjct: 177 VADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 236
Query: 118 NLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVP 177
            L+ L     +LG L                         G+ S+E +  ++ L      
Sbjct: 237 YLDQL---NHILGIL-------------------------GSPSQEDLNCIINL------ 262
Query: 178 FFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAR 237
                  + + Y L+    + +     N +  + D  A D   LL  +L ++P  R+   
Sbjct: 263 -------KARNYLLSLPHKNKVP---WNRLFPNADSKALD---LLDKMLTFNPHKRIEVE 309
Query: 238 EALRHPFFTR 247
           +AL HP+  +
Sbjct: 310 QALAHPYLEQ 319

>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat Protein In Complex With The Map Kinase Erk2 Length = 365

Iteration: 1
 Score = 65.9 bits (159), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 61/250 (24%), Positives = 99/250 (39%), Gaps = 81/250 (32%)
Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           +H   ++H DLKP N+LL ++                             +K+ DFG   
Sbjct: 145 IHSANVLHRDLKPSNLLLNTT---------------------------CDLKICDFGLAR 177
Query: 65  YERPDQNYI------VSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHE 117
              PD ++       V+TR YRAPE++L   G+T   DIWSVGCIL E+ +   +F    
Sbjct: 178 VADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 237
Query: 118 NLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVP 177
            L+ L     +LG L                         G+ S+E +  ++ L      
Sbjct: 238 YLDQL---NHILGIL-------------------------GSPSQEDLNCIINL------ 263
Query: 178 FFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAR 237
                  + + Y L+    + +     N +  + D  A D   LL  +L ++P  R+   
Sbjct: 264 -------KARNYLLSLPHKNKVP---WNRLFPNADSKALD---LLDKMLTFNPHKRIEVE 310
Query: 238 EALRHPFFTR 247
           +AL HP+  +
Sbjct: 311 QALAHPYLEQ 320

>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In Complex With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin 2-Yl]amino}phenyl)acetic Acid Length = 366

Iteration: 1
 Score = 65.9 bits (159), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 61/250 (24%), Positives = 99/250 (39%), Gaps = 81/250 (32%)
Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           +H   ++H DLKP N+LL ++                             +K+ DFG   
Sbjct: 146 IHSANVLHRDLKPSNLLLNTT---------------------------CDLKICDFGLAR 178
Query: 65  YERPDQNYI------VSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHE 117
              PD ++       V+TR YRAPE++L   G+T   DIWSVGCIL E+ +   +F    
Sbjct: 179 VADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 238
Query: 118 NLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVP 177
            L+ L     +LG L                         G+ S+E +  ++ L      
Sbjct: 239 YLDQL---NHILGIL-------------------------GSPSQEDLNCIINL------ 264
Query: 178 FFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAR 237
                  + + Y L+    + +     N +  + D  A D   LL  +L ++P  R+   
Sbjct: 265 -------KARNYLLSLPHKNKVP---WNRLFPNADSKALD---LLDKMLTFNPHKRIEVE 311
Query: 238 EALRHPFFTR 247
           +AL HP+  +
Sbjct: 312 QALAHPYLEQ 321

>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently Bound Length = 357

Iteration: 1
 Score = 65.9 bits (159), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 61/250 (24%), Positives = 99/250 (39%), Gaps = 81/250 (32%)
Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           +H   ++H DLKP N+LL ++                             +K+ DFG   
Sbjct: 137 IHSANVLHRDLKPSNLLLNTT---------------------------CDLKICDFGLAR 169
Query: 65  YERPDQNYI------VSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHE 117
              PD ++       V+TR YRAPE++L   G+T   DIWSVGCIL E+ +   +F    
Sbjct: 170 VADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 229
Query: 118 NLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVP 177
            L+ L     +LG L                         G+ S+E +  ++ L      
Sbjct: 230 YLDQL---NHILGIL-------------------------GSPSQEDLNCIINL------ 255
Query: 178 FFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAR 237
                  + + Y L+    + +     N +  + D  A D   LL  +L ++P  R+   
Sbjct: 256 -------KARNYLLSLPHKNKVP---WNRLFPNADSKALD---LLDKMLTFNPHKRIEVE 302
Query: 238 EALRHPFFTR 247
           +AL HP+  +
Sbjct: 303 QALAHPYLEQ 312

>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived From Mkp3 Length = 364

Iteration: 1
 Score = 65.9 bits (159), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 61/250 (24%), Positives = 99/250 (39%), Gaps = 81/250 (32%)
Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           +H   ++H DLKP N+LL ++                             +K+ DFG   
Sbjct: 144 IHSANVLHRDLKPSNLLLNTT---------------------------CDLKICDFGLAR 176
Query: 65  YERPDQNYI------VSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHE 117
              PD ++       V+TR YRAPE++L   G+T   DIWSVGCIL E+ +   +F    
Sbjct: 177 VADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 236
Query: 118 NLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVP 177
            L+ L     +LG L                         G+ S+E +  ++ L      
Sbjct: 237 YLDQL---NHILGIL-------------------------GSPSQEDLNCIINL------ 262
Query: 178 FFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAR 237
                  + + Y L+    + +     N +  + D  A D   LL  +L ++P  R+   
Sbjct: 263 -------KARNYLLSLPHKNKVP---WNRLFPNADSKALD---LLDKMLTFNPHKRIEVE 309
Query: 238 EALRHPFFTR 247
           +AL HP+  +
Sbjct: 310 QALAHPYLEQ 319

>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137 Length = 309

Iteration: 1
 Score = 65.5 bits (158), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 67/248 (27%), Positives = 99/248 (39%), Gaps = 80/248 (32%)
Query: 2   FAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG 61
            A  H   ++H DLKP+N LL+++E                           AIK+ DFG
Sbjct: 120 LAFCHSHRVLHRDLKPQN-LLINTE--------------------------GAIKLADFG 152
Query: 62  -STTYERPDQNYI--VSTRHYRAPEVILGLGW-TYPCDIWSVGCILVELCTGEALFQTHE 117
            +  +  P + Y   V T  YRAPE++LG  + +   DIWS+GCI  E+ T  ALF    
Sbjct: 153 LARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDS 212
Query: 118 NLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVP 177
            ++ L  + R LG  P  ++                 WP           V  +P  +  
Sbjct: 213 EIDQLFRIFRTLG-TPDEVV-----------------WP----------GVTSMPDYKPS 244
Query: 178 FFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAR 237
           F   +  +F                    ++  +D    D   LL  +L YDP  R++A+
Sbjct: 245 FPKWARQDFSK------------------VVPPLDE---DGRSLLSQMLHYDPNKRISAK 283
Query: 238 EALRHPFF 245
            AL HPFF
Sbjct: 284 AALAHPFF 291

>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B Length = 289

Iteration: 1
 Score = 65.5 bits (158), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 67/248 (27%), Positives = 99/248 (39%), Gaps = 80/248 (32%)
Query: 2   FAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG 61
            A  H   ++H DLKP+N LL+++E                           AIK+ DFG
Sbjct: 116 LAFCHSHRVLHRDLKPQN-LLINTE--------------------------GAIKLADFG 148
Query: 62  -STTYERPDQNYI--VSTRHYRAPEVILGLGW-TYPCDIWSVGCILVELCTGEALFQTHE 117
            +  +  P + Y   V T  YRAPE++LG  + +   DIWS+GCI  E+ T  ALF    
Sbjct: 149 LARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDS 208
Query: 118 NLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVP 177
            ++ L  + R LG  P  ++                 WP           V  +P  +  
Sbjct: 209 EIDQLFRIFRTLG-TPDEVV-----------------WP----------GVTSMPDYKPS 240
Query: 178 FFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAR 237
           F   +  +F                    ++  +D    D   LL  +L YDP  R++A+
Sbjct: 241 FPKWARQDFSK------------------VVPPLDE---DGRSLLSQMLHYDPNKRISAK 279
Query: 238 EALRHPFF 245
            AL HPFF
Sbjct: 280 AALAHPFF 287

>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Pyrazolopyridazine Derivative Length = 368

Iteration: 1
 Score = 65.5 bits (158), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 61/250 (24%), Positives = 99/250 (39%), Gaps = 81/250 (32%)
Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           +H   ++H DLKP N+LL ++                             +K+ DFG   
Sbjct: 148 IHSANVLHRDLKPSNLLLNTT---------------------------CDLKICDFGLAR 180
Query: 65  YERPDQNYI------VSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHE 117
              PD ++       V+TR YRAPE++L   G+T   DIWSVGCIL E+ +   +F    
Sbjct: 181 VADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 240
Query: 118 NLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVP 177
            L+ L     +LG L                         G+ S+E +  ++ L      
Sbjct: 241 YLDQL---NHILGIL-------------------------GSPSQEDLNCIINL------ 266
Query: 178 FFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAR 237
                  + + Y L+    + +     N +  + D  A D   LL  +L ++P  R+   
Sbjct: 267 -------KARNYLLSLPHKNKVP---WNRLFPNADSKALD---LLDKMLTFNPHKRIEVE 313
Query: 238 EALRHPFFTR 247
           +AL HP+  +
Sbjct: 314 QALAHPYLEQ 323

>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule Inhibitor Length = 368

Iteration: 1
 Score = 65.5 bits (158), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 61/250 (24%), Positives = 99/250 (39%), Gaps = 81/250 (32%)
Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           +H   ++H DLKP N+LL ++                             +K+ DFG   
Sbjct: 140 IHSANVLHRDLKPSNLLLNTT---------------------------CDLKICDFGLAR 172
Query: 65  YERPDQNYI------VSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHE 117
              PD ++       V+TR YRAPE++L   G+T   DIWSVGCIL E+ +   +F    
Sbjct: 173 VADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 232
Query: 118 NLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVP 177
            L+ L     +LG L                         G+ S+E +  ++ L      
Sbjct: 233 YLDQL---NHILGIL-------------------------GSPSQEDLNCIINL------ 258
Query: 178 FFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAR 237
                  + + Y L+    + +     N +  + D  A D   LL  +L ++P  R+   
Sbjct: 259 -------KARNYLLSLPHKNKVP---WNRLFPNADSKALD---LLDKMLTFNPHKRIEVE 305
Query: 238 EALRHPFFTR 247
           +AL HP+  +
Sbjct: 306 QALAHPYLEQ 315

>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site Length = 300

Iteration: 1
 Score = 65.5 bits (158), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 67/248 (27%), Positives = 99/248 (39%), Gaps = 80/248 (32%)
Query: 2   FAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG 61
            A  H   ++H DLKP+N LL+++E                           AIK+ DFG
Sbjct: 117 LAFCHSHRVLHRDLKPQN-LLINTE--------------------------GAIKLADFG 149
Query: 62  -STTYERPDQNYI--VSTRHYRAPEVILGLGW-TYPCDIWSVGCILVELCTGEALFQTHE 117
            +  +  P + Y   V T  YRAPE++LG  + +   DIWS+GCI  E+ T  ALF    
Sbjct: 150 LARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDS 209
Query: 118 NLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVP 177
            ++ L  + R LG  P  ++                 WP           V  +P  +  
Sbjct: 210 EIDQLFRIFRTLG-TPDEVV-----------------WP----------GVTSMPDYKPS 241
Query: 178 FFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAR 237
           F   +  +F                    ++  +D    D   LL  +L YDP  R++A+
Sbjct: 242 FPKWARQDFSK------------------VVPPLDE---DGRSLLSQMLHYDPNKRISAK 280
Query: 238 EALRHPFF 245
            AL HPFF
Sbjct: 281 AALAHPFF 288

>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v- H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor Length = 302

Iteration: 1
 Score = 65.5 bits (158), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 67/248 (27%), Positives = 99/248 (39%), Gaps = 80/248 (32%)
Query: 2   FAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG 61
            A  H   ++H DLKP+N LL+++E                           AIK+ DFG
Sbjct: 119 LAFCHSHRVLHRDLKPQN-LLINTE--------------------------GAIKLADFG 151
Query: 62  -STTYERPDQNYI--VSTRHYRAPEVILGLGW-TYPCDIWSVGCILVELCTGEALFQTHE 117
            +  +  P + Y   V T  YRAPE++LG  + +   DIWS+GCI  E+ T  ALF    
Sbjct: 152 LARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDS 211
Query: 118 NLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVP 177
            ++ L  + R LG  P  ++                 WP           V  +P  +  
Sbjct: 212 EIDQLFRIFRTLG-TPDEVV-----------------WP----------GVTSMPDYKPS 243
Query: 178 FFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAR 237
           F   +  +F                    ++  +D    D   LL  +L YDP  R++A+
Sbjct: 244 FPKWARQDFSK------------------VVPPLDE---DGRSLLSQMLHYDPNKRISAK 282
Query: 238 EALRHPFF 245
            AL HPFF
Sbjct: 283 AALAHPFF 290

>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human Cyclin A3 Complex With The Inhibitor Nu6102 Length = 300

Iteration: 1
 Score = 65.5 bits (158), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 67/248 (27%), Positives = 99/248 (39%), Gaps = 80/248 (32%)
Query: 2   FAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG 61
            A  H   ++H DLKP+N LL+++E                           AIK+ DFG
Sbjct: 118 LAFCHSHRVLHRDLKPQN-LLINTE--------------------------GAIKLADFG 150
Query: 62  -STTYERPDQNYI--VSTRHYRAPEVILGLGW-TYPCDIWSVGCILVELCTGEALFQTHE 117
            +  +  P + Y   V T  YRAPE++LG  + +   DIWS+GCI  E+ T  ALF    
Sbjct: 151 LARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDS 210
Query: 118 NLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVP 177
            ++ L  + R LG  P  ++                 WP           V  +P  +  
Sbjct: 211 EIDQLFRIFRTLG-TPDEVV-----------------WP----------GVTSMPDYKPS 242
Query: 178 FFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAR 237
           F   +  +F                    ++  +D    D   LL  +L YDP  R++A+
Sbjct: 243 FPKWARQDFSK------------------VVPPLDE---DGRSLLSQMLHYDPNKRISAK 281
Query: 238 EALRHPFF 245
            AL HPFF
Sbjct: 282 AALAHPFF 289

>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2 Length = 364

Iteration: 1
 Score = 65.5 bits (158), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 61/250 (24%), Positives = 99/250 (39%), Gaps = 81/250 (32%)
Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           +H   ++H DLKP N+LL ++                             +K+ DFG   
Sbjct: 144 IHSANVLHRDLKPSNLLLNTT---------------------------CDLKICDFGLAR 176
Query: 65  YERPDQNYI------VSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHE 117
              PD ++       V+TR YRAPE++L   G+T   DIWSVGCIL E+ +   +F    
Sbjct: 177 VADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 236
Query: 118 NLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVP 177
            L+ L     +LG L                         G+ S+E +  ++ L      
Sbjct: 237 YLDQL---NHILGIL-------------------------GSPSQEDLNCIINL------ 262
Query: 178 FFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAR 237
                  + + Y L+    + +     N +  + D  A D   LL  +L ++P  R+   
Sbjct: 263 -------KARNYLLSLPHKNKVP---WNRLFPNADSKALD---LLDKMLTFNPHKRIEVE 309
Query: 238 EALRHPFFTR 247
           +AL HP+  +
Sbjct: 310 QALAHPYLEQ 319

>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2 Complexed With A Nucleoside Inhibitor Length = 298

Iteration: 1
 Score = 65.5 bits (158), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 67/248 (27%), Positives = 99/248 (39%), Gaps = 80/248 (32%)
Query: 2   FAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG 61
            A  H   ++H DLKP+N LL+++E                           AIK+ DFG
Sbjct: 115 LAFCHSHRVLHRDLKPQN-LLINTE--------------------------GAIKLADFG 147
Query: 62  -STTYERPDQNYI--VSTRHYRAPEVILGLGW-TYPCDIWSVGCILVELCTGEALFQTHE 117
            +  +  P + Y   V T  YRAPE++LG  + +   DIWS+GCI  E+ T  ALF    
Sbjct: 148 LARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDS 207
Query: 118 NLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVP 177
            ++ L  + R LG  P  ++                 WP           V  +P  +  
Sbjct: 208 EIDQLFRIFRTLG-TPDEVV-----------------WP----------GVTSMPDYKPS 239
Query: 178 FFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAR 237
           F   +  +F                    ++  +D    D   LL  +L YDP  R++A+
Sbjct: 240 FPKWARQDFSK------------------VVPPLDE---DGRSLLSQMLHYDPNKRISAK 278
Query: 238 EALRHPFF 245
            AL HPFF
Sbjct: 279 AALAHPFF 286

>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human Cyclin A3 Complex With Atp Length = 302

Iteration: 1
 Score = 65.5 bits (158), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 67/248 (27%), Positives = 99/248 (39%), Gaps = 80/248 (32%)
Query: 2   FAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG 61
            A  H   ++H DLKP+N LL+++E                           AIK+ DFG
Sbjct: 119 LAFCHSHRVLHRDLKPQN-LLINTE--------------------------GAIKLADFG 151
Query: 62  -STTYERPDQNYI--VSTRHYRAPEVILGLGW-TYPCDIWSVGCILVELCTGEALFQTHE 117
            +  +  P + Y   V T  YRAPE++LG  + +   DIWS+GCI  E+ T  ALF    
Sbjct: 152 LARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDS 211
Query: 118 NLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVP 177
            ++ L  + R LG  P  ++                 WP           V  +P  +  
Sbjct: 212 EIDQLFRIFRTLG-TPDEVV-----------------WP----------GVTSMPDYKPS 243
Query: 178 FFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAR 237
           F   +  +F                    ++  +D    D   LL  +L YDP  R++A+
Sbjct: 244 FPKWARQDFSK------------------VVPPLDE---DGRSLLSQMLHYDPNKRISAK 282
Query: 238 EALRHPFF 245
            AL HPFF
Sbjct: 283 AALAHPFF 290

>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 300

Iteration: 1
 Score = 65.5 bits (158), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 67/248 (27%), Positives = 99/248 (39%), Gaps = 80/248 (32%)
Query: 2   FAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG 61
            A  H   ++H DLKP+N LL+++E                           AIK+ DFG
Sbjct: 118 LAFCHSHRVLHRDLKPQN-LLINTE--------------------------GAIKLADFG 150
Query: 62  -STTYERPDQNYI--VSTRHYRAPEVILGLGW-TYPCDIWSVGCILVELCTGEALFQTHE 117
            +  +  P + Y   V T  YRAPE++LG  + +   DIWS+GCI  E+ T  ALF    
Sbjct: 151 LARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDS 210
Query: 118 NLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVP 177
            ++ L  + R LG  P  ++                 WP           V  +P  +  
Sbjct: 211 EIDQLFRIFRTLG-TPDEVV-----------------WP----------GVTSMPDYKPS 242
Query: 178 FFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAR 237
           F   +  +F                    ++  +D    D   LL  +L YDP  R++A+
Sbjct: 243 FPKWARQDFSK------------------VVPPLDE---DGRSLLSQMLHYDPNKRISAK 281
Query: 238 EALRHPFF 245
            AL HPFF
Sbjct: 282 AALAHPFF 289

>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex With Atp Length = 301

Iteration: 1
 Score = 65.5 bits (158), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 67/248 (27%), Positives = 99/248 (39%), Gaps = 80/248 (32%)
Query: 2   FAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG 61
            A  H   ++H DLKP+N LL+++E                           AIK+ DFG
Sbjct: 119 LAFCHSHRVLHRDLKPQN-LLINTE--------------------------GAIKLADFG 151
Query: 62  -STTYERPDQNYI--VSTRHYRAPEVILGLGW-TYPCDIWSVGCILVELCTGEALFQTHE 117
            +  +  P + Y   V T  YRAPE++LG  + +   DIWS+GCI  E+ T  ALF    
Sbjct: 152 LARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDS 211
Query: 118 NLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVP 177
            ++ L  + R LG  P  ++                 WP           V  +P  +  
Sbjct: 212 EIDQLFRIFRTLG-TPDEVV-----------------WP----------GVTSMPDYKPS 243
Query: 178 FFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAR 237
           F   +  +F                    ++  +D    D   LL  +L YDP  R++A+
Sbjct: 244 FPKWARQDFSK------------------VVPPLDE---DGRSLLSQMLHYDPNKRISAK 282
Query: 238 EALRHPFF 245
            AL HPFF
Sbjct: 283 AALAHPFF 290

>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A 2-amino-4- Heteroaryl-pyrimidine Inhibitor Length = 301

Iteration: 1
 Score = 65.5 bits (158), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 67/248 (27%), Positives = 99/248 (39%), Gaps = 80/248 (32%)
Query: 2   FAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG 61
            A  H   ++H DLKP+N LL+++E                           AIK+ DFG
Sbjct: 118 LAFCHSHRVLHRDLKPQN-LLINTE--------------------------GAIKLADFG 150
Query: 62  -STTYERPDQNYI--VSTRHYRAPEVILGLGW-TYPCDIWSVGCILVELCTGEALFQTHE 117
            +  +  P + Y   V T  YRAPE++LG  + +   DIWS+GCI  E+ T  ALF    
Sbjct: 151 LARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDS 210
Query: 118 NLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVP 177
            ++ L  + R LG  P  ++                 WP           V  +P  +  
Sbjct: 211 EIDQLFRIFRTLG-TPDEVV-----------------WP----------GVTSMPDYKPS 242
Query: 178 FFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAR 237
           F   +  +F                    ++  +D    D   LL  +L YDP  R++A+
Sbjct: 243 FPKWARQDFSK------------------VVPPLDE---DGRSLLSQMLHYDPNKRISAK 281
Query: 238 EALRHPFF 245
            AL HPFF
Sbjct: 282 AALAHPFF 289

>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed With A 2-arylamino-4-cyclohexylmethyl-5-nitroso-6- aminopyrimidine Inhibitor Length = 302

Iteration: 1
 Score = 65.5 bits (158), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 67/248 (27%), Positives = 99/248 (39%), Gaps = 80/248 (32%)
Query: 2   FAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG 61
            A  H   ++H DLKP+N LL+++E                           AIK+ DFG
Sbjct: 119 LAFCHSHRVLHRDLKPQN-LLINTE--------------------------GAIKLADFG 151
Query: 62  -STTYERPDQNYI--VSTRHYRAPEVILGLGW-TYPCDIWSVGCILVELCTGEALFQTHE 117
            +  +  P + Y   V T  YRAPE++LG  + +   DIWS+GCI  E+ T  ALF    
Sbjct: 152 LARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDS 211
Query: 118 NLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVP 177
            ++ L  + R LG  P  ++                 WP           V  +P  +  
Sbjct: 212 EIDQLFRIFRTLG-TPDEVV-----------------WP----------GVTSMPDYKPS 243
Query: 178 FFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAR 237
           F   +  +F                    ++  +D    D   LL  +L YDP  R++A+
Sbjct: 244 FPKWARQDFSK------------------VVPPLDE---DGRSLLSQMLHYDPNKRISAK 282
Query: 238 EALRHPFF 245
            AL HPFF
Sbjct: 283 AALAHPFF 290

>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4 Inhibitor Length = 298

Iteration: 1
 Score = 65.5 bits (158), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 67/248 (27%), Positives = 99/248 (39%), Gaps = 80/248 (32%)
Query: 2   FAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG 61
            A  H   ++H DLKP+N LL+++E                           AIK+ DFG
Sbjct: 115 LAFCHSHRVLHRDLKPQN-LLINTE--------------------------GAIKLADFG 147
Query: 62  -STTYERPDQNYI--VSTRHYRAPEVILGLGW-TYPCDIWSVGCILVELCTGEALFQTHE 117
            +  +  P + Y   V T  YRAPE++LG  + +   DIWS+GCI  E+ T  ALF    
Sbjct: 148 LARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDS 207
Query: 118 NLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVP 177
            ++ L  + R LG  P  ++                 WP           V  +P  +  
Sbjct: 208 EIDQLFRIFRTLG-TPDEVV-----------------WP----------GVTSMPDYKPS 239
Query: 178 FFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAR 237
           F   +  +F                    ++  +D    D   LL  +L YDP  R++A+
Sbjct: 240 FPKWARQDFSK------------------VVPPLDE---DGRSLLSQMLHYDPNKRISAK 278
Query: 238 EALRHPFF 245
            AL HPFF
Sbjct: 279 AALAHPFF 286

>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed With A Bisanilinopyrimidine Inhibitor Length = 302

Iteration: 1
 Score = 65.5 bits (158), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 67/248 (27%), Positives = 99/248 (39%), Gaps = 80/248 (32%)
Query: 2   FAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG 61
            A  H   ++H DLKP+N LL+++E                           AIK+ DFG
Sbjct: 119 LAFCHSHRVLHRDLKPQN-LLINTE--------------------------GAIKLADFG 151
Query: 62  -STTYERPDQNYI--VSTRHYRAPEVILGLGW-TYPCDIWSVGCILVELCTGEALFQTHE 117
            +  +  P + Y   V T  YRAPE++LG  + +   DIWS+GCI  E+ T  ALF    
Sbjct: 152 LARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDS 211
Query: 118 NLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVP 177
            ++ L  + R LG  P  ++                 WP           V  +P  +  
Sbjct: 212 EIDQLFRIFRTLG-TPDEVV-----------------WP----------GVTSMPDYKPS 243
Query: 178 FFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAR 237
           F   +  +F                    ++  +D    D   LL  +L YDP  R++A+
Sbjct: 244 FPKWARQDFSK------------------VVPPLDE---DGRSLLSQMLHYDPNKRISAK 282
Query: 238 EALRHPFF 245
            AL HPFF
Sbjct: 283 AALAHPFF 290

>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine Length = 299

Iteration: 1
 Score = 65.1 bits (157), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 66/248 (26%), Positives = 98/248 (39%), Gaps = 80/248 (32%)
Query: 2   FAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG 61
            A  H   ++H DLKP+N LL+++E                           AIK+ DFG
Sbjct: 116 LAFCHSHRVLHRDLKPQN-LLINTE--------------------------GAIKLADFG 148
Query: 62  -STTYERPDQNYI--VSTRHYRAPEVILGLGW-TYPCDIWSVGCILVELCTGEALFQTHE 117
            +  +  P + Y   V T  YRAPE++LG  + +   DIWS+GCI  E+ T  ALF    
Sbjct: 149 LARAFGVPVRTYTHEVVTLWYRAPEILLGXKYYSTAVDIWSLGCIFAEMVTRRALFPGDS 208
Query: 118 NLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVP 177
            ++ L  + R LG  P  ++                 WP           V  +P  +  
Sbjct: 209 EIDQLFRIFRTLG-TPDEVV-----------------WP----------GVTSMPDYKPS 240
Query: 178 FFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAR 237
           F   +  +F                    ++  +D     L   L  +L YDP  R++A+
Sbjct: 241 FPKWARQDFSK------------------VVPPLDEDGRSL---LSQMLHYDPNKRISAK 279
Query: 238 EALRHPFF 245
            AL HPFF
Sbjct: 280 AALAHPFF 287

>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine Length = 306

Iteration: 1
 Score = 65.1 bits (157), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 66/248 (26%), Positives = 98/248 (39%), Gaps = 80/248 (32%)
Query: 2   FAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG 61
            A  H   ++H DLKP+N LL+++E                           AIK+ DFG
Sbjct: 123 LAFCHSHRVLHRDLKPQN-LLINTE--------------------------GAIKLADFG 155
Query: 62  -STTYERPDQNYI--VSTRHYRAPEVILGLGW-TYPCDIWSVGCILVELCTGEALFQTHE 117
            +  +  P + Y   V T  YRAPE++LG  + +   DIWS+GCI  E+ T  ALF    
Sbjct: 156 LARAFGVPVRTYTHEVVTLWYRAPEILLGXKYYSTAVDIWSLGCIFAEMVTRRALFPGDS 215
Query: 118 NLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVP 177
            ++ L  + R LG  P  ++                 WP           V  +P  +  
Sbjct: 216 EIDQLFRIFRTLG-TPDEVV-----------------WP----------GVTSMPDYKPS 247
Query: 178 FFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAR 237
           F   +  +F                    ++  +D     L   L  +L YDP  R++A+
Sbjct: 248 FPKWARQDFSK------------------VVPPLDEDGRSL---LSQMLHYDPNKRISAK 286
Query: 238 EALRHPFF 245
            AL HPFF
Sbjct: 287 AALAHPFF 294

>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM IONS Length = 296

Iteration: 1
 Score = 64.7 bits (156), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 66/248 (26%), Positives = 98/248 (39%), Gaps = 80/248 (32%)
Query: 2   FAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG 61
            A  H   ++H DLKP+N LL+++E                           AIK+ DFG
Sbjct: 115 LAFCHSHRVLHRDLKPQN-LLINTE--------------------------GAIKLADFG 147
Query: 62  -STTYERPDQNYI--VSTRHYRAPEVILGLGW-TYPCDIWSVGCILVELCTGEALFQTHE 117
            +  +  P + Y   V T  YRAPE++LG  + +   DIWS+GCI  E+ T  ALF    
Sbjct: 148 LARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDS 207
Query: 118 NLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVP 177
            ++ L  + R LG  P  ++                 WP           V  +P  +  
Sbjct: 208 EIDQLFRIFRTLG-TPDEVV-----------------WP----------GVTSMPDYKPS 239
Query: 178 FFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAR 237
           F   +  +F                    ++  +D     L   L  +L YDP  R++A+
Sbjct: 240 FPKWARQDFSK------------------VVPPLDEDGRSL---LSQMLHYDPNKRISAK 278
Query: 238 EALRHPFF 245
            AL HPFF
Sbjct: 279 AALAHPFF 286

>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide, Compound (S)-8b Length = 299

Iteration: 1
 Score = 64.7 bits (156), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 66/248 (26%), Positives = 98/248 (39%), Gaps = 80/248 (32%)
Query: 2   FAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG 61
            A  H   ++H DLKP+N LL+++E                           AIK+ DFG
Sbjct: 116 LAFCHSHRVLHRDLKPQN-LLINTE--------------------------GAIKLADFG 148
Query: 62  -STTYERPDQNYI--VSTRHYRAPEVILGLGW-TYPCDIWSVGCILVELCTGEALFQTHE 117
            +  +  P + Y   V T  YRAPE++LG  + +   DIWS+GCI  E+ T  ALF    
Sbjct: 149 LARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDS 208
Query: 118 NLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVP 177
            ++ L  + R LG  P  ++                 WP           V  +P  +  
Sbjct: 209 EIDQLFRIFRTLG-TPDEVV-----------------WP----------GVTSMPDYKPS 240
Query: 178 FFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAR 237
           F   +  +F                    ++  +D     L   L  +L YDP  R++A+
Sbjct: 241 FPKWARQDFSK------------------VVPPLDEDGRSL---LSQMLHYDPNKRISAK 279
Query: 238 EALRHPFF 245
            AL HPFF
Sbjct: 280 AALAHPFF 287

>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex Length = 298

Iteration: 1
 Score = 64.7 bits (156), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 66/248 (26%), Positives = 98/248 (39%), Gaps = 80/248 (32%)
Query: 2   FAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG 61
            A  H   ++H DLKP+N LL+++E                           AIK+ DFG
Sbjct: 115 LAFCHSHRVLHRDLKPQN-LLINTE--------------------------GAIKLADFG 147
Query: 62  -STTYERPDQNYI--VSTRHYRAPEVILGLGW-TYPCDIWSVGCILVELCTGEALFQTHE 117
            +  +  P + Y   V T  YRAPE++LG  + +   DIWS+GCI  E+ T  ALF    
Sbjct: 148 LARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDS 207
Query: 118 NLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVP 177
            ++ L  + R LG  P  ++                 WP           V  +P  +  
Sbjct: 208 EIDQLFRIFRTLG-TPDEVV-----------------WP----------GVTSMPDYKPS 239
Query: 178 FFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAR 237
           F   +  +F                    ++  +D     L   L  +L YDP  R++A+
Sbjct: 240 FPKWARQDFSK------------------VVPPLDEDGRSL---LSQMLHYDPNKRISAK 278
Query: 238 EALRHPFF 245
            AL HPFF
Sbjct: 279 AALAHPFF 286

>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine Length = 299

Iteration: 1
 Score = 64.7 bits (156), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 66/248 (26%), Positives = 98/248 (39%), Gaps = 80/248 (32%)
Query: 2   FAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG 61
            A  H   ++H DLKP+N LL+++E                           AIK+ DFG
Sbjct: 116 LAFCHSHRVLHRDLKPQN-LLINTE--------------------------GAIKLADFG 148
Query: 62  -STTYERPDQNYI--VSTRHYRAPEVILGLGW-TYPCDIWSVGCILVELCTGEALFQTHE 117
            +  +  P + Y   V T  YRAPE++LG  + +   DIWS+GCI  E+ T  ALF    
Sbjct: 149 LARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDS 208
Query: 118 NLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVP 177
            ++ L  + R LG  P  ++                 WP           V  +P  +  
Sbjct: 209 EIDQLFRIFRTLG-TPDEVV-----------------WP----------GVTSMPDYKPS 240
Query: 178 FFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAR 237
           F   +  +F                    ++  +D     L   L  +L YDP  R++A+
Sbjct: 241 FPKWARQDFSK------------------VVPPLDEDGRSL---LSQMLHYDPNKRISAK 279
Query: 238 EALRHPFF 245
            AL HPFF
Sbjct: 280 AALAHPFF 287

>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of Cyclin-Dependent Kinase Inhibitors Identified Through Structure-Based Hybridisation Length = 299

Iteration: 1
 Score = 64.3 bits (155), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 66/248 (26%), Positives = 98/248 (39%), Gaps = 80/248 (32%)
Query: 2   FAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG 61
            A  H   ++H DLKP+N LL+++E                           AIK+ DFG
Sbjct: 116 LAFCHSHRVLHRDLKPQN-LLINTE--------------------------GAIKLADFG 148
Query: 62  -STTYERPDQNYI--VSTRHYRAPEVILGLGW-TYPCDIWSVGCILVELCTGEALFQTHE 117
            +  +  P + Y   V T  YRAPE++LG  + +   DIWS+GCI  E+ T  ALF    
Sbjct: 149 LARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDS 208
Query: 118 NLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVP 177
            ++ L  + R LG  P  ++                 WP           V  +P  +  
Sbjct: 209 EIDQLFRIFRTLG-TPDEVV-----------------WP----------GVTSMPDYKPS 240
Query: 178 FFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAR 237
           F   +  +F                    ++  +D     L   L  +L YDP  R++A+
Sbjct: 241 FPKWARQDFSK------------------VVPPLDEDGRSL---LSQMLHYDPNKRISAK 279
Query: 238 EALRHPFF 245
            AL HPFF
Sbjct: 280 AALAHPFF 287

>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino Pyrimidine Cdk4 Inhibitor Length = 298

Iteration: 1
 Score = 64.3 bits (155), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 66/248 (26%), Positives = 98/248 (39%), Gaps = 80/248 (32%)
Query: 2   FAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG 61
            A  H   ++H DLKP+N LL+++E                           AIK+ DFG
Sbjct: 115 LAFCHSHRVLHRDLKPQN-LLINTE--------------------------GAIKLADFG 147
Query: 62  -STTYERPDQNYI--VSTRHYRAPEVILGLGW-TYPCDIWSVGCILVELCTGEALFQTHE 117
            +  +  P + Y   V T  YRAPE++LG  + +   DIWS+GCI  E+ T  ALF    
Sbjct: 148 LARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDS 207
Query: 118 NLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVP 177
            ++ L  + R LG  P  ++                 WP           V  +P  +  
Sbjct: 208 EIDQLFRIFRTLG-TPDEVV-----------------WP----------GVTSMPDYKPS 239
Query: 178 FFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAR 237
           F   +  +F                    ++  +D     L   L  +L YDP  R++A+
Sbjct: 240 FPKWARQDFSK------------------VVPPLDEDGRSL---LSQMLHYDPNKRISAK 278
Query: 238 EALRHPFF 245
            AL HPFF
Sbjct: 279 AALAHPFF 286

>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of 8-Anilino-1-Naphthalene Sulfonate Length = 306

Iteration: 1
 Score = 64.3 bits (155), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 66/248 (26%), Positives = 98/248 (39%), Gaps = 80/248 (32%)
Query: 2   FAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG 61
            A  H   ++H DLKP+N LL+++E                           AIK+ DFG
Sbjct: 123 LAFCHSHRVLHRDLKPQN-LLINTE--------------------------GAIKLADFG 155
Query: 62  -STTYERPDQNYI--VSTRHYRAPEVILGLGW-TYPCDIWSVGCILVELCTGEALFQTHE 117
            +  +  P + Y   V T  YRAPE++LG  + +   DIWS+GCI  E+ T  ALF    
Sbjct: 156 LARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDS 215
Query: 118 NLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVP 177
            ++ L  + R LG  P  ++                 WP           V  +P  +  
Sbjct: 216 EIDQLFRIFRTLG-TPDEVV-----------------WP----------GVTSMPDYKPS 247
Query: 178 FFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAR 237
           F   +  +F                    ++  +D     L   L  +L YDP  R++A+
Sbjct: 248 FPKWARQDFSK------------------VVPPLDEDGRSL---LSQMLHYDPNKRISAK 286
Query: 238 EALRHPFF 245
            AL HPFF
Sbjct: 287 AALAHPFF 294

>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex Length = 299

Iteration: 1
 Score = 64.3 bits (155), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 66/248 (26%), Positives = 98/248 (39%), Gaps = 80/248 (32%)
Query: 2   FAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG 61
            A  H   ++H DLKP+N LL+++E                           AIK+ DFG
Sbjct: 116 LAFCHSHRVLHRDLKPQN-LLINTE--------------------------GAIKLADFG 148
Query: 62  -STTYERPDQNYI--VSTRHYRAPEVILGLGW-TYPCDIWSVGCILVELCTGEALFQTHE 117
            +  +  P + Y   V T  YRAPE++LG  + +   DIWS+GCI  E+ T  ALF    
Sbjct: 149 LARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDS 208
Query: 118 NLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVP 177
            ++ L  + R LG  P  ++                 WP           V  +P  +  
Sbjct: 209 EIDQLFRIFRTLG-TPDEVV-----------------WP----------GVTSMPDYKPS 240
Query: 178 FFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAR 237
           F   +  +F                    ++  +D     L   L  +L YDP  R++A+
Sbjct: 241 FPKWARQDFSK------------------VVPPLDEDGRSL---LSQMLHYDPNKRISAK 279
Query: 238 EALRHPFF 245
            AL HPFF
Sbjct: 280 AALAHPFF 287

>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC Length = 405

Iteration: 1
 Score = 64.3 bits (155), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 66/253 (26%), Positives = 103/253 (40%), Gaps = 61/253 (24%)
Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG-ST 63
           +H   ++H DLKP N+L++                          P+   +K+ D G + 
Sbjct: 144 LHANWVLHRDLKPANILVMGEG-----------------------PERGRVKIADMGFAR 180
Query: 64  TYERP-----DQNYIVSTRHYRAPEVILGL-GWTYPCDIWSVGCILVELCTGEALFQTHE 117
            +  P     D + +V T  YRAPE++LG   +T   DIW++GCI  EL T E +F   +
Sbjct: 181 LFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQ 240
Query: 118 NLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVP 177
                   E +    P H   ++DR           DW       E IK + +   L   
Sbjct: 241 --------EDIKTSNPYHH-DQLDRIFNVMGFPADKDW-------EDIKKMPEHSTLMKD 284
Query: 178 FFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAR 237
           F   ++            T+C  S  + +    V   +    HLLQ LL  DP  R+T+ 
Sbjct: 285 FRRNTY------------TNC--SLIKYMEKHKVKPDSKAF-HLLQKLLTMDPIKRITSE 329
Query: 238 EALRHPFFTRDHL 250
           +A++ P+F  D L
Sbjct: 330 QAMQDPYFLEDPL 342

>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E Length = 298

Iteration: 1
 Score = 64.3 bits (155), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 66/248 (26%), Positives = 98/248 (39%), Gaps = 80/248 (32%)
Query: 2   FAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG 61
            A  H   ++H DLKP+N LL+++E                           AIK+ DFG
Sbjct: 116 LAFCHSHRVLHRDLKPQN-LLINTE--------------------------GAIKLADFG 148
Query: 62  -STTYERPDQNYI--VSTRHYRAPEVILGLGW-TYPCDIWSVGCILVELCTGEALFQTHE 117
            +  +  P + Y   V T  YRAPE++LG  + +   DIWS+GCI  E+ T  ALF    
Sbjct: 149 LARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDS 208
Query: 118 NLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVP 177
            ++ L  + R LG  P  ++                 WP           V  +P  +  
Sbjct: 209 EIDQLFRIFRTLG-TPDEVV-----------------WP----------GVTSMPDYKPS 240
Query: 178 FFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAR 237
           F   +  +F                    ++  +D     L   L  +L YDP  R++A+
Sbjct: 241 FPKWARQDFSK------------------VVPPLDEDGRSL---LSQMLHYDPNKRISAK 279
Query: 238 EALRHPFF 245
            AL HPFF
Sbjct: 280 AALAHPFF 287

>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX WITH THE Inhibitor Meriolin 3 Length = 300

Iteration: 1
 Score = 64.3 bits (155), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 66/248 (26%), Positives = 98/248 (39%), Gaps = 80/248 (32%)
Query: 2   FAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG 61
            A  H   ++H DLKP+N LL+++E                           AIK+ DFG
Sbjct: 117 LAFCHSHRVLHRDLKPQN-LLINTE--------------------------GAIKLADFG 149
Query: 62  -STTYERPDQNYI--VSTRHYRAPEVILGLGW-TYPCDIWSVGCILVELCTGEALFQTHE 117
            +  +  P + Y   V T  YRAPE++LG  + +   DIWS+GCI  E+ T  ALF    
Sbjct: 150 LARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDS 209
Query: 118 NLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVP 177
            ++ L  + R LG  P  ++                 WP           V  +P  +  
Sbjct: 210 EIDQLFRIFRTLG-TPDEVV-----------------WP----------GVTSMPDYKPS 241
Query: 178 FFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAR 237
           F   +  +F                    ++  +D     L   L  +L YDP  R++A+
Sbjct: 242 FPKWARQDFSK------------------VVPPLDEDGRSL---LSQMLHYDPNKRISAK 280
Query: 238 EALRHPFF 245
            AL HPFF
Sbjct: 281 AALAHPFF 288

>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED With The Inhibitor Nu2058 Length = 303

Iteration: 1
 Score = 64.3 bits (155), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 66/248 (26%), Positives = 98/248 (39%), Gaps = 80/248 (32%)
Query: 2   FAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG 61
            A  H   ++H DLKP+N LL+++E                           AIK+ DFG
Sbjct: 120 LAFCHSHRVLHRDLKPQN-LLINTE--------------------------GAIKLADFG 152
Query: 62  -STTYERPDQNYI--VSTRHYRAPEVILGLGW-TYPCDIWSVGCILVELCTGEALFQTHE 117
            +  +  P + Y   V T  YRAPE++LG  + +   DIWS+GCI  E+ T  ALF    
Sbjct: 153 LARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDS 212
Query: 118 NLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVP 177
            ++ L  + R LG  P  ++                 WP           V  +P  +  
Sbjct: 213 EIDQLFRIFRTLG-TPDEVV-----------------WP----------GVTSMPDYKPS 244
Query: 178 FFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAR 237
           F   +  +F                    ++  +D     L   L  +L YDP  R++A+
Sbjct: 245 FPKWARQDFSK------------------VVPPLDEDGRSL---LSQMLHYDPNKRISAK 283
Query: 238 EALRHPFF 245
            AL HPFF
Sbjct: 284 AALAHPFF 291

>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With The Inhibitor Indirubin-5-Sulphonate Bound Length = 297

Iteration: 1
 Score = 64.3 bits (155), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 66/248 (26%), Positives = 98/248 (39%), Gaps = 80/248 (32%)
Query: 2   FAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG 61
            A  H   ++H DLKP+N LL+++E                           AIK+ DFG
Sbjct: 116 LAFCHSHRVLHRDLKPQN-LLINTE--------------------------GAIKLADFG 148
Query: 62  -STTYERPDQNYI--VSTRHYRAPEVILGLGW-TYPCDIWSVGCILVELCTGEALFQTHE 117
            +  +  P + Y   V T  YRAPE++LG  + +   DIWS+GCI  E+ T  ALF    
Sbjct: 149 LARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDS 208
Query: 118 NLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVP 177
            ++ L  + R LG  P  ++                 WP           V  +P  +  
Sbjct: 209 EIDQLFRIFRTLG-TPDEVV-----------------WP----------GVTSMPDYKPS 240
Query: 178 FFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAR 237
           F   +  +F                    ++  +D     L   L  +L YDP  R++A+
Sbjct: 241 FPKWARQDFSK------------------VVPPLDEDGRSL---LSQMLHYDPNKRISAK 279
Query: 238 EALRHPFF 245
            AL HPFF
Sbjct: 280 AALAHPFF 287

>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A Length = 298

Iteration: 1
 Score = 64.3 bits (155), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 66/248 (26%), Positives = 98/248 (39%), Gaps = 80/248 (32%)
Query: 2   FAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG 61
            A  H   ++H DLKP+N LL+++E                           AIK+ DFG
Sbjct: 115 LAFCHSHRVLHRDLKPQN-LLINTE--------------------------GAIKLADFG 147
Query: 62  -STTYERPDQNYI--VSTRHYRAPEVILGLGW-TYPCDIWSVGCILVELCTGEALFQTHE 117
            +  +  P + Y   V T  YRAPE++LG  + +   DIWS+GCI  E+ T  ALF    
Sbjct: 148 LARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDS 207
Query: 118 NLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVP 177
            ++ L  + R LG  P  ++                 WP           V  +P  +  
Sbjct: 208 EIDQLFRIFRTLG-TPDEVV-----------------WP----------GVTSMPDYKPS 239
Query: 178 FFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAR 237
           F   +  +F                    ++  +D     L   L  +L YDP  R++A+
Sbjct: 240 FPKWARQDFSK------------------VVPPLDEDGRSL---LSQMLHYDPNKRISAK 278
Query: 238 EALRHPFF 245
            AL HPFF
Sbjct: 279 AALAHPFF 286

>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic Length = 298

Iteration: 1
 Score = 64.3 bits (155), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 66/248 (26%), Positives = 98/248 (39%), Gaps = 80/248 (32%)
Query: 2   FAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG 61
            A  H   ++H DLKP+N LL+++E                           AIK+ DFG
Sbjct: 117 LAFCHSHRVLHRDLKPQN-LLINTE--------------------------GAIKLADFG 149
Query: 62  -STTYERPDQNYI--VSTRHYRAPEVILGLGW-TYPCDIWSVGCILVELCTGEALFQTHE 117
            +  +  P + Y   V T  YRAPE++LG  + +   DIWS+GCI  E+ T  ALF    
Sbjct: 150 LARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDS 209
Query: 118 NLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVP 177
            ++ L  + R LG  P  ++                 WP           V  +P  +  
Sbjct: 210 EIDQLFRIFRTLG-TPDEVV-----------------WP----------GVTSMPDYKPS 241
Query: 178 FFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAR 237
           F   +  +F                    ++  +D     L   L  +L YDP  R++A+
Sbjct: 242 FPKWARQDFSK------------------VVPPLDEDGRSL---LSQMLHYDPNKRISAK 280
Query: 238 EALRHPFF 245
            AL HPFF
Sbjct: 281 AALAHPFF 288

>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e) Length = 358

Iteration: 1
 Score = 64.3 bits (155), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 60/250 (24%), Positives = 98/250 (39%), Gaps = 81/250 (32%)
Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           +H   ++H DLKP N+LL ++                             +K+ DFG   
Sbjct: 138 IHSANVLHRDLKPSNLLLNTT---------------------------CDLKICDFGLAR 170
Query: 65  YERPDQNYI------VSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHE 117
              PD ++       V+TR YRAPE++L   G+T   DIWSVGCIL E+ +   +F    
Sbjct: 171 VADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 230
Query: 118 NLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVP 177
            L+ L     +LG L                         G+  +E +  ++ L      
Sbjct: 231 YLDQL---NHILGIL-------------------------GSPEQEDLNCIINL------ 256
Query: 178 FFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAR 237
                  + + Y L+    + +     N +  + D  A D   LL  +L ++P  R+   
Sbjct: 257 -------KARNYLLSLPHKNKVP---WNRLFPNADSKALD---LLDKMLTFNPHKRIEVE 303
Query: 238 EALRHPFFTR 247
           +AL HP+  +
Sbjct: 304 QALAHPYLEQ 313

>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of Cyclin-dependent Kinase Inhibitors Identified Through Structure-based Hybridisation Length = 299

Iteration: 1
 Score = 63.9 bits (154), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 65/244 (26%), Positives = 97/244 (39%), Gaps = 80/244 (32%)
Query: 6   HDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG-STT 64
           H   ++H DLKP+N LL+++E                           AIK+ DFG +  
Sbjct: 120 HSHRVLHRDLKPQN-LLINTE--------------------------GAIKLADFGLARA 152
Query: 65  YERPDQNYI--VSTRHYRAPEVILGLGW-TYPCDIWSVGCILVELCTGEALFQTHENLEH 121
           +  P + Y   V T  YRAPE++LG  + +   DIWS+GCI  E+ T  ALF     ++ 
Sbjct: 153 FGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQ 212
Query: 122 LAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVPFFYG 181
           L  + R LG  P  ++                 WP           V  +P  +  F   
Sbjct: 213 LFRIFRTLG-TPDEVV-----------------WP----------GVTSMPDYKPSFPKW 244
Query: 182 SFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALR 241
           +  +F                    ++  +D     L   L  +L YDP  R++A+ AL 
Sbjct: 245 ARQDFSK------------------VVPPLDEDGRSL---LSQMLHYDPNKRISAKAALA 283
Query: 242 HPFF 245
           HPFF
Sbjct: 284 HPFF 287

>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7 Length = 346

Iteration: 1
 Score = 62.4 bits (150), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 62/248 (25%), Positives = 97/248 (39%), Gaps = 83/248 (33%)
Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG-ST 63
           +H   ++H DLKP N+LL                            ++  +K+ DFG + 
Sbjct: 128 LHQHWILHRDLKPNNLLL---------------------------DENGVLKLADFGLAK 160
Query: 64  TYERPDQNYI--VSTRHYRAPEVILGLG-WTYPCDIWSVGCILVELCTGEALFQTHENLE 120
           ++  P++ Y   V TR YRAPE++ G   +    D+W+VGCIL EL           +L+
Sbjct: 161 SFGSPNRAYXHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLD 220
Query: 121 HLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVPFFY 180
            L  +   LG   +                    WP+          +  LP       Y
Sbjct: 221 QLTRIFETLGTPTEE------------------QWPD----------MCSLPD------Y 246
Query: 181 GSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAG-DLTHLLQGLLRYDPTDRLTAREA 239
            +F  F G  L                  H+  +AG DL  L+QGL  ++P  R+TA +A
Sbjct: 247 VTFKSFPGIPL-----------------HHIFSAAGDDLLDLIQGLFLFNPCARITATQA 289
Query: 240 LRHPFFTR 247
           L+  +F+ 
Sbjct: 290 LKMKYFSN 297

>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin Length = 306

Iteration: 1
 Score = 62.0 bits (149), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 37/130 (28%), Positives = 59/130 (45%), Gaps = 25/130 (19%)
Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           +H  C++H DLKPEN+L+ S   +K+ D+  +       + F                  
Sbjct: 128 LHANCIVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALFP----------------- 170
Query: 65  YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAM 124
                   +V T  YRAPEV+L   +  P D+WSVGCI  E+   + LF  +   + L  
Sbjct: 171 --------VVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGK 222
Query: 125 MERVLGPLPQ 134
           +  ++G  P+
Sbjct: 223 IFDLIGLPPE 232

>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain Length = 331

Iteration: 1
 Score = 62.0 bits (149), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 41/135 (30%), Positives = 67/135 (49%), Gaps = 32/135 (23%)
Query: 6   HDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG-STT 64
           H   +IH D+KPEN+L+                            +S  +K+ DFG + T
Sbjct: 141 HSHNIIHRDIKPENILV---------------------------SQSGVVKLCDFGFART 173
Query: 65  YERPDQNYI--VSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHENLEH 121
              P + Y   V+TR YRAPE+++G + +    D+W++GC++ E+  GE LF    +++ 
Sbjct: 174 LAAPGEVYDDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQ 233
Query: 122 LAMMERVLGPL-PQH 135
           L  +   LG L P+H
Sbjct: 234 LYHIMMCLGNLIPRH 248

>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin Length = 306

Iteration: 1
 Score = 62.0 bits (149), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 38/130 (29%), Positives = 62/130 (47%), Gaps = 25/130 (19%)
Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           +H  C++H DLKPEN+L+ S   +K+ D+  +    +  SY   +               
Sbjct: 128 LHANCIVHRDLKPENILVTSGGTVKLADFGLA----RIYSYQMAL--------------- 168
Query: 65  YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAM 124
                 + +V T  YRAPEV+L   +  P D+WSVGCI  E+   + LF  +   + L  
Sbjct: 169 ------DPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGK 222
Query: 125 MERVLGPLPQ 134
           +  ++G  P+
Sbjct: 223 IFDLIGLPPE 232

>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With Ind E804 Length = 324

Iteration: 1
 Score = 61.6 bits (148), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 59/245 (24%), Positives = 95/245 (38%), Gaps = 73/245 (29%)
Query: 2   FAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG 61
            A  H   ++H DLKP+N+L+     +K+ D+               + ++ +I      
Sbjct: 113 LAYCHRQKVLHRDLKPQNLLINERGELKLADFG--------------LARAKSIP----- 153
Query: 62  STTYERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHENLE 120
           + TY+       V T  YR P+++LG   ++   D+W VGCI  E+ TG  LF      E
Sbjct: 154 TKTYDNE-----VVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTVEE 208
Query: 121 HLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVPFFY 180
            L  + R+LG   +                    WP G  S E                 
Sbjct: 209 QLHFIFRILGTPTEET------------------WP-GILSNE----------------- 232
Query: 181 GSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREAL 240
               EFK Y            +    ++ H      D   LL  LL+++  +R++A +A+
Sbjct: 233 ----EFKTY--------NYPKYRAEALLSHAPRLDSDGADLLTKLLQFEGRNRISAEDAM 280
Query: 241 RHPFF 245
           +HPFF
Sbjct: 281 KHPFF 285

>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase Erk1 Length = 382

Iteration: 1
 Score = 61.6 bits (148), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 60/251 (23%), Positives = 96/251 (38%), Gaps = 83/251 (33%)
Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           +H   ++H DLKP N+L+ ++                             +K+ DFG   
Sbjct: 160 IHSANVLHRDLKPSNLLINTT---------------------------CDLKICDFGLAR 192
Query: 65  YERPDQNYI------VSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHE 117
              P+ ++       V+TR YRAPE++L   G+T   DIWSVGCIL E+ +   +F    
Sbjct: 193 IADPEHDHTGFLTEXVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 252
Query: 118 NLEHLAMMERVLGPLPQHMLK-RVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQV 176
            L+ L  +  +LG   Q  L   ++  A  Y+              +S+ S  K+     
Sbjct: 253 YLDQLNHILGILGSPSQEDLNCIINMKARNYL--------------QSLPSKTKV----- 293
Query: 177 PFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTA 236
                       +   F  +D  A                    LL  +L ++P  R+T 
Sbjct: 294 -----------AWAKLFPKSDSKA------------------LDLLDRMLTFNPNKRITV 324
Query: 237 REALRHPFFTR 247
            EAL HP+  +
Sbjct: 325 EEALAHPYLEQ 335

>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin Length = 306

Iteration: 1
 Score = 61.6 bits (148), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 38/130 (29%), Positives = 61/130 (46%), Gaps = 25/130 (19%)
Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           +H  C++H DLKPEN+L+ S   +K+ D+  +        Y  +M  +            
Sbjct: 128 LHANCIVHRDLKPENILVTSGGTVKLADFGLA------RIYSYQMALAP----------- 170
Query: 65  YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAM 124
                   +V T  YRAPEV+L   +  P D+WSVGCI  E+   + LF  +   + L  
Sbjct: 171 --------VVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGK 222
Query: 125 MERVLGPLPQ 134
           +  ++G  P+
Sbjct: 223 IFDLIGLPPE 232

>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3 Length = 308

Iteration: 1
 Score = 61.6 bits (148), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 38/130 (29%), Positives = 61/130 (46%), Gaps = 25/130 (19%)
Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           +H  C++H DLKPEN+L+ S   +K+ D+  +        Y  +M  +            
Sbjct: 136 LHANCIVHRDLKPENILVTSGGTVKLADFGLA------RIYSYQMALTP----------- 178
Query: 65  YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAM 124
                   +V T  YRAPEV+L   +  P D+WSVGCI  E+   + LF  +   + L  
Sbjct: 179 --------VVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGK 230
Query: 125 MERVLGPLPQ 134
           +  ++G  P+
Sbjct: 231 IFDLIGLPPE 240

>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6 Bound To Amppnp Length = 576

Iteration: 1
 Score = 60.1 bits (144), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 38/140 (27%), Positives = 65/140 (46%), Gaps = 25/140 (17%)
Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           +H   +++ DLKPEN+LL    +I++ D   ++H P+                   G T 
Sbjct: 302 LHRERIVYRDLKPENILLDDHGHIRISDLGLAVHVPE-------------------GQTI 342
Query: 65  YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAM 124
             R      V T  Y APEV+    +T+  D W++GC+L E+  G++ FQ  +       
Sbjct: 343 KGR------VGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREE 396
Query: 125 MERVLGPLPQHMLKRVDRHA 144
           +ER++  +P+   +R    A
Sbjct: 397 VERLVKEVPEEYSERFSPQA 416

>pdb|3E3B|X Chain X, Crystal Structure Of Catalytic Subunit Of Human Protein Kinase Ck2alpha Prime With A Potent Indazole-Derivative Inhibitor Length = 339

Iteration: 1
 Score = 60.1 bits (144), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 55/244 (22%), Positives = 97/244 (39%), Gaps = 71/244 (29%)
Query: 6   HDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTY 65
           H   ++H D+KP NV++   +                            +++ID+G   +
Sbjct: 154 HSKGIMHRDVKPHNVMIDHQQ--------------------------KKLRLIDWGLAEF 187
Query: 66  ERPDQNYIV--STRHYRAPEVILGLG-WTYPCDIWSVGCILVELC-TGEALFQTHENLEH 121
             P Q Y V  ++R+++ PE+++    + Y  D+WS+GC+L  +    E  F   +N + 
Sbjct: 188 YHPAQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRREPFFHGQDNYDQ 247
Query: 122 LAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVPFFYG 181
           L  + +VLG                Y+++  +D                           
Sbjct: 248 LVRIAKVLGT----------EELYGYLKKYHIDLDP------------------------ 273
Query: 182 SFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALR 241
            F +  G     R  + I S  ++L+       + +   LL  LLRYD   RLTA+EA+ 
Sbjct: 274 HFNDILGQHSRKRWENFIHSENRHLV-------SPEALDLLDKLLRYDHQQRLTAKEAME 326
Query: 242 HPFF 245
           HP+F
Sbjct: 327 HPYF 330

>pdb|3OFM|A Chain A, Structure Of A Human Ck2alpha Prime, The Paralog Isoform Of The Catalytic Subunit Of Protein Kinase Ck2 From Homo Sapiens Length = 350

Iteration: 1
 Score = 60.1 bits (144), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 55/244 (22%), Positives = 97/244 (39%), Gaps = 71/244 (29%)
Query: 6   HDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTY 65
           H   ++H D+KP NV++   +                            +++ID+G   +
Sbjct: 149 HSKGIMHRDVKPHNVMIDHQQ--------------------------KKLRLIDWGLAEF 182
Query: 66  ERPDQNYIV--STRHYRAPEVILGLG-WTYPCDIWSVGCILVELC-TGEALFQTHENLEH 121
             P Q Y V  ++R+++ PE+++    + Y  D+WS+GC+L  +    E  F   +N + 
Sbjct: 183 YHPAQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRREPFFHGQDNYDQ 242
Query: 122 LAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVPFFYG 181
           L  + +VLG                Y+++  +D                           
Sbjct: 243 LVRIAKVLGT----------EELYGYLKKYHIDLDP------------------------ 268
Query: 182 SFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALR 241
            F +  G     R  + I S  ++L+       + +   LL  LLRYD   RLTA+EA+ 
Sbjct: 269 HFNDILGQHSRKRWENFIHSENRHLV-------SPEALDLLDKLLRYDHQQRLTAKEAME 321
Query: 242 HPFF 245
           HP+F
Sbjct: 322 HPYF 325

>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6 In Complex With Sangivamycin Length = 576

Iteration: 1
 Score = 60.1 bits (144), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 38/140 (27%), Positives = 65/140 (46%), Gaps = 25/140 (17%)
Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           +H   +++ DLKPEN+LL    +I++ D   ++H P+                   G T 
Sbjct: 302 LHRERIVYRDLKPENILLDDHGHIRISDLGLAVHVPE-------------------GQTI 342
Query: 65  YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAM 124
             R      V T  Y APEV+    +T+  D W++GC+L E+  G++ FQ  +       
Sbjct: 343 KGR------VGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREE 396
Query: 125 MERVLGPLPQHMLKRVDRHA 144
           +ER++  +P+   +R    A
Sbjct: 397 VERLVKEVPEEYSERFSPQA 416

>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With Sb203580 Length = 362

Iteration: 1
 Score = 58.9 bits (141), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 50/244 (20%), Positives = 92/244 (37%), Gaps = 74/244 (30%)
Query: 4   VMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGST 63
           V+H+  ++H DL P N+LL  +  I + D+  +     D+                    
Sbjct: 149 VLHEAGVVHRDLHPGNILLADNNDITICDFNLAREDTADA-------------------- 188
Query: 64  TYERPDQNYIVSTRHYRAPEVILGL-GWTYPCDIWSVGCILVELCTGEALFQTHENLEHL 122
                ++ + V+ R YRAPE+++   G+T   D+WS GC++ E+   +ALF+       L
Sbjct: 189 -----NKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQL 243
Query: 123 AMMERVLG-PLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVPFFYG 181
             +  V+G P  + ++      A  Y+R    + P                         
Sbjct: 244 NKIVEVVGTPKIEDVVMFSSPSARDYLRNSLSNVPA------------------------ 279
Query: 182 SFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALR 241
                + +       D +A                    L+  +L ++P  R++  +ALR
Sbjct: 280 -----RAWTAVVPTADPVA------------------LDLIAKMLEFNPQRRISTEQALR 316
Query: 242 HPFF 245
           HP+F
Sbjct: 317 HPYF 320

>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs Resolution) Length = 362

Iteration: 1
 Score = 58.9 bits (141), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 50/244 (20%), Positives = 92/244 (37%), Gaps = 74/244 (30%)
Query: 4   VMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGST 63
           V+H+  ++H DL P N+LL  +  I + D+  +     D+                    
Sbjct: 149 VLHEAGVVHRDLHPGNILLADNNDITICDFNLAREDTADA-------------------- 188
Query: 64  TYERPDQNYIVSTRHYRAPEVILGL-GWTYPCDIWSVGCILVELCTGEALFQTHENLEHL 122
                ++ + V+ R YRAPE+++   G+T   D+WS GC++ E+   +ALF+       L
Sbjct: 189 -----NKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQL 243
Query: 123 AMMERVLG-PLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVPFFYG 181
             +  V+G P  + ++      A  Y+R    + P                         
Sbjct: 244 NKIVEVVGTPKIEDVVMFSSPSARDYLRNSLSNVPA------------------------ 279
Query: 182 SFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALR 241
                + +       D +A                    L+  +L ++P  R++  +ALR
Sbjct: 280 -----RAWTAVVPTADPVA------------------LDLIAKMLEFNPQRRISTEQALR 316
Query: 242 HPFF 245
           HP+F
Sbjct: 317 HPYF 320

>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N- Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2 Length = 325

Iteration: 1
 Score = 58.5 bits (140), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 41/132 (31%), Positives = 59/132 (44%), Gaps = 24/132 (18%)
Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           +H L +I+ DLKPEN+LL    +IK+ D+  S    K+S              ID     
Sbjct: 142 LHSLGIIYRDLKPENILLDEEGHIKLTDFGLS----KES--------------IDHEKKA 183
Query: 65  YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAM 124
           Y          T  Y APEV+   G T   D WS G ++ E+ TG   FQ  +  E + M
Sbjct: 184 YS------FCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTM 237
Query: 125 MERVLGPLPQHM 136
           + +    +PQ +
Sbjct: 238 ILKAKLGMPQFL 249

>pdb|2PVH|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine Derivatives As Potent Inhibitors Of Protein Kinase Ck2 Length = 352

Iteration: 1
 Score = 58.5 bits (140), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 61/247 (24%), Positives = 100/247 (40%), Gaps = 73/247 (29%)
Query: 6   HDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTY 65
           H   ++H D+KP NV+ +  E  K                         +++ID+G   +
Sbjct: 163 HSQGIMHRDVKPHNVM-IDHELRK-------------------------LRLIDWGLAEF 196
Query: 66  ERPDQNYIV--STRHYRAPEVILGL-GWTYPCDIWSVGCILVELC-TGEALFQTHENLEH 121
             P + Y V  ++R+++ PE+++ L  + Y  D+WS+GC+   +    E  F  H+N + 
Sbjct: 197 YHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQ 256
Query: 122 LAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLD-WPEGAASRESIKSVMKLPRLQVPFFY 180
           L  + +VLG         ++ +  KY  R  LD   E    R S K  +K          
Sbjct: 257 LVKIAKVLGT------DGLNAYLNKY--RIELDPQLEALVGRHSRKPWLKF--------- 299
Query: 181 GSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREAL 240
                                   N   QH+   + +    L  LLRYD  +RLTA EA+
Sbjct: 300 -----------------------MNADNQHL--VSPEAIDFLDKLLRYDHQERLTALEAM 334
Query: 241 RHPFFTR 247
            HP+F +
Sbjct: 335 THPYFQQ 341

>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin Length = 305

Iteration: 1
 Score = 58.5 bits (140), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 41/132 (31%), Positives = 59/132 (44%), Gaps = 24/132 (18%)
Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           +H L +I+ DLKPEN+LL    +IK+ D+  S    K+S              ID     
Sbjct: 143 LHSLGIIYRDLKPENILLDEEGHIKLTDFGLS----KES--------------IDHEKKA 184
Query: 65  YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAM 124
           Y          T  Y APEV+   G T   D WS G ++ E+ TG   FQ  +  E + M
Sbjct: 185 YS------FCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTM 238
Query: 125 MERVLGPLPQHM 136
           + +    +PQ +
Sbjct: 239 ILKAKLGMPQFL 250

>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex With Flavonoid Glycoside Sl0101 Length = 304

Iteration: 1
 Score = 58.5 bits (140), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 41/132 (31%), Positives = 59/132 (44%), Gaps = 24/132 (18%)
Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           +H L +I+ DLKPEN+LL    +IK+ D+  S    K+S              ID     
Sbjct: 142 LHSLGIIYRDLKPENILLDEEGHIKLTDFGLS----KES--------------IDHEKKA 183
Query: 65  YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAM 124
           Y          T  Y APEV+   G T   D WS G ++ E+ TG   FQ  +  E + M
Sbjct: 184 YS------FCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTM 237
Query: 125 MERVLGPLPQHM 136
           + +    +PQ +
Sbjct: 238 ILKAKLGMPQFL 249

>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei, Pb000659.00.0 Length = 432

Iteration: 1
 Score = 58.5 bits (140), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 66/255 (25%), Positives = 107/255 (41%), Gaps = 48/255 (18%)
Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDY--KSSLHTPKDSSYFKRMPKSSA----IKVI 58
           +H+  +IH DLKP N LL     +KV D+    ++++ KD++    + ++       K +
Sbjct: 145 IHESGIIHRDLKPANCLLNQDCSVKVCDFGLARTINSEKDTNIVNDLEENEEPGPHNKNL 204
Query: 59  DFGSTTYERPDQNYIVSTRHYRAPEVI-LGLGWTYPCDIWSVGCILVELCTGEALFQTHE 117
               T++        V TR YRAPE+I L   +T   DIWS GCI  EL     + Q+H 
Sbjct: 205 KKQLTSH--------VVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLN---MLQSHI 253
Query: 118 NLEHLAMMERV-LGPLPQHMLKRVDRHAEKYVRRGRLDWPE------GAASRESIKSVMK 170
           N        R  L P         DR+++K   +   D         G  + + +K++ K
Sbjct: 254 N----DPTNRFPLFPGSSCFPLSPDRNSKKVHEKSNRDQLNIIFNIIGTPTEDDLKNINK 309
Query: 171 LPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDP 230
                         E   Y   F     I       + Q     + D  +LL+ +L+++P
Sbjct: 310 -------------PEVIKYIKLFPHRKPIN------LKQKYPSISDDGINLLESMLKFNP 350
Query: 231 TDRLTAREALRHPFF 245
             R+T  +AL HP+ 
Sbjct: 351 NKRITIDQALDHPYL 365

>pdb|2QC6|A Chain A, Protein Kinase Ck2 In Complex With Dbc Length = 332

Iteration: 1
 Score = 58.2 bits (139), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 61/247 (24%), Positives = 100/247 (40%), Gaps = 73/247 (29%)
Query: 6   HDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTY 65
           H   ++H D+KP NV+ +  E  K                         +++ID+G   +
Sbjct: 143 HSQGIMHRDVKPHNVM-IDHELRK-------------------------LRLIDWGLAEF 176
Query: 66  ERPDQNYIV--STRHYRAPEVILGL-GWTYPCDIWSVGCILVELC-TGEALFQTHENLEH 121
             P + Y V  ++R+++ PE+++ L  + Y  D+WS+GC+   +    E  F  H+N + 
Sbjct: 177 YHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQ 236
Query: 122 LAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLD-WPEGAASRESIKSVMKLPRLQVPFFY 180
           L  + +VLG         ++ +  KY  R  LD   E    R S K  +K          
Sbjct: 237 LVKIAKVLGT------DGLNVYLNKY--RIELDPQLEALVGRHSRKPWLKF--------- 279
Query: 181 GSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREAL 240
                                   N   QH+   + +    L  LLRYD  +RLTA EA+
Sbjct: 280 -----------------------MNADNQHL--VSPEAIDFLDKLLRYDHQERLTALEAM 314
Query: 241 RHPFFTR 247
            HP+F +
Sbjct: 315 THPYFQQ 321

>pdb|1M2P|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro- AnthraquinoneCK2 KINASE COMPLEX Length = 325

Iteration: 1
 Score = 58.2 bits (139), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 61/247 (24%), Positives = 100/247 (40%), Gaps = 73/247 (29%)
Query: 6   HDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTY 65
           H   ++H D+KP NV+ +  E  K                         +++ID+G   +
Sbjct: 142 HSQGIMHRDVKPHNVM-IDHELRK-------------------------LRLIDWGLAEF 175
Query: 66  ERPDQNYIV--STRHYRAPEVILGL-GWTYPCDIWSVGCILVELC-TGEALFQTHENLEH 121
             P + Y V  ++R+++ PE+++ L  + Y  D+WS+GC+   +    E  F  H+N + 
Sbjct: 176 YHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQ 235
Query: 122 LAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLD-WPEGAASRESIKSVMKLPRLQVPFFY 180
           L  + +VLG         ++ +  KY  R  LD   E    R S K  +K          
Sbjct: 236 LVKIAKVLGT------DGLNVYLNKY--RIELDPQLEALVGRHSRKPWLKF--------- 278
Query: 181 GSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREAL 240
                                   N   QH+   + +    L  LLRYD  +RLTA EA+
Sbjct: 279 -----------------------MNADNQHL--VSPEAIDFLDKLLRYDHQERLTALEAM 313
Query: 241 RHPFFTR 247
            HP+F +
Sbjct: 314 THPYFQQ 320

>pdb|4DGN|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The Inhibitor Luteolin Length = 326

Iteration: 1
 Score = 58.2 bits (139), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 61/247 (24%), Positives = 100/247 (40%), Gaps = 73/247 (29%)
Query: 6   HDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTY 65
           H   ++H D+KP NV+ +  E  K                         +++ID+G   +
Sbjct: 142 HSQGIMHRDVKPHNVM-IDHELRK-------------------------LRLIDWGLAEF 175
Query: 66  ERPDQNYIV--STRHYRAPEVILGL-GWTYPCDIWSVGCILVELC-TGEALFQTHENLEH 121
             P + Y V  ++R+++ PE+++ L  + Y  D+WS+GC+   +    E  F  H+N + 
Sbjct: 176 YHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQ 235
Query: 122 LAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLD-WPEGAASRESIKSVMKLPRLQVPFFY 180
           L  + +VLG         ++ +  KY  R  LD   E    R S K  +K          
Sbjct: 236 LVKIAKVLGT------DGLNVYLNKY--RIELDPQLEALVGRHSRKPWLKF--------- 278
Query: 181 GSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREAL 240
                                   N   QH+   + +    L  LLRYD  +RLTA EA+
Sbjct: 279 -----------------------MNADNQHL--VSPEAIDFLDKLLRYDHQERLTALEAM 313
Query: 241 RHPFFTR 247
            HP+F +
Sbjct: 314 THPYFQQ 320

>pdb|4DGM|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The Inhibitor Apigenin Length = 326

Iteration: 1
 Score = 58.2 bits (139), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 61/247 (24%), Positives = 100/247 (40%), Gaps = 73/247 (29%)
Query: 6   HDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTY 65
           H   ++H D+KP NV+ +  E  K                         +++ID+G   +
Sbjct: 142 HSQGIMHRDVKPHNVM-IDHELRK-------------------------LRLIDWGLAEF 175
Query: 66  ERPDQNYIV--STRHYRAPEVILGL-GWTYPCDIWSVGCILVELC-TGEALFQTHENLEH 121
             P + Y V  ++R+++ PE+++ L  + Y  D+WS+GC+   +    E  F  H+N + 
Sbjct: 176 YHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQ 235
Query: 122 LAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLD-WPEGAASRESIKSVMKLPRLQVPFFY 180
           L  + +VLG         ++ +  KY  R  LD   E    R S K  +K          
Sbjct: 236 LVKIAKVLGT------DGLNVYLNKY--RIELDPQLEALVGRHSRKPWLKF--------- 278
Query: 181 GSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREAL 240
                                   N   QH+   + +    L  LLRYD  +RLTA EA+
Sbjct: 279 -----------------------MNADNQHL--VSPEAIDFLDKLLRYDHQERLTALEAM 313
Query: 241 RHPFFTR 247
            HP+F +
Sbjct: 314 THPYFQQ 320

>pdb|1DS5|A Chain A, Dimeric Crystal Structure Of The Alpha Subunit In Complex With Two Beta Peptides Mimicking The Architecture Of The Tetrameric Protein Kinase Ck2 Holoenzyme. Length = 332

Iteration: 1
 Score = 58.2 bits (139), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 61/247 (24%), Positives = 100/247 (40%), Gaps = 73/247 (29%)
Query: 6   HDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTY 65
           H   ++H D+KP NV+ +  E  K                         +++ID+G   +
Sbjct: 143 HSQGIMHRDVKPHNVM-IDHELRK-------------------------LRLIDWGLAEF 176
Query: 66  ERPDQNYIV--STRHYRAPEVILGL-GWTYPCDIWSVGCILVELC-TGEALFQTHENLEH 121
             P + Y V  ++R+++ PE+++ L  + Y  D+WS+GC+   +    E  F  H+N + 
Sbjct: 177 YHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQ 236
Query: 122 LAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLD-WPEGAASRESIKSVMKLPRLQVPFFY 180
           L  + +VLG         ++ +  KY  R  LD   E    R S K  +K          
Sbjct: 237 LVKIAKVLGT------DGLNVYLNKY--RIELDPQLEALVGRHSRKPWLKF--------- 279
Query: 181 GSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREAL 240
                                   N   QH+   + +    L  LLRYD  +RLTA EA+
Sbjct: 280 -----------------------MNADNQHL--VSPEAIDFLDKLLRYDHQERLTALEAM 314
Query: 241 RHPFFTR 247
            HP+F +
Sbjct: 315 THPYFQQ 321

>pdb|4ANM|A Chain A, Complex Of Ck2 With A Cdc7 Inhibitor Length = 335

Iteration: 1
 Score = 58.2 bits (139), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 61/247 (24%), Positives = 100/247 (40%), Gaps = 73/247 (29%)
Query: 6   HDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTY 65
           H   ++H D+KP NV+ +  E  K                         +++ID+G   +
Sbjct: 144 HSQGIMHRDVKPHNVM-IDHELRK-------------------------LRLIDWGLAEF 177
Query: 66  ERPDQNYIV--STRHYRAPEVILGL-GWTYPCDIWSVGCILVELC-TGEALFQTHENLEH 121
             P + Y V  ++R+++ PE+++ L  + Y  D+WS+GC+   +    E  F  H+N + 
Sbjct: 178 YHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQ 237
Query: 122 LAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLD-WPEGAASRESIKSVMKLPRLQVPFFY 180
           L  + +VLG         ++ +  KY  R  LD   E    R S K  +K          
Sbjct: 238 LVKIAKVLGT------DGLNVYLNKY--RIELDPQLEALVGRHSRKPWLKF--------- 280
Query: 181 GSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREAL 240
                                   N   QH+   + +    L  LLRYD  +RLTA EA+
Sbjct: 281 -----------------------MNADNQHL--VSPEAIDFLDKLLRYDHQERLTALEAM 315
Query: 241 RHPFFTR 247
            HP+F +
Sbjct: 316 THPYFQQ 322

>pdb|3PVG|A Chain A, Crystal Structure Of Z. Mays Ck2 Alpha Subunit In Complex With The Inhibitor 4,5,6,7-Tetrabromo-1-Carboxymethylbenzimidazole (K68) Length = 331

Iteration: 1
 Score = 58.2 bits (139), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 61/247 (24%), Positives = 100/247 (40%), Gaps = 73/247 (29%)
Query: 6   HDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTY 65
           H   ++H D+KP NV+ +  E  K                         +++ID+G   +
Sbjct: 142 HSQGIMHRDVKPHNVM-IDHELRK-------------------------LRLIDWGLAEF 175
Query: 66  ERPDQNYIV--STRHYRAPEVILGL-GWTYPCDIWSVGCILVELC-TGEALFQTHENLEH 121
             P + Y V  ++R+++ PE+++ L  + Y  D+WS+GC+   +    E  F  H+N + 
Sbjct: 176 YHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQ 235
Query: 122 LAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLD-WPEGAASRESIKSVMKLPRLQVPFFY 180
           L  + +VLG         ++ +  KY  R  LD   E    R S K  +K          
Sbjct: 236 LVKIAKVLGT------DGLNVYLNKY--RIELDPQLEALVGRHSRKPWLKF--------- 278
Query: 181 GSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREAL 240
                                   N   QH+   + +    L  LLRYD  +RLTA EA+
Sbjct: 279 -----------------------MNADNQHL--VSPEAIDFLDKLLRYDHQERLTALEAM 313
Query: 241 RHPFFTR 247
            HP+F +
Sbjct: 314 THPYFQQ 320

>pdb|3KXG|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In Complex With The Inhibitor 3,4,5,6,7-Pentabromo-1h-Indazole (K64) Length = 327

Iteration: 1
 Score = 58.2 bits (139), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 61/247 (24%), Positives = 100/247 (40%), Gaps = 73/247 (29%)
Query: 6   HDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTY 65
           H   ++H D+KP NV+ +  E  K                         +++ID+G   +
Sbjct: 142 HSQGIMHRDVKPHNVM-IDHELRK-------------------------LRLIDWGLAEF 175
Query: 66  ERPDQNYIV--STRHYRAPEVILGL-GWTYPCDIWSVGCILVELC-TGEALFQTHENLEH 121
             P + Y V  ++R+++ PE+++ L  + Y  D+WS+GC+   +    E  F  H+N + 
Sbjct: 176 YHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQ 235
Query: 122 LAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLD-WPEGAASRESIKSVMKLPRLQVPFFY 180
           L  + +VLG         ++ +  KY  R  LD   E    R S K  +K          
Sbjct: 236 LVKIAKVLGT------DGLNVYLNKY--RIELDPQLEALVGRHSRKPWLKF--------- 278
Query: 181 GSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREAL 240
                                   N   QH+   + +    L  LLRYD  +RLTA EA+
Sbjct: 279 -----------------------MNADNQHL--VSPEAIDFLDKLLRYDHQERLTALEAM 313
Query: 241 RHPFFTR 247
            HP+F +
Sbjct: 314 THPYFQQ 320

>pdb|1DAW|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase Ck2 (Alpha-Subunit) And Mg-Amppnp Length = 327

Iteration: 1
 Score = 57.8 bits (138), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 61/247 (24%), Positives = 100/247 (40%), Gaps = 73/247 (29%)
Query: 6   HDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTY 65
           H   ++H D+KP NV+ +  E  K                         +++ID+G   +
Sbjct: 142 HSQGIMHRDVKPHNVM-IDHELRK-------------------------LRLIDWGLAEF 175
Query: 66  ERPDQNYIV--STRHYRAPEVILGL-GWTYPCDIWSVGCILVELC-TGEALFQTHENLEH 121
             P + Y V  ++R+++ PE+++ L  + Y  D+WS+GC+   +    E  F  H+N + 
Sbjct: 176 YHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQ 235
Query: 122 LAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLD-WPEGAASRESIKSVMKLPRLQVPFFY 180
           L  + +VLG         ++ +  KY  R  LD   E    R S K  +K          
Sbjct: 236 LVKIAKVLGT------DGLNVYLNKY--RIELDPQLEALVGRHSRKPWLKF--------- 278
Query: 181 GSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREAL 240
                                   N   QH+   + +    L  LLRYD  +RLTA EA+
Sbjct: 279 -----------------------MNADNQHL--VSPEAIDFLDKLLRYDHQERLTALEAM 313
Query: 241 RHPFFTR 247
            HP+F +
Sbjct: 314 THPYFQQ 320

>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human Rsk-1 Bound To Amp-Pcp Length = 321

Iteration: 1
 Score = 56.6 bits (135), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 37/132 (28%), Positives = 58/132 (43%), Gaps = 24/132 (18%)
Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           +H L +I+ DLKPEN+LL    +IK+ D+  S                   + ID     
Sbjct: 146 LHSLGIIYRDLKPENILLDEEGHIKLTDFGLS------------------KEAIDHEKKA 187
Query: 65  YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAM 124
           Y          T  Y APEV+   G ++  D WS G ++ E+ TG   FQ  +  E + +
Sbjct: 188 YS------FCGTVEYMAPEVVNRQGHSHSADWWSYGVLMFEMLTGSLPFQGKDRKETMTL 241
Query: 125 MERVLGPLPQHM 136
           + +    +PQ +
Sbjct: 242 ILKAKLGMPQFL 253

>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii, Tgme49_101440, In Presence Of Calcium Length = 508

Iteration: 1
 Score = 56.6 bits (135), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 42/148 (28%), Positives = 64/148 (43%), Gaps = 27/148 (18%)
Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           MH   ++H DLKPEN+LL S                          K + I++IDFG +T
Sbjct: 166 MHKNKIVHRDLKPENLLLESK------------------------SKDANIRIIDFGLST 201
Query: 65  YERPDQNY--IVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHL 122
           +    +     + T +Y APEV+ G  +   CD+WS G IL  L +G   F      + L
Sbjct: 202 HFEASKKMKDKIGTAYYIAPEVLHGT-YDEKCDVWSTGVILYILLSGCPPFNGANEYDIL 260
Query: 123 AMMERVLGPLPQHMLKRVDRHAEKYVRR 150
             +E+          K+V   A+  +R+
Sbjct: 261 KKVEKGKYTFELPQWKKVSESAKDLIRK 288

>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii (Tgcdpk1) Length = 484

Iteration: 1
 Score = 56.6 bits (135), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 45/150 (30%), Positives = 67/150 (44%), Gaps = 31/150 (20%)
Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           MH   ++H DLKPEN+LL S                          K + I++IDFG +T
Sbjct: 142 MHKNKIVHRDLKPENLLLESK------------------------SKDANIRIIDFGLST 177
Query: 65  YERPDQNY--IVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHL 122
           +    +     + T +Y APEV+ G  +   CD+WS G IL  L +G   F      + L
Sbjct: 178 HFEASKKMKDKIGTAYYIAPEVLHGT-YDEKCDVWSTGVILYILLSGCPPFNGANEYDIL 236
Query: 123 AMME--RVLGPLPQHMLKRVDRHAEKYVRR 150
             +E  +    LPQ   K+V   A+  +R+
Sbjct: 237 KKVEKGKYTFELPQ--WKKVSESAKDLIRK 264

>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence Of 3brb-Pp1 Length = 298

Iteration: 1
 Score = 56.6 bits (135), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 42/148 (28%), Positives = 64/148 (43%), Gaps = 27/148 (18%)
Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           MH   ++H DLKPEN+LL S                          K + I++IDFG +T
Sbjct: 148 MHKNKIVHRDLKPENLLLESK------------------------SKDANIRIIDFGLST 183
Query: 65  YERPDQNY--IVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHL 122
           +    +     + T +Y APEV+ G  +   CD+WS G IL  L +G   F      + L
Sbjct: 184 HFEASKKMKDKIGTAYYIAPEVLHGT-YDEKCDVWSTGVILYILLSGCPPFNGANEYDIL 242
Query: 123 AMMERVLGPLPQHMLKRVDRHAEKYVRR 150
             +E+          K+V   A+  +R+
Sbjct: 243 KKVEKGKYTFELPQWKKVSESAKDLIRK 270

>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From Toxoplasma Gondii, Tgme49.101440 Length = 507

Iteration: 1
 Score = 56.6 bits (135), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 42/148 (28%), Positives = 64/148 (43%), Gaps = 27/148 (18%)
Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           MH   ++H DLKPEN+LL S                          K + I++IDFG +T
Sbjct: 165 MHKNKIVHRDLKPENLLLESK------------------------SKDANIRIIDFGLST 200
Query: 65  YERPDQNY--IVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHL 122
           +    +     + T +Y APEV+ G  +   CD+WS G IL  L +G   F      + L
Sbjct: 201 HFEASKKMKDKIGTAYYIAPEVLHGT-YDEKCDVWSTGVILYILLSGCPPFNGANEYDIL 259
Query: 123 AMMERVLGPLPQHMLKRVDRHAEKYVRR 150
             +E+          K+V   A+  +R+
Sbjct: 260 KKVEKGKYTFELPQWKKVSESAKDLIRK 287

>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1, Cgd3_920 Length = 486

Iteration: 1
 Score = 56.2 bits (134), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 37/107 (34%), Positives = 49/107 (45%), Gaps = 27/107 (25%)
Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           MH   ++H DLKPEN+LL S E                        K   IK+IDFG +T
Sbjct: 137 MHKHNIVHRDLKPENILLESKE------------------------KDCDIKIIDFGLST 172
Query: 65  --YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG 109
              +       + T +Y APEV+ G  +   CD+WS G IL  L +G
Sbjct: 173 CFQQNTKMKDRIGTAYYIAPEVLRGT-YDEKCDVWSAGVILYILLSG 218

>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein Kinase Domain Length = 387

Iteration: 1
 Score = 55.8 bits (133), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 34/148 (22%), Positives = 66/148 (44%), Gaps = 27/148 (18%)
Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           MH+  ++H D+KPEN++  +                          K+S++K+IDFG  T
Sbjct: 165 MHEHSIVHLDIKPENIMCETK-------------------------KASSVKIIDFGLAT 199
Query: 65  YERPDQ--NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHL 122
              PD+      +T  + APE++      +  D+W++G +   L +G + F   ++LE L
Sbjct: 200 KLNPDEIVKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLETL 259
Query: 123 AMMERVLGPLPQHMLKRVDRHAEKYVRR 150
             ++R      +     V   A+ +++ 
Sbjct: 260 QNVKRCDWEFDEDAFSSVSPEAKDFIKN 287

>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By Roscovitine, Aloisine And Indirubin. Length = 292

Iteration: 1
 Score = 55.8 bits (133), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 57/243 (23%), Positives = 100/243 (41%), Gaps = 75/243 (30%)
Query: 6   HDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTY 65
           H   ++H DLKP+N+L+  +  +K+ ++               + ++  I V  + +   
Sbjct: 118 HSRNVLHRDLKPQNLLINRNGELKLANFG--------------LARAFGIPVRCYSAE-- 161
Query: 66  ERPDQNYIVSTRHYRAPEVILGLG-WTYPCDIWSVGCILVELCT-GEALFQTHENLEHLA 123
                   V T  YR P+V+ G   ++   D+WS GCI  EL   G  LF  ++  + L 
Sbjct: 162 --------VVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLK 213
Query: 124 MMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVPFFYGSF 183
            + R+LG   +                    WP          S+ KLP           
Sbjct: 214 RIFRLLGTPTEEQ------------------WP----------SMTKLP----------- 234
Query: 184 VEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHP 243
            ++K Y +    T  +       ++  ++ +  D   LLQ LL+ +P  R++A EAL+HP
Sbjct: 235 -DYKPYPMYPATTSLVN------VVPKLNATGRD---LLQNLLKCNPVQRISAEEALQHP 284
Query: 244 FFT 246
           +F+
Sbjct: 285 YFS 287

>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent Protein Kinase Cgd3_920 From Cryptosporidium Parvum Length = 286

Iteration: 1
 Score = 55.5 bits (132), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 43/134 (32%), Positives = 58/134 (43%), Gaps = 29/134 (21%)
Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           MH   ++H DLKPEN+LL S E                        K   IK+IDFG +T
Sbjct: 137 MHKHNIVHRDLKPENILLESKE------------------------KDCDIKIIDFGLST 172
Query: 65  --YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHL 122
              +       + T +Y APEV+ G  +   CD+WS G IL  L +G   F      + L
Sbjct: 173 CFQQNTKMKDRIGTAYYIAPEVLRGT-YDEKCDVWSAGVILYILLSGTPPFYGKNEYDIL 231
Query: 123 AMME--RVLGPLPQ 134
             +E  +    LPQ
Sbjct: 232 KRVETGKYAFDLPQ 245

>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium Parvum Calcium Dependent Protein Kinase In Complex With 3- Mb-Pp1 Length = 287

Iteration: 1
 Score = 55.5 bits (132), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 43/134 (32%), Positives = 58/134 (43%), Gaps = 29/134 (21%)
Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           MH   ++H DLKPEN+LL S E                        K   IK+IDFG +T
Sbjct: 137 MHKHNIVHRDLKPENILLESKE------------------------KDCDIKIIDFGLST 172
Query: 65  --YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHL 122
              +       + T +Y APEV+ G  +   CD+WS G IL  L +G   F      + L
Sbjct: 173 CFQQNTKMKDRIGTAYYIAPEVLRGT-YDEKCDVWSAGVILYILLSGTPPFYGKNEYDIL 231
Query: 123 AMME--RVLGPLPQ 134
             +E  +    LPQ
Sbjct: 232 KRVETGKYAFDLPQ 245

>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex Length = 292

Iteration: 1
 Score = 55.1 bits (131), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 57/243 (23%), Positives = 99/243 (40%), Gaps = 75/243 (30%)
Query: 6   HDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTY 65
           H   ++H DLKP+N+L+  +  +K+ D+               + ++  I V  + +   
Sbjct: 118 HSRNVLHRDLKPQNLLINRNGELKLADFG--------------LARAFGIPVRCYSAE-- 161
Query: 66  ERPDQNYIVSTRHYRAPEVILGLG-WTYPCDIWSVGCILVELCT-GEALFQTHENLEHLA 123
                   V T  YR P+V+ G   ++   D+WS GCI  EL      LF  ++  + L 
Sbjct: 162 --------VVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAARPLFPGNDVDDQLK 213
Query: 124 MMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVPFFYGSF 183
            + R+LG   +                    WP          S+ KLP           
Sbjct: 214 RIFRLLGTPTEEQ------------------WP----------SMTKLP----------- 234
Query: 184 VEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHP 243
            ++K Y +    T  +       ++  ++ +  D   LLQ LL+ +P  R++A EAL+HP
Sbjct: 235 -DYKPYPMYPATTSLVN------VVPKLNATGRD---LLQNLLKCNPVQRISAEEALQHP 284
Query: 244 FFT 246
           +F+
Sbjct: 285 YFS 287

>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5 Length = 317

Iteration: 1
 Score = 54.7 bits (130), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 43/153 (28%), Positives = 66/153 (43%), Gaps = 30/153 (19%)
Query: 2   FAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG 61
            + +H+  +IH D+K +++LL S   IK+ D+       K                    
Sbjct: 154 LSYLHNQGVIHRDIKSDSILLTSDGRIKLSDFGFCAQVSK-------------------- 193
Query: 62  STTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEH 121
               E P +  +V T ++ APEVI  L +    DIWS+G +++E+  GE     + N   
Sbjct: 194 ----EVPKRKXLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGEP---PYFNEPP 246
Query: 122 LAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLD 154
           L  M R+   LP  +    D H    V RG LD
Sbjct: 247 LQAMRRIRDSLPPRV---KDLHKVSSVLRGFLD 276

>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii (Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2 Length = 484

Iteration: 1
 Score = 54.3 bits (129), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 41/147 (27%), Positives = 63/147 (42%), Gaps = 27/147 (18%)
Query: 6   HDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTY 65
           H   ++H DLKPEN+LL S                          K + I++IDFG +T+
Sbjct: 143 HKNKIVHRDLKPENLLLESK------------------------SKDANIRIIDFGLSTH 178
Query: 66  ERPDQNY--IVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLA 123
               +     + T +Y APEV+ G  +   CD+WS G IL  L +G   F      + L 
Sbjct: 179 FEASKKXKDKIGTAYYIAPEVLHGT-YDEKCDVWSTGVILYILLSGCPPFNGANEYDILK 237
Query: 124 MMERVLGPLPQHMLKRVDRHAEKYVRR 150
            +E+          K+V   A+  +R+
Sbjct: 238 KVEKGKYTFELPQWKKVSESAKDLIRK 264

>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia Length = 329

Iteration: 1
 Score = 53.9 bits (128), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 59/242 (24%), Positives = 92/242 (38%), Gaps = 74/242 (30%)
Query: 11  IHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG-STTYERPD 69
           +H DLKP+N+LL  S+  + P                       +K+ DFG +  +  P 
Sbjct: 154 LHRDLKPQNLLLSVSDASETP----------------------VLKIGDFGLARAFGIPI 191
Query: 70  QNYI--VSTRHYRAPEVILGLG-WTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMME 126
           + +   + T  YR PE++LG   ++   DIWS+ CI  E+     LF     ++ L  + 
Sbjct: 192 RQFTHEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSEIDQLFKIF 251
Query: 127 RVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVPFFYGSFVEF 186
            VLG LP                     WP   A               +P +  SF +F
Sbjct: 252 EVLG-LPDDT-----------------TWPGVTA---------------LPDWKQSFPKF 278
Query: 187 KGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFT 246
           +G  L  R    +                     LL  +L  DP  R++A+ AL HP+F+
Sbjct: 279 RGKTLK-RVLGALLDDEG--------------LDLLTAMLEMDPVKRISAKNALEHPYFS 323
Query: 247 RD 248
            +
Sbjct: 324 HN 325

>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain Kinase Loc340156. Length = 373

Iteration: 1
 Score = 53.9 bits (128), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 38/148 (25%), Positives = 65/148 (43%), Gaps = 27/148 (18%)
Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           MH + ++H DLKPEN+L V+ +                         +  IK+IDFG   
Sbjct: 203 MHQMYILHLDLKPENILCVNRD-------------------------AKQIKIIDFGLAR 237
Query: 65  YERPDQNYIVS--TRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHL 122
             +P +   V+  T  + APEV+     ++P D+WSVG I   L +G + F    + E L
Sbjct: 238 RYKPREKLKVNFGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDNDAETL 297
Query: 123 AMMERVLGPLPQHMLKRVDRHAEKYVRR 150
             +      L     + +   A++++ +
Sbjct: 298 NNILACRWDLEDEEFQDISEEAKEFISK 325

>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In Complex With Ca2+ And Amppnp Length = 494

Iteration: 1
 Score = 53.9 bits (128), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 40/125 (32%), Positives = 57/125 (45%), Gaps = 27/125 (21%)
Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG-ST 63
           +H   ++H DLKPEN+LL S E                        K + IK++DFG S 
Sbjct: 152 LHKHNIVHRDLKPENLLLESKE------------------------KDALIKIVDFGLSA 187
Query: 64  TYERPDQ-NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHL 122
            +E   +    + T +Y APEV L   +   CD+WS+G IL  L  G   F    + E L
Sbjct: 188 VFENQKKMKERLGTAYYIAPEV-LRKKYDEKCDVWSIGVILFILLAGYPPFGGQTDQEIL 246
Query: 123 AMMER 127
             +E+
Sbjct: 247 RKVEK 251

>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated Protein Kinase And Immunoglobulin Domains Length = 491

Iteration: 1
 Score = 53.5 bits (127), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 37/148 (25%), Positives = 63/148 (42%), Gaps = 27/148 (18%)
Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           MH+   +H DLKPEN++  +                          +S+ +K+IDFG T 
Sbjct: 165 MHENNYVHLDLKPENIMFTTK-------------------------RSNELKLIDFGLTA 199
Query: 65  YERPDQNYIVST--RHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHL 122
           +  P Q+  V+T    + APEV  G    Y  D+WSVG +   L +G + F    + E L
Sbjct: 200 HLDPKQSVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETL 259
Query: 123 AMMERVLGPLPQHMLKRVDRHAEKYVRR 150
             ++     +       +    + ++R+
Sbjct: 260 RNVKSCDWNMDDSAFSGISEDGKDFIRK 287

>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans (Fn31-Nl-Kin-Crd-Ig26) Length = 573

Iteration: 1
 Score = 53.5 bits (127), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 37/148 (25%), Positives = 63/148 (42%), Gaps = 27/148 (18%)
Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           MH+   +H DLKPEN++  +                          +S+ +K+IDFG T 
Sbjct: 271 MHENNYVHLDLKPENIMFTTK-------------------------RSNELKLIDFGLTA 305
Query: 65  YERPDQNYIVST--RHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHL 122
           +  P Q+  V+T    + APEV  G    Y  D+WSVG +   L +G + F    + E L
Sbjct: 306 HLDPKQSVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETL 365
Query: 123 AMMERVLGPLPQHMLKRVDRHAEKYVRR 150
             ++     +       +    + ++R+
Sbjct: 366 RNVKSCDWNMDDSAFSGISEDGKDFIRK 393

>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With Inhibitor Jnj- 7706621 Length = 351

Iteration: 1
 Score = 53.1 bits (126), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 33/108 (30%), Positives = 49/108 (45%), Gaps = 27/108 (25%)
Query: 2   FAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG 61
           F  +H L +I+ DLKPEN+L+    YIKV D+           + KR+           G
Sbjct: 155 FEYLHSLDLIYRDLKPENLLIDQQGYIKVADF----------GFAKRVK----------G 194
Query: 62  STTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG 109
            T         +  T  Y APE+IL  G+    D W++G ++ E+  G
Sbjct: 195 RTWX-------LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235

>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With Y- 27632 Length = 350

Iteration: 1
 Score = 53.1 bits (126), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 33/108 (30%), Positives = 49/108 (45%), Gaps = 27/108 (25%)
Query: 2   FAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG 61
           F  +H L +I+ DLKPEN+L+    YIKV D+           + KR+           G
Sbjct: 154 FEYLHSLDLIYRDLKPENLLIDQQGYIKVADF----------GFAKRVK----------G 193
Query: 62  STTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG 109
            T         +  T  Y APE+IL  G+    D W++G ++ E+  G
Sbjct: 194 RTWX-------LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234

>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase Length = 350

Iteration: 1
 Score = 53.1 bits (126), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 33/108 (30%), Positives = 49/108 (45%), Gaps = 27/108 (25%)
Query: 2   FAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG 61
           F  +H L +I+ DLKPEN+L+    YIKV D+           + KR+           G
Sbjct: 154 FEYLHSLDLIYRDLKPENLLIDQQGYIKVADF----------GFAKRVK----------G 193
Query: 62  STTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG 109
            T         +  T  Y APE+IL  G+    D W++G ++ E+  G
Sbjct: 194 RTWX-------LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234

>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632 Length = 350

Iteration: 1
 Score = 53.1 bits (126), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 33/108 (30%), Positives = 49/108 (45%), Gaps = 27/108 (25%)
Query: 2   FAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG 61
           F  +H L +I+ DLKPEN+L+    YIKV D+           + KR+           G
Sbjct: 154 FEYLHSLDLIYRDLKPENLLIDQQGYIKVADF----------GFAKRVK----------G 193
Query: 62  STTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG 109
            T         +  T  Y APE+IL  G+    D W++G ++ E+  G
Sbjct: 194 RTWX-------LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234

>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And Regulatory (Ri{alpha}) Subunits Of Pka Length = 350

Iteration: 1
 Score = 52.8 bits (125), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 32/108 (29%), Positives = 49/108 (45%), Gaps = 27/108 (25%)
Query: 2   FAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG 61
           F  +H L +I+ DLKPEN+L+    YI+V D+           + KR+           G
Sbjct: 154 FEYLHSLDLIYRDLKPENLLIDQQGYIQVTDF----------GFAKRVK----------G 193
Query: 62  STTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG 109
            T         +  T  Y APE+IL  G+    D W++G ++ E+  G
Sbjct: 194 RTWX-------LAGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234

>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent Protein Kinase With Unphosphorylated Activation Loop Length = 371

Iteration: 1
 Score = 52.8 bits (125), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 30/108 (27%), Positives = 49/108 (45%), Gaps = 27/108 (25%)
Query: 2   FAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG 61
           F  +H L +I+ DLKPEN+L+    YI+V D+           + KR+  ++        
Sbjct: 175 FEYLHSLDLIYRDLKPENLLIDQQGYIQVTDF----------GFAKRVKGATWT------ 218
Query: 62  STTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG 109
                      +  T  Y APE+IL  G+    D W++G ++ E+  G
Sbjct: 219 -----------LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 255

>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein Kinase Catalytic Subunit Length = 350

Iteration: 1
 Score = 52.4 bits (124), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 32/108 (29%), Positives = 49/108 (45%), Gaps = 27/108 (25%)
Query: 2   FAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG 61
           F  +H L +I+ DLKPEN+L+    YI+V D+           + KR+           G
Sbjct: 154 FEYLHSLDLIYRDLKPENLLIDQQGYIQVTDF----------GFAKRVK----------G 193
Query: 62  STTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG 109
            T         +  T  Y APE+IL  G+    D W++G ++ E+  G
Sbjct: 194 RTWX-------LXGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234

>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a, L173m, Q181k) With Compound 18 Length = 351

Iteration: 1
 Score = 52.4 bits (124), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 32/108 (29%), Positives = 49/108 (45%), Gaps = 27/108 (25%)
Query: 2   FAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG 61
           F  +H L +I+ DLKPEN+++    YIKV D+           + KR+           G
Sbjct: 155 FEYLHSLDLIYRDLKPENLMIDQQGYIKVTDF----------GFAKRVK----------G 194
Query: 62  STTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG 109
            T         +  T  Y APE+IL  G+    D W++G ++ E+  G
Sbjct: 195 RTWX-------LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235

>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein Kinase A (Pka) Length = 350

Iteration: 1
 Score = 52.4 bits (124), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 32/108 (29%), Positives = 49/108 (45%), Gaps = 27/108 (25%)
Query: 2   FAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG 61
           F  +H L +I+ DLKPEN+++    YIKV D+           + KR+           G
Sbjct: 154 FEYLHSLDLIYRDLKPENLMIDQQGYIKVTDF----------GFAKRVK----------G 193
Query: 62  STTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG 109
            T         +  T  Y APE+IL  G+    D W++G ++ E+  G
Sbjct: 194 RTWX-------LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234

>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy) Ethylamino)ethyl) Amide Length = 351

Iteration: 1
 Score = 52.4 bits (124), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 32/108 (29%), Positives = 49/108 (45%), Gaps = 27/108 (25%)
Query: 2   FAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG 61
           F  +H L +I+ DLKPEN+++    YIKV D+           + KR+           G
Sbjct: 155 FEYLHSLDLIYRDLKPENLMIDQQGYIKVTDF----------GFAKRVK----------G 194
Query: 62  STTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG 109
            T         +  T  Y APE+IL  G+    D W++G ++ E+  G
Sbjct: 195 RTWX-------LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235

>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4- Chlorophenyl)-1-(7h-Pyrrolo(2, 3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine Length = 351

Iteration: 1
 Score = 52.0 bits (123), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 32/108 (29%), Positives = 49/108 (45%), Gaps = 27/108 (25%)
Query: 2   FAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG 61
           F  +H L +I+ DLKPEN+++    YIKV D+           + KR+           G
Sbjct: 155 FEYLHSLDLIYRDLKPENLMIDQQGYIKVTDF----------GFAKRVK----------G 194
Query: 62  STTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG 109
            T         +  T  Y APE+IL  G+    D W++G ++ E+  G
Sbjct: 195 RTWX-------LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235

>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h- Purin-6-yl)-benzyl)-amine Length = 351

Iteration: 1
 Score = 52.0 bits (123), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 32/108 (29%), Positives = 49/108 (45%), Gaps = 27/108 (25%)
Query: 2   FAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG 61
           F  +H L +I+ DLKPEN+++    YIKV D+           + KR+           G
Sbjct: 155 FEYLHSLDLIYRDLKPENLMIDQQGYIKVTDF----------GFAKRVK----------G 194
Query: 62  STTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG 109
            T         +  T  Y APE+IL  G+    D W++G ++ E+  G
Sbjct: 195 RTWX-------LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235

>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb Length = 350

Iteration: 1
 Score = 52.0 bits (123), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 32/108 (29%), Positives = 49/108 (45%), Gaps = 27/108 (25%)
Query: 2   FAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG 61
           F  +H L +I+ DLKPEN+++    YIKV D+           + KR+           G
Sbjct: 154 FEYLHSLDLIYRDLKPENLMIDQQGYIKVTDF----------GFAKRVK----------G 193
Query: 62  STTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG 109
            T         +  T  Y APE+IL  G+    D W++G ++ E+  G
Sbjct: 194 RTWX-------LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234

>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To Hydroxyfasudil Length = 351

Iteration: 1
 Score = 51.6 bits (122), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 32/108 (29%), Positives = 49/108 (45%), Gaps = 27/108 (25%)
Query: 2   FAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG 61
           F  +H L +I+ DLKPEN+L+    YI+V D+           + KR+           G
Sbjct: 155 FEYLHSLDLIYRDLKPENLLIDQQGYIQVTDF----------GFAKRVK----------G 194
Query: 62  STTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG 109
            T         +  T  Y APE+IL  G+    D W++G ++ E+  G
Sbjct: 195 RTWX-------LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235

>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic Subunit Of Camp-Dependent Protein Kinase Complexed With A Peptide Inhibitor And Detergent Length = 350

Iteration: 1
 Score = 51.6 bits (122), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 32/108 (29%), Positives = 49/108 (45%), Gaps = 27/108 (25%)
Query: 2   FAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG 61
           F  +H L +I+ DLKPEN+L+    YI+V D+           + KR+           G
Sbjct: 154 FEYLHSLDLIYRDLKPENLLIDQQGYIQVTDF----------GFAKRVK----------G 193
Query: 62  STTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG 109
            T         +  T  Y APE+IL  G+    D W++G ++ E+  G
Sbjct: 194 RTWX-------LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234

>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant Catalytic Subunit Of Camp-Dependent Protein Kinase Complexed With The Peptide Inhibitor Pki(5-24) And Adenosine Length = 350

Iteration: 1
 Score = 51.6 bits (122), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 32/108 (29%), Positives = 49/108 (45%), Gaps = 27/108 (25%)
Query: 2   FAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG 61
           F  +H L +I+ DLKPEN+L+    YI+V D+           + KR+           G
Sbjct: 154 FEYLHSLDLIYRDLKPENLLIDQQGYIQVTDF----------GFAKRVK----------G 193
Query: 62  STTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG 109
            T         +  T  Y APE+IL  G+    D W++G ++ E+  G
Sbjct: 194 RTWX-------LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234

>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The Catalytic Subunit Of Camp-Dependent Protein Kinase Length = 350

Iteration: 1
 Score = 51.6 bits (122), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 32/108 (29%), Positives = 49/108 (45%), Gaps = 27/108 (25%)
Query: 2   FAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG 61
           F  +H L +I+ DLKPEN+L+    YI+V D+           + KR+           G
Sbjct: 154 FEYLHSLDLIYRDLKPENLLIDQQGYIQVTDF----------GFAKRVK----------G 193
Query: 62  STTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG 109
            T         +  T  Y APE+IL  G+    D W++G ++ E+  G
Sbjct: 194 RTWX-------LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234

>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of Camp-Dependent Protein Kinase Length = 345

Iteration: 1
 Score = 51.6 bits (122), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 32/108 (29%), Positives = 49/108 (45%), Gaps = 27/108 (25%)
Query: 2   FAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG 61
           F  +H L +I+ DLKPEN+L+    YI+V D+           + KR+           G
Sbjct: 149 FEYLHSLDLIYRDLKPENLLIDQQGYIQVTDF----------GFAKRVK----------G 188
Query: 62  STTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG 109
            T         +  T  Y APE+IL  G+    D W++G ++ E+  G
Sbjct: 189 RTWX-------LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 229

>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory Subunit Of Protein Kinase A That Represents The Inhibited State Length = 350

Iteration: 1
 Score = 51.6 bits (122), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 32/108 (29%), Positives = 49/108 (45%), Gaps = 27/108 (25%)
Query: 2   FAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG 61
           F  +H L +I+ DLKPEN+L+    YI+V D+           + KR+           G
Sbjct: 154 FEYLHSLDLIYRDLKPENLLIDQQGYIQVTDF----------GFAKRVK----------G 193
Query: 62  STTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG 109
            T         +  T  Y APE+IL  G+    D W++G ++ E+  G
Sbjct: 194 RTWX-------LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234

>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of Camp-Dependent Protein Kinase And Adenosine Further Defines Conformational Flexibility Length = 350

Iteration: 1
 Score = 51.6 bits (122), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 32/108 (29%), Positives = 49/108 (45%), Gaps = 27/108 (25%)
Query: 2   FAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG 61
           F  +H L +I+ DLKPEN+L+    YI+V D+           + KR+           G
Sbjct: 154 FEYLHSLDLIYRDLKPENLLIDQQGYIQVTDF----------GFAKRVK----------G 193
Query: 62  STTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG 109
            T         +  T  Y APE+IL  G+    D W++G ++ E+  G
Sbjct: 194 RTWX-------LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234

>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit Of Camp- Dependent Protein Kinase Length = 350

Iteration: 1
 Score = 51.6 bits (122), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 32/108 (29%), Positives = 49/108 (45%), Gaps = 27/108 (25%)
Query: 2   FAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG 61
           F  +H L +I+ DLKPEN+L+    YI+V D+           + KR+           G
Sbjct: 154 FEYLHSLDLIYRDLKPENLLIDQQGYIQVTDF----------GFAKRVK----------G 193
Query: 62  STTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG 109
            T         +  T  Y APE+IL  G+    D W++G ++ E+  G
Sbjct: 194 RTWX-------LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234

>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase Inhibitor Arc-670 Length = 351

Iteration: 1
 Score = 51.6 bits (122), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 32/108 (29%), Positives = 49/108 (45%), Gaps = 27/108 (25%)
Query: 2   FAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG 61
           F  +H L +I+ DLKPEN+L+    YI+V D+           + KR+           G
Sbjct: 155 FEYLHSLDLIYRDLKPENLLIDQQGYIQVTDF----------GFAKRVK----------G 194
Query: 62  STTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG 109
            T         +  T  Y APE+IL  G+    D W++G ++ E+  G
Sbjct: 195 RTWX-------LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235

>pdb|2F7E|E Chain E, Pka Complexed With (S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6- Yl-Pyridin-3-Yloxymethyl-Etylamine Length = 351

Iteration: 1
 Score = 51.6 bits (122), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 30/108 (27%), Positives = 48/108 (44%), Gaps = 27/108 (25%)
Query: 2   FAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG 61
           F  +H L +I+ DLKPEN+L+    YI+V D+           + KR+   +        
Sbjct: 155 FEYLHSLDLIYRDLKPENLLIDQQGYIQVTDF----------GFAKRVKGRTWT------ 198
Query: 62  STTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG 109
                      +  T  Y APE+IL  G+    D W++G ++ E+  G
Sbjct: 199 -----------LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235

>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp- Dependent Protein Kinase Complexed With A Substrate Peptide, Adp And Detergent Length = 350

Iteration: 1
 Score = 51.6 bits (122), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 32/108 (29%), Positives = 49/108 (45%), Gaps = 27/108 (25%)
Query: 2   FAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG 61
           F  +H L +I+ DLKPEN+L+    YI+V D+           + KR+           G
Sbjct: 154 FEYLHSLDLIYRDLKPENLLIDQQGYIQVTDF----------GFAKRVK----------G 193
Query: 62  STTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG 109
            T         +  T  Y APE+IL  G+    D W++G ++ E+  G
Sbjct: 194 RTWX-------LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234

>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective Inhibitors In Complex With Protein Kinase A And Mutants Length = 350

Iteration: 1
 Score = 51.6 bits (122), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 32/108 (29%), Positives = 49/108 (45%), Gaps = 27/108 (25%)
Query: 2   FAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG 61
           F  +H L +I+ DLKPEN+L+    YI+V D+           + KR+           G
Sbjct: 154 FEYLHSLDLIYRDLKPENLLIDQQGYIQVTDF----------GFAKRVK----------G 193
Query: 62  STTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG 109
            T         +  T  Y APE+IL  G+    D W++G ++ E+  G
Sbjct: 194 RTWX-------LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234

>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of Camp-Dependent Protein Kinase And An Inhibitor Peptide Displays An Open Conformation Length = 350

Iteration: 1
 Score = 51.6 bits (122), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 32/108 (29%), Positives = 49/108 (45%), Gaps = 27/108 (25%)
Query: 2   FAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG 61
           F  +H L +I+ DLKPEN+L+    YI+V D+           + KR+           G
Sbjct: 154 FEYLHSLDLIYRDLKPENLLIDQQGYIQVTDF----------GFAKRVK----------G 193
Query: 62  STTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG 109
            T         +  T  Y APE+IL  G+    D W++G ++ E+  G
Sbjct: 194 RTWX-------LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234

>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol Length = 351

Iteration: 1
 Score = 51.6 bits (122), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 32/108 (29%), Positives = 49/108 (45%), Gaps = 27/108 (25%)
Query: 2   FAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG 61
           F  +H L +I+ DLKPEN+L+    YI+V D+           + KR+           G
Sbjct: 155 FEYLHSLDLIYRDLKPENLLIDQQGYIQVTDF----------GFAKRVK----------G 194
Query: 62  STTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG 109
            T         +  T  Y APE+IL  G+    D W++G ++ E+  G
Sbjct: 195 RTWX-------LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235

>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit (E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24) Isoelectric Variant Ca) And Mn2+ Adenylyl Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c Length = 350

Iteration: 1
 Score = 51.6 bits (122), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 32/108 (29%), Positives = 49/108 (45%), Gaps = 27/108 (25%)
Query: 2   FAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG 61
           F  +H L +I+ DLKPEN+L+    YI+V D+           + KR+           G
Sbjct: 154 FEYLHSLDLIYRDLKPENLLIDQQGYIQVTDF----------GFAKRVK----------G 193
Query: 62  STTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG 109
            T         +  T  Y APE+IL  G+    D W++G ++ E+  G
Sbjct: 194 RTWX-------LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234

>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In Complex With H89 Protein Kinase Inhibitor N-[2- (4-Bromocinnamylamino)ethyl]-5-Isoquinoline Length = 350

Iteration: 1
 Score = 51.6 bits (122), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 32/108 (29%), Positives = 49/108 (45%), Gaps = 27/108 (25%)
Query: 2   FAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG 61
           F  +H L +I+ DLKPEN+L+    YI+V D+           + KR+           G
Sbjct: 154 FEYLHSLDLIYRDLKPENLLIDQQGYIQVTDF----------GFAKRVK----------G 193
Query: 62  STTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG 109
            T         +  T  Y APE+IL  G+    D W++G ++ E+  G
Sbjct: 194 RTWX-------LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234

>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase Inhibitor Arc-1039 Length = 351

Iteration: 1
 Score = 51.6 bits (122), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 32/108 (29%), Positives = 49/108 (45%), Gaps = 27/108 (25%)
Query: 2   FAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG 61
           F  +H L +I+ DLKPEN+L+    YI+V D+           + KR+           G
Sbjct: 155 FEYLHSLDLIYRDLKPENLLIDQQGYIQVTDF----------GFAKRVK----------G 194
Query: 62  STTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG 109
            T         +  T  Y APE+IL  G+    D W++G ++ E+  G
Sbjct: 195 RTWX-------LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235

>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent Protein Kinase Length = 350

Iteration: 1
 Score = 51.6 bits (122), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 32/108 (29%), Positives = 49/108 (45%), Gaps = 27/108 (25%)
Query: 2   FAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG 61
           F  +H L +I+ DLKPEN+L+    YI+V D+           + KR+           G
Sbjct: 154 FEYLHSLDLIYRDLKPENLLIDQQGYIQVTDF----------GFAKRVK----------G 193
Query: 62  STTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG 109
            T         +  T  Y APE+IL  G+    D W++G ++ E+  G
Sbjct: 194 RTWX-------LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234

>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy) Ethylamino)ethyl)amide Length = 351

Iteration: 1
 Score = 51.6 bits (122), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 32/108 (29%), Positives = 49/108 (45%), Gaps = 27/108 (25%)
Query: 2   FAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG 61
           F  +H L +I+ DLKPEN+L+    YI+V D+           + KR+           G
Sbjct: 155 FEYLHSLDLIYRDLKPENLLIDQQGYIQVTDF----------GFAKRVK----------G 194
Query: 62  STTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG 109
            T         +  T  Y APE+IL  G+    D W++G ++ E+  G
Sbjct: 195 RTWX-------LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235

>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective Inhibitors In Complex With Protein Kinase A And Mutants Length = 350

Iteration: 1
 Score = 51.6 bits (122), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 30/108 (27%), Positives = 45/108 (41%), Gaps = 27/108 (25%)
Query: 2   FAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG 61
           F  +H L +I+ DLKPEN+++    YIKV                            DFG
Sbjct: 154 FEYLHSLDLIYRDLKPENLMIDQQGYIKV---------------------------TDFG 186
Query: 62  STTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG 109
                +     +  T  Y APE+IL  G+    D W++G ++ E+  G
Sbjct: 187 LAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234

>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077) Length = 350

Iteration: 1
 Score = 51.6 bits (122), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 32/108 (29%), Positives = 49/108 (45%), Gaps = 27/108 (25%)
Query: 2   FAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG 61
           F  +H L +I+ DLKPEN+L+    YI+V D+           + KR+           G
Sbjct: 154 FEYLHSLDLIYRDLKPENLLIDQQGYIQVTDF----------GFAKRVK----------G 193
Query: 62  STTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG 109
            T         +  T  Y APE+IL  G+    D W++G ++ E+  G
Sbjct: 194 RTWX-------LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234

>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit Of Camp- Dependent Protein Kinase Reveal Open And Closed Conformations Length = 350

Iteration: 1
 Score = 51.6 bits (122), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 32/108 (29%), Positives = 49/108 (45%), Gaps = 27/108 (25%)
Query: 2   FAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG 61
           F  +H L +I+ DLKPEN+L+    YI+V D+           + KR+           G
Sbjct: 154 FEYLHSLDLIYRDLKPENLLIDQQGYIQVTDF----------GFAKRVK----------G 193
Query: 62  STTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG 109
            T         +  T  Y APE+IL  G+    D W++G ++ E+  G
Sbjct: 194 RTWX-------LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234

>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In Complex With Staurosporine Length = 350

Iteration: 1
 Score = 51.6 bits (122), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 32/108 (29%), Positives = 49/108 (45%), Gaps = 27/108 (25%)
Query: 2   FAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG 61
           F  +H L +I+ DLKPEN+L+    YI+V D+           + KR+           G
Sbjct: 154 FEYLHSLDLIYRDLKPENLLIDQQGYIQVTDF----------GFAKRVK----------G 193
Query: 62  STTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG 109
            T         +  T  Y APE+IL  G+    D W++G ++ E+  G
Sbjct: 194 RTWX-------LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234

>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With A- 443654 Length = 351

Iteration: 1
 Score = 51.6 bits (122), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 32/108 (29%), Positives = 49/108 (45%), Gaps = 27/108 (25%)
Query: 2   FAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG 61
           F  +H L +I+ DLKPEN+L+    YI+V D+           + KR+           G
Sbjct: 155 FEYLHSLDLIYRDLKPENLLIDQQGYIQVTDF----------GFAKRVK----------G 194
Query: 62  STTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG 109
            T         +  T  Y APE+IL  G+    D W++G ++ E+  G
Sbjct: 195 RTWX-------LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235

>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With Pki-5-24 Length = 350

Iteration: 1
 Score = 51.6 bits (122), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 32/108 (29%), Positives = 49/108 (45%), Gaps = 27/108 (25%)
Query: 2   FAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG 61
           F  +H L +I+ DLKPEN+L+    YI+V D+           + KR+           G
Sbjct: 154 FEYLHSLDLIYRDLKPENLLIDQQGYIQVTDF----------GFAKRVK----------G 193
Query: 62  STTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG 109
            T         +  T  Y APE+IL  G+    D W++G ++ E+  G
Sbjct: 194 RTWX-------LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234

>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With Azepane Derivative 8 Length = 350

Iteration: 1
 Score = 51.6 bits (122), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 32/108 (29%), Positives = 49/108 (45%), Gaps = 27/108 (25%)
Query: 2   FAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG 61
           F  +H L +I+ DLKPEN+L+    YI+V D+           + KR+           G
Sbjct: 154 FEYLHSLDLIYRDLKPENLLIDQQGYIQVTDF----------GFAKRVK----------G 193
Query: 62  STTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG 109
            T         +  T  Y APE+IL  G+    D W++G ++ E+  G
Sbjct: 194 RTWX-------LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234

>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor Complex Length = 371

Iteration: 1
 Score = 51.6 bits (122), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 32/108 (29%), Positives = 49/108 (45%), Gaps = 27/108 (25%)
Query: 2   FAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG 61
           F  +H L +I+ DLKPEN+L+    YI+V D+           + KR+           G
Sbjct: 175 FEYLHSLDLIYRDLKPENLLIDQQGYIQVTDF----------GFAKRVK----------G 214
Query: 62  STTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG 109
            T         +  T  Y APE+IL  G+    D W++G ++ E+  G
Sbjct: 215 RTWX-------LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 255

>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent Protein Kinase With Unphosphorylated Turn Motif Length = 371

Iteration: 1
 Score = 51.6 bits (122), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 32/108 (29%), Positives = 49/108 (45%), Gaps = 27/108 (25%)
Query: 2   FAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG 61
           F  +H L +I+ DLKPEN+L+    YI+V D+           + KR+           G
Sbjct: 175 FEYLHSLDLIYRDLKPENLLIDQQGYIQVTDF----------GFAKRVK----------G 214
Query: 62  STTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG 109
            T         +  T  Y APE+IL  G+    D W++G ++ E+  G
Sbjct: 215 RTWX-------LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 255

>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit Of Camp- Dependent Protein Kinase In Complex With Sp20 And Amp-Pnp Length = 350

Iteration: 1
 Score = 51.6 bits (122), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 32/108 (29%), Positives = 49/108 (45%), Gaps = 27/108 (25%)
Query: 2   FAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG 61
           F  +H L +I+ DLKPEN+L+    YI+V D+           + KR+           G
Sbjct: 154 FEYLHSLDLIYRDLKPENLLIDQQGYIQVTDF----------GFAKRVK----------G 193
Query: 62  STTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG 109
            T         +  T  Y APE+IL  G+    D W++G ++ E+  G
Sbjct: 194 RTWX-------LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234

>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform Of Protein Kinase A (pka) Catalytic Subunit Calpha 2 Length = 343

Iteration: 1
 Score = 51.6 bits (122), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 32/108 (29%), Positives = 49/108 (45%), Gaps = 27/108 (25%)
Query: 2   FAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG 61
           F  +H L +I+ DLKPEN+L+    YI+V D+           + KR+           G
Sbjct: 147 FEYLHSLDLIYRDLKPENLLIDQQGYIQVTDF----------GFAKRVK----------G 186
Query: 62  STTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG 109
            T         +  T  Y APE+IL  G+    D W++G ++ E+  G
Sbjct: 187 RTWX-------LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 227

>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2 Length = 343

Iteration: 1
 Score = 51.2 bits (121), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 32/108 (29%), Positives = 49/108 (45%), Gaps = 27/108 (25%)
Query: 2   FAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG 61
           F  +H L +I+ DLKPEN+L+    YI+V D+           + KR+           G
Sbjct: 147 FEYLHSLDLIYRDLKPENLLIDQQGYIQVTDF----------GFAKRVK----------G 186
Query: 62  STTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG 109
            T         +  T  Y APE+IL  G+    D W++G ++ E+  G
Sbjct: 187 RTWX-------LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 227

>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And Potent Inhibitors For Akt: Synthesis And Sar Studies Length = 337

Iteration: 1
 Score = 51.2 bits (121), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 32/108 (29%), Positives = 49/108 (45%), Gaps = 27/108 (25%)
Query: 2   FAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG 61
           F  +H L +I+ DLKPEN+L+    YI+V D+           + KR+           G
Sbjct: 141 FEYLHSLDLIYRDLKPENLLIDEQGYIQVTDF----------GFAKRVK----------G 180
Query: 62  STTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG 109
            T         +  T  Y APE+IL  G+    D W++G ++ E+  G
Sbjct: 181 RTWX-------LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 221

>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147 Length = 429

Iteration: 1
 Score = 51.2 bits (121), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 63/251 (25%), Positives = 105/251 (41%), Gaps = 37/251 (14%)
Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDY--KSSLHTPKDSSYFKRMPKSSAIKVIDFGS 62
           +H+  +IH DLKP N LL     +K+ D+    ++++ KD      + +    +     +
Sbjct: 147 IHESGIIHRDLKPANCLLNQDCSVKICDFGLARTINSDKDIHIVNDLEEKEENEEPGPHN 206
Query: 63  TTYERPDQNYIVSTRHYRAPEVIL-GLGWTYPCDIWSVGCILVELCTGEALFQTHEN--L 119
              ++   +++V TR YRAPE+IL    +T   DIWS GCI  EL     + ++H N   
Sbjct: 207 KNLKKQLTSHVV-TRWYRAPELILLQENYTNSIDIWSTGCIFAELLN---MMKSHINNPT 262
Query: 120 EHLAMME-RVLGPL-PQHMLKRVDRHAEKYVRRGRLDW---PEGAASRESIKSVMKLPRL 174
               +       PL P H  K+V   +     R +L+      G    E +K + K    
Sbjct: 263 NRFPLFPGSSCFPLSPDHNSKKVHEKS----NRDQLNIIFNVIGTPPEEDLKCITK---- 314
Query: 175 QVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRL 234
                     E   Y   F   D I       + +     + +   LL+ +LR++   R+
Sbjct: 315 ---------QEVIKYIKLFPTRDGID------LSKKYSSISKEGIDLLESMLRFNAQKRI 359
Query: 235 TAREALRHPFF 245
           T  +AL HP+ 
Sbjct: 360 TIDKALSHPYL 370

>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma Gondii, Tgme49_018720 Length = 285

Iteration: 1
 Score = 51.2 bits (121), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 36/110 (32%), Positives = 48/110 (43%), Gaps = 27/110 (24%)
Query: 2   FAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG 61
            A  H   ++H DLKPEN+L             +S H+P              IK+IDFG
Sbjct: 137 LAYFHSQHVVHKDLKPENILF----------QDTSPHSP--------------IKIIDFG 172
Query: 62  STTYERPDQNYI--VSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG 109
                + D++      T  Y APEV      T+ CDIWS G ++  L TG
Sbjct: 173 LAELFKSDEHSTNAAGTALYMAPEV-FKRDVTFKCDIWSAGVVMYFLLTG 221

>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors Length = 336

Iteration: 1
 Score = 51.2 bits (121), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 30/108 (27%), Positives = 48/108 (44%), Gaps = 27/108 (25%)
Query: 2   FAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG 61
           F  +H L +I+ DLKPEN+L+    YI+V D+           + KR+   +        
Sbjct: 140 FEYLHSLDLIYRDLKPENLLIDQQGYIQVTDF----------GFAKRVKGRTWT------ 183
Query: 62  STTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG 109
                      +  T  Y APE+IL  G+    D W++G ++ E+  G
Sbjct: 184 -----------LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 220

>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human Pdk1 Complex 2 Length = 311

Iteration: 1
 Score = 50.8 bits (120), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 29/105 (27%), Positives = 50/105 (47%), Gaps = 22/105 (20%)
Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           +H   +IH DLKPEN+LL    +I++ D+ ++                   KV+   S  
Sbjct: 148 LHGKGIIHRDLKPENILLNEDMHIQITDFGTA-------------------KVL---SPE 185
Query: 65  YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG 109
            ++   N  V T  Y +PE++     +   D+W++GCI+ +L  G
Sbjct: 186 SKQARANSFVGTAQYVSPELLTEKSASKSSDLWALGCIIYQLVAG 230

>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp Length = 350

Iteration: 1
 Score = 50.8 bits (120), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 31/108 (28%), Positives = 49/108 (45%), Gaps = 27/108 (25%)
Query: 2   FAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG 61
           F  +H L +I+ DLKPEN+++    YI+V D+           + KR+           G
Sbjct: 154 FEYLHSLDLIYRDLKPENLMIDQQGYIQVTDF----------GFAKRVK----------G 193
Query: 62  STTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG 109
            T         +  T  Y APE+IL  G+    D W++G ++ E+  G
Sbjct: 194 RTWX-------LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234

>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric Activator Ps171 Bound To The Pif-Pocket Length = 311

Iteration: 1
 Score = 50.8 bits (120), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 29/105 (27%), Positives = 49/105 (46%), Gaps = 22/105 (20%)
Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           +H   +IH DLKPEN+LL    +I++ D+ ++                   KV+   S  
Sbjct: 148 LHGKGIIHRDLKPENILLNEDMHIQITDFGTA-------------------KVL---SPE 185
Query: 65  YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG 109
            ++   N  V T  Y +PE++         D+W++GCI+ +L  G
Sbjct: 186 SKQARANXFVGTAQYVSPELLTEKSAXKSSDLWALGCIIYQLVAG 230

>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent Protein Kinase Reveals Unexpected Apoenzyme Conformation Length = 350

Iteration: 1
 Score = 50.4 bits (119), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 31/108 (28%), Positives = 49/108 (45%), Gaps = 27/108 (25%)
Query: 2   FAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG 61
           F  +H L +I+ DLKPEN+L+    YI+V D+           + KR+           G
Sbjct: 154 FEYLHSLDLIYRDLKPENLLIDQQGYIQVTDF----------GFAKRVK----------G 193
Query: 62  STTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG 109
            T         +  T  Y APE+IL  G+    D W++G ++ ++  G
Sbjct: 194 RTWX-------LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYQMAAG 234

>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain In Complex With Atp Length = 311

Iteration: 1
 Score = 50.4 bits (119), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 29/105 (27%), Positives = 49/105 (46%), Gaps = 22/105 (20%)
Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           +H   +IH DLKPEN+LL    +I++ D+ ++                   KV+   S  
Sbjct: 148 LHGKGIIHRDLKPENILLNEDMHIQITDFGTA-------------------KVL---SPE 185
Query: 65  YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG 109
            ++   N  V T  Y +PE++         D+W++GCI+ +L  G
Sbjct: 186 SKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 230

>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered N- Terminal Helix Length = 350

Iteration: 1
 Score = 50.1 bits (118), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 29/108 (26%), Positives = 45/108 (41%), Gaps = 27/108 (25%)
Query: 2   FAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG 61
           F  +H L +I+ DLKPEN+++    YI+V                            DFG
Sbjct: 154 FEYLHSLDLIYRDLKPENLMIDQQGYIQV---------------------------TDFG 186
Query: 62  STTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG 109
                +     +  T  Y APE+IL  G+    D W++G ++ E+  G
Sbjct: 187 LAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234

>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3- Phosphoinositide Dependent Kinase (Pdk1) Length = 311

Iteration: 1
 Score = 50.1 bits (118), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 29/105 (27%), Positives = 49/105 (46%), Gaps = 22/105 (20%)
Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           +H   +IH DLKPEN+LL    +I++ D+ ++                   KV+   S  
Sbjct: 148 LHGKGIIHRDLKPENILLNEDMHIQITDFGTA-------------------KVL---SPE 185
Query: 65  YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG 109
            ++   N  V T  Y +PE++         D+W++GCI+ +L  G
Sbjct: 186 SKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 230

>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through Fragment-Based Lead Discovery Length = 311

Iteration: 1
 Score = 50.1 bits (118), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 29/105 (27%), Positives = 49/105 (46%), Gaps = 22/105 (20%)
Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           +H   +IH DLKPEN+LL    +I++ D+ ++                   KV+   S  
Sbjct: 148 LHGKGIIHRDLKPENILLNEDMHIQITDFGTA-------------------KVL---SPE 185
Query: 65  YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG 109
            ++   N  V T  Y +PE++         D+W++GCI+ +L  G
Sbjct: 186 SKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 230

>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx Length = 314

Iteration: 1
 Score = 50.1 bits (118), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 29/105 (27%), Positives = 49/105 (46%), Gaps = 22/105 (20%)
Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           +H   +IH DLKPEN+LL    +I++ D+ ++                   KV+   S  
Sbjct: 151 LHGKGIIHRDLKPENILLNEDMHIQITDFGTA-------------------KVL---SPE 188
Query: 65  YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG 109
            ++   N  V T  Y +PE++         D+W++GCI+ +L  G
Sbjct: 189 SKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 233

>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With Ly333531 Length = 310

Iteration: 1
 Score = 50.1 bits (118), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 29/105 (27%), Positives = 49/105 (46%), Gaps = 22/105 (20%)
Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           +H   +IH DLKPEN+LL    +I++ D+ ++                   KV+   S  
Sbjct: 146 LHGKGIIHRDLKPENILLNEDMHIQITDFGTA-------------------KVL---SPE 183
Query: 65  YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG 109
            ++   N  V T  Y +PE++         D+W++GCI+ +L  G
Sbjct: 184 SKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 228

>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A Pyrazoloquinazoline Inhibitor Length = 309

Iteration: 1
 Score = 50.1 bits (118), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 29/105 (27%), Positives = 49/105 (46%), Gaps = 22/105 (20%)
Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           +H   +IH DLKPEN+LL    +I++ D+ ++                   KV+   S  
Sbjct: 146 LHGKGIIHRDLKPENILLNEDMHIQITDFGTA-------------------KVL---SPE 183
Query: 65  YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG 109
            ++   N  V T  Y +PE++         D+W++GCI+ +L  G
Sbjct: 184 SKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 228

>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A Pyrazoloquinazoline Inhibitor Length = 309

Iteration: 1
 Score = 50.1 bits (118), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 29/105 (27%), Positives = 49/105 (46%), Gaps = 22/105 (20%)
Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           +H   +IH DLKPEN+LL    +I++ D+ ++                   KV+   S  
Sbjct: 146 LHGKGIIHRDLKPENILLNEDMHIQITDFGTA-------------------KVL---SPE 183
Query: 65  YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG 109
            ++   N  V T  Y +PE++         D+W++GCI+ +L  G
Sbjct: 184 SKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 228

>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase Cgd7_1840 Length = 294

Iteration: 1
 Score = 50.1 bits (118), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 42/150 (28%), Positives = 61/150 (40%), Gaps = 27/150 (18%)
Query: 3   AVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGS 62
           A  H L + H DLKPEN L ++      PD                    S +K+IDFG 
Sbjct: 137 AYCHKLNVAHRDLKPENFLFLTDS----PD--------------------SPLKLIDFGL 172
Query: 63  TTYERPDQ--NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLE 120
               +P +     V T +Y +P+V+ GL +   CD WS G ++  L  G   F    + E
Sbjct: 173 AARFKPGKMMRTKVGTPYYVSPQVLEGL-YGPECDEWSAGVMMYVLLCGYPPFSAPTDXE 231
Query: 121 HLAMMERVLGPLPQHMLKRVDRHAEKYVRR 150
            +  +       P+     V   AE  +RR
Sbjct: 232 VMLKIREGTFTFPEKDWLNVSPQAESLIRR 261

>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i Length = 312

Iteration: 1
 Score = 50.1 bits (118), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 29/105 (27%), Positives = 49/105 (46%), Gaps = 22/105 (20%)
Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           +H   +IH DLKPEN+LL    +I++ D+ ++                   KV+   S  
Sbjct: 149 LHGKGIIHRDLKPENILLNEDMHIQITDFGTA-------------------KVL---SPE 186
Query: 65  YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG 109
            ++   N  V T  Y +PE++         D+W++GCI+ +L  G
Sbjct: 187 SKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 231

>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka C-Subunit:amp-Pnp:mg2+ Complex Length = 350

Iteration: 1
 Score = 50.1 bits (118), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 30/108 (27%), Positives = 49/108 (45%), Gaps = 27/108 (25%)
Query: 2   FAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG 61
           F  +H L +I+ DLKPEN+++    YI+V D+           + KR+           G
Sbjct: 154 FEYLHSLDLIYRDLKPENLIIDQQGYIQVTDF----------GFAKRVK----------G 193
Query: 62  STTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG 109
            T         +  T  Y APE+I+  G+    D W++G ++ E+  G
Sbjct: 194 RTWX-------LCGTPEYLAPEIIISKGYNKAVDWWALGVLIYEMAAG 234

>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In Complex With Compound 9 Length = 311

Iteration: 1
 Score = 50.1 bits (118), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 29/105 (27%), Positives = 49/105 (46%), Gaps = 22/105 (20%)
Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           +H   +IH DLKPEN+LL    +I++ D+ ++                   KV+   S  
Sbjct: 148 LHGKGIIHRDLKPENILLNEDMHIQITDFGTA-------------------KVL---SPE 185
Query: 65  YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG 109
            ++   N  V T  Y +PE++         D+W++GCI+ +L  G
Sbjct: 186 SKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 230

>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment Inhibitor 1f8 Length = 316

Iteration: 1
 Score = 50.1 bits (118), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 29/105 (27%), Positives = 49/105 (46%), Gaps = 22/105 (20%)
Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           +H   +IH DLKPEN+LL    +I++ D+ ++                   KV+   S  
Sbjct: 153 LHGKGIIHRDLKPENILLNEDMHIQITDFGTA-------------------KVL---SPE 190
Query: 65  YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG 109
            ++   N  V T  Y +PE++         D+W++GCI+ +L  G
Sbjct: 191 SKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 235

>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6 Length = 311

Iteration: 1
 Score = 50.1 bits (118), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 29/105 (27%), Positives = 49/105 (46%), Gaps = 22/105 (20%)
Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           +H   +IH DLKPEN+LL    +I++ D+ ++                   KV+   S  
Sbjct: 145 LHGKGIIHRDLKPENILLNEDMHIQITDFGTA-------------------KVL---SPE 182
Query: 65  YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG 109
            ++   N  V T  Y +PE++         D+W++GCI+ +L  G
Sbjct: 183 SKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 227

>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium Dependent Protein Kinase Cgd7_1840 In Presence Of Indirubin E804 Length = 277

Iteration: 1
 Score = 50.1 bits (118), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 42/150 (28%), Positives = 61/150 (40%), Gaps = 27/150 (18%)
Query: 3   AVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGS 62
           A  H L + H DLKPEN L ++      PD                    S +K+IDFG 
Sbjct: 120 AYCHKLNVAHRDLKPENFLFLTDS----PD--------------------SPLKLIDFGL 155
Query: 63  TTYERPDQ--NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLE 120
               +P +     V T +Y +P+V+ GL +   CD WS G ++  L  G   F    + E
Sbjct: 156 AARFKPGKMMRTKVGTPYYVSPQVLEGL-YGPECDEWSAGVMMYVLLCGYPPFSAPTDXE 214
Query: 121 HLAMMERVLGPLPQHMLKRVDRHAEKYVRR 150
            +  +       P+     V   AE  +RR
Sbjct: 215 VMLKIREGTFTFPEKDWLNVSPQAESLIRR 244

>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain Length = 310

Iteration: 1
 Score = 50.1 bits (118), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 29/105 (27%), Positives = 49/105 (46%), Gaps = 22/105 (20%)
Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           +H   +IH DLKPEN+LL    +I++ D+ ++                   KV+   S  
Sbjct: 146 LHGKGIIHRDLKPENILLNEDMHIQITDFGTA-------------------KVL---SPE 183
Query: 65  YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG 109
            ++   N  V T  Y +PE++         D+W++GCI+ +L  G
Sbjct: 184 SKQARANAFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 228

>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent Kinase- 1 (Pdk-1)catalytic Domain Bound To A Dibenzonaphthyridine Inhibitor Length = 312

Iteration: 1
 Score = 50.1 bits (118), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 29/105 (27%), Positives = 49/105 (46%), Gaps = 22/105 (20%)
Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           +H   +IH DLKPEN+LL    +I++ D+ ++                   KV+   S  
Sbjct: 149 LHGKGIIHRDLKPENILLNEDMHIQITDFGTA-------------------KVL---SPE 186
Query: 65  YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG 109
            ++   N  V T  Y +PE++         D+W++GCI+ +L  G
Sbjct: 187 SKQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 231

>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8 Length = 286

Iteration: 1
 Score = 50.1 bits (118), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 29/105 (27%), Positives = 49/105 (46%), Gaps = 22/105 (20%)
Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           +H   +IH DLKPEN+LL    +I++ D+ ++                   KV+   S  
Sbjct: 124 LHGKGIIHRDLKPENILLNEDMHIQITDFGTA-------------------KVL---SPE 161
Query: 65  YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG 109
            ++   N  V T  Y +PE++         D+W++GCI+ +L  G
Sbjct: 162 SKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 206

>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With Bim-3 Length = 286

Iteration: 1
 Score = 49.7 bits (117), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 29/105 (27%), Positives = 49/105 (46%), Gaps = 22/105 (20%)
Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           +H   +IH DLKPEN+LL    +I++ D+ ++                   KV+   S  
Sbjct: 125 LHGKGIIHRDLKPENILLNEDMHIQITDFGTA-------------------KVL---SPE 162
Query: 65  YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG 109
            ++   N  V T  Y +PE++         D+W++GCI+ +L  G
Sbjct: 163 SKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 207

>pdb|1Z5M|A Chain A, Crystal Structure Of N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl) Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2- Dimethylpropanediamide Complexed With Human Pdk1 Length = 286

Iteration: 1
 Score = 49.7 bits (117), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 29/105 (27%), Positives = 49/105 (46%), Gaps = 22/105 (20%)
Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           +H   +IH DLKPEN+LL    +I++ D+ ++                   KV+   S  
Sbjct: 123 LHGKGIIHRDLKPENILLNEDMHIQITDFGTA-------------------KVL---SPE 160
Query: 65  YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG 109
            ++   N  V T  Y +PE++         D+W++GCI+ +L  G
Sbjct: 161 SKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 205

>pdb|4FIE|A Chain A, Full-Length Human Pak4 Length = 423

Iteration: 1
 Score = 49.7 bits (117), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 32/130 (24%), Positives = 57/130 (43%), Gaps = 24/130 (18%)
Query: 2   FAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG 61
            +V+H   +IH D+K +++LL     +K+ D+       K                    
Sbjct: 260 LSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSK-------------------- 299
Query: 62  STTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEH 121
               E P +  +V T ++ APE+I  L +    DIWS+G +++E+  GE  +     L+ 
Sbjct: 300 ----EVPRRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKA 355
Query: 122 LAMMERVLGP 131
           + M+   L P
Sbjct: 356 MKMIRDNLPP 365

>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead Compound Length = 292

Iteration: 1
 Score = 49.7 bits (117), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 29/105 (27%), Positives = 49/105 (46%), Gaps = 22/105 (20%)
Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           +H   +IH DLKPEN+LL    +I++ D+ ++                   KV+   S  
Sbjct: 130 LHGKGIIHRDLKPENILLNEDMHIQITDFGTA-------------------KVL---SPE 167
Query: 65  YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG 109
            ++   N  V T  Y +PE++         D+W++GCI+ +L  G
Sbjct: 168 SKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 212

>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A Benzolactam-Derived Inhibitor Length = 333

Iteration: 1
 Score = 49.7 bits (117), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 26/85 (30%), Positives = 46/85 (54%), Gaps = 3/85 (3%)
Query: 55  IKVIDFGSTT---YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEA 111
           +K+ DFG  T   Y+   +  +  T +Y APEV+   G ++  D+WS+GCI+  L  G+ 
Sbjct: 178 VKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKP 237
Query: 112 LFQTHENLEHLAMMERVLGPLPQHM 136
            F+T    E    +++    +P+H+
Sbjct: 238 PFETSCLKETYLRIKKNEYSIPKHI 262

>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1 Catalytic Domain Length = 289

Iteration: 1
 Score = 49.7 bits (117), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 29/105 (27%), Positives = 49/105 (46%), Gaps = 22/105 (20%)
Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           +H   +IH DLKPEN+LL    +I++ D+ ++                   KV+   S  
Sbjct: 126 LHGKGIIHRDLKPENILLNEDMHIQITDFGTA-------------------KVL---SPE 163
Query: 65  YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG 109
            ++   N  V T  Y +PE++         D+W++GCI+ +L  G
Sbjct: 164 SKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 208

>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like Kinase 1 Length = 335

Iteration: 1
 Score = 49.7 bits (117), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 26/85 (30%), Positives = 46/85 (54%), Gaps = 3/85 (3%)
Query: 55  IKVIDFGSTT---YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEA 111
           +K+ DFG  T   Y+   +  +  T +Y APEV+   G ++  D+WS+GCI+  L  G+ 
Sbjct: 180 VKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKP 239
Query: 112 LFQTHENLEHLAMMERVLGPLPQHM 136
            F+T    E    +++    +P+H+
Sbjct: 240 PFETSCLKETYLRIKKNEYSIPKHI 264

>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide Length = 346

Iteration: 1
 Score = 49.7 bits (117), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 32/130 (24%), Positives = 57/130 (43%), Gaps = 24/130 (18%)
Query: 2   FAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG 61
            +V+H   +IH D+K +++LL     +K+ D+       K                    
Sbjct: 183 LSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSK-------------------- 222
Query: 62  STTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEH 121
               E P +  +V T ++ APE+I  L +    DIWS+G +++E+  GE  +     L+ 
Sbjct: 223 ----EVPRRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKA 278
Query: 122 LAMMERVLGP 131
           + M+   L P
Sbjct: 279 MKMIRDNLPP 288

>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536 Length = 294

Iteration: 1
 Score = 49.7 bits (117), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 26/85 (30%), Positives = 46/85 (54%), Gaps = 3/85 (3%)
Query: 55  IKVIDFGSTT---YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEA 111
           +K+ DFG  T   Y+   +  +  T +Y APEV+   G ++  D+WS+GCI+  L  G+ 
Sbjct: 154 VKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKP 213
Query: 112 LFQTHENLEHLAMMERVLGPLPQHM 136
            F+T    E    +++    +P+H+
Sbjct: 214 PFETSCLKETYLRIKKNEYSIPKHI 238

>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7 Length = 311

Iteration: 1
 Score = 49.7 bits (117), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 29/105 (27%), Positives = 49/105 (46%), Gaps = 22/105 (20%)
Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           +H   +IH DLKPEN+LL    +I++ D+ ++                   KV+   S  
Sbjct: 145 LHGKGIIHRDLKPENILLNEDMHIQITDFGTA-------------------KVL---SPE 182
Query: 65  YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG 109
            ++   N  V T  Y +PE++         D+W++GCI+ +L  G
Sbjct: 183 SKQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 227

>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In Complex With A Selective Darpin Length = 315

Iteration: 1
 Score = 49.7 bits (117), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 26/85 (30%), Positives = 46/85 (54%), Gaps = 3/85 (3%)
Query: 55  IKVIDFGSTT---YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEA 111
           +K+ DFG  T   Y+   +  +  T +Y APEV+   G ++  D+WS+GCI+  L  G+ 
Sbjct: 160 VKIGDFGLATKVEYDGERKKTLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKP 219
Query: 112 LFQTHENLEHLAMMERVLGPLPQHM 136
            F+T    E    +++    +P+H+
Sbjct: 220 PFETSCLKETYLRIKKNEYSIPKHI 244

>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In Complex With A Consensus Peptide Length = 301

Iteration: 1
 Score = 49.7 bits (117), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 32/130 (24%), Positives = 57/130 (43%), Gaps = 24/130 (18%)
Query: 2   FAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG 61
            +V+H   +IH D+K +++LL     +K+ D+       K                    
Sbjct: 138 LSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSK-------------------- 177
Query: 62  STTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEH 121
               E P +  +V T ++ APE+I  L +    DIWS+G +++E+  GE  +     L+ 
Sbjct: 178 ----EVPRRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKA 233
Query: 122 LAMMERVLGP 131
           + M+   L P
Sbjct: 234 MKMIRDNLPP 243

>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In Complex With Cgp74514a Length = 303

Iteration: 1
 Score = 49.7 bits (117), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 32/130 (24%), Positives = 57/130 (43%), Gaps = 24/130 (18%)
Query: 2   FAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG 61
            +V+H   +IH D+K +++LL     +K+ D+       K                    
Sbjct: 140 LSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSK-------------------- 179
Query: 62  STTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEH 121
               E P +  +V T ++ APE+I  L +    DIWS+G +++E+  GE  +     L+ 
Sbjct: 180 ----EVPRRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKA 235
Query: 122 LAMMERVLGP 131
           + M+   L P
Sbjct: 236 MKMIRDNLPP 245

>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With Nms-P937 Length = 311

Iteration: 1
 Score = 49.3 bits (116), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 26/85 (30%), Positives = 46/85 (54%), Gaps = 3/85 (3%)
Query: 55  IKVIDFGSTT---YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEA 111
           +K+ DFG  T   Y+   +  +  T +Y APEV+   G ++  D+WS+GCI+  L  G+ 
Sbjct: 156 VKIGDFGLATKVEYDGERKKTLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKP 215
Query: 112 LFQTHENLEHLAMMERVLGPLPQHM 136
            F+T    E    +++    +P+H+
Sbjct: 216 PFETSCLKETYLRIKKNEYSIPKHI 240

>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb Mutant Kinase Domain In Complex With Kt5720 Length = 311

Iteration: 1
 Score = 49.3 bits (116), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 29/108 (26%), Positives = 49/108 (45%), Gaps = 21/108 (19%)
Query: 6   HDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTY 65
           H   +IH D+KP N+L+ ++  +KV D+                    A  + D G++  
Sbjct: 133 HQNGIIHRDVKPANILISATNAVKVVDF------------------GIARAIADSGNSVX 174
Query: 66  ERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALF 113
           +      ++ T  Y +PE   G       D++S+GC+L E+ TGE  F
Sbjct: 175 Q---TAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPF 219

>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A Pyrazoloquinazoline Inhibitor Length = 311

Iteration: 1
 Score = 49.3 bits (116), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 26/85 (30%), Positives = 46/85 (54%), Gaps = 3/85 (3%)
Query: 55  IKVIDFGSTT---YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEA 111
           +K+ DFG  T   Y+   +  +  T +Y APEV+   G ++  D+WS+GCI+  L  G+ 
Sbjct: 156 VKIGDFGLATKVEYDGERKKTLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKP 215
Query: 112 LFQTHENLEHLAMMERVLGPLPQHM 136
            F+T    E    +++    +P+H+
Sbjct: 216 PFETSCLKETYLRIKKNEYSIPKHI 240

>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit Of Camp- Dependent Protein Kinase Length = 350

Iteration: 1
 Score = 49.3 bits (116), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 31/108 (28%), Positives = 48/108 (44%), Gaps = 27/108 (25%)
Query: 2   FAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG 61
           F  +H L +I+ DLKPEN+L+    YI+V D+           + KR+           G
Sbjct: 154 FEYLHSLDLIYRDLKPENLLIDQQGYIQVTDF----------GFAKRVK----------G 193
Query: 62  STTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG 109
            T         +  T  Y AP +IL  G+    D W++G ++ E+  G
Sbjct: 194 RTWX-------LCGTPEYLAPAIILSKGYNKAVDWWALGVLIYEMAAG 234

>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 Length = 292

Iteration: 1
 Score = 49.3 bits (116), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 32/130 (24%), Positives = 57/130 (43%), Gaps = 24/130 (18%)
Query: 2   FAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG 61
            +V+H   +IH D+K +++LL     +K+ D+       K                    
Sbjct: 129 LSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSK-------------------- 168
Query: 62  STTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEH 121
               E P +  +V T ++ APE+I  L +    DIWS+G +++E+  GE  +     L+ 
Sbjct: 169 ----EVPRRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKA 224
Query: 122 LAMMERVLGP 131
           + M+   L P
Sbjct: 225 MKMIRDNLPP 234

>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent Protein Kinase Iib Isoform 1 (camk2b) Length = 295

Iteration: 1
 Score = 49.3 bits (116), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 33/107 (30%), Positives = 45/107 (42%), Gaps = 27/107 (25%)
Query: 6   HDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTY 65
           H + ++H DLKPEN+LL S                          K +A+K+ DFG    
Sbjct: 120 HQMGVVHRDLKPENLLLASK------------------------CKGAAVKLADFGLAIE 155
Query: 66  ERPDQNY---IVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG 109
            + DQ        T  Y +PEV+    +  P DIW+ G IL  L  G
Sbjct: 156 VQGDQQAWFGFAGTPGYLSPEVLRKEAYGKPVDIWACGVILYILLVG 202

>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native Length = 351

Iteration: 1
 Score = 49.3 bits (116), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 34/108 (31%), Positives = 47/108 (43%), Gaps = 29/108 (26%)
Query: 6   HDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTY 65
           HD  +IH D+KPENVLL S E                         S+ +K+ DFG    
Sbjct: 147 HDNNIIHRDVKPENVLLASKE------------------------NSAPVKLGDFG-VAI 181
Query: 66  ERPDQNYI----VSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG 109
           +  +   +    V T H+ APEV+    +  P D+W  G IL  L +G
Sbjct: 182 QLGESGLVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSG 229

>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1 (Plk1) Catalytic Domain In Complex With Adp Length = 317

Iteration: 1
 Score = 49.3 bits (116), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 27/85 (31%), Positives = 46/85 (54%), Gaps = 3/85 (3%)
Query: 55  IKVIDFGSTT---YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEA 111
           +K+ DFG  T   ++   +  +  T +Y APEV+   G ++  DIWS+GCIL  L  G+ 
Sbjct: 181 VKIGDFGLATKIEFDGERKKXLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKP 240
Query: 112 LFQTHENLEHLAMMERVLGPLPQHM 136
            F+T    E    +++    +P+H+
Sbjct: 241 PFETSCLKETYIRIKKNEYSVPRHI 265

>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In Complex With Pf-03758309 Length = 296

Iteration: 1
 Score = 49.3 bits (116), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 32/130 (24%), Positives = 57/130 (43%), Gaps = 24/130 (18%)
Query: 2   FAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG 61
            +V+H   +IH D+K +++LL     +K+ D+       K                    
Sbjct: 133 LSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSK-------------------- 172
Query: 62  STTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEH 121
               E P +  +V T ++ APE+I  L +    DIWS+G +++E+  GE  +     L+ 
Sbjct: 173 ----EVPRRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKA 228
Query: 122 LAMMERVLGP 131
           + M+   L P
Sbjct: 229 MKMIRDNLPP 238

>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1) Catalytic Domain Length = 317

Iteration: 1
 Score = 48.9 bits (115), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 27/85 (31%), Positives = 46/85 (54%), Gaps = 3/85 (3%)
Query: 55  IKVIDFGSTT---YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEA 111
           +K+ DFG  T   ++   +  +  T +Y APEV+   G ++  DIWS+GCIL  L  G+ 
Sbjct: 181 VKIGDFGLATKIEFDGERKKTLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKP 240
Query: 112 LFQTHENLEHLAMMERVLGPLPQHM 136
            F+T    E    +++    +P+H+
Sbjct: 241 PFETSCLKETYIRIKKNEYSVPRHI 265

>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2 (rsk2) Length = 342

Iteration: 1
 Score = 48.9 bits (115), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 30/112 (26%), Positives = 48/112 (42%), Gaps = 26/112 (23%)
Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           +H   ++H DLKP N+L                       Y        +I++ DFG   
Sbjct: 132 LHAQGVVHRDLKPSNIL-----------------------YVDESGNPESIRICDFGFAK 168
Query: 65  YERPDQNYIVS---TRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALF 113
             R +   +++   T ++ APEV+   G+   CDIWS+G +L  + TG   F
Sbjct: 169 QLRAENGLLMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPF 220

>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor Discovered Through Site-Directed Dynamic Tethering Length = 272

Iteration: 1
 Score = 48.9 bits (115), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 34/128 (26%), Positives = 51/128 (39%), Gaps = 26/128 (20%)
Query: 6   HDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTY 65
           H   +IH D+KPEN+LL S+  +K+ D+  S+H P                         
Sbjct: 129 HSKRVIHRDIKPENLLLGSNGELKIADFGWSVHAPSSR---------------------- 166
Query: 66  ERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMM 125
               ++ +  T  Y  PE+I G       D+WS+G +  E   G   F+ H   E    +
Sbjct: 167 ----RDTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGMPPFEAHTYQETYRRI 222
Query: 126 ERVLGPLP 133
            RV    P
Sbjct: 223 SRVEFTFP 230

>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP Length = 311

Iteration: 1
 Score = 48.5 bits (114), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 32/128 (25%), Positives = 58/128 (45%), Gaps = 22/128 (17%)
Query: 6   HDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTY 65
           H   +IH D+KP N+++ ++  +KV D+                    A  + D G++  
Sbjct: 133 HQNGIIHRDVKPANIMISATNAVKVMDF------------------GIARAIADSGNSVT 174
Query: 66  ERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMM 125
           +      ++ T  Y +PE   G       D++S+GC+L E+ TGE  F T ++ + +A  
Sbjct: 175 Q---TAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPF-TGDSPDSVAYQ 230
Query: 126 ERVLGPLP 133
                P+P
Sbjct: 231 HVREDPIP 238

>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like Kinase 1 (Plk1) Catalytic Domain. Length = 317

Iteration: 1
 Score = 48.5 bits (114), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 27/85 (31%), Positives = 46/85 (54%), Gaps = 3/85 (3%)
Query: 55  IKVIDFGSTT---YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEA 111
           +K+ DFG  T   ++   +  +  T +Y APEV+   G ++  DIWS+GCIL  L  G+ 
Sbjct: 181 VKIGDFGLATKIEFDGERKKDLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKP 240
Query: 112 LFQTHENLEHLAMMERVLGPLPQHM 136
            F+T    E    +++    +P+H+
Sbjct: 241 PFETSCLKETYIRIKKNEYSVPRHI 265

>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF Mycobacterium Tuberculosis Pknb. Length = 311

Iteration: 1
 Score = 48.5 bits (114), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 28/108 (25%), Positives = 49/108 (45%), Gaps = 21/108 (19%)
Query: 6   HDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTY 65
           H   +IH D+KP N+++ ++  +KV D+                    A  + D G++  
Sbjct: 133 HQNGIIHRDVKPANIMISATNAVKVMDF------------------GIARAIADSGNSVT 174
Query: 66  ERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALF 113
           +      ++ T  Y +PE   G       D++S+GC+L E+ TGE  F
Sbjct: 175 Q---TAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPF 219

>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of Camp-Dependent Protein Kinase Length = 350

Iteration: 1
 Score = 48.5 bits (114), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 31/108 (28%), Positives = 48/108 (44%), Gaps = 27/108 (25%)
Query: 2   FAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG 61
           F  +H L +I+ DLKPEN+L+    YI+V D+           + KR+           G
Sbjct: 154 FEYLHSLDLIYRDLKPENLLIDQQGYIQVTDF----------GFAKRVK----------G 193
Query: 62  STTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG 109
            T         +  T    APE+IL  G+    D W++G ++ E+  G
Sbjct: 194 RTWX-------LCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAG 234

>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant Length = 311

Iteration: 1
 Score = 48.5 bits (114), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 28/108 (25%), Positives = 49/108 (45%), Gaps = 21/108 (19%)
Query: 6   HDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTY 65
           H   +IH D+KP N+++ ++  +KV D+                    A  + D G++  
Sbjct: 133 HQNGIIHRDVKPANIMISATNAVKVMDF------------------GIARAIADSGNSVT 174
Query: 66  ERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALF 113
           +      ++ T  Y +PE   G       D++S+GC+L E+ TGE  F
Sbjct: 175 Q---TAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPF 219

>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant (Crystal Form 1) Length = 311

Iteration: 1
 Score = 48.5 bits (114), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 28/108 (25%), Positives = 49/108 (45%), Gaps = 21/108 (19%)
Query: 6   HDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTY 65
           H   +IH D+KP N+++ ++  +KV D+                    A  + D G++  
Sbjct: 133 HQNGIIHRDVKPANIMISATNAVKVMDF------------------GIARAIADSGNSVT 174
Query: 66  ERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALF 113
           +      ++ T  Y +PE   G       D++S+GC+L E+ TGE  F
Sbjct: 175 Q---TAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPF 219

>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And Drb Length = 373

Iteration: 1
 Score = 48.5 bits (114), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 32/140 (22%), Positives = 58/140 (41%), Gaps = 21/140 (15%)
Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           +H   ++H D+K  NVL+     +K+ D+                      +       +
Sbjct: 141 IHRNKILHRDMKAANVLITRDGVLKLADF-------------------GLARAFSLAKNS 181
Query: 65  YERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLA 123
                 N +V T  YR PE++LG   +  P D+W  GCI+ E+ T   + Q +     LA
Sbjct: 182 QPNRYXNRVV-TLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLA 240
Query: 124 MMERVLGPLPQHMLKRVDRH 143
           ++ ++ G +   +   VD +
Sbjct: 241 LISQLCGSITPEVWPNVDNY 260

>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like Kinase 1 (Plk1) Catalytic Domain In Complex With Compound 902 Length = 301

Iteration: 1
 Score = 48.1 bits (113), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 27/85 (31%), Positives = 46/85 (54%), Gaps = 3/85 (3%)
Query: 55  IKVIDFGSTT---YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEA 111
           +K+ DFG  T   ++   +  +  T +Y APEV+   G ++  DIWS+GCIL  L  G+ 
Sbjct: 165 VKIGDFGLATKIEFDGERKKDLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKP 224
Query: 112 LFQTHENLEHLAMMERVLGPLPQHM 136
            F+T    E    +++    +P+H+
Sbjct: 225 PFETSCLKETYIRIKKNEYSVPRHI 249

>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium Tuberculosis Length = 299

Iteration: 1
 Score = 48.1 bits (113), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 28/108 (25%), Positives = 49/108 (45%), Gaps = 21/108 (19%)
Query: 6   HDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTY 65
           H   +IH D+KP N+++ ++  +KV D+                    A  + D G++  
Sbjct: 150 HQNGIIHRDVKPANIMISATNAVKVMDF------------------GIARAIADSGNSVT 191
Query: 66  ERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALF 113
           +      ++ T  Y +PE   G       D++S+GC+L E+ TGE  F
Sbjct: 192 Q---TAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPF 236

>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679 Length = 279

Iteration: 1
 Score = 48.1 bits (113), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 33/128 (25%), Positives = 52/128 (40%), Gaps = 26/128 (20%)
Query: 6   HDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTY 65
           H   +IH D+KPEN+LL S+  +K+ D+  S+H P                         
Sbjct: 126 HSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---------------------- 163
Query: 66  ERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMM 125
               ++ +  T  Y  PE+I G       D+WS+G +  E   G+  F+ +   E    +
Sbjct: 164 ----RDTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI 219
Query: 126 ERVLGPLP 133
            RV    P
Sbjct: 220 SRVEFTFP 227

>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240->arg, Met302- >leu) In Complex With 1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]- Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea Length = 272

Iteration: 1
 Score = 48.1 bits (113), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 34/128 (26%), Positives = 50/128 (39%), Gaps = 26/128 (20%)
Query: 6   HDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTY 65
           H   +IH D+KPEN+LL S+  +K+ D+  S+H P                         
Sbjct: 129 HSKRVIHRDIKPENLLLGSNGELKIADFGWSVHAPSSR---------------------- 166
Query: 66  ERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMM 125
               +  +  T  Y  PE+I G       D+WS+G +  E   G   F+ H   E    +
Sbjct: 167 ----RTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGMPPFEAHTYQETYRRI 222
Query: 126 ERVLGPLP 133
            RV    P
Sbjct: 223 SRVEFTFP 230

>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A Inhibitors: Structure Basis For Potency And Specificity Length = 279

Iteration: 1
 Score = 48.1 bits (113), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 35/128 (27%), Positives = 53/128 (41%), Gaps = 26/128 (20%)
Query: 6   HDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTY 65
           H   +IH D+KPEN+LL S+  +K+ D+  S+H P                       + 
Sbjct: 126 HSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAP-----------------------SS 162
Query: 66  ERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMM 125
            R D   +  T  Y  PE+I G       D+WS+G +  E   G+  F+ +   E    +
Sbjct: 163 RRTD---LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI 219
Query: 126 ERVLGPLP 133
            RV    P
Sbjct: 220 SRVEFTFP 227

>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb Length = 351

Iteration: 1
 Score = 48.1 bits (113), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 32/140 (22%), Positives = 58/140 (41%), Gaps = 21/140 (15%)
Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           +H   ++H D+K  NVL+     +K+ D+                      +       +
Sbjct: 140 IHRNKILHRDMKAANVLITRDGVLKLADF-------------------GLARAFSLAKNS 180
Query: 65  YERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLA 123
                 N +V T  YR PE++LG   +  P D+W  GCI+ E+ T   + Q +     LA
Sbjct: 181 QPNRYXNRVV-TLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLA 239
Query: 124 MMERVLGPLPQHMLKRVDRH 143
           ++ ++ G +   +   VD +
Sbjct: 240 LISQLCGSITPEVWPNVDNY 259

>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound Length = 279

Iteration: 1
 Score = 48.1 bits (113), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 28/99 (28%), Positives = 44/99 (44%), Gaps = 24/99 (24%)
Query: 10  MIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD 69
           ++H DLKP NV L   + +K+ D+  +     D+S+ K                      
Sbjct: 137 VLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKT--------------------- 175
Query: 70  QNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT 108
               V T +Y +PE +  + +    DIWS+GC+L ELC 
Sbjct: 176 ---FVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCA 211

>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A 5-Aminopyrimidinyl Quinazoline Inhibitor Length = 283

Iteration: 1
 Score = 48.1 bits (113), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 35/128 (27%), Positives = 53/128 (41%), Gaps = 26/128 (20%)
Query: 6   HDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTY 65
           H   +IH D+KPEN+LL S+  +K+ D+  S+H P                       + 
Sbjct: 130 HSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAP-----------------------SS 166
Query: 66  ERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMM 125
            R D   +  T  Y  PE+I G       D+WS+G +  E   G+  F+ +   E    +
Sbjct: 167 RRTD---LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI 223
Query: 126 ERVLGPLP 133
            RV    P
Sbjct: 224 SRVEFTFP 231

>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With Adpnp Length = 275

Iteration: 1
 Score = 48.1 bits (113), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 35/128 (27%), Positives = 53/128 (41%), Gaps = 26/128 (20%)
Query: 6   HDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTY 65
           H   +IH D+KPEN+LL S+  +K+ D+  S+H P                       + 
Sbjct: 125 HSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAP-----------------------SS 161
Query: 66  ERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMM 125
            R D   +  T  Y  PE+I G       D+WS+G +  E   G+  F+ +   E    +
Sbjct: 162 RRTD---LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI 218
Query: 126 ERVLGPLP 133
            RV    P
Sbjct: 219 SRVEFTFP 226

>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 Length = 331

Iteration: 1
 Score = 48.1 bits (113), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 32/140 (22%), Positives = 58/140 (41%), Gaps = 21/140 (15%)
Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           +H   ++H D+K  NVL+     +K+ D+                      +       +
Sbjct: 141 IHRNKILHRDMKAANVLITRDGVLKLADF-------------------GLARAFSLAKNS 181
Query: 65  YERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLA 123
                 N +V T  YR PE++LG   +  P D+W  GCI+ E+ T   + Q +     LA
Sbjct: 182 QPNRYXNRVV-TLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLA 240
Query: 124 MMERVLGPLPQHMLKRVDRH 143
           ++ ++ G +   +   VD +
Sbjct: 241 LISQLCGSITPEVWPNVDNY 260

>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand Length = 279

Iteration: 1
 Score = 48.1 bits (113), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 28/99 (28%), Positives = 44/99 (44%), Gaps = 24/99 (24%)
Query: 10  MIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD 69
           ++H DLKP NV L   + +K+ D+  +     D+S+ K                      
Sbjct: 137 VLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKA--------------------- 175
Query: 70  QNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT 108
               V T +Y +PE +  + +    DIWS+GC+L ELC 
Sbjct: 176 ---FVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCA 211

>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A 2-amino-4- Heteroaryl-pyrimidine Inhibitor Length = 331

Iteration: 1
 Score = 47.8 bits (112), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 32/140 (22%), Positives = 58/140 (41%), Gaps = 21/140 (15%)
Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           +H   ++H D+K  NVL+     +K+ D+                      +       +
Sbjct: 141 IHRNKILHRDMKAANVLITRDGVLKLADF-------------------GLARAFSLAKNS 181
Query: 65  YERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLA 123
                 N +V T  YR PE++LG   +  P D+W  GCI+ E+ T   + Q +     LA
Sbjct: 182 QPNRYXNRVV-TLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLA 240
Query: 124 MMERVLGPLPQHMLKRVDRH 143
           ++ ++ G +   +   VD +
Sbjct: 241 LISQLCGSITPEVWPNVDNY 260

>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex With Indazole Derivative (Compound 18) Length = 410

Iteration: 1
 Score = 47.8 bits (112), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 31/114 (27%), Positives = 51/114 (44%), Gaps = 27/114 (23%)
Query: 4   VMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGST 63
            +H +  IH D+KP+N+LL  S ++K+ D+ + +          +M K   ++       
Sbjct: 183 AIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCM----------KMNKEGMVRC------ 226
Query: 64  TYERPDQNYIVSTRHYRAPEVILGLG----WTYPCDIWSVGCILVELCTGEALF 113
                  +  V T  Y +PEV+   G    +   CD WSVG  L E+  G+  F
Sbjct: 227 -------DTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPF 273

>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure Length = 285

Iteration: 1
 Score = 47.8 bits (112), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 33/128 (25%), Positives = 51/128 (39%), Gaps = 26/128 (20%)
Query: 6   HDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTY 65
           H   +IH D+KPEN+LL S+  +K+ D+  S+H P                         
Sbjct: 130 HSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---------------------- 167
Query: 66  ERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMM 125
               +  +  T  Y  PE+I G       D+WS+G +  E   G+  F+ +   E    +
Sbjct: 168 ----RXXLXGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI 223
Query: 126 ERVLGPLP 133
            RV    P
Sbjct: 224 SRVEFTFP 231

>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic Domain Of Death-Associated Protein Kinase With Atp Analogue And Mn. Length = 294

Iteration: 1
 Score = 47.8 bits (112), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 42/153 (27%), Positives = 63/153 (41%), Gaps = 35/153 (22%)
Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG--- 61
           +H L + H DLKPEN++L+                       + +PK   IK+IDFG   
Sbjct: 129 LHSLQIAHFDLKPENIMLLD----------------------RNVPKPR-IKIIDFGLAH 165
Query: 62  STTYERPDQNYIVSTRHYRAPEVI----LGLGWTYPCDIWSVGCILVELCTGEALFQTHE 117
              +    +N I  T  + APE++    LGL      D+WS+G I   L +G + F    
Sbjct: 166 KIDFGNEFKN-IFGTPEFVAPEIVNYEPLGL----EADMWSIGVITYILLSGASPFLGDT 220
Query: 118 NLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRR 150
             E LA +  V               A+ ++RR
Sbjct: 221 KQETLANVSAVNYEFEDEYFSNTSALAKDFIRR 253

>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A Gsk3beta Inhibitor Length = 287

Iteration: 1
 Score = 47.8 bits (112), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 35/128 (27%), Positives = 53/128 (41%), Gaps = 26/128 (20%)
Query: 6   HDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTY 65
           H   +IH D+KPEN+LL S+  +K+ D+  S+H P                       + 
Sbjct: 125 HSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAP-----------------------SS 161
Query: 66  ERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMM 125
            R D   +  T  Y  PE+I G       D+WS+G +  E   G+  F+ +   E    +
Sbjct: 162 RRTD---LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI 218
Query: 126 ERVLGPLP 133
            RV    P
Sbjct: 219 SRVEFTFP 226

>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And Tpx2 Length = 268

Iteration: 1
 Score = 47.8 bits (112), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 33/128 (25%), Positives = 51/128 (39%), Gaps = 26/128 (20%)
Query: 6   HDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTY 65
           H   +IH D+KPEN+LL S+  +K+ D+  S+H P                         
Sbjct: 125 HSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---------------------- 162
Query: 66  ERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMM 125
               +  +  T  Y  PE+I G       D+WS+G +  E   G+  F+ +   E    +
Sbjct: 163 ----RTXLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI 218
Query: 126 ERVLGPLP 133
            RV    P
Sbjct: 219 SRVEFTFP 226

>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine Length = 295

Iteration: 1
 Score = 47.8 bits (112), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 42/153 (27%), Positives = 63/153 (41%), Gaps = 35/153 (22%)
Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG--- 61
           +H L + H DLKPEN++L+                       + +PK   IK+IDFG   
Sbjct: 130 LHSLQIAHFDLKPENIMLLD----------------------RNVPKPR-IKIIDFGLAH 166
Query: 62  STTYERPDQNYIVSTRHYRAPEVI----LGLGWTYPCDIWSVGCILVELCTGEALFQTHE 117
              +    +N I  T  + APE++    LGL      D+WS+G I   L +G + F    
Sbjct: 167 KIDFGNEFKN-IFGTPEFVAPEIVNYEPLGL----EADMWSIGVITYILLSGASPFLGDT 221
Query: 118 NLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRR 150
             E LA +  V               A+ ++RR
Sbjct: 222 KQETLANVSAVNYEFEDEYFSNTSALAKDFIRR 254

>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form) Length = 285

Iteration: 1
 Score = 47.8 bits (112), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 33/128 (25%), Positives = 51/128 (39%), Gaps = 26/128 (20%)
Query: 6   HDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTY 65
           H   +IH D+KPEN+LL S+  +K+ D+  S+H P                         
Sbjct: 130 HSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---------------------- 167
Query: 66  ERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMM 125
               +  +  T  Y  PE+I G       D+WS+G +  E   G+  F+ +   E    +
Sbjct: 168 ----RTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI 223
Query: 126 ERVLGPLP 133
            RV    P
Sbjct: 224 SRVEFTFP 231

>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil Length = 415

Iteration: 1
 Score = 47.8 bits (112), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 31/114 (27%), Positives = 51/114 (44%), Gaps = 27/114 (23%)
Query: 4   VMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGST 63
            +H +  IH D+KP+N+LL  S ++K+ D+ + +          +M K   ++       
Sbjct: 188 AIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCM----------KMNKEGMVRC------ 231
Query: 64  TYERPDQNYIVSTRHYRAPEVILGLG----WTYPCDIWSVGCILVELCTGEALF 113
                  +  V T  Y +PEV+   G    +   CD WSVG  L E+  G+  F
Sbjct: 232 -------DTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPF 278

>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With Bound Inhibitor Fragment Length = 293

Iteration: 1
 Score = 47.8 bits (112), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 42/153 (27%), Positives = 63/153 (41%), Gaps = 35/153 (22%)
Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG--- 61
           +H L + H DLKPEN++L+                       + +PK   IK+IDFG   
Sbjct: 129 LHSLQIAHFDLKPENIMLLD----------------------RNVPKPR-IKIIDFGLAH 165
Query: 62  STTYERPDQNYIVSTRHYRAPEVI----LGLGWTYPCDIWSVGCILVELCTGEALFQTHE 117
              +    +N I  T  + APE++    LGL      D+WS+G I   L +G + F    
Sbjct: 166 KIDFGNEFKN-IFGTPEFVAPEIVNYEPLGL----EADMWSIGVITYILLSGASPFLGDT 220
Query: 118 NLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRR 150
             E LA +  V               A+ ++RR
Sbjct: 221 KQETLANVSAVNYEFEDEYFSNTSALAKDFIRR 253

>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe Complex Structure Length = 406

Iteration: 1
 Score = 47.8 bits (112), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 31/114 (27%), Positives = 51/114 (44%), Gaps = 27/114 (23%)
Query: 4   VMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGST 63
            +H +  IH D+KP+N+LL  S ++K+ D+ + +          +M K   ++       
Sbjct: 188 AIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCM----------KMNKEGMVRC------ 231
Query: 64  TYERPDQNYIVSTRHYRAPEVILGLG----WTYPCDIWSVGCILVELCTGEALF 113
                  +  V T  Y +PEV+   G    +   CD WSVG  L E+  G+  F
Sbjct: 232 -------DTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPF 278

>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302 Length = 302

Iteration: 1
 Score = 47.8 bits (112), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 42/153 (27%), Positives = 63/153 (41%), Gaps = 35/153 (22%)
Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG--- 61
           +H L + H DLKPEN++L+                       + +PK   IK+IDFG   
Sbjct: 130 LHSLQIAHFDLKPENIMLLD----------------------RNVPKPR-IKIIDFGLAH 166
Query: 62  STTYERPDQNYIVSTRHYRAPEVI----LGLGWTYPCDIWSVGCILVELCTGEALFQTHE 117
              +    +N I  T  + APE++    LGL      D+WS+G I   L +G + F    
Sbjct: 167 KIDFGNEFKN-IFGTPEFVAPEIVNYEPLGL----EADMWSIGVITYILLSGASPFLGDT 221
Query: 118 NLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRR 150
             E LA +  V               A+ ++RR
Sbjct: 222 KQETLANVSAVNYEFEDEYFSNTSALAKDFIRR 254

>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase Length = 272

Iteration: 1
 Score = 47.8 bits (112), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 33/128 (25%), Positives = 51/128 (39%), Gaps = 26/128 (20%)
Query: 6   HDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTY 65
           H   +IH D+KPEN+LL S+  +K+ D+  S+H P                         
Sbjct: 129 HSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---------------------- 166
Query: 66  ERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMM 125
               +  +  T  Y  PE+I G       D+WS+G +  E   G+  F+ +   E    +
Sbjct: 167 ----RTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI 222
Query: 126 ERVLGPLP 133
            RV    P
Sbjct: 223 SRVEFTFP 230

>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus SerineTHREONINE KINASE Pknb Length = 294

Iteration: 1
 Score = 47.8 bits (112), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 28/109 (25%), Positives = 52/109 (47%), Gaps = 23/109 (21%)
Query: 6   HDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTY 65
           HD+ ++H D+KP+N+L+ S++ +K+ D+             K + ++S  +         
Sbjct: 128 HDMRIVHRDIKPQNILIDSNKTLKIFDF----------GIAKALSETSLTQT-------- 169
Query: 66  ERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQ 114
                N+++ T  Y +PE   G       DI+S+G +L E+  GE  F 
Sbjct: 170 -----NHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFN 213

>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa Length = 267

Iteration: 1
 Score = 47.8 bits (112), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 33/128 (25%), Positives = 51/128 (39%), Gaps = 26/128 (20%)
Query: 6   HDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTY 65
           H   +IH D+KPEN+LL S+  +K+ D+  S+H P                         
Sbjct: 124 HSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---------------------- 161
Query: 66  ERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMM 125
               +  +  T  Y  PE+I G       D+WS+G +  E   G+  F+ +   E    +
Sbjct: 162 ----RTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI 217
Query: 126 ERVLGPLP 133
            RV    P
Sbjct: 218 SRVEFTFP 225

>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase In Complex With Amppnp And Mg2+ Length = 295

Iteration: 1
 Score = 47.8 bits (112), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 42/153 (27%), Positives = 63/153 (41%), Gaps = 35/153 (22%)
Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG--- 61
           +H L + H DLKPEN++L+                       + +PK   IK+IDFG   
Sbjct: 130 LHSLQIAHFDLKPENIMLLD----------------------RNVPKPR-IKIIDFGLAH 166
Query: 62  STTYERPDQNYIVSTRHYRAPEVI----LGLGWTYPCDIWSVGCILVELCTGEALFQTHE 117
              +    +N I  T  + APE++    LGL      D+WS+G I   L +G + F    
Sbjct: 167 KIDFGNEFKN-IFGTPEFVAPEIVNYEPLGL----EADMWSIGVITYILLSGASPFLGDT 221
Query: 118 NLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRR 150
             E LA +  V               A+ ++RR
Sbjct: 222 KQETLANVSAVNYEFEDEYFSNTSALAKDFIRR 254

>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp Length = 295

Iteration: 1
 Score = 47.8 bits (112), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 42/153 (27%), Positives = 63/153 (41%), Gaps = 35/153 (22%)
Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG--- 61
           +H L + H DLKPEN++L+                       + +PK   IK+IDFG   
Sbjct: 130 LHSLQIAHFDLKPENIMLLD----------------------RNVPKPR-IKIIDFGLAH 166
Query: 62  STTYERPDQNYIVSTRHYRAPEVI----LGLGWTYPCDIWSVGCILVELCTGEALFQTHE 117
              +    +N I  T  + APE++    LGL      D+WS+G I   L +G + F    
Sbjct: 167 KIDFGNEFKN-IFGTPEFVAPEIVNYEPLGL----EADMWSIGVITYILLSGASPFLGDT 221
Query: 118 NLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRR 150
             E LA +  V               A+ ++RR
Sbjct: 222 KQETLANVSAVNYEFEDEYFSNTSALAKDFIRR 254

>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine Inhibitor Length = 283

Iteration: 1
 Score = 47.8 bits (112), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 33/128 (25%), Positives = 51/128 (39%), Gaps = 26/128 (20%)
Query: 6   HDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTY 65
           H   +IH D+KPEN+LL S+  +K+ D+  S+H P                         
Sbjct: 128 HSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---------------------- 165
Query: 66  ERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMM 125
               +  +  T  Y  PE+I G       D+WS+G +  E   G+  F+ +   E    +
Sbjct: 166 ----RTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI 221
Query: 126 ERVLGPLP 133
            RV    P
Sbjct: 222 SRVEFTFP 229

>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632 Length = 306

Iteration: 1
 Score = 47.8 bits (112), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 34/123 (27%), Positives = 52/123 (42%), Gaps = 26/123 (21%)
Query: 6   HDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTY 65
           H   +IH D+KPEN+LL S+  +K+ D+  S+H P                       + 
Sbjct: 151 HSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAP-----------------------SS 187
Query: 66  ERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMM 125
            R D   +  T  Y  PE+I G       D+WS+G +  E   G+  F+ +   E    +
Sbjct: 188 RRDD---LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI 244
Query: 126 ERV 128
            RV
Sbjct: 245 SRV 247

>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of Pyrazolopyridine- Sulfonamides As Potent Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I) Length = 271

Iteration: 1
 Score = 47.8 bits (112), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 34/123 (27%), Positives = 52/123 (42%), Gaps = 26/123 (21%)
Query: 6   HDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTY 65
           H   +IH D+KPEN+LL S+  +K+ D+  S+H P                       + 
Sbjct: 128 HSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAP-----------------------SS 164
Query: 66  ERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMM 125
            R D   +  T  Y  PE+I G       D+WS+G +  E   G+  F+ +   E    +
Sbjct: 165 RRDD---LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI 221
Query: 126 ERV 128
            RV
Sbjct: 222 SRV 224

>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The Death Associated Protein Kinase Catalytic Domain With Amppnp Length = 295

Iteration: 1
 Score = 47.8 bits (112), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 42/153 (27%), Positives = 63/153 (41%), Gaps = 35/153 (22%)
Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG--- 61
           +H L + H DLKPEN++L+                       + +PK   IK+IDFG   
Sbjct: 130 LHSLQIAHFDLKPENIMLLD----------------------RNVPKPR-IKIIDFGLAH 166
Query: 62  STTYERPDQNYIVSTRHYRAPEVI----LGLGWTYPCDIWSVGCILVELCTGEALFQTHE 117
              +    +N I  T  + APE++    LGL      D+WS+G I   L +G + F    
Sbjct: 167 KIDFGNEFKN-IFGTPEFVAPEIVNYEPLGL----EADMWSIGVITYILLSGASPFLGDT 221
Query: 118 NLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRR 150
             E LA +  V               A+ ++RR
Sbjct: 222 KQETLANVSAVNYEFEDEYFSNTSALAKDFIRR 254

>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor Length = 285

Iteration: 1
 Score = 47.8 bits (112), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 33/128 (25%), Positives = 51/128 (39%), Gaps = 26/128 (20%)
Query: 6   HDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTY 65
           H   +IH D+KPEN+LL S+  +K+ D+  S+H P                         
Sbjct: 130 HSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---------------------- 167
Query: 66  ERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMM 125
               +  +  T  Y  PE+I G       D+WS+G +  E   G+  F+ +   E    +
Sbjct: 168 ----RTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI 223
Query: 126 ERVLGPLP 133
            RV    P
Sbjct: 224 SRVEFTFP 231

>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358 Length = 280

Iteration: 1
 Score = 47.8 bits (112), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 33/128 (25%), Positives = 51/128 (39%), Gaps = 26/128 (20%)
Query: 6   HDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTY 65
           H   +IH D+KPEN+LL S+  +K+ D+  S+H P                         
Sbjct: 125 HSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---------------------- 162
Query: 66  ERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMM 125
               +  +  T  Y  PE+I G       D+WS+G +  E   G+  F+ +   E    +
Sbjct: 163 ----RTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI 218
Query: 126 ERVLGPLP 133
            RV    P
Sbjct: 219 SRVEFTFP 226

>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With Inhibitor Length = 275

Iteration: 1
 Score = 47.8 bits (112), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 33/128 (25%), Positives = 51/128 (39%), Gaps = 26/128 (20%)
Query: 6   HDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTY 65
           H   +IH D+KPEN+LL S+  +K+ D+  S+H P                         
Sbjct: 128 HSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---------------------- 165
Query: 66  ERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMM 125
               +  +  T  Y  PE+I G       D+WS+G +  E   G+  F+ +   E    +
Sbjct: 166 ----RTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI 221
Query: 126 ERVLGPLP 133
            RV    P
Sbjct: 222 SRVEFTFP 229

>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In Complex With Small Molecular Inhibitors Length = 278

Iteration: 1
 Score = 47.8 bits (112), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 42/153 (27%), Positives = 63/153 (41%), Gaps = 35/153 (22%)
Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG--- 61
           +H L + H DLKPEN++L+                       + +PK   IK+IDFG   
Sbjct: 130 LHSLQIAHFDLKPENIMLLD----------------------RNVPKPR-IKIIDFGLAH 166
Query: 62  STTYERPDQNYIVSTRHYRAPEVI----LGLGWTYPCDIWSVGCILVELCTGEALFQTHE 117
              +    +N I  T  + APE++    LGL      D+WS+G I   L +G + F    
Sbjct: 167 KIDFGNEFKN-IFGTPEFVAPEIVNYEPLGL----EADMWSIGVITYILLSGASPFLGDT 221
Query: 118 NLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRR 150
             E LA +  V               A+ ++RR
Sbjct: 222 KQETLANVSAVNYEFEDEYFSNTSALAKDFIRR 254

>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277 Length = 277

Iteration: 1
 Score = 47.8 bits (112), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 42/153 (27%), Positives = 63/153 (41%), Gaps = 35/153 (22%)
Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG--- 61
           +H L + H DLKPEN++L+                       + +PK   IK+IDFG   
Sbjct: 130 LHSLQIAHFDLKPENIMLLD----------------------RNVPKPR-IKIIDFGLAH 166
Query: 62  STTYERPDQNYIVSTRHYRAPEVI----LGLGWTYPCDIWSVGCILVELCTGEALFQTHE 117
              +    +N I  T  + APE++    LGL      D+WS+G I   L +G + F    
Sbjct: 167 KIDFGNEFKN-IFGTPEFVAPEIVNYEPLGL----EADMWSIGVITYILLSGASPFLGDT 221
Query: 118 NLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRR 150
             E LA +  V               A+ ++RR
Sbjct: 222 KQETLANVSAVNYEFEDEYFSNTSALAKDFIRR 254

>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In Complex With A Ruthenium Octasporine Ligand (Osv) Length = 285

Iteration: 1
 Score = 47.4 bits (111), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 42/153 (27%), Positives = 63/153 (41%), Gaps = 35/153 (22%)
Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG--- 61
           +H L + H DLKPEN++L+                       + +PK   IK+IDFG   
Sbjct: 130 LHSLQIAHFDLKPENIMLLD----------------------RNVPKPR-IKIIDFGLAH 166
Query: 62  STTYERPDQNYIVSTRHYRAPEVI----LGLGWTYPCDIWSVGCILVELCTGEALFQTHE 117
              +    +N I  T  + APE++    LGL      D+WS+G I   L +G + F    
Sbjct: 167 KIDFGNEFKN-IFGTPEFVAPEIVNYEPLGL----EADMWSIGVITYILLSGASPFLGDT 221
Query: 118 NLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRR 150
             E LA +  V               A+ ++RR
Sbjct: 222 KQETLANVSAVNYEFEDEYFSNTSALAKDFIRR 254

>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant Length = 262

Iteration: 1
 Score = 47.4 bits (111), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 33/128 (25%), Positives = 51/128 (39%), Gaps = 26/128 (20%)
Query: 6   HDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTY 65
           H   +IH D+KPEN+LL S+  +K+ D+  S+H P                         
Sbjct: 122 HSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---------------------- 159
Query: 66  ERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMM 125
               +  +  T  Y  PE+I G       D+WS+G +  E   G+  F+ +   E    +
Sbjct: 160 ----RTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI 215
Query: 126 ERVLGPLP 133
            RV    P
Sbjct: 216 SRVEFTFP 223

>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287, Thr288 And Bound To Tpx2 1-43 Length = 282

Iteration: 1
 Score = 47.4 bits (111), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 33/128 (25%), Positives = 51/128 (39%), Gaps = 26/128 (20%)
Query: 6   HDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTY 65
           H   +IH D+KPEN+LL S+  +K+ D+  S+H P                         
Sbjct: 127 HSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---------------------- 164
Query: 66  ERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMM 125
               +  +  T  Y  PE+I G       D+WS+G +  E   G+  F+ +   E    +
Sbjct: 165 ----RXXLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI 220
Query: 126 ERVLGPLP 133
            RV    P
Sbjct: 221 SRVEFTFP 228

>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304 Length = 326

Iteration: 1
 Score = 47.4 bits (111), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 42/153 (27%), Positives = 63/153 (41%), Gaps = 35/153 (22%)
Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG--- 61
           +H L + H DLKPEN++L+                       + +PK   IK+IDFG   
Sbjct: 130 LHSLQIAHFDLKPENIMLLD----------------------RNVPKPR-IKIIDFGLAH 166
Query: 62  STTYERPDQNYIVSTRHYRAPEVI----LGLGWTYPCDIWSVGCILVELCTGEALFQTHE 117
              +    +N I  T  + APE++    LGL      D+WS+G I   L +G + F    
Sbjct: 167 KIDFGNEFKN-IFGTPEFVAPEIVNYEPLGL----EADMWSIGVITYILLSGASPFLGDT 221
Query: 118 NLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRR 150
             E LA +  V               A+ ++RR
Sbjct: 222 KQETLANVSAVNYEFEDEYFSNTSALAKDFIRR 254

>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With Inhibitor Length = 275

Iteration: 1
 Score = 47.4 bits (111), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 33/128 (25%), Positives = 51/128 (39%), Gaps = 26/128 (20%)
Query: 6   HDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTY 65
           H   +IH D+KPEN+LL S+  +K+ D+  S+H P                         
Sbjct: 128 HSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---------------------- 165
Query: 66  ERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMM 125
               +  +  T  Y  PE+I G       D+WS+G +  E   G+  F+ +   E    +
Sbjct: 166 ----RXXLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI 221
Query: 126 ERVLGPLP 133
            RV    P
Sbjct: 222 SRVEFTFP 229

>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp Length = 285

Iteration: 1
 Score = 47.4 bits (111), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 33/128 (25%), Positives = 50/128 (39%), Gaps = 26/128 (20%)
Query: 6   HDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTY 65
           H   +IH D+KPEN+LL S+  +K+ D+  S+H P                         
Sbjct: 130 HSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---------------------- 167
Query: 66  ERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMM 125
               +  +  T  Y  PE I G       D+WS+G +  E   G+  F+ +   E    +
Sbjct: 168 ----RTTLCGTLDYLPPEXIEGRXHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI 223
Query: 126 ERVLGPLP 133
            RV    P
Sbjct: 224 SRVEFTFP 231

>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300 Length = 280

Iteration: 1
 Score = 47.4 bits (111), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 33/128 (25%), Positives = 51/128 (39%), Gaps = 26/128 (20%)
Query: 6   HDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTY 65
           H   +IH D+KPEN+LL S+  +K+ D+  S+H P                         
Sbjct: 125 HSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---------------------- 162
Query: 66  ERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMM 125
               +  +  T  Y  PE+I G       D+WS+G +  E   G+  F+ +   E    +
Sbjct: 163 ----RTELCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI 218
Query: 126 ERVLGPLP 133
            RV    P
Sbjct: 219 SRVEFTFP 226

>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And Compound 10 Length = 268

Iteration: 1
 Score = 47.4 bits (111), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 33/128 (25%), Positives = 51/128 (39%), Gaps = 26/128 (20%)
Query: 6   HDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTY 65
           H   +IH D+KPEN+LL S+  +K+ D+  S+H P                         
Sbjct: 125 HSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---------------------- 162
Query: 66  ERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMM 125
               +  +  T  Y  PE+I G       D+WS+G +  E   G+  F+ +   E    +
Sbjct: 163 ----RXXLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI 218
Query: 126 ERVLGPLP 133
            RV    P
Sbjct: 219 SRVEFTFP 226

>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase Kinase 5 Length = 295

Iteration: 1
 Score = 47.4 bits (111), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 32/114 (28%), Positives = 51/114 (44%), Gaps = 31/114 (27%)
Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGST- 63
           +HD  ++H D+K +NVL+                    ++Y      S  +K+ DFG++ 
Sbjct: 138 LHDNQIVHRDIKGDNVLI--------------------NTY------SGVLKISDFGTSK 171
Query: 64  --TYERPDQNYIVSTRHYRAPEVILG--LGWTYPCDIWSVGCILVELCTGEALF 113
                 P       T  Y APE+I     G+    DIWS+GC ++E+ TG+  F
Sbjct: 172 RLAGINPCTETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPF 225

>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312 Length = 312

Iteration: 1
 Score = 47.4 bits (111), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 42/153 (27%), Positives = 63/153 (41%), Gaps = 35/153 (22%)
Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG--- 61
           +H L + H DLKPEN++L+                       + +PK   IK+IDFG   
Sbjct: 130 LHSLQIAHFDLKPENIMLLD----------------------RNVPKPR-IKIIDFGLAH 166
Query: 62  STTYERPDQNYIVSTRHYRAPEVI----LGLGWTYPCDIWSVGCILVELCTGEALFQTHE 117
              +    +N I  T  + APE++    LGL      D+WS+G I   L +G + F    
Sbjct: 167 KIDFGNEFKN-IFGTPEFVAPEIVNYEPLGL----EADMWSIGVITYILLSGASPFLGDT 221
Query: 118 NLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRR 150
             E LA +  V               A+ ++RR
Sbjct: 222 KQETLANVSAVNYEFEDEYFSNTSALAKDFIRR 254

>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine- Threonine Kinase Length = 297

Iteration: 1
 Score = 47.4 bits (111), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 33/128 (25%), Positives = 51/128 (39%), Gaps = 26/128 (20%)
Query: 6   HDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTY 65
           H   +IH D+KPEN+LL S+  +K+ D+  S+H P                         
Sbjct: 142 HSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---------------------- 179
Query: 66  ERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMM 125
               +  +  T  Y  PE+I G       D+WS+G +  E   G+  F+ +   E    +
Sbjct: 180 ----RTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI 235
Query: 126 ERVLGPLP 133
            RV    P
Sbjct: 236 SRVEFTFP 243

>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex Length = 334

Iteration: 1
 Score = 47.4 bits (111), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 42/153 (27%), Positives = 63/153 (41%), Gaps = 35/153 (22%)
Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG--- 61
           +H L + H DLKPEN++L+                       + +PK   IK+IDFG   
Sbjct: 130 LHSLQIAHFDLKPENIMLLD----------------------RNVPKPR-IKIIDFGLAH 166
Query: 62  STTYERPDQNYIVSTRHYRAPEVI----LGLGWTYPCDIWSVGCILVELCTGEALFQTHE 117
              +    +N I  T  + APE++    LGL      D+WS+G I   L +G + F    
Sbjct: 167 KIDFGNEFKN-IFGTPEFVAPEIVNYEPLGL----EADMWSIGVITYILLSGASPFLGDT 221
Query: 118 NLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRR 150
             E LA +  V               A+ ++RR
Sbjct: 222 KQETLANVSAVNYEFEDEYFSNTSALAKDFIRR 254

>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626 Length = 306

Iteration: 1
 Score = 47.4 bits (111), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 32/123 (26%), Positives = 50/123 (40%), Gaps = 26/123 (21%)
Query: 6   HDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTY 65
           H   +IH D+KPEN+LL S+  +K+ D+  S+H P                         
Sbjct: 151 HSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---------------------- 188
Query: 66  ERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMM 125
               +  +  T  Y  PE+I G       D+WS+G +  E   G+  F+ +   E    +
Sbjct: 189 ----RTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI 244
Query: 126 ERV 128
            RV
Sbjct: 245 SRV 247

>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors Length = 283

Iteration: 1
 Score = 47.4 bits (111), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 33/128 (25%), Positives = 51/128 (39%), Gaps = 26/128 (20%)
Query: 6   HDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTY 65
           H   +IH D+KPEN+LL S+  +K+ D+  S+H P                         
Sbjct: 128 HSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---------------------- 165
Query: 66  ERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMM 125
               +  +  T  Y  PE+I G       D+WS+G +  E   G+  F+ +   E    +
Sbjct: 166 ----RAALCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI 221
Query: 126 ERVLGPLP 133
            RV    P
Sbjct: 222 SRVEFTFP 229

>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine Length = 268

Iteration: 1
 Score = 47.4 bits (111), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 33/128 (25%), Positives = 51/128 (39%), Gaps = 26/128 (20%)
Query: 6   HDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTY 65
           H   +IH D+KPEN+LL S+  +K+ D+  S+H P                         
Sbjct: 125 HSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---------------------- 162
Query: 66  ERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMM 125
               +  +  T  Y  PE+I G       D+WS+G +  E   G+  F+ +   E    +
Sbjct: 163 ----RAALCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI 218
Query: 126 ERVLGPLP 133
            RV    P
Sbjct: 219 SRVEFTFP 226

>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2: Se-Met Derivative Length = 342

Iteration: 1
 Score = 47.0 bits (110), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 30/112 (26%), Positives = 46/112 (41%), Gaps = 26/112 (23%)
Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           +H   ++H DLKP N+L                       Y        +I++ DFG   
Sbjct: 132 LHAQGVVHRDLKPSNIL-----------------------YVDESGNPESIRICDFGFAK 168
Query: 65  YERPDQNYIVS---TRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALF 113
             R +   + +   T ++ APEV+   G+   CDIWS+G +L    TG   F
Sbjct: 169 QLRAENGLLXTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTXLTGYTPF 220

>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With Staurosporine At 2a Resolution Length = 345

Iteration: 1
 Score = 47.0 bits (110), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 35/129 (27%), Positives = 55/129 (42%), Gaps = 26/129 (20%)
Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           +H   +++ DLK +N+LL    +IK+ D+               M K + +     G   
Sbjct: 134 LHSKGIVYRDLKLDNILLDKDGHIKIADFG--------------MCKENML-----GDAK 174
Query: 65  YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALF--QTHENLEHL 122
                 N    T  Y APE++LG  + +  D WS G +L E+  G++ F  Q  E L H 
Sbjct: 175 -----TNXFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHS 229
Query: 123 AMMERVLGP 131
             M+    P
Sbjct: 230 IRMDNPFYP 238

>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating Kinase 1 (Ask1) With Imidazopyridine Inhibitor Length = 269

Iteration: 1
 Score = 47.0 bits (110), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 32/114 (28%), Positives = 51/114 (44%), Gaps = 31/114 (27%)
Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGST- 63
           +HD  ++H D+K +NVL+                    ++Y      S  +K+ DFG++ 
Sbjct: 124 LHDNQIVHRDIKGDNVLI--------------------NTY------SGVLKISDFGTSK 157
Query: 64  --TYERPDQNYIVSTRHYRAPEVILG--LGWTYPCDIWSVGCILVELCTGEALF 113
                 P       T  Y APE+I     G+    DIWS+GC ++E+ TG+  F
Sbjct: 158 RLAGINPCTETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPF 211

>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a Resolution. Length = 352

Iteration: 1
 Score = 47.0 bits (110), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 35/129 (27%), Positives = 55/129 (42%), Gaps = 26/129 (20%)
Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           +H   +++ DLK +N+LL    +IK+ D+               M K + +     G   
Sbjct: 135 LHSKGIVYRDLKLDNILLDKDGHIKIADFG--------------MCKENML-----GDAK 175
Query: 65  YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALF--QTHENLEHL 122
                 N    T  Y APE++LG  + +  D WS G +L E+  G++ F  Q  E L H 
Sbjct: 176 -----TNEFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHS 230
Query: 123 AMMERVLGP 131
             M+    P
Sbjct: 231 IRMDNPFYP 239

>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant Length = 334

Iteration: 1
 Score = 47.0 bits (110), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 42/153 (27%), Positives = 63/153 (41%), Gaps = 35/153 (22%)
Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG--- 61
           +H L + H DLKPEN++L+                       + +PK   IK+IDFG   
Sbjct: 130 LHSLQIAHFDLKPENIMLLD----------------------RNVPKPR-IKIIDFGLAH 166
Query: 62  STTYERPDQNYIVSTRHYRAPEVI----LGLGWTYPCDIWSVGCILVELCTGEALFQTHE 117
              +    +N I  T  + APE++    LGL      D+WS+G I   L +G + F    
Sbjct: 167 KIDFGNEFKN-IFGTPAFVAPEIVNYEPLGL----EADMWSIGVITYILLSGASPFLGDT 221
Query: 118 NLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRR 150
             E LA +  V               A+ ++RR
Sbjct: 222 KQETLANVSAVNYEFEDEYFSNTSALAKDFIRR 254

>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase 1) Length = 294

Iteration: 1
 Score = 47.0 bits (110), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 30/106 (28%), Positives = 43/106 (40%), Gaps = 24/106 (22%)
Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           +H    IH D+K  NVLL     +K+ D+  +                        G  T
Sbjct: 132 LHSERKIHRDIKAANVLLSEQGDVKLADFGVA------------------------GQLT 167
Query: 65  YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGE 110
             +  +N  V T  + APEVI    + +  DIWS+G   +EL  GE
Sbjct: 168 DTQIKRNXFVGTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKGE 213

>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp Length = 329

Iteration: 1
 Score = 46.6 bits (109), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 36/117 (30%), Positives = 49/117 (41%), Gaps = 29/117 (24%)
Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           +H+  +IH DLKPENVLL S E                        +   IK+ DFG + 
Sbjct: 136 LHENGIIHRDLKPENVLLSSQE------------------------EDCLIKITDFGHSK 171
Query: 65  Y--ERPDQNYIVSTRHYRAPEVILGL---GWTYPCDIWSVGCILVELCTGEALFQTH 116
              E      +  T  Y APEV++ +   G+    D WS+G IL    +G   F  H
Sbjct: 172 ILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEH 228

>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A Diaminopyrimidine Length = 281

Iteration: 1
 Score = 46.6 bits (109), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 33/128 (25%), Positives = 50/128 (39%), Gaps = 26/128 (20%)
Query: 6   HDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTY 65
           H   +IH D+KPEN+LL S+  +K+ D+  S H P                         
Sbjct: 126 HSKRVIHRDIKPENLLLGSAGELKIADFGWSCHAPSSR---------------------- 163
Query: 66  ERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMM 125
               +  +  T  Y  PE+I G       D+WS+G +  E   G+  F+ +   E    +
Sbjct: 164 ----RTTLSGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI 219
Query: 126 ERVLGPLP 133
            RV    P
Sbjct: 220 SRVEFTFP 227

>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With Inhibitor Pv1531 Length = 322

Iteration: 1
 Score = 46.6 bits (109), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 36/117 (30%), Positives = 49/117 (41%), Gaps = 29/117 (24%)
Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           +H+  +IH DLKPENVLL S E                        +   IK+ DFG + 
Sbjct: 130 LHENGIIHRDLKPENVLLSSQE------------------------EDCLIKITDFGHSK 165
Query: 65  Y--ERPDQNYIVSTRHYRAPEVILGL---GWTYPCDIWSVGCILVELCTGEALFQTH 116
              E      +  T  Y APEV++ +   G+    D WS+G IL    +G   F  H
Sbjct: 166 ILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEH 222

>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A Specific Inhibitor Length = 323

Iteration: 1
 Score = 46.6 bits (109), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 36/117 (30%), Positives = 49/117 (41%), Gaps = 29/117 (24%)
Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           +H+  +IH DLKPENVLL S E                        +   IK+ DFG + 
Sbjct: 130 LHENGIIHRDLKPENVLLSSQE------------------------EDCLIKITDFGHSK 165
Query: 65  Y--ERPDQNYIVSTRHYRAPEVILGL---GWTYPCDIWSVGCILVELCTGEALFQTH 116
              E      +  T  Y APEV++ +   G+    D WS+G IL    +G   F  H
Sbjct: 166 ILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEH 222

>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In Complex With Inhibitor Pv1533 Length = 322

Iteration: 1
 Score = 46.6 bits (109), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 36/117 (30%), Positives = 49/117 (41%), Gaps = 29/117 (24%)
Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           +H+  +IH DLKPENVLL S E                        +   IK+ DFG + 
Sbjct: 129 LHENGIIHRDLKPENVLLSSQE------------------------EDCLIKITDFGHSK 164
Query: 65  Y--ERPDQNYIVSTRHYRAPEVILGL---GWTYPCDIWSVGCILVELCTGEALFQTH 116
              E      +  T  Y APEV++ +   G+    D WS+G IL    +G   F  H
Sbjct: 165 ILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEH 221

>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With Inhibitor Pv976 Length = 323

Iteration: 1
 Score = 46.6 bits (109), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 36/117 (30%), Positives = 49/117 (41%), Gaps = 29/117 (24%)
Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           +H+  +IH DLKPENVLL S E                        +   IK+ DFG + 
Sbjct: 130 LHENGIIHRDLKPENVLLSSQE------------------------EDCLIKITDFGHSK 165
Query: 65  Y--ERPDQNYIVSTRHYRAPEVILGL---GWTYPCDIWSVGCILVELCTGEALFQTH 116
              E      +  T  Y APEV++ +   G+    D WS+G IL    +G   F  H
Sbjct: 166 ILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEH 222

>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp Length = 354

Iteration: 1
 Score = 46.6 bits (109), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 31/100 (31%), Positives = 47/100 (47%), Gaps = 26/100 (26%)
Query: 10  MIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD 69
           ++H D+KP N+L+ S   IK+ D+  S                   ++ID  + ++    
Sbjct: 136 IMHRDVKPSNILVNSRGEIKLCDFGVSG------------------QLIDSMANSF---- 173
Query: 70  QNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG 109
               V TR Y APE + G  ++   DIWS+G  LVEL  G
Sbjct: 174 ----VGTRSYMAPERLQGTHYSVQSDIWSMGLSLVELAVG 209

>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662 Length = 279

Iteration: 1
 Score = 46.6 bits (109), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 27/99 (27%), Positives = 42/99 (42%), Gaps = 24/99 (24%)
Query: 10  MIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD 69
           ++H DLKP NV L   + +K+ D+  +     D  + K                      
Sbjct: 137 VLHRDLKPANVFLDGKQNVKLGDFGLARILNHDEDFAKE--------------------- 175
Query: 70  QNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT 108
               V T +Y +PE +  + +    DIWS+GC+L ELC 
Sbjct: 176 ---FVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCA 211

>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage Checkpoint Kinase Length = 419

Iteration: 1
 Score = 46.2 bits (108), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 36/117 (30%), Positives = 49/117 (41%), Gaps = 29/117 (24%)
Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           +H+  +IH DLKPENVLL S E                        +   IK+ DFG + 
Sbjct: 255 LHENGIIHRDLKPENVLLSSQE------------------------EDCLIKITDFGHSK 290
Query: 65  Y--ERPDQNYIVSTRHYRAPEVILGL---GWTYPCDIWSVGCILVELCTGEALFQTH 116
              E      +  T  Y APEV++ +   G+    D WS+G IL    +G   F  H
Sbjct: 291 ILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEH 347

>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage Checkpoint Kinase Length = 443

Iteration: 1
 Score = 46.2 bits (108), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 36/117 (30%), Positives = 49/117 (41%), Gaps = 29/117 (24%)
Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           +H+  +IH DLKPENVLL S E                        +   IK+ DFG + 
Sbjct: 269 LHENGIIHRDLKPENVLLSSQE------------------------EDCLIKITDFGHSK 304
Query: 65  Y--ERPDQNYIVSTRHYRAPEVILGL---GWTYPCDIWSVGCILVELCTGEALFQTH 116
              E      +  T  Y APEV++ +   G+    D WS+G IL    +G   F  H
Sbjct: 305 ILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEH 361

>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420 Length = 504

Iteration: 1
 Score = 46.2 bits (108), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 35/125 (28%), Positives = 57/125 (45%), Gaps = 27/125 (21%)
Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           +H   ++H D+KPEN+LL +         K+SL                 IK++DFG ++
Sbjct: 162 LHKHNIVHRDIKPENILLEN---------KNSLLN---------------IKIVDFGLSS 197
Query: 65  YERPDQNY--IVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHL 122
           +   D      + T +Y APEV L   +   CD+WS G I+  L  G   F    + + +
Sbjct: 198 FFSKDYKLRDRLGTAYYIAPEV-LKKKYNEKCDVWSCGVIMYILLCGYPPFGGQNDQDII 256
Query: 123 AMMER 127
             +E+
Sbjct: 257 KKVEK 261

>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein Kinase 6 (Mapk6) Length = 320

Iteration: 1
 Score = 46.2 bits (108), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 30/128 (23%), Positives = 55/128 (42%), Gaps = 33/128 (25%)
Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           +H   ++H DLKP N+ + + + +                          +K+ DFG   
Sbjct: 136 IHSANVLHRDLKPANLFINTEDLV--------------------------LKIGDFGLAR 169
Query: 65  YERPDQNYI------VSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHE 117
              P  ++       + T+ YR+P ++L    +T   D+W+ GCI  E+ TG+ LF    
Sbjct: 170 IMDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAH 229
Query: 118 NLEHLAMM 125
            LE + ++
Sbjct: 230 ELEQMQLI 237

>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From Toxoplasma Gondii, 541.m00134, Kinase Domain Length = 287

Iteration: 1
 Score = 46.2 bits (108), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 39/126 (30%), Positives = 53/126 (42%), Gaps = 29/126 (23%)
Query: 5   MHDLCMIHTDLKPENVLLVSSE---YIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG 61
           +H   ++H DLKPEN+LL S      IK+ D+  S H                    + G
Sbjct: 137 LHKHNIVHRDLKPENLLLESKSRDALIKIVDFGLSAH-------------------FEVG 177
Query: 62  STTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEH 121
               ER      + T +Y APEV L   +   CD+WS G IL  L  G   F    + E 
Sbjct: 178 GKMKER------LGTAYYIAPEV-LRKKYDEKCDVWSCGVILYILLCGYPPFGGQTDQEI 230
Query: 122 LAMMER 127
           L  +E+
Sbjct: 231 LKRVEK 236

>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A Pentacyclic Inhibitor Length = 268

Iteration: 1
 Score = 46.2 bits (108), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 32/128 (25%), Positives = 51/128 (39%), Gaps = 26/128 (20%)
Query: 6   HDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTY 65
           H   +IH D+KPEN+LL S+  +K+ D+  S+H P                         
Sbjct: 125 HSKKVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---------------------- 162
Query: 66  ERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMM 125
               +  +  T  Y  PE+I G       D+WS+G +  E   G+  F+ +   +    +
Sbjct: 163 ----RAALCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQDTYKRI 218
Query: 126 ERVLGPLP 133
            RV    P
Sbjct: 219 SRVEFTFP 226

>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a Length = 282

Iteration: 1
 Score = 46.2 bits (108), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 32/128 (25%), Positives = 51/128 (39%), Gaps = 26/128 (20%)
Query: 6   HDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTY 65
           H   +IH D+KPEN+LL S+  +K+ ++  S+H P                         
Sbjct: 127 HSKRVIHRDIKPENLLLGSAGELKIANFGWSVHAPSSR---------------------- 164
Query: 66  ERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMM 125
               +  +  T  Y  PE+I G       D+WS+G +  E   G+  F+ +   E    +
Sbjct: 165 ----RTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI 220
Query: 126 ERVLGPLP 133
            RV    P
Sbjct: 221 SRVEFTFP 228

>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine Inhibitor Length = 272

Iteration: 1
 Score = 45.8 bits (107), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 32/128 (25%), Positives = 51/128 (39%), Gaps = 26/128 (20%)
Query: 6   HDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTY 65
           H   +IH D+KPEN+LL S+  +K+ ++  S+H P                         
Sbjct: 128 HSKRVIHRDIKPENLLLGSAGELKIANFGWSVHAPSSR---------------------- 165
Query: 66  ERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMM 125
               +  +  T  Y  PE+I G       D+WS+G +  E   G+  F+ +   E    +
Sbjct: 166 ----RTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI 221
Query: 126 ERVLGPLP 133
            RV    P
Sbjct: 222 SRVEFTFP 229

>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent Protein Kinase I 1-320 In Complex With Atp Length = 320

Iteration: 1
 Score = 45.8 bits (107), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 32/107 (29%), Positives = 45/107 (42%), Gaps = 26/107 (24%)
Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           +HDL ++H DLKPEN+L  S                        + + S I + DFG + 
Sbjct: 132 LHDLGIVHRDLKPENLLYYS------------------------LDEDSKIMISDFGLSK 167
Query: 65  YERPDQ--NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG 109
            E P    +    T  Y APEV+    ++   D WS+G I   L  G
Sbjct: 168 MEDPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCG 214

>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat Length = 332

Iteration: 1
 Score = 45.8 bits (107), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 32/107 (29%), Positives = 45/107 (42%), Gaps = 26/107 (24%)
Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           +HDL ++H DLKPEN+L  S                        + + S I + DFG + 
Sbjct: 132 LHDLGIVHRDLKPENLLYYS------------------------LDEDSKIMISDFGLSK 167
Query: 65  YERPDQ--NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG 109
            E P    +    T  Y APEV+    ++   D WS+G I   L  G
Sbjct: 168 MEDPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCG 214

>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent Protein Kinase I 1-315 In Complex With Atp Length = 315

Iteration: 1
 Score = 45.8 bits (107), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 32/107 (29%), Positives = 45/107 (42%), Gaps = 26/107 (24%)
Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           +HDL ++H DLKPEN+L  S                        + + S I + DFG + 
Sbjct: 132 LHDLGIVHRDLKPENLLYYS------------------------LDEDSKIMISDFGLSK 167
Query: 65  YERPDQ--NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG 109
            E P    +    T  Y APEV+    ++   D WS+G I   L  G
Sbjct: 168 MEDPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCG 214

>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6 Length = 321

Iteration: 1
 Score = 45.8 bits (107), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 28/109 (25%), Positives = 47/109 (43%), Gaps = 24/109 (22%)
Query: 2   FAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG 61
            A +H   +IH D+K +++LL     +K+ D+       KD                   
Sbjct: 154 LAYLHAQGVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDV------------------ 195
Query: 62  STTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGE 110
                 P +  +V T ++ APEVI    +    DIWS+G +++E+  GE
Sbjct: 196 ------PKRKXLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGE 238

>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3, Tgme49_105860 Length = 467

Iteration: 1
 Score = 45.4 bits (106), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 39/126 (30%), Positives = 53/126 (42%), Gaps = 29/126 (23%)
Query: 5   MHDLCMIHTDLKPENVLLVSSE---YIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG 61
           +H   ++H DLKPEN+LL S      IK+ D+  S H                    + G
Sbjct: 120 LHKHNIVHRDLKPENLLLESKSRDALIKIVDFGLSAH-------------------FEVG 160
Query: 62  STTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEH 121
               ER      + T +Y APEV L   +   CD+WS G IL  L  G   F    + E 
Sbjct: 161 GKMKER------LGTAYYIAPEV-LRKKYDEKCDVWSCGVILYILLCGYPPFGGQTDQEI 213
Query: 122 LAMMER 127
           L  +E+
Sbjct: 214 LKRVEK 219

>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent Protein Kinase I 1-293 In Complex With Atp Length = 293

Iteration: 1
 Score = 45.4 bits (106), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 32/107 (29%), Positives = 45/107 (42%), Gaps = 26/107 (24%)
Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           +HDL ++H DLKPEN+L  S                        + + S I + DFG + 
Sbjct: 132 LHDLGIVHRDLKPENLLYYS------------------------LDEDSKIMISDFGLSK 167
Query: 65  YERPDQ--NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG 109
            E P    +    T  Y APEV+    ++   D WS+G I   L  G
Sbjct: 168 MEDPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCG 214

>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase Length = 314

Iteration: 1
 Score = 45.4 bits (106), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 27/106 (25%), Positives = 46/106 (43%), Gaps = 24/106 (22%)
Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           +H +  IH D+K  N+LL +  + K+ D+  +                        G  T
Sbjct: 141 LHFMRKIHRDIKAGNILLNTEGHAKLADFGVA------------------------GQLT 176
Query: 65  YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGE 110
                +N ++ T  + APEVI  +G+    DIWS+G   +E+  G+
Sbjct: 177 DXMAKRNXVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGK 222

>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase Mst4 In Complex With An Quinazolin Length = 301

Iteration: 1
 Score = 45.4 bits (106), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 30/106 (28%), Positives = 42/106 (39%), Gaps = 24/106 (22%)
Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           +H    IH D+K  NVLL     +K+ D+  +                        G  T
Sbjct: 136 LHSEKKIHRDIKAANVLLSEQGDVKLADFGVA------------------------GQLT 171
Query: 65  YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGE 110
             +  +N  V T  + APEVI    +    DIWS+G   +EL  GE
Sbjct: 172 DTQIKRNTFVGTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGE 217

>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363 Length = 340

Iteration: 1
 Score = 45.4 bits (106), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 36/135 (26%), Positives = 54/135 (40%), Gaps = 31/135 (22%)
Query: 10  MIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD 69
           +++ DLK EN++L    +IK+ D+       KD +  K                      
Sbjct: 130 VVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKX--------------------- 168
Query: 70  QNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALF--QTHENLEHLAMME- 126
                 T  Y APEV+    +    D W +G ++ E+  G   F  Q HE L  L +ME 
Sbjct: 169 ---FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEE 225
Query: 127 ----RVLGPLPQHML 137
               R LGP  + +L
Sbjct: 226 IRFPRTLGPEAKSLL 240

>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN- Dependent Protein Kinase Ii Delta In Complex With Calmodulin Length = 327

Iteration: 1
 Score = 45.4 bits (106), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 31/103 (30%), Positives = 43/103 (41%), Gaps = 27/103 (26%)
Query: 10  MIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD 69
           ++H DLKPEN+LL S                          K +A+K+ DFG     + D
Sbjct: 124 IVHRDLKPENLLLASKS------------------------KGAAVKLADFGLAIEVQGD 159
Query: 70  QNY---IVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG 109
           Q        T  Y +PEV+    +  P D+W+ G IL  L  G
Sbjct: 160 QQAWFGFAGTPGYLSPEVLRKDPYGKPVDMWACGVILYILLVG 202

>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain Length = 346

Iteration: 1
 Score = 45.4 bits (106), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 28/112 (25%), Positives = 46/112 (41%), Gaps = 26/112 (23%)
Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           +H   ++H DLKP N+L                       Y         +++ DFG   
Sbjct: 137 LHSQGVVHRDLKPSNIL-----------------------YVDESGNPECLRICDFGFAK 173
Query: 65  YERPDQNYIVS---TRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALF 113
             R +   +++   T ++ APEV+   G+   CDIWS+G +L  +  G   F
Sbjct: 174 QLRAENGLLMTPCYTANFVAPEVLKRQGYDEGCDIWSLGILLYTMLAGYTPF 225

>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate Peptide And Inhibitor Length = 342

Iteration: 1
 Score = 45.4 bits (106), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 36/135 (26%), Positives = 54/135 (40%), Gaps = 31/135 (22%)
Query: 10  MIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD 69
           +++ DLK EN++L    +IK+ D+       KD +  K                      
Sbjct: 132 VVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKX--------------------- 170
Query: 70  QNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALF--QTHENLEHLAMME- 126
                 T  Y APEV+    +    D W +G ++ E+  G   F  Q HE L  L +ME 
Sbjct: 171 ---FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEE 227
Query: 127 ----RVLGPLPQHML 137
               R LGP  + +L
Sbjct: 228 IRFPRTLGPEAKSLL 242

>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor Length = 341

Iteration: 1
 Score = 45.4 bits (106), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 36/135 (26%), Positives = 54/135 (40%), Gaps = 31/135 (22%)
Query: 10  MIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD 69
           +++ DLK EN++L    +IK+ D+       KD +  K                      
Sbjct: 131 VVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKX--------------------- 169
Query: 70  QNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALF--QTHENLEHLAMME- 126
                 T  Y APEV+    +    D W +G ++ E+  G   F  Q HE L  L +ME 
Sbjct: 170 ---FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEE 226
Query: 127 ----RVLGPLPQHML 137
               R LGP  + +L
Sbjct: 227 IRFPRTLGPEAKSLL 241

>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1 Length = 327

Iteration: 1
 Score = 45.1 bits (105), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 32/117 (27%), Positives = 52/117 (44%), Gaps = 31/117 (26%)
Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDY---KSSLHTPKDSSYFKRMPKSSAIKVIDFG 61
           +H   +I+ DLKPEN++L    ++K+ D+   K S+H                      G
Sbjct: 137 LHQKGIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHD---------------------G 175
Query: 62  STTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHEN 118
           + T+          T  Y APE+++  G     D WS+G ++ ++ TG   F T EN
Sbjct: 176 TVTH------XFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPF-TGEN 225

>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent Protein Kinase Ii Delta Isoform 1, Camkd Length = 301

Iteration: 1
 Score = 45.1 bits (105), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 31/103 (30%), Positives = 43/103 (41%), Gaps = 27/103 (26%)
Query: 10  MIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD 69
           ++H DLKPEN+LL S                          K +A+K+ DFG     + D
Sbjct: 124 IVHRDLKPENLLLASKS------------------------KGAAVKLADFGLAIEVQGD 159
Query: 70  QNY---IVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG 109
           Q        T  Y +PEV+    +  P D+W+ G IL  L  G
Sbjct: 160 QQAWFGFAGTPGYLSPEVLRKDPYGKPVDMWACGVILYILLVG 202

>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin E804 Length = 313

Iteration: 1
 Score = 45.1 bits (105), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 32/107 (29%), Positives = 46/107 (42%), Gaps = 27/107 (25%)
Query: 6   HDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG-STT 64
           H + ++H DLKPEN+LL S                          K +A+K+ DFG +  
Sbjct: 138 HQMGVVHRDLKPENLLLASK------------------------LKGAAVKLADFGLAIE 173
Query: 65  YERPDQNY--IVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG 109
            E   Q +     T  Y +PEV+    +  P D+W+ G IL  L  G
Sbjct: 174 VEGEQQAWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVG 220

>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1 Length = 415

Iteration: 1
 Score = 45.1 bits (105), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 35/121 (28%), Positives = 54/121 (44%), Gaps = 28/121 (23%)
Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           +H L  +H D+KP+NVLL  + +I++ D+ S L    D +      +SS           
Sbjct: 191 IHQLHYVHRDIKPDNVLLDVNGHIRLADFGSCLKMNDDGTV-----QSSV---------- 235
Query: 65  YERPDQNYIVSTRHYRAPEVIL----GLGWTYP-CDIWSVGCILVELCTGEALFQTHENL 119
                    V T  Y +PE++     G+G   P CD WS+G  + E+  GE  F     +
Sbjct: 236 --------AVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLV 287
Query: 120 E 120
           E
Sbjct: 288 E 288

>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil Length = 433

Iteration: 1
 Score = 45.1 bits (105), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 34/114 (29%), Positives = 52/114 (45%), Gaps = 28/114 (24%)
Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           +H L  +H D+KP+NVLL  + +I++ D+ S L    D +      +SS           
Sbjct: 207 IHQLHYVHRDIKPDNVLLDVNGHIRLADFGSCLKMNDDGTV-----QSSV---------- 251
Query: 65  YERPDQNYIVSTRHYRAPEVIL----GLGWTYP-CDIWSVGCILVELCTGEALF 113
                    V T  Y +PE++     G+G   P CD WS+G  + E+  GE  F
Sbjct: 252 --------AVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPF 297

>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I) Length = 327

Iteration: 1
 Score = 45.1 bits (105), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 32/117 (27%), Positives = 52/117 (44%), Gaps = 31/117 (26%)
Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDY---KSSLHTPKDSSYFKRMPKSSAIKVIDFG 61
           +H   +I+ DLKPEN++L    ++K+ D+   K S+H                      G
Sbjct: 137 LHQKGIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHD---------------------G 175
Query: 62  STTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHEN 118
           + T+          T  Y APE+++  G     D WS+G ++ ++ TG   F T EN
Sbjct: 176 TVTHT------FCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPF-TGEN 225

>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase Length = 330

Iteration: 1
 Score = 45.1 bits (105), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 28/112 (25%), Positives = 46/112 (41%), Gaps = 26/112 (23%)
Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           +H   ++H DLKP N+L                       Y         +++ DFG   
Sbjct: 137 LHSQGVVHRDLKPSNIL-----------------------YVDESGNPECLRICDFGFAK 173
Query: 65  YERPDQNYIVS---TRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALF 113
             R +   +++   T ++ APEV+   G+   CDIWS+G +L  +  G   F
Sbjct: 174 QLRAENGLLMTPCYTANFVAPEVLKRQGYDEGCDIWSLGILLYTMLAGYTPF 225

>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical Protein Kinase C-Iota Length = 364

Iteration: 1
 Score = 45.1 bits (105), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 32/112 (28%), Positives = 50/112 (44%), Gaps = 30/112 (26%)
Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDY---KSSLHTPKDSSYFKRMPKSSAIKVIDFG 61
           +H+  +I+ DLK +NVLL S  +IK+ DY   K  L     +S F   P           
Sbjct: 137 LHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSXFCGTP----------- 185
Query: 62  STTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALF 113
                    NYI       APE++ G  + +  D W++G ++ E+  G + F
Sbjct: 186 ---------NYI-------APEILRGEDYGFSVDWWALGVLMFEMMAGRSPF 221

>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase Catalytic Subunit From Saccharomyces Cerevisiae Length = 318

Iteration: 1
 Score = 45.1 bits (105), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 33/110 (30%), Positives = 45/110 (40%), Gaps = 29/110 (26%)
Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           +H   +I+ DLKPEN+LL                            K+  IK+ DFG   
Sbjct: 122 LHSKDIIYRDLKPENILL---------------------------DKNGHIKITDFGFAK 154
Query: 65  YERPDQNY-IVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALF 113
           Y  PD  Y +  T  Y APEV+    +    D WS G ++ E+  G   F
Sbjct: 155 Y-VPDVTYXLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPF 203

>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex With N-(4- (5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h- Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide Length = 446

Iteration: 1
 Score = 45.1 bits (105), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 36/135 (26%), Positives = 54/135 (40%), Gaps = 31/135 (22%)
Query: 10  MIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD 69
           +++ DLK EN++L    +IK+ D+       KD +  K                      
Sbjct: 270 VVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKT--------------------- 308
Query: 70  QNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALF--QTHENLEHLAMME- 126
                 T  Y APEV+    +    D W +G ++ E+  G   F  Q HE L  L +ME 
Sbjct: 309 ---FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEE 365
Query: 127 ----RVLGPLPQHML 137
               R LGP  + +L
Sbjct: 366 IRFPRTLGPEAKSLL 380

>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric Inhibitor Length = 446

Iteration: 1
 Score = 45.1 bits (105), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 36/135 (26%), Positives = 54/135 (40%), Gaps = 31/135 (22%)
Query: 10  MIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD 69
           +++ DLK EN++L    +IK+ D+       KD +  K                      
Sbjct: 273 VVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKT--------------------- 311
Query: 70  QNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALF--QTHENLEHLAMME- 126
                 T  Y APEV+    +    D W +G ++ E+  G   F  Q HE L  L +ME 
Sbjct: 312 ---FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEE 368
Query: 127 ----RVLGPLPQHML 137
               R LGP  + +L
Sbjct: 369 IRFPRTLGPEAKSLL 383

>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From Par-3 Length = 396

Iteration: 1
 Score = 44.7 bits (104), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 32/112 (28%), Positives = 50/112 (44%), Gaps = 30/112 (26%)
Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDY---KSSLHTPKDSSYFKRMPKSSAIKVIDFG 61
           +H+  +I+ DLK +NVLL S  +IK+ DY   K  L     +S F   P           
Sbjct: 169 LHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSTFCGTP----------- 217
Query: 62  STTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALF 113
                    NYI       APE++ G  + +  D W++G ++ E+  G + F
Sbjct: 218 ---------NYI-------APEILRGEDYGFSVDWWALGVLMFEMMAGRSPF 253

>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor Length = 349

Iteration: 1
 Score = 44.7 bits (104), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 32/112 (28%), Positives = 50/112 (44%), Gaps = 30/112 (26%)
Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDY---KSSLHTPKDSSYFKRMPKSSAIKVIDFG 61
           +H+  +I+ DLK +NVLL S  +IK+ DY   K  L     +S F   P           
Sbjct: 122 LHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSXFCGTP----------- 170
Query: 62  STTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALF 113
                    NYI       APE++ G  + +  D W++G ++ E+  G + F
Sbjct: 171 ---------NYI-------APEILRGEDYGFSVDWWALGVLMFEMMAGRSPF 206

>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In A Ternary Complex With Compound 1, Atp-Gs And Mg2p Length = 360

Iteration: 1
 Score = 44.7 bits (104), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 29/100 (29%), Positives = 47/100 (47%), Gaps = 26/100 (26%)
Query: 10  MIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD 69
           ++H D+KP N+L+ S   IK+ D+  S                   ++ID  + ++    
Sbjct: 153 IMHRDVKPSNILVNSRGEIKLCDFGVSG------------------QLIDSMANSF---- 190
Query: 70  QNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG 109
               V TR Y +PE + G  ++   DIWS+G  LVE+  G
Sbjct: 191 ----VGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVG 226

>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain Length = 345

Iteration: 1
 Score = 44.7 bits (104), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 32/112 (28%), Positives = 50/112 (44%), Gaps = 30/112 (26%)
Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDY---KSSLHTPKDSSYFKRMPKSSAIKVIDFG 61
           +H+  +I+ DLK +NVLL S  +IK+ DY   K  L     +S F   P           
Sbjct: 126 LHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSXFCGTP----------- 174
Query: 62  STTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALF 113
                    NYI       APE++ G  + +  D W++G ++ E+  G + F
Sbjct: 175 ---------NYI-------APEILRGEDYGFSVDWWALGVLMFEMMAGRSPF 210

>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With Ucb1353770 And Amppnp Length = 304

Iteration: 1
 Score = 44.7 bits (104), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 29/100 (29%), Positives = 47/100 (47%), Gaps = 26/100 (26%)
Query: 10  MIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD 69
           ++H D+KP N+L+ S   IK+ D+  S                   ++ID  + ++    
Sbjct: 145 IMHRDVKPSNILVNSRGEIKLCDFGVSG------------------QLIDSMANSF---- 182
Query: 70  QNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG 109
               V TR Y +PE + G  ++   DIWS+G  LVE+  G
Sbjct: 183 ----VGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVG 218

>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2 Chain) Length = 276

Iteration: 1
 Score = 44.7 bits (104), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 35/108 (32%), Positives = 46/108 (42%), Gaps = 24/108 (22%)
Query: 6   HDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTY 65
           H   ++H DLKPENVLL +    K+ D+  S +   D  + +             GS  Y
Sbjct: 128 HRHMVVHRDLKPENVLLDAHMNAKIADFGLS-NMMSDGEFLR----------TSCGSPNY 176
Query: 66  ERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALF 113
             P+   ++S R Y  PEV          DIWS G IL  L  G   F
Sbjct: 177 AAPE---VISGRLYAGPEV----------DIWSCGVILYALLCGTLPF 211

>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer Length = 395

Iteration: 1
 Score = 44.7 bits (104), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 29/100 (29%), Positives = 47/100 (47%), Gaps = 26/100 (26%)
Query: 10  MIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD 69
           ++H D+KP N+L+ S   IK+ D+  S                   ++ID  + ++    
Sbjct: 188 IMHRDVKPSNILVNSRGEIKLCDFGVSG------------------QLIDSMANSF---- 225
Query: 70  QNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG 109
               V TR Y +PE + G  ++   DIWS+G  LVE+  G
Sbjct: 226 ----VGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVG 261

>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7 Length = 310

Iteration: 1
 Score = 44.7 bits (104), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 29/109 (26%), Positives = 48/109 (44%), Gaps = 24/109 (22%)
Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           MH   ++H D+KP NV + ++  +K+ D                           F S T
Sbjct: 152 MHSRRVMHRDIKPANVFITATGVVKLGDLGLGRF---------------------FSSKT 190
Query: 65  YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALF 113
                 + +V T +Y +PE I   G+ +  DIWS+GC+L E+   ++ F
Sbjct: 191 TA---AHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPF 236

>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of CalciumCALMODULIN ACTIVATED KINASE II Length = 362

Iteration: 1
 Score = 44.3 bits (103), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 31/110 (28%), Positives = 45/110 (40%), Gaps = 26/110 (23%)
Query: 2   FAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG 61
            A  H   ++H +LKPEN+LL S                          K +A+K+ DFG
Sbjct: 141 IAYCHSNGIVHRNLKPENLLLASK------------------------AKGAAVKLADFG 176
Query: 62  STTYERPDQNY--IVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG 109
                   + +     T  Y +PEV+    ++ P DIW+ G IL  L  G
Sbjct: 177 LAIEVNDSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVG 226

>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent Protein Kinase Ii Gamma Length = 336

Iteration: 1
 Score = 44.3 bits (103), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 32/108 (29%), Positives = 45/108 (41%), Gaps = 27/108 (25%)
Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           +H   ++H DLKPEN+LL S                          K +A+K+ DFG   
Sbjct: 146 IHQHDIVHRDLKPENLLLASK------------------------CKGAAVKLADFGLAI 181
Query: 65  YERPDQNY---IVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG 109
             + +Q        T  Y +PEV+    +  P DIW+ G IL  L  G
Sbjct: 182 EVQGEQQAWFGFAGTPGYLSPEVLRKDPYGKPVDIWACGVILYILLVG 229

>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human 5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant (T172d) Length = 276

Iteration: 1
 Score = 44.3 bits (103), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 35/108 (32%), Positives = 46/108 (42%), Gaps = 24/108 (22%)
Query: 6   HDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTY 65
           H   ++H DLKPENVLL +    K+ D+  S +   D  + +             GS  Y
Sbjct: 128 HRHMVVHRDLKPENVLLDAHMNAKIADFGLS-NMMSDGEFLRD----------SCGSPNY 176
Query: 66  ERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALF 113
             P+   ++S R Y  PEV          DIWS G IL  L  G   F
Sbjct: 177 AAPE---VISGRLYAGPEV----------DIWSCGVILYALLCGTLPF 211

>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain Length = 402

Iteration: 1
 Score = 44.3 bits (103), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 29/114 (25%), Positives = 51/114 (44%), Gaps = 27/114 (23%)
Query: 4   VMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGST 63
            +H + +IH D+KP+N+LL    ++K+ D+ + +          +M ++  +        
Sbjct: 189 AIHSMGLIHRDVKPDNMLLDKHGHLKLADFGTCM----------KMDETGMVHC------ 232
Query: 64  TYERPDQNYIVSTRHYRAPEVILGLG----WTYPCDIWSVGCILVELCTGEALF 113
                  +  V T  Y +PEV+   G    +   CD WSVG  L E+  G+  F
Sbjct: 233 -------DTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPF 279

>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits Length = 689

Iteration: 1
 Score = 44.3 bits (103), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 30/115 (26%), Positives = 53/115 (46%), Gaps = 27/115 (23%)
Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           MH+  +++ DLKP N+LL    ++++ D   +        + K+ P +S           
Sbjct: 308 MHNRFVVYRDLKPANILLDEHGHVRISDLGLA------CDFSKKKPHAS----------- 350
Query: 65  YERPDQNYIVSTRHYRAPEVIL-GLGWTYPCDIWSVGCILVELCTGEALFQTHEN 118
                    V T  Y APEV+  G+ +    D +S+GC+L +L  G + F+ H+ 
Sbjct: 351 ---------VGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKT 396

>pdb|3A7F|A Chain A, Human Mst3 Kinase Length = 303

Iteration: 1
 Score = 44.3 bits (103), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 30/106 (28%), Positives = 42/106 (39%), Gaps = 24/106 (22%)
Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           +H    IH D+K  NVLL     +K+ D+  +                        G  T
Sbjct: 135 LHSEKKIHRDIKAANVLLSEHGEVKLADFGVA------------------------GQLT 170
Query: 65  YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGE 110
             +  +N  V T  + APEVI    +    DIWS+G   +EL  GE
Sbjct: 171 DTQIKRNXFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGE 216

>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In A Complex With Ligand And Mgatp Length = 341

Iteration: 1
 Score = 43.9 bits (102), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 29/100 (29%), Positives = 47/100 (47%), Gaps = 26/100 (26%)
Query: 10  MIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD 69
           ++H D+KP N+L+ S   IK+ D+  S                   ++ID  + ++    
Sbjct: 126 IMHRDVKPSNILVNSRGEIKLCDFGVSG------------------QLIDSMANSF---- 163
Query: 70  QNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG 109
               V TR Y +PE + G  ++   DIWS+G  LVE+  G
Sbjct: 164 ----VGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVG 199

>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol (Soak) Length = 688

Iteration: 1
 Score = 43.9 bits (102), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 30/115 (26%), Positives = 53/115 (46%), Gaps = 27/115 (23%)
Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           MH+  +++ DLKP N+LL    ++++ D   +        + K+ P +S           
Sbjct: 307 MHNRFVVYRDLKPANILLDEHGHVRISDLGLA------CDFSKKKPHAS----------- 349
Query: 65  YERPDQNYIVSTRHYRAPEVIL-GLGWTYPCDIWSVGCILVELCTGEALFQTHEN 118
                    V T  Y APEV+  G+ +    D +S+GC+L +L  G + F+ H+ 
Sbjct: 350 ---------VGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKT 395

>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At Thr265 Length = 278

Iteration: 1
 Score = 43.9 bits (102), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 40/152 (26%), Positives = 61/152 (40%), Gaps = 33/152 (21%)
Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           +H   + H DLKPEN++L+      VP+       P+             IK+IDFG   
Sbjct: 131 LHSKRIAHFDLKPENIMLLDK---NVPN-------PR-------------IKLIDFGIAH 167
Query: 65  YERPDQNY--IVSTRHYRAPEVI----LGLGWTYPCDIWSVGCILVELCTGEALFQTHEN 118
                  +  I  T  + APE++    LGL      D+WS+G I   L +G + F     
Sbjct: 168 KIEAGNEFKNIFGTPEFVAPEIVNYEPLGL----EADMWSIGVITYILLSGASPFLGETK 223
Query: 119 LEHLAMMERVLGPLPQHMLKRVDRHAEKYVRR 150
            E L  +  V     +         A+ ++RR
Sbjct: 224 QETLTNISAVNYDFDEEYFSNTSELAKDFIRR 255

>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3, Stk24) In Complex With Staurosporine Length = 304

Iteration: 1
 Score = 43.9 bits (102), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 30/106 (28%), Positives = 42/106 (39%), Gaps = 24/106 (22%)
Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           +H    IH D+K  NVLL     +K+ D+  +                        G  T
Sbjct: 120 LHSEKKIHRDIKAANVLLSEHGEVKLADFGVA------------------------GQLT 155
Query: 65  YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGE 110
             +  +N  V T  + APEVI    +    DIWS+G   +EL  GE
Sbjct: 156 DTQIKRNXFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGE 201

>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A Tetracyclic Pyridone Inhibitor (pyridone 6) Length = 304

Iteration: 1
 Score = 43.9 bits (102), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 40/152 (26%), Positives = 61/152 (40%), Gaps = 33/152 (21%)
Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           +H   + H DLKPEN++L+      VP+       P+             IK+IDFG   
Sbjct: 145 LHSKRIAHFDLKPENIMLLDK---NVPN-------PR-------------IKLIDFGIAH 181
Query: 65  YERPDQNY--IVSTRHYRAPEVI----LGLGWTYPCDIWSVGCILVELCTGEALFQTHEN 118
                  +  I  T  + APE++    LGL      D+WS+G I   L +G + F     
Sbjct: 182 KIEAGNEFKNIFGTPEFVAPEIVNYEPLGL----EADMWSIGVITYILLSGASPFLGETK 237
Query: 119 LEHLAMMERVLGPLPQHMLKRVDRHAEKYVRR 150
            E L  +  V     +         A+ ++RR
Sbjct: 238 QETLTNISAVNYDFDEEYFSNTSELAKDFIRR 269

>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp Length = 328

Iteration: 1
 Score = 43.9 bits (102), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 29/100 (29%), Positives = 47/100 (47%), Gaps = 26/100 (26%)
Query: 10  MIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD 69
           ++H D+KP N+L+ S   IK+ D+  S                   ++ID  + ++    
Sbjct: 126 IMHRDVKPSNILVNSRGEIKLCDFGVSG------------------QLIDSMANSF---- 163
Query: 70  QNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG 109
               V TR Y +PE + G  ++   DIWS+G  LVE+  G
Sbjct: 164 ----VGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVG 199

>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound Length = 322

Iteration: 1
 Score = 43.9 bits (102), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 29/100 (29%), Positives = 47/100 (47%), Gaps = 26/100 (26%)
Query: 10  MIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD 69
           ++H D+KP N+L+ S   IK+ D+  S                   ++ID  + ++    
Sbjct: 126 IMHRDVKPSNILVNSRGEIKLCDFGVSG------------------QLIDSMANSF---- 163
Query: 70  QNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG 109
               V TR Y +PE + G  ++   DIWS+G  LVE+  G
Sbjct: 164 ----VGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVG 199

>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In A Complex With Ligand And Mgatp Length = 333

Iteration: 1
 Score = 43.9 bits (102), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 29/100 (29%), Positives = 47/100 (47%), Gaps = 26/100 (26%)
Query: 10  MIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD 69
           ++H D+KP N+L+ S   IK+ D+  S                   ++ID  + ++    
Sbjct: 126 IMHRDVKPSNILVNSRGEIKLCDFGVSG------------------QLIDSMANSF---- 163
Query: 70  QNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG 109
               V TR Y +PE + G  ++   DIWS+G  LVE+  G
Sbjct: 164 ----VGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVG 199

>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled Receptor Kinase 2 And Heterotrimeric G Protein Beta 1 And Gamma 2 Subunits Length = 689

Iteration: 1
 Score = 43.9 bits (102), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 30/115 (26%), Positives = 53/115 (46%), Gaps = 27/115 (23%)
Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           MH+  +++ DLKP N+LL    ++++ D   +        + K+ P +S           
Sbjct: 308 MHNRFVVYRDLKPANILLDEHGHVRISDLGLA------CDFSKKKPHAS----------- 350
Query: 65  YERPDQNYIVSTRHYRAPEVIL-GLGWTYPCDIWSVGCILVELCTGEALFQTHEN 118
                    V T  Y APEV+  G+ +    D +S+GC+L +L  G + F+ H+ 
Sbjct: 351 ---------VGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKT 396

>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits Length = 695

Iteration: 1
 Score = 43.9 bits (102), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 30/115 (26%), Positives = 53/115 (46%), Gaps = 27/115 (23%)
Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           MH+  +++ DLKP N+LL    ++++ D   +        + K+ P +S           
Sbjct: 308 MHNRFVVYRDLKPANILLDEHGHVRISDLGLA------CDFSKKKPHAS----------- 350
Query: 65  YERPDQNYIVSTRHYRAPEVIL-GLGWTYPCDIWSVGCILVELCTGEALFQTHEN 118
                    V T  Y APEV+  G+ +    D +S+GC+L +L  G + F+ H+ 
Sbjct: 351 ---------VGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKT 396

>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In Complex With Ch4987655 And Mgamp-Pnp Length = 307

Iteration: 1
 Score = 43.9 bits (102), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 29/100 (29%), Positives = 47/100 (47%), Gaps = 26/100 (26%)
Query: 10  MIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD 69
           ++H D+KP N+L+ S   IK+ D+  S                   ++ID  + ++    
Sbjct: 126 IMHRDVKPSNILVNSRGEIKLCDFGVSG------------------QLIDSMANSF---- 163
Query: 70  QNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG 109
               V TR Y +PE + G  ++   DIWS+G  LVE+  G
Sbjct: 164 ----VGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVG 199

>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex Length = 269

Iteration: 1
 Score = 43.9 bits (102), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 31/110 (28%), Positives = 45/110 (40%), Gaps = 26/110 (23%)
Query: 2   FAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG 61
            A  H   ++H +LKPEN+LL S                          K +A+K+ DFG
Sbjct: 118 IAYCHSNGIVHRNLKPENLLLASK------------------------AKGAAVKLADFG 153
Query: 62  STTYERPDQNY--IVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG 109
                   + +     T  Y +PEV+    ++ P DIW+ G IL  L  G
Sbjct: 154 LAIEVNDSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVG 203

>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3, Stk24) Length = 304

Iteration: 1
 Score = 43.9 bits (102), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 30/106 (28%), Positives = 42/106 (39%), Gaps = 24/106 (22%)
Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           +H    IH D+K  NVLL     +K+ D+  +                        G  T
Sbjct: 120 LHSEKKIHRDIKAANVLLSEHGEVKLADFGVA------------------------GQLT 155
Query: 65  YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGE 110
             +  +N  V T  + APEVI    +    DIWS+G   +EL  GE
Sbjct: 156 DTQIKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGE 201

>pdb|3KK9|A Chain A, Camkii Substrate Complex B Length = 282

Iteration: 1
 Score = 43.9 bits (102), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 31/110 (28%), Positives = 45/110 (40%), Gaps = 26/110 (23%)
Query: 2   FAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG 61
            A  H   ++H +LKPEN+LL S                          K +A+K+ DFG
Sbjct: 117 IAYCHSNGIVHRNLKPENLLLASK------------------------AKGAAVKLADFG 152
Query: 62  STTYERPDQNY--IVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG 109
                   + +     T  Y +PEV+    ++ P DIW+ G IL  L  G
Sbjct: 153 LAIEVNDSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVG 202

>pdb|3KK8|A Chain A, Camkii Substrate Complex A Length = 284

Iteration: 1
 Score = 43.9 bits (102), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 31/110 (28%), Positives = 45/110 (40%), Gaps = 26/110 (23%)
Query: 2   FAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG 61
            A  H   ++H +LKPEN+LL S                          K +A+K+ DFG
Sbjct: 118 IAYCHSNGIVHRNLKPENLLLASK------------------------AKGAAVKLADFG 153
Query: 62  STTYERPDQNY--IVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG 109
                   + +     T  Y +PEV+    ++ P DIW+ G IL  L  G
Sbjct: 154 LAIEVNDSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVG 203

>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase 3 (Dapk3) In Complex With A Beta-Carboline Ligand Length = 283

Iteration: 1
 Score = 43.9 bits (102), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 40/152 (26%), Positives = 61/152 (40%), Gaps = 33/152 (21%)
Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           +H   + H DLKPEN++L+      VP+       P+             IK+IDFG   
Sbjct: 124 LHSKRIAHFDLKPENIMLLDK---NVPN-------PR-------------IKLIDFGIAH 160
Query: 65  YERPDQNY--IVSTRHYRAPEVI----LGLGWTYPCDIWSVGCILVELCTGEALFQTHEN 118
                  +  I  T  + APE++    LGL      D+WS+G I   L +G + F     
Sbjct: 161 KIEAGNEFKNIFGTPEFVAPEIVNYEPLGL----EADMWSIGVITYILLSGASPFLGETK 216
Query: 119 LEHLAMMERVLGPLPQHMLKRVDRHAEKYVRR 150
            E L  +  V     +         A+ ++RR
Sbjct: 217 QETLTNISAVNYDFDEEYFSNTSELAKDFIRR 248

>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40 Length = 321

Iteration: 1
 Score = 43.9 bits (102), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 41/153 (26%), Positives = 63/153 (41%), Gaps = 35/153 (22%)
Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           +H   + H DLKPEN++L+    I +P                       IK+IDFG   
Sbjct: 131 LHTKKIAHFDLKPENIMLLDKN-IPIPH----------------------IKLIDFG-LA 166
Query: 65  YERPDQ---NYIVSTRHYRAPEVI----LGLGWTYPCDIWSVGCILVELCTGEALFQTHE 117
           +E  D      I  T  + APE++    LGL      D+WS+G I   L +G + F    
Sbjct: 167 HEIEDGVEFKNIFGTPEFVAPEIVNYEPLGL----EADMWSIGVITYILLSGASPFLGDT 222
Query: 118 NLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRR 150
             E LA +  V     +    +    A+ ++R+
Sbjct: 223 KQETLANITAVSYDFDEEFFSQTSELAKDFIRK 255

>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta Length = 294

Iteration: 1
 Score = 43.5 bits (101), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 30/106 (28%), Positives = 42/106 (39%), Gaps = 24/106 (22%)
Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           +H    IH D+K  NVLL     +K+ D+  +                        G  T
Sbjct: 140 LHSEKKIHRDIKAANVLLSEHGEVKLADFGVA------------------------GQLT 175
Query: 65  YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGE 110
             +  +N  V T  + APEVI    +    DIWS+G   +EL  GE
Sbjct: 176 DTQIKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGE 221

>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein Kinase I G Length = 304

Iteration: 1
 Score = 43.5 bits (101), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 33/109 (30%), Positives = 49/109 (44%), Gaps = 31/109 (28%)
Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           +H+  ++H DLKPEN+L ++ E                        ++S I + DFG + 
Sbjct: 122 LHENGIVHRDLKPENLLYLTPE------------------------ENSKIMITDFGLSK 157
Query: 65  YERPDQNYIVSTR----HYRAPEVILGLGWTYPCDIWSVGCILVELCTG 109
            E   QN I+ST      Y APEV+    ++   D WS+G I   L  G
Sbjct: 158 ME---QNGIMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCG 203

>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form With 8 Monomers In The Asymmetric Unit Length = 321

Iteration: 1
 Score = 43.5 bits (101), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 41/153 (26%), Positives = 63/153 (41%), Gaps = 35/153 (22%)
Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           +H   + H DLKPEN++L+    I +P                       IK+IDFG   
Sbjct: 131 LHTKKIAHFDLKPENIMLLDKN-IPIPH----------------------IKLIDFG-LA 166
Query: 65  YERPDQ---NYIVSTRHYRAPEVI----LGLGWTYPCDIWSVGCILVELCTGEALFQTHE 117
           +E  D      I  T  + APE++    LGL      D+WS+G I   L +G + F    
Sbjct: 167 HEIEDGVEFKNIFGTPEFVAPEIVNYEPLGL----EADMWSIGVITYILLSGASPFLGDT 222
Query: 118 NLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRR 150
             E LA +  V     +    +    A+ ++R+
Sbjct: 223 KQETLANITAVSYDFDEEFFSQTSELAKDFIRK 255

>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based Allosteric Inhibitor Xl518 (Gdc-0973), Or Related Analogs. Length = 301

Iteration: 1
 Score = 43.5 bits (101), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 28/100 (28%), Positives = 43/100 (43%), Gaps = 26/100 (26%)
Query: 10  MIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD 69
           ++H D+KP N+L+ S   IK+ D+  S     + +                         
Sbjct: 129 IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDEMA------------------------- 163
Query: 70  QNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG 109
            N  V TR Y +PE + G  ++   DIWS+G  LVE+  G
Sbjct: 164 -NEFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVG 202

>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed With Compound 16 Length = 271

Iteration: 1
 Score = 43.5 bits (101), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 35/128 (27%), Positives = 57/128 (44%), Gaps = 22/128 (17%)
Query: 10  MIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG-STTYERP 68
           +IH DLK  N+L++     KV +   S               +  +K+ DFG +  + R 
Sbjct: 129 IIHRDLKSSNILILQ----KVENGDLS---------------NKILKITDFGLAREWHRT 169
Query: 69  DQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENL--EHLAMME 126
            +        + APEVI    ++   D+WS G +L EL TGE  F+  + L   +   M 
Sbjct: 170 TKMSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGIDGLAVAYGVAMN 229
Query: 127 RVLGPLPQ 134
           ++  P+P 
Sbjct: 230 KLALPIPS 237

>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2 Length = 361

Iteration: 1
 Score = 43.5 bits (101), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 41/153 (26%), Positives = 63/153 (41%), Gaps = 35/153 (22%)
Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           +H   + H DLKPEN++L+    I +P                       IK+IDFG   
Sbjct: 131 LHTKKIAHFDLKPENIMLLDKN-IPIPH----------------------IKLIDFG-LA 166
Query: 65  YERPDQ---NYIVSTRHYRAPEVI----LGLGWTYPCDIWSVGCILVELCTGEALFQTHE 117
           +E  D      I  T  + APE++    LGL      D+WS+G I   L +G + F    
Sbjct: 167 HEIEDGVEFKNIFGTPEFVAPEIVNYEPLGL----EADMWSIGVITYILLSGASPFLGDT 222
Query: 118 NLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRR 150
             E LA +  V     +    +    A+ ++R+
Sbjct: 223 KQETLANITAVSYDFDEEFFSQTSELAKDFIRK 255

>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium Complex Lambda-Fl172 Length = 297

Iteration: 1
 Score = 43.5 bits (101), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 28/109 (25%), Positives = 48/109 (44%), Gaps = 30/109 (27%)
Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG--- 61
           +H   +IH D+K +N+LL                               ++K+ DFG   
Sbjct: 132 LHSNQVIHRDIKSDNILL---------------------------GMDGSVKLTDFGFCA 164
Query: 62  STTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGE 110
             T E+  ++ +V T ++ APEV+    +    DIWS+G + +E+  GE
Sbjct: 165 QITPEQSKRSXMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGE 213

>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain Length = 306

Iteration: 1
 Score = 43.5 bits (101), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 28/109 (25%), Positives = 48/109 (44%), Gaps = 30/109 (27%)
Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG--- 61
           +H   +IH D+K +N+LL                               ++K+ DFG   
Sbjct: 133 LHSNQVIHRDIKSDNILL---------------------------GMDGSVKLTDFGFCA 165
Query: 62  STTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGE 110
             T E+  ++ +V T ++ APEV+    +    DIWS+G + +E+  GE
Sbjct: 166 QITPEQSKRSXMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGE 214

>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk Length = 476

Iteration: 1
 Score = 43.1 bits (100), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 35/108 (32%), Positives = 46/108 (42%), Gaps = 24/108 (22%)
Query: 6   HDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTY 65
           H   ++H DLKPENVLL +    K+ D+  S +   D  + +             GS  Y
Sbjct: 133 HRHMVVHRDLKPENVLLDAHMNAKIADFGLS-NMMSDGEFLRX----------SCGSPNY 181
Query: 66  ERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALF 113
             P+   ++S R Y  PEV          DIWS G IL  L  G   F
Sbjct: 182 AAPE---VISGRLYAGPEV----------DIWSSGVILYALLCGTLPF 216

>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1 Length = 297

Iteration: 1
 Score = 43.1 bits (100), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 30/124 (24%), Positives = 53/124 (42%), Gaps = 30/124 (24%)
Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG--- 61
           +H   +IH D+K +N+LL                               ++K+ DFG   
Sbjct: 132 LHSNQVIHRDIKSDNILL---------------------------GMDGSVKLTDFGFCA 164
Query: 62  STTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEH 121
             T E+  ++ +V T ++ APEV+    +    DIWS+G + +E+  GE  +     L  
Sbjct: 165 QITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRA 224
Query: 122 LAMM 125
           L ++
Sbjct: 225 LYLI 228

>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1 Kinase Length = 288

Iteration: 1
 Score = 43.1 bits (100), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 41/153 (26%), Positives = 62/153 (40%), Gaps = 35/153 (22%)
Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           +H   + H DLKPEN++L+    I +P                       IK+IDFG   
Sbjct: 131 LHTKKIAHFDLKPENIMLLDKN-IPIPH----------------------IKLIDFG-LA 166
Query: 65  YERPDQ---NYIVSTRHYRAPEVI----LGLGWTYPCDIWSVGCILVELCTGEALFQTHE 117
           +E  D      I  T  + APE++    LGL      D+WS+G I   L +G + F    
Sbjct: 167 HEIEDGVEFKNIFGTPEFVAPEIVNYEPLGL----EADMWSIGVITYILLSGASPFLGDT 222
Query: 118 NLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRR 150
             E LA +  V     +         A+ ++R+
Sbjct: 223 KQETLANITSVSYDFDEEFFSHTSELAKDFIRK 255

>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX Length = 361

Iteration: 1
 Score = 43.1 bits (100), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 33/104 (31%), Positives = 45/104 (43%), Gaps = 21/104 (20%)
Query: 6   HDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTY 65
           HD  +IH D+KP  VLL S E               +S+  K      AI++ + G    
Sbjct: 149 HDNNIIHRDVKPHCVLLASKE---------------NSAPVKLGGFGVAIQLGESGLVAG 193
Query: 66  ERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG 109
            R      V T H+ APEV+    +  P D+W  G IL  L +G
Sbjct: 194 GR------VGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSG 231

>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B (STK17B) Length = 327

Iteration: 1
 Score = 43.1 bits (100), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 39/161 (24%), Positives = 67/161 (41%), Gaps = 26/161 (16%)
Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGST- 63
           +H   ++H DLKP+N+LL            SS++   D            IK++DFG + 
Sbjct: 147 LHQNNIVHLDLKPQNILL------------SSIYPLGD------------IKIVDFGMSR 182
Query: 64  -TYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHL 122
                 +   I+ T  Y APE++     T   D+W++G I   L T  + F   +N E  
Sbjct: 183 KIGHACELREIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPFVGEDNQETY 242
Query: 123 AMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRE 163
             + +V     +     V + A  +++   +  PE   + E
Sbjct: 243 LNISQVNVDYSEETFSSVSQLATDFIQSLLVKNPEKRPTAE 283

>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point Mutations (K299r, T423e) Length = 297

Iteration: 1
 Score = 43.1 bits (100), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 30/124 (24%), Positives = 53/124 (42%), Gaps = 30/124 (24%)
Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG--- 61
           +H   +IH D+K +N+LL                               ++K+ DFG   
Sbjct: 132 LHSNQVIHRDIKSDNILL---------------------------GMDGSVKLTDFGFCA 164
Query: 62  STTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEH 121
             T E+  ++ +V T ++ APEV+    +    DIWS+G + +E+  GE  +     L  
Sbjct: 165 QITPEQSKRSEMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRA 224
Query: 122 LAMM 125
           L ++
Sbjct: 225 LYLI 228

>pdb|3SOA|A Chain A, Full-Length Human Camkii Length = 444

Iteration: 1
 Score = 43.1 bits (100), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 31/107 (28%), Positives = 46/107 (42%), Gaps = 27/107 (25%)
Query: 6   HDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG-STT 64
           H + ++H +LKPEN+LL S                          K +A+K+ DFG +  
Sbjct: 127 HQMGVVHRNLKPENLLLASK------------------------LKGAAVKLADFGLAIE 162
Query: 65  YERPDQNY--IVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG 109
            E   Q +     T  Y +PEV+    +  P D+W+ G IL  L  G
Sbjct: 163 VEGEQQAWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVG 209

>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With Its Activating Protein Tab1 Length = 307

Iteration: 1
 Score = 43.1 bits (100), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 41/178 (23%), Positives = 71/178 (39%), Gaps = 30/178 (16%)
Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           M    +IH DLKP N+LLV+                            + +K+ DFG+  
Sbjct: 121 MQPKALIHRDLKPPNLLLVAG--------------------------GTVLKICDFGTAC 154
Query: 65  YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAM 124
             +        +  + APEV  G  ++  CD++S G IL E+ T    F          M
Sbjct: 155 DIQTHMTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIM 214
Query: 125 MERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVPFFYGS 182
                G  P  ++K + +  E  + R    W +  + R S++ ++K+    + +F G+
Sbjct: 215 WAVHNGTRPP-LIKNLPKPIESLMTRC---WSKDPSQRPSMEEIVKIMTHLMRYFPGA 268

>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation And Specifity Of A Ste20p Map3k Length = 348

Iteration: 1
 Score = 43.1 bits (100), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 31/109 (28%), Positives = 45/109 (41%), Gaps = 31/109 (28%)
Query: 2   FAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG 61
            A +H   MIH D+K  N+LL                            +   +K+ DFG
Sbjct: 167 LAYLHSHNMIHRDVKAGNILL---------------------------SEPGLVKLGDFG 199
Query: 62  STTYERPDQNYIVSTRHYRAPEVILGLG---WTYPCDIWSVGCILVELC 107
           S +   P  N  V T ++ APEVIL +    +    D+WS+G   +EL 
Sbjct: 200 SASIMAP-ANXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELA 247

>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form Length = 351

Iteration: 1
 Score = 43.1 bits (100), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 33/104 (31%), Positives = 45/104 (43%), Gaps = 21/104 (20%)
Query: 6   HDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTY 65
           HD  +IH D+KP  VLL S E               +S+  K      AI++ + G    
Sbjct: 147 HDNNIIHRDVKPHCVLLASKE---------------NSAPVKLGGFGVAIQLGESGLVAG 191
Query: 66  ERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG 109
            R      V T H+ APEV+    +  P D+W  G IL  L +G
Sbjct: 192 GR------VGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSG 229

>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form With 3 Monomers In The Asymmetric Unit Length = 321

Iteration: 1
 Score = 43.1 bits (100), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 41/153 (26%), Positives = 62/153 (40%), Gaps = 35/153 (22%)
Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           +H   + H DLKPEN++L+    I +P                       IK+IDFG   
Sbjct: 131 LHTKKIAHFDLKPENIMLLDKN-IPIPH----------------------IKLIDFG-LA 166
Query: 65  YERPDQ---NYIVSTRHYRAPEVI----LGLGWTYPCDIWSVGCILVELCTGEALFQTHE 117
           +E  D      I  T  + APE++    LGL      D+WS+G I   L +G + F    
Sbjct: 167 HEIEDGVEFKNIFGTPEFVAPEIVNYEPLGL----EADMWSIGVITYILLSGASPFLGDT 222
Query: 118 NLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRR 150
             E LA +  V     +         A+ ++R+
Sbjct: 223 KQETLANITSVSYDFDEEFFSHTSELAKDFIRK 255

>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol Length = 315

Iteration: 1
 Score = 43.1 bits (100), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 41/178 (23%), Positives = 71/178 (39%), Gaps = 30/178 (16%)
Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           M    +IH DLKP N+LLV+                            + +K+ DFG+  
Sbjct: 122 MQPKALIHRDLKPPNLLLVAG--------------------------GTVLKICDFGTAC 155
Query: 65  YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAM 124
             +        +  + APEV  G  ++  CD++S G IL E+ T    F          M
Sbjct: 156 DIQTHMTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIM 215
Query: 125 MERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVPFFYGS 182
                G  P  ++K + +  E  + R    W +  + R S++ ++K+    + +F G+
Sbjct: 216 WAVHNGTRPP-LIKNLPKPIESLMTRC---WSKDPSQRPSMEEIVKIMTHLMRYFPGA 269

>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1 Catalytic Domain Apo Form Length = 390

Iteration: 1
 Score = 43.1 bits (100), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 40/178 (22%), Positives = 69/178 (38%), Gaps = 54/178 (30%)
Query: 4   VMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGST 63
            +H   ++H+DLKP N L+V                               +K+IDFG  
Sbjct: 170 TIHQHGIVHSDLKPANFLIV----------------------------DGMLKLIDFGIA 201
Query: 64  TYERPDQNYI-----VSTRHYRAPEVILGLGWT-----------YPCDIWSVGCILVELC 107
              +PD   +     V T +Y  PE I  +  +              D+WS+GCIL  + 
Sbjct: 202 NQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMT 261
Query: 108 TGEALFQTHENLEHLAMMERVLGP--------LPQHMLKRVDRHAEKYVRRGRLDWPE 157
            G+  FQ  + +  ++ +  ++ P        +P+  L+ V +   K   + R+  PE
Sbjct: 262 YGKTPFQ--QIINQISKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPE 317

>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The Autoinhibited Conformation Of A Human Death-associated Protein Kinase Length = 321

Iteration: 1
 Score = 43.1 bits (100), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 41/153 (26%), Positives = 62/153 (40%), Gaps = 35/153 (22%)
Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           +H   + H DLKPEN++L+    I +P                       IK+IDFG   
Sbjct: 131 LHTKKIAHFDLKPENIMLLDKN-IPIPH----------------------IKLIDFG-LA 166
Query: 65  YERPDQ---NYIVSTRHYRAPEVI----LGLGWTYPCDIWSVGCILVELCTGEALFQTHE 117
           +E  D      I  T  + APE++    LGL      D+WS+G I   L +G + F    
Sbjct: 167 HEIEDGVEFKNIFGTPEFVAPEIVNYEPLGL----EADMWSIGVITYILLSGASPFLGDT 222
Query: 118 NLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRR 150
             E LA +  V     +         A+ ++R+
Sbjct: 223 KQETLANITSVSYDFDEEFFSHTSELAKDFIRK 255

>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r, T208e Double Mutant Length = 327

Iteration: 1
 Score = 42.7 bits (99), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 39/125 (31%), Positives = 56/125 (44%), Gaps = 29/125 (23%)
Query: 6   HDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDF-GSTT 64
           H   ++H DLK EN+LL +   IK+ D+  S               +   K+ +F GS  
Sbjct: 130 HQKFIVHRDLKAENLLLDADMNIKIADFGFSNEF------------TFGNKLDEFCGSPP 177
Query: 65  YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAM 124
           Y  P+   +   + Y  PEV          D+WS+G IL  L +G   F   +NL+ L  
Sbjct: 178 YAAPE---LFQGKKYDGPEV----------DVWSLGVILYTLVSGSLPFDG-QNLKELR- 222
Query: 125 MERVL 129
            ERVL
Sbjct: 223 -ERVL 226

>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure Length = 309

Iteration: 1
 Score = 42.7 bits (99), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 31/109 (28%), Positives = 45/109 (41%), Gaps = 31/109 (28%)
Query: 2   FAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG 61
            A +H   MIH D+K  N+LL                            +   +K+ DFG
Sbjct: 128 LAYLHSHNMIHRDVKAGNILL---------------------------SEPGLVKLGDFG 160
Query: 62  STTYERPDQNYIVSTRHYRAPEVILGLG---WTYPCDIWSVGCILVELC 107
           S +   P  N  V T ++ APEVIL +    +    D+WS+G   +EL 
Sbjct: 161 SASIMAP-ANXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELA 208

>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1 Reveals A Novel Autoinhibitory Conformation For A Dual Kinase Protein Length = 355

Iteration: 1
 Score = 42.7 bits (99), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 37/138 (26%), Positives = 57/138 (41%), Gaps = 29/138 (21%)
Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           +H L +I+ D+K EN+LL S+ ++ + D+  S          K        +  DF  T 
Sbjct: 175 LHKLGIIYRDIKLENILLDSNGHVVLTDFGLS----------KEFVADETERAYDFCGTI 224
Query: 65  YERPDQNYIVSTRHYRAPEVILG--LGWTYPCDIWSVGCILVELCTGEALFQTH-ENLEH 121
                         Y AP+++ G   G     D WS+G ++ EL TG + F    E    
Sbjct: 225 -------------EYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQ 271
Query: 122 LAMMERVLG---PLPQHM 136
             +  R+L    P PQ M
Sbjct: 272 AEISRRILKSEPPYPQEM 289

>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1 Bound To Atp And Magnesium Chloride At 2.7a Length = 543

Iteration: 1
 Score = 42.7 bits (99), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 30/126 (23%), Positives = 54/126 (42%), Gaps = 25/126 (19%)
Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           +H   +I+ DLKPENVLL     +++ D   ++             K+   K   +  T 
Sbjct: 305 LHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVEL-----------KAGQTKTKGYAGTP 353
Query: 65  YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTH-ENLEHLA 123
                         + APE++LG  + +  D +++G  L E+      F+   E +E+  
Sbjct: 354 -------------GFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKE 400
Query: 124 MMERVL 129
           + +RVL
Sbjct: 401 LKQRVL 406

>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In Complex With Atp Length = 342

Iteration: 1
 Score = 42.7 bits (99), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 40/178 (22%), Positives = 69/178 (38%), Gaps = 54/178 (30%)
Query: 4   VMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGST 63
            +H   ++H+DLKP N L+V                               +K+IDFG  
Sbjct: 170 TIHQHGIVHSDLKPANFLIV----------------------------DGMLKLIDFGIA 201
Query: 64  TYERPDQNYI-----VSTRHYRAPEVILGLGWT-----------YPCDIWSVGCILVELC 107
              +PD   +     V T +Y  PE I  +  +              D+WS+GCIL  + 
Sbjct: 202 NQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMT 261
Query: 108 TGEALFQTHENLEHLAMMERVLGP--------LPQHMLKRVDRHAEKYVRRGRLDWPE 157
            G+  FQ  + +  ++ +  ++ P        +P+  L+ V +   K   + R+  PE
Sbjct: 262 YGKTPFQ--QIINQISKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPE 317

>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1 Bound To Atp And Magnesium Chloride At 2.9a Length = 543

Iteration: 1
 Score = 42.7 bits (99), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 30/126 (23%), Positives = 54/126 (42%), Gaps = 25/126 (19%)
Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           +H   +I+ DLKPENVLL     +++ D   ++             K+   K   +  T 
Sbjct: 305 LHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVEL-----------KAGQTKTKGYAGTP 353
Query: 65  YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTH-ENLEHLA 123
                         + APE++LG  + +  D +++G  L E+      F+   E +E+  
Sbjct: 354 -------------GFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKE 400
Query: 124 MMERVL 129
           + +RVL
Sbjct: 401 LKQRVL 406

>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution Length = 543

Iteration: 1
 Score = 42.7 bits (99), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 30/126 (23%), Positives = 54/126 (42%), Gaps = 25/126 (19%)
Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           +H   +I+ DLKPENVLL     +++ D   ++             K+   K   +  T 
Sbjct: 305 LHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVEL-----------KAGQTKTKGYAGTP 353
Query: 65  YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTH-ENLEHLA 123
                         + APE++LG  + +  D +++G  L E+      F+   E +E+  
Sbjct: 354 -------------GFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKE 400
Query: 124 MMERVL 129
           + +RVL
Sbjct: 401 LKQRVL 406

>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain Length = 343

Iteration: 1
 Score = 42.7 bits (99), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 40/178 (22%), Positives = 69/178 (38%), Gaps = 54/178 (30%)
Query: 4   VMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGST 63
            +H   ++H+DLKP N L+V                               +K+IDFG  
Sbjct: 123 TIHQHGIVHSDLKPANFLIV----------------------------DGMLKLIDFGIA 154
Query: 64  TYERPDQNYI-----VSTRHYRAPEVILGLGWT-----------YPCDIWSVGCILVELC 107
              +PD   +     V T +Y  PE I  +  +              D+WS+GCIL  + 
Sbjct: 155 NQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMT 214
Query: 108 TGEALFQTHENLEHLAMMERVLGP--------LPQHMLKRVDRHAEKYVRRGRLDWPE 157
            G+  FQ  + +  ++ +  ++ P        +P+  L+ V +   K   + R+  PE
Sbjct: 215 YGKTPFQ--QIINQISKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPE 270

>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C DOUBLE MUTANT Complexed With Adp And Mg Length = 543

Iteration: 1
 Score = 42.4 bits (98), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 30/126 (23%), Positives = 54/126 (42%), Gaps = 25/126 (19%)
Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           +H   +I+ DLKPENVLL     +++ D   ++             K+   K   +  T 
Sbjct: 305 LHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVEL-----------KAGQTKTKGYAGTP 353
Query: 65  YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTH-ENLEHLA 123
                         + APE++LG  + +  D +++G  L E+      F+   E +E+  
Sbjct: 354 -------------GFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKE 400
Query: 124 MMERVL 129
           + +RVL
Sbjct: 401 LKQRVL 406

>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis SerineTHREONINE Kinase, Pkne Length = 309

Iteration: 1
 Score = 42.4 bits (98), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 35/146 (23%), Positives = 61/146 (41%), Gaps = 24/146 (16%)
Query: 12  HTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQN 71
           H D+KPEN+L+ + ++  + D+  +  T  +             K+   G+T        
Sbjct: 157 HRDVKPENILVSADDFAYLVDFGIASATTDE-------------KLTQLGNT-------- 195
Query: 72  YIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGP 131
             V T +Y APE       TY  DI+++ C+L E  TG   +Q  +     A + + + P
Sbjct: 196 --VGTLYYXAPERFSESHATYRADIYALTCVLYECLTGSPPYQGDQLSVXGAHINQAI-P 252
Query: 132 LPQHMLKRVDRHAEKYVRRGRLDWPE 157
            P  +   +    +  + RG    PE
Sbjct: 253 RPSTVRPGIPVAFDAVIARGXAKNPE 278

>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase (ttk) Length = 313

Iteration: 1
 Score = 42.4 bits (98), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 40/177 (22%), Positives = 69/177 (38%), Gaps = 54/177 (30%)
Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           +H   ++H+DLKP N L+V                               +K+IDFG   
Sbjct: 143 IHQHGIVHSDLKPANFLIV----------------------------DGMLKLIDFGIAN 174
Query: 65  YERPDQNYI-----VSTRHYRAPEVILGLGWT-----------YPCDIWSVGCILVELCT 108
             +PD   +     V T +Y  PE I  +  +              D+WS+GCIL  +  
Sbjct: 175 QMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTY 234
Query: 109 GEALFQTHENLEHLAMMERVLGP--------LPQHMLKRVDRHAEKYVRRGRLDWPE 157
           G+  FQ  + +  ++ +  ++ P        +P+  L+ V +   K   + R+  PE
Sbjct: 235 GKTPFQ--QIINQISKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPE 289

>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715 Length = 317

Iteration: 1
 Score = 42.4 bits (98), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 40/177 (22%), Positives = 69/177 (38%), Gaps = 54/177 (30%)
Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           +H   ++H+DLKP N L+V                               +K+IDFG   
Sbjct: 127 IHQHGIVHSDLKPANFLIV----------------------------DGMLKLIDFGIAN 158
Query: 65  YERPDQNYI-----VSTRHYRAPEVILGLGWT-----------YPCDIWSVGCILVELCT 108
             +PD   +     V T +Y  PE I  +  +              D+WS+GCIL  +  
Sbjct: 159 QMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTY 218
Query: 109 GEALFQTHENLEHLAMMERVLGP--------LPQHMLKRVDRHAEKYVRRGRLDWPE 157
           G+  FQ  + +  ++ +  ++ P        +P+  L+ V +   K   + R+  PE
Sbjct: 219 GKTPFQ--QIINQISKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPE 273

>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092, Delete A660- T867) At 2.28 A Resolution Length = 299

Iteration: 1
 Score = 42.4 bits (98), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 28/102 (27%), Positives = 45/102 (44%), Gaps = 12/102 (11%)
Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           +H   ++H DLKP N+     + +KV D+               M +    + +      
Sbjct: 134 LHSKGLMHRDLKPSNIFFTMDDVVKVGDF----------GLVTAMDQDEEEQTVLTPMPA 183
Query: 65  YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVEL 106
           Y R      V T+ Y +PE I G  +++  DI+S+G IL EL
Sbjct: 184 YAR--HTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFEL 223

>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase (Ttk) In Complex With A Pyrimido-Diazepin Ligand Length = 313

Iteration: 1
 Score = 42.4 bits (98), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 40/177 (22%), Positives = 69/177 (38%), Gaps = 54/177 (30%)
Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           +H   ++H+DLKP N L+V                               +K+IDFG   
Sbjct: 143 IHQHGIVHSDLKPANFLIVDG----------------------------MLKLIDFGIAN 174
Query: 65  YERPDQNYIV-----STRHYRAPEVILGLGWT-----------YPCDIWSVGCILVELCT 108
             +PD   +V      T +Y  PE I  +  +              D+WS+GCIL  +  
Sbjct: 175 QMQPDXXXVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTY 234
Query: 109 GEALFQTHENLEHLAMMERVLGP--------LPQHMLKRVDRHAEKYVRRGRLDWPE 157
           G+  FQ  + +  ++ +  ++ P        +P+  L+ V +   K   + R+  PE
Sbjct: 235 GKTPFQ--QIINQISKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPE 289

>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2- Yl)amino]benzamide Length = 320

Iteration: 1
 Score = 42.4 bits (98), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 40/177 (22%), Positives = 69/177 (38%), Gaps = 54/177 (30%)
Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           +H   ++H+DLKP N L+V                               +K+IDFG   
Sbjct: 123 IHQHGIVHSDLKPANFLIV----------------------------DGMLKLIDFGIAN 154
Query: 65  YERPDQNYI-----VSTRHYRAPEVILGLGWT-----------YPCDIWSVGCILVELCT 108
             +PD   +     V T +Y  PE I  +  +              D+WS+GCIL  +  
Sbjct: 155 QMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTY 214
Query: 109 GEALFQTHENLEHLAMMERVLGP--------LPQHMLKRVDRHAEKYVRRGRLDWPE 157
           G+  FQ  + +  ++ +  ++ P        +P+  L+ V +   K   + R+  PE
Sbjct: 215 GKTPFQ--QIINQISKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPE 269

>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1: Inactive Double Mutant With Selenomethionine Length = 327

Iteration: 1
 Score = 42.4 bits (98), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 39/124 (31%), Positives = 55/124 (44%), Gaps = 27/124 (21%)
Query: 6   HDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTY 65
           H   ++H DLK EN+LL +   IK+ D+         S+ F    K  A      G+  Y
Sbjct: 130 HQKFIVHRDLKAENLLLDADXNIKIADFGF-------SNEFTFGNKLDAF----CGAPPY 178
Query: 66  ERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMM 125
             P+   +   + Y  PEV          D+WS+G IL  L +G   F   +NL+ L   
Sbjct: 179 AAPE---LFQGKKYDGPEV----------DVWSLGVILYTLVSGSLPFDG-QNLKEL--R 222
Query: 126 ERVL 129
           ERVL
Sbjct: 223 ERVL 226

>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1) Length = 350

Iteration: 1
 Score = 42.4 bits (98), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 28/116 (24%), Positives = 49/116 (42%), Gaps = 34/116 (29%)
Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG--- 61
           +HD  ++H D+K +N+ L                            K   +++ DFG   
Sbjct: 141 VHDRKILHRDIKSQNIFLT---------------------------KDGTVQLGDFGIAR 173
Query: 62  --STTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQT 115
             ++T E       + T +Y +PE+     +    DIW++GC+L ELCT +  F+ 
Sbjct: 174 VLNSTVELA--RACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEA 227

>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES BY Mimicking Host Substrates Length = 319

Iteration: 1
 Score = 42.0 bits (97), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 37/124 (29%), Positives = 56/124 (45%), Gaps = 27/124 (21%)
Query: 6   HDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTY 65
           H   ++H DLK EN+LL +   IK+ D+  S     + ++  ++           GS  Y
Sbjct: 123 HQKFIVHRDLKAENLLLDADMNIKIADFGFS----NEFTFGNKLDTFC-------GSPPY 171
Query: 66  ERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMM 125
             P+   +   + Y  PEV          D+WS+G IL  L +G   F   +NL+ L   
Sbjct: 172 AAPE---LFQGKKYDGPEV----------DVWSLGVILYTLVSGSLPFDG-QNLKELR-- 215
Query: 126 ERVL 129
           ERVL
Sbjct: 216 ERVL 219

>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1: K82r Mutant Length = 327

Iteration: 1
 Score = 42.0 bits (97), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 37/124 (29%), Positives = 56/124 (45%), Gaps = 27/124 (21%)
Query: 6   HDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTY 65
           H   ++H DLK EN+LL +   IK+ D+  S     + ++  ++           GS  Y
Sbjct: 130 HQKFIVHRDLKAENLLLDADMNIKIADFGFS----NEFTFGNKLDTFC-------GSPPY 178
Query: 66  ERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMM 125
             P+   +   + Y  PEV          D+WS+G IL  L +G   F   +NL+ L   
Sbjct: 179 AAPE---LFQGKKYDGPEV----------DVWSLGVILYTLVSGSLPFDG-QNLKELR-- 222
Query: 126 ERVL 129
           ERVL
Sbjct: 223 ERVL 226

>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast Amp-Activated Protein Kinase Snf1 Length = 275

Iteration: 1
 Score = 42.0 bits (97), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 32/99 (32%), Positives = 46/99 (46%), Gaps = 25/99 (25%)
Query: 10  MIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD 69
           ++H DLKPEN+LL     +K+ D+  S +   D ++ K             GS  Y  P+
Sbjct: 133 IVHRDLKPENLLLDEHLNVKIADFGLS-NIMTDGNFLKT----------SCGSPNYAAPE 181
Query: 70  QNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCIL-VELC 107
              ++S + Y  PEV          D+WS G IL V LC
Sbjct: 182 ---VISGKLYAGPEV----------DVWSCGVILYVMLC 207

>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant Length = 327

Iteration: 1
 Score = 42.0 bits (97), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 37/124 (29%), Positives = 56/124 (45%), Gaps = 27/124 (21%)
Query: 6   HDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTY 65
           H   ++H DLK EN+LL +   IK+ D+  S     + ++  ++           GS  Y
Sbjct: 130 HQKFIVHRDLKAENLLLDADMNIKIADFGFS----NEFTFGNKLDTFC-------GSPPY 178
Query: 66  ERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMM 125
             P+   +   + Y  PEV          D+WS+G IL  L +G   F   +NL+ L   
Sbjct: 179 AAPE---LFQGKKYDGPEV----------DVWSLGVILYTLVSGSLPFDG-QNLKELR-- 222
Query: 126 ERVL 129
           ERVL
Sbjct: 223 ERVL 226

>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain Length = 283

Iteration: 1
 Score = 42.0 bits (97), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 32/99 (32%), Positives = 46/99 (46%), Gaps = 25/99 (25%)
Query: 10  MIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD 69
           ++H DLKPEN+LL     +K+ D+  S +   D ++ K             GS  Y  P+
Sbjct: 134 IVHRDLKPENLLLDEHLNVKIADFGLS-NIMTDGNFLKT----------SCGSPNYAAPE 182
Query: 70  QNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCIL-VELC 107
              ++S + Y  PEV          D+WS G IL V LC
Sbjct: 183 ---VISGKLYAGPEV----------DVWSCGVILYVMLC 208

>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1: Wild Type Length = 327

Iteration: 1
 Score = 42.0 bits (97), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 37/124 (29%), Positives = 56/124 (45%), Gaps = 27/124 (21%)
Query: 6   HDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTY 65
           H   ++H DLK EN+LL +   IK+ D+  S     + ++  ++           GS  Y
Sbjct: 130 HQKFIVHRDLKAENLLLDADMNIKIADFGFS----NEFTFGNKLDTFC-------GSPPY 178
Query: 66  ERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMM 125
             P+   +   + Y  PEV          D+WS+G IL  L +G   F   +NL+ L   
Sbjct: 179 AAPE---LFQGKKYDGPEV----------DVWSLGVILYTLVSGSLPFDG-QNLKELR-- 222
Query: 126 ERVL 129
           ERVL
Sbjct: 223 ERVL 226

>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha (Mrck Alpha) Length = 437

Iteration: 1
 Score = 42.0 bits (97), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 40/155 (25%), Positives = 66/155 (42%), Gaps = 35/155 (22%)
Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           +H L  +H D+KP+N+L+  + +I++ D+ S L   +D +      +SS           
Sbjct: 191 VHQLHYVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGTV-----QSSV---------- 235
Query: 65  YERPDQNYIVSTRHYRAPEVIL----GLGWTYP-CDIWSVGCILVELCTGEALFQTHENL 119
                    V T  Y +PE++     G G   P CD WS+G  + E+  GE  F     +
Sbjct: 236 --------AVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLV 287
Query: 120 EHLAMM----ERVLGPLPQHMLKRVDRHAEKYVRR 150
           E    +    ER   P     +  V  +A+  +RR
Sbjct: 288 ETYGKIMNHKERFQFPT---QVTDVSENAKDLIRR 319

>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast Snf1 Length = 274

Iteration: 1
 Score = 42.0 bits (97), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 32/99 (32%), Positives = 46/99 (46%), Gaps = 25/99 (25%)
Query: 10  MIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD 69
           ++H DLKPEN+LL     +K+ D+  S +   D ++ K             GS  Y  P+
Sbjct: 128 IVHRDLKPENLLLDEHLNVKIADFGLS-NIMTDGNFLKT----------SCGSPNYAAPE 176
Query: 70  QNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCIL-VELC 107
              ++S + Y  PEV          D+WS G IL V LC
Sbjct: 177 ---VISGKLYAGPEV----------DVWSCGVILYVMLC 202

>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain Length = 306

Iteration: 1
 Score = 42.0 bits (97), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 20/61 (32%), Positives = 35/61 (57%), Gaps = 3/61 (4%)
Query: 53  SAIKVIDFG---STTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG 109
            ++K+ DFG     T E+  ++ +V T ++ APEV+    +    DIWS+G + +E+  G
Sbjct: 154 GSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEG 213
Query: 110 E 110
           E
Sbjct: 214 E 214

>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of The Saccharomyces Cerevisiae Ampk Homolog Snf1 Length = 271

Iteration: 1
 Score = 42.0 bits (97), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 32/99 (32%), Positives = 46/99 (46%), Gaps = 25/99 (25%)
Query: 10  MIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD 69
           ++H DLKPEN+LL     +K+ D+  S +   D ++ K             GS  Y  P+
Sbjct: 124 IVHRDLKPENLLLDEHLNVKIADFGLS-NIMTDGNFLKT----------SCGSPNYAAPE 172
Query: 70  QNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCIL-VELC 107
              ++S + Y  PEV          D+WS G IL V LC
Sbjct: 173 ---VISGKLYAGPEV----------DVWSCGVILYVMLC 198

>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment Length = 336

Iteration: 1
 Score = 42.0 bits (97), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 29/104 (27%), Positives = 47/104 (45%), Gaps = 24/104 (23%)
Query: 10  MIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD 69
           ++H DLKPEN+LL  +  +K+ D+  S +   D ++ K             GS  Y  P+
Sbjct: 129 IVHRDLKPENLLLDDNLNVKIADFGLS-NIMTDGNFLK----------TSCGSPNYAAPE 177
Query: 70  QNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALF 113
              +++ + Y  PEV          D+WS G +L  +  G   F
Sbjct: 178 ---VINGKLYAGPEV----------DVWSCGIVLYVMLVGRLPF 208

>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1: T208aS212A INACTIVE DOUBLE MUTANT Length = 327

Iteration: 1
 Score = 42.0 bits (97), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 39/124 (31%), Positives = 55/124 (44%), Gaps = 27/124 (21%)
Query: 6   HDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTY 65
           H   ++H DLK EN+LL +   IK+ D+         S+ F    K  A      G+  Y
Sbjct: 130 HQKFIVHRDLKAENLLLDADMNIKIADFGF-------SNEFTFGNKLDAF----CGAPPY 178
Query: 66  ERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMM 125
             P+   +   + Y  PEV          D+WS+G IL  L +G   F   +NL+ L   
Sbjct: 179 AAPE---LFQGKKYDGPEV----------DVWSLGVILYTLVSGSLPFDG-QNLKELR-- 222
Query: 126 ERVL 129
           ERVL
Sbjct: 223 ERVL 226

>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase (gak) Length = 337

Iteration: 1
 Score = 41.6 bits (96), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 33/102 (32%), Positives = 49/102 (48%), Gaps = 17/102 (16%)
Query: 10  MIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD 69
           +IH DLK EN+LL +   IK+ D+ S+        Y     + + ++         E   
Sbjct: 159 IIHRDLKVENLLLSNQGTIKLCDFGSATTISHYPDYSWSAQRRALVE---------EEIT 209
Query: 70  QNYIVSTRHYRAPEVILGLGWTYPC----DIWSVGCILVELC 107
           +N   +T  YR PE+I  L   +P     DIW++GCIL  LC
Sbjct: 210 RN---TTPMYRTPEII-DLYSNFPIGEKQDIWALGCILYLLC 247

>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex With Atp- Competitive Inhibitors Length = 335

Iteration: 1
 Score = 41.6 bits (96), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 31/129 (24%), Positives = 50/129 (38%), Gaps = 26/129 (20%)
Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           +H   +++ D+K EN++L    +IK+ D+        D +  K                 
Sbjct: 121 LHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKX---------------- 164
Query: 65  YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALF--QTHENLEHL 122
                      T  Y APEV+    +    D W +G ++ E+  G   F  Q HE L  L
Sbjct: 165 --------FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFEL 216
Query: 123 AMMERVLGP 131
            +ME +  P
Sbjct: 217 ILMEEIRFP 225

>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b Length = 317

Iteration: 1
 Score = 41.6 bits (96), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 31/108 (28%), Positives = 47/108 (43%), Gaps = 29/108 (26%)
Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           +H   + H D+KPEN+L  S E                        K + +K+ DFG   
Sbjct: 125 LHSHNIAHRDVKPENLLYTSKE------------------------KDAVLKLTDFGFA- 159
Query: 65  YERPDQNYIVS---TRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG 109
            +   QN + +   T +Y APEV+    +   CD+WS+G I+  L  G
Sbjct: 160 -KETTQNALQTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCG 206

>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated Protein Kinase-Activated Protein Kinase 3 (Mk3)-Inhibitor Complex Length = 336

Iteration: 1
 Score = 41.6 bits (96), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 31/108 (28%), Positives = 47/108 (43%), Gaps = 29/108 (26%)
Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           +H   + H D+KPEN+L  S E                        K + +K+ DFG   
Sbjct: 144 LHSHNIAHRDVKPENLLYTSKE------------------------KDAVLKLTDFGFA- 178
Query: 65  YERPDQNYIVS---TRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG 109
            +   QN + +   T +Y APEV+    +   CD+WS+G I+  L  G
Sbjct: 179 -KETTQNALQTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCG 225

>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy) Ethylamino)ethyl) Amide Length = 342

Iteration: 1
 Score = 41.6 bits (96), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 31/129 (24%), Positives = 50/129 (38%), Gaps = 26/129 (20%)
Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           +H   +++ D+K EN++L    +IK+ D+        D +  K                 
Sbjct: 126 LHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKX---------------- 169
Query: 65  YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALF--QTHENLEHL 122
                      T  Y APEV+    +    D W +G ++ E+  G   F  Q HE L  L
Sbjct: 170 --------FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFEL 221
Query: 123 AMMERVLGP 131
            +ME +  P
Sbjct: 222 ILMEEIRFP 230

>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B (pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3 Peptide Length = 337

Iteration: 1
 Score = 41.6 bits (96), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 31/129 (24%), Positives = 50/129 (38%), Gaps = 26/129 (20%)
Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           +H   +++ D+K EN++L    +IK+ D+        D +  K                 
Sbjct: 121 LHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKX---------------- 164
Query: 65  YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALF--QTHENLEHL 122
                      T  Y APEV+    +    D W +G ++ E+  G   F  Q HE L  L
Sbjct: 165 --------FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFEL 216
Query: 123 AMMERVLGP 131
            +ME +  P
Sbjct: 217 ILMEEIRFP 225

>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide Substrate Complex: Kinase Substrate Recognition Length = 277

Iteration: 1
 Score = 41.6 bits (96), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 35/131 (26%), Positives = 51/131 (38%), Gaps = 31/131 (23%)
Query: 1   MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDF 60
           +   +H L ++H DLKPEN+LL     IK+ D+  S                     +D 
Sbjct: 123 VICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQ-------------------LDP 163
Query: 61  GSTTYERPDQNYIVSTRHYRAPEVILGL------GWTYPCDIWSVGCILVELCTGEALFQ 114
           G    E      +  T  Y APE+I         G+    D+WS G I+  L  G   F 
Sbjct: 164 GEKLRE------VCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFW 217
Query: 115 THENLEHLAMM 125
             + +  L M+
Sbjct: 218 HRKQMLMLRMI 228

>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain Length = 335

Iteration: 1
 Score = 41.6 bits (96), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 31/129 (24%), Positives = 50/129 (38%), Gaps = 26/129 (20%)
Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           +H   +++ D+K EN++L    +IK+ D+        D +  K                 
Sbjct: 121 LHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKT---------------- 164
Query: 65  YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALF--QTHENLEHL 122
                      T  Y APEV+    +    D W +G ++ E+  G   F  Q HE L  L
Sbjct: 165 --------FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFEL 216
Query: 123 AMMERVLGP 131
            +ME +  P
Sbjct: 217 ILMEEIRFP 225

>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d With Gsk3 Peptide And Amp-Pnp Length = 336

Iteration: 1
 Score = 41.6 bits (96), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 31/129 (24%), Positives = 50/129 (38%), Gaps = 26/129 (20%)
Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           +H   +++ D+K EN++L    +IK+ D+        D +  K                 
Sbjct: 121 LHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKX---------------- 164
Query: 65  YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALF--QTHENLEHL 122
                      T  Y APEV+    +    D W +G ++ E+  G   F  Q HE L  L
Sbjct: 165 --------FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFEL 216
Query: 123 AMMERVLGP 131
            +ME +  P
Sbjct: 217 ILMEEIRFP 225

>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain Length = 339

Iteration: 1
 Score = 41.6 bits (96), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 31/129 (24%), Positives = 50/129 (38%), Gaps = 26/129 (20%)
Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           +H   +++ D+K EN++L    +IK+ D+        D +  K                 
Sbjct: 124 LHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKT---------------- 167
Query: 65  YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALF--QTHENLEHL 122
                      T  Y APEV+    +    D W +G ++ E+  G   F  Q HE L  L
Sbjct: 168 --------FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFEL 219
Query: 123 AMMERVLGP 131
            +ME +  P
Sbjct: 220 ILMEEIRFP 228

>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta (I4122) Length = 677

Iteration: 1
 Score = 41.6 bits (96), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 32/105 (30%), Positives = 44/105 (41%), Gaps = 22/105 (20%)
Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           +H+  +IH DLKPEN++L        P  +  +H   D  Y K +         D G   
Sbjct: 138 LHENRIIHRDLKPENIVLQ-------PGPQRLIHKIIDLGYAKEL---------DQGELC 181
Query: 65  YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG 109
            E       V T  Y APE++    +T   D WS G +  E  TG
Sbjct: 182 TE------FVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITG 220

>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a Double Mutant Length = 328

Iteration: 1
 Score = 41.6 bits (96), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 39/124 (31%), Positives = 55/124 (44%), Gaps = 27/124 (21%)
Query: 6   HDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTY 65
           H   ++H DLK EN+LL +   IK+ D+         S+ F    K  A      G+  Y
Sbjct: 131 HQKRIVHRDLKAENLLLDADMNIKIADFGF-------SNEFTVGGKLDAF----CGAPPY 179
Query: 66  ERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMM 125
             P+   +   + Y  PEV          D+WS+G IL  L +G   F   +NL+ L   
Sbjct: 180 AAPE---LFQGKKYDGPEV----------DVWSLGVILYTLVSGSLPFDG-QNLKELR-- 223
Query: 126 ERVL 129
           ERVL
Sbjct: 224 ERVL 227

>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase, Kinase: An Active Protein Kinase Complexed With Nucleotide, Substrate-Analogue And Product Length = 298

Iteration: 1
 Score = 41.6 bits (96), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 35/131 (26%), Positives = 51/131 (38%), Gaps = 31/131 (23%)
Query: 1   MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDF 60
           +   +H L ++H DLKPEN+LL     IK+ D+  S                     +D 
Sbjct: 136 VICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQ-------------------LDP 176
Query: 61  GSTTYERPDQNYIVSTRHYRAPEVILGL------GWTYPCDIWSVGCILVELCTGEALFQ 114
           G    E      +  T  Y APE+I         G+    D+WS G I+  L  G   F 
Sbjct: 177 GEKLRE------VCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFW 230
Query: 115 THENLEHLAMM 125
             + +  L M+
Sbjct: 231 HRKQMLMLRMI 241

>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta Length = 676

Iteration: 1
 Score = 41.2 bits (95), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 32/105 (30%), Positives = 44/105 (41%), Gaps = 22/105 (20%)
Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           +H+  +IH DLKPEN++L        P  +  +H   D  Y K +         D G   
Sbjct: 137 LHENRIIHRDLKPENIVLQ-------PGPQRLIHKIIDLGYAKEL---------DQGELC 180
Query: 65  YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG 109
            E       V T  Y APE++    +T   D WS G +  E  TG
Sbjct: 181 TE------FVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITG 219

>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a Mutant In Complex With Sp600125 Inhibitor Length = 390

Iteration: 1
 Score = 41.2 bits (95), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 39/178 (21%), Positives = 68/178 (38%), Gaps = 54/178 (30%)
Query: 4   VMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGST 63
            +H   ++H+DLKP N L+V                               +K+IDFG  
Sbjct: 170 TIHQHGIVHSDLKPANFLIV----------------------------DGMLKLIDFGIA 201
Query: 64  TYERPDQNYIVSTR-----HYRAPEVILGLGWT-----------YPCDIWSVGCILVELC 107
              +PD   +V        +Y  PE I  +  +              D+WS+GCIL  + 
Sbjct: 202 NQMQPDTTSVVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMT 261
Query: 108 TGEALFQTHENLEHLAMMERVLGP--------LPQHMLKRVDRHAEKYVRRGRLDWPE 157
            G+  FQ  + +  ++ +  ++ P        +P+  L+ V +   K   + R+  PE
Sbjct: 262 YGKTPFQ--QIINQISKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPE 317

>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1 Length = 328

Iteration: 1
 Score = 41.2 bits (95), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 39/125 (31%), Positives = 54/125 (43%), Gaps = 29/125 (23%)
Query: 6   HDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDF-GSTT 64
           H   ++H DLK EN+LL     IK+ D+  S               +   K+  F GS  
Sbjct: 131 HQKYIVHRDLKAENLLLDGDMNIKIADFGFSNEF------------TVGNKLDTFCGSPP 178
Query: 65  YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAM 124
           Y  P+   +   + Y  PEV          D+WS+G IL  L +G   F   +NL+ L  
Sbjct: 179 YAAPE---LFQGKKYDGPEV----------DVWSLGVILYTLVSGSLPFDG-QNLKELR- 223
Query: 125 MERVL 129
            ERVL
Sbjct: 224 -ERVL 227

>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B Akt By Hydrophobic Motif Phosphorylation Length = 315

Iteration: 1
 Score = 41.2 bits (95), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 31/129 (24%), Positives = 50/129 (38%), Gaps = 26/129 (20%)
Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           +H   +++ D+K EN++L    +IK+ D+        D +  K                 
Sbjct: 121 LHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKT---------------- 164
Query: 65  YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALF--QTHENLEHL 122
                      T  Y APEV+    +    D W +G ++ E+  G   F  Q HE L  L
Sbjct: 165 --------FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFEL 216
Query: 123 AMMERVLGP 131
            +ME +  P
Sbjct: 217 ILMEEIRFP 225

>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap Kinase-2 Length = 325

Iteration: 1
 Score = 41.2 bits (95), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 33/118 (27%), Positives = 52/118 (44%), Gaps = 28/118 (23%)
Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           +H + + H D+KPEN+L  S    K P+                    + +K+ DFG   
Sbjct: 138 LHSINIAHRDVKPENLLYTS----KRPN--------------------AILKLTDFGFAK 173
Query: 65  YERPDQNYIVS---TRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENL 119
            E    N + +   T +Y APEV+    +   CD+WS+G I+  L  G   F ++  L
Sbjct: 174 -ETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGL 230

>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk Activation Switch Length = 635

Iteration: 1
 Score = 41.2 bits (95), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 32/130 (24%), Positives = 53/130 (40%), Gaps = 34/130 (26%)
Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           + +   +H DL   NVLLV+  Y K+                            DFG + 
Sbjct: 485 LEESNFVHRDLAARNVLLVTQHYAKIS---------------------------DFGLSK 517
Query: 65  YERPDQNYIVSTRH------YRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHE 117
             R D+NY  +  H      + APE I    ++   D+WS G ++ E  + G+  ++  +
Sbjct: 518 ALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMK 577
Query: 118 NLEHLAMMER 127
             E  AM+E+
Sbjct: 578 GSEVTAMLEK 587

>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands Length = 334

Iteration: 1
 Score = 41.2 bits (95), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 33/118 (27%), Positives = 52/118 (44%), Gaps = 28/118 (23%)
Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           +H + + H D+KPEN+L  S    K P+                    + +K+ DFG   
Sbjct: 147 LHSINIAHRDVKPENLLYTS----KRPN--------------------AILKLTDFGFAK 182
Query: 65  YERPDQNYIVS---TRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENL 119
            E    N + +   T +Y APEV+    +   CD+WS+G I+  L  G   F ++  L
Sbjct: 183 -ETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGL 239

>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2 Length = 400

Iteration: 1
 Score = 41.2 bits (95), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 33/118 (27%), Positives = 52/118 (44%), Gaps = 28/118 (23%)
Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           +H + + H D+KPEN+L  S    K P+                    + +K+ DFG   
Sbjct: 177 LHSINIAHRDVKPENLLYTS----KRPN--------------------AILKLTDFGFAK 212
Query: 65  YERPDQNYIVS---TRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENL 119
            E    N + +   T +Y APEV+    +   CD+WS+G I+  L  G   F ++  L
Sbjct: 213 -ETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGL 269

>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1 Length = 328

Iteration: 1
 Score = 41.2 bits (95), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 39/125 (31%), Positives = 55/125 (44%), Gaps = 29/125 (23%)
Query: 6   HDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDF-GSTT 64
           H   ++H DLK EN+LL +   IK+ D+  S               +   K+  F GS  
Sbjct: 128 HQKRIVHRDLKAENLLLDADMNIKIADFGFSNEF------------TVGGKLDTFCGSPP 175
Query: 65  YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAM 124
           Y  P+   +   + Y  PEV          D+WS+G IL  L +G   F   +NL+ L  
Sbjct: 176 YAAPE---LFQGKKYDGPEV----------DVWSLGVILYTLVSGSLPFDG-QNLKELR- 220
Query: 125 MERVL 129
            ERVL
Sbjct: 221 -ERVL 224

>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76 Length = 324

Iteration: 1
 Score = 41.2 bits (95), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 33/118 (27%), Positives = 52/118 (44%), Gaps = 28/118 (23%)
Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           +H + + H D+KPEN+L  S    K P+                    + +K+ DFG   
Sbjct: 137 LHSINIAHRDVKPENLLYTS----KRPN--------------------AILKLTDFGFAK 172
Query: 65  YERPDQNYIVS---TRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENL 119
            E    N + +   T +Y APEV+    +   CD+WS+G I+  L  G   F ++  L
Sbjct: 173 -ETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGL 229

>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal Form-1, Soaking) Length = 326

Iteration: 1
 Score = 41.2 bits (95), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 33/118 (27%), Positives = 52/118 (44%), Gaps = 28/118 (23%)
Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           +H + + H D+KPEN+L  S    K P+                    + +K+ DFG   
Sbjct: 139 LHSINIAHRDVKPENLLYTS----KRPN--------------------AILKLTDFGFAK 174
Query: 65  YERPDQNYIVS---TRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENL 119
            E    N + +   T +Y APEV+    +   CD+WS+G I+  L  G   F ++  L
Sbjct: 175 -ETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGL 231

>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk Activation Switch Length = 636

Iteration: 1
 Score = 41.2 bits (95), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 32/130 (24%), Positives = 53/130 (40%), Gaps = 34/130 (26%)
Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           + +   +H DL   NVLLV+  Y K+                            DFG + 
Sbjct: 486 LEESNFVHRDLAARNVLLVTQHYAKIS---------------------------DFGLSK 518
Query: 65  YERPDQNYIVSTRH------YRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHE 117
             R D+NY  +  H      + APE I    ++   D+WS G ++ E  + G+  ++  +
Sbjct: 519 ALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMK 578
Query: 118 NLEHLAMMER 127
             E  AM+E+
Sbjct: 579 GSEVTAMLEK 588

>pdb|2OZA|A Chain A, Structure Of P38alpha Complex Length = 356

Iteration: 1
 Score = 41.2 bits (95), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 33/118 (27%), Positives = 52/118 (44%), Gaps = 28/118 (23%)
Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           +H + + H D+KPEN+L  S    K P+                    + +K+ DFG   
Sbjct: 133 LHSINIAHRDVKPENLLYTS----KRPN--------------------AILKLTDFGFAK 168
Query: 65  YERPDQNYIVS---TRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENL 119
            E    N + +   T +Y APEV+    +   CD+WS+G I+  L  G   F ++  L
Sbjct: 169 -ETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGL 225

>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer Length = 406

Iteration: 1
 Score = 41.2 bits (95), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 33/118 (27%), Positives = 52/118 (44%), Gaps = 28/118 (23%)
Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           +H + + H D+KPEN+L  S    K P+                    + +K+ DFG   
Sbjct: 183 LHSINIAHRDVKPENLLYTS----KRPN--------------------AILKLTDFGFAK 218
Query: 65  YERPDQNYIVS---TRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENL 119
            E    N + +   T +Y APEV+    +   CD+WS+G I+  L  G   F ++  L
Sbjct: 219 -ETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGL 275

>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With A Sulfonamidopyrazine Piperidine Inhibitor Length = 274

Iteration: 1
 Score = 41.2 bits (95), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 32/124 (25%), Positives = 50/124 (40%), Gaps = 34/124 (27%)
Query: 11  IHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ 70
           +H DL   NVLLV+  Y K+                            DFG +   R D+
Sbjct: 129 VHRDLAARNVLLVTQHYAKIS---------------------------DFGLSKALRADE 161
Query: 71  NYIVSTRH------YRAPEVILGLGWTYPCDIWSVGCILVE-LCTGEALFQTHENLEHLA 123
           NY  +  H      + APE I    ++   D+WS G ++ E    G+  ++  +  E  A
Sbjct: 162 NYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTA 221
Query: 124 MMER 127
           M+E+
Sbjct: 222 MLEK 225

>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain Length = 332

Iteration: 1
 Score = 41.2 bits (95), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 32/107 (29%), Positives = 46/107 (42%), Gaps = 22/107 (20%)
Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           +H   ++H DLKP N+     + +KV D+   L T  D                D    T
Sbjct: 180 LHSKGLMHRDLKPSNIFFTMDDVVKVGDF--GLVTAMDQ---------------DEEEQT 222
Query: 65  YERPDQNYI-----VSTRHYRAPEVILGLGWTYPCDIWSVGCILVEL 106
              P   Y      V T+ Y +PE I G  +++  DI+S+G IL EL
Sbjct: 223 VLTPMPAYATHXGQVGTKLYMSPEQIHGNNYSHKVDIFSLGLILFEL 269

>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1 Length = 319

Iteration: 1
 Score = 41.2 bits (95), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 33/118 (27%), Positives = 52/118 (44%), Gaps = 28/118 (23%)
Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           +H + + H D+KPEN+L  S    K P+                    + +K+ DFG   
Sbjct: 132 LHSINIAHRDVKPENLLYTS----KRPN--------------------AILKLTDFGFAK 167
Query: 65  YERPDQNYIVS---TRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENL 119
            E    N + +   T +Y APEV+    +   CD+WS+G I+  L  G   F ++  L
Sbjct: 168 -ETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGL 224

>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836 Length = 273

Iteration: 1
 Score = 41.2 bits (95), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 32/124 (25%), Positives = 50/124 (40%), Gaps = 34/124 (27%)
Query: 11  IHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ 70
           +H DL   NVLLV+  Y K+                            DFG +   R D+
Sbjct: 127 VHRDLAARNVLLVTQHYAKIS---------------------------DFGLSKALRADE 159
Query: 71  NYIVSTRH------YRAPEVILGLGWTYPCDIWSVGCILVE-LCTGEALFQTHENLEHLA 123
           NY  +  H      + APE I    ++   D+WS G ++ E    G+  ++  +  E  A
Sbjct: 160 NYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTA 219
Query: 124 MMER 127
           M+E+
Sbjct: 220 MLEK 223

>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To Mapkap Kinase-2 Length = 327

Iteration: 1
 Score = 41.2 bits (95), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 33/118 (27%), Positives = 52/118 (44%), Gaps = 28/118 (23%)
Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           +H + + H D+KPEN+L  S    K P+                    + +K+ DFG   
Sbjct: 133 LHSINIAHRDVKPENLLYTS----KRPN--------------------AILKLTDFGFAK 168
Query: 65  YERPDQNYIVS---TRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENL 119
            E    N + +   T +Y APEV+    +   CD+WS+G I+  L  G   F ++  L
Sbjct: 169 -ETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGL 225

>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In Complex With A Diaminopyrimidine Carboxamide Inhibitor Length = 277

Iteration: 1
 Score = 41.2 bits (95), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 32/124 (25%), Positives = 50/124 (40%), Gaps = 34/124 (27%)
Query: 11  IHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ 70
           +H DL   NVLLV+  Y K+                            DFG +   R D+
Sbjct: 133 VHRDLAARNVLLVTQHYAKIS---------------------------DFGLSKALRADE 165
Query: 71  NYIVSTRH------YRAPEVILGLGWTYPCDIWSVGCILVE-LCTGEALFQTHENLEHLA 123
           NY  +  H      + APE I    ++   D+WS G ++ E    G+  ++  +  E  A
Sbjct: 166 NYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTA 225
Query: 124 MMER 127
           M+E+
Sbjct: 226 MLEK 229

>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2- Phenylaminopyrimidines As Potent Inhibitors Of Spleen Tyrosine Kinase (Syk) Length = 291

Iteration: 1
 Score = 40.8 bits (94), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 32/124 (25%), Positives = 50/124 (40%), Gaps = 34/124 (27%)
Query: 11  IHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ 70
           +H DL   NVLLV+  Y K+                            DFG +   R D+
Sbjct: 147 VHRDLAARNVLLVTQHYAKIS---------------------------DFGLSKALRADE 179
Query: 71  NYIVSTRH------YRAPEVILGLGWTYPCDIWSVGCILVE-LCTGEALFQTHENLEHLA 123
           NY  +  H      + APE I    ++   D+WS G ++ E    G+  ++  +  E  A
Sbjct: 180 NYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTA 239
Query: 124 MMER 127
           M+E+
Sbjct: 240 MLEK 243

>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b Length = 318

Iteration: 1
 Score = 40.8 bits (94), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 33/118 (27%), Positives = 52/118 (44%), Gaps = 28/118 (23%)
Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           +H + + H D+KPEN+L  S    K P+                    + +K+ DFG   
Sbjct: 131 LHSINIAHRDVKPENLLYTS----KRPN--------------------AILKLTDFGFAK 166
Query: 65  YERPDQNYIVS---TRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENL 119
            E    N + +   T +Y APEV+    +   CD+WS+G I+  L  G   F ++  L
Sbjct: 167 -ETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGL 223

>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain Length = 291

Iteration: 1
 Score = 40.8 bits (94), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 32/124 (25%), Positives = 50/124 (40%), Gaps = 34/124 (27%)
Query: 11  IHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ 70
           +H DL   NVLLV+  Y K+                            DFG +   R D+
Sbjct: 139 VHRDLAARNVLLVTQHYAKIS---------------------------DFGLSKALRADE 171
Query: 71  NYIVSTRH------YRAPEVILGLGWTYPCDIWSVGCILVE-LCTGEALFQTHENLEHLA 123
           NY  +  H      + APE I    ++   D+WS G ++ E    G+  ++  +  E  A
Sbjct: 172 NYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTA 231
Query: 124 MMER 127
           M+E+
Sbjct: 232 MLEK 235

>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7- Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2- Phenylcyclopropyl)urea Length = 293

Iteration: 1
 Score = 40.8 bits (94), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 32/124 (25%), Positives = 50/124 (40%), Gaps = 34/124 (27%)
Query: 11  IHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ 70
           +H DL   NVLLV+  Y K+                            DFG +   R D+
Sbjct: 149 VHRDLAARNVLLVTQHYAKIS---------------------------DFGLSKALRADE 181
Query: 71  NYIVSTRH------YRAPEVILGLGWTYPCDIWSVGCILVE-LCTGEALFQTHENLEHLA 123
           NY  +  H      + APE I    ++   D+WS G ++ E    G+  ++  +  E  A
Sbjct: 182 NYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTA 241
Query: 124 MMER 127
           M+E+
Sbjct: 242 MLEK 245

>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic Domain With Pyrazolylbenzimidazole Inhibitor 416 Length = 299

Iteration: 1
 Score = 40.8 bits (94), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 32/124 (25%), Positives = 50/124 (40%), Gaps = 34/124 (27%)
Query: 11  IHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ 70
           +H DL   NVLLV+  Y K+                            DFG +   R D+
Sbjct: 149 VHRDLAARNVLLVTQHYAKIS---------------------------DFGLSKALRADE 181
Query: 71  NYIVSTRH------YRAPEVILGLGWTYPCDIWSVGCILVE-LCTGEALFQTHENLEHLA 123
           NY  +  H      + APE I    ++   D+WS G ++ E    G+  ++  +  E  A
Sbjct: 182 NYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTA 241
Query: 124 MMER 127
           M+E+
Sbjct: 242 MLEK 245

>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase 32a (Yank1) Length = 384

Iteration: 1
 Score = 40.8 bits (94), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 26/103 (25%), Positives = 45/103 (43%), Gaps = 28/103 (27%)
Query: 10  MIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD 69
           +IH D+KP+N+LL    ++ + D+  +   P+++                   TT     
Sbjct: 136 IIHRDMKPDNILLDEHGHVHITDFNIAAMLPRETQI-----------------TT----- 173
Query: 70  QNYIVSTRHYRAPEVI---LGLGWTYPCDIWSVGCILVELCTG 109
              +  T+ Y APE+     G G+++  D WS+G    EL  G
Sbjct: 174 ---MAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRG 213

>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii Inhibtor Nvp-Bbt594 Length = 295

Iteration: 1
 Score = 40.4 bits (93), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 26/99 (26%), Positives = 42/99 (42%), Gaps = 23/99 (23%)
Query: 11  IHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFK-RMPKSSAIKVIDFGSTTYERPD 69
           IH DL   N+L+ +   +K+ D+  +   P+D  +FK + P  S I              
Sbjct: 136 IHRDLATRNILVENENRVKIGDFGLTKVLPQDKEFFKVKEPGESPI-------------- 181
Query: 70  QNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT 108
                    + APE +    ++   D+WS G +L EL T
Sbjct: 182 --------FWYAPESLTESKFSVASDVWSFGVVLYELFT 212

>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By Mutational Studies Length = 298

Iteration: 1
 Score = 40.4 bits (93), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 34/133 (25%), Positives = 50/133 (37%), Gaps = 35/133 (26%)
Query: 1   MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDF 60
           +   +H L ++H DLKPEN+LL                                IK+ DF
Sbjct: 136 VICALHKLNIVHRDLKPENILL---------------------------DDDMNIKLTDF 168
Query: 61  GSTTYERPDQNY--IVSTRHYRAPEVILGL------GWTYPCDIWSVGCILVELCTGEAL 112
           G +    P +    +  T  Y APE+I         G+    D+WS G I+  L  G   
Sbjct: 169 GFSCQLDPGEKLRSVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPP 228
Query: 113 FQTHENLEHLAMM 125
           F   + +  L M+
Sbjct: 229 FWHRKQMLMLRMI 241

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	252
1z57_A	339	Dual specificity protein kinase CLK1; protein tyro	2e-94
3llt_A	360	Serine/threonine kinase-1, pflammer; lammer kinase	3e-92
2eu9_A	355	Dual specificity protein kinase CLK3; kinase domai	7e-90
3kvw_A	429	DYRK2, dual specificity tyrosine-phosphorylation-r	1e-71
2vx3_A	382	Dual specificity tyrosine-phosphorylation- regula	3e-71
1q8y_A	373	SR protein kinase; transferase; HET: ADP ADE; 2.05	6e-65
1wak_A	397	Serine/threonine-protein kinase SPRK1; SRPK, trans	4e-53
4e7w_A	394	Glycogen synthase kinase 3; GSK3, PTyr195, transfe	1e-30
4aaa_A	331	Cyclin-dependent kinase-like 2; transferase, phosp	1e-30
4agu_A	311	Cyclin-dependent kinase-like 1; transferase, phosp	7e-30
1j1b_A	420	Glycogen synthase kinase-3 beta; complex, TAU, AMP	3e-29
3gbz_A	329	Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-	7e-29
3nsz_A	330	CK II alpha, casein kinase II subunit alpha; inhib	1e-28
3g33_A	308	Cell division protein kinase 4; Ser/Thr protein ki	2e-28
1ob3_A	288	PFPK5, cell division control protein 2 homolog; tr	4e-28
3oz6_A	388	Mitogen-activated protein kinase 1, serine/threon	5e-28
2i6l_A	320	Mitogen-activated protein kinase 6; MAPK6, ERK3, e	5e-28
3ttj_A	464	Mitogen-activated protein kinase 10; JNK3, protein	7e-28
2r3i_A	299	Cell division protein kinase 2; serine/threonine-p	8e-28
1blx_A	326	Cyclin-dependent kinase 6; inhibitor protein, cycl	1e-27
3niz_A	311	Rhodanese family protein; structural genomics, str	2e-27
2xrw_A	371	Mitogen-activated protein kinase 8; transcription,	2e-27
2pmi_A	317	Negative RE, cyclin-dependent protein kinase PHO85	2e-27
1ua2_A	346	CAK, cell division protein kinase 7; cell cycle, p	3e-27
3e3p_A	360	Protein kinase, putative glycogen synthase kinase;	7e-27
3o0g_A	292	Cell division protein kinase 5; kinase activator c	1e-26
3rgf_A	405	Cyclin-dependent kinase 8; protein kinase complex,	1e-26
3mtl_A	324	Cell division protein kinase 16; pctaire1, indirub	3e-26
3coi_A	353	Mitogen-activated protein kinase 13; P38D, P38delt	3e-26
3eb0_A	383	Putative uncharacterized protein; kinase cryptospo	4e-26
3pg1_A	362	Mitogen-activated protein kinase, putative (MAP K	4e-26
1cm8_A	367	Phosphorylated MAP kinase P38-gamma; phosphorylati	8e-26
3mi9_A	351	Cell division protein kinase 9; P-TEFB, HIV-1, pro	1e-25
2fst_X	367	Mitogen-activated protein kinase 14; active mutant	2e-25
3qyz_A	364	Mitogen-activated protein kinase 1; transferase, s	3e-25
2b9h_A	353	MAP kinase FUS3, mitogen-activated protein kinase	1e-24
3rp9_A	458	Mitogen-activated protein kinase; structural genom	7e-21
3n9x_A	432	Phosphotransferase; malaria kinase, structural gen	4e-20
3e7e_A	365	HBUB1, BUB1A, mitotic checkpoint serine/threonine-	2e-19
4euu_A	319	Serine/threonine-protein kinase TBK1; ATP binding,	1e-18
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	4e-18
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	3e-04
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	5e-18
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	3e-04
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	1e-17
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	2e-04
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	2e-17
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	3e-04
3c0i_A	351	Peripheral plasma membrane protein CASK; neurexin,	2e-17
3c0i_A	351	Peripheral plasma membrane protein CASK; neurexin,	1e-04
2ac3_A	316	MAP kinase-interacting serine/threonine kinase 2;	3e-17
3qa8_A	676	MGC80376 protein; kinase ubiquitin-like domain, ph	5e-17
3q60_A	371	ROP5B; pseudokinase, transferase; HET: ATP; 1.72A	6e-17
3soa_A	444	Calcium/calmodulin-dependent protein kinase type a	7e-17
3soa_A	444	Calcium/calmodulin-dependent protein kinase type a	4e-04
2bdw_A	362	Hypothetical protein K11E8.1D; kinase, calmodulin	1e-16
2bdw_A	362	Hypothetical protein K11E8.1D; kinase, calmodulin	1e-04
2rio_A	434	Serine/threonine-protein kinase/endoribonuclease I	1e-16
2rio_A	434	Serine/threonine-protein kinase/endoribonuclease I	6e-05
3bhy_A	283	Death-associated protein kinase 3; death associate	2e-16
3bhy_A	283	Death-associated protein kinase 3; death associate	7e-04
2y0a_A	326	Death-associated protein kinase 1; transferase, ca	2e-16
3uto_A	573	Twitchin; kinase, muscle sarcomere, transferase; H	3e-16
1tki_A	321	Titin; serine kinase, muscle, autoinhibition; 2.00	3e-16
1tki_A	321	Titin; serine kinase, muscle, autoinhibition; 2.00	8e-04
2w4o_A	349	Calcium/calmodulin-dependent protein kinase type I	3e-16
2w4o_A	349	Calcium/calmodulin-dependent protein kinase type I	8e-04
3kk8_A	284	Calcium/calmodulin dependent protein kinase II; AT	4e-16
3kk8_A	284	Calcium/calmodulin dependent protein kinase II; AT	3e-04
2a2a_A	321	Death-associated protein kinase 2; autoinhibition,	4e-16
2a2a_A	321	Death-associated protein kinase 2; autoinhibition,	9e-04
2yab_A	361	Death-associated protein kinase 2; apoptosis, tran	5e-16
2yab_A	361	Death-associated protein kinase 2; apoptosis, tran	8e-04
4apc_A	350	Serine/threonine-protein kinase NEK1; transferase;	5e-16
3dbq_A	343	Dual specificity protein kinase TTK; MPS1 structur	5e-16
3dbq_A	343	Dual specificity protein kinase TTK; MPS1 structur	2e-06
1zy4_A	303	Serine/threonine-protein kinase GCN2; translation	5e-16
1zy4_A	303	Serine/threonine-protein kinase GCN2; translation	1e-04
3cek_A	313	Dual specificity protein kinase TTK; HMPS1, PYT, E	5e-16
3cek_A	313	Dual specificity protein kinase TTK; HMPS1, PYT, E	1e-06
1kob_A	387	Twitchin; kinase, intrasteric regulation; 2.30A {A	7e-16
1kob_A	387	Twitchin; kinase, intrasteric regulation; 2.30A {A	4e-04
2wei_A	287	Calmodulin-domain protein kinase 1, putative; nucl	8e-16
2wei_A	287	Calmodulin-domain protein kinase 1, putative; nucl	4e-04
3is5_A	285	Calcium-dependent protein kinase; CDPK, structural	8e-16
3is5_A	285	Calcium-dependent protein kinase; CDPK, structural	5e-04
2qr7_A	342	Ribosomal protein S6 kinase alpha-3; kinase domain	1e-15
2qr7_A	342	Ribosomal protein S6 kinase alpha-3; kinase domain	7e-05
3f3z_A	277	Calcium/calmodulin-dependent protein kinase with d	1e-15
3f3z_A	277	Calcium/calmodulin-dependent protein kinase with d	2e-04
2x4f_A	373	Myosin light chain kinase family member 4; LUNG, b	2e-15
1x8b_A	289	WEE1HU, WEE1-like protein kinase; cell cycle, tran	2e-15
4eut_A	396	Serine/threonine-protein kinase TBK1; ATP binding,	2e-15
2w5a_A	279	Serine/threonine-protein kinase NEK2; Ser/Thr prot	2e-15
2w5a_A	279	Serine/threonine-protein kinase NEK2; Ser/Thr prot	5e-04
2zmd_A	390	Dual specificity protein kinase TTK; MPS1, T686A,	2e-15
2zmd_A	390	Dual specificity protein kinase TTK; MPS1, T686A,	3e-06
3hko_A	345	Calcium/calmodulin-dependent protein kinase with d	2e-15
3hko_A	345	Calcium/calmodulin-dependent protein kinase with d	2e-05
3lm5_A	327	Serine/threonine-protein kinase 17B; STK17B, serin	2e-15
3lm5_A	327	Serine/threonine-protein kinase 17B; STK17B, serin	7e-04
2a19_B	284	Interferon-induced, double-stranded RNA-activated	3e-15
2a19_B	284	Interferon-induced, double-stranded RNA-activated	5e-04
3kn6_A	325	Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1	3e-15
3kn6_A	325	Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1	8e-05
1nxk_A	400	MAP kinase-activated protein kinase 2; MK2, phosph	3e-15
1nxk_A	400	MAP kinase-activated protein kinase 2; MK2, phosph	2e-04
3fhr_A	336	MAP kinase-activated protein kinase 3; kinase-inhi	8e-15
3fhr_A	336	MAP kinase-activated protein kinase 3; kinase-inhi	3e-04
2wqm_A	310	Serine/threonine-protein kinase NEK7; ATP-binding,	9e-15
4g3f_A	336	NF-kappa-beta-inducing kinase; non-RD kinase, prot	1e-14
2ycf_A	322	Serine/threonine-protein kinase CHK2; transferase,	1e-14
2ycf_A	322	Serine/threonine-protein kinase CHK2; transferase,	7e-05
3p23_A	432	Serine/threonine-protein kinase/endoribonuclease;	1e-14
3p23_A	432	Serine/threonine-protein kinase/endoribonuclease;	1e-05
3qd2_B	332	Eukaryotic translation initiation factor 2-alpha;	2e-14
3i6u_A	419	CDS1, serine/threonine-protein kinase CHK2; Ser/Th	2e-14
3i6u_A	419	CDS1, serine/threonine-protein kinase CHK2; Ser/Th	4e-05
2buj_A	317	Serine/threonine-protein kinase 16; transferase, A	2e-14
2jam_A	304	Calcium/calmodulin-dependent protein kinase type 1	2e-14
2jam_A	304	Calcium/calmodulin-dependent protein kinase type 1	5e-04
3p1a_A	311	MYT1 kinase, membrane-associated tyrosine- and thr	3e-14
3p1a_A	311	MYT1 kinase, membrane-associated tyrosine- and thr	2e-05
2pml_X	348	PFPK7, Ser/Thr protein kinase; phosphorylati trans	5e-14
2rku_A	294	Serine/threonine-protein kinase PLK1; structure of	7e-14
2owb_A	335	Serine/threonine-protein kinase PLK1; catalytic do	8e-14
3ll6_A	337	Cyclin G-associated kinase; transferase, protein k	1e-13
3eqc_A	360	Dual specificity mitogen-activated protein kinase;	1e-13
2clq_A	295	Mitogen-activated protein kinase kinase kinase 5;	2e-13
4g31_A	299	Eukaryotic translation initiation factor 2-alpha;	6e-13
3cok_A	278	Serine/threonine-protein kinase PLK4; POLO-like ki	7e-13
3cok_A	278	Serine/threonine-protein kinase PLK4; POLO-like ki	8e-04
1phk_A	298	Phosphorylase kinase; glycogen metabolism, transfe	1e-12
1phk_A	298	Phosphorylase kinase; glycogen metabolism, transfe	4e-05
2y7j_A	365	Phosphorylase B kinase gamma catalytic chain, test	2e-12
2y7j_A	365	Phosphorylase B kinase gamma catalytic chain, test	4e-05
2vgo_A	284	Serine/threonine-protein kinase 12-A; nucleotide-b	3e-12
2vgo_A	284	Serine/threonine-protein kinase 12-A; nucleotide-b	7e-04
3fdn_A	279	Serine/threonine-protein kinase 6; aurora kinase i	5e-12
3fdn_A	279	Serine/threonine-protein kinase 6; aurora kinase i	5e-04
1uu3_A	310	HPDK1, 3-phosphoinositide dependent protein kinase	6e-12
2acx_A	576	G protein-coupled receptor kinase 6; GRK, G transf	8e-12
2eva_A	307	TAK1 kinase - TAB1 chimera fusion protein; transfe	9e-12
3pvu_A	695	Beta-adrenergic receptor kinase 1; transferase, se	1e-11
3c4z_A	543	Rhodopsin kinase; Ser/Thr kinase, RGS homology dom	1e-11
3fe3_A	328	MAP/microtubule affinity-regulating kinase 3; seri	1e-11
3dls_A	335	PAS domain-containing serine/threonine-protein KI;	1e-11
2iwi_A	312	Serine/threonine-protein kinase PIM-2; nucleotide-	2e-11
3dtc_A	271	Mitogen-activated protein kinase kinase kinase 9;	2e-11
3gni_B	389	Strad alpha; kinase fold, pseudokinase, alpha heli	3e-11
2pzi_A	681	Probable serine/threonine-protein kinase PKNG; ATP	3e-11
3a99_A	320	Proto-oncogene serine/threonine-protein kinase PI;	4e-11
3byv_A	377	Rhoptry kinase; malaria, transferase, structural g	6e-11
3byv_A	377	Rhoptry kinase; malaria, transferase, structural g	3e-06
2yex_A	276	Serine/threonine-protein kinase CHK1; transferase,	7e-11
3tki_A	323	Serine/threonine-protein kinase CHK1; cell checkpo	1e-10
4f0f_A	287	Serine/threonine-protein kinase ROCO4; LRRK2, ATP-	1e-10
2zv2_A	298	Calcium/calmodulin-dependent protein kinase kinas;	2e-10
3h4j_B	336	AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin	2e-10
3dzo_A	413	Rhoptry kinase domain; parasitic disease, transfer	2e-10
3dzo_A	413	Rhoptry kinase domain; parasitic disease, transfer	2e-05
3v8s_A	410	RHO-associated protein kinase 1; dimerization, myo	2e-10
2h6d_A	276	5'-AMP-activated protein kinase catalytic subunit	3e-10
2vd5_A	412	DMPK protein; serine/threonine-protein kinase, kin	3e-10
2eue_A	275	Carbon catabolite derepressing protein kinase; kin	3e-10
2wtk_C	305	Serine/threonine-protein kinase 11; transferase-me	4e-10
4aw2_A	437	Serine/threonine-protein kinase MRCK alpha; transf	5e-10
2y94_A	476	5'-AMP-activated protein kinase catalytic subunit;	6e-10
1t4h_A	290	Serine/threonine-protein kinase WNK1; protein seri	7e-10
3uc3_A	361	Serine/threonine-protein kinase SRK2I; SNRK2, ABA	1e-09
3m2w_A	299	MAP kinase-activated protein kinase 2; small molec	1e-09
3m2w_A	299	MAP kinase-activated protein kinase 2; small molec	2e-04
3g51_A	325	Ribosomal protein S6 kinase alpha-3; N-terminal ki	2e-09
3a62_A	327	Ribosomal protein S6 kinase beta-1; kinase domain,	2e-09
4fr4_A	384	YANK1, serine/threonine-protein kinase 32A; struct	3e-09
3a8x_A	345	Protein kinase C IOTA type; transferase; HET: TPO;	4e-09
3fxz_A	297	Serine/threonine-protein kinase PAK 1; transferase	5e-09
4dc2_A	396	Protein kinase C IOTA type; kinase, substrate, cel	5e-09
1o6l_A	337	RAC-beta serine/threonine protein kinase; protein	5e-09
2h34_A	309	Serine/threonine-protein kinase PKNE; apoenzyme, t	7e-09
2c30_A	321	Serine/threonine-protein kinase PAK 6; CRIB domain	8e-09
1vzo_A	355	Ribosomal protein S6 kinase alpha 5; protein kinas	8e-09
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	1e-08
4ejn_A	446	RAC-alpha serine/threonine-protein kinase; AKT1, a	1e-08
1xjd_A	345	Protein kinase C, theta type; PKC-theta, ATP, AMP,	1e-08
3pfq_A	674	PKC-B, PKC-beta, protein kinase C beta type; phosp	2e-08
1rdq_E	350	PKA C-alpha, CAMP-dependent protein kinase, alpha-	2e-08
3com_A	314	Serine/threonine-protein kinase 4; MST1, STE20-lik	3e-08
3a7i_A	303	MST3 kinase, serine/threonine kinase 24 (STE20 hom	3e-08
3ork_A	311	Serine/threonine protein kinase; structural genomi	3e-08
4eqm_A	294	Protein kinase; transferase; HET: ANP; 3.00A {Stap	3e-08
2i0e_A	353	Protein kinase C-beta II; serine/threonine protein	3e-08
3txo_A	353	PKC-L, NPKC-ETA, protein kinase C ETA type; phosph	3e-08
2r5t_A	373	Serine/threonine-protein kinase SGK1; AGC protein	6e-08
1b6c_B	342	TGF-B superfamily receptor type I; complex (isomer	7e-08
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	1e-07
3an0_A	340	Dual specificity mitogen-activated protein kinase;	1e-07
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	2e-07
2dyl_A	318	Dual specificity mitogen-activated protein kinase	2e-07
1fot_A	318	TPK1 delta, CAMP-dependent protein kinase type 1;	2e-07
3gxj_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	3e-07
3fme_A	290	Dual specificity mitogen-activated protein kinase;	3e-07
3q4u_A	301	Activin receptor type-1; structural genomics conso	7e-07
3s95_A	310	LIMK-1, LIM domain kinase 1; structural genomics,	8e-07
3mdy_A	337	Bone morphogenetic protein receptor type-1B; compl	1e-06
3aln_A	327	Dual specificity mitogen-activated protein kinase;	1e-06
3soc_A	322	Activin receptor type-2A; structural genomics cons	1e-06
2vwi_A	303	Serine/threonine-protein kinase OSR1; STE kinase,	1e-06
3kmu_A	271	ILK, integrin-linked kinase; cell adhesion, ANK re	1e-06
2y4i_B	319	KSR2, HKSR2, kinase suppressor of RAS 2; transfera	2e-06
2x7f_A	326	TRAF2 and NCK-interacting protein kinase; serine/t	2e-06
1u5q_A	348	Serine/threonine protein kinase TAO2; transferase;	3e-06
2j7t_A	302	Serine/threonine-protein kinase 10; transferase, A	3e-06
3g2f_A	336	Bone morphogenetic protein receptor type-2; kinase	1e-05
2nru_A	307	Interleukin-1 receptor-associated kinase 4; inhibi	4e-04

>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A* Length = 339

 Score =  280 bits (718), Expect = 2e-94
 Identities = 97/245 (39%), Positives = 135/245 (55%), Gaps = 42/245 (17%)

Query: 3   AVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGS 62
             +H   + HTDLKPEN+L V S+Y +  + K            +R   +  IKV+DFGS
Sbjct: 132 NFLHSNKLTHTDLKPENILFVQSDYTEAYNPKIKRD--------ERTLINPDIKVVDFGS 183

Query: 63  TTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHL 122
            TY+    + +VSTRHYRAPEVIL LGW+ PCD+WS+GCIL+E   G  +F TH++ EHL
Sbjct: 184 ATYDDEHHSTLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTHDSKEHL 243

Query: 123 AMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVPFFYGS 182
           AMMER+LGPLP+HM+++  +   KY    RLDW E +++   +    K  +         
Sbjct: 244 AMMERILGPLPKHMIQKTRKR--KYFHHDRLDWDEHSSAGRYVSRACKPLK--------- 292

Query: 183 FVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRH 242
                                + ++ Q V+H    L  L+Q +L YDP  R+T REAL+H
Sbjct: 293 ---------------------EFMLSQDVEHER--LFDLIQKMLEYDPAKRITLREALKH 329

Query: 243 PFFTR 247
           PFF  
Sbjct: 330 PFFDL 334

>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7} Length = 360

 Score =  274 bits (704), Expect = 3e-92
 Identities = 88/246 (35%), Positives = 121/246 (49%), Gaps = 40/246 (16%)

Query: 3   AVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGS 62
             +  + + HTDLKPEN+LL    + K       +   K         KS+ IK+IDFG 
Sbjct: 151 NYLRKMSLTHTDLKPENILLDDPYFEKSLITVRRVTDGKKIQI--YRTKSTGIKLIDFGC 208

Query: 63  TTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHL 122
            T++      I++TR YRAPEVIL LGW    D+WS GC+L EL TG  LF+THE++EHL
Sbjct: 209 ATFKSDYHGSIINTRQYRAPEVILNLGWDVSSDMWSFGCVLAELYTGSLLFRTHEHMEHL 268

Query: 123 AMMERVLGPLPQHMLKRVDR-HAEKYVRRG--RLDWPEGAASRESIKSVMKLPRLQVPFF 179
           AMME ++ P+P++ML    + +  KYV +   +L WPE A+S  SIK V K   L     
Sbjct: 269 AMMESIIQPIPKNMLYEATKTNGSKYVNKDELKLAWPENASSINSIKHVKKCLPLYKIIK 328

Query: 180 YGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREA 239
           +  F +F                                   L  +L+ DPT R +  E 
Sbjct: 329 HELFCDF-----------------------------------LYSILQIDPTLRPSPAEL 353

Query: 240 LRHPFF 245
           L+H F 
Sbjct: 354 LKHKFL 359

>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A* Length = 355

 Score =  268 bits (688), Expect = 7e-90
 Identities = 91/245 (37%), Positives = 129/245 (52%), Gaps = 42/245 (17%)

Query: 3   AVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGS 62
             +H+  + HTDLKPEN+L V+SE+  + +   S          ++  K+++I+V DFGS
Sbjct: 137 RFLHENQLTHTDLKPENILFVNSEFETLYNEHKSCE--------EKSVKNTSIRVADFGS 188

Query: 63  TTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHL 122
            T++      IV+TRHYR PEVIL LGW  PCD+WS+GCIL E   G  LFQTHEN EHL
Sbjct: 189 ATFDHEHHTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTHENREHL 248

Query: 123 AMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVPFFYGS 182
            MME++LGP+P HM+ R  +   KY  +G L W E ++    +K   K  +         
Sbjct: 249 VMMEKILGPIPSHMIHRTRKQ--KYFYKGGLVWDENSSDGRYVKENCKPLK--------- 297

Query: 183 FVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRH 242
                                  ++   ++H    L  L++ +L +DP  R+T  EAL H
Sbjct: 298 ---------------------SYMLQDSLEHV--QLFDLMRRMLEFDPAQRITLAEALLH 334

Query: 243 PFFTR 247
           PFF  
Sbjct: 335 PFFAG 339

>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* Length = 429

 Score =  224 bits (573), Expect = 1e-71
 Identities = 72/245 (29%), Positives = 96/245 (39%), Gaps = 44/245 (17%)

Query: 3   AVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGS 62
             +H   +IH DLKPEN+LL                              S IKVIDFGS
Sbjct: 214 DALHKNRIIHCDLKPENILLKQ-------------------------QGRSGIKVIDFGS 248

Query: 63  TTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHL 122
           + YE       + +R YRAPEVILG  +  P D+WS+GCIL EL TG  L    +  + L
Sbjct: 249 SCYEHQRVYTYIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPGEDEGDQL 308

Query: 123 AMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVPFFYGS 182
           A M  +LG   Q +L    R       +G   +       +                 GS
Sbjct: 309 ACMIELLGMPSQKLLDASKRAKNFVSSKGYPRYCTVTTLSD-----------------GS 351

Query: 183 FVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRH 242
            V   G     +      S      ++  D         L+  L +DP  R+T  +ALRH
Sbjct: 352 VVLNGGRSRRGKLRGPPESREWGNALKGCDDPL--FLDFLKQCLEWDPAVRMTPGQALRH 409

Query: 243 PFFTR 247
           P+  R
Sbjct: 410 PWLRR 414

>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A* Length = 382

 Score =  222 bits (567), Expect = 3e-71
 Identities = 66/245 (26%), Positives = 100/245 (40%), Gaps = 45/245 (18%)

Query: 6   HDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTY 65
            +L +IH DLKPEN+LL +                         PK SAIK++DFGS+  
Sbjct: 176 PELSIIHCDLKPENILLCN-------------------------PKRSAIKIVDFGSSCQ 210

Query: 66  ERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMM 125
                   + +R YR+PEV+LG+ +    D+WS+GCILVE+ TGE LF     ++ +  +
Sbjct: 211 LGQRIYQYIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGANEVDQMNKI 270

Query: 126 ERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVPFFYGSFVE 185
             VLG  P H+L +  +  + + +     W       +  K   K P  +          
Sbjct: 271 VEVLGIPPAHILDQAPKARKFFEKLPDGTWNLK--KTKDGKREYKPPGTRKL-------- 320

Query: 186 FKGYCLAFRCTDCIASFCQNLIMQHVDHSAGD---LTHLLQGLLRYDPTDRLTAREALRH 242
                                      H+  D      L+  +L YDP  R+    AL+H
Sbjct: 321 -------HNILGVETGGPGGRRAGESGHTVADYLKFKDLILRMLDYDPKTRIQPYYALQH 373

Query: 243 PFFTR 247
            FF +
Sbjct: 374 SFFKK 378

>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A Length = 373

 Score =  205 bits (524), Expect = 6e-65
 Identities = 62/252 (24%), Positives = 97/252 (38%), Gaps = 64/252 (25%)

Query: 3   AVMHDLC-MIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG 61
             MH  C +IHTD+KPENVL+   +  +                         IK+ D G
Sbjct: 145 DYMHRRCGIIHTDIKPENVLMEIVDSPE---------------------NLIQIKIADLG 183

Query: 62  STTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHE---- 117
           +  +        + TR YR+PEV+LG  W    DIWS  C++ EL TG+ LF+  E    
Sbjct: 184 NACWYDEHYTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSY 243

Query: 118 --NLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQ 175
             + +H+A +  +LG LP ++L+        +  RG L             S +K   L+
Sbjct: 244 TKDDDHIAQIIELLGELPSYLLRNGKYTRTFFNSRGLLRN----------ISKLKFWPLE 293

Query: 176 VPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLT 235
                                D +         +     A +++  L  +L+ DP  R  
Sbjct: 294 ---------------------DVLTEK-----YKFSKDEAKEISDFLSPMLQLDPRKRAD 327

Query: 236 AREALRHPFFTR 247
           A   + HP+   
Sbjct: 328 AGGLVNHPWLKD 339

>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A* Length = 397

 Score =  175 bits (446), Expect = 4e-53
 Identities = 62/273 (22%), Positives = 104/273 (38%), Gaps = 71/273 (26%)

Query: 5   MHDLC-MIHTDLKPENVLLVSSEY----------------------IKVPDYKSSLHTPK 41
           +H  C +IHTD+KPEN+LL  +E                         V    ++     
Sbjct: 162 LHTKCRIIHTDIKPENILLSVNEQYIRRLAAEATEWQRSGAPPPSGSAVSTAPATAGNFL 221

Query: 42  DSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGC 101
            +    +  +   +K+ D G+  +        + TR YR+ EV++G G+  P DIWS  C
Sbjct: 222 VNPLEPKNAEKLKVKIADLGNACWVHKHFTEDIQTRQYRSLEVLIGSGYNTPADIWSTAC 281

Query: 102 ILVELCTGEALFQTHENLE------HLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDW 155
           +  EL TG+ LF+ H   E      H+A++  +LG +P+ ++       E + ++G L  
Sbjct: 282 MAFELATGDYLFEPHSGEEYTRDEDHIALIIELLGKVPRKLIVAGKYSKEFFTKKGDLKH 341

Query: 156 PEGAASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSA 215
                        +K   L                               ++++  + S 
Sbjct: 342 ITK----------LKPWGL-----------------------------FEVLVEKYEWSQ 362

Query: 216 GD---LTHLLQGLLRYDPTDRLTAREALRHPFF 245
            +    T  L  +L   P  R TA E LRHP+ 
Sbjct: 363 EEAAGFTDFLLPMLELIPEKRATAAECLRHPWL 395

>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis} Length = 394

 Score =  116 bits (292), Expect = 1e-30
 Identities = 67/255 (26%), Positives = 101/255 (39%), Gaps = 86/255 (33%)

Query: 3   AVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGS 62
           A +H + + H D+KP+N+LL                           P S  +K+IDFGS
Sbjct: 155 AYIHSIGICHRDIKPQNLLL--------------------------DPPSGVLKLIDFGS 188

Query: 63  TTYERPDQNYI--VSTRHYRAPEVILGLGWTY---PCDIWSVGCILVELCTGEALFQTHE 117
                  +  +  + +R+YRAPE+I G   T      DIWS GC++ EL  G+ LF    
Sbjct: 189 AKILIAGEPNVSYICSRYYRAPELIFG--ATNYTTNIDIWSTGCVMAELMQGQPLFPGES 246

Query: 118 NLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQ-V 176
            ++ L  + +VLG   +  +K ++ +  ++                      K P+++  
Sbjct: 247 GIDQLVEIIKVLGTPSREQIKTMNPNYMEH----------------------KFPQIRPH 284

Query: 177 PFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTA 236
           PF                           +        A D   L+  LL Y P+ RLTA
Sbjct: 285 PF-------------------------SKVFRPRTPPDAID---LISRLLEYTPSARLTA 316

Query: 237 REALRHPFFTRDHLR 251
            EAL HPFF  D LR
Sbjct: 317 IEALCHPFF--DELR 329

>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} Length = 331

 Score =  115 bits (289), Expect = 1e-30
 Identities = 60/253 (23%), Positives = 86/253 (33%), Gaps = 82/253 (32%)

Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG-ST 63
            H   +IH D+KPEN +LVS                          +S  +K+ DFG + 
Sbjct: 140 CHSHNIIHRDIKPEN-ILVS--------------------------QSGVVKLCDFGFAR 172

Query: 64  TYERPDQNY--IVSTRHYRAPEVILGLGWTY--PCDIWSVGCILVELCTGEALFQTHENL 119
           T   P + Y   V+TR YRAPE+++G    Y    D+W++GC++ E+  GE LF    ++
Sbjct: 173 TLAAPGEVYDDEVATRWYRAPELLVG-DVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDI 231

Query: 120 EHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVPFF 179
           + L  +   LG L                                     K P       
Sbjct: 232 DQLYHIMMCLGNLIPR------------------HQEL----------FNKNP------- 256

Query: 180 YGSFVEFKGYCL-AFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTARE 238
                 F G  L   +  + +      L          D   L +  L  DP  R    E
Sbjct: 257 -----VFAGVRLPEIKEREPLERRYPKL-----SEVVID---LAKKCLHIDPDKRPFCAE 303

Query: 239 ALRHPFFTRDHLR 251
            L H FF  D   
Sbjct: 304 LLHHDFFQMDGFA 316

>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens} Length = 311

 Score =  112 bits (283), Expect = 7e-30
 Identities = 59/253 (23%), Positives = 93/253 (36%), Gaps = 84/253 (33%)

Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG-ST 63
            H    IH D+KPEN +L++                          K S IK+ DFG + 
Sbjct: 118 CHKHNCIHRDVKPEN-ILIT--------------------------KHSVIKLCDFGFAR 150

Query: 64  TYERPDQNY--IVSTRHYRAPEVILGLGWTY--PCDIWSVGCILVELCTGEALFQTHENL 119
               P   Y   V+TR YR+PE+++G    Y  P D+W++GC+  EL +G  L+    ++
Sbjct: 151 LLTGPSDYYDDEVATRWYRSPELLVG-DTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDV 209

Query: 120 EHLAMMERVLG-PLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVPF 178
           + L ++ + LG  +P+H                                           
Sbjct: 210 DQLYLIRKTLGDLIPRH-------------------QQV----------FSTNQ------ 234

Query: 179 FYGSFVEFKGYCL-AFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAR 237
                  F G  +      + +     N+      + A     LL+G L  DPT+RLT  
Sbjct: 235 ------YFSGVKIPDPEDMEPLELKFPNI-----SYPALG---LLKGCLHMDPTERLTCE 280

Query: 238 EALRHPFFTRDHL 250
           + L HP+F     
Sbjct: 281 QLLHHPYFENIRE 293

>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ... Length = 420

 Score =  112 bits (283), Expect = 3e-29
 Identities = 60/253 (23%), Positives = 97/253 (38%), Gaps = 82/253 (32%)

Query: 3   AVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGS 62
           A +H   + H D+KP+N+LL                   D       P ++ +K+ DFGS
Sbjct: 170 AYIHSFGICHRDIKPQNLLL-------------------D-------PDTAVLKLCDFGS 203

Query: 63  TTYERPDQNYI--VSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHENL 119
                  +  +  + +R+YRAPE+I G   +T   D+WS GC+L EL  G+ +F     +
Sbjct: 204 AKQLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGV 263

Query: 120 EHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQ-VPF 178
           + L  + +VLG   +  ++ ++ +  ++                      K P+++  P+
Sbjct: 264 DQLVEIIKVLGTPTREQIREMNPNYTEF----------------------KFPQIKAHPW 301

Query: 179 FYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTARE 238
                                      +        A     L   LL Y PT RLT  E
Sbjct: 302 -------------------------TKVFRPRTPPEAIA---LCSRLLEYTPTARLTPLE 333

Query: 239 ALRHPFFTRDHLR 251
           A  H FF  D LR
Sbjct: 334 ACAHSFF--DELR 344

>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A* Length = 329

 Score =  110 bits (277), Expect = 7e-29
 Identities = 61/248 (24%), Positives = 93/248 (37%), Gaps = 78/248 (31%)

Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG-ST 63
            H    +H DLKP+N LL+S                          ++  +K+ DFG + 
Sbjct: 148 CHSRRCLHRDLKPQN-LLLSVS---------------------DASETPVLKIGDFGLAR 185

Query: 64  TYERPDQNY--IVSTRHYRAPEVILGLGWTY--PCDIWSVGCILVELCTGEALFQTHENL 119
            +  P + +   + T  YR PE++LG    Y    DIWS+ CI  E+     LF     +
Sbjct: 186 AFGIPIRQFTHEIITLWYRPPEILLG-SRHYSTSVDIWSIACIWAEMLMKTPLFPGDSEI 244

Query: 120 EHLAMMERVLG-PLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVPF 178
           + L  +  VLG P                       WP           V  L     P 
Sbjct: 245 DQLFKIFEVLGLPDDT-------------------TWPG----------VTAL-----PD 270

Query: 179 FYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTARE 238
           +  SF +F+G  L            + ++   +D    D   LL  +L  DP  R++A+ 
Sbjct: 271 WKQSFPKFRGKTL------------KRVLGALLDDEGLD---LLTAMLEMDPVKRISAKN 315

Query: 239 ALRHPFFT 246
           AL HP+F+
Sbjct: 316 ALEHPYFS 323

>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3mb7_A* 3mb6_A* 3owj_A* 3owk_A* ... Length = 330

 Score =  110 bits (276), Expect = 1e-28
 Identities = 56/249 (22%), Positives = 95/249 (38%), Gaps = 71/249 (28%)

Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
            H + ++H D+KP NV++                   D  + K       +++ID+G   
Sbjct: 146 CHSMGIMHRDVKPHNVMI-------------------DHEHRK-------LRLIDWGLAE 179

Query: 65  YERPDQNYI--VSTRHYRAPEVILGL-GWTYPCDIWSVGCILVELCTG-EALFQTHENLE 120
           +  P Q Y   V++R+++ PE+++    + Y  D+WS+GC+L  +    E  F  H+N +
Sbjct: 180 FYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYD 239

Query: 121 HLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVPFFY 180
            L  + +VLG                Y+ +  ++             + +  R    +  
Sbjct: 240 QLVRIAKVLGT-ED---------LYDYIDKYNIELD-----PRFNDILGRHSR--KRW-- 280

Query: 181 GSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREAL 240
                                F  +     V   A D    L  LLRYD   RLTAREA+
Sbjct: 281 -------------------ERFVHSENQHLVSPEALD---FLDKLLRYDHQSRLTAREAM 318

Query: 241 RHPFFTRDH 249
            HP+F    
Sbjct: 319 EHPYFYTVV 327

>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens} Length = 308

 Score =  109 bits (274), Expect = 2e-28
 Identities = 58/248 (23%), Positives = 90/248 (36%), Gaps = 84/248 (33%)

Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG-ST 63
           +H  C++H DLKPEN +LV+S                             +K+ DFG + 
Sbjct: 136 LHANCIVHRDLKPEN-ILVTSG--------------------------GTVKLADFGLAR 168

Query: 64  TYERPDQNY--IVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEH 121
            Y         +V T  YRAPEV+L   +  P D+WSVGCI  E+   + LF  +   + 
Sbjct: 169 IYSYQ-MALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQ 227

Query: 122 LAMMERVLG-PLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVPFFY 180
           L  +  ++G P                      DWP            + LPR       
Sbjct: 228 LGKIFDLIGLPPED-------------------DWPR----------DVSLPRG------ 252

Query: 181 GSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREAL 240
            +F       +                   ++ S      LL  +L ++P  R++A  AL
Sbjct: 253 -AFPPRGPRPVQSVVP-------------EMEESGAQ---LLLEMLTFNPHKRISAFRAL 295

Query: 241 RHPFFTRD 248
           +H +  +D
Sbjct: 296 QHSYLHKD 303

>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A Length = 288

 Score =  107 bits (270), Expect = 4e-28
 Identities = 63/248 (25%), Positives = 95/248 (38%), Gaps = 84/248 (33%)

Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG-ST 63
            HD  ++H DLKP+N LL++ E                            +K+ DFG + 
Sbjct: 116 CHDRRVLHRDLKPQN-LLINRE--------------------------GELKIADFGLAR 148

Query: 64  TYERPDQNY--IVSTRHYRAPEVILGLGWTY--PCDIWSVGCILVELCTGEALFQTHENL 119
            +  P + Y   + T  YRAP+V++G    Y    DIWSVGCI  E+  G  LF      
Sbjct: 149 AFGIPVRKYTHEIVTLWYRAPDVLMG-SKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEA 207

Query: 120 EHLAMMERVLG-PLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVPF 178
           + L  + R+LG P  +                   +WP           V +L     P 
Sbjct: 208 DQLMRIFRILGTPNSK-------------------NWPN----------VTEL-----PK 233

Query: 179 FYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTARE 238
           +  +F  ++                       +D S  D   LL  +L+ DP  R+TA++
Sbjct: 234 YDPNFTVYEPLPWESFLK-------------GLDESGID---LLSKMLKLDPNQRITAKQ 277

Query: 239 ALRHPFFT 246
           AL H +F 
Sbjct: 278 ALEHAYFK 285

>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II} Length = 388

 Score =  109 bits (273), Expect = 5e-28
 Identities = 54/252 (21%), Positives = 96/252 (38%), Gaps = 47/252 (18%)

Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDY-----KSSLHTPKDSSYFKRMPKSSAIKVID 59
           +H   ++H D+KP N+LL +  ++KV D+       ++    ++        +       
Sbjct: 125 LHSGGLLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNIPLSINENTENFDDDQ 184

Query: 60  FGSTTYERPDQNYIVSTRHYRAPEVILGL-GWTYPCDIWSVGCILVELCTGEALFQTHEN 118
              T Y        V+TR YRAPE++LG   +T   D+WS+GCIL E+  G+ +F     
Sbjct: 185 PILTDY--------VATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGSST 236

Query: 119 LEHLAMMERVLGPLPQHMLKRVD-RHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVP 177
           +  L  +  V+       ++ +    A+  +                      L      
Sbjct: 237 MNQLERIIGVIDFPSNEDVESIQSPFAKTMIES--------------------LKEKVEI 276

Query: 178 FFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAR 237
                   F  +              +       +  A D   LL  LL+++P  R++A 
Sbjct: 277 RQSNKRDIFTKWKNLLL---------KINPKADCNEEALD---LLDKLLQFNPNKRISAN 324

Query: 238 EALRHPFFTRDH 249
           +AL+HPF +  H
Sbjct: 325 DALKHPFVSIFH 336

>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens} Length = 320

 Score =  107 bits (270), Expect = 5e-28
 Identities = 49/252 (19%), Positives = 89/252 (35%), Gaps = 81/252 (32%)

Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG--- 61
           +H   ++H DLKP N+ + + +                            +K+ DFG   
Sbjct: 136 IHSANVLHRDLKPANLFINTEDL--------------------------VLKIGDFGLAR 169

Query: 62  STTYERPDQNYI---VSTRHYRAPEVILGL-GWTYPCDIWSVGCILVELCTGEALFQTHE 117
                   + ++   + T+ YR+P ++L    +T   D+W+ GCI  E+ TG+ LF    
Sbjct: 170 IMDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAH 229

Query: 118 NLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVP 177
            LE + ++   +  + +   + +      Y                 I++ M  P    P
Sbjct: 230 ELEQMQLILESIPVVHEEDRQELLSVIPVY-----------------IRNDMTEPH--KP 270

Query: 178 FFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAR 237
                                        ++  +   A D    L+ +L + P DRLTA 
Sbjct: 271 L--------------------------TQLLPGISREAVD---FLEQILTFSPMDRLTAE 301

Query: 238 EALRHPFFTRDH 249
           EAL HP+ +   
Sbjct: 302 EALSHPYMSIYS 313

>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A* Length = 464

 Score =  109 bits (274), Expect = 7e-28
 Identities = 58/248 (23%), Positives = 90/248 (36%), Gaps = 67/248 (27%)

Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           +H   +IH DLKP N+++ S                              +K++DFG   
Sbjct: 180 LHSAGIIHRDLKPSNIVVKSD---------------------------CTLKILDFGLAR 212

Query: 65  YERPDQN---YIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEH 121
                     Y V TR+YRAPEVILG+G+    DIWSVGCI+ E+   + LF   + ++ 
Sbjct: 213 TAGTSFMMTPY-VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQ 271

Query: 122 LAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVPFFYG 181
              +   LG      +K++      YV                       P+     F  
Sbjct: 272 WNKVIEQLGTPCPEFMKKLQPTVRNYVEN--------------------RPKYAGLTFPK 311

Query: 182 SFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALR 241
            F +                   +   +     A D   LL  +L  DP  R++  +AL+
Sbjct: 312 LFPDSLFPAD-------------SEHNKLKASQARD---LLSKMLVIDPAKRISVDDALQ 355

Query: 242 HPFFTRDH 249
           HP+    +
Sbjct: 356 HPYINVWY 363

>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B Length = 326

 Score =  106 bits (268), Expect = 1e-27
 Identities = 61/246 (24%), Positives = 92/246 (37%), Gaps = 84/246 (34%)

Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG-ST 63
           +H   ++H DLKP+N +LV+S                             IK+ DFG + 
Sbjct: 136 LHSHRVVHRDLKPQN-ILVTSS--------------------------GQIKLADFGLAR 168

Query: 64  TYERPDQNY--IVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEH 121
            Y         +V T  YRAPEV+L   +  P D+WSVGCI  E+   + LF+   +++ 
Sbjct: 169 IYSFQ-MALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQ 227

Query: 122 LAMMERVLG-PLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVPFFY 180
           L  +  V+G P  +                   DWP            + LPR       
Sbjct: 228 LGKILDVIGLPGEE-------------------DWPR----------DVALPRQ------ 252

Query: 181 GSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREAL 240
            +F       +          F  ++     D    D   LL   L ++P  R++A  AL
Sbjct: 253 -AFHSKSAQPI--------EKFVTDI-----DELGKD---LLLKCLTFNPAKRISAYSAL 295

Query: 241 RHPFFT 246
            HP+F 
Sbjct: 296 SHPYFQ 301

>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} PDB: 2qkr_A* Length = 311

 Score =  106 bits (266), Expect = 2e-27
 Identities = 63/248 (25%), Positives = 98/248 (39%), Gaps = 83/248 (33%)

Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG-ST 63
            H   ++H DLKP+N LL++S+                           A+K+ DFG + 
Sbjct: 135 CHQHRILHRDLKPQN-LLINSD--------------------------GALKLADFGLAR 167

Query: 64  TYERPDQNY--IVSTRHYRAPEVILGLGWTY--PCDIWSVGCILVELCTGEALFQTHENL 119
            +  P ++Y   V T  YRAP+V++G    Y    DIWS+GCI  E+ TG+ LF    + 
Sbjct: 168 AFGIPVRSYTHEVVTLWYRAPDVLMG-SKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDD 226

Query: 120 EHLAMMERVLG-PLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVPF 178
           + L  +  +LG P P+                   +WP+          V +LP      
Sbjct: 227 DQLPKIFSILGTPNPR-------------------EWPQ----------VQELP------ 251

Query: 179 FYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTARE 238
                  +K            +S               D   LL  +L +DP  R++AR+
Sbjct: 252 ------LWKQRTFQVFEKKPWSSIIPGF-----CQEGID---LLSNMLCFDPNKRISARD 297

Query: 239 ALRHPFFT 246
           A+ HP+F 
Sbjct: 298 AMNHPYFK 305

>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ... Length = 371

 Score =  107 bits (268), Expect = 2e-27
 Identities = 62/245 (25%), Positives = 96/245 (39%), Gaps = 61/245 (24%)

Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           +H   +IH DLKP N+++ S   +K+ D+   L     +S+                 T 
Sbjct: 143 LHSAGIIHRDLKPSNIVVKSDCTLKILDF--GLARTAGTSFM---------------MTP 185

Query: 65  YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAM 124
           Y        V TR+YRAPEVILG+G+    DIWSVGCI+ E+  G  LF   ++++    
Sbjct: 186 Y--------VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNK 237

Query: 125 MERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVPFFYGSFV 184
           +   LG      +K++      YV                       P+        SF 
Sbjct: 238 VIEQLGTPCPEFMKKLQPTVRTYVEN--------------------RPKYAGY----SFE 273

Query: 185 EFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPF 244
           +       F      A    +   +     A D   LL  +L  D + R++  EAL+HP+
Sbjct: 274 KL------FPDVLFPAD---SEHNKLKASQARD---LLSKMLVIDASKRISVDEALQHPY 321

Query: 245 FTRDH 249
               +
Sbjct: 322 INVWY 326

>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A* Length = 317

 Score =  106 bits (266), Expect = 2e-27
 Identities = 64/248 (25%), Positives = 97/248 (39%), Gaps = 79/248 (31%)

Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG-ST 63
            H+  ++H DLKP+N LL++                          K   +K+ DFG + 
Sbjct: 124 CHENKILHRDLKPQN-LLIN--------------------------KRGQLKLGDFGLAR 156

Query: 64  TYERPDQNY--IVSTRHYRAPEVILGLGWTY--PCDIWSVGCILVELCTGEALFQTHENL 119
            +  P   +   V T  YRAP+V++G   TY    DIWS GCIL E+ TG+ LF    + 
Sbjct: 157 AFGIPVNTFSSEVVTLWYRAPDVLMG-SRTYSTSIDIWSCGCILAEMITGKPLFPGTNDE 215

Query: 120 EHLAMMERVLG-PLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVPF 178
           E L ++  ++G P                       WP           V KLP+     
Sbjct: 216 EQLKLIFDIMGTPNES-------------------LWPS----------VTKLPKYNPNI 246

Query: 179 FYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTARE 238
                 + +                Q    + +D +  D    L GLL+ +P  RL+A++
Sbjct: 247 QQRPPRDLR-------------QVLQPHTKEPLDGNLMD---FLHGLLQLNPDMRLSAKQ 290

Query: 239 ALRHPFFT 246
           AL HP+F 
Sbjct: 291 ALHHPWFA 298

>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7 Length = 346

 Score =  106 bits (266), Expect = 3e-27
 Identities = 60/248 (24%), Positives = 91/248 (36%), Gaps = 85/248 (34%)

Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG-ST 63
           +H   ++H DLKP N LL+                               +K+ DFG + 
Sbjct: 128 LHQHWILHRDLKPNN-LLLDEN--------------------------GVLKLADFGLAK 160

Query: 64  TYERPDQNY--IVSTRHYRAPEVILGLGWTY--PCDIWSVGCILVELCTGEALFQTHENL 119
           ++  P++ Y   V TR YRAPE++ G    Y    D+W+VGCIL EL           +L
Sbjct: 161 SFGSPNRAYTHQVVTRWYRAPELLFG-ARMYGVGVDMWAVGCILAELLLRVPFLPGDSDL 219

Query: 120 EHLAMMERVLG-PLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVPF 178
           + L  +   LG P  +                    WP+          +  LP      
Sbjct: 220 DQLTRIFETLGTPTEE-------------------QWPD----------MCSLP------ 244

Query: 179 FYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTARE 238
            Y +F  F G  L    +                    D   L+QGL  ++P  R+TA +
Sbjct: 245 DYVTFKSFPGIPLHHIFSA-------------AGDDLLD---LIQGLFLFNPCARITATQ 288

Query: 239 ALRHPFFT 246
           AL+  +F+
Sbjct: 289 ALKMKYFS 296

>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major} Length = 360

 Score =  105 bits (264), Expect = 7e-27
 Identities = 62/244 (25%), Positives = 91/244 (37%), Gaps = 77/244 (31%)

Query: 11  IHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ 70
            H D+KP NVL+                   +            +K+ DFGS     P +
Sbjct: 153 CHRDIKPHNVLV-------------------N-------EADGTLKLCDFGSAKKLSPSE 186

Query: 71  NYI--VSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMER 127
             +  + +R+YRAPE+I G   +T   DIWSVGCI  E+  GE +F+   +   L  + R
Sbjct: 187 PNVAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSAGQLHEIVR 246

Query: 128 VLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVPFFYGSFVEFK 187
           VLG  P                           SRE ++  +      V  +    + + 
Sbjct: 247 VLGC-P---------------------------SREVLRK-LNPSHTDVDLYNSKGIPW- 276

Query: 188 GYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTR 247
                            N+   H    A +   LL  LL+Y P +R+   EAL HP+F  
Sbjct: 277 ----------------SNVFSDHSLKDAKEAYDLLSALLQYLPEERMKPYEALCHPYF-- 318

Query: 248 DHLR 251
           D L 
Sbjct: 319 DELH 322

>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A Length = 292

 Score =  103 bits (260), Expect = 1e-26
 Identities = 60/251 (23%), Positives = 96/251 (38%), Gaps = 89/251 (35%)

Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG-ST 63
            H   ++H DLKP+N LL++                              +K+ +FG + 
Sbjct: 117 CHSRNVLHRDLKPQN-LLINRN--------------------------GELKLANFGLAR 149

Query: 64  TYERPDQNY--IVSTRHYRAPEVILGLGWTY--PCDIWSVGCILVELCT-GEALFQTHEN 118
            +  P + Y   V T  YR P+V+ G    Y    D+WS GCI  EL   G  LF  ++ 
Sbjct: 150 AFGIPVRCYSAEVVTLWYRPPDVLFG-AKLYSTSIDMWSAGCIFAELANAGRPLFPGNDV 208

Query: 119 LEHLAMMERVLG-PLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVP 177
            + L  + R+LG P  +                    WP           + KLP     
Sbjct: 209 DDQLKRIFRLLGTPTEE-------------------QWPS----------MTKLP----- 234

Query: 178 FFYGSFVEFKGYCLAFRCTDCIASFCQNL--IMQHVDHSAGDLTHLLQGLLRYDPTDRLT 235
             Y  +  +                  +L  ++  ++ +  D   LLQ LL+ +P  R++
Sbjct: 235 -DYKPYPMYPAT--------------TSLVNVVPKLNATGRD---LLQNLLKCNPVQRIS 276

Query: 236 AREALRHPFFT 246
           A EAL+HP+F+
Sbjct: 277 AEEALQHPYFS 287

>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens} Length = 405

 Score =  105 bits (264), Expect = 1e-26
 Identities = 62/262 (23%), Positives = 94/262 (35%), Gaps = 83/262 (31%)

Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG-ST 63
           +H   ++H DLKP N +LV  E                       P+   +K+ D G + 
Sbjct: 144 LHANWVLHRDLKPAN-ILVMGEG----------------------PERGRVKIADMGFAR 180

Query: 64  TYERPDQNY-----IVSTRHYRAPEVILGLGWTY--PCDIWSVGCILVELCTGEALFQ-- 114
            +  P +       +V T  YRAPE++LG    Y    DIW++GCI  EL T E +F   
Sbjct: 181 LFNSPLKPLADLDPVVVTFWYRAPELLLG-ARHYTKAIDIWAIGCIFAELLTSEPIFHCR 239

Query: 115 -------THENLEHLAMMERVLG-PLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIK 166
                     + + L  +  V+G P  +                   DW +         
Sbjct: 240 QEDIKTSNPYHHDQLDRIFNVMGFPADK-------------------DWED--------- 271

Query: 167 SVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLL 226
            + K+P            E       FR            + +H         HLLQ LL
Sbjct: 272 -IKKMP------------EHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLL 318

Query: 227 RYDPTDRLTAREALRHPFFTRD 248
             DP  R+T+ +A++ P+F  D
Sbjct: 319 TMDPIKRITSEQAMQDPYFLED 340

>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens} Length = 324

 Score =  103 bits (259), Expect = 3e-26
 Identities = 57/248 (22%), Positives = 92/248 (37%), Gaps = 83/248 (33%)

Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG-ST 63
            H   ++H DLKP+N LL++                          +   +K+ DFG + 
Sbjct: 116 CHRQKVLHRDLKPQN-LLIN--------------------------ERGELKLADFGLAR 148

Query: 64  TYERPDQNY--IVSTRHYRAPEVILGLGWTY--PCDIWSVGCILVELCTGEALFQTHENL 119
               P + Y   V T  YR P+++LG    Y    D+W VGCI  E+ TG  LF      
Sbjct: 149 AKSIPTKTYDNEVVTLWYRPPDILLG-STDYSTQIDMWGVGCIFYEMATGRPLFPGSTVE 207

Query: 120 EHLAMMERVLG-PLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVPF 178
           E L  + R+LG P  +                    WP           ++        F
Sbjct: 208 EQLHFIFRILGTPTEE-------------------TWPG----------ILSNEE----F 234

Query: 179 FYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTARE 238
              ++ +++   L                   +D    D   LL  LL+++  +R++A +
Sbjct: 235 KTYNYPKYRAEALLSHAP-------------RLDSDGAD---LLTKLLQFEGRNRISAED 278

Query: 239 ALRHPFFT 246
           A++HPFF 
Sbjct: 279 AMKHPFFL 286

>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens} Length = 353

 Score =  103 bits (260), Expect = 3e-26
 Identities = 62/247 (25%), Positives = 92/247 (37%), Gaps = 77/247 (31%)

Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           +H   ++H DLKP N+ +                                +K++DFG   
Sbjct: 142 IHSAGVVHRDLKPGNLAVNED---------------------------CELKILDFGLAR 174

Query: 65  YERPDQNYIVSTRHYRAPEVILGLGW-TYPCDIWSVGCILVELCTGEALFQTHENLEHLA 123
           +   +    V TR YRAPEVIL         DIWSVGCI+ E+ TG+ LF+  + L+ L 
Sbjct: 175 HADAEMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLT 234

Query: 124 MMERVLGPLPQHMLKRV-DRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVPFFYGS 182
            + +V G      ++++ D+ A+ Y++                     LP+     F   
Sbjct: 235 QILKVTGVPGTEFVQKLNDKAAKSYIQ--------------------SLPQTPRKDFTQL 274

Query: 183 FVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRH 242
           F                               A D   LL+ +L  D   RLTA +AL H
Sbjct: 275 F-------------------------PRASPQAAD---LLEKMLELDVDKRLTAAQALTH 306

Query: 243 PFFTRDH 249
           PFF    
Sbjct: 307 PFFEPFR 313

>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II} Length = 383

 Score =  103 bits (259), Expect = 4e-26
 Identities = 59/253 (23%), Positives = 103/253 (40%), Gaps = 82/253 (32%)

Query: 3   AVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGS 62
             +H L + H D+KP+N+L+                            K + +K+ DFGS
Sbjct: 155 GFIHSLGICHRDIKPQNLLVN--------------------------SKDNTLKLCDFGS 188

Query: 63  TTYERPDQNYI--VSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHENL 119
                P +  +  + +R YRAPE++LG   +T   D+WS+GC+  EL  G+ LF    ++
Sbjct: 189 AKKLIPSEPSVAYICSRFYRAPELMLGATEYTPSIDLWSIGCVFGELILGKPLFSGETSI 248

Query: 120 EHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQ-VPF 178
           + L  + +++G   +  + R++ H  +                       + P L+   +
Sbjct: 249 DQLVRIIQIMGTPTKEQMIRMNPHYTEV----------------------RFPTLKAKDW 286

Query: 179 FYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTARE 238
                                    + ++ +     A D   LL+ +LRY+P  R+   E
Sbjct: 287 -------------------------RKILPEGTPSLAID---LLEQILRYEPDLRINPYE 318

Query: 239 ALRHPFFTRDHLR 251
           A+ HPFF  DHLR
Sbjct: 319 AMAHPFF--DHLR 329

>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} Length = 362

 Score =  103 bits (259), Expect = 4e-26
 Identities = 51/250 (20%), Positives = 86/250 (34%), Gaps = 80/250 (32%)

Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           +H+  ++H DL P N +L++                            + I + DF    
Sbjct: 150 LHEAGVVHRDLHPGN-ILLADN--------------------------NDITICDFNLAR 182

Query: 65  YERPDQN---YIVSTRHYRAPEVILGL-GWTYPCDIWSVGCILVELCTGEALFQTHENLE 120
            +  D N   Y V+ R YRAPE+++   G+T   D+WS GC++ E+   +ALF+      
Sbjct: 183 EDTADANKTHY-VTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYN 241

Query: 121 HLAMMERVLGPLPQHMLKRVD-RHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVPFF 179
            L  +  V+G      +       A  Y+R                     L  +    +
Sbjct: 242 QLNKIVEVVGTPKIEDVVMFSSPSARDYLRN-------------------SLSNVPARAW 282

Query: 180 YGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREA 239
                                           D  A D   L+  +L ++P  R++  +A
Sbjct: 283 TAVV-------------------------PTADPVALD---LIAKMLEFNPQRRISTEQA 314

Query: 240 LRHPFFTRDH 249
           LRHP+F    
Sbjct: 315 LRHPYFESLF 324

>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7 Length = 367

 Score =  102 bits (257), Expect = 8e-26
 Identities = 64/247 (25%), Positives = 95/247 (38%), Gaps = 77/247 (31%)

Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           +H   +IH DLKP N+ +                                +K++DFG   
Sbjct: 144 IHAAGIIHRDLKPGNLAVNED---------------------------CELKILDFGLAR 176

Query: 65  YERPDQNYIVSTRHYRAPEVILGL-GWTYPCDIWSVGCILVELCTGEALFQTHENLEHLA 123
               +    V TR YRAPEVIL    +T   DIWSVGCI+ E+ TG+ LF+  ++L+ L 
Sbjct: 177 QADSEMTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLK 236

Query: 124 MMERVLGPLPQHMLKRV-DRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVPFFYGS 182
            + +V G  P   ++R+    A+ Y++                     LP L+   F   
Sbjct: 237 EIMKVTGTPPAEFVQRLQSDEAKNYMK--------------------GLPELEKKDFASI 276

Query: 183 FVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRH 242
                                      +    A +   LL+ +L  D   R+TA EAL H
Sbjct: 277 L-------------------------TNASPLAVN---LLEKMLVLDAEQRVTAGEALAH 308

Query: 243 PFFTRDH 249
           P+F   H
Sbjct: 309 PYFESLH 315

>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* Length = 351

 Score =  102 bits (256), Expect = 1e-25
 Identities = 53/253 (20%), Positives = 83/253 (32%), Gaps = 83/253 (32%)

Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG--- 61
           +H   ++H D+K  NVL                           + +   +K+ DFG   
Sbjct: 140 IHRNKILHRDMKAANVL---------------------------ITRDGVLKLADFGLAR 172

Query: 62  --STTYERPDQNY--IVSTRHYRAPEVILGL-GWTYPCDIWSVGCILVELCTGEALFQTH 116
             S         Y   V T  YR PE++LG   +  P D+W  GCI+ E+ T   + Q +
Sbjct: 173 AFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGN 232

Query: 117 ENLEHLAMMERVLG-PLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQ 175
                LA++ ++ G   P+                    WP           V       
Sbjct: 233 TEQHQLALISQLCGSITPE-------------------VWPN----------VDNYE--- 260

Query: 176 VPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLT 235
                     ++   L       +    +  +    D  A D   L+  LL  DP  R+ 
Sbjct: 261 ---------LYEKLELVKGQKRKVKDRLKAYVR---DPYALD---LIDKLLVLDPAQRID 305

Query: 236 AREALRHPFFTRD 248
           + +AL H FF  D
Sbjct: 306 SDDALNHDFFWSD 318

>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ... Length = 367

 Score =  101 bits (254), Expect = 2e-25
 Identities = 59/247 (23%), Positives = 95/247 (38%), Gaps = 77/247 (31%)

Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           +H   +IH DLKP N+ +                                +K++DFG   
Sbjct: 148 IHSADIIHRDLKPSNLAVNED---------------------------CELKILDFGLAR 180

Query: 65  YERPDQNYIVSTRHYRAPEVILGL-GWTYPCDIWSVGCILVELCTGEALFQTHENLEHLA 123
           +   +    V+TR YRAPE++L    +    DIWSVGCI+ EL TG  LF   ++++ L 
Sbjct: 181 HTADEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLK 240

Query: 124 MMERVLGPLPQHMLKRV-DRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVPFFYGS 182
           ++ R++G     +LK++    A  Y++                     L ++    F   
Sbjct: 241 LILRLVGTPGAELLKKISSESARNYIQ--------------------SLTQMPKMNFANV 280

Query: 183 FVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRH 242
           F                            +  A D   LL+ +L  D   R+TA +AL H
Sbjct: 281 F-------------------------IGANPLAVD---LLEKMLVLDSDKRITAAQALAH 312

Query: 243 PFFTRDH 249
            +F + H
Sbjct: 313 AYFAQYH 319

>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3o71_A 3r63_A 3c9w_A* 2y9q_A* 3sa0_A* 1wzy_A* 2e14_A* 1tvo_A* 2ojg_A* 2oji_A* ... Length = 364

 Score =  101 bits (253), Expect = 3e-25
 Identities = 60/254 (23%), Positives = 95/254 (37%), Gaps = 85/254 (33%)

Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG--- 61
           +H   ++H DLKP N LL+++                             +K+ DFG   
Sbjct: 144 IHSANVLHRDLKPSN-LLLNTT--------------------------CDLKICDFGLAR 176

Query: 62  STTYERPDQNYI---VSTRHYRAPEVILGL-GWTYPCDIWSVGCILVELCTGEALFQTHE 117
               +     ++   V+TR YRAPE++L   G+T   DIWSVGCIL E+ +   +F    
Sbjct: 177 VADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 236

Query: 118 NLEHLAMMERVLGPLPQHMLKRV-DRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQ- 175
            L+ L  +  +LG   Q  L  + +  A  Y+                      LP    
Sbjct: 237 YLDQLNHILGILGSPSQEDLNCIINLKARNYLL--------------------SLPHKNK 276

Query: 176 VPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLT 235
           VP+                          N +  + D  A D   LL  +L ++P  R+ 
Sbjct: 277 VPW--------------------------NRLFPNADSKALD---LLDKMLTFNPHKRIE 307

Query: 236 AREALRHPFFTRDH 249
             +AL HP+  + +
Sbjct: 308 VEQALAHPYLEQYY 321

>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A* Length = 353

 Score = 99.6 bits (249), Expect = 1e-24
 Identities = 59/249 (23%), Positives = 97/249 (38%), Gaps = 67/249 (26%)

Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           +H   +IH DLKP N+L+ S+  +KV D+  +    + ++         +          
Sbjct: 128 LHGSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGM------VE 181

Query: 65  YERPDQNYIVSTRHYRAPEVILGL-GWTYPCDIWSVGCILVELCTGEALFQTHENLEHLA 123
           +        V+TR YRAPEV+L    ++   D+WS GCIL EL     +F   +    L 
Sbjct: 182 F--------VATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLL 233

Query: 124 MMERVLG-PLPQHMLKRVD-RHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQ-VPFFY 180
           ++  ++G P   + L+ ++   A +Y++                     LP     P   
Sbjct: 234 LIFGIIGTPHSDNDLRCIESPRAREYIK--------------------SLPMYPAAPL-- 271

Query: 181 GSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREAL 240
                                     +   V+    D   LLQ +L +DP  R+TA+EAL
Sbjct: 272 ------------------------EKMFPRVNPKGID---LLQRMLVFDPAKRITAKEAL 304

Query: 241 RHPFFTRDH 249
            HP+    H
Sbjct: 305 EHPYLQTYH 313

>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii} Length = 458

 Score = 89.9 bits (223), Expect = 7e-21
 Identities = 56/282 (19%), Positives = 95/282 (33%), Gaps = 86/282 (30%)

Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           +H   ++H DLKP N L+     +KV D+  +       +   ++P S     ++  +  
Sbjct: 172 VHSAGILHRDLKPANCLVNQDCSVKVCDFGLARTVDYPENGNSQLPISPREDDMNLVTFP 231

Query: 65  YERPDQNYI---VSTRHYRAPEVILGL-GWTYPCDIWSVGCILVELCT-----------G 109
           + +  +  +   V TR YRAPE+IL    +T   D+WS+GCI  EL              
Sbjct: 232 HTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLNMIKENVAYHADR 291

Query: 110 EALF--------------------QTHENLEHLAMMERVLGPLPQHMLKRV-DRHAEKYV 148
             LF                     T  N + L ++  +LG   +  ++ +    A++Y+
Sbjct: 292 GPLFPGSSCFPLSPDQKAGNDFKFHTRGNRDQLNVIFNILGTPSEEDIEALEKEDAKRYI 351

Query: 149 RRGRLDWPEGAASRESIKSVMKLPRLQ-VPFFYGSFVEFKGYCLAFRCTDCIASFCQNLI 207
           R                      P+ +                                 
Sbjct: 352 R--------------------IFPKREGTDL--------------------------AER 365

Query: 208 MQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRDH 249
                  A     LL+ +L ++P  R+T  E L HPFF    
Sbjct: 366 FPASSADAIH---LLKRMLVFNPNKRITINECLAHPFFKEVR 404

>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A* Length = 432

 Score = 87.5 bits (217), Expect = 4e-20
 Identities = 57/282 (20%), Positives = 89/282 (31%), Gaps = 94/282 (33%)

Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPD------YKSSLHTPKDSSYFKRMPKSSAIKVI 58
           +H+  +IH DLKP N LL     +KV D        S   T   +   +        K +
Sbjct: 145 IHESGIIHRDLKPANCLLNQDCSVKVCDFGLARTINSEKDTNIVNDLEENEEPGPHNKNL 204

Query: 59  DFGSTTYERPDQNYIVSTRHYRAPEVILGL-GWTYPCDIWSVGCILVELCTG-------- 109
               T++        V TR YRAPE+IL    +T   DIWS GCI  EL           
Sbjct: 205 KKQLTSH--------VVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQSHINDP 256

Query: 110 ---EALFQ-----------------THENLEHLAMMERVLGPLPQHMLKRV-DRHAEKYV 148
                LF                     N + L ++  ++G   +  LK +      KY+
Sbjct: 257 TNRFPLFPGSSCFPLSPDRNSKKVHEKSNRDQLNIIFNIIGTPTEDDLKNINKPEVIKYI 316

Query: 149 RRGRLDWPEGAASRESIKSVMKLPRLQ-VPFFYGSFVEFKGYCLAFRCTDCIASFCQNLI 207
           +                      P  + +                               
Sbjct: 317 K--------------------LFPHRKPINL--------------------------KQK 330

Query: 208 MQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRDH 249
              +     +   LL+ +L+++P  R+T  +AL HP+     
Sbjct: 331 YPSISDDGIN---LLESMLKFNPNKRITIDQALDHPYLKDVR 369

>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens} Length = 365

 Score = 85.4 bits (211), Expect = 2e-19
 Identities = 23/121 (19%), Positives = 45/121 (37%), Gaps = 21/121 (17%)

Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           +HD  +IH D+KP+N +L +    +  +   S                  + +ID G + 
Sbjct: 188 VHDCEIIHGDIKPDNFILGNGFLEQDDEDDLSAG----------------LALIDLGQSI 231

Query: 65  YER--PDQNYIVS---TRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENL 119
             +  P      +   T  ++  E++    W Y  D + V   +  +  G  +   +E  
Sbjct: 232 DMKLFPKGTIFTAKCETSGFQCVEMLSNKPWNYQIDYFGVAATVYCMLFGTYMKVKNEGG 291

Query: 120 E 120
           E
Sbjct: 292 E 292

>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens} Length = 319

 Score = 82.5 bits (204), Expect = 1e-18
 Identities = 35/255 (13%), Positives = 66/255 (25%), Gaps = 84/255 (32%)

Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           + +  ++H ++KP N++ V  E                          S  K+ DFG+  
Sbjct: 128 LRENGIVHRNIKPGNIMRVIGE-----------------------DGQSVYKLTDFGAAR 164

Query: 65  YERPDQNY--IVSTRHYRAPEVILGLGWTYP--------CDIWSVGCILVELCTGEALFQ 114
               D+ +  +  T  Y  P++                  D+WS+G       TG   F+
Sbjct: 165 ELEDDEQFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFR 224

Query: 115 THENLEHLA-MMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPR 173
             E       +M +++   P   +  V +        G +DW        S+   ++   
Sbjct: 225 PFEGPRRNKEVMYKIITGKPSGAISGVQK-----AENGPIDWSGDMPVSCSLSRGLQ--- 276

Query: 174 LQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDR 233
                                                       LT +L  +L  D    
Sbjct: 277 ------------------------------------------VLLTPVLANILEADQEKC 294

Query: 234 LTAREALRHPFFTRD 248
               +          
Sbjct: 295 WGFDQFFAETSDILH 309

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A* Length = 494

 Score = 82.1 bits (203), Expect = 4e-18
 Identities = 34/113 (30%), Positives = 49/113 (43%), Gaps = 27/113 (23%)

Query: 3   AVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGS 62
             +H   ++H DLKPEN+LL S E                        K + IK++DFG 
Sbjct: 150 TYLHKHNIVHRDLKPENLLLESKE------------------------KDALIKIVDFGL 185

Query: 63  TTYERPDQNY--IVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALF 113
           +      +     + T +Y APEV+    +   CD+WS+G IL  L  G   F
Sbjct: 186 SAVFENQKKMKERLGTAYYIAPEVLRK-KYDEKCDVWSIGVILFILLAGYPPF 237

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A* Length = 494

 Score = 40.8 bits (96), Expect = 3e-04
 Identities = 9/29 (31%), Positives = 19/29 (65%)

Query: 220 HLLQGLLRYDPTDRLTAREALRHPFFTRD 248
            L++ +L++D   R++A++AL HP+    
Sbjct: 270 DLIKQMLQFDSQRRISAQQALEHPWIKEM 298

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei} Length = 504

 Score = 81.7 bits (202), Expect = 5e-18
 Identities = 30/111 (27%), Positives = 47/111 (42%), Gaps = 27/111 (24%)

Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           +H   ++H D+KPEN+LL +                              IK++DFG ++
Sbjct: 162 LHKHNIVHRDIKPENILLENKN------------------------SLLNIKIVDFGLSS 197

Query: 65  YERPDQNY--IVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALF 113
           +   D      + T +Y APEV+    +   CD+WS G I+  L  G   F
Sbjct: 198 FFSKDYKLRDRLGTAYYIAPEVLKK-KYNEKCDVWSCGVIMYILLCGYPPF 247

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei} Length = 504

 Score = 40.8 bits (96), Expect = 3e-04
 Identities = 10/29 (34%), Positives = 15/29 (51%)

Query: 220 HLLQGLLRYDPTDRLTAREALRHPFFTRD 248
            L++ +L YD   R TA EAL   +  + 
Sbjct: 280 ELIKLMLTYDYNKRCTAEEALNSRWIKKY 308

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A* Length = 484

 Score = 80.5 bits (199), Expect = 1e-17
 Identities = 36/113 (31%), Positives = 51/113 (45%), Gaps = 27/113 (23%)

Query: 3   AVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGS 62
             MH   ++H DLKPEN+LL S                          K + I++IDFG 
Sbjct: 140 TYMHKNKIVHRDLKPENLLLESKS------------------------KDANIRIIDFGL 175

Query: 63  TTYERPDQNY--IVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALF 113
           +T+    +     + T +Y APEV+ G  +   CD+WS G IL  L +G   F
Sbjct: 176 STHFEASKKMKDKIGTAYYIAPEVLHG-TYDEKCDVWSTGVILYILLSGCPPF 227

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A* Length = 484

 Score = 40.8 bits (96), Expect = 2e-04
 Identities = 10/29 (34%), Positives = 18/29 (62%)

Query: 220 HLLQGLLRYDPTDRLTAREALRHPFFTRD 248
            L++ +L Y P+ R++AR+AL H +    
Sbjct: 260 DLIRKMLTYVPSMRISARDALDHEWIQTY 288

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A* Length = 486

 Score = 80.1 bits (198), Expect = 2e-17
 Identities = 38/113 (33%), Positives = 51/113 (45%), Gaps = 27/113 (23%)

Query: 3   AVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGS 62
             MH   ++H DLKPEN+LL S E                        K   IK+IDFG 
Sbjct: 135 TYMHKHNIVHRDLKPENILLESKE------------------------KDCDIKIIDFGL 170

Query: 63  TTYERPDQNY--IVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALF 113
           +T  + +      + T +Y APEV+ G  +   CD+WS G IL  L +G   F
Sbjct: 171 STCFQQNTKMKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPF 222

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A* Length = 486

 Score = 40.4 bits (95), Expect = 3e-04
 Identities = 9/29 (31%), Positives = 18/29 (62%)

Query: 220 HLLQGLLRYDPTDRLTAREALRHPFFTRD 248
            L++ +L + P+ R+TA + L HP+  + 
Sbjct: 255 DLIRKMLTFHPSLRITATQCLEHPWIQKY 283

>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A Length = 351

 Score = 79.7 bits (197), Expect = 2e-17
 Identities = 29/102 (28%), Positives = 39/102 (38%), Gaps = 27/102 (26%)

Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG-ST 63
            HD  +IH D+KP  VLL S E                         S+ +K+  FG + 
Sbjct: 146 CHDNNIIHRDVKPHCVLLASKE------------------------NSAPVKLGGFGVAI 181

Query: 64  TYERPDQNY--IVSTRHYRAPEVILGLGWTYPCDIWSVGCIL 103
                       V T H+ APEV+    +  P D+W  G IL
Sbjct: 182 QLGESGLVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVIL 223

>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A Length = 351

 Score = 41.9 bits (99), Expect = 1e-04
 Identities = 11/29 (37%), Positives = 17/29 (58%)

Query: 220 HLLQGLLRYDPTDRLTAREALRHPFFTRD 248
            L++ +L  DP +R+T  EAL HP+    
Sbjct: 265 DLVRRMLMLDPAERITVYEALNHPWLKER 293

>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A Length = 316

 Score = 78.5 bits (194), Expect = 3e-17
 Identities = 43/264 (16%), Positives = 73/264 (27%), Gaps = 108/264 (40%)

Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           +H+  + H DLKPEN+L                             + S +K+ DF   +
Sbjct: 127 LHNKGIAHRDLKPENILCEHPN------------------------QVSPVKICDFDLGS 162

Query: 65  YERPDQNY----------IVSTRHYRAPEVILGLGWTY-----PCDIWSVGCILVELCTG 109
             + + +              +  Y APEV+             CD+WS+G IL  L +G
Sbjct: 163 GIKLNGDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSG 222

Query: 110 EALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLD-----WPEGAASRES 164
              F      +               + + +        + G+ +     W         
Sbjct: 223 YPPFVGRCGSDCGWDRGEACPACQNMLFESI--------QEGKYEFPDKDWA-------- 266

Query: 165 IKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQG 224
                                                        H+  +A DL   +  
Sbjct: 267 ---------------------------------------------HISCAAKDL---ISK 278

Query: 225 LLRYDPTDRLTAREALRHPFFTRD 248
           LL  D   RL+A + L+HP+    
Sbjct: 279 LLVRDAKQRLSAAQVLQHPWVQGC 302

>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A* Length = 676

 Score = 79.0 bits (194), Expect = 5e-17
 Identities = 39/244 (15%), Positives = 63/244 (25%), Gaps = 80/244 (32%)

Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           +H+  +IH DLKPEN++L                            +    K+ID G   
Sbjct: 137 LHENRIIHRDLKPENIVLQPGP------------------------QRLIHKIIDLGYAK 172

Query: 65  YERPDQNY--IVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHL 122
                +     V T  Y APE++    +T   D WS G +  E  TG             
Sbjct: 173 ELDQGELCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGF------------ 220

Query: 123 AMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVPFFYGS 182
                     P     +  +   K   +             ++K    LP          
Sbjct: 221 ---------RPFLPNWQPVQWHGKVREKSNEHIVVYDDLTGAVKFSSVLP---------- 261

Query: 183 FVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRH 242
                         + ++      +              LQ +L +    R T  +    
Sbjct: 262 ------------TPNHLSGILAGKL-----------ERWLQCMLMWHQRQRGTDPQNPNV 298

Query: 243 PFFT 246
             F 
Sbjct: 299 GCFQ 302

>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A* Length = 371

 Score = 78.2 bits (192), Expect = 6e-17
 Identities = 32/247 (12%), Positives = 55/247 (22%), Gaps = 98/247 (39%)

Query: 3   AVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGS 62
           A +    ++H    P+N+ ++                               + + D  +
Sbjct: 208 ANLQSKGLVHGHFTPDNLFIM---------------------------PDGRLMLGDVSA 240

Query: 63  TTYERPDQNYIVSTRHYRAPEVILGLGWTY--PCDIWSVGCILVELCTGEALFQTHENLE 120
                           Y   E +     T+    + W +G  +  +      F       
Sbjct: 241 LWKVGTRGPASSVPVTYAPREFLNASTATFTHALNAWQLGLSIYRVWCLFLPF------- 293

Query: 121 HLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVPFFY 180
                                                       IK   K P L+VP   
Sbjct: 294 --------------------------------------GLVTPGIKGSWKRPSLRVPGTD 315

Query: 181 GSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREAL 240
                     LAF     +  F + LI +            L     +D   RL   EA+
Sbjct: 316 S---------LAFGSCTPLPDFVKTLIGR-----------FLN----FDRRRRLLPLEAM 351

Query: 241 RHPFFTR 247
             P F +
Sbjct: 352 ETPEFLQ 358

>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens} Length = 444

 Score = 78.5 bits (194), Expect = 7e-17
 Identities = 29/102 (28%), Positives = 44/102 (43%), Gaps = 27/102 (26%)

Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG-ST 63
            H + ++H +LKPEN+LL S                          K +A+K+ DFG + 
Sbjct: 126 CHQMGVVHRNLKPENLLLASKL------------------------KGAAVKLADFGLAI 161

Query: 64  TYERPDQNY--IVSTRHYRAPEVILGLGWTYPCDIWSVGCIL 103
             E   Q +     T  Y +PEV+    +  P D+W+ G IL
Sbjct: 162 EVEGEQQAWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVIL 203

>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens} Length = 444

 Score = 40.0 bits (94), Expect = 4e-04
 Identities = 11/29 (37%), Positives = 19/29 (65%)

Query: 220 HLLQGLLRYDPTDRLTAREALRHPFFTRD 248
            L+  +L  +P+ R+TA EAL+HP+ +  
Sbjct: 246 DLINKMLTINPSKRITAAEALKHPWISHR 274

>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B Length = 362

 Score = 77.4 bits (191), Expect = 1e-16
 Identities = 28/101 (27%), Positives = 42/101 (41%), Gaps = 26/101 (25%)

Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
            H   ++H +LKPEN+LL S                          K +A+K+ DFG   
Sbjct: 144 CHSNGIVHRNLKPENLLLASKA------------------------KGAAVKLADFGLAI 179

Query: 65  YERPDQNY--IVSTRHYRAPEVILGLGWTYPCDIWSVGCIL 103
                + +     T  Y +PEV+    ++ P DIW+ G IL
Sbjct: 180 EVNDSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVIL 220

>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B Length = 362

 Score = 41.5 bits (98), Expect = 1e-04
 Identities = 11/39 (28%), Positives = 18/39 (46%), Gaps = 3/39 (7%)

Query: 210 HVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRD 248
            V   A  L   +  +L  +P  R+TA +AL+ P+    
Sbjct: 256 TVTPEAKSL---IDSMLTVNPKKRITADQALKVPWICNR 291

>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A* Length = 434

 Score = 77.5 bits (191), Expect = 1e-16
 Identities = 28/121 (23%), Positives = 51/121 (42%), Gaps = 29/121 (23%)

Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           +H L +IH DLKP+N+L+ +S               + ++  +   ++  I + DFG   
Sbjct: 131 LHSLKIIHRDLKPQNILVSTSS--------------RFTADQQTGAENLRILISDFGLCK 176

Query: 65  YERPDQNYIVSTRH-------YRAPEVILGLGW-------TYPCDIWSVGCIL-VELCTG 109
                Q+   +  +       +RAPE++            T   DI+S+GC+    L  G
Sbjct: 177 KLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKG 236

Query: 110 E 110
           +
Sbjct: 237 K 237

>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A* Length = 434

 Score = 42.8 bits (101), Expect = 6e-05
 Identities = 13/43 (30%), Positives = 21/43 (48%), Gaps = 3/43 (6%)

Query: 209 QHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRDHLR 251
           + +   A DL   +  ++ +DP  R TA + LRHP F     +
Sbjct: 266 RSLIAEATDL---ISQMIDHDPLKRPTAMKVLRHPLFWPKSKK 305

>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ... Length = 283

 Score = 75.7 bits (187), Expect = 2e-16
 Identities = 25/101 (24%), Positives = 39/101 (38%), Gaps = 25/101 (24%)

Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           +H   + H DLKPEN++L+                        +   +  IK+IDFG   
Sbjct: 124 LHSKRIAHFDLKPENIMLLD-----------------------KNVPNPRIKLIDFGIAH 160

Query: 65  YERPDQNY--IVSTRHYRAPEVILGLGWTYPCDIWSVGCIL 103
                  +  I  T  + APE++         D+WS+G I 
Sbjct: 161 KIEAGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVIT 201

>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ... Length = 283

 Score = 39.1 bits (92), Expect = 7e-04
 Identities = 8/28 (28%), Positives = 14/28 (50%)

Query: 221 LLQGLLRYDPTDRLTAREALRHPFFTRD 248
            ++ LL  DP  R+T  ++L H +    
Sbjct: 245 FIRRLLVKDPKRRMTIAQSLEHSWIKAI 272

>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens} Length = 326

 Score = 76.1 bits (188), Expect = 2e-16
 Identities = 26/101 (25%), Positives = 38/101 (37%), Gaps = 25/101 (24%)

Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           +H L + H DLKPEN++L+                               IK+IDFG   
Sbjct: 130 LHSLQIAHFDLKPENIMLLDRN-----------------------VPKPRIKIIDFGLAH 166

Query: 65  YERPDQNY--IVSTRHYRAPEVILGLGWTYPCDIWSVGCIL 103
                  +  I  T  + APE++         D+WS+G I 
Sbjct: 167 KIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVIT 207

>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A Length = 573

 Score = 76.8 bits (189), Expect = 3e-16
 Identities = 30/101 (29%), Positives = 44/101 (43%), Gaps = 27/101 (26%)

Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           MH+   +H DLKPEN++  +                          +S+ +K+IDFG T 
Sbjct: 271 MHENNYVHLDLKPENIMFTT-------------------------KRSNELKLIDFGLTA 305

Query: 65  YERPDQNY--IVSTRHYRAPEVILGLGWTYPCDIWSVGCIL 103
           +  P Q+      T  + APEV  G    Y  D+WSVG + 
Sbjct: 306 HLDPKQSVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLS 346

>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7 Length = 321

 Score = 75.7 bits (187), Expect = 3e-16
 Identities = 24/101 (23%), Positives = 43/101 (42%), Gaps = 27/101 (26%)

Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           +H   + H D++PEN++  +                          +SS IK+I+FG   
Sbjct: 118 LHSHNIGHFDIRPENIIYQT-------------------------RRSSTIKIIEFGQAR 152

Query: 65  YERPDQNY--IVSTRHYRAPEVILGLGWTYPCDIWSVGCIL 103
             +P  N+  + +   Y APEV      +   D+WS+G ++
Sbjct: 153 QLKPGDNFRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLV 193

>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7 Length = 321

 Score = 39.1 bits (92), Expect = 8e-04
 Identities = 10/30 (33%), Positives = 16/30 (53%)

Query: 220 HLLQGLLRYDPTDRLTAREALRHPFFTRDH 249
             +  LL  +   R+TA EAL+HP+  +  
Sbjct: 236 DFVDRLLVKERKSRMTASEALQHPWLKQKI 265

>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens} Length = 349

 Score = 75.8 bits (187), Expect = 3e-16
 Identities = 26/103 (25%), Positives = 41/103 (39%), Gaps = 26/103 (25%)

Query: 3   AVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGS 62
           A +H+  ++H DLKPEN+L  +                            + +K+ DFG 
Sbjct: 162 AYLHENGIVHRDLKPENLLYATPA------------------------PDAPLKIADFGL 197

Query: 63  TTYERPDQNY--IVSTRHYRAPEVILGLGWTYPCDIWSVGCIL 103
           +           +  T  Y APE++ G  +    D+WSVG I 
Sbjct: 198 SKIVEHQVLMKTVCGTPGYCAPEILRGCAYGPEVDMWSVGIIT 240

>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens} Length = 349

 Score = 39.2 bits (92), Expect = 8e-04
 Identities = 15/37 (40%), Positives = 22/37 (59%), Gaps = 3/37 (8%)

Query: 210 HVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFT 246
            V  +A DL   ++ L+  DP  RLT  +AL+HP+ T
Sbjct: 277 EVSLNAKDL---VRKLIVLDPKKRLTTFQALQHPWVT 310

>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A* Length = 284

 Score = 74.9 bits (185), Expect = 4e-16
 Identities = 28/101 (27%), Positives = 42/101 (41%), Gaps = 26/101 (25%)

Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
            H   ++H +LKPEN+LL S                          K +A+K+ DFG   
Sbjct: 121 CHSNGIVHRNLKPENLLLASKA------------------------KGAAVKLADFGLAI 156

Query: 65  YERPDQNY--IVSTRHYRAPEVILGLGWTYPCDIWSVGCIL 103
                + +     T  Y +PEV+    ++ P DIW+ G IL
Sbjct: 157 EVNDSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVIL 197

>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A* Length = 284

 Score = 40.2 bits (95), Expect = 3e-04
 Identities = 11/39 (28%), Positives = 18/39 (46%), Gaps = 3/39 (7%)

Query: 210 HVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRD 248
            V   A  L   +  +L  +P  R+TA +AL+ P+    
Sbjct: 233 TVTPEAKSL---IDSMLTVNPKKRITADQALKVPWICNR 268

>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A Length = 321

 Score = 75.4 bits (186), Expect = 4e-16
 Identities = 25/101 (24%), Positives = 37/101 (36%), Gaps = 25/101 (24%)

Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           +H   + H DLKPEN++L+                               IK+IDFG   
Sbjct: 131 LHTKKIAHFDLKPENIMLLDKN-----------------------IPIPHIKLIDFGLAH 167

Query: 65  YERPDQNY--IVSTRHYRAPEVILGLGWTYPCDIWSVGCIL 103
                  +  I  T  + APE++         D+WS+G I 
Sbjct: 168 EIEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVIT 208

>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A Length = 321

 Score = 38.8 bits (91), Expect = 9e-04
 Identities = 12/29 (41%), Positives = 17/29 (58%)

Query: 220 HLLQGLLRYDPTDRLTAREALRHPFFTRD 248
             ++ LL  +   RLT +EALRHP+ T  
Sbjct: 251 DFIRKLLVKETRKRLTIQEALRHPWITPV 279

>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A* Length = 361

 Score = 75.5 bits (186), Expect = 5e-16
 Identities = 25/101 (24%), Positives = 37/101 (36%), Gaps = 25/101 (24%)

Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           +H   + H DLKPEN++L+                               IK+IDFG   
Sbjct: 131 LHTKKIAHFDLKPENIMLLDKN-----------------------IPIPHIKLIDFGLAH 167

Query: 65  YERPDQNY--IVSTRHYRAPEVILGLGWTYPCDIWSVGCIL 103
                  +  I  T  + APE++         D+WS+G I 
Sbjct: 168 EIEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVIT 208

>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A* Length = 361

 Score = 38.9 bits (91), Expect = 8e-04
 Identities = 14/40 (35%), Positives = 19/40 (47%), Gaps = 3/40 (7%)

Query: 210 HVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRDH 249
                A D    ++ LL  +   RLT +EALRHP+ T   
Sbjct: 244 QTSELAKDF---IRKLLVKETRKRLTIQEALRHPWITPVD 280

>4apc_A Serine/threonine-protein kinase NEK1; transferase; 2.10A {Homo sapiens} Length = 350

 Score = 75.5 bits (186), Expect = 5e-16
 Identities = 29/137 (21%), Positives = 55/137 (40%), Gaps = 33/137 (24%)

Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           +HD  ++H D+K +N+ L                            K   +++ DFG   
Sbjct: 141 VHDRKILHRDIKSQNIFL---------------------------TKDGTVQLGDFGIAR 173

Query: 65  YERPDQNY---IVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEH 121
                       + T +Y +PE+     +    DIW++GC+L ELCT +  F+   ++++
Sbjct: 174 VLNSTVELARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEA-GSMKN 232

Query: 122 LAM--MERVLGPLPQHM 136
           L +  +     P+  H 
Sbjct: 233 LVLKIISGSFPPVSLHY 249

>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens} Length = 343

 Score = 75.1 bits (185), Expect = 5e-16
 Identities = 34/155 (21%), Positives = 55/155 (35%), Gaps = 51/155 (32%)

Query: 3   AVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGS 62
             +H   ++H+DLKP N L+V                               +K+IDFG 
Sbjct: 122 HTIHQHGIVHSDLKPANFLIVDGM----------------------------LKLIDFGI 153

Query: 63  TTYERPDQNYI-----VSTRHYRAPEVILGLG-----------WTYPCDIWSVGCILVEL 106
               +PD   +     V T +Y  PE I  +             +   D+WS+GCIL  +
Sbjct: 154 ANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYM 213

Query: 107 CTGEALFQTHENLEHLAMMERVLG-----PLPQHM 136
             G+  FQ   N   ++ +  ++        P   
Sbjct: 214 TYGKTPFQQIIN--QISKLHAIIDPNHEIEFPDIP 246

>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens} Length = 343

 Score = 47.0 bits (112), Expect = 2e-06
 Identities = 11/33 (33%), Positives = 17/33 (51%)

Query: 217 DLTHLLQGLLRYDPTDRLTAREALRHPFFTRDH 249
           DL  +L+  L+ DP  R++  E L HP+     
Sbjct: 249 DLQDVLKCCLKRDPKQRISIPELLAHPYVQIQT 281

>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A Length = 303

 Score = 74.7 bits (184), Expect = 5e-16
 Identities = 38/182 (20%), Positives = 68/182 (37%), Gaps = 30/182 (16%)

Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYF---KRMPKSSAIKVIDFG 61
           +H   +IH DLKP N+ +  S  +K+ D             F   K + +S  I  +D  
Sbjct: 132 IHSQGIIHRDLKPMNIFIDESRNVKIGD-------------FGLAKNVHRSLDILKLDSQ 178

Query: 62  STTYERPDQNYIVSTRHYRAPEVILGLGW-TYPCDIWSVGCILVELCTGEALFQTHENLE 120
           +      +    + T  Y A EV+ G G      D++S+G I  E+      F T     
Sbjct: 179 NLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIYP---FSTGMERV 235

Query: 121 HLAMMERVLG---PLPQHMLKRVDRHAEKYVRRG-RLDWPEGAASRESIKSVMKLPRLQV 176
           ++  ++++       P        +  +K +R     D P     R   ++++    L V
Sbjct: 236 NI--LKKLRSVSIEFPPDFDDNKMKVEKKIIRLLIDHD-PN---KRPGARTLLNSGWLPV 289

Query: 177 PF 178
             
Sbjct: 290 KH 291

>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A Length = 303

 Score = 41.2 bits (97), Expect = 1e-04
 Identities = 8/34 (23%), Positives = 15/34 (44%)

Query: 212 DHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFF 245
           D+       +++ L+ +DP  R  AR  L   + 
Sbjct: 254 DNKMKVEKKIIRLLIDHDPNKRPGARTLLNSGWL 287

>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A* Length = 313

 Score = 75.0 bits (185), Expect = 5e-16
 Identities = 34/155 (21%), Positives = 55/155 (35%), Gaps = 51/155 (32%)

Query: 3   AVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGS 62
             +H   ++H+DLKP N L+V                               +K+IDFG 
Sbjct: 141 HTIHQHGIVHSDLKPANFLIVDGM----------------------------LKLIDFGI 172

Query: 63  TTYERPDQNYIVS-----TRHYRAPEVILGLGW-----------TYPCDIWSVGCILVEL 106
               +PD   +V      T +Y  PE I  +             +   D+WS+GCIL  +
Sbjct: 173 ANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYM 232

Query: 107 CTGEALFQTHENLEHLAMMERVLG-----PLPQHM 136
             G+  FQ   N   ++ +  ++        P   
Sbjct: 233 TYGKTPFQQIIN--QISKLHAIIDPNHEIEFPDIP 265

>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A* Length = 313

 Score = 47.3 bits (113), Expect = 1e-06
 Identities = 11/33 (33%), Positives = 17/33 (51%)

Query: 217 DLTHLLQGLLRYDPTDRLTAREALRHPFFTRDH 249
           DL  +L+  L+ DP  R++  E L HP+     
Sbjct: 268 DLQDVLKCCLKRDPKQRISIPELLAHPYVQIQT 300

>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7 Length = 387

 Score = 75.1 bits (185), Expect = 7e-16
 Identities = 25/101 (24%), Positives = 46/101 (45%), Gaps = 27/101 (26%)

Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           MH+  ++H D+KPEN++  +                          K+S++K+IDFG  T
Sbjct: 165 MHEHSIVHLDIKPENIMCET-------------------------KKASSVKIIDFGLAT 199

Query: 65  YERPDQNY--IVSTRHYRAPEVILGLGWTYPCDIWSVGCIL 103
              PD+      +T  + APE++      +  D+W++G + 
Sbjct: 200 KLNPDEIVKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLG 240

>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7 Length = 387

 Score = 40.1 bits (94), Expect = 4e-04
 Identities = 12/29 (41%), Positives = 18/29 (62%)

Query: 221 LLQGLLRYDPTDRLTAREALRHPFFTRDH 249
            ++ LL+ +P  RLT  +AL HP+   DH
Sbjct: 284 FIKNLLQKEPRKRLTVHDALEHPWLKGDH 312

>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A* Length = 287

 Score = 74.2 bits (183), Expect = 8e-16
 Identities = 35/101 (34%), Positives = 47/101 (46%), Gaps = 27/101 (26%)

Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           MH   ++H DLKPEN+LL S E                        K   IK+IDFG +T
Sbjct: 137 MHKHNIVHRDLKPENILLESKE------------------------KDCDIKIIDFGLST 172

Query: 65  YERPDQNY--IVSTRHYRAPEVILGLGWTYPCDIWSVGCIL 103
             + +      + T +Y APEV+ G  +   CD+WS G IL
Sbjct: 173 CFQQNTKMKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVIL 212

>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A* Length = 287

 Score = 39.9 bits (94), Expect = 4e-04
 Identities = 9/29 (31%), Positives = 18/29 (62%)

Query: 220 HLLQGLLRYDPTDRLTAREALRHPFFTRD 248
            L++ +L + P+ R+TA + L HP+  + 
Sbjct: 255 DLIRKMLTFHPSLRITATQCLEHPWIQKY 283

>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii} Length = 285

 Score = 74.2 bits (183), Expect = 8e-16
 Identities = 30/101 (29%), Positives = 41/101 (40%), Gaps = 27/101 (26%)

Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
            H   ++H DLKPEN+L   +                           S IK+IDFG   
Sbjct: 140 FHSQHVVHKDLKPENILFQDTS------------------------PHSPIKIIDFGLAE 175

Query: 65  YERPDQNY--IVSTRHYRAPEVILGLGWTYPCDIWSVGCIL 103
             + D++      T  Y APEV      T+ CDIWS G ++
Sbjct: 176 LFKSDEHSTNAAGTALYMAPEVFKR-DVTFKCDIWSAGVVM 215

>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii} Length = 285

 Score = 39.5 bits (93), Expect = 5e-04
 Identities = 10/26 (38%), Positives = 15/26 (57%)

Query: 220 HLLQGLLRYDPTDRLTAREALRHPFF 245
            LL+ +L  DP  R +A + L H +F
Sbjct: 257 DLLKQMLTKDPERRPSAAQVLHHEWF 282

>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A Length = 342

 Score = 74.2 bits (183), Expect = 1e-15
 Identities = 31/128 (24%), Positives = 50/128 (39%), Gaps = 26/128 (20%)

Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           +H   ++H DLKP N+L V                              +I++ DFG   
Sbjct: 132 LHAQGVVHRDLKPSNILYVDES-----------------------GNPESIRICDFGFAK 168

Query: 65  YERPDQNY---IVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEH 121
             R +         T ++ APEV+   G+   CDIWS+G +L  + TG   F    +   
Sbjct: 169 QLRAENGLLMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFANGPDDTP 228

Query: 122 LAMMERVL 129
             ++ R+ 
Sbjct: 229 EEILARIG 236

>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A Length = 342

 Score = 42.3 bits (100), Expect = 7e-05
 Identities = 15/39 (38%), Positives = 19/39 (48%), Gaps = 3/39 (7%)

Query: 210 HVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRD 248
            V  +A DL   +  +L  DP  RLTA   LRHP+    
Sbjct: 249 SVSDTAKDL---VSKMLHVDPHQRLTAALVLRHPWIVHW 284

>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A* Length = 277

 Score = 73.4 bits (181), Expect = 1e-15
 Identities = 28/101 (27%), Positives = 42/101 (41%), Gaps = 27/101 (26%)

Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
            H L + H DLKPEN L ++                            S +K+IDFG   
Sbjct: 122 CHKLNVAHRDLKPENFLFLTDS------------------------PDSPLKLIDFGLAA 157

Query: 65  YERPDQNY--IVSTRHYRAPEVILGLGWTYPCDIWSVGCIL 103
             +P +     V T +Y +P+V+ G  +   CD WS G ++
Sbjct: 158 RFKPGKMMRTKVGTPYYVSPQVLEG-LYGPECDEWSAGVMM 197

>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A* Length = 277

 Score = 40.7 bits (96), Expect = 2e-04
 Identities = 12/39 (30%), Positives = 20/39 (51%), Gaps = 3/39 (7%)

Query: 210 HVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRD 248
           +V   A  L   ++ LL   P  R+T+ +AL H +F + 
Sbjct: 233 NVSPQAESL---IRRLLTKSPKQRITSLQALEHEWFEKQ 268

>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens} Length = 373

 Score = 74.0 bits (182), Expect = 2e-15
 Identities = 30/101 (29%), Positives = 44/101 (43%), Gaps = 27/101 (26%)

Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           MH + ++H DLKPEN+L V+                           +  IK+IDFG   
Sbjct: 203 MHQMYILHLDLKPENILCVN-------------------------RDAKQIKIIDFGLAR 237

Query: 65  YERPDQNY--IVSTRHYRAPEVILGLGWTYPCDIWSVGCIL 103
             +P +       T  + APEV+     ++P D+WSVG I 
Sbjct: 238 RYKPREKLKVNFGTPEFLAPEVVNYDFVSFPTDMWSVGVIA 278

>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A* Length = 289

 Score = 73.1 bits (180), Expect = 2e-15
 Identities = 21/132 (15%), Positives = 42/132 (31%), Gaps = 12/132 (9%)

Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           +H + ++H D+KP N+ +  +        +        +            K+ D G  T
Sbjct: 131 IHSMSLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNK--------VMFKIGDLGHVT 182

Query: 65  YERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLA 123
                         + A EV+          DI+++   +V     E L +  +    + 
Sbjct: 183 -RISSPQVEEGDSRFLANEVLQENYTHLPKADIFALALTVVCAAGAEPLPRNGDQWHEIR 241

Query: 124 MMERVLGPLPQH 135
                L  +PQ 
Sbjct: 242 QGR--LPRIPQV 251

>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens} Length = 396

 Score = 74.1 bits (182), Expect = 2e-15
 Identities = 35/249 (14%), Positives = 66/249 (26%), Gaps = 84/249 (33%)

Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           + +  ++H ++KP N++ V  E                          S  K+ DFG+  
Sbjct: 128 LRENGIVHRNIKPGNIMRVIGE-----------------------DGQSVYKLTDFGAAR 164

Query: 65  YERPDQNY--IVSTRHYRAPEVILGLGWTYP--------CDIWSVGCILVELCTGEALFQ 114
               D+ +  +  T  Y  P++                  D+WS+G       TG   F+
Sbjct: 165 ELEDDEQFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFR 224

Query: 115 THENLEHLA-MMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPR 173
             E       +M +++   P   +  V +        G +DW        S+   ++   
Sbjct: 225 PFEGPRRNKEVMYKIITGKPSGAISGVQK-----AENGPIDWSGDMPVSCSLSRGLQ--- 276

Query: 174 LQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDR 233
                                                       LT +L  +L  D    
Sbjct: 277 ------------------------------------------VLLTPVLANILEADQEKC 294

Query: 234 LTAREALRH 242
               +    
Sbjct: 295 WGFDQFFAE 303

>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A* Length = 279

 Score = 72.7 bits (179), Expect = 2e-15
 Identities = 33/132 (25%), Positives = 49/132 (37%), Gaps = 33/132 (25%)

Query: 10  MIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD 69
           ++H DLKP NV L                                +K+ DFG       D
Sbjct: 137 VLHRDLKPANVFLD---------------------------GKQNVKLGDFGLARILNHD 169

Query: 70  QNY---IVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAM-- 124
            ++    V T +Y +PE +  + +    DIWS+GC+L ELC     F    + + LA   
Sbjct: 170 TSFAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTA-FSQKELAGKI 228

Query: 125 MERVLGPLPQHM 136
            E     +P   
Sbjct: 229 REGKFRRIPYRY 240

>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A* Length = 279

 Score = 39.6 bits (93), Expect = 5e-04
 Identities = 7/36 (19%), Positives = 14/36 (38%), Gaps = 1/36 (2%)

Query: 217 DLTHLLQGLLRYDPTDRLTAREALRHPFFTRDHLRR 252
           +L  ++  +L      R +  E L +P    +H   
Sbjct: 243 ELNEIITRMLNLKDYHRPSVEEILENPLI-LEHHHH 277

>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A* Length = 390

 Score = 73.7 bits (181), Expect = 2e-15
 Identities = 33/155 (21%), Positives = 54/155 (34%), Gaps = 51/155 (32%)

Query: 3   AVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGS 62
             +H   ++H+DLKP N L+V                               +K+IDFG 
Sbjct: 169 HTIHQHGIVHSDLKPANFLIVDGM----------------------------LKLIDFGI 200

Query: 63  TTYERPDQNYIVS-----TRHYRAPEVILGLGW-----------TYPCDIWSVGCILVEL 106
               +PD   +V        +Y  PE I  +             +   D+WS+GCIL  +
Sbjct: 201 ANQMQPDTTSVVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYM 260

Query: 107 CTGEALFQTHENLEHLAMMERVLG-----PLPQHM 136
             G+  FQ   N   ++ +  ++        P   
Sbjct: 261 TYGKTPFQQIIN--QISKLHAIIDPNHEIEFPDIP 293

>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A* Length = 390

 Score = 46.7 bits (111), Expect = 3e-06
 Identities = 11/33 (33%), Positives = 17/33 (51%)

Query: 217 DLTHLLQGLLRYDPTDRLTAREALRHPFFTRDH 249
           DL  +L+  L+ DP  R++  E L HP+     
Sbjct: 296 DLQDVLKCCLKRDPKQRISIPELLAHPYVQIQT 328

>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II} Length = 345

 Score = 73.3 bits (180), Expect = 2e-15
 Identities = 30/118 (25%), Positives = 47/118 (39%), Gaps = 34/118 (28%)

Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG-ST 63
           +H+  + H D+KPEN L  +++                         S  IK++DFG S 
Sbjct: 184 LHNQGICHRDIKPENFLFSTNK-------------------------SFEIKLVDFGLSK 218

Query: 64  TYERPDQNY------IVSTRHYRAPEVILGLGWTY--PCDIWSVGCILVELCTGEALF 113
            + + +            T ++ APEV+     +Y   CD WS G +L  L  G   F
Sbjct: 219 EFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKCDAWSAGVLLHLLLMGAVPF 276

>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II} Length = 345

 Score = 44.1 bits (104), Expect = 2e-05
 Identities = 10/30 (33%), Positives = 16/30 (53%)

Query: 220 HLLQGLLRYDPTDRLTAREALRHPFFTRDH 249
            LL  LL  +  +R  A  AL+HP+ ++  
Sbjct: 309 DLLSNLLNRNVDERFDAMRALQHPWISQFS 338

>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A* Length = 327

 Score = 73.1 bits (180), Expect = 2e-15
 Identities = 26/101 (25%), Positives = 40/101 (39%), Gaps = 26/101 (25%)

Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           +H   ++H DLKP+N+LL S                              IK++DFG + 
Sbjct: 147 LHQNNIVHLDLKPQNILLSSIY------------------------PLGDIKIVDFGMSR 182

Query: 65  YERPDQNY--IVSTRHYRAPEVILGLGWTYPCDIWSVGCIL 103
                     I+ T  Y APE++     T   D+W++G I 
Sbjct: 183 KIGHACELREIMGTPEYLAPEILNYDPITTATDMWNIGIIA 223

>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A* Length = 327

 Score = 39.2 bits (92), Expect = 7e-04
 Identities = 9/28 (32%), Positives = 13/28 (46%)

Query: 220 HLLQGLLRYDPTDRLTAREALRHPFFTR 247
             +Q LL  +P  R TA   L H +  +
Sbjct: 266 DFIQSLLVKNPEKRPTAEICLSHSWLQQ 293

>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B* Length = 284

 Score = 72.3 bits (178), Expect = 3e-15
 Identities = 28/133 (21%), Positives = 46/133 (34%), Gaps = 33/133 (24%)

Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG-ST 63
           +H   +I+ DLKP N+ LV                            +  +K+ DFG  T
Sbjct: 138 IHSKKLINRDLKPSNIFLV---------------------------DTKQVKIGDFGLVT 170

Query: 64  TYERPDQNY-IVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHL 122
           + +   +      T  Y +PE I    +    D++++G IL EL     +  T       
Sbjct: 171 SLKNDGKRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLH---VCDTAFETSKF 227

Query: 123 AMMERVLGPLPQH 135
               R  G +   
Sbjct: 228 FTDLR-DGIISDI 239

>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B* Length = 284

 Score = 39.6 bits (93), Expect = 5e-04
 Identities = 11/31 (35%), Positives = 12/31 (38%)

Query: 217 DLTHLLQGLLRYDPTDRLTAREALRHPFFTR 247
               LLQ LL   P DR    E LR     +
Sbjct: 243 KEKTLLQKLLSKKPEDRPNTSEILRTLTVWK 273

>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A Length = 325

 Score = 72.7 bits (179), Expect = 3e-15
 Identities = 33/102 (32%), Positives = 45/102 (44%), Gaps = 27/102 (26%)

Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           MHD+ ++H DLKPEN+L                              +  IK+IDFG   
Sbjct: 122 MHDVGVVHRDLKPENLLFTDEN------------------------DNLEIKIIDFGFAR 157

Query: 65  YERPDQNY---IVSTRHYRAPEVILGLGWTYPCDIWSVGCIL 103
            + PD         T HY APE++   G+   CD+WS+G IL
Sbjct: 158 LKPPDNQPLKTPCFTLHYAAPELLNQNGYDESCDLWSLGVIL 199

>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A Length = 325

 Score = 41.9 bits (99), Expect = 8e-05
 Identities = 12/39 (30%), Positives = 16/39 (41%), Gaps = 3/39 (7%)

Query: 210 HVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRD 248
           +V   A DL   +QGLL  DP  RL       + +    
Sbjct: 242 NVSQEAKDL---IQGLLTVDPNKRLKMSGLRYNEWLQDG 277

>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C Length = 400

 Score = 73.2 bits (180), Expect = 3e-15
 Identities = 25/101 (24%), Positives = 41/101 (40%), Gaps = 26/101 (25%)

Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           +H + + H D+KPEN+L  S                           ++ +K+ DFG   
Sbjct: 177 LHSINIAHRDVKPENLLYTSKR------------------------PNAILKLTDFGFAK 212

Query: 65  YERPDQNY--IVSTRHYRAPEVILGLGWTYPCDIWSVGCIL 103
                 +      T +Y APEV+    +   CD+WS+G I+
Sbjct: 213 ETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIM 253

>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C Length = 400

 Score = 41.3 bits (97), Expect = 2e-04
 Identities = 11/39 (28%), Positives = 19/39 (48%), Gaps = 3/39 (7%)

Query: 210 HVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRD 248
            V      L   ++ LL+ +PT R+T  E + HP+  + 
Sbjct: 293 EVSEEVKML---IRNLLKTEPTQRMTITEFMNHPWIMQS 328

>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A* Length = 336

 Score = 71.6 bits (176), Expect = 8e-15
 Identities = 27/100 (27%), Positives = 42/100 (42%), Gaps = 25/100 (25%)

Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG-ST 63
           +H   + H D+KPEN+L  S E                        K + +K+ DFG + 
Sbjct: 144 LHSHNIAHRDVKPENLLYTSKE------------------------KDAVLKLTDFGFAK 179

Query: 64  TYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCIL 103
              +        T +Y APEV+    +   CD+WS+G I+
Sbjct: 180 ETTQNALQTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIM 219

>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A* Length = 336

 Score = 40.4 bits (95), Expect = 3e-04
 Identities = 13/39 (33%), Positives = 21/39 (53%), Gaps = 3/39 (7%)

Query: 210 HVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRD 248
            V   A  L   ++ LL+ DPT+RLT  + + HP+  + 
Sbjct: 259 EVSEDAKQL---IRLLLKTDPTERLTITQFMNHPWINQS 294

>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A* Length = 310

 Score = 71.6 bits (176), Expect = 9e-15
 Identities = 30/137 (21%), Positives = 56/137 (40%), Gaps = 35/137 (25%)

Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG-ST 63
           MH   ++H D+KP NV +                             +  +K+ D G   
Sbjct: 152 MHSRRVMHRDIKPANVFIT---------------------------ATGVVKLGDLGLGR 184

Query: 64  TYERPDQ--NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEH 121
            +       + +V T +Y +PE I   G+ +  DIWS+GC+L E+   ++ F   + +  
Sbjct: 185 FFSSKTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYG-DKMNL 243

Query: 122 LAMMERVLG----PLPQ 134
            ++ +++      PLP 
Sbjct: 244 YSLCKKIEQCDYPPLPS 260

>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A* Length = 336

 Score = 71.3 bits (175), Expect = 1e-14
 Identities = 26/113 (23%), Positives = 39/113 (34%), Gaps = 34/113 (30%)

Query: 6   HDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG---- 61
           H   ++H D+K +NVLL                              S   + DFG    
Sbjct: 167 HTRRILHGDVKADNVLL--------------------------SSDGSRAALCDFGHALC 200

Query: 62  ----STTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGE 110
                        +YI  T  + APEV++G       DIWS  C+++ +  G 
Sbjct: 201 LQPDGLGKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGC 253

>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A* Length = 322

 Score = 71.2 bits (175), Expect = 1e-14
 Identities = 33/109 (30%), Positives = 46/109 (42%), Gaps = 30/109 (27%)

Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           +H+  +IH DLKPENVLL S E                        +   IK+ DFG + 
Sbjct: 130 LHENGIIHRDLKPENVLLSSQE------------------------EDCLIKITDFGHSK 165

Query: 65  YERPDQNY--IVSTRHYRAPEVILGL---GWTYPCDIWSVGCIL-VELC 107
                     +  T  Y APEV++ +   G+    D WS+G IL + L 
Sbjct: 166 ILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLS 214

>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A* Length = 322

 Score = 42.3 bits (100), Expect = 7e-05
 Identities = 17/43 (39%), Positives = 23/43 (53%), Gaps = 3/43 (6%)

Query: 210 HVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRDHLRR 252
            V   A DL   ++ LL  DP  R T  EALRHP+   + ++R
Sbjct: 246 EVSEKALDL---VKKLLVVDPKARFTTEEALRHPWLQDEDMKR 285

>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens} Length = 432

 Score = 71.7 bits (176), Expect = 1e-14
 Identities = 27/119 (22%), Positives = 42/119 (35%), Gaps = 32/119 (26%)

Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           +H L ++H DLKP N+L+                 P      K         + DFG   
Sbjct: 134 LHSLNIVHRDLKPHNILISM---------------PNAHGKIK-------AMISDFGLCK 171

Query: 65  YERPDQNY------IVSTRHYRAPEVILGL---GWTYPCDIWSVGCILVE-LCTGEALF 113
                ++       +  T  + APE++        TY  DI+S GC+    +  G   F
Sbjct: 172 KLAVGRHSFSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPF 230

>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens} Length = 432

 Score = 44.8 bits (106), Expect = 1e-05
 Identities = 13/43 (30%), Positives = 23/43 (53%), Gaps = 3/43 (6%)

Query: 209 QHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRDHLR 251
           +H D  A +L   ++ ++  DP  R +A+  L+HPFF     +
Sbjct: 254 KHEDVIAREL---IEKMIAMDPQKRPSAKHVLKHPFFWSLEKQ 293

>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus} Length = 332

 Score = 71.1 bits (174), Expect = 2e-14
 Identities = 29/121 (23%), Positives = 49/121 (40%), Gaps = 21/121 (17%)

Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDY---KSSLHTPKDSSYFKRMPKSSAIKVIDFG 61
           +H   ++H DLKP N+     + +KV D+    +     ++ +    MP  +        
Sbjct: 180 LHSKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYA-------- 231

Query: 62  STTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEH 121
                       V T+ Y +PE I G  +++  DI+S+G IL EL      F T      
Sbjct: 232 -------THTGQVGTKLYMSPEQIHGNNYSHKVDIFSLGLILFELLYS---FSTQMERVR 281

Query: 122 L 122
           +
Sbjct: 282 I 282

>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A Length = 419

 Score = 71.3 bits (175), Expect = 2e-14
 Identities = 33/109 (30%), Positives = 46/109 (42%), Gaps = 30/109 (27%)

Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           +H+  +IH DLKPENVLL S E                        +   IK+ DFG + 
Sbjct: 255 LHENGIIHRDLKPENVLLSSQE------------------------EDCLIKITDFGHSK 290

Query: 65  YERPDQNY--IVSTRHYRAPEVILGL---GWTYPCDIWSVGCIL-VELC 107
                     +  T  Y APEV++ +   G+    D WS+G IL + L 
Sbjct: 291 ILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLS 339

>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A Length = 419

 Score = 43.1 bits (102), Expect = 4e-05
 Identities = 17/43 (39%), Positives = 23/43 (53%), Gaps = 3/43 (6%)

Query: 210 HVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRDHLRR 252
            V   A DL   ++ LL  DP  R T  EALRHP+   + ++R
Sbjct: 371 EVSEKALDL---VKKLLVVDPKARFTTEEALRHPWLQDEDMKR 410

>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens} Length = 317

 Score = 70.9 bits (174), Expect = 2e-14
 Identities = 28/126 (22%), Positives = 44/126 (34%), Gaps = 19/126 (15%)

Query: 3   AVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGS 62
             +H     H DLKP N+LL       + D  S                + A   ++   
Sbjct: 148 EAIHAKGYAHRDLKPTNILLGDEGQPVLMDLGSM---------------NQACIHVEGSR 192

Query: 63  TTYERPDQNYIVSTRHYRAPEVI---LGLGWTYPCDIWSVGCILVELCTGEALFQ-THEN 118
                 D      T  YRAPE+             D+WS+GC+L  +  GE  +    + 
Sbjct: 193 QALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQK 252

Query: 119 LEHLAM 124
            + +A+
Sbjct: 253 GDSVAL 258

>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A Length = 304

 Score = 70.7 bits (174), Expect = 2e-14
 Identities = 27/100 (27%), Positives = 43/100 (43%), Gaps = 25/100 (25%)

Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           +H+  ++H DLKPEN+L ++ E                        ++S I + DFG + 
Sbjct: 122 LHENGIVHRDLKPENLLYLTPE------------------------ENSKIMITDFGLSK 157

Query: 65  YERPDQNY-IVSTRHYRAPEVILGLGWTYPCDIWSVGCIL 103
            E+         T  Y APEV+    ++   D WS+G I 
Sbjct: 158 MEQNGIMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIT 197

>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A Length = 304

 Score = 39.5 bits (93), Expect = 5e-04
 Identities = 13/39 (33%), Positives = 19/39 (48%), Gaps = 3/39 (7%)

Query: 210 HVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRD 248
            +  SA D    +  LL  DP +R T  +AL HP+   +
Sbjct: 233 DISESAKDF---ICHLLEKDPNERYTCEKALSHPWIDGN 268

>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens} Length = 311

 Score = 70.0 bits (172), Expect = 3e-14
 Identities = 23/134 (17%), Positives = 41/134 (30%), Gaps = 31/134 (23%)

Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG-ST 63
           +H   ++H D+KP N+ L                                 K+ DFG   
Sbjct: 173 LHSQGLVHLDVKPANIFL---------------------------GPRGRCKLGDFGLLV 205

Query: 64  TYERPDQNY-IVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHL 122
                           Y APE++ G  +    D++S+G  ++E+     L    E  + L
Sbjct: 206 ELGTAGAGEVQEGDPRYMAPELLQG-SYGTAADVFSLGLTILEVACNMELPHGGEGWQQL 264

Query: 123 AMMERVLGPLPQHM 136
                +       +
Sbjct: 265 -RQGYLPPEFTAGL 277

>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens} Length = 311

 Score = 44.2 bits (105), Expect = 2e-05
 Identities = 10/31 (32%), Positives = 14/31 (45%)

Query: 217 DLTHLLQGLLRYDPTDRLTAREALRHPFFTR 247
           +L  +L  +L  DP  R TA   L  P   +
Sbjct: 280 ELRSVLVMMLEPDPKLRATAEALLALPVLRQ 310

>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X* Length = 348

 Score = 69.4 bits (170), Expect = 5e-14
 Identities = 38/243 (15%), Positives = 64/243 (26%), Gaps = 92/243 (37%)

Query: 11  IHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG-STTYERPD 69
            H D+KP N+L+         D                      +K+ DFG S      D
Sbjct: 174 CHRDVKPSNILM---------DKNGR------------------VKLSDFGESE--YMVD 204

Query: 70  QNYIVS--TRHYRAPEVILGLGWTY--PCDIWSVGCILVELCTGEALFQTHENLEHLAMM 125
           +    S  T  +  PE             DIWS+G  L  +      F    +L      
Sbjct: 205 KKIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLKISL------ 258

Query: 126 ERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVPFFYGSFVE 185
                     +           +R   +++P          +  K               
Sbjct: 259 --------VELFNN--------IRTKNIEYPLDRNHFLYPLTNKKSTCSN---------- 292

Query: 186 FKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFF 245
                                    + +   D    L+  LR +P +R+T+ +AL+H + 
Sbjct: 293 -----------------------NFLSNEDID---FLKLFLRKNPAERITSEDALKHEWL 326

Query: 246 TRD 248
              
Sbjct: 327 ADT 329

>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A* Length = 294

 Score = 68.8 bits (169), Expect = 7e-14
 Identities = 33/128 (25%), Positives = 50/128 (39%), Gaps = 45/128 (35%)

Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG-ST 63
           +H   +IH DLK  N+ L         +    +                  K+ DFG +T
Sbjct: 131 LHRNRVIHRDLKLGNLFL---------NEDLEV------------------KIGDFGLAT 163

Query: 64  TYERPDQ---------NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQ 114
             E   +         NYI       APEV+   G ++  D+WS+GCI+  L  G+  F+
Sbjct: 164 KVEYDGERKKVLCGTPNYI-------APEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFE 216

Query: 115 THENLEHL 122
           T   L+  
Sbjct: 217 T-SCLKET 223

>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A* Length = 335

 Score = 68.9 bits (169), Expect = 8e-14
 Identities = 33/128 (25%), Positives = 50/128 (39%), Gaps = 45/128 (35%)

Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG-ST 63
           +H   +IH DLK  N+ L         +                      +K+ DFG +T
Sbjct: 157 LHRNRVIHRDLKLGNLFL---------NEDLE------------------VKIGDFGLAT 189

Query: 64  TYERPDQ---------NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQ 114
             E   +         NYI       APEV+   G ++  D+WS+GCI+  L  G+  F+
Sbjct: 190 KVEYDGERKKVLCGTPNYI-------APEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFE 242

Query: 115 THENLEHL 122
           T   L+  
Sbjct: 243 T-SCLKET 249

>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens} Length = 337

 Score = 68.6 bits (168), Expect = 1e-13
 Identities = 38/137 (27%), Positives = 48/137 (35%), Gaps = 47/137 (34%)

Query: 3   AVMHDL--CMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDF 60
             MH     +IH DLK EN+LL                                IK+ DF
Sbjct: 150 QHMHRQKPPIIHRDLKVENLLLS---------------------------NQGTIKLCDF 182

Query: 61  GSTTYERPDQNYIVS-----------TRH----YRAPEVI---LGLGWTYPCDIWSVGCI 102
           GS T      +Y  S           TR+    YR PE+I            DIW++GCI
Sbjct: 183 GSATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCI 242

Query: 103 LVELCTGEALFQTHENL 119
           L  LC  +  F+    L
Sbjct: 243 LYLLCFRQHPFEDGAKL 259

>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* Length = 360

 Score = 68.3 bits (167), Expect = 1e-13
 Identities = 48/245 (19%), Positives = 73/245 (29%), Gaps = 74/245 (30%)

Query: 10  MIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG-STTYERP 68
           ++H D+KP N+L+ S                              IK+ DFG S      
Sbjct: 153 IMHRDVKPSNILVNSR---------------------------GEIKLCDFGVSGQLIDS 185

Query: 69  DQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERV 128
             N  V TR Y +PE + G  ++   DIWS+G  LVE+  G       +  E   M    
Sbjct: 186 MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQ 245

Query: 129 LGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKL------PRLQVPFFYGS 182
           +         R         + G    P       +I  ++        P+L    F   
Sbjct: 246 VEGDAAETPPRPRTPGRPLNKFGMDSRP-----PMAIFELLDYIVNEPPPKLPSGVFSLE 300

Query: 183 FVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRH 242
           F +F   C                                   L  +P +R   ++ + H
Sbjct: 301 FQDFVNKC-----------------------------------LIKNPAERADLKQLMVH 325

Query: 243 PFFTR 247
            F  R
Sbjct: 326 AFIKR 330

>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens} Length = 295

 Score = 67.7 bits (166), Expect = 2e-13
 Identities = 30/110 (27%), Positives = 45/110 (40%), Gaps = 31/110 (28%)

Query: 6   HDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGS--- 62
           HD  ++H D+K +NVL+                             S  +K+ DFG+   
Sbjct: 139 HDNQIVHRDIKGDNVLI--------------------------NTYSGVLKISDFGTSKR 172

Query: 63  TTYERPDQNYIVSTRHYRAPEVILGL--GWTYPCDIWSVGCILVELCTGE 110
                P       T  Y APE+I     G+    DIWS+GC ++E+ TG+
Sbjct: 173 LAGINPCTETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGK 222

>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A* Length = 299

 Score = 66.2 bits (162), Expect = 6e-13
 Identities = 30/133 (22%), Positives = 47/133 (35%), Gaps = 17/133 (12%)

Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           +H   ++H DLKP N+     + +KV D+               M +    +     +  
Sbjct: 134 LHSKGLMHRDLKPSNIFFTMDDVVKVGDFGLV----------TAMDQDEEEQ--TVLTPM 181

Query: 65  YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAM 124
                    V T+ Y +PE I G  +++  DI+S+G IL EL      F T         
Sbjct: 182 PAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLYP---FSTQMERVRTLT 238

Query: 125 --MERVLGPLPQH 135
                   PL   
Sbjct: 239 DVRNLKFPPLFTQ 251

>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens} Length = 278

 Score = 65.6 bits (161), Expect = 7e-13
 Identities = 28/128 (21%), Positives = 46/128 (35%), Gaps = 45/128 (35%)

Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG-ST 63
           +H   ++H DL   N+LL             +                  IK+ DFG +T
Sbjct: 128 LHSHGILHRDLTLSNLLL---------TRNMN------------------IKIADFGLAT 160

Query: 64  TYERPDQ---------NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQ 114
             + P +         NYI       +PE+          D+WS+GC+   L  G   F 
Sbjct: 161 QLKMPHEKHYTLCGTPNYI-------SPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFD 213

Query: 115 THENLEHL 122
           T + +++ 
Sbjct: 214 T-DTVKNT 220

>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens} Length = 278

 Score = 39.1 bits (92), Expect = 8e-04
 Identities = 13/33 (39%), Positives = 19/33 (57%)

Query: 217 DLTHLLQGLLRYDPTDRLTAREALRHPFFTRDH 249
           +   L+  LLR +P DRL+    L HPF +R+ 
Sbjct: 238 EAKDLIHQLLRRNPADRLSLSSVLDHPFMSRNS 270

>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A* Length = 298

 Score = 65.4 bits (160), Expect = 1e-12
 Identities = 29/107 (27%), Positives = 41/107 (38%), Gaps = 35/107 (32%)

Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           +H L ++H DLKPEN+LL                                IK+ DFG + 
Sbjct: 140 LHKLNIVHRDLKPENILLDD---------------------------DMNIKLTDFGFSC 172

Query: 65  YERPDQNY--IVSTRHYRAPEVILGL------GWTYPCDIWSVGCIL 103
              P +    +  T  Y APE+I         G+    D+WS G I+
Sbjct: 173 QLDPGEKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIM 219

>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A* Length = 298

 Score = 42.6 bits (101), Expect = 4e-05
 Identities = 14/39 (35%), Positives = 17/39 (43%), Gaps = 3/39 (7%)

Query: 210 HVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRD 248
               +  DL   +   L   P  R TA EAL HPFF + 
Sbjct: 255 DYSDTVKDL---VSRFLVVQPQKRYTAEEALAHPFFQQY 290

>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A Length = 365

 Score = 65.1 bits (159), Expect = 2e-12
 Identities = 26/107 (24%), Positives = 42/107 (39%), Gaps = 35/107 (32%)

Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           +H   ++H DLKPEN+LL                             +  I++ DFG + 
Sbjct: 216 LHANNIVHRDLKPENILLDD---------------------------NMQIRLSDFGFSC 248

Query: 65  YERPDQNY--IVSTRHYRAPEVILGL------GWTYPCDIWSVGCIL 103
           +  P +    +  T  Y APE++         G+    D+W+ G IL
Sbjct: 249 HLEPGEKLRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVIL 295

>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A Length = 365

 Score = 43.2 bits (102), Expect = 4e-05
 Identities = 17/38 (44%), Positives = 22/38 (57%), Gaps = 3/38 (7%)

Query: 210 HVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTR 247
               +  DL   +  LL+ DP  RLTA +AL+HPFF R
Sbjct: 331 DRSSTVKDL---ISRLLQVDPEARLTAEQALQHPFFER 365

>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ... Length = 284

 Score = 64.2 bits (157), Expect = 3e-12
 Identities = 30/125 (24%), Positives = 46/125 (36%), Gaps = 29/125 (23%)

Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
            H+  +IH D+KPEN+L+     +K+ D+  S+H P      +R              T 
Sbjct: 130 CHERKVIHRDIKPENLLMGYKGELKIADFGWSVHAPSL----RRR-------------TM 172

Query: 65  YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAM 124
               D         Y  PE+I G       D+W  G +  E   G   F +     H   
Sbjct: 173 CGTLD---------YLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSP---SHTET 220

Query: 125 MERVL 129
             R++
Sbjct: 221 HRRIV 225

>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ... Length = 284

 Score = 39.1 bits (92), Expect = 7e-04
 Identities = 10/32 (31%), Positives = 15/32 (46%)

Query: 217 DLTHLLQGLLRYDPTDRLTAREALRHPFFTRD 248
               L+  LLRY P  RL  +  + HP+   +
Sbjct: 238 GSKDLISKLLRYHPPQRLPLKGVMEHPWVKAN 269

>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 3lau_A* 2wtv_A* ... Length = 279

 Score = 63.0 bits (154), Expect = 5e-12
 Identities = 31/125 (24%), Positives = 50/125 (40%), Gaps = 29/125 (23%)

Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
            H   +IH D+KPEN+LL S+  +K+ D+  S+H P      +R                
Sbjct: 125 CHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS----RRT-------------DL 167

Query: 65  YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAM 124
               D         Y  PE+I G       D+WS+G +  E   G+  F+ +    +   
Sbjct: 168 CGTLD---------YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN---TYQET 215

Query: 125 MERVL 129
            +R+ 
Sbjct: 216 YKRIS 220

>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 3lau_A* 2wtv_A* ... Length = 279

 Score = 39.5 bits (93), Expect = 5e-04
 Identities = 14/39 (35%), Positives = 21/39 (53%), Gaps = 3/39 (7%)

Query: 210 HVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRD 248
            V   A DL   +  LL+++P+ R   RE L HP+ T +
Sbjct: 229 FVTEGARDL---ISRLLKHNPSQRPMLREVLEHPWITAN 264

>1uu3_A HPDK1, 3-phosphoinositide dependent protein kinase-1; PKB, inhibitor, LY333531, diabetes, cancer, transferase, serine/threonine-protein kinase; HET: SEP LY4; 1.7A {Homo sapiens} SCOP: d.144.1.7 PDB: 1okz_A* 1oky_A* 1uu7_A* 1uu8_A* 2biy_A* 3rwp_A* 2xch_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* ... Length = 310

 Score = 63.4 bits (155), Expect = 6e-12
 Identities = 26/105 (24%), Positives = 45/105 (42%), Gaps = 22/105 (20%)

Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           +H   +IH DLKPEN+LL    +I++ D+ ++          K +            +  
Sbjct: 146 LHGKGIIHRDLKPENILLNEDMHIQITDFGTA----------KVLSP------ESKQARA 189

Query: 65  YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG 109
                    V T  Y +PE++         D+W++GCI+ +L  G
Sbjct: 190 NS------FVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 228

>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A* Length = 576

 Score = 63.7 bits (155), Expect = 8e-12
 Identities = 32/126 (25%), Positives = 55/126 (43%), Gaps = 26/126 (20%)

Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           +H   +++ DLKPEN+LL    +I++ D   +                     +  G T 
Sbjct: 302 LHRERIVYRDLKPENILLDDHGHIRISDLGLA-------------------VHVPEGQTI 342

Query: 65  YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTH-ENLEHLA 123
             R      V T  Y APEV+    +T+  D W++GC+L E+  G++ FQ   + ++   
Sbjct: 343 KGR------VGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREE 396

Query: 124 MMERVL 129
           +   V 
Sbjct: 397 VERLVK 402

>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens} Length = 307

 Score = 62.7 bits (153), Expect = 9e-12
 Identities = 29/116 (25%), Positives = 44/116 (37%), Gaps = 26/116 (22%)

Query: 10  MIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD 69
           +IH DLKP N+LLV+   +                          +K+ DFG+    +  
Sbjct: 126 LIHRDLKPPNLLLVAGGTV--------------------------LKICDFGTACDIQTH 159

Query: 70  QNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMM 125
                 +  + APEV  G  ++  CD++S G IL E+ T    F          M 
Sbjct: 160 MTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIMW 215

>3pvu_A Beta-adrenergic receptor kinase 1; transferase, serine/threonine-protein kinase, ATP-binding, I membrane; HET: QRW; 2.48A {Bos taurus} PDB: 3psc_A* 3pvw_A* 1omw_A 1ym7_A 2bcj_A* 3cik_A 3krw_A* 3krx_A* 1bak_A Length = 695

 Score = 63.4 bits (154), Expect = 1e-11
 Identities = 29/126 (23%), Positives = 52/126 (41%), Gaps = 27/126 (21%)

Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           MH+  +++ DLKP N+LL    ++++ D   +    K                       
Sbjct: 308 MHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKK--------------------KP 347

Query: 65  YERPDQNYIVSTRHYRAPEVIL-GLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLA 123
           +        V T  Y APEV+  G+ +    D +S+GC+L +L  G + F+ H+  +   
Sbjct: 348 HAS------VGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHE 401

Query: 124 MMERVL 129
           +    L
Sbjct: 402 IDRMTL 407

>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B Length = 543

 Score = 63.3 bits (154), Expect = 1e-11
 Identities = 30/126 (23%), Positives = 54/126 (42%), Gaps = 25/126 (19%)

Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           +H   +I+ DLKPENVLL     +++ D                     A+++    + T
Sbjct: 305 LHQRNIIYRDLKPENVLLDDDGNVRISDL------------------GLAVELKAGQTKT 346

Query: 65  YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTH-ENLEHLA 123
                      T  + APE++LG  + +  D +++G  L E+      F+   E +E+  
Sbjct: 347 KGY------AGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKE 400

Query: 124 MMERVL 129
           + +RVL
Sbjct: 401 LKQRVL 406

>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A Length = 328

 Score = 62.3 bits (152), Expect = 1e-11
 Identities = 38/138 (27%), Positives = 54/138 (39%), Gaps = 36/138 (26%)

Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
            H   ++H DLK EN+LL         D   +                  IK+ DFG + 
Sbjct: 130 CHQKRIVHRDLKAENLLL---------DADMN------------------IKIADFGFSN 162

Query: 65  YERPDQNYIVS--TRHYRAPEVILGLGWTYP-CDIWSVGCILVELCTGEALFQTHENLEH 121
                           Y APE+  G  +  P  D+WS+G IL  L +G   F   +NL+ 
Sbjct: 163 EFTVGGKLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD-GQNLK- 220

Query: 122 LAMMERVLG---PLPQHM 136
             + ERVL     +P +M
Sbjct: 221 -ELRERVLRGKYRIPFYM 237

>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens} Length = 335

 Score = 62.4 bits (152), Expect = 1e-11
 Identities = 29/113 (25%), Positives = 45/113 (39%), Gaps = 30/113 (26%)

Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           +    +IH D+K EN+++                      +         IK+IDFGS  
Sbjct: 146 LRLKDIIHRDIKDENIVI-------------------AEDF--------TIKLIDFGSAA 178

Query: 65  YERPDQNYIVS--TRHYRAPEVILGLGWTYP-CDIWSVGCILVELCTGEALFQ 114
           Y    + +     T  Y APEV++G  +  P  ++WS+G  L  L   E  F 
Sbjct: 179 YLERGKLFYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPFC 231

>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens} Length = 312

 Score = 61.9 bits (151), Expect = 2e-11
 Identities = 29/110 (26%), Positives = 43/110 (39%), Gaps = 34/110 (30%)

Query: 6   HDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTY 65
           H   ++H D+K EN+L+                   D        +    K+IDFGS   
Sbjct: 156 HSRGVVHRDIKDENILI-------------------DL-------RRGCAKLIDFGSGAL 189

Query: 66  ERPDQNYIVS--TRHYRAPEVILGLGWTY---PCDIWSVGCILVELCTGE 110
              D+ Y     TR Y  PE I      Y   P  +WS+G +L ++  G+
Sbjct: 190 -LHDEPYTDFDGTRVYSPPEWISRHQ--YHALPATVWSLGILLYDMVCGD 236

>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} Length = 271

 Score = 61.5 bits (150), Expect = 2e-11
 Identities = 30/121 (24%), Positives = 44/121 (36%), Gaps = 23/121 (19%)

Query: 10  MIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD 69
           +IH DLK  N+L+                             +  +K+ DFG        
Sbjct: 129 IIHRDLKSSNILI-------------------LQKVENGDLSNKILKITDFGLAREWHRT 169

Query: 70  QNY-IVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERV 128
                     + APEVI    ++   D+WS G +L EL TGE  F     ++ LA+   V
Sbjct: 170 TKMSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPF---RGIDGLAVAYGV 226

Query: 129 L 129
            
Sbjct: 227 A 227

>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B* Length = 389

 Score = 61.5 bits (149), Expect = 3e-11
 Identities = 35/246 (14%), Positives = 68/246 (27%), Gaps = 53/246 (21%)

Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           +H +  +H  +K  ++L+     + +   +S+       S      +   +         
Sbjct: 144 IHHMGYVHRSVKASHILISVDGKVYLSGLRSN------LSMISHGQRQRVVHDF------ 191

Query: 65  YERPDQNYIVSTRHYRAPEVI--LGLGWTYPCDIWSVGCILVELCTGEA-LFQTHENLEH 121
                  Y V    + +PEV+     G+    DI+SVG    EL  G             
Sbjct: 192 -----PKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMP----- 241

Query: 122 LAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVPFFYG 181
            A   ++L       +  +   +        +      A+     S+             
Sbjct: 242 -AT--QMLLEKLNGTVPCLLDTSTIPAEELTMSPSRSVANSGLSDSLTTSTPRPSNGDSP 298

Query: 182 SFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALR 241
           S    + +   F     +   C                      L+ +P  R +A   L 
Sbjct: 299 SHPYHRTFSPHFH--HFVEQ-C----------------------LQRNPDARPSASTLLN 333

Query: 242 HPFFTR 247
           H FF +
Sbjct: 334 HSFFKQ 339

>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis} Length = 681

 Score = 61.8 bits (150), Expect = 3e-11
 Identities = 26/125 (20%), Positives = 46/125 (36%), Gaps = 37/125 (29%)

Query: 2   FAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG 61
            + +H + +++ DLKPEN++L   +                            +K+ID G
Sbjct: 195 LSYLHSIGLVYNDLKPENIMLTEEQ----------------------------LKLIDLG 226

Query: 62  ---STTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHEN 118
                        Y+  T  ++APE++   G T   DI++VG  L  L            
Sbjct: 227 AVSRIN----SFGYLYGTPGFQAPEIVRT-GPTVATDIYTVGRTLAALTLDLPTR-NGRY 280

Query: 119 LEHLA 123
           ++ L 
Sbjct: 281 VDGLP 285

>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ... Length = 320

 Score = 60.8 bits (148), Expect = 4e-11
 Identities = 28/110 (25%), Positives = 44/110 (40%), Gaps = 34/110 (30%)

Query: 6   HDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTY 65
           H+  ++H D+K EN+L+                   D +  +       +K+IDFGS   
Sbjct: 166 HNCGVLHRDIKDENILI-------------------DLNRGE-------LKLIDFGSGAL 199

Query: 66  ERPDQNYIVS--TRHYRAPEVILGLGWTY---PCDIWSVGCILVELCTGE 110
              D  Y     TR Y  PE I      Y      +WS+G +L ++  G+
Sbjct: 200 L-KDTVYTDFDGTRVYSPPEWIRYHR--YHGRSAAVWSLGILLYDMVCGD 246

>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A Length = 377

 Score = 60.8 bits (147), Expect = 6e-11
 Identities = 18/121 (14%), Positives = 39/121 (32%), Gaps = 43/121 (35%)

Query: 3   AVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGS 62
           A +H   ++HT L+P +++L                            +   + +  F  
Sbjct: 220 ASLHHYGLVHTYLRPVDIVLD---------------------------QRGGVFLTGFEH 252

Query: 63  TTYERPDQNYIVS--TRHYRAPEVILGLGW-----------TYPCDIWSVGCILVELCTG 109
                 D   +VS  +R +  PE+                 T+  D W++G ++  +   
Sbjct: 253 L---VRDGARVVSSVSRGFEPPELEARRATISYHRDRRTLMTFSFDAWALGLVIYWIWCA 309

Query: 110 E 110
           +
Sbjct: 310 D 310

>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A Length = 377

 Score = 46.5 bits (110), Expect = 3e-06
 Identities = 12/42 (28%), Positives = 20/42 (47%)

Query: 206 LIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTR 247
            I +   +    +  LL+G LRY   DRL   +A+  P + +
Sbjct: 324 WIFRSCKNIPQPVRALLEGFLRYPKEDRLLPLQAMETPEYEQ 365

>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ... Length = 276

 Score = 59.9 bits (146), Expect = 7e-11
 Identities = 27/123 (21%), Positives = 49/123 (39%), Gaps = 37/123 (30%)

Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG-ST 63
           +H + + H D+KPEN+LL                   D            +K+ DFG +T
Sbjct: 121 LHGIGITHRDIKPENLLL-------------------DERD--------NLKISDFGLAT 153

Query: 64  TYERPDQNYIVSTR----HYRAPEVILGLGWTY---PCDIWSVGCILVELCTGEALFQTH 116
            +   ++  +++       Y APE++      +   P D+WS G +L  +  GE  +   
Sbjct: 154 VFRYNNRERLLNKMCGTLPYVAPELLKRRE--FHAEPVDVWSCGIVLTAMLAGELPWDQP 211

Query: 117 ENL 119
            + 
Sbjct: 212 SDS 214

>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A* Length = 323

 Score = 59.2 bits (144), Expect = 1e-10
 Identities = 27/123 (21%), Positives = 49/123 (39%), Gaps = 37/123 (30%)

Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG-ST 63
           +H + + H D+KPEN+LL                   D            +K+ DFG +T
Sbjct: 121 LHGIGITHRDIKPENLLL-------------------DERD--------NLKISDFGLAT 153

Query: 64  TYERPDQNYIVSTR----HYRAPEVILGLGWTY---PCDIWSVGCILVELCTGEALFQTH 116
            +   ++  +++       Y APE++      +   P D+WS G +L  +  GE  +   
Sbjct: 154 VFRYNNRERLLNKMCGTLPYVAPELLKRRE--FHAEPVDVWSCGIVLTAMLAGELPWDQP 211

Query: 117 ENL 119
            + 
Sbjct: 212 SDS 214

>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A* Length = 287

 Score = 58.9 bits (143), Expect = 1e-10
 Identities = 24/117 (20%), Positives = 40/117 (34%), Gaps = 27/117 (23%)

Query: 10  MIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD 69
           ++H DL+  N+ L S +                             KV DFG +      
Sbjct: 145 IVHRDLRSPNIFLQSLD----------------------ENAPVCAKVADFGLSQQSVHS 182

Query: 70  QNYIVSTRHYRAPEVILGLGWTY--PCDIWSVGCILVELCTGEALFQTHENLEHLAM 124
            + ++    + APE I     +Y    D +S   IL  + TGE  F   +   +  +
Sbjct: 183 VSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPF---DEYSYGKI 236

>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens} Length = 298

 Score = 58.8 bits (143), Expect = 2e-10
 Identities = 24/112 (21%), Positives = 39/112 (34%), Gaps = 37/112 (33%)

Query: 6   HDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG-STT 64
           H   +IH D+KP N+L+                                IK+ DFG S  
Sbjct: 154 HYQKIIHRDIKPSNLLV-------------------GEDG--------HIKIADFGVSNE 186

Query: 65  YERPDQNYIVSTR----HYRAPEVILGLGWTY---PCDIWSVGCILVELCTG 109
           ++  D   ++S       + APE +      +     D+W++G  L     G
Sbjct: 187 FKGSDA--LLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFG 236

>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe} Length = 336

 Score = 58.8 bits (143), Expect = 2e-10
 Identities = 34/138 (24%), Positives = 53/138 (38%), Gaps = 36/138 (26%)

Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
            H   ++H DLKPEN+LL         D   +                  +K+ DFG + 
Sbjct: 124 CHRHKIVHRDLKPENLLL---------DDNLN------------------VKIADFGLSN 156

Query: 65  YERPDQNYIVS--TRHYRAPEVILGLGWTYP-CDIWSVGCILVELCTGEALFQTHENLEH 121
                     S  + +Y APEVI G  +  P  D+WS G +L  +  G   F   E +  
Sbjct: 157 IMTDGNFLKTSCGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFD-DEFIP- 214

Query: 122 LAMMERVLG---PLPQHM 136
             + ++V      +P  +
Sbjct: 215 -NLFKKVNSCVYVMPDFL 231

>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} Length = 413

 Score = 58.9 bits (142), Expect = 2e-10
 Identities = 13/121 (10%), Positives = 33/121 (27%), Gaps = 36/121 (29%)

Query: 3   AVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGS 62
           A +H   ++HT L+P +++L                            +   + +  F  
Sbjct: 225 ASLHHYGLVHTYLRPVDIVLD---------------------------QRGGVFLTGFEH 257

Query: 63  TTYE----RPDQNYIVSTRHYRAPEVILGLG-----WTYPCDIWSVGCILVELCTGEALF 113
              +            +     A  ++          T+  D W++G  +  +   +   
Sbjct: 258 LVRDGASAVSPIGRGFAPPETTAERMLPFGQHHPTLMTFAFDTWTLGLAIYWIWCADLPN 317

Query: 114 Q 114
            
Sbjct: 318 T 318

>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} Length = 413

 Score = 44.3 bits (104), Expect = 2e-05
 Identities = 12/42 (28%), Positives = 20/42 (47%)

Query: 206 LIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTR 247
            I +   +    +  LL+G LRY   DRL   +A+  P + +
Sbjct: 328 WIFRSCKNIPQPVRALLEGFLRYPKEDRLLPLQAMETPEYEQ 369

>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A* Length = 410

 Score = 58.9 bits (143), Expect = 2e-10
 Identities = 32/113 (28%), Positives = 49/113 (43%), Gaps = 27/113 (23%)

Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           +H +  IH D+KP+N+LL  S ++K+ D+ +            +M K   ++      T 
Sbjct: 184 IHSMGFIHRDVKPDNMLLDKSGHLKLADFGTC----------MKMNKEGMVRCDTAVGT- 232

Query: 65  YERPDQNYIVSTRHYRAPEVILGLGWTYP----CDIWSVGCILVELCTGEALF 113
              PD         Y +PEV+   G        CD WSVG  L E+  G+  F
Sbjct: 233 ---PD---------YISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPF 273

>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A* Length = 276

 Score = 58.0 bits (141), Expect = 3e-10
 Identities = 38/140 (27%), Positives = 57/140 (40%), Gaps = 40/140 (28%)

Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
            H   ++H DLKPENVLL         D   +                   K+ DFG + 
Sbjct: 127 CHRHMVVHRDLKPENVLL---------DAHMN------------------AKIADFGLSN 159

Query: 65  YERPDQNYIVSTR----HYRAPEVILGLGWTYP-CDIWSVGCILVELCTGEALFQTHENL 119
                +   + T     +Y APEVI G  +  P  DIWS G IL  L  G   F   E++
Sbjct: 160 MMSDGE--FLRTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFD-DEHV 216

Query: 120 EHLAMMERVLG---PLPQHM 136
               + +++ G    +P+++
Sbjct: 217 P--TLFKKIRGGVFYIPEYL 234

>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens} Length = 412

 Score = 58.6 bits (142), Expect = 3e-10
 Identities = 28/132 (21%), Positives = 52/132 (39%), Gaps = 33/132 (25%)

Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           +H L  +H D+KP+N+LL    +I++ D+ S L                  K+   G+  
Sbjct: 178 VHRLGYVHRDIKPDNILLDRCGHIRLADFGSCL------------------KLRADGTVR 219

Query: 65  YERPDQNYIVSTRHYRAPEVILGLGWTY-------PCDIWSVGCILVELCTGEALFQTHE 117
                    V T  Y +PE++  +G           CD W++G    E+  G+  F   +
Sbjct: 220 -----SLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPF-YAD 273

Query: 118 NLEHLAMMERVL 129
           +        +++
Sbjct: 274 STA--ETYGKIV 283

>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens} Length = 305

 Score = 58.0 bits (141), Expect = 4e-10
 Identities = 27/126 (21%), Positives = 45/126 (35%), Gaps = 37/126 (29%)

Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG-ST 63
           +H   ++H D+KP N+LL             +                  +K+   G + 
Sbjct: 125 LHSQGIVHKDIKPGNLLL---------TTGGT------------------LKISALGVAE 157

Query: 64  TYERPDQNYIVSTR----HYRAPEVILGLGWTY---PCDIWSVGCILVELCTGEALFQTH 116
                  +    T      ++ PE+  GL  T+     DIWS G  L  + TG   F+  
Sbjct: 158 ALHPFAADDTCRTSQGSPAFQPPEIANGLD-TFSGFKVDIWSAGVTLYNITTGLYPFE-G 215

Query: 117 ENLEHL 122
           +N+  L
Sbjct: 216 DNIYKL 221

>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A* Length = 437

 Score = 58.2 bits (141), Expect = 5e-10
 Identities = 28/130 (21%), Positives = 56/130 (43%), Gaps = 31/130 (23%)

Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           +H L  +H D+KP+N+L+  + +I++ D+ S            ++ +   ++      T 
Sbjct: 191 VHQLHYVHRDIKPDNILMDMNGHIRLADFGSC----------LKLMEDGTVQSSVAVGT- 239

Query: 65  YERPDQNYIVSTRHYRAPEVILGL-----GWTYPCDIWSVGCILVELCTGEALFQTHENL 119
              PD         Y +PE++  +      +   CD WS+G  + E+  GE  F   E+L
Sbjct: 240 ---PD---------YISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPF-YAESL 286

Query: 120 EHLAMMERVL 129
                  +++
Sbjct: 287 V--ETYGKIM 294

>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus} Length = 476

 Score = 57.9 bits (140), Expect = 6e-10
 Identities = 37/140 (26%), Positives = 55/140 (39%), Gaps = 40/140 (28%)

Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
            H   ++H DLKPENVLL         D   +                   K+ DFG + 
Sbjct: 132 CHRHMVVHRDLKPENVLL---------DAHMN------------------AKIADFGLSN 164

Query: 65  YERPDQNYIVSTR----HYRAPEVILGLGWTYP-CDIWSVGCILVELCTGEALFQTHENL 119
                +   + T     +Y APEVI G  +  P  DIWS G IL  L  G   F   +++
Sbjct: 165 MMSDGE--FLRTSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFD-DDHV 221

Query: 120 EHLAMMERVLG---PLPQHM 136
               + +++       PQ++
Sbjct: 222 P--TLFKKICDGIFYTPQYL 239

>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 3fpq_A Length = 290

 Score = 57.0 bits (138), Expect = 7e-10
 Identities = 19/106 (17%), Positives = 39/106 (36%), Gaps = 28/106 (26%)

Query: 6   HDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG-STT 64
               +IH DLK +N+ +                             + ++K+ D G +T 
Sbjct: 148 RTPPIIHRDLKCDNIFI--------------------------TGPTGSVKIGDLGLATL 181

Query: 65  YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGE 110
                   ++ T  + APE+     +    D+++ G  ++E+ T E
Sbjct: 182 KRASFAKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSE 226

>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A Length = 361

 Score = 57.0 bits (138), Expect = 1e-09
 Identities = 30/107 (28%), Positives = 39/107 (36%), Gaps = 28/107 (26%)

Query: 6   HDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTY 65
           H + + H DLK EN LL                   D S   R      +K+ DFG +  
Sbjct: 133 HSMQICHRDLKLENTLL-------------------DGSPAPR------LKICDFGYSKS 167

Query: 66  ERPDQ--NYIVSTRHYRAPEVILGLGWTYP-CDIWSVGCILVELCTG 109
                     V T  Y APEV+L   +     D+WS G  L  +  G
Sbjct: 168 SVLHSQPKSTVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVG 214

>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A* Length = 299

 Score = 56.5 bits (137), Expect = 1e-09
 Identities = 22/99 (22%), Positives = 35/99 (35%), Gaps = 43/99 (43%)

Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           +H + + H D+KPEN+L  S                           ++ +K+ DFG   
Sbjct: 133 LHSINIAHRDVKPENLLYTSKR------------------------PNAILKLTDFG--- 165

Query: 65  YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCIL 103
                           A E   G  +   CD+WS+G I+
Sbjct: 166 ---------------FAKET-TGEKYDKSCDMWSLGVIM 188

>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A* Length = 299

 Score = 41.1 bits (97), Expect = 2e-04
 Identities = 11/39 (28%), Positives = 19/39 (48%), Gaps = 3/39 (7%)

Query: 210 HVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRD 248
            V      L   ++ LL+ +PT R+T  E + HP+  + 
Sbjct: 228 EVSEEVKML---IRNLLKTEPTQRMTITEFMNHPWIMQS 263

>3g51_A Ribosomal protein S6 kinase alpha-3; N-terminal kinase domain of P90 ribosomal S6 kinase 2, ATP- binding, nucleotide-binding, phosphoprotein; HET: ANP; 1.80A {Mus musculus} PDB: 2z7q_A* 2z7r_A* 2z7s_A* Length = 325

 Score = 56.0 bits (136), Expect = 2e-09
 Identities = 42/134 (31%), Positives = 57/134 (42%), Gaps = 30/134 (22%)

Query: 6   HDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTY 65
           H L +I+ DLKPEN+LL    +IK+ D+  S    K+S              ID     Y
Sbjct: 143 HSLGIIYRDLKPENILLDEEGHIKLTDFGLS----KES--------------IDHEKKAY 184

Query: 66  ERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMM 125
                     T  Y APEV+   G T   D WS G ++ E+ TG   FQ  +  E    M
Sbjct: 185 S------FCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKE---TM 235

Query: 126 ERVLG---PLPQHM 136
             +L     +PQ +
Sbjct: 236 TMILKAKLGMPQFL 249

>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A* Length = 327

 Score = 56.0 bits (136), Expect = 2e-09
 Identities = 35/134 (26%), Positives = 61/134 (45%), Gaps = 30/134 (22%)

Query: 6   HDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTY 65
           H   +I+ DLKPEN++L    ++K+ D+       K+S              I  G+ T+
Sbjct: 138 HQKGIIYRDLKPENIMLNHQGHVKLTDFGLC----KES--------------IHDGTVTH 179

Query: 66  ERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMM 125
                     T  Y APE+++  G     D WS+G ++ ++ TG   F T EN +    +
Sbjct: 180 T------FCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPF-TGENRK--KTI 230

Query: 126 ERVLG---PLPQHM 136
           +++L     LP ++
Sbjct: 231 DKILKCKLNLPPYL 244

>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens} Length = 384

 Score = 55.8 bits (135), Expect = 3e-09
 Identities = 23/128 (17%), Positives = 48/128 (37%), Gaps = 28/128 (21%)

Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           + +  +IH D+KP+N+LL    ++ + D+  +                    ++   +  
Sbjct: 131 LQNQRIIHRDMKPDNILLDEHGHVHITDFNIA-------------------AMLPRETQI 171

Query: 65  YERPDQNYIVSTRHYRAPEVIL---GLGWTYPCDIWSVGCILVELCTGEALFQTHENLEH 121
                   +  T+ Y APE+     G G+++  D WS+G    EL  G   +    +   
Sbjct: 172 TT------MAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTSS 225

Query: 122 LAMMERVL 129
             ++    
Sbjct: 226 KEIVHTFE 233

>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A* Length = 345

 Score = 54.9 bits (133), Expect = 4e-09
 Identities = 31/115 (26%), Positives = 52/115 (45%), Gaps = 24/115 (20%)

Query: 6   HDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTY 65
           H+  +I+ DLK +NVLL S  +IK+ DY               M K      +  G TT 
Sbjct: 127 HERGIIYRDLKLDNVLLDSEGHIKLTDYG--------------MCKEG----LRPGDTT- 167

Query: 66  ERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLE 120
                +    T +Y APE++ G  + +  D W++G ++ E+  G + F    + +
Sbjct: 168 -----STFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSD 217

>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A* Length = 297

 Score = 54.6 bits (132), Expect = 5e-09
 Identities = 28/109 (25%), Positives = 48/109 (44%), Gaps = 30/109 (27%)

Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGST- 63
           +H   +IH D+K +N+LL                               ++K+ DFG   
Sbjct: 132 LHSNQVIHRDIKSDNILLGMD---------------------------GSVKLTDFGFCA 164

Query: 64  --TYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGE 110
             T E+  ++ +V T ++ APEV+    +    DIWS+G + +E+  GE
Sbjct: 165 QITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGE 213

>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus} Length = 396

 Score = 55.0 bits (133), Expect = 5e-09
 Identities = 31/115 (26%), Positives = 51/115 (44%), Gaps = 24/115 (20%)

Query: 6   HDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTY 65
           H+  +I+ DLK +NVLL S  +IK+ DY               M K      +  G TT 
Sbjct: 170 HERGIIYRDLKLDNVLLDSEGHIKLTDYG--------------MCKEG----LRPGDTTS 211

Query: 66  ERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLE 120
                     T +Y APE++ G  + +  D W++G ++ E+  G + F    + +
Sbjct: 212 T------FCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSD 260

>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ... Length = 337

 Score = 54.9 bits (133), Expect = 5e-09
 Identities = 33/133 (24%), Positives = 54/133 (40%), Gaps = 28/133 (21%)

Query: 6   HDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTY 65
           H   +++ D+K EN++L    +IK+ D+               + K      I  G+T  
Sbjct: 122 HSRDVVYRDIKLENLMLDKDGHIKITDF--------------GLCKEG----ISDGATM- 162

Query: 66  ERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALF--QTHENLEHLA 123
                     T  Y APEV+    +    D W +G ++ E+  G   F  Q HE L  L 
Sbjct: 163 -----KTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELI 217

Query: 124 MMERVLGPLPQHM 136
           +ME +    P+ +
Sbjct: 218 LMEEI--RFPRTL 228

>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis} Length = 309

 Score = 54.2 bits (131), Expect = 7e-09
 Identities = 28/115 (24%), Positives = 41/115 (35%), Gaps = 35/115 (30%)

Query: 6   HDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG---- 61
           H     H D+KPEN+L+                +  D              ++DFG    
Sbjct: 151 HAAGATHRDVKPENILV----------------SADD-----------FAYLVDFGIASA 183

Query: 62  --STTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQ 114
                  +      V T +Y APE       TY  DI+++ C+L E  TG   +Q
Sbjct: 184 TTDEKLTQL--GNTVGTLYYMAPERFSESHATYRADIYALTCVLYECLTGSPPYQ 236

>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A* Length = 321

 Score = 54.3 bits (131), Expect = 8e-09
 Identities = 27/109 (24%), Positives = 47/109 (43%), Gaps = 30/109 (27%)

Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG--- 61
           +H   +IH D+K +++LL                                +K+ DFG   
Sbjct: 157 LHAQGVIHRDIKSDSILLTLD---------------------------GRVKLSDFGFCA 189

Query: 62  STTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGE 110
             + + P +  +V T ++ APEVI    +    DIWS+G +++E+  GE
Sbjct: 190 QISKDVPKRKSLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGE 238

>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7 Length = 355

 Score = 54.2 bits (131), Expect = 8e-09
 Identities = 38/137 (27%), Positives = 58/137 (42%), Gaps = 29/137 (21%)

Query: 6   HDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTY 65
           H L +I+ D+K EN+LL S+ ++ + D+  S    K+              V D     Y
Sbjct: 176 HKLGIIYRDIKLENILLDSNGHVVLTDFGLS----KEF-------------VADETERAY 218

Query: 66  ERPDQNYIVSTRHYRAPEVILGL--GWTYPCDIWSVGCILVELCTGEALFQT-HENLEHL 122
           +         T  Y AP+++ G   G     D WS+G ++ EL TG + F    E     
Sbjct: 219 D------FCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQA 272

Query: 123 AMMERVLG---PLPQHM 136
            +  R+L    P PQ M
Sbjct: 273 EISRRILKSEPPYPQEM 289

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A* Length = 309

 Score = 53.9 bits (130), Expect = 1e-08
 Identities = 29/122 (23%), Positives = 45/122 (36%), Gaps = 33/122 (27%)

Query: 10  MIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD 69
           ++H +LK  N+L+                   D  Y         +KV DFG +  +   
Sbjct: 160 IVHRNLKSPNLLV-------------------DKKY--------TVKVCDFGLSRLKAST 192

Query: 70  QNYIVS---TRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMME 126
                S   T  + APEV+         D++S G IL EL T +  +    NL    ++ 
Sbjct: 193 FLSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPW---GNLNPAQVVA 249

Query: 127 RV 128
            V
Sbjct: 250 AV 251

>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A* Length = 446

 Score = 53.6 bits (129), Expect = 1e-08
 Identities = 33/129 (25%), Positives = 53/129 (41%), Gaps = 28/129 (21%)

Query: 10  MIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD 69
           +++ DLK EN++L    +IK+ D+               + K      I  G+T      
Sbjct: 270 VVYRDLKLENLMLDKDGHIKITDF--------------GLCKEG----IKDGATM----- 306

Query: 70  QNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALF--QTHENLEHLAMMER 127
                 T  Y APEV+    +    D W +G ++ E+  G   F  Q HE L  L +ME 
Sbjct: 307 -KTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEE 365

Query: 128 VLGPLPQHM 136
           +    P+ +
Sbjct: 366 I--RFPRTL 372

>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A* Length = 345

 Score = 53.4 bits (129), Expect = 1e-08
 Identities = 29/111 (26%), Positives = 48/111 (43%), Gaps = 30/111 (27%)

Query: 6   HDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTY 65
           H   +++ DLK +N+LL    +IK+ D+               M K +    +   + T 
Sbjct: 135 HSKGIVYRDLKLDNILLDKDGHIKIADFG--------------MCKEN----MLGDAKTN 176

Query: 66  E---RPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALF 113
                PD         Y APE++LG  + +  D WS G +L E+  G++ F
Sbjct: 177 TFCGTPD---------YIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPF 218

>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A Length = 674

 Score = 53.9 bits (129), Expect = 2e-08
 Identities = 34/135 (25%), Positives = 56/135 (41%), Gaps = 30/135 (22%)

Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           +    +I+ DLK +NV+L S  +IK+ D+               M K +    I  G TT
Sbjct: 458 LQSKGIIYRDLKLDNVMLDSEGHIKIADFG--------------MCKEN----IWDGVTT 499

Query: 65  YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAM 124
                      T  Y APE+I    +    D W+ G +L E+  G+A F+  +  E   +
Sbjct: 500 ------KTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDE---L 550

Query: 125 MERVLG---PLPQHM 136
            + ++      P+ M
Sbjct: 551 FQSIMEHNVAYPKSM 565

>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ... Length = 350

 Score = 53.4 bits (129), Expect = 2e-08
 Identities = 33/135 (24%), Positives = 55/135 (40%), Gaps = 33/135 (24%)

Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           +H L +I+ DLKPEN+L+    YI+V                            DFG   
Sbjct: 157 LHSLDLIYRDLKPENLLIDQQGYIQV---------------------------TDFGFAK 189

Query: 65  YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAM 124
             +     +  T    APE+IL  G+    D W++G ++ E+  G   F   +    + +
Sbjct: 190 RVKGRTWTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF-FADQ--PIQI 246

Query: 125 MERVL-GPL--PQHM 136
            E+++ G +  P H 
Sbjct: 247 YEKIVSGKVRFPSHF 261

>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens} Length = 314

 Score = 52.7 bits (127), Expect = 3e-08
 Identities = 28/109 (25%), Positives = 44/109 (40%), Gaps = 30/109 (27%)

Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGST- 63
           +H +  IH D+K  N+LL +                               K+ DFG   
Sbjct: 141 LHFMRKIHRDIKAGNILLNT---------------------------EGHAKLADFGVAG 173

Query: 64  --TYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGE 110
             T     +N ++ T  + APEVI  +G+    DIWS+G   +E+  G+
Sbjct: 174 QLTDTMAKRNTVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGK 222

>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A* Length = 303

 Score = 52.3 bits (126), Expect = 3e-08
 Identities = 32/116 (27%), Positives = 43/116 (37%), Gaps = 31/116 (26%)

Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG--- 61
           +H    IH D+K  NVLL                                +K+ DFG   
Sbjct: 135 LHSEKKIHRDIKAANVLLSEH---------------------------GEVKLADFGVAG 167

Query: 62  STTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEA-LFQTH 116
             T  +  +N  V T  + APEVI    +    DIWS+G   +EL  GE    + H
Sbjct: 168 QLTDTQIKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELH 223

>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A* Length = 311

 Score = 52.3 bits (126), Expect = 3e-08
 Identities = 27/111 (24%), Positives = 45/111 (40%), Gaps = 33/111 (29%)

Query: 6   HDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG---- 61
           H   +IH D+KP N++                           +  ++A+KV+DFG    
Sbjct: 133 HQNGIIHRDVKPANIM---------------------------ISATNAVKVMDFGIARA 165

Query: 62  --STTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGE 110
              +         ++ T  Y +PE   G       D++S+GC+L E+ TGE
Sbjct: 166 IADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGE 216

>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp} Length = 294

 Score = 52.2 bits (126), Expect = 3e-08
 Identities = 27/111 (24%), Positives = 47/111 (42%), Gaps = 35/111 (31%)

Query: 6   HDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG---- 61
           HD+ ++H D+KP+N+L                           +  +  +K+ DFG    
Sbjct: 128 HDMRIVHRDIKPQNIL---------------------------IDSNKTLKIFDFGIAKA 160

Query: 62  --STTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGE 110
              T+  +   N+++ T  Y +PE   G       DI+S+G +L E+  GE
Sbjct: 161 LSETSLTQT--NHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGE 209

>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A* Length = 353

 Score = 52.2 bits (126), Expect = 3e-08
 Identities = 31/108 (28%), Positives = 45/108 (41%), Gaps = 24/108 (22%)

Query: 6   HDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTY 65
               +I+ DLK +NV+L S  +IK+ D+               M K +    I  G TT 
Sbjct: 138 QSKGIIYRDLKLDNVMLDSEGHIKIADFG--------------MCKEN----IWDGVTT- 178

Query: 66  ERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALF 113
                     T  Y APE+I    +    D W+ G +L E+  G+A F
Sbjct: 179 -----KTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPF 221

>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens} Length = 353

 Score = 52.2 bits (126), Expect = 3e-08
 Identities = 34/134 (25%), Positives = 53/134 (39%), Gaps = 30/134 (22%)

Query: 6   HDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTY 65
           HD  +I+ DLK +NVLL    + K+ D+               M K      I  G TT 
Sbjct: 141 HDKGIIYRDLKLDNVLLDHEGHCKLADFG--------------MCKEG----ICNGVTT- 181

Query: 66  ERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMM 125
                     T  Y APE++  + +    D W++G +L E+  G A F+     +   + 
Sbjct: 182 -----ATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAENEDD---LF 233

Query: 126 ERVLG---PLPQHM 136
           E +L      P  +
Sbjct: 234 EAILNDEVVYPTWL 247

>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A* Length = 373

 Score = 51.9 bits (125), Expect = 6e-08
 Identities = 36/134 (26%), Positives = 56/134 (41%), Gaps = 30/134 (22%)

Query: 6   HDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTY 65
           H L +++ DLKPEN+LL S  +I + D+               + K +    I+  STT 
Sbjct: 156 HSLNIVYRDLKPENILLDSQGHIVLTDFG--------------LCKEN----IEHNSTTS 197

Query: 66  ERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMM 125
                     T  Y APEV+    +    D W +G +L E+  G   F +    E   M 
Sbjct: 198 T------FCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAE---MY 248

Query: 126 ERVL-GPL--PQHM 136
           + +L  PL    ++
Sbjct: 249 DNILNKPLQLKPNI 262

>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A* Length = 342

 Score = 51.3 bits (123), Expect = 7e-08
 Identities = 30/172 (17%), Positives = 59/172 (34%), Gaps = 32/172 (18%)

Query: 6   HDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTY 65
               + H DLK +N+L+  +    + D   ++     +      P               
Sbjct: 164 GKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHR------------ 211

Query: 66  ERPDQNYIVSTRHYRAPEVILGLGWTYP------CDIWSVGCILVELCTGEALFQTHENL 119
                   V T+ Y APEV+               DI+++G +  E+    ++   HE+ 
Sbjct: 212 --------VGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDY 263

Query: 120 EHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKL 171
           +          P  + M K V        ++ R + P    S E+++ + K+
Sbjct: 264 QLPYYDLVPSDPSVEEMRKVV------CEQKLRPNIPNRWQSCEALRVMAKI 309

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} PDB: 3c4c_A* 3c4d_A* 3idp_A* 3ii5_A* 3d4q_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 2fb8_A* 4dbn_A* 1uwj_A* 1uwh_A* 3q96_A* Length = 289

 Score = 50.4 bits (121), Expect = 1e-07
 Identities = 25/124 (20%), Positives = 44/124 (35%), Gaps = 35/124 (28%)

Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG--- 61
           +H   +IH DLK  N + +  +                            +K+ DFG   
Sbjct: 136 LHAKSIIHRDLKSNN-IFLHEDNT--------------------------VKIGDFGLAT 168

Query: 62  --STTYERPDQNYIVSTRHYRAPEVILGLGW---TYPCDIWSVGCILVELCTGEALFQTH 116
             S          +  +  + APEVI        ++  D+++ G +L EL TG+  +   
Sbjct: 169 EKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNI 228

Query: 117 ENLE 120
            N +
Sbjct: 229 NNRD 232

>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens} Length = 318

 Score = 50.1 bits (120), Expect = 2e-07
 Identities = 29/110 (26%), Positives = 41/110 (37%), Gaps = 30/110 (27%)

Query: 6   HDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTY 65
               +IH D+KP N+LL     IK+ D+  S           R+    A           
Sbjct: 142 EKHGVIHRDVKPSNILLDERGQIKLCDFGIS----------GRLVDDKA----------- 180

Query: 66  ERPDQNYIVSTRHYRAPEVI-----LGLGWTYPCDIWSVGCILVELCTGE 110
               ++       Y APE I         +    D+WS+G  LVEL TG+
Sbjct: 181 ----KDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQ 226

>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7 Length = 318

 Score = 49.8 bits (120), Expect = 2e-07
 Identities = 38/144 (26%), Positives = 51/144 (35%), Gaps = 51/144 (35%)

Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG--- 61
           +H   +I+ DLKPEN+LL         D     H                IK+ DFG   
Sbjct: 122 LHSKDIIYRDLKPENILL---------DKNG--H----------------IKITDFGFAK 154

Query: 62  ---STTYER---PDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQT 115
                TY     PD         Y APEV+    +    D WS G ++ E+  G   F  
Sbjct: 155 YVPDVTYTLCGTPD---------YIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPF-Y 204

Query: 116 HENLEHLAMMERVL-GPL--PQHM 136
             N   +   E++L   L  P   
Sbjct: 205 DSN--TMKTYEKILNAELRFPPFF 226

>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A Length = 290

 Score = 49.2 bits (118), Expect = 3e-07
 Identities = 25/105 (23%), Positives = 39/105 (37%), Gaps = 29/105 (27%)

Query: 10  MIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD 69
           +IH D+KP NVL+ +   +K+ D+  S            +    A               
Sbjct: 131 VIHRDVKPSNVLINALGQVKMCDFGIS----------GYLVDDVA-------KDID---- 169

Query: 70  QNYIVSTRHYRAPEVILG----LGWTYPCDIWSVGCILVELCTGE 110
                  + Y APE I       G++   DIWS+G  ++EL    
Sbjct: 170 ----AGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILR 210

>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A* Length = 301

 Score = 48.1 bits (115), Expect = 7e-07
 Identities = 26/125 (20%), Positives = 39/125 (31%), Gaps = 40/125 (32%)

Query: 9   CMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG------- 61
            + H DLK +N+L+           K +                    + D G       
Sbjct: 133 AIAHRDLKSKNILV-----------KKNGQ----------------CCIADLGLAVMHSQ 165

Query: 62  STTYERPDQNYIVSTRHYRAPEVILGLGWTYP------CDIWSVGCILVELCTGEALFQT 115
           ST       N  V T+ Y APEV+               DIW+ G +L E+         
Sbjct: 166 STNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGI 225

Query: 116 HENLE 120
            E+ +
Sbjct: 226 VEDYK 230

>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens} Length = 310

 Score = 48.1 bits (115), Expect = 8e-07
 Identities = 23/108 (21%), Positives = 41/108 (37%), Gaps = 16/108 (14%)

Query: 6   HDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYF---KRMPKSSAIKVIDFGS 62
           H + +IH DL   N L+  ++ + V D             F   + M             
Sbjct: 125 HSMNIIHRDLNSHNCLVRENKNVVVAD-------------FGLARLMVDEKTQPEGLRSL 171

Query: 63  TTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGE 110
              +R  +  +V   ++ APE+I G  +    D++S G +L E+    
Sbjct: 172 KKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRV 219

>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} Length = 337

 Score = 47.8 bits (114), Expect = 1e-06
 Identities = 36/181 (19%), Positives = 55/181 (30%), Gaps = 56/181 (30%)

Query: 9   CMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG------- 61
            + H DLK +N+L+           K +                    + D G       
Sbjct: 162 AIAHRDLKSKNILV-----------KKNGT----------------CCIADLGLAVKFIS 194

Query: 62  STTYERPDQNYIVSTRHYRAPEVILGLGWTYP------CDIWSVGCILVELCTGEALFQT 115
            T       N  V T+ Y  PEV+               D++S G IL E+         
Sbjct: 195 DTNEVDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVARRCVSGGI 254

Query: 116 HENLEHLAMMERVLGPLPQHMLKRVDRHAEKYV-----RRGRLDWPEGAASRESIKSVMK 170
            E  +           LP H L   D   E        ++ R  +P   +S E ++ + K
Sbjct: 255 VEEYQ-----------LPYHDLVPSDPSYEDMREIVCIKKLRPSFPNRWSSDECLRQMGK 303

Query: 171 L 171
           L
Sbjct: 304 L 304

>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A* Length = 327

 Score = 47.3 bits (113), Expect = 1e-06
 Identities = 30/106 (28%), Positives = 39/106 (36%), Gaps = 33/106 (31%)

Query: 11  IHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTY--ERP 68
           IH D+KP N+LL  S                             IK+ DFG +    +  
Sbjct: 148 IHRDIKPSNILLDRS---------------------------GNIKLCDFGISGQLVDSI 180

Query: 69  DQNYIVSTRHYRAPEVI----LGLGWTYPCDIWSVGCILVELCTGE 110
            +      R Y APE I       G+    D+WS+G  L EL TG 
Sbjct: 181 AKTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGR 226

>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 2qlu_A* Length = 322

 Score = 47.4 bits (113), Expect = 1e-06
 Identities = 32/178 (17%), Positives = 57/178 (32%), Gaps = 46/178 (25%)

Query: 6   HDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG---- 61
           H   + H D+K +NVLL                    ++            + DFG    
Sbjct: 148 HKPAISHRDIKSKNVLL-------------------KNNLT--------ACIADFGLALK 180

Query: 62  -STTYERPDQNYIVSTRHYRAPEVI-----LGLGWTYPCDIWSVGCILVELCTGEALFQT 115
                   D +  V TR Y APEV+              D++++G +L EL +       
Sbjct: 181 FEAGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAA-D 239

Query: 116 HENLEHLAMMERVLGPLP--QHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKL 171
               E++   E  +G  P  + M + V        ++ R    +       +  + + 
Sbjct: 240 GPVDEYMLPFEEEIGQHPSLEDMQEVVVH------KKKRPVLRDYWQKHAGMAMLCET 291

>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A* Length = 303

 Score = 47.3 bits (113), Expect = 1e-06
 Identities = 29/116 (25%), Positives = 43/116 (37%), Gaps = 36/116 (31%)

Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG--- 61
           +H    IH D+K  N+LL                               ++++ DFG   
Sbjct: 137 LHKNGQIHRDVKAGNILLGED---------------------------GSVQIADFGVSA 169

Query: 62  --STTYERPDQ---NYIVSTRHYRAPEVIL-GLGWTYPCDIWSVGCILVELCTGEA 111
             +T  +          V T  + APEV+    G+ +  DIWS G   +EL TG A
Sbjct: 170 FLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAA 225

>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} PDB: 3kmw_A* 3rep_A* Length = 271

 Score = 47.2 bits (113), Expect = 1e-06
 Identities = 17/122 (13%), Positives = 33/122 (27%), Gaps = 35/122 (28%)

Query: 10  MIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD 69
           +    L   +V++                   D             ++            
Sbjct: 134 IPRHALNSRSVMI-------------------DEDM--------TARISMADVKFSF--Q 164

Query: 70  QNYIVSTRHYRAPEVILGLGWTYP---CDIWSVGCILVELCTGEALFQTHENLEHLAMME 126
               +    + APE +            D+WS   +L EL T E  F    +L ++ +  
Sbjct: 165 SPGRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPF---ADLSNMEIGM 221

Query: 127 RV 128
           +V
Sbjct: 222 KV 223

>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens} Length = 319

 Score = 47.0 bits (112), Expect = 2e-06
 Identities = 26/139 (18%), Positives = 40/139 (28%), Gaps = 45/139 (32%)

Query: 6   HDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTY 65
           H   ++H DLK +NV           D                      + + DFG  + 
Sbjct: 147 HAKGILHKDLKSKNVFY---------DNGK-------------------VVITDFGLFSI 178

Query: 66  ERPDQNYIVS--------TRHYRAPEVILGLGWTYP---------CDIWSVGCILVELCT 108
               Q                + APE+I  L               D++++G I  EL  
Sbjct: 179 SGVLQAGRREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHA 238

Query: 109 GEALFQTHENLEHLAMMER 127
            E  F+T      +  M  
Sbjct: 239 REWPFKTQPAEAIIWQMGT 257

>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens} Length = 326

 Score = 47.0 bits (112), Expect = 2e-06
 Identities = 26/114 (22%), Positives = 46/114 (40%), Gaps = 35/114 (30%)

Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG--- 61
           +H   +IH D+K +NVLL                            +++ +K++DFG   
Sbjct: 145 LHQHKVIHRDIKGQNVLLT---------------------------ENAEVKLVDFGVSA 177

Query: 62  STTYERPDQNYIVSTRHYRAPEVIL-----GLGWTYPCDIWSVGCILVELCTGE 110
                   +N  + T ++ APEVI         + +  D+WS+G   +E+  G 
Sbjct: 178 QLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGA 231

>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A* Length = 348

 Score = 46.6 bits (111), Expect = 3e-06
 Identities = 49/248 (19%), Positives = 71/248 (28%), Gaps = 111/248 (44%)

Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG-ST 63
           +H   MIH D+K  N+LL                                +K+ DFG ++
Sbjct: 170 LHSHNMIHRDVKAGNILLSEP---------------------------GLVKLGDFGSAS 202

Query: 64  TYERPDQNYIVSTRHYRAPEVILGL---GWTYPCDIWSVGCILVELCTGEA-LFQTHENL 119
                  N  V T ++ APEVIL +    +    D+WS+G   +EL   +  LF  +   
Sbjct: 203 IMAP--ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMN--- 257

Query: 120 EHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVPFF 179
              AM    L  + Q+                                  + P LQ   +
Sbjct: 258 ---AM--SALYHIAQN----------------------------------ESPALQSGHW 278

Query: 180 YGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREA 239
              F  F   CL                                      P DR T+   
Sbjct: 279 SEYFRNFVDSCLQ------------------KI-----------------PQDRPTSEVL 303

Query: 240 LRHPFFTR 247
           L+H F  R
Sbjct: 304 LKHRFVLR 311

>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A* Length = 302

 Score = 46.2 bits (110), Expect = 3e-06
 Identities = 27/114 (23%), Positives = 44/114 (38%), Gaps = 35/114 (30%)

Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGST- 63
           +H   +IH DLK  NVL+                                I++ DFG + 
Sbjct: 133 LHSKRIIHRDLKAGNVLMTL---------------------------EGDIRLADFGVSA 165

Query: 64  --TYERPDQNYIVSTRHYRAPEVIL-----GLGWTYPCDIWSVGCILVELCTGE 110
                   ++  + T ++ APEV++        + Y  DIWS+G  L+E+   E
Sbjct: 166 KNLKTLQKRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIE 219

>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens} Length = 336

 Score = 44.8 bits (106), Expect = 1e-05
 Identities = 32/172 (18%), Positives = 55/172 (31%), Gaps = 32/172 (18%)

Query: 9   CMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERP 68
            + H DL   NVL+ +     + D+  S+    +         ++A              
Sbjct: 140 AISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNRLVRPGEEDNAA-------------- 185

Query: 69  DQNYIVSTRHYRAPEVILGL-------GWTYPCDIWSVGCILVELCTGEALFQTHENLEH 121
                V T  Y APEV+ G              D++++G I  E+          E++  
Sbjct: 186 --ISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFPGESVPE 243

Query: 122 LAM-MERVLGPLP--QHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMK 170
             M  +  +G  P  + M   V R       + R  +PE           +K
Sbjct: 244 YQMAFQTEVGNHPTFEDMQVLVSR------EKQRPKFPEAWKENSLAVRSLK 289

>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A* Length = 307

 Score = 39.8 bits (94), Expect = 4e-04
 Identities = 29/109 (26%), Positives = 43/109 (39%), Gaps = 33/109 (30%)

Query: 6   HDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTY 65
           H+   IH D+K  N+LL                   D ++     K S     DFG    
Sbjct: 150 HENHHIHRDIKSANILL-------------------DEAF---TAKIS-----DFGLARA 182

Query: 66  ERPDQNYIVSTR-----HYRAPEVILGLGWTYPCDIWSVGCILVELCTG 109
                  ++++R      Y APE + G   T   DI+S G +L+E+ TG
Sbjct: 183 SEKFAQTVMTSRIVGTTAYMAPEALRGE-ITPKSDIYSFGVVLLEIITG 230

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	252
4fih_A	346	Serine/threonine-protein kinase PAK 4; kinase doma	100.0
4b99_A	398	Mitogen-activated protein kinase 7; transferase, i	100.0
3hyh_A	275	Carbon catabolite-derepressing protein kinase; kin	100.0
4f9c_A	361	Cell division cycle 7-related protein kinase; Ser/	100.0
4fie_A	423	Serine/threonine-protein kinase PAK 4; kinase doma	100.0
4aw0_A	311	HPDK1, 3-phosphoinositide-dependent protein kinase	100.0
3ubd_A	304	Ribosomal protein S6 kinase alpha-3; kinase-inhibi	100.0
3fpq_A	290	Serine/threonine-protein kinase WNK1; protein seri	100.0
4b9d_A	350	Serine/threonine-protein kinase NEK1; transferase,	100.0
4g3f_A	336	NF-kappa-beta-inducing kinase; non-RD kinase, prot	100.0
4g31_A	299	Eukaryotic translation initiation factor 2-alpha;	100.0
3kvw_A	429	DYRK2, dual specificity tyrosine-phosphorylation-r	100.0
3ttj_A	464	Mitogen-activated protein kinase 10; JNK3, protein	100.0
3uto_A	573	Twitchin; kinase, muscle sarcomere, transferase; H	100.0
1cm8_A	367	Phosphorylated MAP kinase P38-gamma; phosphorylati	100.0
3v5w_A	689	G-protein coupled receptor kinase 2; inhibitor com	100.0
3oz6_A	388	Mitogen-activated protein kinase 1, serine/threon	100.0
3omv_A	307	RAF proto-oncogene serine/threonine-protein kinas;	100.0
3llt_A	360	Serine/threonine kinase-1, pflammer; lammer kinase	100.0
2fst_X	367	Mitogen-activated protein kinase 14; active mutant	100.0
3rp9_A	458	Mitogen-activated protein kinase; structural genom	100.0
3g33_A	308	Cell division protein kinase 4; Ser/Thr protein ki	100.0
2vx3_A	382	Dual specificity tyrosine-phosphorylation- regula	100.0
1wak_A	397	Serine/threonine-protein kinase SPRK1; SRPK, trans	100.0
3niz_A	311	Rhodanese family protein; structural genomics, str	100.0
4exu_A	371	Mitogen-activated protein kinase 13; P38 kinase, t	100.0
4ase_A	353	Vascular endothelial growth factor receptor 2; tra	100.0
3n9x_A	432	Phosphotransferase; malaria kinase, structural gen	100.0
1z57_A	339	Dual specificity protein kinase CLK1; protein tyro	100.0
3rgf_A	405	Cyclin-dependent kinase 8; protein kinase complex,	100.0
4e7w_A	394	Glycogen synthase kinase 3; GSK3, PTyr195, transfe	100.0
4aoj_A	329	High affinity nerve growth factor receptor; transf	100.0
4gt4_A	308	Tyrosine-protein kinase transmembrane receptor RO;	100.0
2pmi_A	317	Negative RE, cyclin-dependent protein kinase PHO85	100.0
4asz_A	299	BDNF/NT-3 growth factors receptor; transferase, TR	100.0
1q8y_A	373	SR protein kinase; transferase; HET: ADP ADE; 2.05	100.0
3e3p_A	360	Protein kinase, putative glycogen synthase kinase;	100.0
1j1b_A	420	Glycogen synthase kinase-3 beta; complex, TAU, AMP	100.0
3mtl_A	324	Cell division protein kinase 16; pctaire1, indirub	100.0
3coi_A	353	Mitogen-activated protein kinase 13; P38D, P38delt	100.0
2yab_A	361	Death-associated protein kinase 2; apoptosis, tran	100.0
3o0g_A	292	Cell division protein kinase 5; kinase activator c	100.0
1ob3_A	288	PFPK5, cell division control protein 2 homolog; tr	100.0
2eu9_A	355	Dual specificity protein kinase CLK3; kinase domai	100.0
3fe3_A	328	MAP/microtubule affinity-regulating kinase 3; seri	100.0
2xrw_A	371	Mitogen-activated protein kinase 8; transcription,	100.0
3qyz_A	364	Mitogen-activated protein kinase 1; transferase, s	100.0
3gbz_A	329	Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-	100.0
3eb0_A	383	Putative uncharacterized protein; kinase cryptospo	100.0
3mi9_A	351	Cell division protein kinase 9; P-TEFB, HIV-1, pro	100.0
1fot_A	318	TPK1 delta, CAMP-dependent protein kinase type 1;	100.0
2y0a_A	326	Death-associated protein kinase 1; transferase, ca	100.0
3txo_A	353	PKC-L, NPKC-ETA, protein kinase C ETA type; phosph	100.0
3fxz_A	297	Serine/threonine-protein kinase PAK 1; transferase	99.98
4agu_A	311	Cyclin-dependent kinase-like 1; transferase, phosp	99.98
3soa_A	444	Calcium/calmodulin-dependent protein kinase type a	99.98
1o6l_A	337	RAC-beta serine/threonine protein kinase; protein	99.98
1ua2_A	346	CAK, cell division protein kinase 7; cell cycle, p	99.98
3pg1_A	362	Mitogen-activated protein kinase, putative (MAP K	99.98
1rdq_E	350	PKA C-alpha, CAMP-dependent protein kinase, alpha-	99.98
3zgw_A	347	Maternal embryonic leucine zipper kinase; transfer	99.98
2i0e_A	353	Protein kinase C-beta II; serine/threonine protein	99.98
1tki_A	321	Titin; serine kinase, muscle, autoinhibition; 2.00	99.98
1xjd_A	345	Protein kinase C, theta type; PKC-theta, ATP, AMP,	99.97
4dc2_A	396	Protein kinase C IOTA type; kinase, substrate, cel	99.97
2bdw_A	362	Hypothetical protein K11E8.1D; kinase, calmodulin	99.97
4aaa_A	331	Cyclin-dependent kinase-like 2; transferase, phosp	99.97
1kob_A	387	Twitchin; kinase, intrasteric regulation; 2.30A {A	99.97
2r3i_A	299	Cell division protein kinase 2; serine/threonine-p	99.97
4ejn_A	446	RAC-alpha serine/threonine-protein kinase; AKT1, a	99.97
3a62_A	327	Ribosomal protein S6 kinase beta-1; kinase domain,	99.97
1blx_A	326	Cyclin-dependent kinase 6; inhibitor protein, cycl	99.97
3a8x_A	345	Protein kinase C IOTA type; transferase; HET: TPO;	99.97
2x4f_A	373	Myosin light chain kinase family member 4; LUNG, b	99.97
3pfq_A	674	PKC-B, PKC-beta, protein kinase C beta type; phosp	99.97
2a2a_A	321	Death-associated protein kinase 2; autoinhibition,	99.97
2zv2_A	298	Calcium/calmodulin-dependent protein kinase kinas;	99.97
3v8s_A	410	RHO-associated protein kinase 1; dimerization, myo	99.97
2c30_A	321	Serine/threonine-protein kinase PAK 6; CRIB domain	99.97
3c0i_A	351	Peripheral plasma membrane protein CASK; neurexin,	99.97
2r5t_A	373	Serine/threonine-protein kinase SGK1; AGC protein	99.97
2eue_A	275	Carbon catabolite derepressing protein kinase; kin	99.97
3lm5_A	327	Serine/threonine-protein kinase 17B; STK17B, serin	99.97
2b9h_A	353	MAP kinase FUS3, mitogen-activated protein kinase	99.97
3q60_A	371	ROP5B; pseudokinase, transferase; HET: ATP; 1.72A	99.97
3tki_A	323	Serine/threonine-protein kinase CHK1; cell checkpo	99.97
3fdn_A	279	Serine/threonine-protein kinase 6; aurora kinase i	99.97
3h4j_B	336	AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin	99.97
3nsz_A	330	CK II alpha, casein kinase II subunit alpha; inhib	99.97
3p1a_A	311	MYT1 kinase, membrane-associated tyrosine- and thr	99.97
3gni_B	389	Strad alpha; kinase fold, pseudokinase, alpha heli	99.97
2w4o_A	349	Calcium/calmodulin-dependent protein kinase type I	99.97
4aw2_A	437	Serine/threonine-protein kinase MRCK alpha; transf	99.97
2y7j_A	365	Phosphorylase B kinase gamma catalytic chain, test	99.97
2qr7_A	342	Ribosomal protein S6 kinase alpha-3; kinase domain	99.97
3kk8_A	284	Calcium/calmodulin dependent protein kinase II; AT	99.97
3byv_A	377	Rhoptry kinase; malaria, transferase, structural g	99.97
1nxk_A	400	MAP kinase-activated protein kinase 2; MK2, phosph	99.97
3is5_A	285	Calcium-dependent protein kinase; CDPK, structural	99.97
3uc3_A	361	Serine/threonine-protein kinase SRK2I; SNRK2, ABA	99.97
2y94_A	476	5'-AMP-activated protein kinase catalytic subunit;	99.97
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	99.97
4fr4_A	384	YANK1, serine/threonine-protein kinase 32A; struct	99.97
3kn6_A	325	Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1	99.97
2i6l_A	320	Mitogen-activated protein kinase 6; MAPK6, ERK3, e	99.97
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	99.97
3hko_A	345	Calcium/calmodulin-dependent protein kinase with d	99.97
3f3z_A	277	Calcium/calmodulin-dependent protein kinase with d	99.97
2vgo_A	284	Serine/threonine-protein kinase 12-A; nucleotide-b	99.97
2vd5_A	412	DMPK protein; serine/threonine-protein kinase, kin	99.97
3i6u_A	419	CDS1, serine/threonine-protein kinase CHK2; Ser/Th	99.97
2ac3_A	316	MAP kinase-interacting serine/threonine kinase 2;	99.97
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	99.97
2zmd_A	390	Dual specificity protein kinase TTK; MPS1, T686A,	99.97
3dbq_A	343	Dual specificity protein kinase TTK; MPS1 structur	99.97
3hmm_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	99.97
1u5q_A	348	Serine/threonine protein kinase TAO2; transferase;	99.97
3dls_A	335	PAS domain-containing serine/threonine-protein KI;	99.97
2acx_A	576	G protein-coupled receptor kinase 6; GRK, G transf	99.97
3qd2_B	332	Eukaryotic translation initiation factor 2-alpha;	99.97
1t4h_A	290	Serine/threonine-protein kinase WNK1; protein seri	99.97
3bhy_A	283	Death-associated protein kinase 3; death associate	99.97
3c4z_A	543	Rhodopsin kinase; Ser/Thr kinase, RGS homology dom	99.97
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	99.97
1x8b_A	289	WEE1HU, WEE1-like protein kinase; cell cycle, tran	99.96
3eqc_A	360	Dual specificity mitogen-activated protein kinase;	99.96
2jam_A	304	Calcium/calmodulin-dependent protein kinase type 1	99.96
3cok_A	278	Serine/threonine-protein kinase PLK4; POLO-like ki	99.96
3dzo_A	413	Rhoptry kinase domain; parasitic disease, transfer	99.96
3p23_A	432	Serine/threonine-protein kinase/endoribonuclease;	99.96
3fme_A	290	Dual specificity mitogen-activated protein kinase;	99.96
2yex_A	276	Serine/threonine-protein kinase CHK1; transferase,	99.96
2owb_A	335	Serine/threonine-protein kinase PLK1; catalytic do	99.96
2h6d_A	276	5'-AMP-activated protein kinase catalytic subunit	99.96
2rku_A	294	Serine/threonine-protein kinase PLK1; structure of	99.96
2wtk_C	305	Serine/threonine-protein kinase 11; transferase-me	99.96
1phk_A	298	Phosphorylase kinase; glycogen metabolism, transfe	99.96
1vzo_A	355	Ribosomal protein S6 kinase alpha 5; protein kinas	99.96
2x7f_A	326	TRAF2 and NCK-interacting protein kinase; serine/t	99.96
2clq_A	295	Mitogen-activated protein kinase kinase kinase 5;	99.96
3fhr_A	336	MAP kinase-activated protein kinase 3; kinase-inhi	99.96
2ycf_A	322	Serine/threonine-protein kinase CHK2; transferase,	99.96
3com_A	314	Serine/threonine-protein kinase 4; MST1, STE20-lik	99.96
2vwi_A	303	Serine/threonine-protein kinase OSR1; STE kinase,	99.96
2rio_A	434	Serine/threonine-protein kinase/endoribonuclease I	99.96
3a7i_A	303	MST3 kinase, serine/threonine kinase 24 (STE20 hom	99.96
3an0_A	340	Dual specificity mitogen-activated protein kinase;	99.96
2j7t_A	302	Serine/threonine-protein kinase 10; transferase, A	99.96
3a99_A	320	Proto-oncogene serine/threonine-protein kinase PI;	99.96
3ork_A	311	Serine/threonine protein kinase; structural genomi	99.96
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	99.96
2pml_X	348	PFPK7, Ser/Thr protein kinase; phosphorylati trans	99.96
2wei_A	287	Calmodulin-domain protein kinase 1, putative; nucl	99.95
3qup_A	323	Tyrosine-protein kinase receptor TYRO3; protein ki	99.95
1zy4_A	303	Serine/threonine-protein kinase GCN2; translation	99.95
3cek_A	313	Dual specificity protein kinase TTK; HMPS1, PYT, E	99.95
2w5a_A	279	Serine/threonine-protein kinase NEK2; Ser/Thr prot	99.95
4euu_A	319	Serine/threonine-protein kinase TBK1; ATP binding,	99.95
2dyl_A	318	Dual specificity mitogen-activated protein kinase	99.95
2iwi_A	312	Serine/threonine-protein kinase PIM-2; nucleotide-	99.95
3kex_A	325	Receptor tyrosine-protein kinase ERBB-3; kinase do	99.95
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	99.95
1csn_A	298	Casein kinase-1; phosphotransferase; HET: ATP; 2.0	99.95
2psq_A	370	Fibroblast growth factor receptor 2; kinase domain	99.95
3vhe_A	359	Vascular endothelial growth factor receptor 2; kin	99.95
2v62_A	345	Serine/threonine-protein kinase VRK2; transferase,	99.95
3poz_A	327	Epidermal growth factor receptor; kinase domain, a	99.95
3l9p_A	367	Anaplastic lymphoma kinase; kinase domain, ATP-bin	99.95
3aln_A	327	Dual specificity mitogen-activated protein kinase;	99.95
4hgt_A	296	Casein kinase I isoform delta; CK1D, inhibitor, tr	99.95
3tt0_A	382	Basic fibroblast growth factor receptor 1; kinase	99.95
3lzb_A	327	Epidermal growth factor receptor; epidermal growth	99.95
2izr_A	330	Casein kinase I isoform gamma-3; serine/threonine-	99.95
3uzp_A	296	CKI-delta, CKID, casein kinase I isoform delta; CK	99.95
4f0f_A	287	Serine/threonine-protein kinase ROCO4; LRRK2, ATP-	99.95
4hcu_A	269	Tyrosine-protein kinase ITK/TSK; transferase-trans	99.95
1mp8_A	281	Focal adhesion kinase 1; tyrosine protein kinase,	99.94
3kul_A	325	Ephrin type-A receptor 8; ATP-binding, kinase, nuc	99.94
1k9a_A	450	Carboxyl-terminal SRC kinase; COOH-terminal SRC ki	99.94
3op5_A	364	Serine/threonine-protein kinase VRK1; adenosine tr	99.94
3sxs_A	268	Cytoplasmic tyrosine-protein kinase BMX; transfera	99.94
4fvq_A	289	Tyrosine-protein kinase JAK2; janus protein kinase	99.94
3gen_A	283	Tyrosine-protein kinase BTK; bruton'S tyrosine kin	99.94
3dtc_A	271	Mitogen-activated protein kinase kinase kinase 9;	99.94
2eva_A	307	TAK1 kinase - TAB1 chimera fusion protein; transfe	99.94
1rjb_A	344	FL cytokine receptor; kinase, structure, autoinhib	99.94
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	99.94
3cc6_A	281	Protein tyrosine kinase 2 beta; focal adhesion kin	99.94
1qcf_A	454	Haematopoetic cell kinase (HCK); tyrosine kinase-i	99.94
4eqm_A	294	Protein kinase; transferase; HET: ANP; 3.00A {Stap	99.94
1byg_A	278	CSK, protein (C-terminal SRC kinase); protein kina	99.94
3sv0_A	483	Casein kinase I-like; typical kinase domain fold,	99.94
2ivs_A	314	Proto-oncogene tyrosine-protein kinase receptor RE	99.94
1t46_A	313	HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom	99.94
2xir_A	316	Vascular endothelial growth factor receptor 2; ang	99.94
3soc_A	322	Activin receptor type-2A; structural genomics cons	99.94
3q4u_A	301	Activin receptor type-1; structural genomics conso	99.94
3brb_A	313	Proto-oncogene tyrosine-protein kinase MER; ATP-bi	99.94
1p4o_A	322	Insulin-like growth factor I receptor protein; IGF	99.94
3s95_A	310	LIMK-1, LIM domain kinase 1; structural genomics,	99.94
2jii_A	352	Serine/threonine-protein kinase VRK3 molecule: VA	99.94
1luf_A	343	Muscle-specific tyrosine kinase receptor MUSK; pho	99.94
2qkw_B	321	Protein kinase; three-helix bundle motif, AVRPTO-P	99.94
3pls_A	298	Macrophage-stimulating protein receptor; protein k	99.94
1fvr_A	327	Tyrosine-protein kinase TIE-2; tyrosine kinase, tr	99.94
3qa8_A	676	MGC80376 protein; kinase ubiquitin-like domain, ph	99.94
3c1x_A	373	Hepatocyte growth factor receptor; receptor tyrosi	99.94
2qol_A	373	Ephrin receptor; receptor tyrosine kinase, juxtame	99.94
3ll6_A	337	Cyclin G-associated kinase; transferase, protein k	99.94
1fmk_A	452	C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros	99.94
2yfx_A	327	Tyrosine-protein kinase receptor; nucleotide-bindi	99.94
1mqb_A	333	Ephrin type-A receptor 2; tyrosine protein kinase,	99.94
1u59_A	287	Tyrosine-protein kinase ZAP-70; transferase; HET:	99.94
2pvf_A	334	Fibroblast growth factor receptor 2; kinase domain	99.94
2i1m_A	333	Macrophage colony-stimulating factor 1 receptor; k	99.94
3kmu_A	271	ILK, integrin-linked kinase; cell adhesion, ANK re	99.94
3kfa_A	288	Tyrosine-protein kinase ABL1; CML, drug resistance	99.94
1u46_A	291	ACK-1, activated CDC42 kinase 1; tyrosine kinase,	99.94
3t9t_A	267	Tyrosine-protein kinase ITK/TSK; kinase domain, al	99.94
3f66_A	298	Hepatocyte growth factor receptor; C-Met, protein	99.94
1qpc_A	279	LCK kinase; alpha beta fold, transferase; HET: PTR	99.94
3cbl_A	377	C-FES, proto-oncogene tyrosine-protein kinase FES/	99.94
3g2f_A	336	Bone morphogenetic protein receptor type-2; kinase	99.93
1xbb_A	291	Tyrosine-protein kinase SYK; gleevec, STI-571, ima	99.93
3ugc_A	295	Tyrosine-protein kinase JAK2; small molecule inhib	99.93
3uim_A	326	Brassinosteroid insensitive 1-associated receptor;	99.93
4fl3_A	635	Tyrosine-protein kinase SYK; transferase; HET: ANP	99.93
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	99.93
2ozo_A	613	Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t	99.93
3lxl_A	327	Tyrosine-protein kinase JAK3; TYK2, inflammation,	99.93
3mdy_A	337	Bone morphogenetic protein receptor type-1B; compl	99.93
2nru_A	307	Interleukin-1 receptor-associated kinase 4; inhibi	99.93
2a19_B	284	Interferon-induced, double-stranded RNA-activated	99.93
2h8h_A	535	Proto-oncogene tyrosine-protein kinase SRC; SRC ki	99.93
4eut_A	396	Serine/threonine-protein kinase TBK1; ATP binding,	99.93
4e5w_A	302	Tyrosine-protein kinase JAK1; kinase domain, trans	99.93
2y4i_B	319	KSR2, HKSR2, kinase suppressor of RAS 2; transfera	99.93
3m2w_A	299	MAP kinase-activated protein kinase 2; small molec	99.93
2h34_A	309	Serine/threonine-protein kinase PKNE; apoenzyme, t	99.93
2j0j_A	656	Focal adhesion kinase 1; cell migration, FERM, tra	99.93
2wqm_A	310	Serine/threonine-protein kinase NEK7; ATP-binding,	99.93
3lxp_A	318	Non-receptor tyrosine-protein kinase TYK2; JAK3, i	99.92
1b6c_B	342	TGF-B superfamily receptor type I; complex (isomer	99.91
2w1i_A	326	JAK2; chromosomal rearrangement, nucleotide-bindin	99.91
2vuw_A	336	Serine/threonine-protein kinase haspin; cell cycle	99.91
3gxj_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	99.91
3e7e_A	365	HBUB1, BUB1A, mitotic checkpoint serine/threonine-	99.91
2buj_A	317	Serine/threonine-protein kinase 16; transferase, A	99.91
2pzi_A	681	Probable serine/threonine-protein kinase PKNG; ATP	99.89
3uqc_A	286	Probable conserved transmembrane protein; structur	99.83
4azs_A	569	Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15	99.73
3en9_A	540	Glycoprotease, O-sialoglycoprotein endopeptidase/p	99.42
1zar_A	282	RIO2 kinase; serine kinase, winged-helix, RIO doma	99.03
1zth_A	258	RIO1 serine protein kinase; ribosome biogenesis, r	98.64
4gyi_A	397	RIO2 kinase; protein kinase, ADP complex, phosphoa	98.03
3sg8_A	304	APH(2'')-ID; antibiotic resistance enzyme, transfe	95.88
3tm0_A	263	Aminoglycoside 3'-phosphotransferase; protein kina	95.47
1nd4_A	264	Aminoglycoside 3'-phosphotransferase; protein kina	94.79
2q83_A	346	YTAA protein; 2635576, structural genomics, joint	93.25
3dxp_A	359	Putative acyl-COA dehydrogenase; protein kinase-li	92.41
2pyw_A	420	Uncharacterized protein; 5-methylthioribose kinase	91.3
3csv_A	333	Aminoglycoside phosphotransferase; YP_614837.1, ph	88.84
4gkh_A	272	Aminoglycoside 3'-phosphotransferase APHA1-IAB; py	88.77
3tdw_A	306	Gentamicin resistance protein; kinase, phosphoryl	87.6
3ovc_A	362	Hygromycin-B 4-O-kinase; aminoglycoside phosphotra	87.47
2ppq_A	322	HSK, HK, homoserine kinase; structural genomics, M	86.85
3r70_A	320	Aminoglycoside phosphotransferase; structural geno	86.57
1zyl_A	328	Hypothetical protein YIHE; putative protein kinase	85.59
3ats_A	357	Putative uncharacterized protein; hypothetical pro	84.57
2olc_A	397	MTR kinase, methylthioribose kinase; kinase ADP-2H	84.36
3c5i_A	369	Choline kinase; choline, kinase, malaria, transfer	81.69

>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*

Probab=100.00  E-value=7.6e-41  Score=276.63  Aligned_cols=146  Identities=32%  Similarity=0.568  Sum_probs=117.0

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCC---CCccccCC
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD---QNYIVSTR   77 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~---~~~~~~t~   77 (252)
                      ||+|||++|||||||||+|||++.                           ++.+||+|||+|+.....   ....+||+
T Consensus       182 aL~ylH~~~IiHRDlKp~NILl~~---------------------------~g~vKl~DFGla~~~~~~~~~~~~~~GTp  234 (346)
T 4fih_A          182 ALSVLHAQGVIHRDIKSDSILLTH---------------------------DGRVKLSDFGFCAQVSKEVPRRKSLVGTP  234 (346)
T ss_dssp             HHHHHHHTTEECCCCSGGGEEECT---------------------------TCCEEECCCTTCEECCSSSCCBCCCCSCG
T ss_pred             HHHHHHHCCcccccCCHHHEEECC---------------------------CCCEEEecCcCceecCCCCCcccccccCc
Confidence            689999999999999999999944                           456788888887654332   23458999


Q ss_pred             CcccchhhhcCCCCccchhHhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHHHHHHhhcCCCCCCc
Q 025467           78 HYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPE  157 (252)
Q Consensus        78 ~y~aPE~l~~~~~~~~~Diws~G~~l~~l~~g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~  157 (252)
                      .|+|||++.+..|+.++||||+||++|+|++|..||.+.+..+.+..+.....+.                    +    
T Consensus       235 ~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~~~i~~~~~~~--------------------~----  290 (346)
T 4fih_A          235 YWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPR--------------------L----  290 (346)
T ss_dssp             GGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSSCCC--------------------C----
T ss_pred             CcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHcCCCCC--------------------C----
Confidence            9999999999899999999999999999999999998877666554443211100                    0    


Q ss_pred             cccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCCCCCHH
Q 025467          158 GAASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAR  237 (252)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~ta~  237 (252)
                                                                         ..+...++++++||.+||+.||++||||+
T Consensus       291 ---------------------------------------------------~~~~~~s~~~~dli~~~L~~dP~~R~ta~  319 (346)
T 4fih_A          291 ---------------------------------------------------KNLHKVSPSLKGFLDRLLVRDPAQRATAA  319 (346)
T ss_dssp             ---------------------------------------------------SCGGGSCHHHHHHHHHHSCSSTTTSCCHH
T ss_pred             ---------------------------------------------------CccccCCHHHHHHHHHHcCCChhHCcCHH
Confidence                                                               01133567899999999999999999999


Q ss_pred             HHHcCCCCCCc
Q 025467          238 EALRHPFFTRD  248 (252)
Q Consensus       238 e~l~hpwf~~~  248 (252)
                      |+|+||||+..
T Consensus       320 e~l~Hp~~~~~  330 (346)
T 4fih_A          320 ELLKHPFLAKA  330 (346)
T ss_dssp             HHTTCGGGGGC
T ss_pred             HHhcCHhhcCC
Confidence            99999999864

>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}

Probab=100.00  E-value=2.9e-40  Score=279.40  Aligned_cols=173  Identities=33%  Similarity=0.536  Sum_probs=127.3

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCC-------CCCcc
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERP-------DQNYI   73 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~-------~~~~~   73 (252)
                      ||+|||++|||||||||+|||++.                           .+.+||+|||+|+....       .....
T Consensus       170 al~ylH~~~iiHRDlKP~NIl~~~---------------------------~~~~Ki~DFGla~~~~~~~~~~~~~~~~~  222 (398)
T 4b99_A          170 GLKYMHSAQVIHRDLKPSNLLVNE---------------------------NCELKIGDFGMARGLCTSPAEHQYFMTEY  222 (398)
T ss_dssp             HHHHHHHTTCBCCCCCGGGEEECT---------------------------TCCEEECCCTTCBCC-------CCCCCSS
T ss_pred             HHHHHHHCcCcCCCcCccccccCC---------------------------CCCEEEeecceeeecccCccccccccccc
Confidence            689999999999999999999954                           44567777776654321       12335


Q ss_pred             ccCCCcccchhhhcCC-CCccchhHhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHHHH-HHhhcC
Q 025467           74 VSTRHYRAPEVILGLG-WTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAE-KYVRRG  151 (252)
Q Consensus        74 ~~t~~y~aPE~l~~~~-~~~~~Diws~G~~l~~l~~g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~-~~~~~~  151 (252)
                      +||+.|+|||++.+.. |+.++||||+||++|+|++|.+||.+.+..+++..|....|.++...+........ .+... 
T Consensus       223 ~GT~~Y~APEv~~~~~~~~~~~DiWSlG~il~ell~G~~pF~g~~~~~~l~~I~~~~g~p~~~~~~~~~~~~~~~~~~~-  301 (398)
T 4b99_A          223 VATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLIMMVLGTPSPAVIQAVGAERVRAYIQS-  301 (398)
T ss_dssp             CCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTSCSSCCSSHHHHHHHHHHHHCCCCGGGTC-----CHHHHHHS-
T ss_pred             eeChHhcCHHHhcCCCCCCChhheehhHHHHHHHHHCCCCCCCCCHHHHHHHHHHhcCCCChHHhhhhhhhhhhhhhhc-
Confidence            8999999999998764 68999999999999999999999999999999999999999887654322211110 11110 


Q ss_pred             CCCCCccccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCC
Q 025467          152 RLDWPEGAASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPT  231 (252)
Q Consensus       152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~  231 (252)
                                         .+...                            +..........+++++|||.+||++||.
T Consensus       302 -------------------~~~~~----------------------------~~~~~~~~~~~s~~~~dLl~~mL~~dP~  334 (398)
T 4b99_A          302 -------------------LPPRQ----------------------------PVPWETVYPGADRQALSLLGRMLRFEPS  334 (398)
T ss_dssp             -------------------SCCCC----------------------------CCCHHHHSTTCCHHHHHHHHHHSCSSTT
T ss_pred             -------------------CCCcC----------------------------CCCHHHhCCCCCHHHHHHHHHHCcCChh
Confidence                               00000                            0000111234567999999999999999


Q ss_pred             CCCCHHHHHcCCCCCCc
Q 025467          232 DRLTAREALRHPFFTRD  248 (252)
Q Consensus       232 ~R~ta~e~l~hpwf~~~  248 (252)
                      +||||+|+|+||||++.
T Consensus       335 ~R~ta~e~L~Hp~f~~~  351 (398)
T 4b99_A          335 ARISAAAALRHPFLAKY  351 (398)
T ss_dssp             TSCCHHHHTTSGGGTTT
T ss_pred             HCcCHHHHhcCHhhCcC
Confidence            99999999999999864

>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A

Probab=100.00  E-value=2.2e-40  Score=266.43  Aligned_cols=143  Identities=26%  Similarity=0.421  Sum_probs=106.2

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCC--CCccccCCC
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD--QNYIVSTRH   78 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~--~~~~~~t~~   78 (252)
                      ||+|||++||+||||||+|||++.                           ++.+||+|||+|+.....  ....+||+.
T Consensus       124 al~ylH~~~IiHRDiKP~NILl~~---------------------------~~~vkl~DFGla~~~~~~~~~~~~~GT~~  176 (275)
T 3hyh_A          124 AVEYCHRHKIVHRDLKPENLLLDE---------------------------HLNVKIADFGLSNIMTDGNFLKTSCGSPN  176 (275)
T ss_dssp             HHHHHHHTTCCCCCCCTTTEEECT---------------------------TCCEEECCSSCC---------------CT
T ss_pred             HHHHHHHCCcccccCChHHeEECC---------------------------CCCEEEeecCCCeecCCCCccCCeeECcc
Confidence            689999999999999999999944                           456777888877654332  233589999


Q ss_pred             cccchhhhcCCC-CccchhHhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHHHHHHhhcCCCCCCc
Q 025467           79 YRAPEVILGLGW-TYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPE  157 (252)
Q Consensus        79 y~aPE~l~~~~~-~~~~Diws~G~~l~~l~~g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~  157 (252)
                      |+|||++.+..| +.++||||+||++|+|++|+.||.+.+....+..+..                       +....| 
T Consensus       177 Y~APE~~~~~~y~~~~~DiwSlGvily~lltg~~PF~~~~~~~~~~~i~~-----------------------~~~~~p-  232 (275)
T 3hyh_A          177 YAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISN-----------------------GVYTLP-  232 (275)
T ss_dssp             TSCHHHHSSSSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHH-----------------------TCCCCC-
T ss_pred             cCChhhhcCCCCCCChhhhHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHc-----------------------CCCCCC-
Confidence            999999998876 5799999999999999999999987665444333322                       111111 


Q ss_pred             cccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCCCCCHH
Q 025467          158 GAASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAR  237 (252)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~ta~  237 (252)
                                                                            ...++++.+||.+||+.||++|||++
T Consensus       233 ------------------------------------------------------~~~s~~~~~li~~~L~~dP~~R~s~~  258 (275)
T 3hyh_A          233 ------------------------------------------------------KFLSPGAAGLIKRMLIVNPLNRISIH  258 (275)
T ss_dssp             ------------------------------------------------------TTSCHHHHHHHHHHSCSSGGGSCCHH
T ss_pred             ------------------------------------------------------CCCCHHHHHHHHHHccCChhHCcCHH
Confidence                                                                  12456899999999999999999999


Q ss_pred             HHHcCCCCCCc
Q 025467          238 EALRHPFFTRD  248 (252)
Q Consensus       238 e~l~hpwf~~~  248 (252)
                      |+|+||||+.+
T Consensus       259 eil~hpw~k~~  269 (275)
T 3hyh_A          259 EIMQDDWFKVD  269 (275)
T ss_dssp             HHHHCHHHHTT
T ss_pred             HHHcCcccccC
Confidence            99999999764

>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*

Probab=100.00  E-value=5e-40  Score=275.04  Aligned_cols=225  Identities=21%  Similarity=0.290  Sum_probs=127.0

Q ss_pred             ChhhhhccCccccCCCCCCeEeecC-CccccCCCccCCCCCCCCccccCCC-CCC-ceEEeecCC--ccccCCCCCcccc
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSS-EYIKVPDYKSSLHTPKDSSYFKRMP-KSS-AIKVIDFGS--TTYERPDQNYIVS   75 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~-~~~~~~d~~~~~~~~~~~~~~~~~~-~~~-~~~l~dfg~--~~~~~~~~~~~~~   75 (252)
                      ||+|||++||+||||||+|||++.+ +.++++|||+|.............. ... .....+-..  ...........+|
T Consensus       129 al~ylH~~gIiHRDiKPeNiLl~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G  208 (361)
T 4f9c_A          129 ALKRIHQFGIVHRDVKPSNFLYNRRLKKYALVDFGLAQGTHDTKIELLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAG  208 (361)
T ss_dssp             HHHHHHHTTEECSCCSGGGEEEETTTTEEEECCCTTCEECTTCSCGGGGGC--------------------------CCC
T ss_pred             HHHHHHHCCeEeCcCCHHHeEEeCCCCeEEECcCCCCcccCCcccccccccccccccccccccccccccccccccccccc
Confidence            6899999999999999999999866 6777788877754322211100000 000 000000000  0000011123479


Q ss_pred             CCCcccchhhhcC-CCCccchhHhHHHHHHHHHhCCCCCC-CCChHHHHHHHHHHhCCCchHHHHHhhHHHHHHhhcCCC
Q 025467           76 TRHYRAPEVILGL-GWTYPCDIWSVGCILVELCTGEALFQ-THENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRL  153 (252)
Q Consensus        76 t~~y~aPE~l~~~-~~~~~~Diws~G~~l~~l~~g~~pf~-~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~  153 (252)
                      |+.|+|||++.+. .|+.++||||+||++|+|++|+.||. +.++.+++..|..++|+++........  ......  ..
T Consensus       209 T~~Y~APE~l~~~~~y~~~~DiWSlG~il~ell~G~~Pf~~~~~~~~~l~~I~~~~G~~~~~~~~~~~--~~~~~~--~~  284 (361)
T 4f9c_A          209 TPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLSGRYPFYKASDDLTALAQIMTIRGSRETIQAAKTF--GKSILC--SK  284 (361)
T ss_dssp             CGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHHHHHHCHHHHHHHHHHT--TEEEEE--SS
T ss_pred             CccccCHHHHcCCCCCCCccchhhhHHHHHHHHHCCCCCCCCCCHHHHHHHHHHhcCCccchhhhhhc--cccccc--cc
Confidence            9999999999876 48999999999999999999999984 556778899999999965432211110  000000  00


Q ss_pred             CCCccccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCCC
Q 025467          154 DWPEGAASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDR  233 (252)
Q Consensus       154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R  233 (252)
                      ..+... .....+...... ...+...                  ............+...+++++|||.+||++||++|
T Consensus       285 ~~p~~~-~~~~~~~~~~~~-~~~p~~~------------------~~~~~~~~~~~~~~~is~~a~DLl~~lL~~dP~~R  344 (361)
T 4f9c_A          285 EVPAQD-LRKLCERLRGMD-SSTPKLT------------------SDIQGHATNLEGWNEVPDEAYDLLDKLLDLNPASR  344 (361)
T ss_dssp             CCCCCC-HHHHHHHHC-----------------------------------------CTTCCHHHHHHHHHHTCSCTTTS
T ss_pred             cCcchh-hhHHHHhhcccc-ccccccc------------------cccccccccccccccCCHHHHHHHHHHCcCChhHC
Confidence            000000 000000000000 0000000                  00000111123456678899999999999999999


Q ss_pred             CCHHHHHcCCCCCCcc
Q 025467          234 LTAREALRHPFFTRDH  249 (252)
Q Consensus       234 ~ta~e~l~hpwf~~~~  249 (252)
                      +||+|+|+||||++.+
T Consensus       345 ~ta~eaL~Hp~f~~i~  360 (361)
T 4f9c_A          345 ITAEEALLHPFFKDMS  360 (361)
T ss_dssp             CCHHHHHTSGGGTTC-
T ss_pred             cCHHHHhcCcccCCCC
Confidence            9999999999999764

>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}

Probab=100.00  E-value=6.6e-40  Score=277.35  Aligned_cols=146  Identities=32%  Similarity=0.568  Sum_probs=116.9

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCC---CCccccCC
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD---QNYIVSTR   77 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~---~~~~~~t~   77 (252)
                      ||+|||++|||||||||+|||++.                           ++.+||+|||+|+.....   ....+||+
T Consensus       259 aL~ylH~~~IiHRDiKp~NILl~~---------------------------~g~vKl~DFGla~~~~~~~~~~~~~~GTp  311 (423)
T 4fie_A          259 ALSVLHAQGVIHRDIKSDSILLTH---------------------------DGRVKLSDFGFCAQVSKEVPRRKSLVGTP  311 (423)
T ss_dssp             HHHHHHHTTEECCCCSTTTEEECT---------------------------TCCEEECCCTTCEECCSSCCCBCCCEECT
T ss_pred             HHHHHHHCCeecccCCHHHEEEcC---------------------------CCCEEEecCccceECCCCCccccccccCc
Confidence            689999999999999999999944                           446788888887654322   23458999


Q ss_pred             CcccchhhhcCCCCccchhHhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHHHHHHhhcCCCCCCc
Q 025467           78 HYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPE  157 (252)
Q Consensus        78 ~y~aPE~l~~~~~~~~~Diws~G~~l~~l~~g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~  157 (252)
                      .|||||++.+..|+.++||||+||++|+|++|..||.+.+..+.+..+.....+.                    +    
T Consensus       312 ~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~~~i~~~~~~~--------------------~----  367 (423)
T 4fie_A          312 YWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPR--------------------L----  367 (423)
T ss_dssp             TTCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSCCCC--------------------C----
T ss_pred             CcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHcCCCCC--------------------C----
Confidence            9999999999999999999999999999999999998877666554443211000                    0    


Q ss_pred             cccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCCCCCHH
Q 025467          158 GAASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAR  237 (252)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~ta~  237 (252)
                                                                         ..+...++++++||.+||+.||++||||+
T Consensus       368 ---------------------------------------------------~~~~~~s~~~~dli~~~L~~dP~~R~ta~  396 (423)
T 4fie_A          368 ---------------------------------------------------KNLHKVSPSLKGFLDRLLVRDPAQRATAA  396 (423)
T ss_dssp             ---------------------------------------------------SCTTSSCHHHHHHHHHHSCSSTTTSCCHH
T ss_pred             ---------------------------------------------------cccccCCHHHHHHHHHHcCCChhHCcCHH
Confidence                                                               01134567899999999999999999999


Q ss_pred             HHHcCCCCCCc
Q 025467          238 EALRHPFFTRD  248 (252)
Q Consensus       238 e~l~hpwf~~~  248 (252)
                      |+|+||||+..
T Consensus       397 ell~Hp~~~~~  407 (423)
T 4fie_A          397 ELLKHPFLAKA  407 (423)
T ss_dssp             HHTTCGGGGGC
T ss_pred             HHhcCHHhcCC
Confidence            99999999864

>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...

Probab=100.00  E-value=4.6e-40  Score=268.23  Aligned_cols=144  Identities=31%  Similarity=0.554  Sum_probs=116.0

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCC-----CCcccc
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD-----QNYIVS   75 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~-----~~~~~~   75 (252)
                      ||+|||++||+||||||+|||++                           .++.+||+|||+|+.....     ....+|
T Consensus       144 al~ylH~~~IiHRDlKPeNILl~---------------------------~~g~vKl~DFGla~~~~~~~~~~~~~~~~G  196 (311)
T 4aw0_A          144 ALEYLHGKGIIHRDLKPENILLN---------------------------EDMHIQITDFGTAKVLSPESKQARANSFVG  196 (311)
T ss_dssp             HHHHHHHTTEECSCCSGGGEEEC---------------------------TTSCEEECCCTTCEECCTTTTCCCBCCCCS
T ss_pred             HHHHHHHCCCccCCCCHHHeEEc---------------------------CCCCEEEEEcCCceecCCCCCcccccCccc
Confidence            68999999999999999999994                           4456788888888654321     123589


Q ss_pred             CCCcccchhhhcCCCCccchhHhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHHHHHHhhcCCCCC
Q 025467           76 TRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDW  155 (252)
Q Consensus        76 t~~y~aPE~l~~~~~~~~~Diws~G~~l~~l~~g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~  155 (252)
                      |+.|+|||++.+..|+.++||||+||++|+|++|..||.+.+....+.++...                       .+.+
T Consensus       197 Tp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~~~i~~~-----------------------~~~~  253 (311)
T 4aw0_A          197 TAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEGLIFAKIIKL-----------------------EYDF  253 (311)
T ss_dssp             CGGGCCHHHHHHSCBCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHT-----------------------CCCC
T ss_pred             CcccCCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcC-----------------------CCCC
Confidence            99999999999999999999999999999999999999987766555544331                       1111


Q ss_pred             CccccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCCCCC
Q 025467          156 PEGAASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLT  235 (252)
Q Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~t  235 (252)
                      |                                                       ...++++++||.+||+.||++|+|
T Consensus       254 p-------------------------------------------------------~~~s~~~~dli~~lL~~dp~~R~t  278 (311)
T 4aw0_A          254 P-------------------------------------------------------EKFFPKARDLVEKLLVLDATKRLG  278 (311)
T ss_dssp             C-------------------------------------------------------TTCCHHHHHHHHHHSCSSGGGSTT
T ss_pred             C-------------------------------------------------------cccCHHHHHHHHHHccCCHhHCcC
Confidence            1                                                       124568999999999999999999


Q ss_pred             HHH------HHcCCCCCCcc
Q 025467          236 ARE------ALRHPFFTRDH  249 (252)
Q Consensus       236 a~e------~l~hpwf~~~~  249 (252)
                      ++|      +++||||++..
T Consensus       279 ~~e~~~~~~i~~Hp~F~~id  298 (311)
T 4aw0_A          279 CEEMEGYGPLKAHPFFESVT  298 (311)
T ss_dssp             SGGGTCHHHHHTSGGGTTCC
T ss_pred             hHHHcCCHHHHCCCCcCCCC
Confidence            988      68999998753

>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*

Probab=100.00  E-value=9.4e-40  Score=266.18  Aligned_cols=144  Identities=33%  Similarity=0.529  Sum_probs=115.0

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCC---CCCccccCC
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERP---DQNYIVSTR   77 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~---~~~~~~~t~   77 (252)
                      ||+|||++||+||||||+|||++.                           ++.+||+|||+|+....   .....+||+
T Consensus       138 aL~ylH~~~IiHRDlKp~NILl~~---------------------------~g~vKl~DFGla~~~~~~~~~~~~~~GT~  190 (304)
T 3ubd_A          138 ALDHLHSLGIIYRDLKPENILLDE---------------------------EGHIKLTDFGLSKESIDHEKKAYSFCGTV  190 (304)
T ss_dssp             HHHHHHHTTCCCSSCCGGGEEECT---------------------------TSCEEEESSEEEEC-----CCCCSCCCCG
T ss_pred             HHHHHHHCCCcCCCCCHHHeEEcC---------------------------CCCEEecccccceeccCCCccccccccCc
Confidence            689999999999999999999944                           45677888887764322   223458999


Q ss_pred             CcccchhhhcCCCCccchhHhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHHHHHHhhcCCCCCCc
Q 025467           78 HYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPE  157 (252)
Q Consensus        78 ~y~aPE~l~~~~~~~~~Diws~G~~l~~l~~g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~  157 (252)
                      .|+|||++.+..|+.++||||+||++|+|++|..||.+.+..+.+..+....                       +..| 
T Consensus       191 ~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~~~~~~~i~~~~-----------------------~~~p-  246 (304)
T 3ubd_A          191 EYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAK-----------------------LGMP-  246 (304)
T ss_dssp             GGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCC-----------------------CCCC-
T ss_pred             ccCCHHHhccCCCCCCCcccchHHHHHHHHhCCCCCCCcCHHHHHHHHHcCC-----------------------CCCC-
Confidence            9999999999999999999999999999999999999877666555443211                       1111 


Q ss_pred             cccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCCCCC--
Q 025467          158 GAASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLT--  235 (252)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~t--  235 (252)
                                                                            ...++++.+||.+||+.||++|||  
T Consensus       247 ------------------------------------------------------~~~s~~~~~li~~~L~~dP~~R~ta~  272 (304)
T 3ubd_A          247 ------------------------------------------------------QFLSPEAQSLLRMLFKRNPANRLGAG  272 (304)
T ss_dssp             ------------------------------------------------------TTSCHHHHHHHHHHTCSSGGGSTTCS
T ss_pred             ------------------------------------------------------CcCCHHHHHHHHHHcccCHHHCCCCC
Confidence                                                                  124568999999999999999998  


Q ss_pred             ---HHHHHcCCCCCCcc
Q 025467          236 ---AREALRHPFFTRDH  249 (252)
Q Consensus       236 ---a~e~l~hpwf~~~~  249 (252)
                         ++|+++||||++..
T Consensus       273 ~~~~~eil~Hp~f~~id  289 (304)
T 3ubd_A          273 PDGVEEIKRHSFFSTID  289 (304)
T ss_dssp             TTTHHHHHTSGGGTTCC
T ss_pred             cCCHHHHHcCccccCCC
Confidence               58999999998753

>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}

Probab=100.00  E-value=1.8e-39  Score=263.22  Aligned_cols=146  Identities=21%  Similarity=0.440  Sum_probs=110.3

Q ss_pred             ChhhhhccC--ccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCC-CccccCC
Q 025467            1 MFAVMHDLC--MIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ-NYIVSTR   77 (252)
Q Consensus         1 aL~~lH~~~--ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~-~~~~~t~   77 (252)
                      ||+|||++|  ||||||||+|||++.                          ..+.+||+|||+|+...... ...+||+
T Consensus       141 aL~ylH~~~~~IiHRDlKp~NILl~~--------------------------~~g~vKl~DFGla~~~~~~~~~~~~GTp  194 (290)
T 3fpq_A          141 GLQFLHTRTPPIIHRDLKCDNIFITG--------------------------PTGSVKIGDLGLATLKRASFAKAVIGTP  194 (290)
T ss_dssp             HHHHHHTSSSCCCCCCCCGGGEEESS--------------------------TTSCEEECCTTGGGGCCTTSBEESCSSC
T ss_pred             HHHHHHHCCCCEEecccChhheeEEC--------------------------CCCCEEEEeCcCCEeCCCCccCCcccCc
Confidence            689999999  999999999999942                          23467888888886543322 2358999


Q ss_pred             CcccchhhhcCCCCccchhHhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHHHHHHhhcCCCCCCc
Q 025467           78 HYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPE  157 (252)
Q Consensus        78 ~y~aPE~l~~~~~~~~~Diws~G~~l~~l~~g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~  157 (252)
                      .|||||++.+ .|+.++||||+||++|+|++|..||.+......+...... +..|.                       
T Consensus       195 ~YmAPE~~~~-~y~~~~DiwSlGvilyelltg~~Pf~~~~~~~~~~~~i~~-~~~~~-----------------------  249 (290)
T 3fpq_A          195 EFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRVTS-GVKPA-----------------------  249 (290)
T ss_dssp             CCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHHHHHHHTT-TCCCG-----------------------
T ss_pred             cccCHHHcCC-CCCcHHHHHHHHHHHHHHHHCCCCCCCCCcHHHHHHHHHc-CCCCC-----------------------
Confidence            9999998865 6999999999999999999999999866554433221110 11110                       


Q ss_pred             cccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCCCCCHH
Q 025467          158 GAASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAR  237 (252)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~ta~  237 (252)
                                                                         ..+...++++.+||.+||+.||++|||++
T Consensus       250 ---------------------------------------------------~~~~~~~~~~~~li~~~L~~dP~~R~s~~  278 (290)
T 3fpq_A          250 ---------------------------------------------------SFDKVAIPEVKEIIEGCIRQNKDERYSIK  278 (290)
T ss_dssp             ---------------------------------------------------GGGGCCCHHHHHHHHHHSCSSGGGSCCHH
T ss_pred             ---------------------------------------------------CCCccCCHHHHHHHHHHccCChhHCcCHH
Confidence                                                               00122446899999999999999999999


Q ss_pred             HHHcCCCCCCc
Q 025467          238 EALRHPFFTRD  248 (252)
Q Consensus       238 e~l~hpwf~~~  248 (252)
                      |+|+||||++.
T Consensus       279 e~l~Hp~~~~~  289 (290)
T 3fpq_A          279 DLLNHAFFQEE  289 (290)
T ss_dssp             HHHTSGGGC--
T ss_pred             HHhcCccccCC
Confidence            99999999864

>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*

Probab=100.00  E-value=5.7e-40  Score=271.80  Aligned_cols=144  Identities=26%  Similarity=0.478  Sum_probs=116.4

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCC---CccccCC
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ---NYIVSTR   77 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~---~~~~~t~   77 (252)
                      ||+|||++|||||||||+|||++.                           ++.+||+|||+|+......   ...+||+
T Consensus       137 aL~ylH~~~IiHRDlKp~NILl~~---------------------------~g~vKl~DFGla~~~~~~~~~~~~~~GT~  189 (350)
T 4b9d_A          137 ALKHVHDRKILHRDIKSQNIFLTK---------------------------DGTVQLGDFGIARVLNSTVELARACIGTP  189 (350)
T ss_dssp             HHHHHHHTTCEETTCCGGGEEECT---------------------------TCCEEECSTTEESCCCHHHHHHHHHHSCC
T ss_pred             HHHHHHHCCeeeccCCHHHEEECC---------------------------CCCEEEcccccceeecCCcccccccCCCc
Confidence            689999999999999999999944                           4567888888877544321   2357999


Q ss_pred             CcccchhhhcCCCCccchhHhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHHHHHHhhcCCCCCCc
Q 025467           78 HYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPE  157 (252)
Q Consensus        78 ~y~aPE~l~~~~~~~~~Diws~G~~l~~l~~g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~  157 (252)
                      .|+|||++.+..|+.++||||+||++|+|++|+.||.+.+..+.+.++..  +..|                        
T Consensus       190 ~YmAPE~l~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~~~~~~~i~~--~~~~------------------------  243 (350)
T 4b9d_A          190 YYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAGSMKNLVLKIIS--GSFP------------------------  243 (350)
T ss_dssp             TTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHH--TCCC------------------------
T ss_pred             cccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHc--CCCC------------------------
Confidence            99999999999999999999999999999999999998776665554432  1111                        


Q ss_pred             cccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCCCCCHH
Q 025467          158 GAASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAR  237 (252)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~ta~  237 (252)
                                                                         ..+...++++.+||.+||+.||++|||++
T Consensus       244 ---------------------------------------------------~~~~~~s~~~~~li~~~L~~dP~~R~s~~  272 (350)
T 4b9d_A          244 ---------------------------------------------------PVSLHYSYDLRSLVSQLFKRNPRDRPSVN  272 (350)
T ss_dssp             ---------------------------------------------------CCCTTSCHHHHHHHHHHTCSSGGGSCCHH
T ss_pred             ---------------------------------------------------CCCccCCHHHHHHHHHHccCChhHCcCHH
Confidence                                                               00123456899999999999999999999


Q ss_pred             HHHcCCCCCCc
Q 025467          238 EALRHPFFTRD  248 (252)
Q Consensus       238 e~l~hpwf~~~  248 (252)
                      |+|+||||++.
T Consensus       273 e~l~hp~~~~~  283 (350)
T 4b9d_A          273 SILEKGFIAKR  283 (350)
T ss_dssp             HHHTSHHHHTT
T ss_pred             HHhcCHHhhcC
Confidence            99999999754

>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*

Probab=100.00  E-value=5.2e-38  Score=258.92  Aligned_cols=148  Identities=28%  Similarity=0.405  Sum_probs=112.3

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCC--------CCc
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD--------QNY   72 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~--------~~~   72 (252)
                      ||+|||++|||||||||+|||++.++                          ..+||+|||+|+.....        ...
T Consensus       162 aL~ylH~~~IiHRDlKp~NILl~~~g--------------------------~~vKl~DFGla~~~~~~~~~~~~~~~~~  215 (336)
T 4g3f_A          162 GLEYLHTRRILHGDVKADNVLLSSDG--------------------------SRAALCDFGHALCLQPDGLGKSLLTGDY  215 (336)
T ss_dssp             HHHHHHTTTEECSCCCGGGEEECTTS--------------------------CCEEECCCTTCEEC------------CC
T ss_pred             HHHHHHHCCceecccCHHHEEEeCCC--------------------------CEEEEeeCCCCeEccCCCcccceecCCc
Confidence            68999999999999999999995433                          14677777777643321        122


Q ss_pred             cccCCCcccchhhhcCCCCccchhHhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHHHHHHhhcCC
Q 025467           73 IVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGR  152 (252)
Q Consensus        73 ~~~t~~y~aPE~l~~~~~~~~~Diws~G~~l~~l~~g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~  152 (252)
                      .+||+.|||||++.+..|+.++||||+||++|+|++|+.||.+.+....+..+..  +++|                   
T Consensus       216 ~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~i~~--~~~~-------------------  274 (336)
T 4g3f_A          216 IPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRGPLCLKIAS--EPPP-------------------  274 (336)
T ss_dssp             CCCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSTTTCCSCCHHHHHH--SCCG-------------------
T ss_pred             cccCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHHc--CCCC-------------------
Confidence            4799999999999999999999999999999999999999987654433333222  1110                   


Q ss_pred             CCCCccccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCC
Q 025467          153 LDWPEGAASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTD  232 (252)
Q Consensus       153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~  232 (252)
                                                                            ....+...++++.+||.+||+.||.+
T Consensus       275 ------------------------------------------------------~~~~~~~~s~~~~~li~~~L~~dP~~  300 (336)
T 4g3f_A          275 ------------------------------------------------------IREIPPSCAPLTAQAIQEGLRKEPVH  300 (336)
T ss_dssp             ------------------------------------------------------GGGSCTTSCHHHHHHHHHHTCSSGGG
T ss_pred             ------------------------------------------------------chhcCccCCHHHHHHHHHHccCCHhH
Confidence                                                                  00112345678999999999999999


Q ss_pred             CCCHHHH-------------HcCCCCCCcc
Q 025467          233 RLTAREA-------------LRHPFFTRDH  249 (252)
Q Consensus       233 R~ta~e~-------------l~hpwf~~~~  249 (252)
                      ||||.|+             |+|||+...+
T Consensus       301 R~sa~el~~~l~~~l~~~~~l~hPw~~~~~  330 (336)
T 4g3f_A          301 RASAMELRRKVGKALQEVGGLKSPWKGEYK  330 (336)
T ss_dssp             SCCHHHHHHHHHHHHHHTTSSCSCSSSSCC
T ss_pred             CcCHHHHHHHHHHHHhhhhhccCCCcCCCC
Confidence            9999997             5799998653

>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*

Probab=100.00  E-value=1.5e-36  Score=247.76  Aligned_cols=157  Identities=24%  Similarity=0.336  Sum_probs=100.5

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCCCccccCCCcc
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYR   80 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~~~~~~t~~y~   80 (252)
                      ||+|||++||+||||||+|||++.++.+|++|||+|.............        ..    ..........+||+.||
T Consensus       130 al~ylH~~~IiHRDlKp~NILl~~~~~vKl~DFGla~~~~~~~~~~~~~--------~~----~~~~~~~~~~~GT~~Ym  197 (299)
T 4g31_A          130 AVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVL--------TP----MPAYARHTGQVGTKLYM  197 (299)
T ss_dssp             HHHHHHHTTCCCCCCCGGGEEECTTCCEEECCCCCC--------------------------------------CCCTTS
T ss_pred             HHHHHHHCcCccccCcHHHeEECCCCcEEEccCccceecCCCccccccc--------cc----cccccccCCcccCcccc
Confidence            6899999999999999999999766655555555543322111100000        00    00000112247999999


Q ss_pred             cchhhhcCCCCccchhHhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHh-CCCchHHHHHhhHHHHHHhhcCCCCCCccc
Q 025467           81 APEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVL-GPLPQHMLKRVDRHAEKYVRRGRLDWPEGA  159 (252)
Q Consensus        81 aPE~l~~~~~~~~~Diws~G~~l~~l~~g~~pf~~~~~~~~~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~  159 (252)
                      |||++.+..|+.++||||+||++|+|++   ||.+  ..+....+..+. +..|..+                       
T Consensus       198 APE~~~~~~y~~~~DiwSlGvilyell~---Pf~~--~~~~~~~~~~~~~~~~p~~~-----------------------  249 (299)
T 4g31_A          198 SPEQIHGNSYSHKVDIFSLGLILFELLY---PFST--QMERVRTLTDVRNLKFPPLF-----------------------  249 (299)
T ss_dssp             CHHHHTTCCCCTHHHHHHHHHHHHHHHS---CCSS--HHHHHHHHHHHHTTCCCHHH-----------------------
T ss_pred             CHHHHcCCCCCCHHHHHHHHHHHHHHcc---CCCC--ccHHHHHHHHHhcCCCCCCC-----------------------
Confidence            9999999999999999999999999995   7753  222332222221 1111111                       


Q ss_pred             cchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCCCCCHHHH
Q 025467          160 ASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREA  239 (252)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~ta~e~  239 (252)
                                                                          ...++.+.+||.+||+.||++||||.|+
T Consensus       250 ----------------------------------------------------~~~~~~~~~li~~~L~~dP~~Rps~~ei  277 (299)
T 4g31_A          250 ----------------------------------------------------TQKYPCEYVMVQDMLSPSPMERPEAINI  277 (299)
T ss_dssp             ----------------------------------------------------HHHCHHHHHHHHHHTCSSGGGSCCHHHH
T ss_pred             ----------------------------------------------------cccCHHHHHHHHHHcCCChhHCcCHHHH
Confidence                                                                1123467889999999999999999999


Q ss_pred             HcCCCCCCcc
Q 025467          240 LRHPFFTRDH  249 (252)
Q Consensus       240 l~hpwf~~~~  249 (252)
                      |+||||++..
T Consensus       278 l~h~~~~~~~  287 (299)
T 4g31_A          278 IENAVFEDLD  287 (299)
T ss_dssp             HTSGGGCCC-
T ss_pred             hcCHhhCCCC
Confidence            9999998753

>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*

Probab=100.00  E-value=4.7e-36  Score=257.12  Aligned_cols=205  Identities=33%  Similarity=0.487  Sum_probs=143.6

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCCCccccCCCcc
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYR   80 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~~~~~~t~~y~   80 (252)
                      ||+|||++||+||||||+|||++.++                         ...++|+|||++..........+||+.|+
T Consensus       212 aL~~LH~~~ivHrDlKp~NILl~~~~-------------------------~~~vkL~DFG~a~~~~~~~~~~~gt~~y~  266 (429)
T 3kvw_A          212 CLDALHKNRIIHCDLKPENILLKQQG-------------------------RSGIKVIDFGSSCYEHQRVYTYIQSRFYR  266 (429)
T ss_dssp             HHHHHHHHTEECSCCSGGGEEESSTT-------------------------SCCEEECCCTTCEETTCCCCSSCSCGGGC
T ss_pred             HHHHHHHCCeecCCCCHHHeEEccCC-------------------------CcceEEeecccceecCCcccccCCCCCcc
Confidence            68999999999999999999995432                         12378999998876655555568999999


Q ss_pred             cchhhhcCCCCccchhHhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHHHHHHhhcCCCCCCcccc
Q 025467           81 APEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAA  160 (252)
Q Consensus        81 aPE~l~~~~~~~~~Diws~G~~l~~l~~g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (252)
                      |||++.+..++.++||||+||++|+|++|..||.+.+..+.+..+....|.++..++....+....+...+...+.....
T Consensus       267 aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~  346 (429)
T 3kvw_A          267 APEVILGARYGMPIDMWSLGCILAELLTGYPLLPGEDEGDQLACMIELLGMPSQKLLDASKRAKNFVSSKGYPRYCTVTT  346 (429)
T ss_dssp             CHHHHHTBCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHTBTTHHHHBCTTSCBTTSCEEC
T ss_pred             ChHHHhCCCCCchHHHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCCHHHHHhhhhhhhccCCCCCcccccccc
Confidence            99999999999999999999999999999999999999999999999999999998887766555544443222211100


Q ss_pred             chhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCCCCCHHHHH
Q 025467          161 SRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREAL  240 (252)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~ta~e~l  240 (252)
                      ..........        ...........   ..        ............++++.+||.+||++||++||||+|+|
T Consensus       347 ~~~~~~~~~~--------~~~~~~~~~~~---~~--------~~~~~~~l~~~~~~~~~dli~~~L~~dP~~Rpta~e~L  407 (429)
T 3kvw_A          347 LSDGSVVLNG--------GRSRRGKLRGP---PE--------SREWGNALKGCDDPLFLDFLKQCLEWDPAVRMTPGQAL  407 (429)
T ss_dssp             CCC--CEECC--------EECTTCCEECS---TT--------CSCHHHHTTTCCCHHHHHHHHHHTCSSTTTSCCHHHHH
T ss_pred             cccccccccc--------cccchhhccCC---cc--------chhhHhhccccchHHHHHHHHHHCCCChhhCCCHHHHh
Confidence            0000000000        00000000000   00        00001111234567899999999999999999999999


Q ss_pred             cCCCCCCcc
Q 025467          241 RHPFFTRDH  249 (252)
Q Consensus       241 ~hpwf~~~~  249 (252)
                      +||||++..
T Consensus       408 ~Hpw~~~~~  416 (429)
T 3kvw_A          408 RHPWLRRRL  416 (429)
T ss_dssp             TSTTTC---
T ss_pred             CChhhccCC
Confidence            999999764

>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*

Probab=100.00  E-value=1.8e-35  Score=255.72  Aligned_cols=184  Identities=30%  Similarity=0.538  Sum_probs=132.8

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCC--CCccccCCC
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD--QNYIVSTRH   78 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~--~~~~~~t~~   78 (252)
                      ||+|||++||+||||||+|||++.                           .+.+||+|||+++.....  ....+||+.
T Consensus       176 aL~~lH~~~iiHrDlkp~NIll~~---------------------------~~~~kl~DFG~a~~~~~~~~~~~~~gt~~  228 (464)
T 3ttj_A          176 GIKHLHSAGIIHRDLKPSNIVVKS---------------------------DCTLKILDFGLARTAGTSFMMTPYVVTRY  228 (464)
T ss_dssp             HHHHHHHTTCCCCCCCGGGEEECT---------------------------TSCEEECCCCCC-----CCCC----CCCT
T ss_pred             HHHHHHHCCcccCCCChHhEEEeC---------------------------CCCEEEEEEEeeeecCCCcccCCCccccc
Confidence            689999999999999999999944                           445778888877654332  233578999


Q ss_pred             cccchhhhcCCCCccchhHhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHHHHHHhhcCCCCCCcc
Q 025467           79 YRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEG  158 (252)
Q Consensus        79 y~aPE~l~~~~~~~~~Diws~G~~l~~l~~g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~  158 (252)
                      |+|||++.+..|+.++||||+||++|+|++|+.||.+.+..+++..+...+|.++.+++.........+...... +...
T Consensus       229 y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pF~g~~~~~~~~~i~~~lg~p~~~~~~~~~~~~~~~~~~~~~-~~~~  307 (464)
T 3ttj_A          229 YRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPK-YAGL  307 (464)
T ss_dssp             TCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCSCCHHHHTTSCHHHHHHHTTSCC-CCCC
T ss_pred             ccCHHHHcCCCCCHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHcchhhhhHhhcccc-cCCC
Confidence            999999999999999999999999999999999999999999999999999999888877666555544433211 1000


Q ss_pred             ccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCCCCCHHH
Q 025467          159 AASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTARE  238 (252)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~ta~e  238 (252)
                           .+....  +..               ..             ..........++++.+||.+||++||++||||+|
T Consensus       308 -----~~~~~~--~~~---------------~~-------------~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e  352 (464)
T 3ttj_A          308 -----TFPKLF--PDS---------------LF-------------PADSEHNKLKASQARDLLSKMLVIDPAKRISVDD  352 (464)
T ss_dssp             -----CHHHHS--CGG---------------GS-------------CCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHH
T ss_pred             -----ChHHhC--ccc---------------cc-------------ccccccccccCHHHHHHHHHHcCCChhhCCCHHH
Confidence                 000000  000               00             0000011223568999999999999999999999


Q ss_pred             HHcCCCCCC
Q 025467          239 ALRHPFFTR  247 (252)
Q Consensus       239 ~l~hpwf~~  247 (252)
                      +|+||||+.
T Consensus       353 ~L~Hp~~~~  361 (464)
T 3ttj_A          353 ALQHPYINV  361 (464)
T ss_dssp             HHTSTTTGG
T ss_pred             HhcChhhhh
Confidence            999999974

>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A

Probab=100.00  E-value=2.4e-36  Score=266.73  Aligned_cols=149  Identities=32%  Similarity=0.484  Sum_probs=120.5

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCC--CccccCCC
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ--NYIVSTRH   78 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~--~~~~~t~~   78 (252)
                      ||+|||++||+||||||+|||++.+                         ..+.+||+|||+++......  ...+||+.
T Consensus       267 al~ylH~~~iiHRDlKp~Nill~~~-------------------------~~~~vKl~DFG~a~~~~~~~~~~~~~GT~~  321 (573)
T 3uto_A          267 GLCHMHENNYVHLDLKPENIMFTTK-------------------------RSNELKLIDFGLTAHLDPKQSVKVTTGTAE  321 (573)
T ss_dssp             HHHHHHHTTEECCCCCGGGEEESSS-------------------------SCCCEEECCCSSCEECCTTSEEEEECSSGG
T ss_pred             HHHHHHHCCeeeccCChhhccccCC-------------------------CCCCEEEeeccceeEccCCCceeeeEECcc
Confidence            6899999999999999999999542                         23568899999887654433  23589999


Q ss_pred             cccchhhhcCCCCccchhHhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHHHHHHhhcCCCCCCcc
Q 025467           79 YRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEG  158 (252)
Q Consensus        79 y~aPE~l~~~~~~~~~Diws~G~~l~~l~~g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~  158 (252)
                      |+|||++.+..|+.++||||+||++|+|++|..||.+.+..+.+..+......++.                        
T Consensus       322 y~APEv~~~~~y~~~~DiWSlGvilyeml~G~~Pf~~~~~~~~~~~i~~~~~~~~~------------------------  377 (573)
T 3uto_A          322 FAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDWNMDD------------------------  377 (573)
T ss_dssp             GCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHTTCCCCCS------------------------
T ss_pred             ccCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHhCCCCCCc------------------------
Confidence            99999999999999999999999999999999999988776665554332221111                        


Q ss_pred             ccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCCCCCHHH
Q 025467          159 AASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTARE  238 (252)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~ta~e  238 (252)
                                                                        ..+...++++++||.+||+.||.+||||.|
T Consensus       378 --------------------------------------------------~~~~~~s~~~~dli~~~L~~dp~~R~t~~e  407 (573)
T 3uto_A          378 --------------------------------------------------SAFSGISEDGKDFIRKLLLADPNTRMTIHQ  407 (573)
T ss_dssp             --------------------------------------------------GGGTTSCHHHHHHHHTTSCSSGGGSCCHHH
T ss_pred             --------------------------------------------------ccccCCCHHHHHHHHHHccCChhHCcCHHH
Confidence                                                              111335678999999999999999999999


Q ss_pred             HHcCCCCCCc
Q 025467          239 ALRHPFFTRD  248 (252)
Q Consensus       239 ~l~hpwf~~~  248 (252)
                      +|+||||+..
T Consensus       408 ~l~Hpw~~~~  417 (573)
T 3uto_A          408 ALEHPWLTPG  417 (573)
T ss_dssp             HHHSTTTSCC
T ss_pred             HhcCcCcCCC
Confidence            9999999864

>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=2.8e-35  Score=247.60  Aligned_cols=173  Identities=33%  Similarity=0.588  Sum_probs=135.5

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCCCccccCCCcc
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYR   80 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~~~~~~t~~y~   80 (252)
                      ||+|||++||+||||||+|||++                           .++.+||+|||+++.........++|+.|+
T Consensus       140 ~L~~LH~~~ivH~Dlkp~NIll~---------------------------~~~~~kl~Dfg~a~~~~~~~~~~~~t~~y~  192 (367)
T 1cm8_A          140 GLRYIHAAGIIHRDLKPGNLAVN---------------------------EDCELKILDFGLARQADSEMTGYVVTRWYR  192 (367)
T ss_dssp             HHHHHHHTTEECCCCCGGGEEEC---------------------------TTCCEEECCCTTCEECCSSCCSSCSCGGGC
T ss_pred             HHHHHHHCCccccCcCHHHEEEc---------------------------CCCCEEEEeeecccccccccCcCcCCCCcC
Confidence            68999999999999999999994                           344678888888876555445567899999


Q ss_pred             cchhhhc-CCCCccchhHhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHHH-HHHhhcCCCCCCcc
Q 025467           81 APEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHA-EKYVRRGRLDWPEG  158 (252)
Q Consensus        81 aPE~l~~-~~~~~~~Diws~G~~l~~l~~g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~-~~~~~~~~~~~~~~  158 (252)
                      |||++.+ ..++.++||||+||++++|++|..||.+.+..+++..+....|.+|.+++..+.... ..+...- ...+. 
T Consensus       193 aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~-~~~~~-  270 (367)
T 1cm8_A          193 APEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQRLQSDEAKNYMKGL-PELEK-  270 (367)
T ss_dssp             CTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHTCSCHHHHHHHHHS-CCCCC-
T ss_pred             CHHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHhhhHHHHHHHHhC-CCCCC-
Confidence            9999987 578999999999999999999999999999999999999999999988876553321 1111110 00000 


Q ss_pred             ccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCCCCCHHH
Q 025467          159 AASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTARE  238 (252)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~ta~e  238 (252)
                                                                    ..........++++.+||.+||++||.+|||++|
T Consensus       271 ----------------------------------------------~~~~~~~~~~~~~~~~ll~~mL~~dP~~R~t~~e  304 (367)
T 1cm8_A          271 ----------------------------------------------KDFASILTNASPLAVNLLEKMLVLDAEQRVTAGE  304 (367)
T ss_dssp             ----------------------------------------------CCGGGTCTTCCHHHHHHHHHHSCSSTTTSCCHHH
T ss_pred             ----------------------------------------------CCHHHHCCCCCHHHHHHHHHHccCChhHCCCHHH
Confidence                                                          0001112345678999999999999999999999


Q ss_pred             HHcCCCCCCc
Q 025467          239 ALRHPFFTRD  248 (252)
Q Consensus       239 ~l~hpwf~~~  248 (252)
                      +|+||||+..
T Consensus       305 ~l~hp~f~~~  314 (367)
T 1cm8_A          305 ALAHPYFESL  314 (367)
T ss_dssp             HHHSGGGTTT
T ss_pred             HhcChHHHhh
Confidence            9999999865

>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A

Probab=100.00  E-value=4.6e-36  Score=265.14  Aligned_cols=146  Identities=29%  Similarity=0.476  Sum_probs=111.7

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCC-CCccccCCCc
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD-QNYIVSTRHY   79 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~-~~~~~~t~~y   79 (252)
                      ||+|||++|||||||||+|||++                           ..+.+||+|||+|+..... ....+||+.|
T Consensus       304 aL~yLH~~gIiHRDLKPeNILld---------------------------~~G~vKL~DFGlA~~~~~~~~~t~~GTp~Y  356 (689)
T 3v5w_A          304 GLEHMHNRFVVYRDLKPANILLD---------------------------EHGHVRISDLGLACDFSKKKPHASVGTHGY  356 (689)
T ss_dssp             HHHHHHTTTEECCCCSGGGEEEC---------------------------TTSCEEECCCTTCEECSSCCCCSCCSCGGG
T ss_pred             HHHHHHHCCccccCCchHHeEEe---------------------------CCCCEEecccceeeecCCCCCCCccCCcCc
Confidence            68999999999999999999994                           4556788888887654333 2346899999


Q ss_pred             ccchhhhc-CCCCccchhHhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHHHHHHhhcCCCCCCcc
Q 025467           80 RAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEG  158 (252)
Q Consensus        80 ~aPE~l~~-~~~~~~~Diws~G~~l~~l~~g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~  158 (252)
                      +|||++.. ..|+.++||||+||++|+|++|.+||.+.+..+....+..+.                    .....+   
T Consensus       357 mAPEvl~~~~~y~~~vDiWSLGvilYEmLtG~~PF~~~~~~~~~~i~~~i~--------------------~~~~~~---  413 (689)
T 3v5w_A          357 MAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTL--------------------TMAVEL---  413 (689)
T ss_dssp             CCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCTTCGGGCCCHHHHHHHHH--------------------HCCCCC---
T ss_pred             cCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhhc--------------------CCCCCC---
Confidence            99999974 579999999999999999999999997543211111111110                    111111   


Q ss_pred             ccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCCCCC---
Q 025467          159 AASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLT---  235 (252)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~t---  235 (252)
                                                                          +...++++++||.+||+.||.+|+|   
T Consensus       414 ----------------------------------------------------p~~~S~~a~dLI~~lL~~dP~~Rl~~~~  441 (689)
T 3v5w_A          414 ----------------------------------------------------PDSFSPELRSLLEGLLQRDVNRRLGCLG  441 (689)
T ss_dssp             ----------------------------------------------------CTTSCHHHHHHHHHHTCSCGGGCTTCSS
T ss_pred             ----------------------------------------------------CccCCHHHHHHHHHHccCCHhHCCCCCC
Confidence                                                                1235678999999999999999998   


Q ss_pred             --HHHHHcCCCCCCc
Q 025467          236 --AREALRHPFFTRD  248 (252)
Q Consensus       236 --a~e~l~hpwf~~~  248 (252)
                        |+|+++||||++.
T Consensus       442 ~ga~ei~~HpfF~~i  456 (689)
T 3v5w_A          442 RGAQEVKESPFFRSL  456 (689)
T ss_dssp             STHHHHTTSGGGTTC
T ss_pred             CCHHHHhcCccccCC
Confidence              8999999999875

>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}

Probab=100.00  E-value=4.7e-35  Score=247.94  Aligned_cols=213  Identities=27%  Similarity=0.444  Sum_probs=130.1

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCCCccccCCCcc
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYR   80 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~~~~~~t~~y~   80 (252)
                      ||+|||++||+||||||+|||++.++.++++|||++.......................+.   .........+||+.|+
T Consensus       121 ~L~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~gt~~y~  197 (388)
T 3oz6_A          121 VIKYLHSGGLLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNIPLSINENTENFD---DDQPILTDYVATRWYR  197 (388)
T ss_dssp             HHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEESSSCCCCCCCGGGCCC------------------CCCGGGGC
T ss_pred             HHHHHHhCCEEeCCCCHHHeEEcCCCCEEecCCcccccccccccccccccccccccccccc---cccccccCCcccCCcC
Confidence            6899999999999999999999777666666666654322111000000000000000000   0001112347899999


Q ss_pred             cchhhhc-CCCCccchhHhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHH-HHHHhhcCCCCCCcc
Q 025467           81 APEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRH-AEKYVRRGRLDWPEG  158 (252)
Q Consensus        81 aPE~l~~-~~~~~~~Diws~G~~l~~l~~g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~-~~~~~~~~~~~~~~~  158 (252)
                      |||++.+ ..++.++||||+||++|+|++|.+||.+.+..+++..+....+.++.+.+...... ...+           
T Consensus       198 aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~~~~~~~~~-----------  266 (388)
T 3oz6_A          198 APEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGSSTMNQLERIIGVIDFPSNEDVESIQSPFAKTM-----------  266 (388)
T ss_dssp             CHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCHHHHHTSCCSSHHHH-----------
T ss_pred             CHHHhcCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHhccCHHHHHH-----------
Confidence            9999987 57899999999999999999999999999999999999999998887665433210 0000           


Q ss_pred             ccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCCCCCHHH
Q 025467          159 AASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTARE  238 (252)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~ta~e  238 (252)
                            +.................+..+..               ...........++++.+||.+||++||++||||+|
T Consensus       267 ------~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~~~~~~~dll~~~L~~dP~~R~t~~e  325 (388)
T 3oz6_A          267 ------IESLKEKVEIRQSNKRDIFTKWKN---------------LLLKINPKADCNEEALDLLDKLLQFNPNKRISAND  325 (388)
T ss_dssp             ------HHHHHHHCC-----CCCCHHHHHH---------------HHHHHCTTCCCCHHHHHHHHHHCCSSGGGSCCHHH
T ss_pred             ------HHhCcccccccCCCHHHhCcchhh---------------hcccccccccCCHHHHHHHHHhhccCcccCCCHHH
Confidence                  000000000000000000000000               00001122356789999999999999999999999


Q ss_pred             HHcCCCCCCc
Q 025467          239 ALRHPFFTRD  248 (252)
Q Consensus       239 ~l~hpwf~~~  248 (252)
                      +|+||||+..
T Consensus       326 ~l~Hp~~~~~  335 (388)
T 3oz6_A          326 ALKHPFVSIF  335 (388)
T ss_dssp             HTTSTTTTTT
T ss_pred             HhCCHHHHHh
Confidence            9999999754

>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}

Probab=100.00  E-value=3.4e-35  Score=239.77  Aligned_cols=97  Identities=28%  Similarity=0.424  Sum_probs=75.3

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCC-----CCcccc
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD-----QNYIVS   75 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~-----~~~~~~   75 (252)
                      ||+|||+++||||||||+|||++.+                           +.+||+|||+|+.....     ....+|
T Consensus       144 gL~yLH~~~IiHRDlKp~NILl~~~---------------------------~~~Ki~DFGla~~~~~~~~~~~~~~~~G  196 (307)
T 3omv_A          144 GMDYLHAKNIIHRDMKSNNIFLHEG---------------------------LTVKIGDFGLATVKSRWSGSQQVEQPTG  196 (307)
T ss_dssp             HHHHHHHTTCBCSCCCSSSEEEETT---------------------------EEEEECCCSSCBC------------CCC
T ss_pred             HHHHHHHCCccCCccCHHHEEECCC---------------------------CcEEEeeccCceecccCCcceeeccccc
Confidence            6899999999999999999999554                           45667777766543221     123579


Q ss_pred             CCCcccchhhhc---CCCCccchhHhHHHHHHHHHhCCCCCCCCChHHHHHH
Q 025467           76 TRHYRAPEVILG---LGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAM  124 (252)
Q Consensus        76 t~~y~aPE~l~~---~~~~~~~Diws~G~~l~~l~~g~~pf~~~~~~~~~~~  124 (252)
                      |+.|||||++.+   ..|+.++|||||||++|+|++|+.||.+.+....+..
T Consensus       197 T~~ymAPE~l~~~~~~~y~~ksDVwS~Gvvl~Elltg~~Pf~~~~~~~~~~~  248 (307)
T 3omv_A          197 SVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQIIF  248 (307)
T ss_dssp             CTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHH
T ss_pred             CCCccCHHHhhccCCCCCCcHHHhHhHHHHHHHHHHCCCCCCCCChHHHHHH
Confidence            999999999974   3589999999999999999999999987766554443

>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}

Probab=100.00  E-value=6.9e-35  Score=244.38  Aligned_cols=209  Identities=39%  Similarity=0.663  Sum_probs=140.6

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCCCccccCCCcc
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYR   80 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~~~~~~t~~y~   80 (252)
                      ||+|||++||+||||||+|||++........ ...... ...............++|+|||.+...........||+.|+
T Consensus       149 aL~~LH~~~ivHrDlkp~NIll~~~~~~~~~-~~~~~~-~~~~~~~~~~~~~~~~kl~DFG~a~~~~~~~~~~~gt~~y~  226 (360)
T 3llt_A          149 ALNYLRKMSLTHTDLKPENILLDDPYFEKSL-ITVRRV-TDGKKIQIYRTKSTGIKLIDFGCATFKSDYHGSIINTRQYR  226 (360)
T ss_dssp             HHHHHHHTTEECSCCSGGGEEESCTTCCEEE-EEEECT-TTCCEEEEEEESCCCEEECCCTTCEETTSCCCSCCSCGGGC
T ss_pred             HHHHHHHCCeeeCCCCcccEEEccccccccc-cchhcc-cccccccccccCCCCEEEEeccCceecCCCCcCccCccccc
Confidence            6899999999999999999999643110000 000000 00000000001256789999999987666555668999999


Q ss_pred             cchhhhcCCCCccchhHhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHHHH-HHhhcC--CCCCCc
Q 025467           81 APEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAE-KYVRRG--RLDWPE  157 (252)
Q Consensus        81 aPE~l~~~~~~~~~Diws~G~~l~~l~~g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~-~~~~~~--~~~~~~  157 (252)
                      |||++.+..++.++||||+||++|+|++|..||.+.+..+.+..+....+++|..+......... .+....  ...++.
T Consensus       227 aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~p~  306 (360)
T 3llt_A          227 APEVILNLGWDVSSDMWSFGCVLAELYTGSLLFRTHEHMEHLAMMESIIQPIPKNMLYEATKTNGSKYVNKDELKLAWPE  306 (360)
T ss_dssp             CHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHTCCCCHHHHHHHTTSGGGGGEETTTTEECTTT
T ss_pred             CcHHHcCCCCCCccchHHHHHHHHHHHHCCCCCCCCcHHHHHHHHHHhcCCCCHHHHhhhhhccCccccCcccceecCcc
Confidence            99999999999999999999999999999999999999999999999999999877654432111 111110  111111


Q ss_pred             cccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCCCCCHH
Q 025467          158 GAASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAR  237 (252)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~ta~  237 (252)
                      ..........                                   ............++.+.+||.+||++||++||||+
T Consensus       307 ~~~~~~~~~~-----------------------------------~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpta~  351 (360)
T 3llt_A          307 NASSINSIKH-----------------------------------VKKCLPLYKIIKHELFCDFLYSILQIDPTLRPSPA  351 (360)
T ss_dssp             TCSCHHHHHH-----------------------------------HHTCCCHHHHCCCHHHHHHHHHHCCSSGGGSCCHH
T ss_pred             cccchhhhhh-----------------------------------hhhcccccccchHHHHHHHHHHHhcCChhhCCCHH
Confidence            1111111000                                   01111122233457899999999999999999999


Q ss_pred             HHHcCCCCC
Q 025467          238 EALRHPFFT  246 (252)
Q Consensus       238 e~l~hpwf~  246 (252)
                      |+|+||||+
T Consensus       352 elL~hp~f~  360 (360)
T 3llt_A          352 ELLKHKFLE  360 (360)
T ss_dssp             HHTTSGGGC
T ss_pred             HHhcCcccC
Confidence            999999996

>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...

Probab=100.00  E-value=5e-35  Score=245.95  Aligned_cols=173  Identities=31%  Similarity=0.566  Sum_probs=124.0

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCCCccccCCCcc
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYR   80 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~~~~~~t~~y~   80 (252)
                      ||+|||++||+||||||+|||++.                           .+.++|+|||+++.........+||..|+
T Consensus       144 aL~~LH~~givH~Dlkp~NIll~~---------------------------~~~~kL~DFG~a~~~~~~~~~~~~t~~y~  196 (367)
T 2fst_X          144 GLKYIHSADIIHRDLKPSNLAVNE---------------------------DCELKILDFGLARHTADEMTGYVATRWYR  196 (367)
T ss_dssp             HHHHHHHTTCCCCCCCGGGEEECT---------------------------TCCEEECC---------------CCCTTC
T ss_pred             HHHHHHHCCeeeCCCCHhhEEECC---------------------------CCCEEEeeccccccccccCCCcCcCcCcc
Confidence            689999999999999999999944                           44577888887765544444457899999


Q ss_pred             cchhhhc-CCCCccchhHhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHHH-HHHhhcCCCCCCcc
Q 025467           81 APEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHA-EKYVRRGRLDWPEG  158 (252)
Q Consensus        81 aPE~l~~-~~~~~~~Diws~G~~l~~l~~g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~-~~~~~~~~~~~~~~  158 (252)
                      |||++.+ ..++.++||||+||++|+|++|..||.+.+..+++..+....|.++.+.+....... ..+... ....+..
T Consensus       197 aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~-~~~~~~~  275 (367)
T 2fst_X          197 APEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQS-LTQMPKM  275 (367)
T ss_dssp             CHHHHTTCCSCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHTTCCCHHHHHHHHT-SCCCCCC
T ss_pred             ChHHHcCCcCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHHhhhHHHHHHHhc-cCCCCCC
Confidence            9999987 578999999999999999999999999999999999999999998877655443211 111111 0000000


Q ss_pred             ccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCCCCCHHH
Q 025467          159 AASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTARE  238 (252)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~ta~e  238 (252)
                                                                     .........++++.+||.+||++||.+|||++|
T Consensus       276 -----------------------------------------------~~~~~~~~~~~~~~dLl~~mL~~dP~~R~t~~e  308 (367)
T 2fst_X          276 -----------------------------------------------NFANVFIGANPLAVDLLEKMLVLDSDKRITAAQ  308 (367)
T ss_dssp             -----------------------------------------------CHHHHTTTCCHHHHHHHHHHSCSSGGGSCCHHH
T ss_pred             -----------------------------------------------CHHHHCCCCCHHHHHHHHHhCCCCcccCcCHHH
Confidence                                                           000111345678999999999999999999999


Q ss_pred             HHcCCCCCCc
Q 025467          239 ALRHPFFTRD  248 (252)
Q Consensus       239 ~l~hpwf~~~  248 (252)
                      +|+||||+..
T Consensus       309 ~L~hp~~~~~  318 (367)
T 2fst_X          309 ALAHAYFAQY  318 (367)
T ss_dssp             HHTSGGGTTT
T ss_pred             HhcChhhhhc
Confidence            9999999864

>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}

Probab=100.00  E-value=1.1e-34  Score=250.63  Aligned_cols=202  Identities=28%  Similarity=0.440  Sum_probs=128.3

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccc---cCCCCCCceEEeecCCccccCCCCCccccCC
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYF---KRMPKSSAIKVIDFGSTTYERPDQNYIVSTR   77 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~---~~~~~~~~~~l~dfg~~~~~~~~~~~~~~t~   77 (252)
                      ||+|||++||+||||||+|||++.++.++|+|||++..........   ..........+.+++............+||+
T Consensus       168 aL~~LH~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~  247 (458)
T 3rp9_A          168 GVKYVHSAGILHRDLKPANCLVNQDCSVKVCDFGLARTVDYPENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTR  247 (458)
T ss_dssp             HHHHHHHTTCBCCCCCGGGEEECTTCCEEECCCTTCBCTTSCTTCCCCCC---------------------------CCC
T ss_pred             HHHHHHhCCcCCCCCChhhEEECCCCCEeecccccchhccCccccccccccCccccccccccccccccccccccCCcccc
Confidence            6899999999999999999999888888888888886643222110   0001111123333333322222333457899


Q ss_pred             Ccccchhhh-cCCCCccchhHhHHHHHHHHHh-----------CCCCCCCCC--------------------hHHHHHHH
Q 025467           78 HYRAPEVIL-GLGWTYPCDIWSVGCILVELCT-----------GEALFQTHE--------------------NLEHLAMM  125 (252)
Q Consensus        78 ~y~aPE~l~-~~~~~~~~Diws~G~~l~~l~~-----------g~~pf~~~~--------------------~~~~~~~~  125 (252)
                      .|+|||++. ...|+.++||||+||++|+|++           |.++|.+.+                    ..+++..+
T Consensus       248 ~Y~aPE~~~~~~~~~~~~DiwSlG~il~elltg~~~~~~~~~~~~p~f~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i  327 (458)
T 3rp9_A          248 WYRAPELILLQENYTEAIDVWSIGCIFAELLNMIKENVAYHADRGPLFPGSSCFPLSPDQKAGNDFKFHTRGNRDQLNVI  327 (458)
T ss_dssp             TTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHTTSTTTCSSGGGCCCSCC--------------------CHHHHHHHHHH
T ss_pred             cccChHHhhCCCCCCcHhHHHHHHHHHHHHHHhccccccccccccccCCCCccccccccccccccccccccCCHHHHHHH
Confidence            999999875 4569999999999999999998           677776543                    35778889


Q ss_pred             HHHhCCCchHHHHHhhHHHHHHhhcCCCCCCccccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhh
Q 025467          126 ERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQN  205 (252)
Q Consensus       126 ~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  205 (252)
                      ..++|.++.+.+..+.................                                               .
T Consensus       328 ~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~-----------------------------------------------~  360 (458)
T 3rp9_A          328 FNILGTPSEEDIEALEKEDAKRYIRIFPKREG-----------------------------------------------T  360 (458)
T ss_dssp             HHHHCCCCHHHHHTSSCHHHHHHHTTSCCCCC-----------------------------------------------C
T ss_pred             HHHcCCCCHHHHhhcCCHHHHHHHHhcCCCCC-----------------------------------------------C
Confidence            99999999877665543221111111000000                                               0


Q ss_pred             hhhhccccchhhHHHHHHHhccCCCCCCCCHHHHHcCCCCCCcc
Q 025467          206 LIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRDH  249 (252)
Q Consensus       206 ~~~~~~~~~~~~~~~ll~~~L~~dP~~R~ta~e~l~hpwf~~~~  249 (252)
                      .........+.++.+||.+||++||++|||++|+|+||||+...
T Consensus       361 ~~~~~~~~~s~~~~dLl~~mL~~dP~~R~t~~e~L~Hp~f~~~~  404 (458)
T 3rp9_A          361 DLAERFPASSADAIHLLKRMLVFNPNKRITINECLAHPFFKEVR  404 (458)
T ss_dssp             CGGGGSTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGTTTC
T ss_pred             CHHHHCCCCCHHHHHHHHHHhccCccccCCHHHHhcCHhhhhcC
Confidence            00112234567899999999999999999999999999998763

>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}

Probab=100.00  E-value=7.7e-35  Score=239.14  Aligned_cols=171  Identities=30%  Similarity=0.553  Sum_probs=125.8

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCC--CccccCCC
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ--NYIVSTRH   78 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~--~~~~~t~~   78 (252)
                      ||+|||++||+||||||+|||++.                           .+.++|+|||.+.......  ....||+.
T Consensus       132 al~~lH~~~ivH~Dlkp~Nil~~~---------------------------~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~  184 (308)
T 3g33_A          132 GLDFLHANCIVHRDLKPENILVTS---------------------------GGTVKLADFGLARIYSYQMALTPVVVTLW  184 (308)
T ss_dssp             HHHHHHHTTCCCSCCCTTTEEECT---------------------------TSCEEECSCSCTTTSTTCCCSGGGGCCCS
T ss_pred             HHHHHHHCCcccCCCCHHHEEEcC---------------------------CCCEEEeeCccccccCCCcccCCcccccc
Confidence            689999999999999999999944                           4457777888776443322  23578999


Q ss_pred             cccchhhhcCCCCccchhHhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHHHHHHhhcCCCCCCcc
Q 025467           79 YRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEG  158 (252)
Q Consensus        79 y~aPE~l~~~~~~~~~Diws~G~~l~~l~~g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~  158 (252)
                      |+|||++.+..++.++||||+||++|+|++|..||.+.+..+.+..+....+.++...+                  +..
T Consensus       185 y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~------------------~~~  246 (308)
T 3g33_A          185 YRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDW------------------PRD  246 (308)
T ss_dssp             SCCHHHHHTSCCCSTHHHHHHHHHHHHTTTSSCSCCCSSHHHHHHHHHHHHCCCCTTTS------------------CSS
T ss_pred             ccCchHHcCCCCCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhc------------------cch
Confidence            99999999999999999999999999999999999999988899988888887664221                  110


Q ss_pred             ccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCCCCCHHH
Q 025467          159 AASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTARE  238 (252)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~ta~e  238 (252)
                      ......     ..+.                            .............++++.+||.+||++||++|||+.|
T Consensus       247 ~~~~~~-----~~~~----------------------------~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e  293 (308)
T 3g33_A          247 VSLPRG-----AFPP----------------------------RGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFR  293 (308)
T ss_dssp             CSSCGG-----GSCC----------------------------CCCCCHHHHSCSCCHHHHHHHHHHTCSSTTTSCCHHH
T ss_pred             hhcccc-----ccCC----------------------------CCCCcHHHhCccccHHHHHHHHHHhcCCCccCCCHHH
Confidence            000000     0000                            0000111223456789999999999999999999999


Q ss_pred             HHcCCCCCCcc
Q 025467          239 ALRHPFFTRDH  249 (252)
Q Consensus       239 ~l~hpwf~~~~  249 (252)
                      +|+||||+...
T Consensus       294 ~l~h~~~~~~~  304 (308)
T 3g33_A          294 ALQHSYLHKDE  304 (308)
T ss_dssp             HHTSTTC----
T ss_pred             HhcCccccCCC
Confidence            99999999764

>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*

Probab=100.00  E-value=1.9e-34  Score=243.68  Aligned_cols=209  Identities=31%  Similarity=0.510  Sum_probs=135.9

Q ss_pred             Chhhhhc--cCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCCCccccCCC
Q 025467            1 MFAVMHD--LCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRH   78 (252)
Q Consensus         1 aL~~lH~--~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~~~~~~t~~   78 (252)
                      ||+|||+  .||+||||||+|||+..                         +....++|+|||++...........||+.
T Consensus       169 al~~lH~~~~~ivHrDlkp~NIll~~-------------------------~~~~~~kL~DFG~a~~~~~~~~~~~~t~~  223 (382)
T 2vx3_A          169 ALLFLATPELSIIHCDLKPENILLCN-------------------------PKRSAIKIVDFGSSCQLGQRIYQYIQSRF  223 (382)
T ss_dssp             HHHHHTSTTTCEECCCCSGGGEEESS-------------------------TTSCCEEECCCTTCEETTCCCCSSCSCGG
T ss_pred             HHHHhccCCCCEEcCCCCcccEEEec-------------------------CCCCcEEEEeccCceecccccccccCCcc
Confidence            6889994  78999999999999953                         22456889999998776555555688999


Q ss_pred             cccchhhhcCCCCccchhHhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHHHHHHhhcCCCCCCcc
Q 025467           79 YRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEG  158 (252)
Q Consensus        79 y~aPE~l~~~~~~~~~Diws~G~~l~~l~~g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~  158 (252)
                      |+|||++.+..++.++||||+||++|+|++|..||.+.+..+.+..+....+.+|..+..........+..-....+...
T Consensus       224 y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  303 (382)
T 2vx3_A          224 YRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGANEVDQMNKIVEVLGIPPAHILDQAPKARKFFEKLPDGTWNLK  303 (382)
T ss_dssp             GCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCSCCHHHHTTCTTHHHHEEECTTSCEEEC
T ss_pred             ccChHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhhHHHHHHHHhccccccccc
Confidence            99999999989999999999999999999999999999999999999999999988776554333222211100000000


Q ss_pred             ccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCCCCCHHH
Q 025467          159 AASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTARE  238 (252)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~ta~e  238 (252)
                      ...       ........+... .......   ......   ...............+++.+||.+||++||++||||+|
T Consensus       304 ~~~-------~~~~~~~~~~~~-~l~~~~~---~~~~~~---~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~Rpta~e  369 (382)
T 2vx3_A          304 KTK-------DGKREYKPPGTR-KLHNILG---VETGGP---GGRRAGESGHTVADYLKFKDLILRMLDYDPKTRIQPYY  369 (382)
T ss_dssp             CCC-------TTCCCSCCTTCS-CHHHHHT---TTTTSG---GGTTTTCTTCCHHHHHHHHHHHHHHTCSCTTTSCCHHH
T ss_pred             ccc-------ccccccCCcchh-hHHHHhh---ccccCC---CccccccccccchhhHHHHHHHHHhcCCChhhCCCHHH
Confidence            000       000000000000 0000000   000000   00000000011123458999999999999999999999


Q ss_pred             HHcCCCCCCc
Q 025467          239 ALRHPFFTRD  248 (252)
Q Consensus       239 ~l~hpwf~~~  248 (252)
                      +|+||||+..
T Consensus       370 ~L~hp~f~~~  379 (382)
T 2vx3_A          370 ALQHSFFKKT  379 (382)
T ss_dssp             HTTSGGGCC-
T ss_pred             HhcCcccccC
Confidence            9999999875

>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*

Probab=100.00  E-value=1.1e-34  Score=245.73  Aligned_cols=211  Identities=28%  Similarity=0.480  Sum_probs=138.5

Q ss_pred             Chhhhhcc-CccccCCCCCCeEeecCCccccCCCc------cCCCCCC----------------CCccccCCCCCCceEE
Q 025467            1 MFAVMHDL-CMIHTDLKPENVLLVSSEYIKVPDYK------SSLHTPK----------------DSSYFKRMPKSSAIKV   57 (252)
Q Consensus         1 aL~~lH~~-~ivHrdlk~~Nil~~~~~~~~~~d~~------~~~~~~~----------------~~~~~~~~~~~~~~~l   57 (252)
                      ||+|||++ ||+||||||+|||++.++.....+++      .....+.                .............++|
T Consensus       158 aL~~lH~~~givHrDikp~NIll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl  237 (397)
T 1wak_A          158 GLDYLHTKCRIIHTDIKPENILLSVNEQYIRRLAAEATEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKI  237 (397)
T ss_dssp             HHHHHHHTTCEECCCCSGGGEEECCCHHHHHHHHHHHC---------------------CCTTSCCTTSGGGGGGCCEEE
T ss_pred             HHHHHHHhCCEecCCCCHHHeeEeccchhhhhhhhhhHHHhhcCCCCCCCCccccCCcccccccccccccccccccceEe
Confidence            68999998 99999999999999765421110000      0000000                0000000012347899


Q ss_pred             eecCCccccCCCCCccccCCCcccchhhhcCCCCccchhHhHHHHHHHHHhCCCCCCCCC------hHHHHHHHHHHhCC
Q 025467           58 IDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHE------NLEHLAMMERVLGP  131 (252)
Q Consensus        58 ~dfg~~~~~~~~~~~~~~t~~y~aPE~l~~~~~~~~~Diws~G~~l~~l~~g~~pf~~~~------~~~~~~~~~~~~g~  131 (252)
                      +|||.+...........||+.|+|||++.+..++.++||||+||++|+|++|..||.+.+      ..+.+..+....|.
T Consensus       238 ~DfG~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~  317 (397)
T 1wak_A          238 ADLGNACWVHKHFTEDIQTRQYRSLEVLIGSGYNTPADIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELLGK  317 (397)
T ss_dssp             CCGGGCEETTBCSCSCCSCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSCCCCCCSSSCHHHHHHHHHHHHHCS
T ss_pred             ccccccccccccCccCCCCCcccCChhhcCCCCCcHHHHHHHHHHHHHHhhCCCCCCCCcccccCchHHHHHHHHHhcCC
Confidence            999999876655555689999999999999899999999999999999999999997654      56778889999999


Q ss_pred             CchHHHHHhhHHHHHHhhcCCCCCCccccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhcc
Q 025467          132 LPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHV  211 (252)
Q Consensus       132 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  211 (252)
                      +|..++.........+...+............                                  ......+  .....
T Consensus       318 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------------------------~~~~~~~--~~~~~  361 (397)
T 1wak_A          318 VPRKLIVAGKYSKEFFTKKGDLKHITKLKPWG----------------------------------LFEVLVE--KYEWS  361 (397)
T ss_dssp             CCHHHHHHCTTGGGTBCTTSSBSSCCCCCCCC----------------------------------HHHHHHH--TSCCC
T ss_pred             CChHHhhcccccccccCCccccccccccCCcc----------------------------------hhHhhhh--hcccc
Confidence            99877644332222221111111000000000                                  0000000  01122


Q ss_pred             ccchhhHHHHHHHhccCCCCCCCCHHHHHcCCCCCC
Q 025467          212 DHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTR  247 (252)
Q Consensus       212 ~~~~~~~~~ll~~~L~~dP~~R~ta~e~l~hpwf~~  247 (252)
                      ...+..+.+||.+||++||++||||+|+|+||||++
T Consensus       362 ~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~~~~  397 (397)
T 1wak_A          362 QEEAAGFTDFLLPMLELIPEKRATAAECLRHPWLNS  397 (397)
T ss_dssp             HHHHHHHHHHHGGGGCSSGGGSCCHHHHHTSGGGGC
T ss_pred             hhhHHHHHHHHHHHhccChhhcCCHHHHhhCccccC
Confidence            345678999999999999999999999999999974

>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*

Probab=100.00  E-value=2.1e-34  Score=237.06  Aligned_cols=174  Identities=30%  Similarity=0.479  Sum_probs=125.9

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCC---CCccccCC
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD---QNYIVSTR   77 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~---~~~~~~t~   77 (252)
                      ||+|||++||+||||||+|||++.                           .+.++|+|||.+......   .....+|+
T Consensus       131 ~l~~LH~~~ivH~Dikp~NIl~~~---------------------------~~~~kl~Dfg~a~~~~~~~~~~~~~~~t~  183 (311)
T 3niz_A          131 GVAHCHQHRILHRDLKPQNLLINS---------------------------DGALKLADFGLARAFGIPVRSYTHEVVTL  183 (311)
T ss_dssp             HHHHHHHTTEECCCCCGGGEEECT---------------------------TCCEEECCCTTCEETTSCCC---CCCCCC
T ss_pred             HHHHHHHCCcccCCCchHhEEECC---------------------------CCCEEEccCcCceecCCCcccccCCcccC
Confidence            689999999999999999999944                           445778888877654322   22346899


Q ss_pred             Ccccchhhhc-CCCCccchhHhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHHHHHHhhcCCCCCC
Q 025467           78 HYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWP  156 (252)
Q Consensus        78 ~y~aPE~l~~-~~~~~~~Diws~G~~l~~l~~g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~  156 (252)
                      .|+|||++.+ ..++.++||||+||++|+|++|..||.+....+.+..+....+.++...+..........  .......
T Consensus       184 ~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~  261 (311)
T 3niz_A          184 WYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGTPNPREWPQVQELPLWK--QRTFQVF  261 (311)
T ss_dssp             TTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSTTTHHHHHHHHHCCCCTTTSGGGTTSHHHH--SCCCCCC
T ss_pred             CcCCHHHhcCCCCCCchHHhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHCCCChHHhhhhhccchhh--hcccccc
Confidence            9999999986 458999999999999999999999999988888888888888866543222111100000  0000000


Q ss_pred             ccccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCCCCCH
Q 025467          157 EGAASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTA  236 (252)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~ta  236 (252)
                      .                                              ...........++++.+||.+||++||++||||
T Consensus       262 ~----------------------------------------------~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~  295 (311)
T 3niz_A          262 E----------------------------------------------KKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISA  295 (311)
T ss_dssp             C----------------------------------------------CCCHHHHSTTCCHHHHHHHHHHSCSCTTTSCCH
T ss_pred             c----------------------------------------------CCcHHHhCcccCHHHHHHHHHHcCCChhHCCCH
Confidence            0                                              000011123456789999999999999999999


Q ss_pred             HHHHcCCCCCCcc
Q 025467          237 REALRHPFFTRDH  249 (252)
Q Consensus       237 ~e~l~hpwf~~~~  249 (252)
                      +|+|+||||++..
T Consensus       296 ~ell~hp~f~~~~  308 (311)
T 3niz_A          296 RDAMNHPYFKDLD  308 (311)
T ss_dssp             HHHHTSGGGTTSC
T ss_pred             HHHhcCcccccCC
Confidence            9999999999865

>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A

Probab=100.00  E-value=4.5e-34  Score=240.55  Aligned_cols=174  Identities=33%  Similarity=0.556  Sum_probs=130.0

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCCCccccCCCcc
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYR   80 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~~~~~~t~~y~   80 (252)
                      ||+|||++||+||||||+|||++                           ..+.++|+|||.+...........||+.|+
T Consensus       156 aL~~LH~~~ivH~Dikp~NIll~---------------------------~~~~~kL~Dfg~a~~~~~~~~~~~~t~~y~  208 (371)
T 4exu_A          156 GLKYIHSAGVVHRDLKPGNLAVN---------------------------EDCELKILDFGLARHADAEMTGYVVTRWYR  208 (371)
T ss_dssp             HHHHHHHTTCCCSCCCGGGEEEC---------------------------TTCCEEECSTTCC--------CTTCCCTTS
T ss_pred             HHHHHHHCCCcCCCcCHHHeEEC---------------------------CCCCEEEEecCcccccccCcCCcccCcccc
Confidence            68999999999999999999994                           444578888888776555445567899999


Q ss_pred             cchhhhc-CCCCccchhHhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHHHHHHhhcCCCCCCccc
Q 025467           81 APEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGA  159 (252)
Q Consensus        81 aPE~l~~-~~~~~~~Diws~G~~l~~l~~g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~  159 (252)
                      |||++.+ ..++.++||||+||++|+|++|..||.+.+..+.+..+....+.++.++...+...............+   
T Consensus       209 aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---  285 (371)
T 4exu_A          209 APEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQKLNDKAAKSYIQSLPQTP---  285 (371)
T ss_dssp             CHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCHHHHTTCSCHHHHHHHHHSCCCC---
T ss_pred             CHHHhcCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCcHHHHHHhhhhhhhhhhhccCCCc---
Confidence            9999987 578999999999999999999999999999999999999999999887765543322111111000000   


Q ss_pred             cchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCCCCCHHHH
Q 025467          160 ASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREA  239 (252)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~ta~e~  239 (252)
                                                                  ...........++++.+||.+||++||++|||++|+
T Consensus       286 --------------------------------------------~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~el  321 (371)
T 4exu_A          286 --------------------------------------------RKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQA  321 (371)
T ss_dssp             --------------------------------------------CCCHHHHSTTSCHHHHHHHHHHSCSCTTTSCCHHHH
T ss_pred             --------------------------------------------chhHHHhccccChHHHHHHHHHCCCChhhcCCHHHH
Confidence                                                        000011123456799999999999999999999999


Q ss_pred             HcCCCCCCc
Q 025467          240 LRHPFFTRD  248 (252)
Q Consensus       240 l~hpwf~~~  248 (252)
                      |+||||+..
T Consensus       322 l~hp~f~~~  330 (371)
T 4exu_A          322 LTHPFFEPF  330 (371)
T ss_dssp             HTSGGGTTT
T ss_pred             hcCcccccC
Confidence            999999864

>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*

Probab=100.00  E-value=6.7e-35  Score=242.74  Aligned_cols=139  Identities=24%  Similarity=0.343  Sum_probs=105.1

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCC-----Ccccc
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ-----NYIVS   75 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~-----~~~~~   75 (252)
                      ||+|||+++||||||||+|||++.++                           .+||+|||+|+......     ....|
T Consensus       197 gl~yLH~~~iiHRDLK~~NILl~~~~---------------------------~vKi~DFGlar~~~~~~~~~~~~~~~g  249 (353)
T 4ase_A          197 GMEFLASRKCIHRDLAARNILLSEKN---------------------------VVKICDFGLARDIYKDPDYVRKGDARL  249 (353)
T ss_dssp             HHHHHHHTTCCCSCCSGGGEEECGGG---------------------------CEEECCCGGGSCTTTCTTSEEETTEEE
T ss_pred             HHHhHhhCCeecCccCccceeeCCCC---------------------------CEEECcchhhhhcccCCCceeeccccc
Confidence            68999999999999999999996554                           45666666665432221     12368


Q ss_pred             CCCcccchhhhcCCCCccchhHhHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHHHHHHhhcCCCC
Q 025467           76 TRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLD  154 (252)
Q Consensus        76 t~~y~aPE~l~~~~~~~~~Diws~G~~l~~l~~-g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~  154 (252)
                      |+.|||||++.+..|+.++|||||||++|||+| |..||.+......+........                     ++.
T Consensus       250 t~~ymAPE~l~~~~y~~ksDVwS~Gv~l~El~t~G~~Pf~~~~~~~~~~~~i~~g~---------------------~~~  308 (353)
T 4ase_A          250 PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGT---------------------RMR  308 (353)
T ss_dssp             CGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHHHHHHHHHTC---------------------CCC
T ss_pred             cccccCHHHHhcCCCCCcccEeehHHHHHHHHhCCCCCCCCCCHHHHHHHHHHcCC---------------------CCC
Confidence            899999999999999999999999999999998 8999987654433332221110                     111


Q ss_pred             CCccccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCCCC
Q 025467          155 WPEGAASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRL  234 (252)
Q Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~  234 (252)
                      .|                                                       ...++++.+||.+||+.||++||
T Consensus       309 ~p-------------------------------------------------------~~~~~~~~~li~~c~~~dP~~RP  333 (353)
T 4ase_A          309 AP-------------------------------------------------------DYTTPEMYQTMLDCWHGEPSQRP  333 (353)
T ss_dssp             CC-------------------------------------------------------TTCCHHHHHHHHHHTCSSGGGSC
T ss_pred             CC-------------------------------------------------------ccCCHHHHHHHHHHcCcChhHCc
Confidence            11                                                       22456899999999999999999


Q ss_pred             CHHHHHcC
Q 025467          235 TAREALRH  242 (252)
Q Consensus       235 ta~e~l~h  242 (252)
                      |++|+++|
T Consensus       334 t~~eil~~  341 (353)
T 4ase_A          334 TFSELVEH  341 (353)
T ss_dssp             CHHHHHHH
T ss_pred             CHHHHHHH
Confidence            99999987

>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*

Probab=100.00  E-value=9.3e-34  Score=243.15  Aligned_cols=198  Identities=28%  Similarity=0.421  Sum_probs=124.0

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecC-CccccCCCCCccccCCCc
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG-STTYERPDQNYIVSTRHY   79 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg-~~~~~~~~~~~~~~t~~y   79 (252)
                      ||+|||++||+||||||+|||++.++.++++|||++..................   ..-+ ............+||+.|
T Consensus       141 aL~~LH~~givHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~gt~~Y  217 (432)
T 3n9x_A          141 GENFIHESGIIHRDLKPANCLLNQDCSVKVCDFGLARTINSEKDTNIVNDLEEN---EEPGPHNKNLKKQLTSHVVTRWY  217 (432)
T ss_dssp             HHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEEC----------------------------------CCCCCTT
T ss_pred             HHHHHHHCCCCCCCCCHHHeEECCCCCEEEccCCCccccccccccccccccccc---ccccccccchhccccCCCCCccc
Confidence            689999999999999999999977666666666655432211100000000000   0000 000000112335789999


Q ss_pred             ccchhhh-cCCCCccchhHhHHHHHHHHHh-----------CCCCCCCCC-----------------hHHHHHHHHHHhC
Q 025467           80 RAPEVIL-GLGWTYPCDIWSVGCILVELCT-----------GEALFQTHE-----------------NLEHLAMMERVLG  130 (252)
Q Consensus        80 ~aPE~l~-~~~~~~~~Diws~G~~l~~l~~-----------g~~pf~~~~-----------------~~~~~~~~~~~~g  130 (252)
                      +|||++. ...++.++||||+||++|+|++           |.++|.+.+                 ..+++..+..++|
T Consensus       218 ~APE~~~~~~~~~~~~DiwSlG~il~ell~g~~p~~~~~~~~~p~f~g~~~~~~~~~~~~~~~~~~~~~~ql~~i~~~~g  297 (432)
T 3n9x_A          218 RAPELILLQENYTKSIDIWSTGCIFAELLNMLQSHINDPTNRFPLFPGSSCFPLSPDRNSKKVHEKSNRDQLNIIFNIIG  297 (432)
T ss_dssp             CCHHHHTTCSCCCTHHHHHHHHHHHHHHHTTCTTTCSSGGGCCCSCCCSCSCC----------CHHHHHHHHHHHHHHHC
T ss_pred             cCHHHHhcCCCCCcccccchHHHHHHHHHhcccccccccccccccCCCccccccCcccccccccccchHHHHHHHHHhcC
Confidence            9999874 4568999999999999999997           455555443                 3578888999999


Q ss_pred             CCchHHHHHhhHH-HHHHhhcCCCCCCccccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhh
Q 025467          131 PLPQHMLKRVDRH-AEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQ  209 (252)
Q Consensus       131 ~~p~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  209 (252)
                      .++.+.+...... ...+........+.                                                ....
T Consensus       298 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~------------------------------------------------~~~~  329 (432)
T 3n9x_A          298 TPTEDDLKNINKPEVIKYIKLFPHRKPI------------------------------------------------NLKQ  329 (432)
T ss_dssp             SCCHHHHHTCCCHHHHHHHHTSCCCCCC------------------------------------------------CHHH
T ss_pred             CCCHHHHHhccCHHHHHHHHhCCCCCCC------------------------------------------------CHHH
Confidence            9998776554332 11111111100000                                                0011


Q ss_pred             ccccchhhHHHHHHHhccCCCCCCCCHHHHHcCCCCCCcc
Q 025467          210 HVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRDH  249 (252)
Q Consensus       210 ~~~~~~~~~~~ll~~~L~~dP~~R~ta~e~l~hpwf~~~~  249 (252)
                      .....++++.+||.+||++||++||||+|+|+||||+...
T Consensus       330 ~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~Hp~f~~~~  369 (432)
T 3n9x_A          330 KYPSISDDGINLLESMLKFNPNKRITIDQALDHPYLKDVR  369 (432)
T ss_dssp             HSTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTCGGGTTTC
T ss_pred             HCCCCCHHHHHHHHHHhcCCcccCCCHHHHhcChhhhhcc
Confidence            1234567999999999999999999999999999999764

>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*

Probab=100.00  E-value=6.1e-34  Score=236.15  Aligned_cols=207  Identities=46%  Similarity=0.817  Sum_probs=142.4

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCCCccccCCCcc
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYR   80 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~~~~~~t~~y~   80 (252)
                      ||+|||++||+||||||+|||++..+.....+.+..        ..........++|+|||.+...........||+.|+
T Consensus       130 ~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~~~~~~--------~~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~gt~~y~  201 (339)
T 1z57_A          130 SVNFLHSNKLTHTDLKPENILFVQSDYTEAYNPKIK--------RDERTLINPDIKVVDFGSATYDDEHHSTLVSTRHYR  201 (339)
T ss_dssp             HHHHHHHTTEECCCCCGGGEEESCCCEEEEEC------------CEEEEESCCCEEECCCSSCEETTSCCCSSCSCGGGC
T ss_pred             HHHHHHHCCCcCCCCCHHHEEEeccccccccCCccc--------cccccccCCCceEeeCcccccCccccccccCCcccc
Confidence            689999999999999999999965432111100000        000001245689999999987665555568899999


Q ss_pred             cchhhhcCCCCccchhHhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHHHHHHhhcCCCCCCcccc
Q 025467           81 APEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAA  160 (252)
Q Consensus        81 aPE~l~~~~~~~~~Diws~G~~l~~l~~g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (252)
                      |||++.+..++.++||||+||++|++++|..||.+.+..+....+....+++|..+........  +.......|.....
T Consensus       202 aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~--~~~~~~~~~~~~~~  279 (339)
T 1z57_A          202 APEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTHDSKEHLAMMERILGPLPKHMIQKTRKRK--YFHHDRLDWDEHSS  279 (339)
T ss_dssp             CHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSCHHHHHHHHHHHHCSCCHHHHHHCSCGG--GEETTEECCCTTSH
T ss_pred             ChHHhhCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhccchh--HHhhcccccccccc
Confidence            9999998899999999999999999999999999988888999999999999988766543211  11111122221110


Q ss_pred             chhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCCCCCHHHHH
Q 025467          161 SRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREAL  240 (252)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~ta~e~l  240 (252)
                      ..........  .                              -..........++++.+||.+||+.||.+|||++|++
T Consensus       280 ~~~~~~~~~~--~------------------------------~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell  327 (339)
T 1z57_A          280 AGRYVSRACK--P------------------------------LKEFMLSQDVEHERLFDLIQKMLEYDPAKRITLREAL  327 (339)
T ss_dssp             HHHHHHHHCC--C------------------------------GGGGCSCCSHHHHHHHHHHHHHTCSSTTTSCCHHHHT
T ss_pred             ccchhhhcCc--c------------------------------hhhhcccchhhHHHHHHHHHHHhCcCcccccCHHHHh
Confidence            0000000000  0                              0000111234567899999999999999999999999


Q ss_pred             cCCCCCCcc
Q 025467          241 RHPFFTRDH  249 (252)
Q Consensus       241 ~hpwf~~~~  249 (252)
                      +||||+...
T Consensus       328 ~hp~f~~~~  336 (339)
T 1z57_A          328 KHPFFDLLK  336 (339)
T ss_dssp             TSGGGGGGG
T ss_pred             cCHHHHHHh
Confidence            999998754

>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}

Probab=100.00  E-value=2.4e-34  Score=244.88  Aligned_cols=187  Identities=29%  Similarity=0.531  Sum_probs=124.4

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCC------CCccc
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD------QNYIV   74 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~------~~~~~   74 (252)
                      ||+|||++||+||||||+|||+...+                       ...+.++|+|||++......      ....+
T Consensus       140 al~~LH~~~ivH~Dlkp~NIll~~~~-----------------------~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~  196 (405)
T 3rgf_A          140 GIHYLHANWVLHRDLKPANILVMGEG-----------------------PERGRVKIADMGFARLFNSPLKPLADLDPVV  196 (405)
T ss_dssp             HHHHHHHTTCCCCCCCGGGEEECCSS-----------------------TTTTCEEECCTTCCC----------------
T ss_pred             HHHHHHhCCEeCCCcCHHHeEEecCC-----------------------CCCCcEEEEECCCceecCCCCcccccCCCce
Confidence            68999999999999999999995432                       23456788888888654321      12347


Q ss_pred             cCCCcccchhhhcC-CCCccchhHhHHHHHHHHHhCCCCCCCCCh---------HHHHHHHHHHhCCCchHHHHHhhHHH
Q 025467           75 STRHYRAPEVILGL-GWTYPCDIWSVGCILVELCTGEALFQTHEN---------LEHLAMMERVLGPLPQHMLKRVDRHA  144 (252)
Q Consensus        75 ~t~~y~aPE~l~~~-~~~~~~Diws~G~~l~~l~~g~~pf~~~~~---------~~~~~~~~~~~g~~p~~~~~~~~~~~  144 (252)
                      ||+.|+|||++.+. .++.++||||+||++|+|++|..||.+...         .+++..+...+|.++...+..+....
T Consensus       197 gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~~~~~~~l~~i~~~~g~p~~~~~~~~~~~~  276 (405)
T 3rgf_A          197 VTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFNVMGFPADKDWEDIKKMP  276 (405)
T ss_dssp             CCCTTCCHHHHTTCCSCCHHHHHHHHHHHHHHHHHSSCTTCCCC------CCCCHHHHHHHHHHHCCCCTTTCGGGGGST
T ss_pred             ecCcccCchhhcCCCcccchhhhHHHHHHHHHHHhCCCCCCCccccccccccchHHHHHHHHHhhCCCChhhcchhhcCc
Confidence            89999999999875 489999999999999999999999976544         47788888888877654332221110


Q ss_pred             HHHhhcCCCCCCccccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHH
Q 025467          145 EKYVRRGRLDWPEGAASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQG  224 (252)
Q Consensus       145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~  224 (252)
                      .....               ...... ...                  ..+      .............+..+.+||.+
T Consensus       277 ~~~~~---------------~~~~~~-~~~------------------~~~------~~~~~~~~~~~~~~~~~~~Ll~~  316 (405)
T 3rgf_A          277 EHSTL---------------MKDFRR-NTY------------------TNC------SLIKYMEKHKVKPDSKAFHLLQK  316 (405)
T ss_dssp             THHHH---------------HHHCCG-GGG------------------TTC------CHHHHHHTTTCCTTSHHHHHHHH
T ss_pred             chhhh---------------hhhccc-cCC------------------Ccc------hhhhhHhhcCCCCCHHHHHHHHH
Confidence            00000               000000 000                  000      00011112223446789999999


Q ss_pred             hccCCCCCCCCHHHHHcCCCCCCccc
Q 025467          225 LLRYDPTDRLTAREALRHPFFTRDHL  250 (252)
Q Consensus       225 ~L~~dP~~R~ta~e~l~hpwf~~~~~  250 (252)
                      ||++||.+||||+|+|+||||+..+.
T Consensus       317 ~L~~dP~~R~ta~e~L~hp~f~~~~~  342 (405)
T 3rgf_A          317 LLTMDPIKRITSEQAMQDPYFLEDPL  342 (405)
T ss_dssp             HSCSSGGGSCCHHHHHTSGGGTSSSC
T ss_pred             HccCCcccCCCHHHHhcChhhccCCC
Confidence            99999999999999999999988653

>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}

Probab=100.00  E-value=6.4e-34  Score=241.42  Aligned_cols=173  Identities=34%  Similarity=0.603  Sum_probs=131.5

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCC--CCccccCCC
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD--QNYIVSTRH   78 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~--~~~~~~t~~   78 (252)
                      ||+|||++||+||||||+|||++.                          ..+.+||+|||.++.....  .....+|+.
T Consensus       153 aL~~LH~~~ivHrDlkp~Nill~~--------------------------~~~~~kL~DFG~a~~~~~~~~~~~~~~t~~  206 (394)
T 4e7w_A          153 SLAYIHSIGICHRDIKPQNLLLDP--------------------------PSGVLKLIDFGSAKILIAGEPNVSYICSRY  206 (394)
T ss_dssp             HHHHHHHTTEECSCCSGGGEEEET--------------------------TTTEEEECCCTTCEECCTTCCCCSSCSCGG
T ss_pred             HHHHHHHCCccCCCCCHHHEEEcC--------------------------CCCcEEEeeCCCcccccCCCCCcccccCcC
Confidence            689999999999999999999952                          3446788888887654222  233578999


Q ss_pred             cccchhhhcC-CCCccchhHhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHHHHHHhhcCCCCCCc
Q 025467           79 YRAPEVILGL-GWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPE  157 (252)
Q Consensus        79 y~aPE~l~~~-~~~~~~Diws~G~~l~~l~~g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~  157 (252)
                      |+|||++.+. .++.++||||+||++|+|++|..||.+.+..+.+..+...+|.++.+.+..+....   .   ...++.
T Consensus       207 y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~p~~~~~~~~~~~~---~---~~~~~~  280 (394)
T 4e7w_A          207 YRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGESGIDQLVEIIKVLGTPSREQIKTMNPNY---M---EHKFPQ  280 (394)
T ss_dssp             GCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCGGG---S---SSCCCC
T ss_pred             ccCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhhChhh---h---hhcccc
Confidence            9999999775 48999999999999999999999999999999999999999998877655443211   0   000110


Q ss_pred             cccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCCCCCHH
Q 025467          158 GAASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAR  237 (252)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~ta~  237 (252)
                      ..  .                                         ...........++++.+||.+||++||.+|||+.
T Consensus       281 ~~--~-----------------------------------------~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~  317 (394)
T 4e7w_A          281 IR--P-----------------------------------------HPFSKVFRPRTPPDAIDLISRLLEYTPSARLTAI  317 (394)
T ss_dssp             CC--C-----------------------------------------CCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCCHH
T ss_pred             cc--C-----------------------------------------CcHHHhccccCCHHHHHHHHHHhCCChhhCCCHH
Confidence            00  0                                         0000111234567999999999999999999999


Q ss_pred             HHHcCCCCCCc
Q 025467          238 EALRHPFFTRD  248 (252)
Q Consensus       238 e~l~hpwf~~~  248 (252)
                      |+++||||+..
T Consensus       318 e~l~hp~f~~~  328 (394)
T 4e7w_A          318 EALCHPFFDEL  328 (394)
T ss_dssp             HHHTSGGGSTT
T ss_pred             HHhcChhhhhh
Confidence            99999999864

>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}

Probab=100.00  E-value=2.8e-34  Score=237.13  Aligned_cols=138  Identities=22%  Similarity=0.393  Sum_probs=103.0

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCC-----CCcccc
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD-----QNYIVS   75 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~-----~~~~~~   75 (252)
                      ||+|||+++||||||||+|||++.+                           ..+||+|||+++.....     ....+|
T Consensus       170 gl~yLH~~~iiHRDLKp~NILl~~~---------------------------~~~Ki~DFGla~~~~~~~~~~~~~~~~g  222 (329)
T 4aoj_A          170 GMVYLAGLHFVHRDLATRNCLVGQG---------------------------LVVKIGDFGMSRDIYSTDYYRVGGRTML  222 (329)
T ss_dssp             HHHHHHHTTCCCSCCCGGGEEEETT---------------------------TEEEECCCC----------------CCC
T ss_pred             HHHHHhcCCeecccccHhhEEECCC---------------------------CcEEEcccccceeccCCCcceecCcccc
Confidence            6899999999999999999999554                           45667777766543221     122468


Q ss_pred             CCCcccchhhhcCCCCccchhHhHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHHHHHHhhcCCCC
Q 025467           76 TRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLD  154 (252)
Q Consensus        76 t~~y~aPE~l~~~~~~~~~Diws~G~~l~~l~~-g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~  154 (252)
                      |+.|+|||++.+..|+.++|||||||++|||+| |+.||.+.+..+.+..+..  |.                    ++.
T Consensus       223 t~~ymAPE~~~~~~~~~~sDvwS~Gvvl~Ellt~G~~Pf~~~~~~~~~~~i~~--g~--------------------~~~  280 (329)
T 4aoj_A          223 PIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEAIDCITQ--GR--------------------ELE  280 (329)
T ss_dssp             CGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSSCHHHHHHHHHH--TC--------------------CCC
T ss_pred             cccccChhhhcCCCCCccccccchHHHHHHHHcCCCCCCCCCCHHHHHHHHHc--CC--------------------CCC
Confidence            999999999999999999999999999999998 8999988776655544322  10                    111


Q ss_pred             CCccccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCCCC
Q 025467          155 WPEGAASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRL  234 (252)
Q Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~  234 (252)
                      .|                                                       ...++++.+|+.+||+.||++||
T Consensus       281 ~p-------------------------------------------------------~~~~~~~~~li~~cl~~dP~~RP  305 (329)
T 4aoj_A          281 RP-------------------------------------------------------RACPPEVYAIMRGCWQREPQQRH  305 (329)
T ss_dssp             CC-------------------------------------------------------TTCCHHHHHHHHHHCCSSTTTSC
T ss_pred             Cc-------------------------------------------------------ccccHHHHHHHHHHcCcChhHCc
Confidence            11                                                       22456899999999999999999


Q ss_pred             CHHHHHcC
Q 025467          235 TAREALRH  242 (252)
Q Consensus       235 ta~e~l~h  242 (252)
                      |++|++++
T Consensus       306 s~~ei~~~  313 (329)
T 4aoj_A          306 SIKDVHAR  313 (329)
T ss_dssp             CHHHHHHH
T ss_pred             CHHHHHHH
Confidence            99999764

>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A

Probab=100.00  E-value=1.4e-34  Score=236.82  Aligned_cols=138  Identities=21%  Similarity=0.271  Sum_probs=107.2

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCC-----CCCcccc
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERP-----DQNYIVS   75 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~-----~~~~~~~   75 (252)
                      ||+|||+++||||||||+|||++.+                           +.+||+|||+++....     .....+|
T Consensus       157 gl~yLH~~~iiHRDLK~~NILl~~~---------------------------~~~Ki~DFGlar~~~~~~~~~~~~~~~g  209 (308)
T 4gt4_A          157 GMEYLSSHHVVHKDLATRNVLVYDK---------------------------LNVKISDLGLFREVYAADYYKLLGNSLL  209 (308)
T ss_dssp             HHHHHHHTTCCCSCCSGGGEEECGG---------------------------GCEEECCSCCBCGGGGGGCBCSSSSSCB
T ss_pred             HHHHHHhCCCCCCCccccceEECCC---------------------------CCEEECCcccceeccCCCceeEeccccc
Confidence            6899999999999999999999544                           4567777777654321     1223478


Q ss_pred             CCCcccchhhhcCCCCccchhHhHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHHHHHHhhcCCCC
Q 025467           76 TRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLD  154 (252)
Q Consensus        76 t~~y~aPE~l~~~~~~~~~Diws~G~~l~~l~~-g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~  154 (252)
                      |+.|+|||++.+..|+.++|||||||++|||+| |..||.+.+..+.+..+..  |.                    .+.
T Consensus       210 t~~ymAPE~l~~~~~s~ksDVwSfGvvl~El~t~g~~Pf~~~~~~~~~~~i~~--~~--------------------~~~  267 (308)
T 4gt4_A          210 PIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDVVEMIRN--RQ--------------------VLP  267 (308)
T ss_dssp             CGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTCCHHHHHHHHHT--TC--------------------CCC
T ss_pred             CCcccCHHHHhCCCCCccchhhhHHHHHHHHHhCCCCCCCCCCHHHHHHHHHc--CC--------------------CCC
Confidence            999999999999999999999999999999998 8999988776555443321  10                    011


Q ss_pred             CCccccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCCCC
Q 025467          155 WPEGAASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRL  234 (252)
Q Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~  234 (252)
                      .|                                                       ...+.++.+|+.+||+.||++||
T Consensus       268 ~p-------------------------------------------------------~~~~~~~~~li~~C~~~dP~~RP  292 (308)
T 4gt4_A          268 CP-------------------------------------------------------DDCPAWVYALMIECWNEFPSRRP  292 (308)
T ss_dssp             CC-------------------------------------------------------TTCCHHHHHHHHHHTCSSGGGSC
T ss_pred             Cc-------------------------------------------------------ccchHHHHHHHHHHcCCChhHCc
Confidence            11                                                       23456899999999999999999


Q ss_pred             CHHHHHcC
Q 025467          235 TAREALRH  242 (252)
Q Consensus       235 ta~e~l~h  242 (252)
                      |++|++++
T Consensus       293 s~~ei~~~  300 (308)
T 4gt4_A          293 RFKDIHSR  300 (308)
T ss_dssp             CHHHHHHH
T ss_pred             CHHHHHHH
Confidence            99999875

>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*

Probab=100.00  E-value=5.2e-34  Score=235.24  Aligned_cols=177  Identities=31%  Similarity=0.514  Sum_probs=127.5

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCC---CCccccCC
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD---QNYIVSTR   77 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~---~~~~~~t~   77 (252)
                      ||+|||++||+||||||+|||++.                           .+.++|+|||.+......   .....||+
T Consensus       120 aL~~lH~~~ivH~Dlkp~NIl~~~---------------------------~~~~kl~Dfg~~~~~~~~~~~~~~~~~t~  172 (317)
T 2pmi_A          120 GLAFCHENKILHRDLKPQNLLINK---------------------------RGQLKLGDFGLARAFGIPVNTFSSEVVTL  172 (317)
T ss_dssp             HHHHHHHTTEECCCCCGGGEEECT---------------------------TCCEEECCCSSCEETTSCCCCCCCCCSCC
T ss_pred             HHHHHHHCCeeeCCCChHHeEEcC---------------------------CCCEEECcCccceecCCCcccCCCCcccc
Confidence            689999999999999999999944                           445777777777643321   22347899


Q ss_pred             CcccchhhhcC-CCCccchhHhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHHHHHHhhcCCCCCC
Q 025467           78 HYRAPEVILGL-GWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWP  156 (252)
Q Consensus        78 ~y~aPE~l~~~-~~~~~~Diws~G~~l~~l~~g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~  156 (252)
                      .|+|||++.+. .++.++||||+||++|+|++|..||.+.+..+.+..+....|.+++..+..........     ....
T Consensus       173 ~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~-----~~~~  247 (317)
T 2pmi_A          173 WYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEEQLKLIFDIMGTPNESLWPSVTKLPKYN-----PNIQ  247 (317)
T ss_dssp             TTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCTTTCGGGGGCTTCC-----TTCC
T ss_pred             cccCchHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChhHhhhhhhhhhcc-----cccc
Confidence            99999999864 58999999999999999999999999998888888888888877654432221100000     0000


Q ss_pred             ccccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCCCCCH
Q 025467          157 EGAASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTA  236 (252)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~ta  236 (252)
                      ..                                    .   .....+..........+.++.+||.+||+.||++|||+
T Consensus       248 ~~------------------------------------~---~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~  288 (317)
T 2pmi_A          248 QR------------------------------------P---PRDLRQVLQPHTKEPLDGNLMDFLHGLLQLNPDMRLSA  288 (317)
T ss_dssp             CC------------------------------------C---CCCSHHHHGGGCSSCCCHHHHHHHHHHSCSSGGGSCCH
T ss_pred             cc------------------------------------c---chhHHHhhcccccccCCHHHHHHHHHHCCCCcccCCCH
Confidence            00                                    0   00000111112234567799999999999999999999


Q ss_pred             HHHHcCCCCCCc
Q 025467          237 REALRHPFFTRD  248 (252)
Q Consensus       237 ~e~l~hpwf~~~  248 (252)
                      +|+|+||||++.
T Consensus       289 ~e~l~hp~f~~~  300 (317)
T 2pmi_A          289 KQALHHPWFAEY  300 (317)
T ss_dssp             HHHTTSGGGGGG
T ss_pred             HHHhCChhhhcc
Confidence            999999999864

>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*

Probab=100.00  E-value=1.8e-34  Score=235.29  Aligned_cols=98  Identities=23%  Similarity=0.366  Sum_probs=79.9

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCC-----Ccccc
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ-----NYIVS   75 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~-----~~~~~   75 (252)
                      ||+|||+++||||||||+|||++.                           +..+||+|||+|+......     ....|
T Consensus       140 gl~yLH~~~iiHRDlKp~NILl~~---------------------------~~~~Ki~DFGla~~~~~~~~~~~~~~~~g  192 (299)
T 4asz_A          140 GMVYLASQHFVHRDLATRNCLVGE---------------------------NLLVKIGDFGMSRDVYSTDYYRVGGHTML  192 (299)
T ss_dssp             HHHHHHHTTCCCSCCSGGGEEECG---------------------------GGCEEECCCSCHHHHTGGGCEEETTTEEE
T ss_pred             HHHHHHhCCcccCccCHhhEEECC---------------------------CCcEEECCcccceecCCCCceeecCceec
Confidence            689999999999999999999954                           4457777888776432221     22368


Q ss_pred             CCCcccchhhhcCCCCccchhHhHHHHHHHHHh-CCCCCCCCChHHHHHHH
Q 025467           76 TRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHENLEHLAMM  125 (252)
Q Consensus        76 t~~y~aPE~l~~~~~~~~~Diws~G~~l~~l~~-g~~pf~~~~~~~~~~~~  125 (252)
                      |+.|+|||++.+..|+.++|||||||++|||+| |+.||.+.+..+.+..+
T Consensus       193 t~~ymAPE~~~~~~~~~k~DVwS~Gvvl~Ellt~G~~Pf~~~~~~~~~~~i  243 (299)
T 4asz_A          193 PIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNEVIECI  243 (299)
T ss_dssp             CGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHH
T ss_pred             ChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHH
Confidence            999999999999999999999999999999998 89999887766555443

>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A

Probab=100.00  E-value=9.3e-34  Score=238.38  Aligned_cols=191  Identities=30%  Similarity=0.517  Sum_probs=135.3

Q ss_pred             Chhhhhcc-CccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCCCccccCCCc
Q 025467            1 MFAVMHDL-CMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHY   79 (252)
Q Consensus         1 aL~~lH~~-~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~~~~~~t~~y   79 (252)
                      ||+|||++ ||+||||||+|||++..+..                     .....++|+|||.+...........||+.|
T Consensus       143 aL~~lH~~~~ivH~Dikp~NIll~~~~~~---------------------~~~~~~kl~Dfg~a~~~~~~~~~~~~t~~y  201 (373)
T 1q8y_A          143 GLDYMHRRCGIIHTDIKPENVLMEIVDSP---------------------ENLIQIKIADLGNACWYDEHYTNSIQTREY  201 (373)
T ss_dssp             HHHHHHHTTCEECSCCSGGGEEEEEEETT---------------------TTEEEEEECCCTTCEETTBCCCSCCSCGGG
T ss_pred             HHHHHHhcCCEEecCCChHHeEEeccCCC---------------------cCcceEEEcccccccccCCCCCCCCCCccc
Confidence            68999998 99999999999999643210                     123367899999987665555556889999


Q ss_pred             ccchhhhcCCCCccchhHhHHHHHHHHHhCCCCCCCCC------hHHHHHHHHHHhCCCchHHHHHhhHHHHHHhhcCCC
Q 025467           80 RAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHE------NLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRL  153 (252)
Q Consensus        80 ~aPE~l~~~~~~~~~Diws~G~~l~~l~~g~~pf~~~~------~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~  153 (252)
                      +|||++.+..++.++||||+||++|+|++|..||.+.+      +...+..+....|.+|..++.........+...+..
T Consensus       202 ~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~  281 (373)
T 1q8y_A          202 RSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIAQIIELLGELPSYLLRNGKYTRTFFNSRGLL  281 (373)
T ss_dssp             CCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC---------CHHHHHHHHHHHHCSCCHHHHHHCTTHHHHBCC--CB
T ss_pred             cCcHHHhCCCCCchHhHHHHHHHHHHHHhCCCCCCCCcccccCChHHHHHHHHHhcCCCCHHHHhccchhhhhcCCcchh
Confidence            99999999899999999999999999999999997654      567788899999999988766554333322222211


Q ss_pred             CCCccccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCCC
Q 025467          154 DWPEGAASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDR  233 (252)
Q Consensus       154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R  233 (252)
                      ........ ..+...                                   -..........+.++.+||.+||+.||++|
T Consensus       282 ~~~~~~~~-~~~~~~-----------------------------------~~~~~~~~~~~~~~~~~li~~~L~~dP~~R  325 (373)
T 1q8y_A          282 RNISKLKF-WPLEDV-----------------------------------LTEKYKFSKDEAKEISDFLSPMLQLDPRKR  325 (373)
T ss_dssp             SSCCCCCB-CCHHHH-----------------------------------HHHTTCCCHHHHHHHHHHHGGGGCSSTTTC
T ss_pred             cccccccc-cchhhh-----------------------------------hhhcccCCcchHHHHHHHHHHHhccCcccc
Confidence            11000000 000000                                   000011223456789999999999999999


Q ss_pred             CCHHHHHcCCCCCCc
Q 025467          234 LTAREALRHPFFTRD  248 (252)
Q Consensus       234 ~ta~e~l~hpwf~~~  248 (252)
                      ||++|+|+||||+..
T Consensus       326 pt~~ell~hp~f~~~  340 (373)
T 1q8y_A          326 ADAGGLVNHPWLKDT  340 (373)
T ss_dssp             BCHHHHHTCGGGTTC
T ss_pred             CCHHHHhhChhhhcc
Confidence            999999999999975

>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}

Probab=100.00  E-value=1.7e-33  Score=235.73  Aligned_cols=177  Identities=33%  Similarity=0.564  Sum_probs=132.2

Q ss_pred             Chhhhh--ccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCC--CccccC
Q 025467            1 MFAVMH--DLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ--NYIVST   76 (252)
Q Consensus         1 aL~~lH--~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~--~~~~~t   76 (252)
                      ||.|||  ++||+||||||+|||++.                          ..+.++|+|||.+.......  ....||
T Consensus       141 al~~lH~~~~~ivH~Dlkp~NIll~~--------------------------~~~~~kl~Dfg~a~~~~~~~~~~~~~gt  194 (360)
T 3e3p_A          141 SIGCLHLPSVNVCHRDIKPHNVLVNE--------------------------ADGTLKLCDFGSAKKLSPSEPNVAYICS  194 (360)
T ss_dssp             HHHHHTSTTTCCBCSCCCGGGEEEET--------------------------TTTEEEECCCTTCBCCCTTSCCCSTTSC
T ss_pred             HHHHHhCCCCCeecCcCCHHHEEEeC--------------------------CCCcEEEeeCCCceecCCCCCcccccCC
Confidence            578999  999999999999999953                          13457788888776543322  234689


Q ss_pred             CCcccchhhhcCC-CCccchhHhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHHHHHHhhcCCCCC
Q 025467           77 RHYRAPEVILGLG-WTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDW  155 (252)
Q Consensus        77 ~~y~aPE~l~~~~-~~~~~Diws~G~~l~~l~~g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~  155 (252)
                      +.|+|||++.+.. ++.++||||+||++|+|++|..||.+.+....+..+.+..+.++.+++..+.............. 
T Consensus       195 ~~y~aPE~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-  273 (360)
T 3e3p_A          195 RYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSAGQLHEIVRVLGCPSREVLRKLNPSHTDVDLYNSKG-  273 (360)
T ss_dssp             GGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCTTCCCGGGGCCCC-
T ss_pred             cceeCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCcCCCChHHHHHHHHHHcCCCCHHHHHhcccchhhcccccccc-
Confidence            9999999997654 89999999999999999999999999999999999999999998877655432110000000000 


Q ss_pred             CccccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCCCCC
Q 025467          156 PEGAASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLT  235 (252)
Q Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~t  235 (252)
                             .                                      .............+.++.+||.+||++||.+|||
T Consensus       274 -------~--------------------------------------~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt  308 (360)
T 3e3p_A          274 -------I--------------------------------------PWSNVFSDHSLKDAKEAYDLLSALLQYLPEERMK  308 (360)
T ss_dssp             -------C--------------------------------------CHHHHTTTCCCTTHHHHHHHHHHHTCSSGGGSCC
T ss_pred             -------C--------------------------------------CcccccchhhccccHHHHHHHHHHhccCccccCC
Confidence                   0                                      0011112223345679999999999999999999


Q ss_pred             HHHHHcCCCCCCcc
Q 025467          236 AREALRHPFFTRDH  249 (252)
Q Consensus       236 a~e~l~hpwf~~~~  249 (252)
                      +.|+|+||||++..
T Consensus       309 ~~e~l~hp~f~~~~  322 (360)
T 3e3p_A          309 PYEALCHPYFDELH  322 (360)
T ss_dssp             HHHHTTSGGGGGGG
T ss_pred             HHHHhcCccccccC
Confidence            99999999998754

>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...

Probab=100.00  E-value=2.3e-33  Score=239.83  Aligned_cols=173  Identities=30%  Similarity=0.547  Sum_probs=129.4

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCC--CCccccCCC
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD--QNYIVSTRH   78 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~--~~~~~~t~~   78 (252)
                      ||+|||++||+||||||+|||++.+                          ...+||+|||+++.....  ....+||+.
T Consensus       168 aL~~LH~~~ivHrDlkp~NILl~~~--------------------------~~~~kl~DFG~a~~~~~~~~~~~~~~t~~  221 (420)
T 1j1b_A          168 SLAYIHSFGICHRDIKPQNLLLDPD--------------------------TAVLKLCDFGSAKQLVRGEPNVSYICSRY  221 (420)
T ss_dssp             HHHHHHTTTEECSCCSGGGEEEETT--------------------------TTEEEECCCTTCEECCTTCCCCSCCSCTT
T ss_pred             HHHHHHHCCccccCCChhhEEEeCC--------------------------CCeEEeccchhhhhcccCCCceeeeeCCC
Confidence            6899999999999999999999532                          234688888888653322  223578999


Q ss_pred             cccchhhhcC-CCCccchhHhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHHHHHHhhcCCCCCCc
Q 025467           79 YRAPEVILGL-GWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPE  157 (252)
Q Consensus        79 y~aPE~l~~~-~~~~~~Diws~G~~l~~l~~g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~  157 (252)
                      |+|||++.+. .++.++||||+||++|+|++|+.||.+.+..+.+..+...+|.++.+.+..+...      -..+.++.
T Consensus       222 y~aPE~~~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~~~l~~i~~~lg~p~~~~~~~~~~~------~~~~~~p~  295 (420)
T 1j1b_A          222 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPN------YTEFKFPQ  295 (420)
T ss_dssp             SCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCSCCHHHHHHHCSC------CCCCCCCC
T ss_pred             cCCHHHHcCCCCCCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhhChh------hhhhccCc
Confidence            9999999875 6899999999999999999999999999989999999999998876654432210      00011110


Q ss_pred             cccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCCCCCHH
Q 025467          158 GAASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAR  237 (252)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~ta~  237 (252)
                      ..  ...+                                         ........+.++.+||.+||++||.+|||+.
T Consensus       296 ~~--~~~~-----------------------------------------~~~~~~~~~~~~~~Li~~~L~~dP~~R~t~~  332 (420)
T 1j1b_A          296 IK--AHPW-----------------------------------------TKVFRPRTPPEAIALCSRLLEYTPTARLTPL  332 (420)
T ss_dssp             CC--CCCH-----------------------------------------HHHSCTTSCHHHHHHHHHHSCSSGGGSCCHH
T ss_pred             cC--CCCH-----------------------------------------HHhcCCCCCHHHHHHHHHhccCChhHCCCHH
Confidence            00  0000                                         0011133567899999999999999999999


Q ss_pred             HHHcCCCCCCc
Q 025467          238 EALRHPFFTRD  248 (252)
Q Consensus       238 e~l~hpwf~~~  248 (252)
                      |+++||||+..
T Consensus       333 e~l~hp~f~~~  343 (420)
T 1j1b_A          333 EACAHSFFDEL  343 (420)
T ss_dssp             HHHTSGGGGGG
T ss_pred             HHhCCHhhccc
Confidence            99999999754

>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}

Probab=100.00  E-value=7.9e-34  Score=234.85  Aligned_cols=174  Identities=29%  Similarity=0.546  Sum_probs=123.8

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCC---CccccCC
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ---NYIVSTR   77 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~---~~~~~t~   77 (252)
                      ||+|||++||+||||||+|||++.                           .+.++|+|||.+.......   ....||+
T Consensus       112 aL~~LH~~~ivH~Dikp~NIl~~~---------------------------~~~~kl~Dfg~a~~~~~~~~~~~~~~~t~  164 (324)
T 3mtl_A          112 GLAYCHRQKVLHRDLKPQNLLINE---------------------------RGELKLADFGLARAKSIPTKTYDNEVVTL  164 (324)
T ss_dssp             HHHHHHHTTEEESSCCGGGEEECT---------------------------TCCEEECSSSEEECC------------CG
T ss_pred             HHHHHHHCCccCCCcCHHHEEECC---------------------------CCCEEEccCcccccccCCccccccccCcc
Confidence            689999999999999999999954                           3456777777665433221   2236789


Q ss_pred             Ccccchhhhc-CCCCccchhHhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHHHHHHhhcCCCCCC
Q 025467           78 HYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWP  156 (252)
Q Consensus        78 ~y~aPE~l~~-~~~~~~~Diws~G~~l~~l~~g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~  156 (252)
                      .|+|||++.+ ..++.++||||+||++|+|++|..||.+.+..+.+..+....+.++...+...........    ..++
T Consensus       165 ~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~----~~~~  240 (324)
T 3mtl_A          165 WYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTVEEQLHFIFRILGTPTEETWPGILSNEEFKT----YNYP  240 (324)
T ss_dssp             GGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGCHHHHH----TCCC
T ss_pred             cccChhhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHhchhhhcchhhcc----cccc
Confidence            9999999987 4689999999999999999999999999998899999999988776543222111000000    0000


Q ss_pred             ccccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCCCCCH
Q 025467          157 EGAASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTA  236 (252)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~ta  236 (252)
                      .                .                            ............+.++.+||.+||++||.+|||+
T Consensus       241 ~----------------~----------------------------~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~  276 (324)
T 3mtl_A          241 K----------------Y----------------------------RAEALLSHAPRLDSDGADLLTKLLQFEGRNRISA  276 (324)
T ss_dssp             C----------------C----------------------------CCCCHHHHCTTSCHHHHHHHHHHSCSSGGGSCCH
T ss_pred             c----------------c----------------------------cchhhhhhcCCCCHHHHHHHHHHcCcCcccCCCH
Confidence            0                0                            0000112234567789999999999999999999


Q ss_pred             HHHHcCCCCCCcc
Q 025467          237 REALRHPFFTRDH  249 (252)
Q Consensus       237 ~e~l~hpwf~~~~  249 (252)
                      +|+|+||||....
T Consensus       277 ~e~l~hp~f~~~~  289 (324)
T 3mtl_A          277 EDAMKHPFFLSLG  289 (324)
T ss_dssp             HHHTTSGGGGGGC
T ss_pred             HHHhcChhhhhcc
Confidence            9999999998764

>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}

Probab=100.00  E-value=2.9e-33  Score=234.05  Aligned_cols=174  Identities=33%  Similarity=0.561  Sum_probs=128.9

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCCCccccCCCcc
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYR   80 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~~~~~~t~~y~   80 (252)
                      ||+|||++||+||||||+||+++.                           .+.++|+|||.+...........+|+.|+
T Consensus       138 al~~LH~~~ivH~dlkp~NIl~~~---------------------------~~~~kl~Dfg~~~~~~~~~~~~~~t~~y~  190 (353)
T 3coi_A          138 GLKYIHSAGVVHRDLKPGNLAVNE---------------------------DCELKILDFGLARHADAEMTGYVVTRWYR  190 (353)
T ss_dssp             HHHHHHHTTCCCSSCCGGGEEECT---------------------------TCCEEECSTTCTTC--------CCSBCCS
T ss_pred             HHHHHHHCCcccCCCCHHHEeECC---------------------------CCcEEEeecccccCCCCCccccccCcCcC
Confidence            689999999999999999999944                           44577778877765444444457899999


Q ss_pred             cchhhhc-CCCCccchhHhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHHHHHHhhcCCCCCCccc
Q 025467           81 APEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGA  159 (252)
Q Consensus        81 aPE~l~~-~~~~~~~Diws~G~~l~~l~~g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~  159 (252)
                      |||++.+ ..++.++||||+||++|+|++|..||.+.+..+.+..+....|.++.++...+...............+   
T Consensus       191 aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---  267 (353)
T 3coi_A          191 APEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQKLNDKAAKSYIQSLPQTP---  267 (353)
T ss_dssp             CHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSSBSSCHHHHHHHHHHHHCBCCHHHHTTCSCHHHHHHHHTSCBCS---
T ss_pred             CHHHHhCcCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHHHhhHHHHHHHHhCcCCC---
Confidence            9999987 578899999999999999999999999988888999999999998887765543322111111000000   


Q ss_pred             cchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCCCCCHHHH
Q 025467          160 ASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREA  239 (252)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~ta~e~  239 (252)
                                   .                               ..........+.++.+||.+||+.||++|||++++
T Consensus       268 -------------~-------------------------------~~~~~~~~~~~~~~~~li~~~L~~dp~~Rpt~~e~  303 (353)
T 3coi_A          268 -------------R-------------------------------KDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQA  303 (353)
T ss_dssp             -------------S-------------------------------CCTTTTCTTSCHHHHHHHHHHSCSCTTTSCCHHHH
T ss_pred             -------------C-------------------------------ccHHHhcCCcCHHHHHHHHHHcCCCcccCCCHHHH
Confidence                         0                               00001123456799999999999999999999999


Q ss_pred             HcCCCCCCc
Q 025467          240 LRHPFFTRD  248 (252)
Q Consensus       240 l~hpwf~~~  248 (252)
                      |+||||+..
T Consensus       304 l~hp~f~~~  312 (353)
T 3coi_A          304 LTHPFFEPF  312 (353)
T ss_dssp             HTSGGGTTT
T ss_pred             hcCcchhhc
Confidence            999999864

>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*

Probab=100.00  E-value=3.3e-33  Score=234.27  Aligned_cols=151  Identities=29%  Similarity=0.410  Sum_probs=118.6

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCC--CCccccCCC
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD--QNYIVSTRH   78 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~--~~~~~~t~~   78 (252)
                      ||+|||++||+||||||+|||+...+                       .....++|+|||++......  ....+||+.
T Consensus       127 aL~~LH~~givHrDlkp~NIll~~~~-----------------------~~~~~vkl~DFG~a~~~~~~~~~~~~~gt~~  183 (361)
T 2yab_A          127 GVNYLHTKKIAHFDLKPENIMLLDKN-----------------------IPIPHIKLIDFGLAHEIEDGVEFKNIFGTPE  183 (361)
T ss_dssp             HHHHHHHTTEECCCCSGGGEEESCTT-----------------------SSSCCEEECCCSSCEECCTTCCCCCCCSCGG
T ss_pred             HHHHHHHCCcccCCCCHHHEEEeCCC-----------------------CCccCEEEEecCCceEcCCCCccccCCCCcc
Confidence            68999999999999999999995433                       11225788999988754432  233579999


Q ss_pred             cccchhhhcCCCCccchhHhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHHHHHHhhcCCCCCCcc
Q 025467           79 YRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEG  158 (252)
Q Consensus        79 y~aPE~l~~~~~~~~~Diws~G~~l~~l~~g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~  158 (252)
                      |+|||++.+..++.++||||+||++|+|++|..||.+.+..+.+..+.......+..                       
T Consensus       184 y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~Pf~~~~~~~~~~~i~~~~~~~~~~-----------------------  240 (361)
T 2yab_A          184 FVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITAVSYDFDEE-----------------------  240 (361)
T ss_dssp             GCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHTTCCCCCHH-----------------------
T ss_pred             EECchHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCCCch-----------------------
Confidence            999999998899999999999999999999999998877665555443322222111                       


Q ss_pred             ccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCCCCCHHH
Q 025467          159 AASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTARE  238 (252)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~ta~e  238 (252)
                                                                         .+...+.++.+||.+||+.||.+|||+.|
T Consensus       241 ---------------------------------------------------~~~~~s~~~~~li~~~L~~dP~~R~t~~e  269 (361)
T 2yab_A          241 ---------------------------------------------------FFSQTSELAKDFIRKLLVKETRKRLTIQE  269 (361)
T ss_dssp             ---------------------------------------------------HHTTSCHHHHHHHHHHSCSSTTTSCCHHH
T ss_pred             ---------------------------------------------------hccCCCHHHHHHHHHHCCCChhHCcCHHH
Confidence                                                               11334568999999999999999999999


Q ss_pred             HHcCCCCCCc
Q 025467          239 ALRHPFFTRD  248 (252)
Q Consensus       239 ~l~hpwf~~~  248 (252)
                      +|+||||+..
T Consensus       270 ~l~hp~~~~~  279 (361)
T 2yab_A          270 ALRHPWITPV  279 (361)
T ss_dssp             HHTSTTTSCS
T ss_pred             HhcCcCcCCC
Confidence            9999999854

>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A

Probab=100.00  E-value=9.4e-34  Score=230.96  Aligned_cols=172  Identities=28%  Similarity=0.504  Sum_probs=123.2

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCC---CCccccCC
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD---QNYIVSTR   77 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~---~~~~~~t~   77 (252)
                      ||+|||++||+||||||+|||++.                           ++.++|+|||.+......   .....||+
T Consensus       113 ~l~~lH~~~ivH~dikp~Nil~~~---------------------------~~~~kl~Dfg~~~~~~~~~~~~~~~~~t~  165 (292)
T 3o0g_A          113 GLGFCHSRNVLHRDLKPQNLLINR---------------------------NGELKLANFGLARAFGIPVRCYSAEVVTL  165 (292)
T ss_dssp             HHHHHHHTTEECCCCSGGGEEECT---------------------------TSCEEECCCTTCEECCSCCSCCCSCCSCG
T ss_pred             HHHHHHhCCeecCCCCHHHEEEcC---------------------------CCCEEEeecccceecCCccccccCCcccc
Confidence            689999999999999999999944                           445777888877644322   22346789


Q ss_pred             CcccchhhhcCC-CCccchhHhHHHHHHHHHhCCCC-CCCCChHHHHHHHHHHhCCCchHHHHHhhHHHHHHhhcCCCCC
Q 025467           78 HYRAPEVILGLG-WTYPCDIWSVGCILVELCTGEAL-FQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDW  155 (252)
Q Consensus        78 ~y~aPE~l~~~~-~~~~~Diws~G~~l~~l~~g~~p-f~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~  155 (252)
                      .|+|||++.+.. ++.++||||+||++|+|++|..| |.+.+..+.+..+....+.++...+..+.....      ....
T Consensus       166 ~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~~~~p~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~------~~~~  239 (292)
T 3o0g_A          166 WYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPD------YKPY  239 (292)
T ss_dssp             GGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSSHHHHHHHHHHHHCCCCTTTCTTGGGSTT------CCCC
T ss_pred             CCcChHHHcCCCCcCchHHHHHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHHhCCCChhhhhhhccccc------cccc
Confidence            999999998765 79999999999999999987766 666677778888888888766433222111000      0000


Q ss_pred             CccccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCCCCC
Q 025467          156 PEGAASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLT  235 (252)
Q Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~t  235 (252)
                      +                ..  +                         ............+.++.+||.+||++||++|||
T Consensus       240 ~----------------~~--~-------------------------~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t  276 (292)
T 3o0g_A          240 P----------------MY--P-------------------------ATTSLVNVVPKLNATGRDLLQNLLKCNPVQRIS  276 (292)
T ss_dssp             C----------------CC--C-------------------------TTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCC
T ss_pred             c----------------cc--c-------------------------CCcchhhcccccChHHHHHHHHHhccChhhCCC
Confidence            0                00  0                         000001112346678999999999999999999


Q ss_pred             HHHHHcCCCCCCc
Q 025467          236 AREALRHPFFTRD  248 (252)
Q Consensus       236 a~e~l~hpwf~~~  248 (252)
                      |+|+|+||||++.
T Consensus       277 ~~e~l~hp~f~~~  289 (292)
T 3o0g_A          277 AEEALQHPYFSDF  289 (292)
T ss_dssp             HHHHHTSGGGTTC
T ss_pred             HHHHhcCcccccC
Confidence            9999999999874

>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A

Probab=100.00  E-value=9.7e-34  Score=230.49  Aligned_cols=172  Identities=31%  Similarity=0.533  Sum_probs=121.0

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCC---CCccccCC
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD---QNYIVSTR   77 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~---~~~~~~t~   77 (252)
                      ||+|||++||+||||||+||+++.                           .+.++|+|||.+......   .....+|+
T Consensus       112 ~l~~lH~~~i~H~dlkp~Nil~~~---------------------------~~~~kl~Dfg~~~~~~~~~~~~~~~~~t~  164 (288)
T 1ob3_A          112 GIAYCHDRRVLHRDLKPQNLLINR---------------------------EGELKIADFGLARAFGIPVRKYTHEIVTL  164 (288)
T ss_dssp             HHHHHHHTTCCCSCCCGGGEEECT---------------------------TSCEEECCTTHHHHHCC---------CCC
T ss_pred             HHHHHHHCCeecCCCCHHHEEEcC---------------------------CCCEEEeECccccccCccccccccccccc
Confidence            689999999999999999999944                           445777777776543221   12246799


Q ss_pred             CcccchhhhcC-CCCccchhHhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHHHHHHhhcCCCCCC
Q 025467           78 HYRAPEVILGL-GWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWP  156 (252)
Q Consensus        78 ~y~aPE~l~~~-~~~~~~Diws~G~~l~~l~~g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~  156 (252)
                      .|+|||++.+. .++.++||||+||++|+|++|..||.+.+..+.+..+....+.++...+.....              
T Consensus       165 ~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------  230 (288)
T 1ob3_A          165 WYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTE--------------  230 (288)
T ss_dssp             TTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGG--------------
T ss_pred             cccCchheeCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHCCCChhhchhhhc--------------
Confidence            99999999764 589999999999999999999999999888888888888777654321111000              


Q ss_pred             ccccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCCCCCH
Q 025467          157 EGAASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTA  236 (252)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~ta  236 (252)
                                    .+.....     .....                +..........++++.+||.+||+.||++|||+
T Consensus       231 --------------~~~~~~~-----~~~~~----------------~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~  275 (288)
T 1ob3_A          231 --------------LPKYDPN-----FTVYE----------------PLPWESFLKGLDESGIDLLSKMLKLDPNQRITA  275 (288)
T ss_dssp             --------------STTCCTT-----CCCCC----------------CCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCH
T ss_pred             --------------ccccccc-----ccccc----------------CccHHHHhhhcCHHHHHHHHHHcCCCcccCCCH
Confidence                          0000000     00000                000011224467789999999999999999999


Q ss_pred             HHHHcCCCCCCc
Q 025467          237 REALRHPFFTRD  248 (252)
Q Consensus       237 ~e~l~hpwf~~~  248 (252)
                      +|+|+||||++.
T Consensus       276 ~e~l~hp~f~~~  287 (288)
T 1ob3_A          276 KQALEHAYFKEN  287 (288)
T ss_dssp             HHHHTSGGGGC-
T ss_pred             HHHhcCcchhhc
Confidence            999999999864

>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*

Probab=100.00  E-value=3e-33  Score=233.47  Aligned_cols=207  Identities=43%  Similarity=0.769  Sum_probs=143.4

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCCCccccCCCcc
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYR   80 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~~~~~~t~~y~   80 (252)
                      ||+|||++||+||||||+|||+...+...+.+....        ..........++|+|||.+...........||+.|+
T Consensus       135 ~L~~lH~~~ivH~Dlkp~NIll~~~~~~~~~~~~~~--------~~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~gt~~y~  206 (355)
T 2eu9_A          135 ALRFLHENQLTHTDLKPENILFVNSEFETLYNEHKS--------CEEKSVKNTSIRVADFGSATFDHEHHTTIVATRHYR  206 (355)
T ss_dssp             HHHHHHTTTEECCCCCGGGEEESCCCEEEEECCC-C--------CCEEEESCCCEEECCCTTCEETTSCCCSSCSCGGGC
T ss_pred             HHHHHHHCCcccCCCCHHHEEEeccccccccccccc--------ccccccCCCcEEEeecCccccccccccCCcCCCccc
Confidence            689999999999999999999965432222111100        000112456789999999987665555668999999


Q ss_pred             cchhhhcCCCCccchhHhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHHHHHHhhcCCCCCCcccc
Q 025467           81 APEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAA  160 (252)
Q Consensus        81 aPE~l~~~~~~~~~Diws~G~~l~~l~~g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (252)
                      |||++.+..++.++||||+||++|+|++|..||.+.+..+.+..+....+++|..+...........  .+...++....
T Consensus       207 aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~--~~~~~~~~~~~  284 (355)
T 2eu9_A          207 PPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTHENREHLVMMEKILGPIPSHMIHRTRKQKYFY--KGGLVWDENSS  284 (355)
T ss_dssp             CHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCHHHHHHCSCGGGEE--TTEECCCTTSH
T ss_pred             CCeeeecCCCCCccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCcHHHhhhccchhhhc--ccccccccccc
Confidence            9999999899999999999999999999999999998889999999999999988876543221111  11111111100


Q ss_pred             chhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCCCCCHHHHH
Q 025467          161 SRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREAL  240 (252)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~ta~e~l  240 (252)
                      .........  +.                              -..........+.++.+||.+||+.||++|||++|+|
T Consensus       285 ~~~~~~~~~--~~------------------------------~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e~l  332 (355)
T 2eu9_A          285 DGRYVKENC--KP------------------------------LKSYMLQDSLEHVQLFDLMRRMLEFDPAQRITLAEAL  332 (355)
T ss_dssp             HHHHHHHHC--CC------------------------------GGGGCSCCSHHHHHHHHHHHHHTCSSTTTSCCHHHHT
T ss_pred             hhccccccC--Cc------------------------------ccccccccchhHHHHHHHHHHHhcCChhhCcCHHHHh
Confidence            000000000  00                              0000011233456899999999999999999999999


Q ss_pred             cCCCCCCcc
Q 025467          241 RHPFFTRDH  249 (252)
Q Consensus       241 ~hpwf~~~~  249 (252)
                      +||||+...
T Consensus       333 ~hp~f~~~~  341 (355)
T 2eu9_A          333 LHPFFAGLT  341 (355)
T ss_dssp             TSGGGGGCC
T ss_pred             cChhhcCCC
Confidence            999998753

>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A

Probab=100.00  E-value=3.6e-33  Score=231.25  Aligned_cols=143  Identities=27%  Similarity=0.417  Sum_probs=112.3

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCC--CccccCCC
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ--NYIVSTRH   78 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~--~~~~~t~~   78 (252)
                      ||+|||++||+||||||+|||++                           .++.++|+|||++.......  ...+||+.
T Consensus       126 al~~lH~~~ivHrDlkp~NIll~---------------------------~~~~~kl~DFG~a~~~~~~~~~~~~~gt~~  178 (328)
T 3fe3_A          126 AVQYCHQKRIVHRDLKAENLLLD---------------------------ADMNIKIADFGFSNEFTVGGKLDAFCGAPP  178 (328)
T ss_dssp             HHHHHHHTTCCCSCCCGGGEEEC---------------------------TTSCEEECSTTCCGGGSSSCGGGTTSSSGG
T ss_pred             HHHHHHHCCEeccCCCHHHEEEc---------------------------CCCCEEEeeccCceecCCCCccccccCCcc
Confidence            68999999999999999999994                           44567888888776443322  23578999


Q ss_pred             cccchhhhcCCCC-ccchhHhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHHHHHHhhcCCCCCCc
Q 025467           79 YRAPEVILGLGWT-YPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPE  157 (252)
Q Consensus        79 y~aPE~l~~~~~~-~~~Diws~G~~l~~l~~g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~  157 (252)
                      |+|||++.+..+. .++||||+||++|+|++|..||.+.+.......+..                       +....| 
T Consensus       179 y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~-----------------------~~~~~p-  234 (328)
T 3fe3_A          179 YAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLR-----------------------GKYRIP-  234 (328)
T ss_dssp             GCCHHHHHTCCCCSHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHH-----------------------CCCCCC-
T ss_pred             eeCcccccCCCcCCchhhhhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHh-----------------------CCCCCC-
Confidence            9999999988775 789999999999999999999987665444333222                       111111 


Q ss_pred             cccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCCCCCHH
Q 025467          158 GAASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAR  237 (252)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~ta~  237 (252)
                                                                            ...+.++.+||.+||+.||.+|||++
T Consensus       235 ------------------------------------------------------~~~s~~~~~li~~~L~~dP~~R~t~~  260 (328)
T 3fe3_A          235 ------------------------------------------------------FYMSTDCENLLKRFLVLNPIKRGTLE  260 (328)
T ss_dssp             ------------------------------------------------------TTSCHHHHHHHHHHCCSSTTTSCCHH
T ss_pred             ------------------------------------------------------CCCCHHHHHHHHHHCCCChhHCcCHH
Confidence                                                                  12346889999999999999999999


Q ss_pred             HHHcCCCCCCc
Q 025467          238 EALRHPFFTRD  248 (252)
Q Consensus       238 e~l~hpwf~~~  248 (252)
                      |+++||||+..
T Consensus       261 eil~h~~~~~~  271 (328)
T 3fe3_A          261 QIMKDRWINAG  271 (328)
T ss_dssp             HHTTCTTTTTT
T ss_pred             HHhcCHhhcCC
Confidence            99999999864

>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...

Probab=100.00  E-value=1.7e-33  Score=237.06  Aligned_cols=184  Identities=31%  Similarity=0.550  Sum_probs=125.7

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCC--CCccccCCC
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD--QNYIVSTRH   78 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~--~~~~~~t~~   78 (252)
                      ||+|||++||+||||||+|||++.                           .+.++|+|||.+......  .....||+.
T Consensus       139 al~~lH~~~ivH~Dlkp~NIl~~~---------------------------~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~  191 (371)
T 2xrw_A          139 GIKHLHSAGIIHRDLKPSNIVVKS---------------------------DCTLKILDFGLARTAGTSFMMTPYVVTRY  191 (371)
T ss_dssp             HHHHHHHTTCCCSCCCGGGEEECT---------------------------TSCEEECCCCC----------------CT
T ss_pred             HHHHHHHCCeecccCCHHHEEEcC---------------------------CCCEEEEEeecccccccccccCCceecCC
Confidence            689999999999999999999954                           445677777777544322  123478999


Q ss_pred             cccchhhhcCCCCccchhHhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHHHHHHhhcCCCCCCcc
Q 025467           79 YRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEG  158 (252)
Q Consensus        79 y~aPE~l~~~~~~~~~Diws~G~~l~~l~~g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~  158 (252)
                      |+|||++.+..++.++||||+||++|+|++|..||.+.+..+.+..+....+.++.++...+......+...... +...
T Consensus       192 y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~  270 (371)
T 2xrw_A          192 YRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQPTVRTYVENRPK-YAGY  270 (371)
T ss_dssp             TCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHC-CCCCCHHHHTTSCHHHHHHHHSSCC-CCCC
T ss_pred             ccCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHHhhhHHHHHHhhCcc-cccc
Confidence            999999999899999999999999999999999999999888899998888888877766655544444333211 1100


Q ss_pred             ccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCCCCCHHH
Q 025467          159 AASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTARE  238 (252)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~ta~e  238 (252)
                           .+.....  ....+                            .........+.++.+||.+||++||++|||++|
T Consensus       271 -----~~~~~~~--~~~~~----------------------------~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e  315 (371)
T 2xrw_A          271 -----SFEKLFP--DVLFP----------------------------ADSEHNKLKASQARDLLSKMLVIDASKRISVDE  315 (371)
T ss_dssp             -----CHHHHSC--GGGSC----------------------------CSSHHHHHHHHHHHHHHHHHSCSSGGGSCCHHH
T ss_pred             -----chhhhcc--cccCc----------------------------ccccccccccHHHHHHHHHHCcCChhhCCCHHH
Confidence                 0000000  00000                            000011223568999999999999999999999


Q ss_pred             HHcCCCCCC
Q 025467          239 ALRHPFFTR  247 (252)
Q Consensus       239 ~l~hpwf~~  247 (252)
                      +|+||||+.
T Consensus       316 ~l~hp~~~~  324 (371)
T 2xrw_A          316 ALQHPYINV  324 (371)
T ss_dssp             HHHSHHHHT
T ss_pred             HhCCcchhh
Confidence            999999974

>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...

Probab=100.00  E-value=3.3e-33  Score=234.70  Aligned_cols=174  Identities=30%  Similarity=0.519  Sum_probs=129.4

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCC------CCccc
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD------QNYIV   74 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~------~~~~~   74 (252)
                      ||+|||++||+||||||+|||++.                           .+.++|+|||.+......      .....
T Consensus       140 aL~~LH~~~ivH~Dikp~NIl~~~---------------------------~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~  192 (364)
T 3qyz_A          140 GLKYIHSANVLHRDLKPSNLLLNT---------------------------TCDLKICDFGLARVADPDHDHTGFLTEYV  192 (364)
T ss_dssp             HHHHHHHTTEECCCCCGGGEEECT---------------------------TCCEEECCCTTCEECCGGGCBCCTTCCCC
T ss_pred             HHHHHHHCCeecCCCChHhEEECC---------------------------CCCEEEEeCcceEecCCCCCccccccccc
Confidence            689999999999999999999944                           445677777776543221      12347


Q ss_pred             cCCCcccchhhhcC-CCCccchhHhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHHHHHHhhcCCC
Q 025467           75 STRHYRAPEVILGL-GWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRL  153 (252)
Q Consensus        75 ~t~~y~aPE~l~~~-~~~~~~Diws~G~~l~~l~~g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~  153 (252)
                      ||+.|+|||++.+. .++.++||||+||++|+|++|..||.+.+..+.+..+....|.++.+.+..+.............
T Consensus       193 gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~  272 (364)
T 3qyz_A          193 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLP  272 (364)
T ss_dssp             SCGGGCCHHHHHTBCSCSTHHHHHHHHHHHHHHHHSSCSSCCSSGGGHHHHHHHHHCSCCHHHHHTCCCHHHHHHHHTSC
T ss_pred             cccCCCCCHHhcCCCCCCcchhHHHHHHHHHHHHHCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhhhhhHHHHHHhcC
Confidence            89999999987654 58999999999999999999999999999999999999999998877655443211111100000


Q ss_pred             CCCccccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCCC
Q 025467          154 DWPEGAASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDR  233 (252)
Q Consensus       154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R  233 (252)
                       ....                                              ..........+.++.+||.+||++||++|
T Consensus       273 -~~~~----------------------------------------------~~~~~~~~~~~~~~~~li~~~L~~dP~~R  305 (364)
T 3qyz_A          273 -HKNK----------------------------------------------VPWNRLFPNADSKALDLLDKMLTFNPHKR  305 (364)
T ss_dssp             -CCCC----------------------------------------------CCHHHHCTTSCHHHHHHHHHHTCSSTTTS
T ss_pred             -CccC----------------------------------------------CCHHHhCCCCCHHHHHHHHHHcCCChhhC
Confidence             0000                                              00011123456789999999999999999


Q ss_pred             CCHHHHHcCCCCCCc
Q 025467          234 LTAREALRHPFFTRD  248 (252)
Q Consensus       234 ~ta~e~l~hpwf~~~  248 (252)
                      ||++|+|+||||+..
T Consensus       306 ~t~~e~l~hp~~~~~  320 (364)
T 3qyz_A          306 IEVEQALAHPYLEQY  320 (364)
T ss_dssp             CCHHHHHTSGGGTTT
T ss_pred             CCHHHHhcCcchhhc
Confidence            999999999999874

>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*

Probab=100.00  E-value=1.7e-33  Score=233.36  Aligned_cols=179  Identities=30%  Similarity=0.494  Sum_probs=124.0

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCC---CCccccCC
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD---QNYIVSTR   77 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~---~~~~~~t~   77 (252)
                      ||+|||++||+||||||+|||+..++.                      .....++|+|||.+......   .....+|+
T Consensus       144 ~l~~LH~~~ivH~Dlkp~NIll~~~~~----------------------~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~t~  201 (329)
T 3gbz_A          144 GVNFCHSRRCLHRDLKPQNLLLSVSDA----------------------SETPVLKIGDFGLARAFGIPIRQFTHEIITL  201 (329)
T ss_dssp             HHHHHHHTTCCCSCCCGGGEEEEC---------------------------CCEEEECCTTHHHHHC-----------CC
T ss_pred             HHHHHHhCCEECCCCCHHHEEEecCCC----------------------CccceEEECcCCCccccCCcccccCCCcCCc
Confidence            689999999999999999999964431                      23445889999988654322   22346799


Q ss_pred             CcccchhhhcC-CCCccchhHhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHHHHHHhhcCCCCCC
Q 025467           78 HYRAPEVILGL-GWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWP  156 (252)
Q Consensus        78 ~y~aPE~l~~~-~~~~~~Diws~G~~l~~l~~g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~  156 (252)
                      .|+|||++.+. .++.++||||+||++|+|++|..||.+....+.+..+....+.++...+.....              
T Consensus       202 ~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------  267 (329)
T 3gbz_A          202 WYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSEIDQLFKIFEVLGLPDDTTWPGVTA--------------  267 (329)
T ss_dssp             TTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCTTTSTTGGG--------------
T ss_pred             cccCHHHhcCCCCCCcHHHHHHHHHHHHHHHHCCCCcCCCCHHHHHHHHHHHhCCCchhhhhhhhh--------------
Confidence            99999999875 489999999999999999999999999888888888888887665432111100              


Q ss_pred             ccccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCCCCCH
Q 025467          157 EGAASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTA  236 (252)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~ta  236 (252)
                                    .+     .+......+..               ...........++++.+||.+||++||++|||+
T Consensus       268 --------------~~-----~~~~~~~~~~~---------------~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~  313 (329)
T 3gbz_A          268 --------------LP-----DWKQSFPKFRG---------------KTLKRVLGALLDDEGLDLLTAMLEMDPVKRISA  313 (329)
T ss_dssp             --------------ST-----TCCTTCCCCCC---------------CCHHHHHGGGSCHHHHHHHHHHTCSSGGGSCCH
T ss_pred             --------------hh-----hhhhhhhhhcc---------------ccHhhhcccccCHHHHHHHHHHccCChhhCCCH
Confidence                          00     00000000000               000011123356789999999999999999999


Q ss_pred             HHHHcCCCCCCcc
Q 025467          237 REALRHPFFTRDH  249 (252)
Q Consensus       237 ~e~l~hpwf~~~~  249 (252)
                      +|+|+||||+...
T Consensus       314 ~e~l~hp~f~~~~  326 (329)
T 3gbz_A          314 KNALEHPYFSHND  326 (329)
T ss_dssp             HHHHTSGGGSSSC
T ss_pred             HHHhCCcccCCCC
Confidence            9999999999764

>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}

Probab=100.00  E-value=6.4e-33  Score=234.44  Aligned_cols=172  Identities=31%  Similarity=0.601  Sum_probs=130.3

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCC--CCccccCCC
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD--QNYIVSTRH   78 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~--~~~~~~t~~   78 (252)
                      ||+|||++||+||||||+|||++.                          ..+.++|+|||.+......  .....+|+.
T Consensus       153 aL~~LH~~gi~H~Dikp~Nil~~~--------------------------~~~~~kl~Dfg~a~~~~~~~~~~~~~~t~~  206 (383)
T 3eb0_A          153 AVGFIHSLGICHRDIKPQNLLVNS--------------------------KDNTLKLCDFGSAKKLIPSEPSVAYICSRF  206 (383)
T ss_dssp             HHHHHHTTTEECSCCCGGGEEEET--------------------------TTTEEEECCCTTCEECCTTSCCCCCCCCSS
T ss_pred             HHHHHHHCcCccCccCHHHEEEcC--------------------------CCCcEEEEECCCCcccCCCCCCcCcccCCC
Confidence            689999999999999999999952                          2345788888888654332  233478999


Q ss_pred             cccchhhhcCC-CCccchhHhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHHHHHHhhcCCCCCCc
Q 025467           79 YRAPEVILGLG-WTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPE  157 (252)
Q Consensus        79 y~aPE~l~~~~-~~~~~Diws~G~~l~~l~~g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~  157 (252)
                      |+|||++.+.. ++.++||||+||++|+|++|..||.+.+..+.+..+....|.++.+.+.......      ....++.
T Consensus       207 y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~------~~~~~~~  280 (383)
T 3eb0_A          207 YRAPELMLGATEYTPSIDLWSIGCVFGELILGKPLFSGETSIDQLVRIIQIMGTPTKEQMIRMNPHY------TEVRFPT  280 (383)
T ss_dssp             CCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCTTC--------CCCCC
T ss_pred             ccCHHHhcCCCCCCcchhhhhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhCccc------ccccCCc
Confidence            99999998754 8999999999999999999999999999999999999999998876654432110      0001110


Q ss_pred             cccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCCCCCHH
Q 025467          158 GAASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAR  237 (252)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~ta~  237 (252)
                      ..  .                                         ...........+.++.+||.+||++||.+|||+.
T Consensus       281 ~~--~-----------------------------------------~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~  317 (383)
T 3eb0_A          281 LK--A-----------------------------------------KDWRKILPEGTPSLAIDLLEQILRYEPDLRINPY  317 (383)
T ss_dssp             CC--C-----------------------------------------CCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCCHH
T ss_pred             cC--c-----------------------------------------ccHHhhCCCCCCHHHHHHHHHHccCChhhCCCHH
Confidence            00  0                                         0000111234567899999999999999999999


Q ss_pred             HHHcCCCCCC
Q 025467          238 EALRHPFFTR  247 (252)
Q Consensus       238 e~l~hpwf~~  247 (252)
                      |+|+||||+.
T Consensus       318 e~l~hp~f~~  327 (383)
T 3eb0_A          318 EAMAHPFFDH  327 (383)
T ss_dssp             HHHTSGGGHH
T ss_pred             HHhcCHHHHH
Confidence            9999999975

>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*

Probab=100.00  E-value=3.5e-33  Score=233.33  Aligned_cols=177  Identities=27%  Similarity=0.458  Sum_probs=125.7

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCC-------CCCcc
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERP-------DQNYI   73 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~-------~~~~~   73 (252)
                      ||+|||++||+||||||+|||++.+                           +.++|+|||.+.....       .....
T Consensus       136 ~l~~LH~~~ivH~Dlkp~NIl~~~~---------------------------~~~kl~Dfg~a~~~~~~~~~~~~~~~~~  188 (351)
T 3mi9_A          136 GLYYIHRNKILHRDMKAANVLITRD---------------------------GVLKLADFGLARAFSLAKNSQPNRYTNR  188 (351)
T ss_dssp             HHHHHHHTTEECCCCSGGGEEECTT---------------------------SCEEECCCTTCEECCCCSSSSCCCCCSS
T ss_pred             HHHHHHHCCeeCCCCCHHHEEEcCC---------------------------CCEEEccchhcccccccccccccccCCc
Confidence            6899999999999999999999544                           4567777776653321       11224


Q ss_pred             ccCCCcccchhhhcC-CCCccchhHhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHHHHHHhhcCC
Q 025467           74 VSTRHYRAPEVILGL-GWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGR  152 (252)
Q Consensus        74 ~~t~~y~aPE~l~~~-~~~~~~Diws~G~~l~~l~~g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~  152 (252)
                      .||+.|+|||++.+. .++.++||||+||++|+|++|..||.+.+....+..+....+.++...+.........    ..
T Consensus       189 ~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~----~~  264 (351)
T 3mi9_A          189 VVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPEVWPNVDNYELY----EK  264 (351)
T ss_dssp             CSCGGGCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGCGGG----TS
T ss_pred             ccccCccCchhhcCCCCCCcHhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChhhccccccchhh----cc
Confidence            679999999999864 5799999999999999999999999999988999999998888775443222210000    00


Q ss_pred             CCCCccccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCC
Q 025467          153 LDWPEGAASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTD  232 (252)
Q Consensus       153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~  232 (252)
                      ......                                    .......   .   ......++++.+||.+||++||++
T Consensus       265 ~~~~~~------------------------------------~~~~~~~---~---~~~~~~~~~~~~li~~~L~~dP~~  302 (351)
T 3mi9_A          265 LELVKG------------------------------------QKRKVKD---R---LKAYVRDPYALDLIDKLLVLDPAQ  302 (351)
T ss_dssp             SCCCSS------------------------------------CCCCHHH---H---HHHHHCCHHHHHHHHHHSCSSGGG
T ss_pred             cccccc------------------------------------cccCHHH---H---hhhccCChHHHHHHHHHhcCChhh
Confidence            000000                                    0000000   0   000113567999999999999999


Q ss_pred             CCCHHHHHcCCCCCCccc
Q 025467          233 RLTAREALRHPFFTRDHL  250 (252)
Q Consensus       233 R~ta~e~l~hpwf~~~~~  250 (252)
                      |||++|+|+||||++.+.
T Consensus       303 R~t~~e~l~hp~f~~~~~  320 (351)
T 3mi9_A          303 RIDSDDALNHDFFWSDPM  320 (351)
T ss_dssp             SCCHHHHHTSGGGGSSSC
T ss_pred             CCCHHHHhCCCCcCCCCC
Confidence            999999999999988654

>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7

Probab=100.00  E-value=6.8e-33  Score=228.63  Aligned_cols=143  Identities=29%  Similarity=0.487  Sum_probs=115.4

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCCCccccCCCcc
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYR   80 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~~~~~~t~~y~   80 (252)
                      ||+|||++||+||||||+|||++                           ..+.++|+|||++..........+||+.|+
T Consensus       118 aL~~LH~~~ivHrDlkp~NIll~---------------------------~~g~~kL~Dfg~a~~~~~~~~~~~gt~~y~  170 (318)
T 1fot_A          118 ALEYLHSKDIIYRDLKPENILLD---------------------------KNGHIKITDFGFAKYVPDVTYTLCGTPDYI  170 (318)
T ss_dssp             HHHHHHTTTEECCCCCGGGEEEC---------------------------TTSCEEECCCSSCEECSSCBCCCCSCTTTC
T ss_pred             HHHHHHHCCccccCCChheEEEc---------------------------CCCCEEEeecCcceecCCccccccCCcccc
Confidence            68999999999999999999994                           445678888888766554444568999999


Q ss_pred             cchhhhcCCCCccchhHhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHHHHHHhhcCCCCCCcccc
Q 025467           81 APEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAA  160 (252)
Q Consensus        81 aPE~l~~~~~~~~~Diws~G~~l~~l~~g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (252)
                      |||++.+..++.++|+||+||++|+|++|..||.+.+.......+...                       ...++    
T Consensus       171 aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~-----------------------~~~~p----  223 (318)
T 1fot_A          171 APEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMKTYEKILNA-----------------------ELRFP----  223 (318)
T ss_dssp             CHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHC-----------------------CCCCC----
T ss_pred             CHhHhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHhC-----------------------CCCCC----
Confidence            999999889999999999999999999999999876655444433221                       11111    


Q ss_pred             chhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCCCC-----C
Q 025467          161 SRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRL-----T  235 (252)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~-----t  235 (252)
                                                                         ...+.++.+||.+||+.||++|+     |
T Consensus       224 ---------------------------------------------------~~~~~~~~~li~~lL~~dp~~R~~~~~~~  252 (318)
T 1fot_A          224 ---------------------------------------------------PFFNEDVKDLLSRLITRDLSQRLGNLQNG  252 (318)
T ss_dssp             ---------------------------------------------------TTSCHHHHHHHHHHTCSCTTTCTTSSTTT
T ss_pred             ---------------------------------------------------CCCCHHHHHHHHHHhccCHHHcCCCcCCC
Confidence                                                               12346889999999999999999     9


Q ss_pred             HHHHHcCCCCCCc
Q 025467          236 AREALRHPFFTRD  248 (252)
Q Consensus       236 a~e~l~hpwf~~~  248 (252)
                      ++++++||||+..
T Consensus       253 ~~~i~~hp~f~~~  265 (318)
T 1fot_A          253 TEDVKNHPWFKEV  265 (318)
T ss_dssp             THHHHTSGGGSSC
T ss_pred             HHHHhcCccccCC
Confidence            9999999999864

>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}

Probab=100.00  E-value=1.4e-32  Score=227.67  Aligned_cols=152  Identities=28%  Similarity=0.429  Sum_probs=118.7

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCC--CCccccCCC
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD--QNYIVSTRH   78 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~--~~~~~~t~~   78 (252)
                      ||+|||++||+||||||+|||+..++                       .....++|+|||.+......  .....||+.
T Consensus       126 al~~lH~~~ivH~Dlkp~NIll~~~~-----------------------~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~  182 (326)
T 2y0a_A          126 GVYYLHSLQIAHFDLKPENIMLLDRN-----------------------VPKPRIKIIDFGLAHKIDFGNEFKNIFGTPE  182 (326)
T ss_dssp             HHHHHHHTTEECCCCCGGGEEESCSS-----------------------SSSCCEEECCCTTCEECCTTSCCCCCCSCTT
T ss_pred             HHHHHHHCCeEcCCCCHHHEEEecCC-----------------------CCCCCEEEEECCCCeECCCCCccccccCCcC
Confidence            68999999999999999999996543                       12336788899888654322  233578999


Q ss_pred             cccchhhhcCCCCccchhHhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHHHHHHhhcCCCCCCcc
Q 025467           79 YRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEG  158 (252)
Q Consensus        79 y~aPE~l~~~~~~~~~Diws~G~~l~~l~~g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~  158 (252)
                      |+|||++.+..++.++||||+||++|+|++|..||.+....+.+..+.......+...                      
T Consensus       183 y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~----------------------  240 (326)
T 2y0a_A          183 FVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEY----------------------  240 (326)
T ss_dssp             TCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHHTCCCCCHHH----------------------
T ss_pred             cCCceeecCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHHhcCCCcCccc----------------------
Confidence            9999999988899999999999999999999999988766555554433222221110                      


Q ss_pred             ccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCCCCCHHH
Q 025467          159 AASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTARE  238 (252)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~ta~e  238 (252)
                                                                          ....+..+.+||.+||+.||.+|||+.|
T Consensus       241 ----------------------------------------------------~~~~~~~~~~li~~~L~~dP~~Rpt~~e  268 (326)
T 2y0a_A          241 ----------------------------------------------------FSNTSALAKDFIRRLLVKDPKKRMTIQD  268 (326)
T ss_dssp             ----------------------------------------------------HTTSCHHHHHHHHHHSCSSGGGSCCHHH
T ss_pred             ----------------------------------------------------cccCCHHHHHHHHHHccCChhhCCCHHH
Confidence                                                                1234568899999999999999999999


Q ss_pred             HHcCCCCCCcc
Q 025467          239 ALRHPFFTRDH  249 (252)
Q Consensus       239 ~l~hpwf~~~~  249 (252)
                      +|+||||+...
T Consensus       269 ~l~hp~~~~~~  279 (326)
T 2y0a_A          269 SLQHPWIKPKD  279 (326)
T ss_dssp             HHHSTTTSCCS
T ss_pred             HhcCCCccCCc
Confidence            99999998653

>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}

Probab=100.00  E-value=2.4e-33  Score=234.51  Aligned_cols=143  Identities=29%  Similarity=0.453  Sum_probs=112.0

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCC---CCccccCC
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD---QNYIVSTR   77 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~---~~~~~~t~   77 (252)
                      ||+|||++||+||||||+|||++.                           .+.++|+|||+++.....   ....+||+
T Consensus       136 aL~~LH~~givHrDlkp~NILl~~---------------------------~g~ikL~DFG~a~~~~~~~~~~~~~~gt~  188 (353)
T 3txo_A          136 ALMFLHDKGIIYRDLKLDNVLLDH---------------------------EGHCKLADFGMCKEGICNGVTTATFCGTP  188 (353)
T ss_dssp             HHHHHHHTTCBCCCCCGGGEEECT---------------------------TSCEEECCCTTCBCSCC---------CCG
T ss_pred             HHHHHHHCCCcccCCCHHHEEECC---------------------------CCCEEEccccceeecccCCccccccCCCc
Confidence            689999999999999999999944                           455777777777643221   22357999


Q ss_pred             CcccchhhhcCCCCccchhHhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHHHHHHhhcCCCCCCc
Q 025467           78 HYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPE  157 (252)
Q Consensus        78 ~y~aPE~l~~~~~~~~~Diws~G~~l~~l~~g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~  157 (252)
                      .|+|||++.+..++.++||||+||++|+|++|..||.+.+..+....+....                       ..++ 
T Consensus       189 ~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~~~~~i~~~~-----------------------~~~p-  244 (353)
T 3txo_A          189 DYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAILNDE-----------------------VVYP-  244 (353)
T ss_dssp             GGCCHHHHHHHHCTTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCC-----------------------CCCC-
T ss_pred             CeEChhhcCCCCcCCccCCCcchHHHHHHHhCCCCCCCCCHHHHHHHHHcCC-----------------------CCCC-
Confidence            9999999998889999999999999999999999998877665555443311                       1111 


Q ss_pred             cccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCCCCCH-
Q 025467          158 GAASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTA-  236 (252)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~ta-  236 (252)
                                                                            ...+.++.+||++||+.||.+|||+ 
T Consensus       245 ------------------------------------------------------~~~~~~~~~li~~lL~~dP~~R~~~~  270 (353)
T 3txo_A          245 ------------------------------------------------------TWLHEDATGILKSFMTKNPTMRLGSL  270 (353)
T ss_dssp             ------------------------------------------------------TTSCHHHHHHHHHHTCSSGGGSTTSG
T ss_pred             ------------------------------------------------------CCCCHHHHHHHHHHhhhCHHHccCCc
Confidence                                                                  1234688999999999999999999 


Q ss_pred             -----HHHHcCCCCCCc
Q 025467          237 -----REALRHPFFTRD  248 (252)
Q Consensus       237 -----~e~l~hpwf~~~  248 (252)
                           +++++||||+..
T Consensus       271 ~~~~~~~il~hp~f~~~  287 (353)
T 3txo_A          271 TQGGEHAILRHPFFKEI  287 (353)
T ss_dssp             GGTCTHHHHTSGGGTTC
T ss_pred             ccCCHHHHhhCCcccCC
Confidence                 999999999874

>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*

Probab=99.98  E-value=7e-33  Score=226.53  Aligned_cols=147  Identities=29%  Similarity=0.467  Sum_probs=114.0

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCC---CccccCC
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ---NYIVSTR   77 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~---~~~~~t~   77 (252)
                      ||+|||++||+||||||+|||++.                           .+.++|+|||.+.......   ....||+
T Consensus       128 ~l~~lH~~~i~H~Dlkp~Nil~~~---------------------------~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~  180 (297)
T 3fxz_A          128 ALEFLHSNQVIHRDIKSDNILLGM---------------------------DGSVKLTDFGFCAQITPEQSKRSTMVGTP  180 (297)
T ss_dssp             HHHHHHHTTEECCCCSGGGEEECT---------------------------TCCEEECCCTTCEECCSTTCCBCCCCSCG
T ss_pred             HHHHHHhCCceeCCCCHHHEEECC---------------------------CCCEEEeeCCCceecCCcccccCCccCCc
Confidence            689999999999999999999944                           4457777777765433221   2347899


Q ss_pred             CcccchhhhcCCCCccchhHhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHHHHHHhhcCCCCCCc
Q 025467           78 HYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPE  157 (252)
Q Consensus        78 ~y~aPE~l~~~~~~~~~Diws~G~~l~~l~~g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~  157 (252)
                      .|+|||++.+..++.++||||+||++|+|++|..||.+.+.......+.....+.                    .    
T Consensus       181 ~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~--------------------~----  236 (297)
T 3fxz_A          181 YWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPE--------------------L----  236 (297)
T ss_dssp             GGCCHHHHHCSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHHCSCC--------------------C----
T ss_pred             CccChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCC--------------------C----
Confidence            9999999999999999999999999999999999998776554443332211100                    0    


Q ss_pred             cccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCCCCCHH
Q 025467          158 GAASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAR  237 (252)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~ta~  237 (252)
                                                                         ......+..+.+||.+||+.||++|||++
T Consensus       237 ---------------------------------------------------~~~~~~~~~~~~li~~~l~~dp~~Rps~~  265 (297)
T 3fxz_A          237 ---------------------------------------------------QNPEKLSAIFRDFLNRCLEMDVEKRGSAK  265 (297)
T ss_dssp             ---------------------------------------------------SCGGGSCHHHHHHHHHHSCSSTTTSCCHH
T ss_pred             ---------------------------------------------------CCccccCHHHHHHHHHHccCChhHCcCHH
Confidence                                                               00123456899999999999999999999


Q ss_pred             HHHcCCCCCCcc
Q 025467          238 EALRHPFFTRDH  249 (252)
Q Consensus       238 e~l~hpwf~~~~  249 (252)
                      |+|+||||+...
T Consensus       266 ell~h~~~~~~~  277 (297)
T 3fxz_A          266 ELLQHQFLKIAK  277 (297)
T ss_dssp             HHTTCGGGGGCC
T ss_pred             HHhhChhhcccC
Confidence            999999998654

>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}

Probab=99.98  E-value=1.5e-32  Score=225.64  Aligned_cols=175  Identities=30%  Similarity=0.558  Sum_probs=125.0

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCC---CccccCC
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ---NYIVSTR   77 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~---~~~~~t~   77 (252)
                      ||+|||++||+||||||+||+++.                           .+.++|+|||.+.......   ....||.
T Consensus       114 ~l~~lH~~~ivH~dlkp~Nil~~~---------------------------~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~  166 (311)
T 4agu_A          114 AVNFCHKHNCIHRDVKPENILITK---------------------------HSVIKLCDFGFARLLTGPSDYYDDEVATR  166 (311)
T ss_dssp             HHHHHHHTTEECCCCSGGGEEECT---------------------------TSCEEECCCTTCEECC------------G
T ss_pred             HHHHHHHCCCcCCCCChhhEEEcC---------------------------CCCEEEeeCCCchhccCcccccCCCcCCc
Confidence            689999999999999999999943                           4457778888776543221   2346888


Q ss_pred             Ccccchhhhc-CCCCccchhHhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHHHHHHhhcCCCCCC
Q 025467           78 HYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWP  156 (252)
Q Consensus        78 ~y~aPE~l~~-~~~~~~~Diws~G~~l~~l~~g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~  156 (252)
                      .|+|||++.+ ..++.++||||+||++|++++|..||.+....+....+....+.++...........  .........+
T Consensus       167 ~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~  244 (311)
T 4agu_A          167 WYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQLYLIRKTLGDLIPRHQQVFSTNQ--YFSGVKIPDP  244 (311)
T ss_dssp             GGCCHHHHHTCSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHHHHTCG--GGTTCCCCCC
T ss_pred             cccChHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhccccccccccccccc--ccccCcCCCc
Confidence            9999999986 567999999999999999999999999999888888888888887765543332110  0000001000


Q ss_pred             ccccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCCCCCH
Q 025467          157 EGAASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTA  236 (252)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~ta  236 (252)
                      ...                                             ..........+.++.+||.+||++||++|||+
T Consensus       245 ~~~---------------------------------------------~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~  279 (311)
T 4agu_A          245 EDM---------------------------------------------EPLELKFPNISYPALGLLKGCLHMDPTERLTC  279 (311)
T ss_dssp             SSC---------------------------------------------CCHHHHCTTCCHHHHHHHHHHCCSSTTTSCCH
T ss_pred             ccc---------------------------------------------chhhhhcccccHHHHHHHHHHccCChhhcCCH
Confidence            000                                             00011123466789999999999999999999


Q ss_pred             HHHHcCCCCCCcc
Q 025467          237 REALRHPFFTRDH  249 (252)
Q Consensus       237 ~e~l~hpwf~~~~  249 (252)
                      +|+|+||||+...
T Consensus       280 ~ell~hp~f~~~~  292 (311)
T 4agu_A          280 EQLLHHPYFENIR  292 (311)
T ss_dssp             HHHHTSGGGTTCC
T ss_pred             HHHhcChHHHhcc
Confidence            9999999999754

>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}

Probab=99.98  E-value=2e-32  Score=235.15  Aligned_cols=149  Identities=30%  Similarity=0.476  Sum_probs=117.3

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCC---CccccCC
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ---NYIVSTR   77 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~---~~~~~t~   77 (252)
                      ||+|||++||+||||||+|||++.+                        .....++|+|||++.......   ....||+
T Consensus       122 aL~~lH~~givHrDlKp~NIll~~~------------------------~~~~~vkL~DFG~a~~~~~~~~~~~~~~gt~  177 (444)
T 3soa_A          122 AVLHCHQMGVVHRNLKPENLLLASK------------------------LKGAAVKLADFGLAIEVEGEQQAWFGFAGTP  177 (444)
T ss_dssp             HHHHHHHTTCBCCCCSSTTEEESBS------------------------STTCCEEECCCSSCBCCCTTCCBCCCSCSCG
T ss_pred             HHHHHHHCCccccCCCHHHEEEecc------------------------CCCCcEEEccCceeEEecCCCceeecccCCc
Confidence            6899999999999999999999642                        134568889999886544332   2357899


Q ss_pred             CcccchhhhcCCCCccchhHhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHHHHHHhhcCCCCCCc
Q 025467           78 HYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPE  157 (252)
Q Consensus        78 ~y~aPE~l~~~~~~~~~Diws~G~~l~~l~~g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~  157 (252)
                      .|+|||++.+..++.++||||+||++|+|++|..||.+.+.......+.......                       +.
T Consensus       178 ~Y~APE~l~~~~~~~~~DIwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~~-----------------------~~  234 (444)
T 3soa_A          178 GYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDF-----------------------PS  234 (444)
T ss_dssp             GGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHTCCCC-----------------------CT
T ss_pred             ccCCHHHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCccHHHHHHHHHhCCCCC-----------------------Cc
Confidence            9999999998889999999999999999999999998877655554443321111                       10


Q ss_pred             cccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCCCCCHH
Q 025467          158 GAASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAR  237 (252)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~ta~  237 (252)
                                                                         ..+...++++.+||.+||+.||.+|||+.
T Consensus       235 ---------------------------------------------------~~~~~~s~~~~~li~~~L~~dP~~Rpta~  263 (444)
T 3soa_A          235 ---------------------------------------------------PEWDTVTPEAKDLINKMLTINPSKRITAA  263 (444)
T ss_dssp             ---------------------------------------------------TTTTTSCHHHHHHHHHHSCSSTTTSCCHH
T ss_pred             ---------------------------------------------------cccccCCHHHHHHHHHHcCCChhHCCCHH
Confidence                                                               01134567899999999999999999999


Q ss_pred             HHHcCCCCCC
Q 025467          238 EALRHPFFTR  247 (252)
Q Consensus       238 e~l~hpwf~~  247 (252)
                      |+|+||||+.
T Consensus       264 e~L~hp~~~~  273 (444)
T 3soa_A          264 EALKHPWISH  273 (444)
T ss_dssp             HHHHSCTTHH
T ss_pred             HHhcCccccC
Confidence            9999999964

>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...

Probab=99.98  E-value=1.7e-32  Score=227.93  Aligned_cols=143  Identities=27%  Similarity=0.468  Sum_probs=112.3

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCC---CCCccccCC
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERP---DQNYIVSTR   77 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~---~~~~~~~t~   77 (252)
                      ||+|||++||+||||||+|||++.                           .+.++|+|||+++....   .....+||+
T Consensus       117 aL~~LH~~~ivHrDlkp~NIll~~---------------------------~g~vkL~DFG~a~~~~~~~~~~~~~~gt~  169 (337)
T 1o6l_A          117 ALEYLHSRDVVYRDIKLENLMLDK---------------------------DGHIKITDFGLCKEGISDGATMKTFCGTP  169 (337)
T ss_dssp             HHHHHHHTTCBCCCCCGGGEEECT---------------------------TSCEEECCCTTCBCSCCTTCCBCCCEECG
T ss_pred             HHHHHHHCCeecCcCCHHHEEECC---------------------------CCCEEEeeccchhhcccCCCcccccccCh
Confidence            689999999999999999999944                           44577777777754222   122357899


Q ss_pred             CcccchhhhcCCCCccchhHhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHHHHHHhhcCCCCCCc
Q 025467           78 HYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPE  157 (252)
Q Consensus        78 ~y~aPE~l~~~~~~~~~Diws~G~~l~~l~~g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~  157 (252)
                      .|+|||++.+..++.++|+||+||++|+|++|..||.+.+.......+...                       ...+| 
T Consensus       170 ~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~~~-----------------------~~~~p-  225 (337)
T 1o6l_A          170 EYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILME-----------------------EIRFP-  225 (337)
T ss_dssp             GGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHC-----------------------CCCCC-
T ss_pred             hhCChhhhcCCCCCchhhcccchhHHHHHhcCCCCCCCCCHHHHHHHHHcC-----------------------CCCCC-
Confidence            999999999889999999999999999999999999876654443332210                       11111 


Q ss_pred             cccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCCCC---
Q 025467          158 GAASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRL---  234 (252)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~---  234 (252)
                                                                            ...+.++.+||.+||+.||.+||   
T Consensus       226 ------------------------------------------------------~~~s~~~~~li~~lL~~dP~~R~g~~  251 (337)
T 1o6l_A          226 ------------------------------------------------------RTLSPEAKSLLAGLLKKDPKQRLGGG  251 (337)
T ss_dssp             ------------------------------------------------------TTSCHHHHHHHHHHTCSSTTTSTTCS
T ss_pred             ------------------------------------------------------CCCCHHHHHHHHHHhhcCHHHhcCCC
Confidence                                                                  12356899999999999999999   


Q ss_pred             --CHHHHHcCCCCCCc
Q 025467          235 --TAREALRHPFFTRD  248 (252)
Q Consensus       235 --ta~e~l~hpwf~~~  248 (252)
                        |++|+++||||+..
T Consensus       252 ~~~~~ei~~h~~f~~~  267 (337)
T 1o6l_A          252 PSDAKEVMEHRFFLSI  267 (337)
T ss_dssp             TTTHHHHHTSGGGTTC
T ss_pred             CCCHHHHHcCCCcCCC
Confidence              99999999999864

>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7

Probab=99.98  E-value=5.7e-33  Score=231.71  Aligned_cols=172  Identities=29%  Similarity=0.515  Sum_probs=123.4

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCC---CCccccCC
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD---QNYIVSTR   77 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~---~~~~~~t~   77 (252)
                      ||+|||++||+||||||+|||++.+                           +.++|+|||.+......   .....+|+
T Consensus       124 ~l~~lH~~~ivH~Dlkp~Nil~~~~---------------------------~~~kl~Dfg~a~~~~~~~~~~~~~~~t~  176 (346)
T 1ua2_A          124 GLEYLHQHWILHRDLKPNNLLLDEN---------------------------GVLKLADFGLAKSFGSPNRAYTHQVVTR  176 (346)
T ss_dssp             HHHHHHHTTCCCCCCCGGGEEECTT---------------------------CCEEECCCGGGSTTTSCCCCCCCSCCCC
T ss_pred             HHHHHHHCCEECCCCCHHHEEEcCC---------------------------CCEEEEecccceeccCCcccCCcccccc
Confidence            6899999999999999999999544                           45667777766543221   22347899


Q ss_pred             CcccchhhhcC-CCCccchhHhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHHHHHHhhcCCCCCC
Q 025467           78 HYRAPEVILGL-GWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWP  156 (252)
Q Consensus        78 ~y~aPE~l~~~-~~~~~~Diws~G~~l~~l~~g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~  156 (252)
                      .|+|||++.+. .++.++||||+||++|+|++|.+||.+.+..+.+..+....+.++...+.....            .+
T Consensus       177 ~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~------------~~  244 (346)
T 1ua2_A          177 WYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPDMCS------------LP  244 (346)
T ss_dssp             TTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCTTTSSSTTS------------ST
T ss_pred             cccCchHhhCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHcCCCChhhhhhhcc------------Cc
Confidence            99999999765 478999999999999999999999999888888888888777655322111000            00


Q ss_pred             ccccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCCCCCH
Q 025467          157 EGAASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTA  236 (252)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~ta  236 (252)
                      ..          .....            ..                ...........+.++.+||.+||+.||++|||+
T Consensus       245 ~~----------~~~~~------------~~----------------~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~  286 (346)
T 1ua2_A          245 DY----------VTFKS------------FP----------------GIPLHHIFSAAGDDLLDLIQGLFLFNPCARITA  286 (346)
T ss_dssp             TC----------CCCCC------------CC----------------CCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCCH
T ss_pred             cc----------ccccc------------cC----------------CCChHHhhccCCHHHHHHHHHHhccChhhCCCH
Confidence            00          00000            00                000011124456789999999999999999999


Q ss_pred             HHHHcCCCCCCcc
Q 025467          237 REALRHPFFTRDH  249 (252)
Q Consensus       237 ~e~l~hpwf~~~~  249 (252)
                      +|+|+||||+..+
T Consensus       287 ~ell~h~~f~~~~  299 (346)
T 1ua2_A          287 TQALKMKYFSNRP  299 (346)
T ss_dssp             HHHHTSGGGTSSS
T ss_pred             HHHhcChhhhcCC
Confidence            9999999998754

>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*

Probab=99.98  E-value=2e-32  Score=229.57  Aligned_cols=174  Identities=28%  Similarity=0.531  Sum_probs=124.1

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCC--CCccccCCC
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD--QNYIVSTRH   78 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~--~~~~~~t~~   78 (252)
                      ||+|||++||+||||||+|||++.                           .+.++|+|||.+......  .....+|+.
T Consensus       146 ~l~~lH~~~ivH~Dlkp~NIl~~~---------------------------~~~~kl~Dfg~~~~~~~~~~~~~~~~t~~  198 (362)
T 3pg1_A          146 GLHVLHEAGVVHRDLHPGNILLAD---------------------------NNDITICDFNLAREDTADANKTHYVTHRW  198 (362)
T ss_dssp             HHHHHHHTTCCCCCCCGGGEEECT---------------------------TCCEEECCTTC---------------CGG
T ss_pred             HHHHHHHCcCEecCCChHHEEEcC---------------------------CCCEEEEecCcccccccccccceecccce
Confidence            689999999999999999999944                           445777777777543222  223468889


Q ss_pred             cccchhhhc-CCCCccchhHhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHH-HHHHhhcCCCCCC
Q 025467           79 YRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRH-AEKYVRRGRLDWP  156 (252)
Q Consensus        79 y~aPE~l~~-~~~~~~~Diws~G~~l~~l~~g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~-~~~~~~~~~~~~~  156 (252)
                      |+|||++.+ ..++.++||||+||++|++++|..||.+.+..+.+..+....+.++.......... ...+........+
T Consensus       199 y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  278 (362)
T 3pg1_A          199 YRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQLNKIVEVVGTPKIEDVVMFSSPSARDYLRNSLSNVP  278 (362)
T ss_dssp             GCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCHHHHHHTSCHHHHHHTTTCCCCCC
T ss_pred             ecCcHHhcCCCCCCcHhHHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCChHHhhhccchhhhHHHHhhcccCC
Confidence            999999987 56899999999999999999999999999999999999999998876554333221 1111111111111


Q ss_pred             ccccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCCCCCH
Q 025467          157 EGAASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTA  236 (252)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~ta  236 (252)
                      .                                               ..........++.+.+||.+||++||++|||+
T Consensus       279 ~-----------------------------------------------~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~  311 (362)
T 3pg1_A          279 A-----------------------------------------------RAWTAVVPTADPVALDLIAKMLEFNPQRRIST  311 (362)
T ss_dssp             C-----------------------------------------------CCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCH
T ss_pred             h-----------------------------------------------hhHHhhCCCCCHHHHHHHHHHhcCChhhCCCH
Confidence            0                                               00011123456789999999999999999999


Q ss_pred             HHHHcCCCCCCc
Q 025467          237 REALRHPFFTRD  248 (252)
Q Consensus       237 ~e~l~hpwf~~~  248 (252)
                      +|+|+||||+..
T Consensus       312 ~ell~hp~f~~~  323 (362)
T 3pg1_A          312 EQALRHPYFESL  323 (362)
T ss_dssp             HHHHTSGGGTTT
T ss_pred             HHHHcCchhhhc
Confidence            999999999875

>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...

Probab=99.98  E-value=1.2e-32  Score=230.00  Aligned_cols=143  Identities=29%  Similarity=0.519  Sum_probs=116.0

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCCCccccCCCcc
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYR   80 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~~~~~~t~~y~   80 (252)
                      ||+|||++||+||||||+|||++                           ..+.++|+|||++..........+||+.|+
T Consensus       153 aL~~LH~~~ivHrDlkp~NIll~---------------------------~~g~~kL~DFg~a~~~~~~~~~~~gt~~y~  205 (350)
T 1rdq_E          153 TFEYLHSLDLIYRDLKPENLLID---------------------------QQGYIQVTDFGFAKRVKGRTWTLCGTPEAL  205 (350)
T ss_dssp             HHHHHHHTTEECCCCSGGGEEEC---------------------------TTSCEEECCCTTCEECSSCBCCCEECGGGC
T ss_pred             HHHHHHHCCcccccCccceEEEC---------------------------CCCCEEEcccccceeccCCcccccCCcccc
Confidence            68999999999999999999994                           445678888888776554444568999999


Q ss_pred             cchhhhcCCCCccchhHhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHHHHHHhhcCCCCCCcccc
Q 025467           81 APEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAA  160 (252)
Q Consensus        81 aPE~l~~~~~~~~~Diws~G~~l~~l~~g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (252)
                      |||++.+..++.++||||+||++|+|++|..||.+.+.......+...                       ...++    
T Consensus       206 aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~~~-----------------------~~~~p----  258 (350)
T 1rdq_E          206 APEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSG-----------------------KVRFP----  258 (350)
T ss_dssp             CHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHC-----------------------CCCCC----
T ss_pred             CHHHhcCCCCCCcCCEecccHhHhHHhhCCCCCCCCCHHHHHHHHHcC-----------------------CCCCC----
Confidence            999999989999999999999999999999999877655444433221                       11111    


Q ss_pred             chhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCCCCC-----
Q 025467          161 SRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLT-----  235 (252)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~t-----  235 (252)
                                                                         ...+.++.+||.+||+.||.+||+     
T Consensus       259 ---------------------------------------------------~~~~~~~~~li~~lL~~dp~~R~~~~~~~  287 (350)
T 1rdq_E          259 ---------------------------------------------------SHFSSDLKDLLRNLLQVDLTKRFGNLKNG  287 (350)
T ss_dssp             ---------------------------------------------------TTCCHHHHHHHHHHSCSCTTTCTTSSTTT
T ss_pred             ---------------------------------------------------CCCCHHHHHHHHHHhhcCHHhccCCccCC
Confidence                                                               123468899999999999999998     


Q ss_pred             HHHHHcCCCCCCc
Q 025467          236 AREALRHPFFTRD  248 (252)
Q Consensus       236 a~e~l~hpwf~~~  248 (252)
                      ++++++||||+..
T Consensus       288 ~~ei~~h~~f~~~  300 (350)
T 1rdq_E          288 VNDIKNHKWFATT  300 (350)
T ss_dssp             THHHHTSGGGTTC
T ss_pred             HHHHHhCcCcCCC
Confidence            9999999999864

>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*

Probab=99.98  E-value=2.1e-32  Score=228.73  Aligned_cols=143  Identities=27%  Similarity=0.418  Sum_probs=112.9

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCC---CCCccccCC
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERP---DQNYIVSTR   77 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~---~~~~~~~t~   77 (252)
                      ||+|||++||+||||||+|||++.                           .+.++|+|||++.....   .....+||+
T Consensus       133 aL~~LH~~givHrDlkp~NIll~~---------------------------~g~vkL~DFG~a~~~~~~~~~~~~~~gt~  185 (353)
T 2i0e_A          133 GLFFLQSKGIIYRDLKLDNVMLDS---------------------------EGHIKIADFGMCKENIWDGVTTKTFCGTP  185 (353)
T ss_dssp             HHHHHHHTTCBCCCCCGGGEEECT---------------------------TSCEEECCCTTCBCCCCTTCCBCCCCSCG
T ss_pred             HHHHHHHCCEEeccCCHHHEEEcC---------------------------CCcEEEEeCCcccccccCCcccccccCCc
Confidence            689999999999999999999944                           44577777777654221   122357899


Q ss_pred             CcccchhhhcCCCCccchhHhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHHHHHHhhcCCCCCCc
Q 025467           78 HYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPE  157 (252)
Q Consensus        78 ~y~aPE~l~~~~~~~~~Diws~G~~l~~l~~g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~  157 (252)
                      .|+|||++.+..++.++|+||+||++|+|++|..||.+.+.......+...                       ...+| 
T Consensus       186 ~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~~~~~i~~~-----------------------~~~~p-  241 (353)
T 2i0e_A          186 DYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEH-----------------------NVAYP-  241 (353)
T ss_dssp             GGCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHC-----------------------CCCCC-
T ss_pred             cccChhhhcCCCcCCcccccchHHHHHHHHcCCCCCCCCCHHHHHHHHHhC-----------------------CCCCC-
Confidence            999999999889999999999999999999999999887665554443321                       11111 


Q ss_pred             cccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCCCC---
Q 025467          158 GAASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRL---  234 (252)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~---  234 (252)
                                                                            ...+.++.+||.+||+.||.+||   
T Consensus       242 ------------------------------------------------------~~~s~~~~~li~~lL~~dP~~R~~~~  267 (353)
T 2i0e_A          242 ------------------------------------------------------KSMSKEAVAICKGLMTKHPGKRLGCG  267 (353)
T ss_dssp             ------------------------------------------------------TTSCHHHHHHHHHHTCSCTTSCTTCS
T ss_pred             ------------------------------------------------------CCCCHHHHHHHHHHhhcCHHHcCCCC
Confidence                                                                  12456899999999999999999   


Q ss_pred             --CHHHHHcCCCCCCc
Q 025467          235 --TAREALRHPFFTRD  248 (252)
Q Consensus       235 --ta~e~l~hpwf~~~  248 (252)
                        +++++++||||+..
T Consensus       268 ~~~~~~i~~h~~f~~~  283 (353)
T 2i0e_A          268 PEGERDIKEHAFFRYI  283 (353)
T ss_dssp             TTHHHHHHTSGGGTTC
T ss_pred             CCCHHHHhcCccccCC
Confidence              47999999999864

>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7

Probab=99.98  E-value=4.7e-33  Score=229.95  Aligned_cols=149  Identities=25%  Similarity=0.433  Sum_probs=118.0

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCC--CccccCCC
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ--NYIVSTRH   78 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~--~~~~~t~~   78 (252)
                      ||+|||++||+||||||+|||++..                         ....++|+|||.+.......  ....||+.
T Consensus       114 al~~lH~~givH~Dlkp~NIl~~~~-------------------------~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~  168 (321)
T 1tki_A          114 ALQFLHSHNIGHFDIRPENIIYQTR-------------------------RSSTIKIIEFGQARQLKPGDNFRLLFTAPE  168 (321)
T ss_dssp             HHHHHHHTTEECCCCCGGGEEESSS-------------------------SCCCEEECCCTTCEECCTTCEEEEEESCGG
T ss_pred             HHHHHHHCCCCcCCCCHHHEEEccC-------------------------CCCCEEEEECCCCeECCCCCccccccCChh
Confidence            6899999999999999999999541                         14567888888887654332  22468999


Q ss_pred             cccchhhhcCCCCccchhHhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHHHHHHhhcCCCCCCcc
Q 025467           79 YRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEG  158 (252)
Q Consensus        79 y~aPE~l~~~~~~~~~Diws~G~~l~~l~~g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~  158 (252)
                      |+|||++.+..++.++||||+||++|+|++|..||.+.+....+..+.......+..                       
T Consensus       169 y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~-----------------------  225 (321)
T 1tki_A          169 YYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQQIIENIMNAEYTFDEE-----------------------  225 (321)
T ss_dssp             GSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHTCCCCCHH-----------------------
T ss_pred             hcCcHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCcCCCHHHHHHHHHcCCCCCChh-----------------------
Confidence            999999998888999999999999999999999998877665555443322221110                       


Q ss_pred             ccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCCCCCHHH
Q 025467          159 AASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTARE  238 (252)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~ta~e  238 (252)
                                                                         .+...+.++.+|+.+||+.||.+|||+.|
T Consensus       226 ---------------------------------------------------~~~~~s~~~~~li~~~L~~dp~~Rpt~~e  254 (321)
T 1tki_A          226 ---------------------------------------------------AFKEISIEAMDFVDRLLVKERKSRMTASE  254 (321)
T ss_dssp             ---------------------------------------------------HHTTSCHHHHHHHHTTSCSSGGGSCCHHH
T ss_pred             ---------------------------------------------------hhccCCHHHHHHHHHHcCCChhHCcCHHH
Confidence                                                               11334568999999999999999999999


Q ss_pred             HHcCCCCCCc
Q 025467          239 ALRHPFFTRD  248 (252)
Q Consensus       239 ~l~hpwf~~~  248 (252)
                      +|+||||+..
T Consensus       255 ~l~hp~~~~~  264 (321)
T 1tki_A          255 ALQHPWLKQK  264 (321)
T ss_dssp             HHHSHHHHSC
T ss_pred             HhcChhhccC
Confidence            9999999865

>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*

Probab=99.97  E-value=8.9e-33  Score=230.27  Aligned_cols=143  Identities=28%  Similarity=0.464  Sum_probs=112.9

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCC---CCCccccCC
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERP---DQNYIVSTR   77 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~---~~~~~~~t~   77 (252)
                      ||+|||++||+||||||+|||++.                           .+.++|+|||+++....   .....+||+
T Consensus       130 aL~~LH~~~ivHrDlkp~NIll~~---------------------------~g~vkL~DFG~a~~~~~~~~~~~~~~gt~  182 (345)
T 1xjd_A          130 GLQFLHSKGIVYRDLKLDNILLDK---------------------------DGHIKIADFGMCKENMLGDAKTNTFCGTP  182 (345)
T ss_dssp             HHHHHHHTTCBCCCCCGGGEEECT---------------------------TSCEEECCCTTCBCCCCTTCCBCCCCSCG
T ss_pred             HHHHHHHCCeEeCCCChhhEEECC---------------------------CCCEEEeEChhhhhcccCCCcccCCCCCc
Confidence            689999999999999999999954                           44567777777654221   123357899


Q ss_pred             CcccchhhhcCCCCccchhHhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHHHHHHhhcCCCCCCc
Q 025467           78 HYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPE  157 (252)
Q Consensus        78 ~y~aPE~l~~~~~~~~~Diws~G~~l~~l~~g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~  157 (252)
                      .|+|||++.+..++.++|+||+||++|+|++|..||.+.+....+..+...                       ...++ 
T Consensus       183 ~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~~~-----------------------~~~~p-  238 (345)
T 1xjd_A          183 DYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIRMD-----------------------NPFYP-  238 (345)
T ss_dssp             GGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHC-----------------------CCCCC-
T ss_pred             ccCChhhhcCCCCCChhhhHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHhC-----------------------CCCCC-
Confidence            999999999989999999999999999999999999877665544433221                       11111 


Q ss_pred             cccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCCCCCHH
Q 025467          158 GAASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAR  237 (252)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~ta~  237 (252)
                                                                            ...+.++.+||.+||+.||++|||+.
T Consensus       239 ------------------------------------------------------~~~s~~~~~li~~lL~~dp~~R~~~~  264 (345)
T 1xjd_A          239 ------------------------------------------------------RWLEKEAKDLLVKLFVREPEKRLGVR  264 (345)
T ss_dssp             ------------------------------------------------------TTSCHHHHHHHHHHSCSSGGGSBTTB
T ss_pred             ------------------------------------------------------cccCHHHHHHHHHHhcCCHhHcCCCh
Confidence                                                                  12346899999999999999999998


Q ss_pred             -HHHcCCCCCCc
Q 025467          238 -EALRHPFFTRD  248 (252)
Q Consensus       238 -e~l~hpwf~~~  248 (252)
                       ++++||||+..
T Consensus       265 ~~i~~hp~f~~~  276 (345)
T 1xjd_A          265 GDIRQHPLFREI  276 (345)
T ss_dssp             SCGGGSGGGTTC
T ss_pred             HHHHcCccccCC
Confidence             99999999875

>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}

Probab=99.97  E-value=4e-32  Score=229.95  Aligned_cols=89  Identities=28%  Similarity=0.525  Sum_probs=74.9

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCC---CCCccccCC
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERP---DQNYIVSTR   77 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~---~~~~~~~t~   77 (252)
                      ||+|||++||+||||||+|||++                           ..+.++|+|||+++....   .....+||+
T Consensus       165 aL~~LH~~givHrDLKp~NILl~---------------------------~~g~ikL~DFGla~~~~~~~~~~~~~~gt~  217 (396)
T 4dc2_A          165 ALNYLHERGIIYRDLKLDNVLLD---------------------------SEGHIKLTDYGMCKEGLRPGDTTSTFCGTP  217 (396)
T ss_dssp             HHHHHHHTTCBCCCCCGGGEEEC---------------------------TTSCEEECCCTTCBCCCCTTCCBCCCCBCG
T ss_pred             HHHHHHHCCEEeccCCHHHEEEC---------------------------CCCCEEEeecceeeecccCCCccccccCCc
Confidence            68999999999999999999994                           445677777777764221   223357999


Q ss_pred             CcccchhhhcCCCCccchhHhHHHHHHHHHhCCCCCCCC
Q 025467           78 HYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTH  116 (252)
Q Consensus        78 ~y~aPE~l~~~~~~~~~Diws~G~~l~~l~~g~~pf~~~  116 (252)
                      .|+|||++.+..++.++|+||+||++|+|++|..||...
T Consensus       218 ~Y~aPE~l~~~~~~~~~DiwslGvllyell~G~~Pf~~~  256 (396)
T 4dc2_A          218 NYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIV  256 (396)
T ss_dssp             GGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSTTT
T ss_pred             ccCCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCccc
Confidence            999999999999999999999999999999999999653

>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B

Probab=99.97  E-value=3.2e-32  Score=228.48  Aligned_cols=149  Identities=30%  Similarity=0.496  Sum_probs=116.3

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCC--CccccCCC
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ--NYIVSTRH   78 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~--~~~~~t~~   78 (252)
                      ||+|||++||+||||||+|||++.++                        ....++|+|||++.......  ....||+.
T Consensus       140 al~~lH~~~ivH~Dlkp~NIll~~~~------------------------~~~~~kl~DfG~a~~~~~~~~~~~~~gt~~  195 (362)
T 2bdw_A          140 SIAYCHSNGIVHRNLKPENLLLASKA------------------------KGAAVKLADFGLAIEVNDSEAWHGFAGTPG  195 (362)
T ss_dssp             HHHHHHHTTCBCCCCSGGGEEESCSS------------------------TTCCEEECCCTTCBCCTTCCSCCCSCSCTT
T ss_pred             HHHHHHHCCeEeccCchHHEEEecCC------------------------CCCCEEEeecCcceEecCCcccccCCCCcc
Confidence            68999999999999999999995432                        23457889999887554332  23578999


Q ss_pred             cccchhhhcCCCCccchhHhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHHHHHHhhcCCCCCCcc
Q 025467           79 YRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEG  158 (252)
Q Consensus        79 y~aPE~l~~~~~~~~~Diws~G~~l~~l~~g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~  158 (252)
                      |+|||++.+..++.++||||+||++|+|++|..||.+.+.......+....                       ..++. 
T Consensus       196 y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~~~~~i~~~~-----------------------~~~~~-  251 (362)
T 2bdw_A          196 YLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGA-----------------------YDYPS-  251 (362)
T ss_dssp             TCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTC-----------------------CCCCT-
T ss_pred             ccCHHHHccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhCC-----------------------CCCCc-
Confidence            999999998889999999999999999999999998776554444332211                       11110 


Q ss_pred             ccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCCCCCHHH
Q 025467          159 AASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTARE  238 (252)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~ta~e  238 (252)
                                                                        ..+...+.++.+||.+||+.||++|||+.+
T Consensus       252 --------------------------------------------------~~~~~~~~~~~~li~~~L~~dP~~R~t~~e  281 (362)
T 2bdw_A          252 --------------------------------------------------PEWDTVTPEAKSLIDSMLTVNPKKRITADQ  281 (362)
T ss_dssp             --------------------------------------------------TGGGGSCHHHHHHHHHHSCSSGGGSCCHHH
T ss_pred             --------------------------------------------------ccccCCCHHHHHHHHHHcCCChhhCcCHHH
Confidence                                                              011334578999999999999999999999


Q ss_pred             HHcCCCCCC
Q 025467          239 ALRHPFFTR  247 (252)
Q Consensus       239 ~l~hpwf~~  247 (252)
                      +|+||||..
T Consensus       282 ~l~hp~~~~  290 (362)
T 2bdw_A          282 ALKVPWICN  290 (362)
T ss_dssp             HTTSHHHHT
T ss_pred             HhcCcccCC
Confidence            999999965

>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*

Probab=99.97  E-value=2.1e-32  Score=226.85  Aligned_cols=175  Identities=28%  Similarity=0.478  Sum_probs=126.4

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCC---CCccccCC
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD---QNYIVSTR   77 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~---~~~~~~t~   77 (252)
                      ||+|||++||+||||||+||+++.                           .+.++|+|||.+......   .....||.
T Consensus       136 ~l~~LH~~~ivH~dlkp~Nil~~~---------------------------~~~~kl~Dfg~~~~~~~~~~~~~~~~~t~  188 (331)
T 4aaa_A          136 GIGFCHSHNIIHRDIKPENILVSQ---------------------------SGVVKLCDFGFARTLAAPGEVYDDEVATR  188 (331)
T ss_dssp             HHHHHHHTTCCCCCCCGGGEEECT---------------------------TSCEEECCCTTC------------CCCCC
T ss_pred             HHHHHHHCCEEccCcChheEEEcC---------------------------CCcEEEEeCCCceeecCCccccCCCcCCc
Confidence            689999999999999999999944                           445777777777543222   12346889


Q ss_pred             CcccchhhhcC-CCCccchhHhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHHHHHHhhcCCCCCC
Q 025467           78 HYRAPEVILGL-GWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWP  156 (252)
Q Consensus        78 ~y~aPE~l~~~-~~~~~~Diws~G~~l~~l~~g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~  156 (252)
                      .|+|||++.+. .++.++||||+||++|+|++|..||.+.+..+.+..+....+..+......+......    .....+
T Consensus       189 ~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~  264 (331)
T 4aaa_A          189 WYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLYHIMMCLGNLIPRHQELFNKNPVF----AGVRLP  264 (331)
T ss_dssp             TTCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHHHHHCGGG----TTCCCC
T ss_pred             cccCcccccCCCCcchHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCChhhhhHhhhcccc----ccccCc
Confidence            99999999875 6889999999999999999999999999988888889888888776554443321110    000000


Q ss_pred             ccccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCCCCCH
Q 025467          157 EGAASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTA  236 (252)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~ta  236 (252)
                      ....                                           ...........++.+.+||.+||+.||++|||+
T Consensus       265 ~~~~-------------------------------------------~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~  301 (331)
T 4aaa_A          265 EIKE-------------------------------------------REPLERRYPKLSEVVIDLAKKCLHIDPDKRPFC  301 (331)
T ss_dssp             CCSS-------------------------------------------CCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCG
T ss_pred             cccc-------------------------------------------cchhhhcccchhHHHHHHHHHHhccCcccCCCH
Confidence            0000                                           000011123457789999999999999999999


Q ss_pred             HHHHcCCCCCCcc
Q 025467          237 REALRHPFFTRDH  249 (252)
Q Consensus       237 ~e~l~hpwf~~~~  249 (252)
                      +|+|+||||+...
T Consensus       302 ~ell~hp~f~~~~  314 (331)
T 4aaa_A          302 AELLHHDFFQMDG  314 (331)
T ss_dssp             GGGGGSHHHHGGG
T ss_pred             HHHhcCchhccCC
Confidence            9999999998653

>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7

Probab=99.97  E-value=4.3e-32  Score=229.42  Aligned_cols=150  Identities=30%  Similarity=0.552  Sum_probs=117.0

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCC--CccccCCC
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ--NYIVSTRH   78 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~--~~~~~t~~   78 (252)
                      ||+|||++||+||||||+|||++.+                         ....++|+|||++.......  ....||+.
T Consensus       161 aL~~LH~~givHrDlkp~NIll~~~-------------------------~~~~vkL~DFG~a~~~~~~~~~~~~~gt~~  215 (387)
T 1kob_A          161 GLKHMHEHSIVHLDIKPENIMCETK-------------------------KASSVKIIDFGLATKLNPDEIVKVTTATAE  215 (387)
T ss_dssp             HHHHHHHTTEECCCCCGGGEEESST-------------------------TCCCEEECCCTTCEECCTTSCEEEECSSGG
T ss_pred             HHHHHHhCCeeecccchHHeEEecC-------------------------CCCceEEEecccceecCCCcceeeeccCCC
Confidence            6899999999999999999999532                         23458888998887654332  22478999


Q ss_pred             cccchhhhcCCCCccchhHhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHHHHHHhhcCCCCCCcc
Q 025467           79 YRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEG  158 (252)
Q Consensus        79 y~aPE~l~~~~~~~~~Diws~G~~l~~l~~g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~  158 (252)
                      |+|||++.+..++.++||||+||++|+|++|..||.+.+....+..+....-.                       .+. 
T Consensus       216 y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~~~~~i~~~~~~-----------------------~~~-  271 (387)
T 1kob_A          216 FAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLETLQNVKRCDWE-----------------------FDE-  271 (387)
T ss_dssp             GCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHHCCCC-----------------------CCS-
T ss_pred             ccCchhccCCCCCCcccEeeHhHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCC-----------------------CCc-
Confidence            99999999888999999999999999999999999887665544433221100                       000 


Q ss_pred             ccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCCCCCHHH
Q 025467          159 AASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTARE  238 (252)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~ta~e  238 (252)
                                                                        ......+.++.+||.+||+.||.+|||+.|
T Consensus       272 --------------------------------------------------~~~~~~s~~~~~li~~~L~~dP~~Rpt~~e  301 (387)
T 1kob_A          272 --------------------------------------------------DAFSSVSPEAKDFIKNLLQKEPRKRLTVHD  301 (387)
T ss_dssp             --------------------------------------------------STTTTSCHHHHHHHHTTSCSSGGGSCCHHH
T ss_pred             --------------------------------------------------cccccCCHHHHHHHHHHcCCChhHCcCHHH
Confidence                                                              011234578999999999999999999999


Q ss_pred             HHcCCCCCCcc
Q 025467          239 ALRHPFFTRDH  249 (252)
Q Consensus       239 ~l~hpwf~~~~  249 (252)
                      +|+||||+...
T Consensus       302 ll~hp~~~~~~  312 (387)
T 1kob_A          302 ALEHPWLKGDH  312 (387)
T ss_dssp             HHTSTTTSSCC
T ss_pred             HhhCccccCCc
Confidence            99999998753

>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*

Probab=99.97  E-value=6.1e-32  Score=232.81  Aligned_cols=143  Identities=28%  Similarity=0.479  Sum_probs=112.7

Q ss_pred             Chhhhhc-cCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCC---CCccccC
Q 025467            1 MFAVMHD-LCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD---QNYIVST   76 (252)
Q Consensus         1 aL~~lH~-~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~---~~~~~~t   76 (252)
                      ||+|||+ .||+||||||+|||++.                           .+.++|+|||++......   ....+||
T Consensus       260 aL~~LH~~~giiHrDlkp~NIll~~---------------------------~~~~kl~DFG~a~~~~~~~~~~~~~~gt  312 (446)
T 4ejn_A          260 ALDYLHSEKNVVYRDLKLENLMLDK---------------------------DGHIKITDFGLCKEGIKDGATMKTFCGT  312 (446)
T ss_dssp             HHHHHHHHTCCCCCCCCGGGEEECS---------------------------SSCEEECCCCCCCTTCC-----CCSSSC
T ss_pred             HHHHHhhcCCEEECCCCHHHEEECC---------------------------CCCEEEccCCCceeccCCCcccccccCC
Confidence            6899998 99999999999999954                           445777777777543221   2235789


Q ss_pred             CCcccchhhhcCCCCccchhHhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHHHHHHhhcCCCCCC
Q 025467           77 RHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWP  156 (252)
Q Consensus        77 ~~y~aPE~l~~~~~~~~~Diws~G~~l~~l~~g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~  156 (252)
                      +.|+|||++.+..++.++||||+||++|+|++|..||.+.+.......+....                       ...+
T Consensus       313 ~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~~~~-----------------------~~~p  369 (446)
T 4ejn_A          313 PEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEE-----------------------IRFP  369 (446)
T ss_dssp             GGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCC-----------------------CCCC
T ss_pred             ccccCHhhcCCCCCCCccchhhhHHHHHHHhhCCCCCCCCCHHHHHHHHHhCC-----------------------CCCC
Confidence            99999999999999999999999999999999999998776554444332211                       1111


Q ss_pred             ccccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCCCC--
Q 025467          157 EGAASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRL--  234 (252)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~--  234 (252)
                                                                             ...++++.+||.+||+.||.+||  
T Consensus       370 -------------------------------------------------------~~~~~~~~~li~~~L~~dP~~R~~~  394 (446)
T 4ejn_A          370 -------------------------------------------------------RTLGPEAKSLLSGLLKKDPKQRLGG  394 (446)
T ss_dssp             -------------------------------------------------------TTSCHHHHHHHHHHTCSSTTTSTTC
T ss_pred             -------------------------------------------------------ccCCHHHHHHHHHHcccCHHHhCCC
Confidence                                                                   12346899999999999999999  


Q ss_pred             ---CHHHHHcCCCCCCc
Q 025467          235 ---TAREALRHPFFTRD  248 (252)
Q Consensus       235 ---ta~e~l~hpwf~~~  248 (252)
                         |++|+++||||+..
T Consensus       395 ~~~t~~ell~hp~f~~~  411 (446)
T 4ejn_A          395 GSEDAKEIMQHRFFAGI  411 (446)
T ss_dssp             STTTHHHHHTSGGGTTC
T ss_pred             CCCCHHHHHhCccccCC
Confidence               99999999999875

>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*

Probab=99.97  E-value=9.2e-32  Score=222.76  Aligned_cols=143  Identities=29%  Similarity=0.501  Sum_probs=110.2

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCC---CCccccCC
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD---QNYIVSTR   77 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~---~~~~~~t~   77 (252)
                      ||+|||++||+||||||+|||++.                           .+.++|+|||++......   ....+||+
T Consensus       133 al~~lH~~~ivH~Dlkp~Nill~~---------------------------~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~  185 (327)
T 3a62_A          133 ALGHLHQKGIIYRDLKPENIMLNH---------------------------QGHVKLTDFGLCKESIHDGTVTHTFCGTI  185 (327)
T ss_dssp             HHHHHHHTTCCCCCCCTTTEEECT---------------------------TSCEEECCCSCC----------CTTSSCC
T ss_pred             HHHHHHhCCEEcccCCHHHeEECC---------------------------CCcEEEEeCCcccccccCCccccccCCCc
Confidence            689999999999999999999954                           445677777776542211   22347899


Q ss_pred             CcccchhhhcCCCCccchhHhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHHHHHHhhcCCCCCCc
Q 025467           78 HYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPE  157 (252)
Q Consensus        78 ~y~aPE~l~~~~~~~~~Diws~G~~l~~l~~g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~  157 (252)
                      .|+|||++.+..++.++||||+||++|+|++|..||.+.+....+..+....                       ...+ 
T Consensus       186 ~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~-----------------------~~~p-  241 (327)
T 3a62_A          186 EYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKILKCK-----------------------LNLP-  241 (327)
T ss_dssp             TTSCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHTC-----------------------CCCC-
T ss_pred             CccCHhhCcCCCCCCcccchhHHHHHHHHHHCCCCCCCCCHHHHHHHHHhCC-----------------------CCCC-
Confidence            9999999998889999999999999999999999998776655444433211                       1111 


Q ss_pred             cccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCCCC---
Q 025467          158 GAASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRL---  234 (252)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~---  234 (252)
                                                                            ...+.++.+||.+||+.||++||   
T Consensus       242 ------------------------------------------------------~~~~~~~~~li~~~L~~dp~~R~~~~  267 (327)
T 3a62_A          242 ------------------------------------------------------PYLTQEARDLLKKLLKRNAASRLGAG  267 (327)
T ss_dssp             ------------------------------------------------------TTSCHHHHHHHHHHSCSCGGGSTTSS
T ss_pred             ------------------------------------------------------CCCCHHHHHHHHHHHhcCHhhccCCC
Confidence                                                                  12346889999999999999999   


Q ss_pred             --CHHHHHcCCCCCCc
Q 025467          235 --TAREALRHPFFTRD  248 (252)
Q Consensus       235 --ta~e~l~hpwf~~~  248 (252)
                        |++|+++||||+..
T Consensus       268 ~~~~~e~l~hp~f~~~  283 (327)
T 3a62_A          268 PGDAGEVQAHPFFRHI  283 (327)
T ss_dssp             TTTHHHHHHSGGGSSC
T ss_pred             CCCHHHHHcCCcccCC
Confidence              89999999999864

>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B

Probab=99.97  E-value=7.7e-32  Score=222.72  Aligned_cols=172  Identities=31%  Similarity=0.517  Sum_probs=124.9

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCC--CCccccCCC
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD--QNYIVSTRH   78 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~--~~~~~~t~~   78 (252)
                      ||+|||++||+||||||+||+++.+                           +.++|+|||.+......  .....||..
T Consensus       132 ~l~~lH~~gi~H~dlkp~Nili~~~---------------------------~~~kl~Dfg~~~~~~~~~~~~~~~~~~~  184 (326)
T 1blx_A          132 GLDFLHSHRVVHRDLKPQNILVTSS---------------------------GQIKLADFGLARIYSFQMALTSVVVTLW  184 (326)
T ss_dssp             HHHHHHHTTCCCCCCCGGGEEECTT---------------------------CCEEECSCCSCCCCCGGGGGCCCCCCCT
T ss_pred             HHHHHHHCCceeccCCHHHeEEcCC---------------------------CCEEEecCcccccccCCCCccccccccc
Confidence            6899999999999999999999544                           45677777766543221  122467899


Q ss_pred             cccchhhhcCCCCccchhHhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHHHHHHhhcCCCCCCcc
Q 025467           79 YRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEG  158 (252)
Q Consensus        79 y~aPE~l~~~~~~~~~Diws~G~~l~~l~~g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~  158 (252)
                      |+|||++.+..++.++||||+||++|++++|..||.+....+.+..+....+.++...+..            ....+..
T Consensus       185 y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~------------~~~~~~~  252 (326)
T 1blx_A          185 YRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPR------------DVALPRQ  252 (326)
T ss_dssp             TCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCGGGSCT------------TCSSCGG
T ss_pred             eeCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHcCCCCcccCcc------------ccccchh
Confidence            9999999988899999999999999999999999999888888888887777654321100            0000000


Q ss_pred             ccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCCCCCHHH
Q 025467          159 AASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTARE  238 (252)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~ta~e  238 (252)
                           ..                     ..             .............+..+.+||.+||+.||.+|||+.+
T Consensus       253 -----~~---------------------~~-------------~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e  293 (326)
T 1blx_A          253 -----AF---------------------HS-------------KSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYS  293 (326)
T ss_dssp             -----GS---------------------CC-------------CCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTSCCHHH
T ss_pred             -----hh---------------------cc-------------cCcchhhhccccCCHHHHHHHHHHcCCCcccCCCHHH
Confidence                 00                     00             0000011223456778999999999999999999999


Q ss_pred             HHcCCCCCCccc
Q 025467          239 ALRHPFFTRDHL  250 (252)
Q Consensus       239 ~l~hpwf~~~~~  250 (252)
                      +++||||++...
T Consensus       294 ~l~hp~~~~~~~  305 (326)
T 1blx_A          294 ALSHPYFQDLER  305 (326)
T ss_dssp             HHTSGGGTTCCC
T ss_pred             HhcCccccccch
Confidence            999999987643

>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*

Probab=99.97  E-value=7.3e-32  Score=224.87  Aligned_cols=88  Identities=30%  Similarity=0.547  Sum_probs=73.1

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCC---CCCccccCC
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERP---DQNYIVSTR   77 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~---~~~~~~~t~   77 (252)
                      ||+|||++||+||||||+|||++.                           .+.++|+|||+++....   .....+||+
T Consensus       122 aL~~LH~~~ivHrDlkp~NIll~~---------------------------~g~~kL~DFG~a~~~~~~~~~~~~~~gt~  174 (345)
T 3a8x_A          122 ALNYLHERGIIYRDLKLDNVLLDS---------------------------EGHIKLTDYGMCKEGLRPGDTTSTFCGTP  174 (345)
T ss_dssp             HHHHHHHTTCBCCCCCGGGEEECT---------------------------TSCEEECCGGGCBCSCCTTCCBCCCCSCG
T ss_pred             HHHHHHHCCceecCCCHHHEEECC---------------------------CCCEEEEeccccccccCCCCcccccCCCc
Confidence            689999999999999999999954                           44566777776654221   122357899


Q ss_pred             CcccchhhhcCCCCccchhHhHHHHHHHHHhCCCCCCC
Q 025467           78 HYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQT  115 (252)
Q Consensus        78 ~y~aPE~l~~~~~~~~~Diws~G~~l~~l~~g~~pf~~  115 (252)
                      .|+|||++.+..++.++|+||+||++|+|++|..||..
T Consensus       175 ~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~  212 (345)
T 3a8x_A          175 NYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDI  212 (345)
T ss_dssp             GGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTT
T ss_pred             cccCccccCCCCCChHHhHHHHHHHHHHHHhCCCCcCC
Confidence            99999999998999999999999999999999999965

>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}

Probab=99.97  E-value=4e-32  Score=228.76  Aligned_cols=150  Identities=30%  Similarity=0.478  Sum_probs=117.5

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCC--CccccCCC
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ--NYIVSTRH   78 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~--~~~~~t~~   78 (252)
                      ||+|||++||+||||||+|||+..+                         ....++|+|||++.......  ....||+.
T Consensus       199 aL~~LH~~~ivH~Dlkp~NIll~~~-------------------------~~~~~kl~DFG~a~~~~~~~~~~~~~gt~~  253 (373)
T 2x4f_A          199 GIRHMHQMYILHLDLKPENILCVNR-------------------------DAKQIKIIDFGLARRYKPREKLKVNFGTPE  253 (373)
T ss_dssp             HHHHHHHTTEECCCCCGGGEEEEET-------------------------TTTEEEECCCSSCEECCTTCBCCCCCSSCT
T ss_pred             HHHHHHHCCcccccCCHHHEEEecC-------------------------CCCcEEEEeCCCceecCCccccccccCCCc
Confidence            6899999999999999999998532                         23457888888886543332  23468999


Q ss_pred             cccchhhhcCCCCccchhHhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHHHHHHhhcCCCCCCcc
Q 025467           79 YRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEG  158 (252)
Q Consensus        79 y~aPE~l~~~~~~~~~Diws~G~~l~~l~~g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~  158 (252)
                      |+|||++.+..++.++||||+||++|+|++|..||.+.+..+.+..+......++.                        
T Consensus       254 y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~------------------------  309 (373)
T 2x4f_A          254 FLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDNDAETLNNILACRWDLED------------------------  309 (373)
T ss_dssp             TCCHHHHTTCBCCHHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHTCCCSCS------------------------
T ss_pred             EeChhhccCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCCCCh------------------------
Confidence            99999998888999999999999999999999999887766655544332111110                        


Q ss_pred             ccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCCCCCHHH
Q 025467          159 AASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTARE  238 (252)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~ta~e  238 (252)
                                                                        ......++++.+||.+||+.||.+|||+.|
T Consensus       310 --------------------------------------------------~~~~~~~~~~~~li~~~L~~dp~~Rps~~e  339 (373)
T 2x4f_A          310 --------------------------------------------------EEFQDISEEAKEFISKLLIKEKSWRISASE  339 (373)
T ss_dssp             --------------------------------------------------GGGTTSCHHHHHHHHTTSCSSGGGSCCHHH
T ss_pred             --------------------------------------------------hhhccCCHHHHHHHHHHcCCChhhCCCHHH
Confidence                                                              001234578999999999999999999999


Q ss_pred             HHcCCCCCCcc
Q 025467          239 ALRHPFFTRDH  249 (252)
Q Consensus       239 ~l~hpwf~~~~  249 (252)
                      +|+||||++.+
T Consensus       340 ~l~hp~~~~~~  350 (373)
T 2x4f_A          340 ALKHPWLSDHK  350 (373)
T ss_dssp             HHHSHHHHCHH
T ss_pred             HhcCcCcCCCc
Confidence            99999998753

>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A

Probab=99.97  E-value=9.6e-32  Score=241.82  Aligned_cols=143  Identities=26%  Similarity=0.407  Sum_probs=115.0

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCC---CCCccccCC
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERP---DQNYIVSTR   77 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~---~~~~~~~t~   77 (252)
                      ||+|||++||+||||||+|||++                           ..+.+||+|||+++....   .....+||+
T Consensus       454 aL~~LH~~gIiHrDLKp~NILl~---------------------------~~g~ikL~DFGla~~~~~~~~~~~~~~GT~  506 (674)
T 3pfq_A          454 GLFFLQSKGIIYRDLKLDNVMLD---------------------------SEGHIKIADFGMCKENIWDGVTTKTFCGTP  506 (674)
T ss_dssp             HHHHHHHTSEECCCCCSTTEEEC---------------------------SSSCEEECCCTTCEECCCTTCCBCCCCSCS
T ss_pred             HHHHHHhCCeEeccCChhhEEEc---------------------------CCCcEEEeecceeeccccCCcccccccCCC
Confidence            68999999999999999999994                           445677788887764221   123357999


Q ss_pred             CcccchhhhcCCCCccchhHhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHHHHHHhhcCCCCCCc
Q 025467           78 HYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPE  157 (252)
Q Consensus        78 ~y~aPE~l~~~~~~~~~Diws~G~~l~~l~~g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~  157 (252)
                      .|+|||++.+..|+.++||||+||++|+|++|..||.+.+..+.+..+....                       ..+| 
T Consensus       507 ~Y~APE~l~~~~~~~~~DvwSlGvilyelltG~~Pf~~~~~~~~~~~i~~~~-----------------------~~~p-  562 (674)
T 3pfq_A          507 DYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHN-----------------------VAYP-  562 (674)
T ss_dssp             SSCCHHHHTCCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHSSC-----------------------CCCC-
T ss_pred             cccCHhhhcCCCCCccceEechHHHHHHHHcCCCCCCCCCHHHHHHHHHhCC-----------------------CCCC-
Confidence            9999999999999999999999999999999999999877665554443211                       1111 


Q ss_pred             cccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCCCCCH-
Q 025467          158 GAASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTA-  236 (252)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~ta-  236 (252)
                                                                            ...+.++.+||.+||+.||++|+++ 
T Consensus       563 ------------------------------------------------------~~~s~~~~~li~~lL~~dP~~R~~~~  588 (674)
T 3pfq_A          563 ------------------------------------------------------KSMSKEAVAICKGLMTKHPGKRLGCG  588 (674)
T ss_dssp             ------------------------------------------------------TTSCHHHHHHHHHHSCSSSTTCTTCS
T ss_pred             ------------------------------------------------------ccCCHHHHHHHHHHccCCHHHCCCCC
Confidence                                                                  2245689999999999999999997 


Q ss_pred             ----HHHHcCCCCCCc
Q 025467          237 ----REALRHPFFTRD  248 (252)
Q Consensus       237 ----~e~l~hpwf~~~  248 (252)
                          +||++||||+..
T Consensus       589 ~~~~~ei~~h~ff~~i  604 (674)
T 3pfq_A          589 PEGERDIKEHAFFRYI  604 (674)
T ss_dssp             TTHHHHHHSSGGGSSC
T ss_pred             CCcHHHHhcCccccCC
Confidence                999999999874

>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A

Probab=99.97  E-value=2.3e-31  Score=219.74  Aligned_cols=151  Identities=30%  Similarity=0.428  Sum_probs=117.0

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCC--CccccCCC
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ--NYIVSTRH   78 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~--~~~~~t~~   78 (252)
                      ||+|||++||+||||||+||++..++                       .....++|+|||.+.......  ....||+.
T Consensus       127 aL~~lH~~~ivH~dikp~NIl~~~~~-----------------------~~~~~~kl~Dfg~~~~~~~~~~~~~~~gt~~  183 (321)
T 2a2a_A          127 GVNYLHTKKIAHFDLKPENIMLLDKN-----------------------IPIPHIKLIDFGLAHEIEDGVEFKNIFGTPE  183 (321)
T ss_dssp             HHHHHHHTTEECCCCSGGGEEESCTT-----------------------SSSCCEEECCCTTCEECCTTCCCCCCCSCGG
T ss_pred             HHHHHHhCCeecCCCChHHEEEecCC-----------------------CCcCCEEEccCccceecCccccccccCCCCC
Confidence            68999999999999999999995543                       112257888888886544322  23468999


Q ss_pred             cccchhhhcCCCCccchhHhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHHHHHHhhcCCCCCCcc
Q 025467           79 YRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEG  158 (252)
Q Consensus        79 y~aPE~l~~~~~~~~~Diws~G~~l~~l~~g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~  158 (252)
                      |+|||++.+..++.++||||+||++|+|++|..||.+....+.+..+.......+...                      
T Consensus       184 y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~----------------------  241 (321)
T 2a2a_A          184 FVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITSVSYDFDEEF----------------------  241 (321)
T ss_dssp             GCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHTTCCCCCHHH----------------------
T ss_pred             ccCcccccCCCCCCccccHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcccccChhh----------------------
Confidence            9999999988899999999999999999999999987766555444332221111110                      


Q ss_pred             ccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCCCCCHHH
Q 025467          159 AASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTARE  238 (252)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~ta~e  238 (252)
                                                                          ....+..+.+||.+||+.||++|||+.|
T Consensus       242 ----------------------------------------------------~~~~~~~~~~li~~~l~~dp~~Rps~~e  269 (321)
T 2a2a_A          242 ----------------------------------------------------FSHTSELAKDFIRKLLVKETRKRLTIQE  269 (321)
T ss_dssp             ----------------------------------------------------HTTCCHHHHHHHHTTSCSSTTTSCCHHH
T ss_pred             ----------------------------------------------------hcccCHHHHHHHHHHcCCChhhCcCHHH
Confidence                                                                1234568899999999999999999999


Q ss_pred             HHcCCCCCCc
Q 025467          239 ALRHPFFTRD  248 (252)
Q Consensus       239 ~l~hpwf~~~  248 (252)
                      +++||||+..
T Consensus       270 ~l~hp~~~~~  279 (321)
T 2a2a_A          270 ALRHPWITPV  279 (321)
T ss_dssp             HHHSTTTSCS
T ss_pred             HhcCccccCC
Confidence            9999999864

>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}

Probab=99.97  E-value=5.9e-32  Score=220.95  Aligned_cols=144  Identities=26%  Similarity=0.436  Sum_probs=107.8

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCC---CccccCC
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ---NYIVSTR   77 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~---~~~~~t~   77 (252)
                      ||+|||++||+||||||+|||++.                           .+.++|+|||.+.......   ....||+
T Consensus       149 ~l~~lH~~~ivH~Dlkp~Nil~~~---------------------------~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~  201 (298)
T 2zv2_A          149 GIEYLHYQKIIHRDIKPSNLLVGE---------------------------DGHIKIADFGVSNEFKGSDALLSNTVGTP  201 (298)
T ss_dssp             HHHHHHHTTEECCCCCGGGEEECT---------------------------TSCEEECCCTTCEECSSSSCEECCCCSCG
T ss_pred             HHHHHHHCCeeccCCCHHHEEECC---------------------------CCCEEEecCCCccccccccccccCCcCCc
Confidence            689999999999999999999954                           4456777777775433221   2347899


Q ss_pred             CcccchhhhcCC---CCccchhHhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHHHHHHhhcCCCC
Q 025467           78 HYRAPEVILGLG---WTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLD  154 (252)
Q Consensus        78 ~y~aPE~l~~~~---~~~~~Diws~G~~l~~l~~g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~  154 (252)
                      .|+|||++.+..   ++.++||||+||++|+|++|..||...........+..                       ....
T Consensus       202 ~y~aPE~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~-----------------------~~~~  258 (298)
T 2zv2_A          202 AFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDERIMCLHSKIKS-----------------------QALE  258 (298)
T ss_dssp             GGCCGGGCCTTCCCEESHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHH-----------------------CCCC
T ss_pred             cccChhhhccCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCccHHHHHHHHhc-----------------------ccCC
Confidence            999999997654   36789999999999999999999986554332222111                       1111


Q ss_pred             CCccccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCCCC
Q 025467          155 WPEGAASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRL  234 (252)
Q Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~  234 (252)
                      .+.                                                     ....++++.+||.+||+.||++||
T Consensus       259 ~~~-----------------------------------------------------~~~~~~~l~~li~~~l~~dp~~R~  285 (298)
T 2zv2_A          259 FPD-----------------------------------------------------QPDIAEDLKDLITRMLDKNPESRI  285 (298)
T ss_dssp             CCS-----------------------------------------------------SSCCCHHHHHHHHHHTCSCTTTSC
T ss_pred             CCC-----------------------------------------------------ccccCHHHHHHHHHHhhcChhhCC
Confidence            110                                                     123456899999999999999999


Q ss_pred             CHHHHHcCCCCCC
Q 025467          235 TAREALRHPFFTR  247 (252)
Q Consensus       235 ta~e~l~hpwf~~  247 (252)
                      |++|+++||||++
T Consensus       286 s~~e~l~hp~~~~  298 (298)
T 2zv2_A          286 VVPEIKLHPWVTR  298 (298)
T ss_dssp             CHHHHTTCHHHHC
T ss_pred             CHHHHhcCccccC
Confidence            9999999999963

>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*

Probab=99.97  E-value=7.1e-32  Score=229.46  Aligned_cols=148  Identities=29%  Similarity=0.510  Sum_probs=114.6

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCC----CccccC
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ----NYIVST   76 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~----~~~~~t   76 (252)
                      ||+|||++||+||||||+|||++                           ..+.+||+|||+++......    ...+||
T Consensus       180 aL~~LH~~givHrDLKp~NILl~---------------------------~~g~ikL~DFG~a~~~~~~~~~~~~~~~gt  232 (410)
T 3v8s_A          180 ALDAIHSMGFIHRDVKPDNMLLD---------------------------KSGHLKLADFGTCMKMNKEGMVRCDTAVGT  232 (410)
T ss_dssp             HHHHHHHTTEECCCCSGGGEEEC---------------------------TTSCEEECCCTTCEECCTTSEEECCSCCSC
T ss_pred             HHHHHHHCCeEeccCCHHHeeEC---------------------------CCCCEEEeccceeEeeccCCcccccCCcCC
Confidence            68999999999999999999994                           44567777777775543321    235799


Q ss_pred             CCcccchhhhcCC----CCccchhHhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHHHHHHhhcCC
Q 025467           77 RHYRAPEVILGLG----WTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGR  152 (252)
Q Consensus        77 ~~y~aPE~l~~~~----~~~~~Diws~G~~l~~l~~g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~  152 (252)
                      +.|+|||++.+..    ++.++||||+||++|+|++|..||.+.+.......+......                     
T Consensus       233 ~~Y~APE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~---------------------  291 (410)
T 3v8s_A          233 PDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHKNS---------------------  291 (410)
T ss_dssp             GGGCCHHHHHTTTTTCEEETHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTHHHH---------------------
T ss_pred             ccccCHHHhhccCCCcCCCCcceEecchHHHHHHHhCCCCCCCCChhhHHHHHHhcccc---------------------
Confidence            9999999998765    789999999999999999999999887765555444321100                     


Q ss_pred             CCCCccccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCC
Q 025467          153 LDWPEGAASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTD  232 (252)
Q Consensus       153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~  232 (252)
                      +.+|                                                     .....+.++++||.+||+.+|.+
T Consensus       292 ~~~p-----------------------------------------------------~~~~~s~~~~~li~~lL~~~~~r  318 (410)
T 3v8s_A          292 LTFP-----------------------------------------------------DDNDISKEAKNLICAFLTDREVR  318 (410)
T ss_dssp             CCCC-----------------------------------------------------TTCCCCHHHHHHHHHHSSCGGGC
T ss_pred             ccCC-----------------------------------------------------CcccccHHHHHHHHHHccChhhh
Confidence            0111                                                     01235678999999999999988


Q ss_pred             --CCCHHHHHcCCCCCCcc
Q 025467          233 --RLTAREALRHPFFTRDH  249 (252)
Q Consensus       233 --R~ta~e~l~hpwf~~~~  249 (252)
                        |+|++|+++||||+...
T Consensus       319 lgR~~~~ei~~Hp~f~~~~  337 (410)
T 3v8s_A          319 LGRNGVEEIKRHLFFKNDQ  337 (410)
T ss_dssp             TTSSCHHHHHTSGGGCCSS
T ss_pred             CCCCCHHHHhcCccccCCC
Confidence              99999999999998753

>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*

Probab=99.97  E-value=1.2e-31  Score=221.44  Aligned_cols=147  Identities=29%  Similarity=0.494  Sum_probs=112.3

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCC---CCccccCC
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD---QNYIVSTR   77 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~---~~~~~~t~   77 (252)
                      ||+|||++||+||||||+||+++.                           .+.++|+|||.+......   .....||+
T Consensus       153 ~L~~LH~~~ivH~Dlkp~NIll~~---------------------------~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~  205 (321)
T 2c30_A          153 ALAYLHAQGVIHRDIKSDSILLTL---------------------------DGRVKLSDFGFCAQISKDVPKRKSLVGTP  205 (321)
T ss_dssp             HHHHHHHTTEECCCCSGGGEEECT---------------------------TCCEEECCCTTCEECCSSSCCBCCCCSCG
T ss_pred             HHHHHHHCCeecCCCCHHHEEECC---------------------------CCcEEEeeeeeeeecccCccccccccCCc
Confidence            589999999999999999999954                           445677777776543322   12347899


Q ss_pred             CcccchhhhcCCCCccchhHhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHHHHHHhhcCCCCCCc
Q 025467           78 HYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPE  157 (252)
Q Consensus        78 ~y~aPE~l~~~~~~~~~Diws~G~~l~~l~~g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~  157 (252)
                      .|+|||++.+..++.++||||+||++|+|++|..||.+.........+....  .|                    ..  
T Consensus       206 ~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~--~~--------------------~~--  261 (321)
T 2c30_A          206 YWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPPYFSDSPVQAMKRLRDSP--PP--------------------KL--  261 (321)
T ss_dssp             GGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSS--CC--------------------CC--
T ss_pred             cccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCC--CC--------------------Cc--
Confidence            9999999998889999999999999999999999998766544433222110  00                    00  


Q ss_pred             cccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCCCCCHH
Q 025467          158 GAASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAR  237 (252)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~ta~  237 (252)
                                                                         ......+..+.+||.+||+.||++|||++
T Consensus       262 ---------------------------------------------------~~~~~~~~~l~~li~~~l~~dp~~Rps~~  290 (321)
T 2c30_A          262 ---------------------------------------------------KNSHKVSPVLRDFLERMLVRDPQERATAQ  290 (321)
T ss_dssp             ---------------------------------------------------TTGGGSCHHHHHHHHHHSCSSTTTSCCHH
T ss_pred             ---------------------------------------------------CccccCCHHHHHHHHHHccCChhhCcCHH
Confidence                                                               00122456889999999999999999999


Q ss_pred             HHHcCCCCCCcc
Q 025467          238 EALRHPFFTRDH  249 (252)
Q Consensus       238 e~l~hpwf~~~~  249 (252)
                      ++++||||....
T Consensus       291 ell~hp~~~~~~  302 (321)
T 2c30_A          291 ELLDHPFLLQTG  302 (321)
T ss_dssp             HHHTSGGGGGCC
T ss_pred             HHhcChhhccCC
Confidence            999999998654

>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A

Probab=99.97  E-value=4.8e-32  Score=226.55  Aligned_cols=149  Identities=30%  Similarity=0.435  Sum_probs=113.1

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCC---CccccCC
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ---NYIVSTR   77 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~---~~~~~t~   77 (252)
                      ||+|||++||+||||||+|||++.++                        ....++|+|||.+.......   ...+||+
T Consensus       142 al~~lH~~~ivHrDlkp~NIl~~~~~------------------------~~~~vkl~Dfg~a~~~~~~~~~~~~~~gt~  197 (351)
T 3c0i_A          142 ALRYCHDNNIIHRDVKPHCVLLASKE------------------------NSAPVKLGGFGVAIQLGESGLVAGGRVGTP  197 (351)
T ss_dssp             HHHHHHHTTEECSCCSGGGEEECSSS------------------------TTCCEEECCCTTCEECCTTSCBCCCCCSCG
T ss_pred             HHHHHHHCCceeccCChHHeEEecCC------------------------CCCcEEEecCcceeEecCCCeeecCCcCCc
Confidence            68999999999999999999996432                        23347888998886544322   2347899


Q ss_pred             CcccchhhhcCCCCccchhHhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHHHHHHhhcCCCCCCc
Q 025467           78 HYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPE  157 (252)
Q Consensus        78 ~y~aPE~l~~~~~~~~~Diws~G~~l~~l~~g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~  157 (252)
                      .|+|||++.+..++.++||||+||++|+|++|..||.+.. ......+.......+                        
T Consensus       198 ~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~-~~~~~~i~~~~~~~~------------------------  252 (351)
T 3c0i_A          198 HFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTK-ERLFEGIIKGKYKMN------------------------  252 (351)
T ss_dssp             GGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCSSH-HHHHHHHHHTCCCCC------------------------
T ss_pred             CccCHHHHcCCCCCchHhhHHHHHHHHHHHHCCCCCCCcH-HHHHHHHHcCCCCCC------------------------
Confidence            9999999998889999999999999999999999997642 222222211100000                        


Q ss_pred             cccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCCCCCHH
Q 025467          158 GAASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAR  237 (252)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~ta~  237 (252)
                                                                        ...+...+.++.+||.+||+.||++|||+.
T Consensus       253 --------------------------------------------------~~~~~~~s~~~~~li~~~L~~dP~~R~s~~  282 (351)
T 3c0i_A          253 --------------------------------------------------PRQWSHISESAKDLVRRMLMLDPAERITVY  282 (351)
T ss_dssp             --------------------------------------------------HHHHTTSCHHHHHHHHHHTCSSTTTSCCHH
T ss_pred             --------------------------------------------------ccccccCCHHHHHHHHHHCCCChhHCcCHH
Confidence                                                              001123456899999999999999999999


Q ss_pred             HHHcCCCCCCc
Q 025467          238 EALRHPFFTRD  248 (252)
Q Consensus       238 e~l~hpwf~~~  248 (252)
                      |+|+||||+..
T Consensus       283 e~l~hp~~~~~  293 (351)
T 3c0i_A          283 EALNHPWLKER  293 (351)
T ss_dssp             HHHTSHHHHTH
T ss_pred             HHhcChhhcCC
Confidence            99999999764

>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*

Probab=99.97  E-value=1.5e-31  Score=225.07  Aligned_cols=143  Identities=31%  Similarity=0.454  Sum_probs=112.9

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCC---CCCccccCC
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERP---DQNYIVSTR   77 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~---~~~~~~~t~   77 (252)
                      ||+|||++||+||||||+|||++.                           .+.++|+|||+++....   .....+||+
T Consensus       151 aL~~LH~~givHrDlkp~NIll~~---------------------------~g~ikL~DFG~a~~~~~~~~~~~~~~gt~  203 (373)
T 2r5t_A          151 ALGYLHSLNIVYRDLKPENILLDS---------------------------QGHIVLTDFGLCKENIEHNSTTSTFCGTP  203 (373)
T ss_dssp             HHHHHHHTTCCCCCCCGGGEEECT---------------------------TSCEEECCCCBCGGGBCCCCCCCSBSCCC
T ss_pred             HHHHHHHCCceecCCCHHHEEECC---------------------------CCCEEEeeCccccccccCCCccccccCCc
Confidence            689999999999999999999944                           44677777777764211   223457999


Q ss_pred             CcccchhhhcCCCCccchhHhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHHHHHHhhcCCCCCCc
Q 025467           78 HYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPE  157 (252)
Q Consensus        78 ~y~aPE~l~~~~~~~~~Diws~G~~l~~l~~g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~  157 (252)
                      .|+|||++.+..++.++|+||+||++|+|++|..||.+.+..+....+...                       ...++ 
T Consensus       204 ~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~~~~~i~~~-----------------------~~~~~-  259 (373)
T 2r5t_A          204 EYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNILNK-----------------------PLQLK-  259 (373)
T ss_dssp             CCCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSBHHHHHHHHHHS-----------------------CCCCC-
T ss_pred             cccCHHHhCCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhc-----------------------ccCCC-
Confidence            999999999989999999999999999999999999877655544433221                       01111 


Q ss_pred             cccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCCCCCH-
Q 025467          158 GAASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTA-  236 (252)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~ta-  236 (252)
                                                                            ...+.++.+||.+||+.||.+|+++ 
T Consensus       260 ------------------------------------------------------~~~~~~~~~li~~lL~~dp~~R~~~~  285 (373)
T 2r5t_A          260 ------------------------------------------------------PNITNSARHLLEGLLQKDRTKRLGAK  285 (373)
T ss_dssp             ------------------------------------------------------SSSCHHHHHHHHHHTCSSGGGSTTTT
T ss_pred             ------------------------------------------------------CCCCHHHHHHHHHHcccCHHhCCCCC
Confidence                                                                  2245689999999999999999996 


Q ss_pred             ---HHHHcCCCCCCc
Q 025467          237 ---REALRHPFFTRD  248 (252)
Q Consensus       237 ---~e~l~hpwf~~~  248 (252)
                         .++++||||+..
T Consensus       286 ~~~~~i~~h~~f~~~  300 (373)
T 2r5t_A          286 DDFMEIKSHVFFSLI  300 (373)
T ss_dssp             TTHHHHHTSGGGTTC
T ss_pred             CCHHHHhCCccccCC
Confidence               699999999864

>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*

Probab=99.97  E-value=1.1e-31  Score=222.16  Aligned_cols=152  Identities=28%  Similarity=0.358  Sum_probs=116.0

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCC--CccccCCC
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ--NYIVSTRH   78 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~--~~~~~t~~   78 (252)
                      ||+|||++||+||||||+|||++..                        ...+.++|+|||.+.......  ....||+.
T Consensus       143 ~L~~LH~~givH~Dikp~NIl~~~~------------------------~~~~~~kL~Dfg~a~~~~~~~~~~~~~gt~~  198 (327)
T 3lm5_A          143 GVYYLHQNNIVHLDLKPQNILLSSI------------------------YPLGDIKIVDFGMSRKIGHACELREIMGTPE  198 (327)
T ss_dssp             HHHHHHHTTEECSCCCGGGEEESCB------------------------TTBCCEEECCGGGCEEC---------CCCGG
T ss_pred             HHHHHHHCCeecCcCChHHEEEecC------------------------CCCCcEEEeeCccccccCCccccccccCCcC
Confidence            6899999999999999999999541                        113467888888876543322  23478999


Q ss_pred             cccchhhhcCCCCccchhHhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHHHHHHhhcCCCCCCcc
Q 025467           79 YRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEG  158 (252)
Q Consensus        79 y~aPE~l~~~~~~~~~Diws~G~~l~~l~~g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~  158 (252)
                      |+|||++.+..++.++||||+||++|+|++|..||.+.+.......+.......+.                        
T Consensus       199 y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~------------------------  254 (327)
T 3lm5_A          199 YLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPFVGEDNQETYLNISQVNVDYSE------------------------  254 (327)
T ss_dssp             GCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCT------------------------
T ss_pred             ccCCeeecCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHhcccccCc------------------------
Confidence            99999999889999999999999999999999999887766555544333222111                        


Q ss_pred             ccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCCCCCHHH
Q 025467          159 AASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTARE  238 (252)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~ta~e  238 (252)
                                                                        ......+..+.+||.+||+.||++|||+++
T Consensus       255 --------------------------------------------------~~~~~~~~~~~~li~~~L~~dP~~Rpt~~~  284 (327)
T 3lm5_A          255 --------------------------------------------------ETFSSVSQLATDFIQSLLVKNPEKRPTAEI  284 (327)
T ss_dssp             --------------------------------------------------TTTTTSCHHHHHHHHHHSCSSGGGSCCHHH
T ss_pred             --------------------------------------------------hhhcccCHHHHHHHHHHcCCChhhCcCHHH
Confidence                                                              001234568999999999999999999999


Q ss_pred             HHcCCCCCCccc
Q 025467          239 ALRHPFFTRDHL  250 (252)
Q Consensus       239 ~l~hpwf~~~~~  250 (252)
                      +|+||||+....
T Consensus       285 ll~h~~~~~~~~  296 (327)
T 3lm5_A          285 CLSHSWLQQWDF  296 (327)
T ss_dssp             HTTCGGGCCCCT
T ss_pred             HhCCHhhccccc
Confidence            999999987543

>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*

Probab=99.97  E-value=1.2e-31  Score=223.91  Aligned_cols=175  Identities=32%  Similarity=0.510  Sum_probs=120.5

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCC-----------
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD-----------   69 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~-----------   69 (252)
                      ||+|||++||+||||||+|||++.++.                           ++|+|||.+......           
T Consensus       124 ~L~~LH~~~ivH~Dlkp~Nil~~~~~~---------------------------~kl~Dfg~a~~~~~~~~~~~~~~~~~  176 (353)
T 2b9h_A          124 AVKVLHGSNVIHRDLKPSNLLINSNCD---------------------------LKVCDFGLARIIDESAADNSEPTGQQ  176 (353)
T ss_dssp             HHHHHHHTTEECSCCCGGGEEECTTCC---------------------------EEECCCTTCEECC-------------
T ss_pred             HHHHHHHCCeecCCCCHHHeEEcCCCc---------------------------EEEEecccccccccccccccCccccc
Confidence            689999999999999999999965554                           455555554332110           


Q ss_pred             --CCccccCCCcccchhhhc-CCCCccchhHhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHHHHH
Q 025467           70 --QNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEK  146 (252)
Q Consensus        70 --~~~~~~t~~y~aPE~l~~-~~~~~~~Diws~G~~l~~l~~g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~  146 (252)
                        .....||+.|+|||++.. ..++.++||||+||++|+|++|..||.+.+..+.+..+....|.++....         
T Consensus       177 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~---------  247 (353)
T 2b9h_A          177 SGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIGTPHSDND---------  247 (353)
T ss_dssp             ---CCCCCCGGGCCHHHHHSCCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCSTTT---------
T ss_pred             cchhhccccccccCCeeeccCCCccchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCchhcc---------
Confidence              112368999999999875 57899999999999999999999999998888888888888776542110         


Q ss_pred             HhhcCCCCCCccccchhhHHh-hhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHh
Q 025467          147 YVRRGRLDWPEGAASRESIKS-VMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGL  225 (252)
Q Consensus       147 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~  225 (252)
                            ....    ....... ....+...                            ...........+.++.+||.+|
T Consensus       248 ------~~~~----~~~~~~~~~~~~~~~~----------------------------~~~~~~~~~~~~~~~~~li~~~  289 (353)
T 2b9h_A          248 ------LRCI----ESPRAREYIKSLPMYP----------------------------AAPLEKMFPRVNPKGIDLLQRM  289 (353)
T ss_dssp             ------TTTC----CCHHHHHHHHTSCCCC----------------------------CCCHHHHSTTSCHHHHHHHHHH
T ss_pred             ------cccc----ccchhhHHhhcccCCC----------------------------CcchhhhcccCCHHHHHHHHHh
Confidence                  0000    0000000 00000000                            0000111235677899999999


Q ss_pred             ccCCCCCCCCHHHHHcCCCCCCcc
Q 025467          226 LRYDPTDRLTAREALRHPFFTRDH  249 (252)
Q Consensus       226 L~~dP~~R~ta~e~l~hpwf~~~~  249 (252)
                      |+.||++|||++|+|+||||+...
T Consensus       290 L~~dP~~Rpt~~ell~hp~~~~~~  313 (353)
T 2b9h_A          290 LVFDPAKRITAKEALEHPYLQTYH  313 (353)
T ss_dssp             SCSSGGGSCCHHHHHTSGGGTTTC
T ss_pred             cCcCcccCCCHHHHhcCccccccC
Confidence            999999999999999999998753

>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*

Probab=99.97  E-value=1e-32  Score=232.20  Aligned_cols=152  Identities=15%  Similarity=0.191  Sum_probs=109.8

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCCCccccCCCcc
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYR   80 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~~~~~~t~~y~   80 (252)
                      ||+|||++||+||||||+|||++.                           .+.+||+|||++...........+|+.|+
T Consensus       206 aL~~LH~~~ivHrDikp~NIll~~---------------------------~~~~kL~DFG~a~~~~~~~~~~~~t~~y~  258 (371)
T 3q60_A          206 LAANLQSKGLVHGHFTPDNLFIMP---------------------------DGRLMLGDVSALWKVGTRGPASSVPVTYA  258 (371)
T ss_dssp             HHHHHHHTTEEETTCSGGGEEECT---------------------------TSCEEECCGGGEEETTCEEEGGGSCGGGC
T ss_pred             HHHHHHHCCCccCcCCHHHEEECC---------------------------CCCEEEEecceeeecCCCccCccCCcCCc
Confidence            689999999999999999999944                           44577888887765544332345678999


Q ss_pred             cchhhhc--CCCCccchhHhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHHHHHHhhcCCCCCCcc
Q 025467           81 APEVILG--LGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEG  158 (252)
Q Consensus        81 aPE~l~~--~~~~~~~Diws~G~~l~~l~~g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~  158 (252)
                      |||++.+  ..++.++||||+||++|+|++|..||.+......                             ........
T Consensus       259 aPE~~~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~~-----------------------------~~~~~~~~  309 (371)
T 3q60_A          259 PREFLNASTATFTHALNAWQLGLSIYRVWCLFLPFGLVTPGIK-----------------------------GSWKRPSL  309 (371)
T ss_dssp             CHHHHTCSEEECCHHHHHHHHHHHHHHHHHSSCSTTBCCTTCT-----------------------------TCCCBCCT
T ss_pred             ChhhccCCCCCcCccccHHHHHHHHHHHHhCCCCCCCcCcccc-----------------------------cchhhhhh
Confidence            9999987  5789999999999999999999999976432100                             00000000


Q ss_pred             ccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCCCCCHHH
Q 025467          159 AASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTARE  238 (252)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~ta~e  238 (252)
                             .. ..                                ............++++.+||.+||+.||++|||+.+
T Consensus       310 -------~~-~~--------------------------------~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e  349 (371)
T 3q60_A          310 -------RV-PG--------------------------------TDSLAFGSCTPLPDFVKTLIGRFLNFDRRRRLLPLE  349 (371)
T ss_dssp             -------TS-CC--------------------------------CCSCCCTTSSCCCHHHHHHHHHHTCSSTTTCCCHHH
T ss_pred             -------hh-cc--------------------------------ccccchhhccCCCHHHHHHHHHHcCCChhhCCCHHH
Confidence                   00 00                                000001112345679999999999999999999999


Q ss_pred             HHcCCCCCCc
Q 025467          239 ALRHPFFTRD  248 (252)
Q Consensus       239 ~l~hpwf~~~  248 (252)
                      +|+||||+..
T Consensus       350 ~l~hp~f~~~  359 (371)
T 3q60_A          350 AMETPEFLQL  359 (371)
T ss_dssp             HTTSHHHHHH
T ss_pred             HhcCHHHHHH
Confidence            9999999754

>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*

Probab=99.97  E-value=1e-31  Score=222.12  Aligned_cols=146  Identities=24%  Similarity=0.393  Sum_probs=108.3

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCC-----CCcccc
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD-----QNYIVS   75 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~-----~~~~~~   75 (252)
                      ||+|||++||+||||||+|||++.                           .+.++|+|||.+......     .....|
T Consensus       117 aL~~LH~~givH~Dlkp~NIll~~---------------------------~~~~kl~Dfg~a~~~~~~~~~~~~~~~~g  169 (323)
T 3tki_A          117 GVVYLHGIGITHRDIKPENLLLDE---------------------------RDNLKISDFGLATVFRYNNRERLLNKMCG  169 (323)
T ss_dssp             HHHHHHHTTEECSCCSGGGEEECT---------------------------TCCEEECCCTTCEECEETTEECCBCSCCS
T ss_pred             HHHHHHHCCccccccchHHEEEeC---------------------------CCCEEEEEeeccceeccCCcccccCCCcc
Confidence            689999999999999999999944                           445777777777532211     123478


Q ss_pred             CCCcccchhhhcCCC-CccchhHhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHHHHHHhhcCCCC
Q 025467           76 TRHYRAPEVILGLGW-TYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLD  154 (252)
Q Consensus        76 t~~y~aPE~l~~~~~-~~~~Diws~G~~l~~l~~g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~  154 (252)
                      |+.|+|||++.+..+ +.++||||+||++|+|++|..||...............                     .. . 
T Consensus       170 t~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~---------------------~~-~-  226 (323)
T 3tki_A          170 TLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKE---------------------KK-T-  226 (323)
T ss_dssp             CGGGSCHHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSCTTSHHHHHHHT---------------------TC-T-
T ss_pred             CcCccCcHHhccCCCCCCcccHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHhc---------------------cc-c-
Confidence            999999999988765 77899999999999999999999765432111100000                     00 0 


Q ss_pred             CCccccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCCCC
Q 025467          155 WPEGAASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRL  234 (252)
Q Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~  234 (252)
                                                                          ....+...+..+.+||.+||+.||++||
T Consensus       227 ----------------------------------------------------~~~~~~~~~~~~~~li~~~L~~dP~~R~  254 (323)
T 3tki_A          227 ----------------------------------------------------YLNPWKKIDSAPLALLHKILVENPSARI  254 (323)
T ss_dssp             ----------------------------------------------------TSTTGGGSCHHHHHHHHHHSCSSTTTSC
T ss_pred             ----------------------------------------------------cCCccccCCHHHHHHHHHHccCChhhCc
Confidence                                                                0001133456889999999999999999


Q ss_pred             CHHHHHcCCCCCCc
Q 025467          235 TAREALRHPFFTRD  248 (252)
Q Consensus       235 ta~e~l~hpwf~~~  248 (252)
                      |++|+++||||+..
T Consensus       255 t~~eil~h~~~~~~  268 (323)
T 3tki_A          255 TIPDIKKDRWYNKP  268 (323)
T ss_dssp             CHHHHTTCTTTTCC
T ss_pred             CHHHHhhChhhccc
Confidence            99999999999864

>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...

Probab=99.97  E-value=7.7e-32  Score=218.17  Aligned_cols=145  Identities=30%  Similarity=0.503  Sum_probs=110.8

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCC-CCccccCCCc
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD-QNYIVSTRHY   79 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~-~~~~~~t~~y   79 (252)
                      ||+|||++||+||||||+||+++.                           .+.++|+|||.+...... .....|++.|
T Consensus       121 ~l~~LH~~~i~H~dlkp~Nili~~---------------------------~~~~~l~Dfg~~~~~~~~~~~~~~~~~~y  173 (279)
T 3fdn_A          121 ALSYCHSKRVIHRDIKPENLLLGS---------------------------AGELKIADFGWSVHAPSSRRTDLCGTLDY  173 (279)
T ss_dssp             HHHHHHTTTCEECCCCGGGEEECT---------------------------TSCEEECSCCEESCC--------CCCCTT
T ss_pred             HHHHHHhCCEecccCChHhEEEcC---------------------------CCCEEEEeccccccCCcccccccCCCCCc
Confidence            689999999999999999999954                           445677777766433222 1234688999


Q ss_pred             ccchhhhcCCCCccchhHhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHHHHHHhhcCCCCCCccc
Q 025467           80 RAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGA  159 (252)
Q Consensus        80 ~aPE~l~~~~~~~~~Diws~G~~l~~l~~g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~  159 (252)
                      +|||.+.+..++.++||||+||++|++++|..||.+.+.......+.......|                          
T Consensus       174 ~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~--------------------------  227 (279)
T 3fdn_A          174 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP--------------------------  227 (279)
T ss_dssp             CCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHTCCCCC--------------------------
T ss_pred             cCHhHhccCCCCccchhHhHHHHHHHHHHCCCCCCCCcHHHHHHHHHhCCCCCC--------------------------
Confidence            999999988889999999999999999999999987665544443322111111                          


Q ss_pred             cchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCCCCCHHHH
Q 025467          160 ASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREA  239 (252)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~ta~e~  239 (252)
                                                                          ...++.+.+||.+||+.||.+|||++|+
T Consensus       228 ----------------------------------------------------~~~~~~~~~li~~~l~~~p~~Rps~~e~  255 (279)
T 3fdn_A          228 ----------------------------------------------------DFVTEGARDLISRLLKHNPSQRPMLREV  255 (279)
T ss_dssp             ----------------------------------------------------TTSCHHHHHHHHHHCCSSGGGSCCHHHH
T ss_pred             ----------------------------------------------------CcCCHHHHHHHHHHhccChhhCCCHHHH
Confidence                                                                1234688999999999999999999999


Q ss_pred             HcCCCCCCccc
Q 025467          240 LRHPFFTRDHL  250 (252)
Q Consensus       240 l~hpwf~~~~~  250 (252)
                      ++||||+....
T Consensus       256 l~h~~~~~~~~  266 (279)
T 3fdn_A          256 LEHPWITANSS  266 (279)
T ss_dssp             HHCHHHHHHCS
T ss_pred             hhCccccCCcc
Confidence            99999986543

>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}

Probab=99.97  E-value=6.9e-33  Score=230.13  Aligned_cols=143  Identities=27%  Similarity=0.419  Sum_probs=108.0

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCC--CCccccCCC
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD--QNYIVSTRH   78 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~--~~~~~~t~~   78 (252)
                      ||+|||++||+||||||+|||++                           ..+.++|+|||++......  ....+||+.
T Consensus       120 aL~~LH~~givH~Dlkp~NIll~---------------------------~~~~~kl~DFG~s~~~~~~~~~~~~~gt~~  172 (336)
T 3h4j_B          120 AIEYCHRHKIVHRDLKPENLLLD---------------------------DNLNVKIADFGLSNIMTDGNFLKTSCGSPN  172 (336)
T ss_dssp             HHHHHHHHTCCCCCCSTTTEEEC---------------------------TTCCEEECCSSCTBTTTTSBTTCCCTTSTT
T ss_pred             HHHHHHHCCeEecCCchhhEEEc---------------------------CCCCEEEEEeccceeccCCcccccccCCcC
Confidence            68999999999999999999994                           4445778888877654332  233578999


Q ss_pred             cccchhhhcCCC-CccchhHhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHHHHHHhhcCCCCCCc
Q 025467           79 YRAPEVILGLGW-TYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPE  157 (252)
Q Consensus        79 y~aPE~l~~~~~-~~~~Diws~G~~l~~l~~g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~  157 (252)
                      |+|||++.+..+ +.++||||+||++|+|++|..||.+........       .                ...+.     
T Consensus       173 y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~~~~-------~----------------i~~~~-----  224 (336)
T 3h4j_B          173 YAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEFIPNLFK-------K----------------VNSCV-----  224 (336)
T ss_dssp             TSCGGGSCCSGGGCHHHHHHHHHHHHHHHHHSSCSSBCSSSTTCBC-------C----------------CCSSC-----
T ss_pred             cCCHHHHcCCCCCCCccchhHHHHHHHHHHhCCCCCCCccHHHHHH-------H----------------HHcCC-----
Confidence            999999988776 689999999999999999999996532110000       0                00000     


Q ss_pred             cccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCCCCCHH
Q 025467          158 GAASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAR  237 (252)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~ta~  237 (252)
                                                                        .......++++.+||.+||+.||.+|||++
T Consensus       225 --------------------------------------------------~~~p~~~s~~~~~li~~~L~~dP~~Rpt~~  254 (336)
T 3h4j_B          225 --------------------------------------------------YVMPDFLSPGAQSLIRRMIVADPMQRITIQ  254 (336)
T ss_dssp             --------------------------------------------------CCCCTTSCHHHHHHHHTTSCSSGGGSCCHH
T ss_pred             --------------------------------------------------CCCcccCCHHHHHHHHHHcCCChhHCcCHH
Confidence                                                              001123457899999999999999999999


Q ss_pred             HHHcCCCCCCc
Q 025467          238 EALRHPFFTRD  248 (252)
Q Consensus       238 e~l~hpwf~~~  248 (252)
                      |+++||||+..
T Consensus       255 eil~hp~~~~~  265 (336)
T 3h4j_B          255 EIRRDPWFNVN  265 (336)
T ss_dssp             HHTTCHHHHTT
T ss_pred             HHHhChhhccC
Confidence            99999999764

>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...

Probab=99.97  E-value=1.4e-31  Score=221.61  Aligned_cols=182  Identities=25%  Similarity=0.526  Sum_probs=121.9

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCC--CCccccCCC
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD--QNYIVSTRH   78 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~--~~~~~~t~~   78 (252)
                      ||+|||++||+||||||+|||++.++                          ..++|+|||.+......  .....++..
T Consensus       142 ~l~~lH~~~ivH~Dikp~Nil~~~~~--------------------------~~~kl~Dfg~a~~~~~~~~~~~~~~~~~  195 (330)
T 3nsz_A          142 ALDYCHSMGIMHRDVKPHNVMIDHEH--------------------------RKLRLIDWGLAEFYHPGQEYNVRVASRY  195 (330)
T ss_dssp             HHHHHHHTTEECCCCSGGGEEEETTT--------------------------TEEEECCCTTCEECCTTCCCCSCCSCGG
T ss_pred             HHHHHHhCCeeeCCCCHHHEEEcCCC--------------------------CEEEEEeCCCceEcCCCCcccccccccc
Confidence            68999999999999999999995432                          25788888887643322  223478889


Q ss_pred             cccchhhhc-CCCCccchhHhHHHHHHHHHhCCCCCC-CCChHHHHHHHHHHhCCCchHHHHHhhHHHHHHhhcCCCCCC
Q 025467           79 YRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQ-THENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWP  156 (252)
Q Consensus        79 y~aPE~l~~-~~~~~~~Diws~G~~l~~l~~g~~pf~-~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~  156 (252)
                      |+|||++.+ ..++.++||||+||++|+|++|..||. +.+..+.+..+....+..+  ....+        ........
T Consensus       196 y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~p~~~~~~~~~~l~~~~~~~~~~~--~~~~~--------~~~~~~~~  265 (330)
T 3nsz_A          196 FKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTED--LYDYI--------DKYNIELD  265 (330)
T ss_dssp             GCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHHHHHHCHHH--HHHHH--------HHTTCCCC
T ss_pred             ccChhhhcCCCcCCchhhHHHHHHHHHHHHhCCCCcccCCchHHHHHHHHHhcCCch--hhhHH--------HHhccccc
Confidence            999999987 568999999999999999999999984 4456667777777666422  11111        11111111


Q ss_pred             ccccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCCCCCH
Q 025467          157 EGAASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTA  236 (252)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~ta  236 (252)
                      .      ..........         ...+.                ...........++++.+||.+||++||++||||
T Consensus       266 ~------~~~~~~~~~~---------~~~~~----------------~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta  314 (330)
T 3nsz_A          266 P------RFNDILGRHS---------RKRWE----------------RFVHSENQHLVSPEALDFLDKLLRYDHQSRLTA  314 (330)
T ss_dssp             T------HHHHHHCCCC---------CCCGG----------------GGCCTTTGGGCCHHHHHHHHTTSCSSGGGSCCH
T ss_pred             c------chhhhhhhcc---------ccchh----------------hhccccccccCCHHHHHHHHHHhcCCcccCCCH
Confidence            0      0000000000         00000                000111223467899999999999999999999


Q ss_pred             HHHHcCCCCCCcc
Q 025467          237 REALRHPFFTRDH  249 (252)
Q Consensus       237 ~e~l~hpwf~~~~  249 (252)
                      +|+|+||||+...
T Consensus       315 ~e~l~hp~f~~~~  327 (330)
T 3nsz_A          315 REAMEHPYFYTVV  327 (330)
T ss_dssp             HHHHTSGGGTTCC
T ss_pred             HHHhcCccHhhhc
Confidence            9999999999764

>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}

Probab=99.97  E-value=5.1e-32  Score=222.78  Aligned_cols=140  Identities=26%  Similarity=0.399  Sum_probs=104.0

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCC--CccccCCC
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ--NYIVSTRH   78 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~--~~~~~t~~   78 (252)
                      ||+|||++||+||||||+|||++.+                           +.++|+|||++.......  ....||+.
T Consensus       169 aL~~LH~~~ivH~Dikp~NIll~~~---------------------------~~~kl~DFG~a~~~~~~~~~~~~~gt~~  221 (311)
T 3p1a_A          169 ALAHLHSQGLVHLDVKPANIFLGPR---------------------------GRCKLGDFGLLVELGTAGAGEVQEGDPR  221 (311)
T ss_dssp             HHHHHHHTTEECCCCSGGGEEECGG---------------------------GCEEECCCTTCEECC------CCCCCGG
T ss_pred             HHHHHHHCCEecCCCCHHHEEECCC---------------------------CCEEEccceeeeecccCCCCcccCCCcc
Confidence            6899999999999999999999544                           456777777765443222  22468999


Q ss_pred             cccchhhhcCCCCccchhHhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHHHHHHhhcCCCCCCcc
Q 025467           79 YRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEG  158 (252)
Q Consensus        79 y~aPE~l~~~~~~~~~Diws~G~~l~~l~~g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~  158 (252)
                      |+|||++.+ .++.++||||+||++|++++|..++.+...   ...+..  +..+.                        
T Consensus       222 y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~~~~~~~~---~~~~~~--~~~~~------------------------  271 (311)
T 3p1a_A          222 YMAPELLQG-SYGTAADVFSLGLTILEVACNMELPHGGEG---WQQLRQ--GYLPP------------------------  271 (311)
T ss_dssp             GCCGGGGGT-CCSTHHHHHHHHHHHHHHHHTCCCCSSHHH---HHHHTT--TCCCH------------------------
T ss_pred             ccCHhHhcC-CCCchhhHHHHHHHHHHHHhCCCCCCCccH---HHHHhc--cCCCc------------------------
Confidence            999999876 789999999999999999999877653221   111100  11110                        


Q ss_pred             ccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCCCCCHHH
Q 025467          159 AASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTARE  238 (252)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~ta~e  238 (252)
                                                                        ......++++.+||.+||+.||++|||++|
T Consensus       272 --------------------------------------------------~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e  301 (311)
T 3p1a_A          272 --------------------------------------------------EFTAGLSSELRSVLVMMLEPDPKLRATAEA  301 (311)
T ss_dssp             --------------------------------------------------HHHTTSCHHHHHHHHHHSCSSTTTSCCHHH
T ss_pred             --------------------------------------------------ccccCCCHHHHHHHHHHcCCChhhCcCHHH
Confidence                                                              011234578999999999999999999999


Q ss_pred             HHcCCCCCC
Q 025467          239 ALRHPFFTR  247 (252)
Q Consensus       239 ~l~hpwf~~  247 (252)
                      +|+||||++
T Consensus       302 ll~hp~~~~  310 (311)
T 3p1a_A          302 LLALPVLRQ  310 (311)
T ss_dssp             HHTSGGGSC
T ss_pred             HHhCccccC
Confidence            999999975

>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*

Probab=99.97  E-value=7e-32  Score=228.49  Aligned_cols=199  Identities=19%  Similarity=0.286  Sum_probs=109.4

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccc-cCCCCCccccCCCc
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTY-ERPDQNYIVSTRHY   79 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~-~~~~~~~~~~t~~y   79 (252)
                      ||+|||++||+||||||+|||++.++.+++.|||.+..                  +.+.+.... .........||+.|
T Consensus       140 ~l~~LH~~~ivHrDlkp~NIll~~~~~~kl~dfg~~~~------------------~~~~~~~~~~~~~~~~~~~gt~~y  201 (389)
T 3gni_B          140 ALDYIHHMGYVHRSVKASHILISVDGKVYLSGLRSNLS------------------MISHGQRQRVVHDFPKYSVKVLPW  201 (389)
T ss_dssp             HHHHHHHTTEECCCCSGGGEEECTTCCEEECCGGGCEE------------------CEETTEECSCBCCCCTTCTTTGGG
T ss_pred             HHHHHHhCCeecCCCCHHHEEEcCCCCEEEccccccee------------------eccccccccccccccccccccccc
Confidence            68999999999999999999996666555555544311                  111111111 11112234788999


Q ss_pred             ccchhhhc--CCCCccchhHhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHHHHHHhhcCCCCCCc
Q 025467           80 RAPEVILG--LGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPE  157 (252)
Q Consensus        80 ~aPE~l~~--~~~~~~~Diws~G~~l~~l~~g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~  157 (252)
                      +|||++.+  ..++.++||||+||++|+|++|..||.+.+....+..+..  +..+... ................    
T Consensus       202 ~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~--~~~~~~~-~~~~~~~~~~~~~~~~----  274 (389)
T 3gni_B          202 LSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLN--GTVPCLL-DTSTIPAEELTMSPSR----  274 (389)
T ss_dssp             SCHHHHSTTSSCBCTHHHHHHHHHHHHHHHHSSCTTTTCCSTTHHHHC--------------------------------
T ss_pred             cCHHHHhccCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHhc--CCCCccc-cccccccccccccccc----
Confidence            99999987  5789999999999999999999999987665444332211  1111100 0000000000000000    


Q ss_pred             cccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCCCCCHH
Q 025467          158 GAASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAR  237 (252)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~ta~  237 (252)
                       .............                        ...................++++.+||.+||++||++|||++
T Consensus       275 -~~~~~~~~~~~~~------------------------~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpta~  329 (389)
T 3gni_B          275 -SVANSGLSDSLTT------------------------STPRPSNGDSPSHPYHRTFSPHFHHFVEQCLQRNPDARPSAS  329 (389)
T ss_dssp             --------------------------------------------------------CCHHHHHHHHHHTCSCTTTSCCHH
T ss_pred             -ccccccccccccc------------------------CccccccCCCCCCccccccCHHHHHHHHHHhhcCcccCCCHH
Confidence             0000000000000                        000000001111123455678999999999999999999999


Q ss_pred             HHHcCCCCCCcc
Q 025467          238 EALRHPFFTRDH  249 (252)
Q Consensus       238 e~l~hpwf~~~~  249 (252)
                      |+|+||||+...
T Consensus       330 ell~hp~f~~~~  341 (389)
T 3gni_B          330 TLLNHSFFKQIK  341 (389)
T ss_dssp             HHTTSGGGGGC-
T ss_pred             HHhcCHHHHHHh
Confidence            999999998754

>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}

Probab=99.97  E-value=1.7e-31  Score=223.07  Aligned_cols=152  Identities=28%  Similarity=0.436  Sum_probs=107.5

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCC--CccccCCC
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ--NYIVSTRH   78 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~--~~~~~t~~   78 (252)
                      ||+|||++||+||||||+|||++..                        .....++|+|||++.......  ....||+.
T Consensus       160 ~L~~LH~~~ivH~Dikp~NIll~~~------------------------~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~  215 (349)
T 2w4o_A          160 AVAYLHENGIVHRDLKPENLLYATP------------------------APDAPLKIADFGLSKIVEHQVLMKTVCGTPG  215 (349)
T ss_dssp             HHHHHHHTTCCCCCCCGGGEEESSS------------------------STTCCEEECCCC----------------CGG
T ss_pred             HHHHHHHCCeEecCCCcccEEEecC------------------------CCCCCEEEccCccccccCcccccccccCCCC
Confidence            6899999999999999999999541                        124567888888876543321  23478999


Q ss_pred             cccchhhhcCCCCccchhHhHHHHHHHHHhCCCCCCCCChHHH-HHHHHHHhCCCchHHHHHhhHHHHHHhhcCCCCCCc
Q 025467           79 YRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEH-LAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPE  157 (252)
Q Consensus        79 y~aPE~l~~~~~~~~~Diws~G~~l~~l~~g~~pf~~~~~~~~-~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~  157 (252)
                      |+|||++.+..++.++||||+||++|+|++|..||........ +..+..                       .....+ 
T Consensus       216 y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~i~~-----------------------~~~~~~-  271 (349)
T 2w4o_A          216 YCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYDERGDQFMFRRILN-----------------------CEYYFI-  271 (349)
T ss_dssp             GSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCTTCHHHHHHHHHT-----------------------TCCCCC-
T ss_pred             ccCHHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCcccHHHHHHHHh-----------------------CCCccC-
Confidence            9999999988899999999999999999999999976554332 111111                       000000 


Q ss_pred             cccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCCCCCHH
Q 025467          158 GAASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAR  237 (252)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~ta~  237 (252)
                                                                        ...+...+.++.+||.+||+.||++|||+.
T Consensus       272 --------------------------------------------------~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~  301 (349)
T 2w4o_A          272 --------------------------------------------------SPWWDEVSLNAKDLVRKLIVLDPKKRLTTF  301 (349)
T ss_dssp             --------------------------------------------------TTTTTTSCHHHHHHHHTTSCSSGGGSCCHH
T ss_pred             --------------------------------------------------CchhhhCCHHHHHHHHHHccCChhhCcCHH
Confidence                                                              001133456899999999999999999999


Q ss_pred             HHHcCCCCCCccc
Q 025467          238 EALRHPFFTRDHL  250 (252)
Q Consensus       238 e~l~hpwf~~~~~  250 (252)
                      |+|+||||.....
T Consensus       302 e~l~hp~~~~~~~  314 (349)
T 2w4o_A          302 QALQHPWVTGKAA  314 (349)
T ss_dssp             HHHHSTTTTSTTC
T ss_pred             HHhcCcccCCCcc
Confidence            9999999987643

>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*

Probab=99.97  E-value=8.1e-32  Score=230.81  Aligned_cols=148  Identities=26%  Similarity=0.458  Sum_probs=114.0

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCC----CccccC
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ----NYIVST   76 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~----~~~~~t   76 (252)
                      ||+|||++||+||||||+|||++                           ..+.+||+|||+++......    ...+||
T Consensus       187 aL~~LH~~giiHrDLKp~NILl~---------------------------~~g~vkL~DFGla~~~~~~~~~~~~~~~GT  239 (437)
T 4aw2_A          187 AIDSVHQLHYVHRDIKPDNILMD---------------------------MNGHIRLADFGSCLKLMEDGTVQSSVAVGT  239 (437)
T ss_dssp             HHHHHHHTTEECCCCSGGGEEEC---------------------------TTSCEEECCCTTCEECCTTSCEECCSCCSC
T ss_pred             HHHHHHhCCeEecccCHHHeeEc---------------------------CCCCEEEcchhhhhhcccCCCcccccccCC
Confidence            68999999999999999999994                           44567777777775433322    224799


Q ss_pred             CCcccchhhh-----cCCCCccchhHhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHHHHHHhhcC
Q 025467           77 RHYRAPEVIL-----GLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRG  151 (252)
Q Consensus        77 ~~y~aPE~l~-----~~~~~~~~Diws~G~~l~~l~~g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~  151 (252)
                      +.|+|||++.     ...|+.++||||+||++|+|++|..||.+.+..+....+.....                     
T Consensus       240 ~~Y~APE~l~~~~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~---------------------  298 (437)
T 4aw2_A          240 PDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKE---------------------  298 (437)
T ss_dssp             GGGCCHHHHHHHHTSCCEECTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTHHH---------------------
T ss_pred             cCeeChHHHhhcccCCCCCCCcCeeHHHHHHHHHHHhCCCCCCCCChhHHHHhhhhccc---------------------
Confidence            9999999997     45689999999999999999999999998776665554432110                     


Q ss_pred             CCCCCccccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCC
Q 025467          152 RLDWPEGAASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPT  231 (252)
Q Consensus       152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~  231 (252)
                      .+.+|.                                                    .....++++++||++||+.+|.
T Consensus       299 ~~~~p~----------------------------------------------------~~~~~s~~~~dLi~~lL~~~~~  326 (437)
T 4aw2_A          299 RFQFPT----------------------------------------------------QVTDVSENAKDLIRRLICSREH  326 (437)
T ss_dssp             HCCCCS----------------------------------------------------SCCCSCHHHHHHHHTTSSCGGG
T ss_pred             cccCCc----------------------------------------------------ccccCCHHHHHHHHHHhccccc
Confidence            011111                                                    0123567899999999999998


Q ss_pred             C--CCCHHHHHcCCCCCCc
Q 025467          232 D--RLTAREALRHPFFTRD  248 (252)
Q Consensus       232 ~--R~ta~e~l~hpwf~~~  248 (252)
                      +  |++++|+++||||+..
T Consensus       327 r~~r~~~~eil~Hpff~~i  345 (437)
T 4aw2_A          327 RLGQNGIEDFKKHPFFSGI  345 (437)
T ss_dssp             CTTTTTTHHHHTSGGGTTC
T ss_pred             ccCCCCHHHHhCCCccCCC
Confidence            8  9999999999999865

>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A

Probab=99.97  E-value=4.6e-31  Score=221.74  Aligned_cols=146  Identities=33%  Similarity=0.562  Sum_probs=110.4

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCC--CccccCCC
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ--NYIVSTRH   78 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~--~~~~~t~~   78 (252)
                      ||+|||+.||+||||||+||+++.                           .+.++|+|||++.......  ....||+.
T Consensus       212 ~L~~LH~~gi~H~Dlkp~NIl~~~---------------------------~~~ikl~DfG~~~~~~~~~~~~~~~gt~~  264 (365)
T 2y7j_A          212 AVSFLHANNIVHRDLKPENILLDD---------------------------NMQIRLSDFGFSCHLEPGEKLRELCGTPG  264 (365)
T ss_dssp             HHHHHHHTTEECSCCSGGGEEECT---------------------------TCCEEECCCTTCEECCTTCCBCCCCSCGG
T ss_pred             HHHHHHhCCeecCCCCHHHEEECC---------------------------CCCEEEEecCcccccCCCcccccCCCCCC
Confidence            689999999999999999999944                           4457777777765443322  23478999


Q ss_pred             cccchhhhcC------CCCccchhHhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHHHHHHhhcCC
Q 025467           79 YRAPEVILGL------GWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGR  152 (252)
Q Consensus        79 y~aPE~l~~~------~~~~~~Diws~G~~l~~l~~g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~  152 (252)
                      |+|||++.+.      .++.++||||+||++|+|++|..||.+......+..+.......+.                  
T Consensus       265 y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~------------------  326 (365)
T 2y7j_A          265 YLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRRQILMLRMIMEGQYQFSS------------------  326 (365)
T ss_dssp             GCCHHHHHHTTCTTSCCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCH------------------
T ss_pred             ccChhhccccccccCcCCCchhhHHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHhCCCCCCC------------------
Confidence            9999998743      5788999999999999999999999876654443333221111100                  


Q ss_pred             CCCCccccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCC
Q 025467          153 LDWPEGAASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTD  232 (252)
Q Consensus       153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~  232 (252)
                                                                              ..+...+..+.+||.+||+.||++
T Consensus       327 --------------------------------------------------------~~~~~~~~~~~~li~~~L~~dP~~  350 (365)
T 2y7j_A          327 --------------------------------------------------------PEWDDRSSTVKDLISRLLQVDPEA  350 (365)
T ss_dssp             --------------------------------------------------------HHHSSSCHHHHHHHHHHSCSSTTT
T ss_pred             --------------------------------------------------------cccccCCHHHHHHHHHHcCCChhH
Confidence                                                                    001234568999999999999999


Q ss_pred             CCCHHHHHcCCCCCC
Q 025467          233 RLTAREALRHPFFTR  247 (252)
Q Consensus       233 R~ta~e~l~hpwf~~  247 (252)
                      |||++++|+||||++
T Consensus       351 Rps~~ell~hp~f~r  365 (365)
T 2y7j_A          351 RLTAEQALQHPFFER  365 (365)
T ss_dssp             SCCHHHHHHSGGGCC
T ss_pred             CcCHHHHhcCcccCC
Confidence            999999999999974

>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A

Probab=99.97  E-value=7.1e-32  Score=224.70  Aligned_cols=150  Identities=31%  Similarity=0.521  Sum_probs=111.7

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCC---CCccccCC
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD---QNYIVSTR   77 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~---~~~~~~t~   77 (252)
                      ||+|||++||+||||||+|||+....                       .....++|+|||++......   ....+||+
T Consensus       128 al~~lH~~givHrDlkp~NIl~~~~~-----------------------~~~~~~kl~Dfg~a~~~~~~~~~~~~~~gt~  184 (342)
T 2qr7_A          128 TVEYLHAQGVVHRDLKPSNILYVDES-----------------------GNPESIRICDFGFAKQLRAENGLLMTPCYTA  184 (342)
T ss_dssp             HHHHHHHTTEECSCCCGGGEEESSSS-----------------------CSGGGEEECCCTTCEECBCTTCCBCCSSCCS
T ss_pred             HHHHHHHCCcEeccCCHHHEEEecCC-----------------------CCcCeEEEEECCCcccCcCCCCceeccCCCc
Confidence            68999999999999999999984432                       12235789999988654322   12347899


Q ss_pred             CcccchhhhcCCCCccchhHhHHHHHHHHHhCCCCCCCCCh---HHHHHHHHHHhCCCchHHHHHhhHHHHHHhhcCCCC
Q 025467           78 HYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHEN---LEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLD  154 (252)
Q Consensus        78 ~y~aPE~l~~~~~~~~~Diws~G~~l~~l~~g~~pf~~~~~---~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~  154 (252)
                      .|+|||++.+..++.++||||+||++|+|++|..||.+...   .+.+..+.                       .+.+.
T Consensus       185 ~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~~~~i~-----------------------~~~~~  241 (342)
T 2qr7_A          185 NFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFANGPDDTPEEILARIG-----------------------SGKFS  241 (342)
T ss_dssp             SCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSSCSSTTSCHHHHHHHHH-----------------------HCCCC
T ss_pred             cccCHHHhcCCCCCCccCeeeHhHHHHHHhcCCCCCCCCCcCCHHHHHHHHc-----------------------cCCcc
Confidence            99999999887889999999999999999999999976322   11221111                       11111


Q ss_pred             CCccccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCCCC
Q 025467          155 WPEGAASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRL  234 (252)
Q Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~  234 (252)
                      .+.                                                   ..+...++++.+||.+||..||++||
T Consensus       242 ~~~---------------------------------------------------~~~~~~s~~~~~li~~~L~~dP~~R~  270 (342)
T 2qr7_A          242 LSG---------------------------------------------------GYWNSVSDTAKDLVSKMLHVDPHQRL  270 (342)
T ss_dssp             CCS---------------------------------------------------TTTTTSCHHHHHHHHHHTCSSTTTSC
T ss_pred             cCc---------------------------------------------------cccccCCHHHHHHHHHHCCCChhHCc
Confidence            110                                                   11234567899999999999999999


Q ss_pred             CHHHHHcCCCCCC
Q 025467          235 TAREALRHPFFTR  247 (252)
Q Consensus       235 ta~e~l~hpwf~~  247 (252)
                      |+.++++||||..
T Consensus       271 t~~~il~hp~~~~  283 (342)
T 2qr7_A          271 TAALVLRHPWIVH  283 (342)
T ss_dssp             CHHHHTTSHHHHT
T ss_pred             CHHHHhcCCeecC
Confidence            9999999999964

>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*

Probab=99.97  E-value=2.6e-31  Score=215.47  Aligned_cols=152  Identities=29%  Similarity=0.452  Sum_probs=117.5

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCC--CccccCCC
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ--NYIVSTRH   78 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~--~~~~~t~~   78 (252)
                      ||+|||++||+||||||+||+++.++                        ....++|+|||.+.......  ....||+.
T Consensus       117 ~l~~lH~~~i~H~dikp~Nil~~~~~------------------------~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~  172 (284)
T 3kk8_A          117 SIAYCHSNGIVHRNLKPENLLLASKA------------------------KGAAVKLADFGLAIEVNDSEAWHGFAGTPG  172 (284)
T ss_dssp             HHHHHHHTTEECSCCCGGGEEESSSS------------------------TTCCEEECCCTTCEECCSSCBCCCSCSCGG
T ss_pred             HHHHHHHCCcCcCCCCHHHEEEecCC------------------------CCCcEEEeeceeeEEcccCccccCCCCCcC
Confidence            68999999999999999999995432                        23457888998886544332  23478999


Q ss_pred             cccchhhhcCCCCccchhHhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHHHHHHhhcCCCCCCcc
Q 025467           79 YRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEG  158 (252)
Q Consensus        79 y~aPE~l~~~~~~~~~Diws~G~~l~~l~~g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~  158 (252)
                      |+|||++.+..++.++||||+||++|++++|..||.+.+.......+.......|                       . 
T Consensus       173 y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~-----------------------~-  228 (284)
T 3kk8_A          173 YLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYP-----------------------S-  228 (284)
T ss_dssp             GCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCC-----------------------T-
T ss_pred             CcCchhhcCCCCCcccchHHHHHHHHHHHHCCCCCCCCchhHHHHHHHhccccCC-----------------------c-
Confidence            9999999998899999999999999999999999987766554443322111111                       0 


Q ss_pred             ccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCCCCCHHH
Q 025467          159 AASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTARE  238 (252)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~ta~e  238 (252)
                                                                        ......++++.+|+.+||+.||++|||++|
T Consensus       229 --------------------------------------------------~~~~~~~~~~~~li~~~l~~dp~~Rps~~~  258 (284)
T 3kk8_A          229 --------------------------------------------------PEWDTVTPEAKSLIDSMLTVNPKKRITADQ  258 (284)
T ss_dssp             --------------------------------------------------TTTTTSCHHHHHHHHHHSCSSTTTSCCHHH
T ss_pred             --------------------------------------------------hhhcccCHHHHHHHHHHcccChhhCCCHHH
Confidence                                                              001234568999999999999999999999


Q ss_pred             HHcCCCCCCccc
Q 025467          239 ALRHPFFTRDHL  250 (252)
Q Consensus       239 ~l~hpwf~~~~~  250 (252)
                      +|+||||+....
T Consensus       259 ~l~h~~~~~~~~  270 (284)
T 3kk8_A          259 ALKVPWICNRER  270 (284)
T ss_dssp             HTTSHHHHSCCC
T ss_pred             HhcCccccCChh
Confidence            999999987643

>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A

Probab=99.97  E-value=7.6e-33  Score=233.51  Aligned_cols=138  Identities=22%  Similarity=0.377  Sum_probs=105.4

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCCCccccCCCcc
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYR   80 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~~~~~~t~~y~   80 (252)
                      ||+|||++||+||||||+|||++.                           .+.+||+|||++..........+| +.|+
T Consensus       218 aL~~LH~~~ivHrDikp~NIll~~---------------------------~~~~kL~DFG~a~~~~~~~~~~~g-~~y~  269 (377)
T 3byv_A          218 LLASLHHYGLVHTYLRPVDIVLDQ---------------------------RGGVFLTGFEHLVRDGARVVSSVS-RGFE  269 (377)
T ss_dssp             HHHHHHHTTEECSCCCGGGEEECT---------------------------TCCEEECCGGGCEETTCEEECCCC-TTCC
T ss_pred             HHHHHHhCCeecCCCCHHHEEEcC---------------------------CCCEEEEechhheecCCcccCCCC-cCcc
Confidence            689999999999999999999954                           445777777777654443334467 8999


Q ss_pred             cchhhhcC-----------CCCccchhHhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHHHHHHhh
Q 025467           81 APEVILGL-----------GWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVR  149 (252)
Q Consensus        81 aPE~l~~~-----------~~~~~~Diws~G~~l~~l~~g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~  149 (252)
                      |||++.+.           .++.++||||+||++|+|++|..||.+........                          
T Consensus       270 aPE~~~~~~~~~~~~~~~~~~~~~~DvwSlG~il~elltg~~Pf~~~~~~~~~~--------------------------  323 (377)
T 3byv_A          270 PPELEARRATISYHRDRRTLMTFSFDAWALGLVIYWIWCADLPITKDAALGGSE--------------------------  323 (377)
T ss_dssp             CHHHHHHHTSTHHHHCCEEECCHHHHHHHHHHHHHHHHHSSCCC------CCSG--------------------------
T ss_pred             ChhhhcccccccccccccccCChhhhHHHHHHHHHHHHHCCCCCcccccccchh--------------------------
Confidence            99999887           79999999999999999999999996432110000                          


Q ss_pred             cCCCCCCccccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCC
Q 025467          150 RGRLDWPEGAASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYD  229 (252)
Q Consensus       150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~d  229 (252)
                                       .                                       ........++++.+||.+||+.|
T Consensus       324 -----------------~---------------------------------------~~~~~~~~~~~~~~li~~~L~~d  347 (377)
T 3byv_A          324 -----------------W---------------------------------------IFRSCKNIPQPVRALLEGFLRYP  347 (377)
T ss_dssp             -----------------G---------------------------------------GGSSCCCCCHHHHHHHHHHTCSS
T ss_pred             -----------------h---------------------------------------hhhhccCCCHHHHHHHHHHcCCC
Confidence                             0                                       00001234578999999999999


Q ss_pred             CCCCCCHHHHHcCCCCCCc
Q 025467          230 PTDRLTAREALRHPFFTRD  248 (252)
Q Consensus       230 P~~R~ta~e~l~hpwf~~~  248 (252)
                      |++|||+.|+++||||+..
T Consensus       348 p~~Rpt~~e~l~hp~f~~~  366 (377)
T 3byv_A          348 KEDRLLPLQAMETPEYEQL  366 (377)
T ss_dssp             GGGCCCHHHHHTSHHHHHH
T ss_pred             chhCCCHHHHhhChHHHHH
Confidence            9999999999999999753

>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C

Probab=99.97  E-value=1e-31  Score=228.30  Aligned_cols=154  Identities=28%  Similarity=0.512  Sum_probs=108.6

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCC--CCccccCCC
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD--QNYIVSTRH   78 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~--~~~~~~t~~   78 (252)
                      ||+|||++||+||||||+|||++..+                        ..+.+||+|||+++.....  ....+||+.
T Consensus       173 aL~~LH~~~ivHrDlkp~Nill~~~~------------------------~~~~~kl~DFG~a~~~~~~~~~~~~~gt~~  228 (400)
T 1nxk_A          173 AIQYLHSINIAHRDVKPENLLYTSKR------------------------PNAILKLTDFGFAKETTSHNSLTTPCYTPY  228 (400)
T ss_dssp             HHHHHHHTTEECCCCCGGGEEESSSS------------------------TTCCEEECCCTTCEECC-----------CT
T ss_pred             HHHHHHHCCccccCcCcceEEEecCC------------------------CCccEEEEecccccccCCCCccccCCCCCC
Confidence            68999999999999999999995421                        2456888888888754332  233578999


Q ss_pred             cccchhhhcCCCCccchhHhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHHHHHHhhcCCCCCCcc
Q 025467           79 YRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEG  158 (252)
Q Consensus        79 y~aPE~l~~~~~~~~~Diws~G~~l~~l~~g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~  158 (252)
                      |+|||++.+..|+.++||||+||++|+|++|..||.+......           .....        .....+....+. 
T Consensus       229 y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~-----------~~~~~--------~~i~~~~~~~~~-  288 (400)
T 1nxk_A          229 YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAI-----------SPGMK--------TRIRMGQYEFPN-  288 (400)
T ss_dssp             TCCGGGSCCCCSSSHHHHHHHHHHHHHHHHSSCSCCCCTTCSS-----------CCSHH--------HHHHHTCCCCCT-
T ss_pred             ccCHhhcCCCCCCCcccHHHHHHHHHHHHhCCCCCCCCccccc-----------cHHHH--------HHHHcCcccCCC-
Confidence            9999999888999999999999999999999999976542110           00000        000111111110 


Q ss_pred             ccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCCCCCHHH
Q 025467          159 AASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTARE  238 (252)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~ta~e  238 (252)
                                                                        ..+...+.++.+||.+||+.||++|||++|
T Consensus       289 --------------------------------------------------~~~~~~s~~~~~li~~~L~~dP~~Rpt~~e  318 (400)
T 1nxk_A          289 --------------------------------------------------PEWSEVSEEVKMLIRNLLKTEPTQRMTITE  318 (400)
T ss_dssp             --------------------------------------------------TTTTTSCHHHHHHHHTTSCSSGGGSCCHHH
T ss_pred             --------------------------------------------------cccccCCHHHHHHHHHHCCCChhHCcCHHH
Confidence                                                              011345678999999999999999999999


Q ss_pred             HHcCCCCCCc
Q 025467          239 ALRHPFFTRD  248 (252)
Q Consensus       239 ~l~hpwf~~~  248 (252)
                      +++||||...
T Consensus       319 il~hp~~~~~  328 (400)
T 1nxk_A          319 FMNHPWIMQS  328 (400)
T ss_dssp             HHHSHHHHTT
T ss_pred             HhcCccccCC
Confidence            9999999754

>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}

Probab=99.97  E-value=4.6e-31  Score=214.42  Aligned_cols=147  Identities=31%  Similarity=0.470  Sum_probs=107.6

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCC--CCccccCCC
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD--QNYIVSTRH   78 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~--~~~~~~t~~   78 (252)
                      ||+|||++||+||||||+||++...                        .....++|+|||.+......  .....||+.
T Consensus       136 ~L~~LH~~~ivH~dikp~NIl~~~~------------------------~~~~~~kl~Dfg~a~~~~~~~~~~~~~~t~~  191 (285)
T 3is5_A          136 ALAYFHSQHVVHKDLKPENILFQDT------------------------SPHSPIKIIDFGLAELFKSDEHSTNAAGTAL  191 (285)
T ss_dssp             HHHHHHHTTCCCCCCSGGGEEESSS------------------------STTCCEEECCCCCCCC----------CTTGG
T ss_pred             HHHHHHhCCEEECCCCHHHEEEecC------------------------CCCCCEEEEeeecceecCCcccCcCcccccC
Confidence            6899999999999999999999432                        12346788888888654332  223468999


Q ss_pred             cccchhhhcCCCCccchhHhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHHHHHHhhcCCCCCCcc
Q 025467           79 YRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEG  158 (252)
Q Consensus        79 y~aPE~l~~~~~~~~~Diws~G~~l~~l~~g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~  158 (252)
                      |+|||++. ..++.++||||+||++|+|++|..||.+.+..............                       ... 
T Consensus       192 y~aPE~~~-~~~~~~~Di~slG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~-----------------------~~~-  246 (285)
T 3is5_A          192 YMAPEVFK-RDVTFKCDIWSAGVVMYFLLTGCLPFTGTSLEEVQQKATYKEPN-----------------------YAV-  246 (285)
T ss_dssp             GCCHHHHT-TCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCC-----------------------CCC-
T ss_pred             cCChHHhc-cCCCcccCeehHHHHHHHHHhCCCCCCCCCHHHHHhhhccCCcc-----------------------ccc-
Confidence            99999875 46889999999999999999999999876544333221110000                       000 


Q ss_pred             ccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCCCCCHHH
Q 025467          159 AASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTARE  238 (252)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~ta~e  238 (252)
                                                                         .....++++.+||.+||+.||++|||+.|
T Consensus       247 ---------------------------------------------------~~~~~~~~~~~li~~~L~~dP~~Rps~~e  275 (285)
T 3is5_A          247 ---------------------------------------------------ECRPLTPQAVDLLKQMLTKDPERRPSAAQ  275 (285)
T ss_dssp             -----------------------------------------------------CCCCHHHHHHHHHHTCSCTTTSCCHHH
T ss_pred             ---------------------------------------------------ccCcCCHHHHHHHHHHccCChhhCcCHHH
Confidence                                                               00123568899999999999999999999


Q ss_pred             HHcCCCCCC
Q 025467          239 ALRHPFFTR  247 (252)
Q Consensus       239 ~l~hpwf~~  247 (252)
                      +|+||||++
T Consensus       276 ~l~hp~f~~  284 (285)
T 3is5_A          276 VLHHEWFKQ  284 (285)
T ss_dssp             HHTSGGGGC
T ss_pred             HhcCHHhhc
Confidence            999999985

>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A

Probab=99.97  E-value=1.3e-31  Score=224.81  Aligned_cols=150  Identities=27%  Similarity=0.426  Sum_probs=101.5

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCC--CCCccccCCC
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERP--DQNYIVSTRH   78 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~--~~~~~~~t~~   78 (252)
                      ||+|||++||+||||||+|||++.++                         ...++|+|||.++....  ......||+.
T Consensus       128 ~L~~LH~~~ivH~Dlkp~Nill~~~~-------------------------~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~  182 (361)
T 3uc3_A          128 GVSYCHSMQICHRDLKLENTLLDGSP-------------------------APRLKICDFGYSKSSVLHSQPKSTVGTPA  182 (361)
T ss_dssp             HHHHHHHTTCCSCCCCGGGEEECSSS-------------------------SCCEEECCCCCC---------------CT
T ss_pred             HHHHHHHCCcccCCCCHHHEEEcCCC-------------------------CceEEEeecCccccccccCCCCCCcCCCC
Confidence            68999999999999999999995432                         23478888888763222  2233578999


Q ss_pred             cccchhhhcCCCCcc-chhHhHHHHHHHHHhCCCCCCCCChHHHHHHHH-HHhCCCchHHHHHhhHHHHHHhhcCCCCCC
Q 025467           79 YRAPEVILGLGWTYP-CDIWSVGCILVELCTGEALFQTHENLEHLAMME-RVLGPLPQHMLKRVDRHAEKYVRRGRLDWP  156 (252)
Q Consensus        79 y~aPE~l~~~~~~~~-~Diws~G~~l~~l~~g~~pf~~~~~~~~~~~~~-~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~  156 (252)
                      |+|||++.+..+..+ +||||+||++|+|++|..||.+.........+. .+..                    .....+
T Consensus       183 y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~--------------------~~~~~~  242 (361)
T 3uc3_A          183 YIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPRDYRKTIQRILS--------------------VKYSIP  242 (361)
T ss_dssp             TSCHHHHHCSSCCHHHHHHHHHHHHHHHHHHSSCSCC----CCCHHHHHHHHHT--------------------TCCCCC
T ss_pred             cCChhhhcCCCCCCCeeeeehhHHHHHHHHhCCCCCCCCccHHHHHHHHHHHhc--------------------CCCCCC
Confidence            999999998877655 899999999999999999997644321111111 1100                    001111


Q ss_pred             ccccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCCCCCH
Q 025467          157 EGAASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTA  236 (252)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~ta  236 (252)
                      .                                                     ....++++.+||.+||+.||++|||+
T Consensus       243 ~-----------------------------------------------------~~~~s~~~~~li~~~L~~dP~~Rps~  269 (361)
T 3uc3_A          243 D-----------------------------------------------------DIRISPECCHLISRIFVADPATRISI  269 (361)
T ss_dssp             T-----------------------------------------------------TSCCCHHHHHHHHHHSCSCTTTSCCH
T ss_pred             C-----------------------------------------------------cCCCCHHHHHHHHHHccCChhHCcCH
Confidence            0                                                     12345689999999999999999999


Q ss_pred             HHHHcCCCCCCc
Q 025467          237 REALRHPFFTRD  248 (252)
Q Consensus       237 ~e~l~hpwf~~~  248 (252)
                      .|+++||||...
T Consensus       270 ~ell~hp~f~~~  281 (361)
T 3uc3_A          270 PEIKTHSWFLKN  281 (361)
T ss_dssp             HHHHTSHHHHTT
T ss_pred             HHHHhCcchhcC
Confidence            999999999543

>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}

Probab=99.97  E-value=2.7e-31  Score=229.78  Aligned_cols=143  Identities=31%  Similarity=0.453  Sum_probs=111.2

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCC--CccccCCC
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ--NYIVSTRH   78 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~--~~~~~t~~   78 (252)
                      ||+|||++||+||||||+|||++.                           .+.++|+|||++.......  ...+||+.
T Consensus       128 aL~~LH~~givHrDLkp~NIll~~---------------------------~~~vkL~DFG~a~~~~~~~~~~~~~gt~~  180 (476)
T 2y94_A          128 GVDYCHRHMVVHRDLKPENVLLDA---------------------------HMNAKIADFGLSNMMSDGEFLRTSCGSPN  180 (476)
T ss_dssp             HHHHHHTTTEECSCCSGGGEEECT---------------------------TCCEEECCCSSCEECCTTCCBCCCCSCST
T ss_pred             HHHHHHHCCCCcccccHHHEEEec---------------------------CCCeEEEeccchhhccccccccccCCCcC
Confidence            689999999999999999999943                           4457788888776543322  23578999


Q ss_pred             cccchhhhcCCC-CccchhHhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHHHHHHhhcCCCCCCc
Q 025467           79 YRAPEVILGLGW-TYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPE  157 (252)
Q Consensus        79 y~aPE~l~~~~~-~~~~Diws~G~~l~~l~~g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~  157 (252)
                      |+|||++.+..+ +.++||||+||++|+|++|..||.+.+.......+..                       +....+ 
T Consensus       181 y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~-----------------------~~~~~p-  236 (476)
T 2y94_A          181 YAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDHVPTLFKKICD-----------------------GIFYTP-  236 (476)
T ss_dssp             TCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSSCCSSSHHHHHHHHT-----------------------TCCCCC-
T ss_pred             eEChhhccCCCCCCCcceehhhHHHHHHHhhCCCCCCCCCHHHHHHHHhc-----------------------CCcCCC-
Confidence            999999988765 6899999999999999999999987655443332211                       111111 


Q ss_pred             cccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCCCCCHH
Q 025467          158 GAASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAR  237 (252)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~ta~  237 (252)
                                                                            ...+.++.+||.+||+.||.+|||++
T Consensus       237 ------------------------------------------------------~~~s~~~~~Li~~~L~~dP~~Rpt~~  262 (476)
T 2y94_A          237 ------------------------------------------------------QYLNPSVISLLKHMLQVDPMKRATIK  262 (476)
T ss_dssp             ------------------------------------------------------TTCCHHHHHHHHHHTCSSTTTSCCHH
T ss_pred             ------------------------------------------------------ccCCHHHHHHHHHHcCCCchhCcCHH
Confidence                                                                  12346889999999999999999999


Q ss_pred             HHHcCCCCCCc
Q 025467          238 EALRHPFFTRD  248 (252)
Q Consensus       238 e~l~hpwf~~~  248 (252)
                      |+++||||+..
T Consensus       263 eil~hp~~~~~  273 (476)
T 2y94_A          263 DIREHEWFKQD  273 (476)
T ss_dssp             HHHTCHHHHTT
T ss_pred             HHHhCHHhhhc
Confidence            99999999764

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*

Probab=99.97  E-value=4.7e-31  Score=229.59  Aligned_cols=149  Identities=34%  Similarity=0.558  Sum_probs=115.1

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCC--CccccCCC
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ--NYIVSTRH   78 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~--~~~~~t~~   78 (252)
                      ||+|||++||+||||||+|||+...+                        ....++|+|||++.......  ...+||+.
T Consensus       133 al~~lH~~~ivH~Dlkp~Nil~~~~~------------------------~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~  188 (486)
T 3mwu_A          133 GITYMHKHNIVHRDLKPENILLESKE------------------------KDCDIKIIDFGLSTCFQQNTKMKDRIGTAY  188 (486)
T ss_dssp             HHHHHHHTTCCCSCCSGGGEEESSSS------------------------TTCCEEECSCSCTTTBCCC----CCTTGGG
T ss_pred             HHHHHHHCCeEeccCchHHEEEecCC------------------------CCCCEEEEECCcCeECCCCCccCCCcCCCC
Confidence            68999999999999999999995432                        23468899999886543322  23578999


Q ss_pred             cccchhhhcCCCCccchhHhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHHHHHHhhcCCCCCCcc
Q 025467           79 YRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEG  158 (252)
Q Consensus        79 y~aPE~l~~~~~~~~~Diws~G~~l~~l~~g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~  158 (252)
                      |+|||++.+ .|+.++||||+||++|+|++|..||.+.+..+.+..+.......                       +  
T Consensus       189 y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~-----------------------~--  242 (486)
T 3mwu_A          189 YIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAF-----------------------D--  242 (486)
T ss_dssp             GCCGGGGGS-CCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCS-----------------------C--
T ss_pred             CCCHHHhCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCC-----------------------C--
Confidence            999999876 58999999999999999999999998877665554433211110                       0  


Q ss_pred             ccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCCCCCHHH
Q 025467          159 AASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTARE  238 (252)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~ta~e  238 (252)
                                                                       ...+...++++.+||.+||+.||.+||||.+
T Consensus       243 -------------------------------------------------~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~  273 (486)
T 3mwu_A          243 -------------------------------------------------LPQWRTISDDAKDLIRKMLTFHPSLRITATQ  273 (486)
T ss_dssp             -------------------------------------------------SGGGGGSCHHHHHHHHHHTCSSTTTSCCHHH
T ss_pred             -------------------------------------------------CcccCCCCHHHHHHHHHHcCCChhhCcCHHH
Confidence                                                             0112335678999999999999999999999


Q ss_pred             HHcCCCCCCc
Q 025467          239 ALRHPFFTRD  248 (252)
Q Consensus       239 ~l~hpwf~~~  248 (252)
                      +|+||||+..
T Consensus       274 ~l~hp~~~~~  283 (486)
T 3mwu_A          274 CLEHPWIQKY  283 (486)
T ss_dssp             HHHCHHHHHT
T ss_pred             HhcCHhhccC
Confidence            9999999754

>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}

Probab=99.97  E-value=6.7e-31  Score=221.67  Aligned_cols=146  Identities=21%  Similarity=0.466  Sum_probs=109.2

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCC--CCccccCCC
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD--QNYIVSTRH   78 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~--~~~~~~t~~   78 (252)
                      ||+|||++||+||||||+|||++                           ..+.++|+|||++......  ....+||+.
T Consensus       127 aL~~LH~~givHrDlkp~NIll~---------------------------~~g~vkL~DFG~a~~~~~~~~~~~~~gt~~  179 (384)
T 4fr4_A          127 ALDYLQNQRIIHRDMKPDNILLD---------------------------EHGHVHITDFNIAAMLPRETQITTMAGTKP  179 (384)
T ss_dssp             HHHHHHHTTEECCCCSGGGEEEC---------------------------TTSCEEECCCTTCEECCTTCCBCCCCSCGG
T ss_pred             HHHHHHHCCceeccCcHHHeEEC---------------------------CCCCEEEeccceeeeccCCCceeccCCCcc
Confidence            68999999999999999999994                           4456778888877654332  233579999


Q ss_pred             cccchhhhc---CCCCccchhHhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHHHHHHhhcCCCCC
Q 025467           79 YRAPEVILG---LGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDW  155 (252)
Q Consensus        79 y~aPE~l~~---~~~~~~~Diws~G~~l~~l~~g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~  155 (252)
                      |+|||++..   ..|+.++||||+||++|+|++|..||...........+...                    ......+
T Consensus       180 Y~aPE~~~~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~~~~~~~~--------------------~~~~~~~  239 (384)
T 4fr4_A          180 YMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTSSKEIVHTF--------------------ETTVVTY  239 (384)
T ss_dssp             GCCGGGTCCCSSCCBCTTHHHHHHHHHHHHHHHSSCSSCCCTTSCHHHHHHHH--------------------HHCCCCC
T ss_pred             ccCCeeeccCCCCCCCccceeechHHHHHHHHhCCCCCCCCCCccHHHHHHHH--------------------hhcccCC
Confidence            999999974   35889999999999999999999999754322111111000                    0011111


Q ss_pred             CccccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCCCCC
Q 025467          156 PEGAASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLT  235 (252)
Q Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~t  235 (252)
                      +                                                       ...+.++.+||.+||+.||.+|||
T Consensus       240 p-------------------------------------------------------~~~s~~~~~li~~lL~~dP~~R~s  264 (384)
T 4fr4_A          240 P-------------------------------------------------------SAWSQEMVSLLKKLLEPNPDQRFS  264 (384)
T ss_dssp             C-------------------------------------------------------TTSCHHHHHHHHHHSCSSGGGSCC
T ss_pred             C-------------------------------------------------------CcCCHHHHHHHHHHhcCCHhHhcc
Confidence            1                                                       224568999999999999999998


Q ss_pred             -HHHHHcCCCCCCc
Q 025467          236 -AREALRHPFFTRD  248 (252)
Q Consensus       236 -a~e~l~hpwf~~~  248 (252)
                       ++++++||||+..
T Consensus       265 ~~~~l~~hp~f~~~  278 (384)
T 4fr4_A          265 QLSDVQNFPYMNDI  278 (384)
T ss_dssp             SHHHHHTSGGGTTC
T ss_pred             cHHHHHcChhhhcC
Confidence             9999999999875

>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A

Probab=99.97  E-value=1.1e-31  Score=222.16  Aligned_cols=158  Identities=30%  Similarity=0.565  Sum_probs=96.0

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCC---CccccCC
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ---NYIVSTR   77 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~---~~~~~t~   77 (252)
                      ||+|||++||+||||||+|||+..++                        ....++|+|||.+.......   ...+||+
T Consensus       118 ~l~~LH~~~ivH~Dlkp~NIll~~~~------------------------~~~~~kl~Dfg~a~~~~~~~~~~~~~~~t~  173 (325)
T 3kn6_A          118 AVSHMHDVGVVHRDLKPENLLFTDEN------------------------DNLEIKIIDFGFARLKPPDNQPLKTPCFTL  173 (325)
T ss_dssp             HHHHHHHTTEECCCCCGGGEEEEC----------------------------CEEEECCCTTCEECCC------------
T ss_pred             HHHHHHHCCCeecCCCHHHEEEecCC------------------------CcccEEEeccccceecCCCCCcccccCCCc
Confidence            68999999999999999999996532                        22357888888886543322   2346799


Q ss_pred             CcccchhhhcCCCCccchhHhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHHHHHHhhcCCCCCCc
Q 025467           78 HYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPE  157 (252)
Q Consensus        78 ~y~aPE~l~~~~~~~~~Diws~G~~l~~l~~g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~  157 (252)
                      .|+|||++.+..++.++||||+||++|+|++|..||.+.+....        .....+...        ....+....+ 
T Consensus       174 ~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~--------~~~~~~~~~--------~i~~~~~~~~-  236 (325)
T 3kn6_A          174 HYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLT--------CTSAVEIMK--------KIKKGDFSFE-  236 (325)
T ss_dssp             ----------CCCCHHHHHHHHHHHHHHHHHSSCTTC---------------CCCHHHHHH--------HHTTTCCCCC-
T ss_pred             CccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCccccc--------cccHHHHHH--------HHHcCCCCCC-
Confidence            99999999988999999999999999999999999976432110        000000000        0111111111 


Q ss_pred             cccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCCCCCHH
Q 025467          158 GAASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAR  237 (252)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~ta~  237 (252)
                                                                        ...+...++++.+||.+||+.||.+|||++
T Consensus       237 --------------------------------------------------~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~  266 (325)
T 3kn6_A          237 --------------------------------------------------GEAWKNVSQEAKDLIQGLLTVDPNKRLKMS  266 (325)
T ss_dssp             --------------------------------------------------SHHHHTSCHHHHHHHHHHHCCCTTTCCCTT
T ss_pred             --------------------------------------------------cccccCCCHHHHHHHHHHCCCChhHCCCHH
Confidence                                                              011134567899999999999999999999


Q ss_pred             HHHcCCCCCCcc
Q 025467          238 EALRHPFFTRDH  249 (252)
Q Consensus       238 e~l~hpwf~~~~  249 (252)
                      |+++||||+...
T Consensus       267 ell~h~w~~~~~  278 (325)
T 3kn6_A          267 GLRYNEWLQDGS  278 (325)
T ss_dssp             TSTTCGGGCTTC
T ss_pred             HHhcChhhccCc
Confidence            999999998753

>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}

Probab=99.97  E-value=4.7e-31  Score=217.18  Aligned_cols=175  Identities=27%  Similarity=0.505  Sum_probs=123.6

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCC------CCccc
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD------QNYIV   74 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~------~~~~~   74 (252)
                      ||+|||++||+||||||+||+++.+                          ...++|+|||.+......      .....
T Consensus       132 ~l~~lH~~~i~H~dlkp~Nil~~~~--------------------------~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~  185 (320)
T 2i6l_A          132 GLKYIHSANVLHRDLKPANLFINTE--------------------------DLVLKIGDFGLARIMDPHYSHKGHLSEGL  185 (320)
T ss_dssp             HHHHHHHTTCBCCCCSGGGEEEETT--------------------------TTEEEECCCTTCBCC--------CCCGGG
T ss_pred             HHHHHHhCCEecCCCCHHHEEEcCC--------------------------CCeEEEccCccccccCCCccccccccccc
Confidence            6899999999999999999999532                          234677777766543221      12235


Q ss_pred             cCCCcccchhhhc-CCCCccchhHhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHHHHHHhhcCCC
Q 025467           75 STRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRL  153 (252)
Q Consensus        75 ~t~~y~aPE~l~~-~~~~~~~Diws~G~~l~~l~~g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~  153 (252)
                      ++..|+|||.+.+ ..++.++||||+||++|++++|..||.+.........+....+................+......
T Consensus       186 ~~~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  265 (320)
T 2i6l_A          186 VTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELEQMQLILESIPVVHEEDRQELLSVIPVYIRNDMT  265 (320)
T ss_dssp             SCCTTCCHHHHHCTTCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHSCCCCHHHHHHHHTTSCHHHHHHTT
T ss_pred             ccccccCcHHhcCcccCCchhhhHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCchhhhhhhhhcCccccccccc
Confidence            6889999999876 578999999999999999999999999988877777777776665554433322111111100000


Q ss_pred             CCCccccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCCC
Q 025467          154 DWPEGAASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDR  233 (252)
Q Consensus       154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R  233 (252)
                                       .+.                               ..........+.++.+||.+||+.||++|
T Consensus       266 -----------------~~~-------------------------------~~~~~~~~~~~~~~~~li~~~L~~dP~~R  297 (320)
T 2i6l_A          266 -----------------EPH-------------------------------KPLTQLLPGISREAVDFLEQILTFSPMDR  297 (320)
T ss_dssp             -----------------SCC-------------------------------CCHHHHSTTCCHHHHHHHHTTSCSSGGGS
T ss_pred             -----------------CCC-------------------------------CChhHhcchhhHHHHHHHHHHcCCCcccc
Confidence                             000                               00011123456789999999999999999


Q ss_pred             CCHHHHHcCCCCCCcc
Q 025467          234 LTAREALRHPFFTRDH  249 (252)
Q Consensus       234 ~ta~e~l~hpwf~~~~  249 (252)
                      ||++|+|+||||+...
T Consensus       298 pt~~ell~hp~~~~~~  313 (320)
T 2i6l_A          298 LTAEEALSHPYMSIYS  313 (320)
T ss_dssp             CCHHHHHTSHHHHTTC
T ss_pred             CCHHHHhCCccccccc
Confidence            9999999999998754

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*

Probab=99.97  E-value=4.4e-31  Score=230.19  Aligned_cols=148  Identities=31%  Similarity=0.527  Sum_probs=115.1

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCC--CccccCCC
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ--NYIVSTRH   78 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~--~~~~~t~~   78 (252)
                      ||+|||++||+||||||+|||+...+                        ....++|+|||++.......  ...+||+.
T Consensus       148 ~l~~lH~~~ivH~Dlkp~Nil~~~~~------------------------~~~~~kl~DfG~a~~~~~~~~~~~~~gt~~  203 (494)
T 3lij_A          148 GVTYLHKHNIVHRDLKPENLLLESKE------------------------KDALIKIVDFGLSAVFENQKKMKERLGTAY  203 (494)
T ss_dssp             HHHHHHHTTEECSCCSGGGEEESCSS------------------------TTCCEEECCCTTCEECBTTBCBCCCCSCTT
T ss_pred             HHHHHHHCCceeccCChhhEEEeCCC------------------------CCCcEEEEECCCCeECCCCccccccCCCcC
Confidence            68999999999999999999995432                        23458899999886543322  23578999


Q ss_pred             cccchhhhcCCCCccchhHhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHHHHHHhhcCCCCCCcc
Q 025467           79 YRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEG  158 (252)
Q Consensus        79 y~aPE~l~~~~~~~~~Diws~G~~l~~l~~g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~  158 (252)
                      |+|||++. ..|+.++||||+||++|+|++|..||.+.+..+.+..+.......+                       . 
T Consensus       204 y~aPE~l~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~-----------------------~-  258 (494)
T 3lij_A          204 YIAPEVLR-KKYDEKCDVWSIGVILFILLAGYPPFGGQTDQEILRKVEKGKYTFD-----------------------S-  258 (494)
T ss_dssp             TCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCC-----------------------S-
T ss_pred             eeCHHHHc-ccCCCchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCC-----------------------c-
Confidence            99999986 4689999999999999999999999988776555544433211110                       0 


Q ss_pred             ccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCCCCCHHH
Q 025467          159 AASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTARE  238 (252)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~ta~e  238 (252)
                                                                        ..+...++.+.+||.+||+.||.+|||+.|
T Consensus       259 --------------------------------------------------~~~~~~s~~~~~li~~~L~~dp~~R~s~~e  288 (494)
T 3lij_A          259 --------------------------------------------------PEWKNVSEGAKDLIKQMLQFDSQRRISAQQ  288 (494)
T ss_dssp             --------------------------------------------------GGGTTSCHHHHHHHHHHTCSSTTTSCCHHH
T ss_pred             --------------------------------------------------hhcccCCHHHHHHHHHHCCCChhhCccHHH
Confidence                                                              012335678999999999999999999999


Q ss_pred             HHcCCCCCC
Q 025467          239 ALRHPFFTR  247 (252)
Q Consensus       239 ~l~hpwf~~  247 (252)
                      +|+||||+.
T Consensus       289 ~l~hp~~~~  297 (494)
T 3lij_A          289 ALEHPWIKE  297 (494)
T ss_dssp             HHTCHHHHH
T ss_pred             HhcCccccc
Confidence            999999975

>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}

Probab=99.97  E-value=3.8e-31  Score=220.28  Aligned_cols=150  Identities=25%  Similarity=0.361  Sum_probs=113.1

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCC-------CCcc
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD-------QNYI   73 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~-------~~~~   73 (252)
                      ||+|||++||+||||||+||+++.++                         ...++|+|||.+......       ....
T Consensus       180 ~l~~LH~~~ivH~Dlkp~NIll~~~~-------------------------~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~  234 (345)
T 3hko_A          180 ALHYLHNQGICHRDIKPENFLFSTNK-------------------------SFEIKLVDFGLSKEFYKLNNGEYYGMTTK  234 (345)
T ss_dssp             HHHHHHHTTEECCCCCGGGEEESCSS-------------------------SCCEEECCCTTCEEGGGTTCC--------
T ss_pred             HHHHHHHCCccccCCChhhEEEecCC-------------------------CceEEEeeccccccccccCcccccccccc
Confidence            68999999999999999999995432                         235788888887643211       1234


Q ss_pred             ccCCCcccchhhhc--CCCCccchhHhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHHHHHHhhcC
Q 025467           74 VSTRHYRAPEVILG--LGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRG  151 (252)
Q Consensus        74 ~~t~~y~aPE~l~~--~~~~~~~Diws~G~~l~~l~~g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~  151 (252)
                      .||+.|+|||++.+  ..++.++||||+||++|+|++|..||.+....+....+.......+                  
T Consensus       235 ~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~------------------  296 (345)
T 3hko_A          235 AGTPYFVAPEVLNTTNESYGPKCDAWSAGVLLHLLLMGAVPFPGVNDADTISQVLNKKLCFE------------------  296 (345)
T ss_dssp             CCCGGGCCHHHHTCSSSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCTT------------------
T ss_pred             CCCccccCchhhccCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCChHHHHHHHHhcccccC------------------
Confidence            68999999999975  5688999999999999999999999988776655544332111110                  


Q ss_pred             CCCCCccccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCC
Q 025467          152 RLDWPEGAASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPT  231 (252)
Q Consensus       152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~  231 (252)
                         .                                                     ......+.++.+||.+||+.||.
T Consensus       297 ---~-----------------------------------------------------~~~~~~~~~~~~li~~~l~~~p~  320 (345)
T 3hko_A          297 ---N-----------------------------------------------------PNYNVLSPLARDLLSNLLNRNVD  320 (345)
T ss_dssp             ---S-----------------------------------------------------GGGGGSCHHHHHHHHHHSCSCTT
T ss_pred             ---C-----------------------------------------------------cccccCCHHHHHHHHHHcCCChh
Confidence               0                                                     00122456899999999999999


Q ss_pred             CCCCHHHHHcCCCCCCcc
Q 025467          232 DRLTAREALRHPFFTRDH  249 (252)
Q Consensus       232 ~R~ta~e~l~hpwf~~~~  249 (252)
                      +|||+.++|+||||+...
T Consensus       321 ~Rps~~~~l~hp~~~~~~  338 (345)
T 3hko_A          321 ERFDAMRALQHPWISQFS  338 (345)
T ss_dssp             TSCCHHHHHHSHHHHTTS
T ss_pred             HCCCHHHHhcChhhccCh
Confidence            999999999999998764

>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*

Probab=99.97  E-value=7.2e-31  Score=212.18  Aligned_cols=149  Identities=30%  Similarity=0.485  Sum_probs=115.0

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCC--CccccCCC
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ--NYIVSTRH   78 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~--~~~~~t~~   78 (252)
                      ||+|||++||+||||||+||++..+                        .....++|+|||.+.......  ....||+.
T Consensus       118 ~l~~lH~~~i~H~dlkp~Nil~~~~------------------------~~~~~~~l~Dfg~~~~~~~~~~~~~~~~t~~  173 (277)
T 3f3z_A          118 AVAYCHKLNVAHRDLKPENFLFLTD------------------------SPDSPLKLIDFGLAARFKPGKMMRTKVGTPY  173 (277)
T ss_dssp             HHHHHHHTTEECCCCSGGGEEESSS------------------------STTCCEEECCCTTCEECCTTSCBCCCCSCTT
T ss_pred             HHHHHHHCCccCCCCCHHHEEEecC------------------------CCCCcEEEEecccceeccCccchhccCCCCC
Confidence            6899999999999999999999432                        234467888888876543322  23478999


Q ss_pred             cccchhhhcCCCCccchhHhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHHHHHHhhcCCCCCCcc
Q 025467           79 YRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEG  158 (252)
Q Consensus        79 y~aPE~l~~~~~~~~~Diws~G~~l~~l~~g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~  158 (252)
                      |+|||++.+ .++.++||||+||++|++++|..||.+.+..+....+.......|...                      
T Consensus       174 y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~----------------------  230 (277)
T 3f3z_A          174 YVSPQVLEG-LYGPECDEWSAGVMMYVLLCGYPPFSAPTDSEVMLKIREGTFTFPEKD----------------------  230 (277)
T ss_dssp             TCCHHHHTT-CBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCHHH----------------------
T ss_pred             ccChHHhcc-cCCchhhehhHHHHHHHHHHCCCCCCCCCHHHHHHHHHhCCCCCCchh----------------------
Confidence            999999865 488999999999999999999999988776655554433222222110                      


Q ss_pred             ccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCCCCCHHH
Q 025467          159 AASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTARE  238 (252)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~ta~e  238 (252)
                                                                          +...++++.+|+.+||+.||.+|||+.+
T Consensus       231 ----------------------------------------------------~~~~~~~~~~li~~~l~~dp~~R~s~~~  258 (277)
T 3f3z_A          231 ----------------------------------------------------WLNVSPQAESLIRRLLTKSPKQRITSLQ  258 (277)
T ss_dssp             ----------------------------------------------------HTTSCHHHHHHHHHHTCSSTTTSCCHHH
T ss_pred             ----------------------------------------------------hhcCCHHHHHHHHHHccCChhhCcCHHH
Confidence                                                                1234568999999999999999999999


Q ss_pred             HHcCCCCCCc
Q 025467          239 ALRHPFFTRD  248 (252)
Q Consensus       239 ~l~hpwf~~~  248 (252)
                      +|+||||+..
T Consensus       259 ~l~h~~~~~~  268 (277)
T 3f3z_A          259 ALEHEWFEKQ  268 (277)
T ss_dssp             HTTSHHHHHH
T ss_pred             HhcCHHHhcc
Confidence            9999999753

>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...

Probab=99.97  E-value=2.9e-31  Score=215.34  Aligned_cols=145  Identities=27%  Similarity=0.479  Sum_probs=112.2

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCC-CCccccCCCc
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD-QNYIVSTRHY   79 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~-~~~~~~t~~y   79 (252)
                      ||+|||++||+||||||+||+++.                           .+.++|+|||.+...... .....|++.|
T Consensus       126 ~l~~lH~~~i~H~dl~p~Nil~~~---------------------------~~~~kl~Dfg~~~~~~~~~~~~~~~~~~y  178 (284)
T 2vgo_A          126 ALHYCHERKVIHRDIKPENLLMGY---------------------------KGELKIADFGWSVHAPSLRRRTMCGTLDY  178 (284)
T ss_dssp             HHHHHHTTTEECCCCSGGGEEECT---------------------------TCCEEECCCTTCEECSSSCBCCCCSCGGG
T ss_pred             HHHHHHHCCceecCCCHHHEEEcC---------------------------CCCEEEecccccccCcccccccccCCCCc
Confidence            689999999999999999999954                           345677777776543322 2234688999


Q ss_pred             ccchhhhcCCCCccchhHhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHHHHHHhhcCCCCCCccc
Q 025467           80 RAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGA  159 (252)
Q Consensus        80 ~aPE~l~~~~~~~~~Diws~G~~l~~l~~g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~  159 (252)
                      +|||++.+..++.++||||+||++|++++|..||......+....+...                       ....+   
T Consensus       179 ~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~-----------------------~~~~~---  232 (284)
T 2vgo_A          179 LPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNV-----------------------DLKFP---  232 (284)
T ss_dssp             CCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTT-----------------------CCCCC---
T ss_pred             CCHHHhccCCCCcccchhhHHHHHHHHHHCCCCCCCCCHhHHHHHHhcc-----------------------ccCCC---
Confidence            9999999888999999999999999999999999876654433322111                       01111   


Q ss_pred             cchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCCCCCHHHH
Q 025467          160 ASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREA  239 (252)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~ta~e~  239 (252)
                                                                          ...+.++.+||.+||+.||.+|||++++
T Consensus       233 ----------------------------------------------------~~~~~~~~~li~~~l~~~p~~Rps~~~l  260 (284)
T 2vgo_A          233 ----------------------------------------------------PFLSDGSKDLISKLLRYHPPQRLPLKGV  260 (284)
T ss_dssp             ----------------------------------------------------TTSCHHHHHHHHHHSCSSGGGSCCHHHH
T ss_pred             ----------------------------------------------------CcCCHHHHHHHHHHhhcCHhhCCCHHHH
Confidence                                                                1234688999999999999999999999


Q ss_pred             HcCCCCCCccc
Q 025467          240 LRHPFFTRDHL  250 (252)
Q Consensus       240 l~hpwf~~~~~  250 (252)
                      ++||||+....
T Consensus       261 l~h~~~~~~~~  271 (284)
T 2vgo_A          261 MEHPWVKANSR  271 (284)
T ss_dssp             HTCHHHHHHCC
T ss_pred             hhCHHHHhhcc
Confidence            99999986543

>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}

Probab=99.97  E-value=4.7e-31  Score=224.54  Aligned_cols=147  Identities=28%  Similarity=0.445  Sum_probs=111.4

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCC----CccccC
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ----NYIVST   76 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~----~~~~~t   76 (252)
                      ||+|||++||+||||||+|||++                           ..+.+||+|||+++......    ...+||
T Consensus       174 aL~~LH~~giiHrDLKp~NILld---------------------------~~g~vkL~DFGla~~~~~~~~~~~~~~~Gt  226 (412)
T 2vd5_A          174 AIDSVHRLGYVHRDIKPDNILLD---------------------------RCGHIRLADFGSCLKLRADGTVRSLVAVGT  226 (412)
T ss_dssp             HHHHHHHTTEECCCCSGGGEEEC---------------------------TTSCEEECCCTTCEECCTTSCEECSSCCSC
T ss_pred             HHHHHHHCCeeecccCHHHeeec---------------------------CCCCEEEeechhheeccCCCccccceeccc
Confidence            68999999999999999999994                           44567777777776543322    234799


Q ss_pred             CCcccchhhh-------cCCCCccchhHhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHHHHHHhh
Q 025467           77 RHYRAPEVIL-------GLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVR  149 (252)
Q Consensus        77 ~~y~aPE~l~-------~~~~~~~~Diws~G~~l~~l~~g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~  149 (252)
                      +.|+|||++.       ...|+.++|+||+||++|+|++|..||.+.+..+....+......                  
T Consensus       227 ~~Y~APE~l~~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~i~~~~~~------------------  288 (412)
T 2vd5_A          227 PDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADSTAETYGKIVHYKEH------------------  288 (412)
T ss_dssp             GGGCCHHHHHHHHTCTTCSEECTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTHHHH------------------
T ss_pred             cCcCCHHHHhhcccCcCCCCCChHHhhhHHhHHHHHHHhCCCCCCCCCHHHHHHHHHhcccC------------------
Confidence            9999999997       346889999999999999999999999887765555444321100                  


Q ss_pred             cCCCCCCccccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCC
Q 025467          150 RGRLDWPEGAASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYD  229 (252)
Q Consensus       150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~d  229 (252)
                         +..+                                                    ......+.++++||.+||+ +
T Consensus       289 ---~~~p----------------------------------------------------~~~~~~s~~~~dli~~lL~-~  312 (412)
T 2vd5_A          289 ---LSLP----------------------------------------------------LVDEGVPEEARDFIQRLLC-P  312 (412)
T ss_dssp             ---CCCC--------------------------------------------------------CCCHHHHHHHHTTSS-C
T ss_pred             ---cCCC----------------------------------------------------ccccCCCHHHHHHHHHHcC-C
Confidence               0000                                                    0012346789999999999 9


Q ss_pred             CCCC---CCHHHHHcCCCCCCc
Q 025467          230 PTDR---LTAREALRHPFFTRD  248 (252)
Q Consensus       230 P~~R---~ta~e~l~hpwf~~~  248 (252)
                      |.+|   +|++|+++||||+..
T Consensus       313 p~~Rlgr~~~~ei~~Hpff~~i  334 (412)
T 2vd5_A          313 PETRLGRGGAGDFRTHPFFFGL  334 (412)
T ss_dssp             GGGCTTTTTHHHHHTSGGGTTC
T ss_pred             hhhcCCCCCHHHHhcCCCcCCC
Confidence            9998   599999999999875

>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A

Probab=99.97  E-value=2.3e-31  Score=227.42  Aligned_cols=153  Identities=33%  Similarity=0.531  Sum_probs=108.0

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCC--CccccCCC
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ--NYIVSTRH   78 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~--~~~~~t~~   78 (252)
                      ||+|||++||+||||||+|||++..+                        ....++|+|||.+.......  ...+||+.
T Consensus       251 ~l~~LH~~~ivHrDlkp~NIll~~~~------------------------~~~~~kl~DFG~a~~~~~~~~~~~~~gt~~  306 (419)
T 3i6u_A          251 AVQYLHENGIIHRDLKPENVLLSSQE------------------------EDCLIKITDFGHSKILGETSLMRTLCGTPT  306 (419)
T ss_dssp             HHHHHHHTTCCCSCCCGGGEEESSSS------------------------SSCCEEECCSSTTTSCC-----------CT
T ss_pred             HHHHHHHCCccccCCChHhEEEecCC------------------------CcceEEEeecccceecCCCccccccCCCCC
Confidence            68999999999999999999995432                        23357888888887654332  23578999


Q ss_pred             cccchhhhc---CCCCccchhHhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHHHHHHhhcCCCCC
Q 025467           79 YRAPEVILG---LGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDW  155 (252)
Q Consensus        79 y~aPE~l~~---~~~~~~~Diws~G~~l~~l~~g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~  155 (252)
                      |+|||++.+   ..++.++||||+||++|+|++|..||........+....                      ..+....
T Consensus       307 y~aPE~~~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~i----------------------~~~~~~~  364 (419)
T 3i6u_A          307 YLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQI----------------------TSGKYNF  364 (419)
T ss_dssp             TCCTTTTC----CTTHHHHHHHHHHHHHHHHHHSSCSSCCCSSSCCHHHHH----------------------HTTCCCC
T ss_pred             ccCceeeecCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCcchHHHHHHH----------------------hcCCCCC
Confidence            999999864   567889999999999999999999997643221111110                      0111100


Q ss_pred             CccccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCCCCC
Q 025467          156 PEGAASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLT  235 (252)
Q Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~t  235 (252)
                      .                                                   ...+...++.+.+||.+||++||.+|||
T Consensus       365 ~---------------------------------------------------~~~~~~~~~~~~~li~~~L~~dP~~Rps  393 (419)
T 3i6u_A          365 I---------------------------------------------------PEVWAEVSEKALDLVKKLLVVDPKARFT  393 (419)
T ss_dssp             C---------------------------------------------------HHHHTTSCHHHHHHHHHHSCSSTTTSCC
T ss_pred             C---------------------------------------------------chhhcccCHHHHHHHHHHccCChhHCcC
Confidence            0                                                   0112345678999999999999999999


Q ss_pred             HHHHHcCCCCCCccc
Q 025467          236 AREALRHPFFTRDHL  250 (252)
Q Consensus       236 a~e~l~hpwf~~~~~  250 (252)
                      ++|+|+||||++...
T Consensus       394 ~~e~l~hp~~~~~~~  408 (419)
T 3i6u_A          394 TEEALRHPWLQDEDM  408 (419)
T ss_dssp             HHHHHHSGGGCCHHH
T ss_pred             HHHHhCCcccCChhH
Confidence            999999999987654

>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A

Probab=99.97  E-value=9e-31  Score=215.48  Aligned_cols=166  Identities=25%  Similarity=0.381  Sum_probs=105.2

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCC----------C
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD----------Q   70 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~----------~   70 (252)
                      ||+|||++||+||||||+|||++.++.                        ...++|+|||++......          .
T Consensus       123 ~l~~lH~~~ivH~dlkp~Nil~~~~~~------------------------~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~  178 (316)
T 2ac3_A          123 ALDFLHNKGIAHRDLKPENILCEHPNQ------------------------VSPVKICDFDLGSGIKLNGDCSPISTPEL  178 (316)
T ss_dssp             HHHHHHHTTCCCCCCCGGGEEESCSSS------------------------SCSEEECCTTCCC----------------
T ss_pred             HHHHHHhCCceeCCCCHHHEEEccCCC------------------------cCceEEEEccCccccccCCcccccccccc
Confidence            689999999999999999999965432                        123677777766532211          1


Q ss_pred             CccccCCCcccchhhhc-----CCCCccchhHhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHHHH
Q 025467           71 NYIVSTRHYRAPEVILG-----LGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAE  145 (252)
Q Consensus        71 ~~~~~t~~y~aPE~l~~-----~~~~~~~Diws~G~~l~~l~~g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~  145 (252)
                      ...+||+.|+|||++.+     ..++.++||||+||++|+|++|..||.+....+.....   ....+. .    .....
T Consensus       179 ~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~---~~~~~~-~----~~~~~  250 (316)
T 2ac3_A          179 LTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDR---GEACPA-C----QNMLF  250 (316)
T ss_dssp             ---CCSGGGCCHHHHHHTSHHHHHHTTTHHHHHHHHHHHHHHHSSCSCCCCCCSCSCC-------CCHH-H----HHHHH
T ss_pred             ccccCCcCccChHHhhcccccccCCCcccccHhHHHHHHHHHHCCCCCcccccccccccc---cccchh-H----HHHHH
Confidence            12358999999999975     45788999999999999999999999765321100000   000000 0    00000


Q ss_pred             HHhhcCCCCCCccccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHh
Q 025467          146 KYVRRGRLDWPEGAASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGL  225 (252)
Q Consensus       146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~  225 (252)
                      .....+....+.                                                   ..+...+.++.+||.+|
T Consensus       251 ~~i~~~~~~~~~---------------------------------------------------~~~~~~~~~~~~li~~~  279 (316)
T 2ac3_A          251 ESIQEGKYEFPD---------------------------------------------------KDWAHISCAAKDLISKL  279 (316)
T ss_dssp             HHHHHCCCCCCH---------------------------------------------------HHHTTSCHHHHHHHHHH
T ss_pred             HHHhccCcccCc---------------------------------------------------hhcccCCHHHHHHHHHH
Confidence            011111111110                                                   01123567899999999


Q ss_pred             ccCCCCCCCCHHHHHcCCCCCCcc
Q 025467          226 LRYDPTDRLTAREALRHPFFTRDH  249 (252)
Q Consensus       226 L~~dP~~R~ta~e~l~hpwf~~~~  249 (252)
                      |+.||.+|||++|+|+||||+...
T Consensus       280 L~~dP~~Rps~~e~l~hp~~~~~~  303 (316)
T 2ac3_A          280 LVRDAKQRLSAAQVLQHPWVQGCA  303 (316)
T ss_dssp             SCSSTTTSCCHHHHHHSTTCC---
T ss_pred             hhCChhhCCCHHHHhcChhhcCCC
Confidence            999999999999999999998753

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*

Probab=99.97  E-value=2.8e-31  Score=230.91  Aligned_cols=149  Identities=32%  Similarity=0.527  Sum_probs=116.0

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCCC--ccccCCC
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQN--YIVSTRH   78 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~~--~~~~t~~   78 (252)
                      ||+|||++||+||||||+|||+...                        .....++|+|||++........  ..+||+.
T Consensus       138 ~l~~lH~~~ivH~Dlkp~Nil~~~~------------------------~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~  193 (484)
T 3nyv_A          138 GITYMHKNKIVHRDLKPENLLLESK------------------------SKDANIRIIDFGLSTHFEASKKMKDKIGTAY  193 (484)
T ss_dssp             HHHHHHHTTCCCSCCCGGGEEESSS------------------------STTCCEEECCTTHHHHBCCCCSHHHHTTGGG
T ss_pred             HHHHHHHCCeeeCCCCHHHEEEecC------------------------CCCCcEEEEeeeeeEEcccccccccCCCCcc
Confidence            6899999999999999999999432                        2345689999998865444332  2478999


Q ss_pred             cccchhhhcCCCCccchhHhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHHHHHHhhcCCCCCCcc
Q 025467           79 YRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEG  158 (252)
Q Consensus        79 y~aPE~l~~~~~~~~~Diws~G~~l~~l~~g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~  158 (252)
                      |+|||++.+ .++.++||||+||++|+|++|..||.+.+..+.+..+.......                       +  
T Consensus       194 y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~-----------------------~--  247 (484)
T 3nyv_A          194 YIAPEVLHG-TYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTF-----------------------E--  247 (484)
T ss_dssp             TCCHHHHHT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCC-----------------------C--
T ss_pred             ccCceeecC-CCCCcceeHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHcCCCCC-----------------------C--
Confidence            999999876 68999999999999999999999999877665554443211110                       0  


Q ss_pred             ccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCCCCCHHH
Q 025467          159 AASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTARE  238 (252)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~ta~e  238 (252)
                                                                       ...+...++++.+||.+||+.||.+|||++|
T Consensus       248 -------------------------------------------------~~~~~~~s~~~~~li~~~L~~dp~~R~s~~e  278 (484)
T 3nyv_A          248 -------------------------------------------------LPQWKKVSESAKDLIRKMLTYVPSMRISARD  278 (484)
T ss_dssp             -------------------------------------------------SGGGGGSCHHHHHHHHHHTCSSGGGSCCHHH
T ss_pred             -------------------------------------------------CcccccCCHHHHHHHHHHCCCChhHCcCHHH
Confidence                                                             0111335678999999999999999999999


Q ss_pred             HHcCCCCCCc
Q 025467          239 ALRHPFFTRD  248 (252)
Q Consensus       239 ~l~hpwf~~~  248 (252)
                      +|+||||+..
T Consensus       279 ~l~h~~~~~~  288 (484)
T 3nyv_A          279 ALDHEWIQTY  288 (484)
T ss_dssp             HHTSHHHHHH
T ss_pred             HhhChhhccc
Confidence            9999999753

>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*

Probab=99.97  E-value=5.1e-31  Score=223.27  Aligned_cols=145  Identities=32%  Similarity=0.589  Sum_probs=104.6

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCC-----Ccccc
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ-----NYIVS   75 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~-----~~~~~   75 (252)
                      ||+|||++||+||||||+|||+. +                           +.+||+|||++.......     ...+|
T Consensus       167 aL~~lH~~~ivHrDlkp~NIll~-~---------------------------~~~kl~DFG~a~~~~~~~~~~~~~~~~g  218 (390)
T 2zmd_A          167 AVHTIHQHGIVHSDLKPANFLIV-D---------------------------GMLKLIDFGIANQMQPDTTSVVKDSQVG  218 (390)
T ss_dssp             HHHHHHTTTCCCCCCCGGGEEES-S---------------------------SCEEECCCSSSCCC---------CCSCC
T ss_pred             HHHHHHHCCeeecCCCHHHEEEE-C---------------------------CeEEEEecCccccccCCCccccCCCCCc
Confidence            68999999999999999999993 2                           346777777776443221     23478


Q ss_pred             CCCcccchhhhc-----------CCCCccchhHhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHHH
Q 025467           76 TRHYRAPEVILG-----------LGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHA  144 (252)
Q Consensus        76 t~~y~aPE~l~~-----------~~~~~~~Diws~G~~l~~l~~g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~  144 (252)
                      |+.|+|||++.+           ..++.++||||+||++|+|++|..||....+..  ..+..+..+.            
T Consensus       219 t~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~--~~~~~~~~~~------------  284 (390)
T 2zmd_A          219 AVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQI--SKLHAIIDPN------------  284 (390)
T ss_dssp             CGGGCCHHHHHCC------------CCHHHHHHHHHHHHHHHHHSSCTTTTCCCHH--HHHHHHHCTT------------
T ss_pred             CCCccChHHhhhccccccccccccCCCChhhHHHHHHHHHHHHHCCCcchhhhHHH--HHHHHHhCcc------------
Confidence            999999999975           358899999999999999999999997643321  1111111100            


Q ss_pred             HHHhhcCCCCCCccccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHH
Q 025467          145 EKYVRRGRLDWPEGAASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQG  224 (252)
Q Consensus       145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~  224 (252)
                            ....++                                                       ...+.++.+||.+
T Consensus       285 ------~~~~~~-------------------------------------------------------~~~~~~~~~li~~  303 (390)
T 2zmd_A          285 ------HEIEFP-------------------------------------------------------DIPEKDLQDVLKC  303 (390)
T ss_dssp             ------SCCCCC-------------------------------------------------------CCSCHHHHHHHHH
T ss_pred             ------ccCCCC-------------------------------------------------------ccchHHHHHHHHH
Confidence                  000011                                                       1224588999999


Q ss_pred             hccCCCCCCCCHHHHHcCCCCCCc
Q 025467          225 LLRYDPTDRLTAREALRHPFFTRD  248 (252)
Q Consensus       225 ~L~~dP~~R~ta~e~l~hpwf~~~  248 (252)
                      ||+.||.+|||+.|+|+||||+..
T Consensus       304 ~L~~dP~~Rps~~ell~hp~~~~~  327 (390)
T 2zmd_A          304 CLKRDPKQRISIPELLAHPYVQIQ  327 (390)
T ss_dssp             HTCSSTTTSCCHHHHHTSHHHHSC
T ss_pred             HcccChhhCCCHHHHhhCcCcccc
Confidence            999999999999999999999754

>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}

Probab=99.97  E-value=5.7e-31  Score=219.33  Aligned_cols=145  Identities=32%  Similarity=0.580  Sum_probs=103.6

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCC-----Ccccc
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ-----NYIVS   75 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~-----~~~~~   75 (252)
                      ||+|||++||+||||||+|||++ +                           +.++|+|||++.......     ....|
T Consensus       120 al~~lH~~~iiHrDikp~NIll~-~---------------------------~~~kl~DFG~a~~~~~~~~~~~~~~~~g  171 (343)
T 3dbq_A          120 AVHTIHQHGIVHSDLKPANFLIV-D---------------------------GMLKLIDFGIANQMQPDTTSVVKDSQVG  171 (343)
T ss_dssp             HHHHHHHTTCCCCCCCGGGEEEE-T---------------------------TEEEECCCSSSCCC------------CC
T ss_pred             HHHHHHhCCeecCCCCcceEEEE-C---------------------------CcEEEeecccccccCcccccccCCCCcC
Confidence            68999999999999999999994 2                           246777777776443221     23478


Q ss_pred             CCCcccchhhhc-----------CCCCccchhHhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHHH
Q 025467           76 TRHYRAPEVILG-----------LGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHA  144 (252)
Q Consensus        76 t~~y~aPE~l~~-----------~~~~~~~Diws~G~~l~~l~~g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~  144 (252)
                      |+.|+|||++.+           ..++.++||||+||++|+|++|..||....+..  ..+.....+             
T Consensus       172 t~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~--~~~~~~~~~-------------  236 (343)
T 3dbq_A          172 TVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQI--SKLHAIIDP-------------  236 (343)
T ss_dssp             CCSSCCHHHHHHCC-----------CCHHHHHHHHHHHHHHHHHSSCTTTTCCSHH--HHHHHHHCT-------------
T ss_pred             CcCcCCHHHHhhccccccccccccCCCchhhHHHHHHHHHHHHhCCCcchhhhhHH--HHHHHHhcC-------------
Confidence            999999999975           568899999999999999999999997543321  111111110             


Q ss_pred             HHHhhcCCCCCCccccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHH
Q 025467          145 EKYVRRGRLDWPEGAASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQG  224 (252)
Q Consensus       145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~  224 (252)
                           .....+                                                       ....+.++.+||.+
T Consensus       237 -----~~~~~~-------------------------------------------------------~~~~~~~l~~li~~  256 (343)
T 3dbq_A          237 -----NHEIEF-------------------------------------------------------PDIPEKDLQDVLKC  256 (343)
T ss_dssp             -----TSCCCC-------------------------------------------------------CCCSCHHHHHHHHH
T ss_pred             -----CcccCC-------------------------------------------------------cccCCHHHHHHHHH
Confidence                 000111                                                       12234578999999


Q ss_pred             hccCCCCCCCCHHHHHcCCCCCCc
Q 025467          225 LLRYDPTDRLTAREALRHPFFTRD  248 (252)
Q Consensus       225 ~L~~dP~~R~ta~e~l~hpwf~~~  248 (252)
                      ||+.||.+|||+.|+|+||||+..
T Consensus       257 ~L~~dp~~Rpt~~e~l~hp~~~~~  280 (343)
T 3dbq_A          257 CLKRDPKQRISIPELLAHPYVQIQ  280 (343)
T ss_dssp             HTCSSTTTSCCHHHHHTSHHHHSC
T ss_pred             HcCCChhHCCCHHHHHhCcccccc
Confidence            999999999999999999999753

>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*

Probab=99.97  E-value=2.6e-31  Score=217.47  Aligned_cols=88  Identities=25%  Similarity=0.333  Sum_probs=67.8

Q ss_pred             Chhhhhcc--------CccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCC---
Q 025467            1 MFAVMHDL--------CMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD---   69 (252)
Q Consensus         1 aL~~lH~~--------~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~---   69 (252)
                      ||+|||++        +||||||||+|||++.                           ++.+||+|||+|+.....   
T Consensus       112 gl~ylH~~~~~~~~~~~IiHRDlKp~NILl~~---------------------------~~~~Ki~DFGla~~~~~~~~~  164 (303)
T 3hmm_A          112 GLAHLHMEIVGTQGKPAIAHRDLKSKNILVKK---------------------------NGTCCIADLGLAVRHDSATDT  164 (303)
T ss_dssp             HHHHHHCCBCSTTCBCCEECSCCCGGGEEECT---------------------------TSCEEECCCTTCEEEETTTTE
T ss_pred             HHHHHHHhhhhccCCCCEeeccCCcccEEECC---------------------------CCCEEEEeCCCCccccCCCCc
Confidence            68999987        8999999999999944                           455777777776543221   


Q ss_pred             ----CCccccCCCcccchhhhcC------CCCccchhHhHHHHHHHHHhCCCCCCC
Q 025467           70 ----QNYIVSTRHYRAPEVILGL------GWTYPCDIWSVGCILVELCTGEALFQT  115 (252)
Q Consensus        70 ----~~~~~~t~~y~aPE~l~~~------~~~~~~Diws~G~~l~~l~~g~~pf~~  115 (252)
                          ....+||+.|+|||++.+.      .|+.++|||||||++|||++|..||..
T Consensus       165 ~~~~~~~~~GT~~ymAPE~l~~~~~~~~~~~~~k~DVwS~Gvvl~El~tg~~~~~~  220 (303)
T 3hmm_A          165 IDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGI  220 (303)
T ss_dssp             ESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTB
T ss_pred             eeeecccccccccccCHHHhcccccccCCccChhHhhhhHHHHHHHHHHCCCCCCc
Confidence                1224799999999999764      367789999999999999999888754

>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*

Probab=99.97  E-value=6e-31  Score=219.64  Aligned_cols=145  Identities=29%  Similarity=0.434  Sum_probs=110.9

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCCCccccCCCcc
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYR   80 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~~~~~~t~~y~   80 (252)
                      ||+|||++||+||||||+|||++.+                           +.++|+|||++....... ...||+.|+
T Consensus       166 aL~~LH~~~ivH~Dlkp~NIll~~~---------------------------~~~kL~DfG~a~~~~~~~-~~~gt~~y~  217 (348)
T 1u5q_A          166 GLAYLHSHNMIHRDVKAGNILLSEP---------------------------GLVKLGDFGSASIMAPAN-SFVGTPYWM  217 (348)
T ss_dssp             HHHHHHHTTCBCCCCSGGGEEEETT---------------------------TEEEECCCTTCBSSSSBC-CCCSCGGGC
T ss_pred             HHHHHHhCCeeeCCCCHHHEEECCC---------------------------CCEEEeeccCceecCCCC-cccCCccee
Confidence            6899999999999999999999544                           456777777776543322 347899999


Q ss_pred             cchhhh---cCCCCccchhHhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHHHHHHhhcCCCCCCc
Q 025467           81 APEVIL---GLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPE  157 (252)
Q Consensus        81 aPE~l~---~~~~~~~~Diws~G~~l~~l~~g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~  157 (252)
                      |||++.   ...++.++||||+||++|+|++|..||.+.+....+..+....  .|                    ..  
T Consensus       218 aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~~~~~~~~~~~--~~--------------------~~--  273 (348)
T 1u5q_A          218 APEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNE--SP--------------------AL--  273 (348)
T ss_dssp             CHHHHHTTSSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSC--CC--------------------CC--
T ss_pred             CHhhhccccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcC--CC--------------------CC--
Confidence            999986   4568899999999999999999999998766544433322110  00                    00  


Q ss_pred             cccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCCCCCHH
Q 025467          158 GAASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAR  237 (252)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~ta~  237 (252)
                                                                          .....++.+.+||.+||+.||++|||++
T Consensus       274 ----------------------------------------------------~~~~~~~~l~~li~~~l~~dP~~Rps~~  301 (348)
T 1u5q_A          274 ----------------------------------------------------QSGHWSEYFRNFVDSCLQKIPQDRPTSE  301 (348)
T ss_dssp             ----------------------------------------------------CCTTSCHHHHHHHHHHTCSSGGGSCCHH
T ss_pred             ----------------------------------------------------CCCCCCHHHHHHHHHHcccChhhCcCHH
Confidence                                                                0012346889999999999999999999


Q ss_pred             HHHcCCCCCCcc
Q 025467          238 EALRHPFFTRDH  249 (252)
Q Consensus       238 e~l~hpwf~~~~  249 (252)
                      ++++||||....
T Consensus       302 ~ll~h~~~~~~~  313 (348)
T 1u5q_A          302 VLLKHRFVLRER  313 (348)
T ss_dssp             HHTTCHHHHSCC
T ss_pred             HHhhChhhhccC
Confidence            999999997654

>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}

Probab=99.97  E-value=8.1e-31  Score=217.78  Aligned_cols=137  Identities=28%  Similarity=0.453  Sum_probs=107.1

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCC--CccccCCC
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ--NYIVSTRH   78 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~--~~~~~t~~   78 (252)
                      ||+|||++||+||||||+|||++                           ..+.++|+|||.+.......  ....||+.
T Consensus       142 ~L~~LH~~~ivH~Dlkp~NIll~---------------------------~~~~~kL~Dfg~a~~~~~~~~~~~~~gt~~  194 (335)
T 3dls_A          142 AVGYLRLKDIIHRDIKDENIVIA---------------------------EDFTIKLIDFGSAAYLERGKLFYTFCGTIE  194 (335)
T ss_dssp             HHHHHHHTTEECSCCSGGGEEEC---------------------------TTSCEEECCCTTCEECCTTCCBCEECSCGG
T ss_pred             HHHHHHhCCeEEeccCHHHEEEc---------------------------CCCcEEEeecccceECCCCCceeccCCCcc
Confidence            68999999999999999999994                           34567888888776543332  23468999


Q ss_pred             cccchhhhcCCC-CccchhHhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHHHHHHhhcCCCCCCc
Q 025467           79 YRAPEVILGLGW-TYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPE  157 (252)
Q Consensus        79 y~aPE~l~~~~~-~~~~Diws~G~~l~~l~~g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~  157 (252)
                      |+|||++.+..+ +.++||||+||++|+|++|..||......         .                    ....    
T Consensus       195 y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~---------~--------------------~~~~----  241 (335)
T 3dls_A          195 YCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPFCELEET---------V--------------------EAAI----  241 (335)
T ss_dssp             GCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSCSSGGGG---------T--------------------TTCC----
T ss_pred             ccChhhhcCCCCCCCcccchhHHHHHHHHHhCCCchhhHHHH---------H--------------------hhcc----
Confidence            999999988776 78999999999999999999999642110         0                    0000    


Q ss_pred             cccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCCCCCHH
Q 025467          158 GAASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAR  237 (252)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~ta~  237 (252)
                                                                         ......++++.+||.+||+.||++|||++
T Consensus       242 ---------------------------------------------------~~~~~~~~~l~~li~~~L~~dP~~Rps~~  270 (335)
T 3dls_A          242 ---------------------------------------------------HPPYLVSKELMSLVSGLLQPVPERRTTLE  270 (335)
T ss_dssp             ---------------------------------------------------CCSSCCCHHHHHHHHHHTCSSGGGSCCHH
T ss_pred             ---------------------------------------------------CCCcccCHHHHHHHHHHccCChhhCcCHH
Confidence                                                               00122456899999999999999999999


Q ss_pred             HHHcCCCCCCc
Q 025467          238 EALRHPFFTRD  248 (252)
Q Consensus       238 e~l~hpwf~~~  248 (252)
                      ++++||||+..
T Consensus       271 ell~hp~~~~~  281 (335)
T 3dls_A          271 KLVTDPWVTQP  281 (335)
T ss_dssp             HHHHCTTTTCC
T ss_pred             HHhcCccccCC
Confidence            99999999864

>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*

Probab=99.97  E-value=7.6e-31  Score=230.50  Aligned_cols=147  Identities=31%  Similarity=0.500  Sum_probs=110.9

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCC--CccccCCC
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ--NYIVSTRH   78 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~--~~~~~t~~   78 (252)
                      ||+|||++||+||||||+|||++                           ..+.++|+|||++.......  ...+||+.
T Consensus       298 aL~yLH~~gIvHrDLKPeNILld---------------------------~~g~vKL~DFGla~~~~~~~~~~~~~GT~~  350 (576)
T 2acx_A          298 GLEDLHRERIVYRDLKPENILLD---------------------------DHGHIRISDLGLAVHVPEGQTIKGRVGTVG  350 (576)
T ss_dssp             HHHHHHHTTEECCCCCGGGEEEC---------------------------TTSCEEECCCTTCEECCTTCCEECCCSCGG
T ss_pred             HHHHHHHCCEeccCCchheEEEe---------------------------CCCCeEEEecccceecccCccccccCCCcc
Confidence            68999999999999999999994                           44567777887776543322  23478999


Q ss_pred             cccchhhhcCCCCccchhHhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHHHHHHhhcCCCCCCcc
Q 025467           79 YRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEG  158 (252)
Q Consensus        79 y~aPE~l~~~~~~~~~Diws~G~~l~~l~~g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~  158 (252)
                      |+|||++.+..++.++||||+||++|+|++|..||.+.........+...                   .......+   
T Consensus       351 Y~APEvl~~~~~~~~~DiwSLGvilyeLltG~~PF~~~~~~~~~~~i~~~-------------------i~~~~~~~---  408 (576)
T 2acx_A          351 YMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERL-------------------VKEVPEEY---  408 (576)
T ss_dssp             GCCHHHHTTCEESSHHHHHHHHHHHHHHHHSSCSSSCSSSCCCHHHHHHH-------------------HHHCCCCC---
T ss_pred             ccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCcccccchhHHHHHHH-------------------hhcccccC---
Confidence            99999999888999999999999999999999999765321100111000                   00000111   


Q ss_pred             ccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCCCC----
Q 025467          159 AASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRL----  234 (252)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~----  234 (252)
                                                                          ....+.++.+||.+||+.||.+||    
T Consensus       409 ----------------------------------------------------p~~~s~~~~dLI~~lL~~dP~~R~g~~~  436 (576)
T 2acx_A          409 ----------------------------------------------------SERFSPQARSLCSQLLCKDPAERLGCRG  436 (576)
T ss_dssp             ----------------------------------------------------CTTSCHHHHHHHHHHTCSSGGGSTTCSS
T ss_pred             ----------------------------------------------------CccCCHHHHHHHHHhccCCHHHcCCCCC
Confidence                                                                123456899999999999999999    


Q ss_pred             -CHHHHHcCCCCCCc
Q 025467          235 -TAREALRHPFFTRD  248 (252)
Q Consensus       235 -ta~e~l~hpwf~~~  248 (252)
                       |++|+++||||+..
T Consensus       437 ~sa~eil~HpfF~~i  451 (576)
T 2acx_A          437 GSAREVKEHPLFKKL  451 (576)
T ss_dssp             SHHHHHHTSGGGTTC
T ss_pred             CCHHHHHhChhhccC
Confidence             89999999999874

>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}

Probab=99.97  E-value=2.1e-30  Score=214.38  Aligned_cols=140  Identities=28%  Similarity=0.420  Sum_probs=101.1

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCC-----------
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD-----------   69 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~-----------   69 (252)
                      ||+|||++||+||||||+|||++.++.                           ++|+|||.+......           
T Consensus       176 aL~~LH~~~ivH~Dlkp~NIll~~~~~---------------------------~kL~DfG~a~~~~~~~~~~~~~~~~~  228 (332)
T 3qd2_B          176 AVEFLHSKGLMHRDLKPSNIFFTMDDV---------------------------VKVGDFGLVTAMDQDEEEQTVLTPMP  228 (332)
T ss_dssp             HHHHHHHTTEECCCCCGGGEEECTTCC---------------------------EEECCCTTCEECSCC-----------
T ss_pred             HHHHHHhCCeeecCCCcccEEEeCCCC---------------------------EEEeecCcccccccchhhcccccccc
Confidence            689999999999999999999965554                           455555554432221           


Q ss_pred             ----CCccccCCCcccchhhhcCCCCccchhHhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHh-CCCchHHHHHhhHHH
Q 025467           70 ----QNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVL-GPLPQHMLKRVDRHA  144 (252)
Q Consensus        70 ----~~~~~~t~~y~aPE~l~~~~~~~~~Diws~G~~l~~l~~g~~pf~~~~~~~~~~~~~~~~-g~~p~~~~~~~~~~~  144 (252)
                          .....||+.|+|||++.+..++.++||||+||++|++++|..|+.     .....+.... +..|..         
T Consensus       229 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~~~~~~-----~~~~~~~~~~~~~~~~~---------  294 (332)
T 3qd2_B          229 AYATHTGQVGTKLYMSPEQIHGNNYSHKVDIFSLGLILFELLYSFSTQM-----ERVRIITDVRNLKFPLL---------  294 (332)
T ss_dssp             ---CCCSCC-CGGGSCHHHHHCCCCCTHHHHHHHHHHHHHHHSCCCCHH-----HHHHHHHHHHTTCCCHH---------
T ss_pred             ccccccccCCCcCccChHHhcCCCCcchhhHHHHHHHHHHHHHcCCChh-----HHHHHHHHhhccCCCcc---------
Confidence                122468999999999999899999999999999999999866632     1111111111 111110         


Q ss_pred             HHHhhcCCCCCCccccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHH
Q 025467          145 EKYVRRGRLDWPEGAASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQG  224 (252)
Q Consensus       145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~  224 (252)
                                                                                        ....++++.+||.+
T Consensus       295 ------------------------------------------------------------------~~~~~~~~~~li~~  308 (332)
T 3qd2_B          295 ------------------------------------------------------------------FTQKYPQEHMMVQD  308 (332)
T ss_dssp             ------------------------------------------------------------------HHHHCHHHHHHHHH
T ss_pred             ------------------------------------------------------------------cccCChhHHHHHHH
Confidence                                                                              01223577899999


Q ss_pred             hccCCCCCCCCHHHHHcCCCCCC
Q 025467          225 LLRYDPTDRLTAREALRHPFFTR  247 (252)
Q Consensus       225 ~L~~dP~~R~ta~e~l~hpwf~~  247 (252)
                      ||+.||.+|||++|+|+||||++
T Consensus       309 ~l~~~p~~Rps~~~~l~~~~f~~  331 (332)
T 3qd2_B          309 MLSPSPTERPEATDIIENAIFEN  331 (332)
T ss_dssp             HHCSSGGGSCCHHHHHHSTTCCC
T ss_pred             HccCCCCcCCCHHHHhhchhhhc
Confidence            99999999999999999999986

>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A

Probab=99.97  E-value=2.2e-30  Score=210.74  Aligned_cols=146  Identities=21%  Similarity=0.439  Sum_probs=108.0

Q ss_pred             ChhhhhccC--ccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCC-CccccCC
Q 025467            1 MFAVMHDLC--MIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ-NYIVSTR   77 (252)
Q Consensus         1 aL~~lH~~~--ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~-~~~~~t~   77 (252)
                      ||+|||++|  |+||||||+||+++.                          ..+.++|+|||.+....... ....||+
T Consensus       141 ~l~~lH~~~~~i~H~dikp~Nil~~~--------------------------~~~~~kl~Dfg~~~~~~~~~~~~~~~t~  194 (290)
T 1t4h_A          141 GLQFLHTRTPPIIHRDLKCDNIFITG--------------------------PTGSVKIGDLGLATLKRASFAKAVIGTP  194 (290)
T ss_dssp             HHHHHHTSSSCCCCSCCCGGGEEESS--------------------------TTSCEEECCTTGGGGCCTTSBEESCSSC
T ss_pred             HHHHHHcCCCCEEECCCCHHHEEEEC--------------------------CCCCEEEeeCCCcccccccccccccCCc
Confidence            689999999  999999999999941                          33457888888776443332 2246899


Q ss_pred             CcccchhhhcCCCCccchhHhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHHHHHHhhcCCCCCCc
Q 025467           78 HYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPE  157 (252)
Q Consensus        78 ~y~aPE~l~~~~~~~~~Diws~G~~l~~l~~g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~  157 (252)
                      .|+|||++.+ .++.++||||+||++|+|++|..||............... +..+                        
T Consensus       195 ~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~-~~~~------------------------  248 (290)
T 1t4h_A          195 EFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRVTS-GVKP------------------------  248 (290)
T ss_dssp             CCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHHHHHHHTT-TCCC------------------------
T ss_pred             CcCCHHHHhc-cCCCcchHHHHHHHHHHHHhCCCCCCCcCcHHHHHHHHhc-cCCc------------------------
Confidence            9999998764 5899999999999999999999999775543332211100 0000                        


Q ss_pred             cccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCCCCCHH
Q 025467          158 GAASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAR  237 (252)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~ta~  237 (252)
                                                                        .......++++.+||.+||+.||.+|||++
T Consensus       249 --------------------------------------------------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~  278 (290)
T 1t4h_A          249 --------------------------------------------------ASFDKVAIPEVKEIIEGCIRQNKDERYSIK  278 (290)
T ss_dssp             --------------------------------------------------GGGGGCCCHHHHHHHHHHSCSSGGGSCCHH
T ss_pred             --------------------------------------------------cccCCCCCHHHHHHHHHHccCChhhCCCHH
Confidence                                                              000122346899999999999999999999


Q ss_pred             HHHcCCCCCCc
Q 025467          238 EALRHPFFTRD  248 (252)
Q Consensus       238 e~l~hpwf~~~  248 (252)
                      ++++||||+.+
T Consensus       279 ell~h~~f~~~  289 (290)
T 1t4h_A          279 DLLNHAFFQEE  289 (290)
T ss_dssp             HHHTSGGGC--
T ss_pred             HHhhCcccccC
Confidence            99999999875

>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...

Probab=99.97  E-value=5.5e-31  Score=213.43  Aligned_cols=153  Identities=25%  Similarity=0.387  Sum_probs=114.9

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCC--CccccCCC
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ--NYIVSTRH   78 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~--~~~~~t~~   78 (252)
                      ||+|||++||+||||||+||++..++                       .....++|+|||.+.......  ....+++.
T Consensus       120 ~l~~lH~~~i~H~dl~p~Nil~~~~~-----------------------~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~  176 (283)
T 3bhy_A          120 GVHYLHSKRIAHFDLKPENIMLLDKN-----------------------VPNPRIKLIDFGIAHKIEAGNEFKNIFGTPE  176 (283)
T ss_dssp             HHHHHHHTTEECSCCSGGGEEESCSS-----------------------SSSCCEEECCCTTCEECC--------CCCGG
T ss_pred             HHHHHHhCCccCCCCChHHEEEecCC-----------------------CCCCceEEEecccceeccCCCcccccCCCcC
Confidence            68999999999999999999996543                       123367888988886543322  23468899


Q ss_pred             cccchhhhcCCCCccchhHhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHHHHHHhhcCCCCCCcc
Q 025467           79 YRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEG  158 (252)
Q Consensus        79 y~aPE~l~~~~~~~~~Diws~G~~l~~l~~g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~  158 (252)
                      |+|||++.+..++.++||||+||++|++++|..||.+....+.+..+.......+..                       
T Consensus       177 y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~-----------------------  233 (283)
T 3bhy_A          177 FVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQETLTNISAVNYDFDEE-----------------------  233 (283)
T ss_dssp             GCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTTCCCCCHH-----------------------
T ss_pred             ccCcceecCCCCCcchhhhhHHHHHHHHHHCCCCCCCcchHHHHHHhHhcccCCcch-----------------------
Confidence            999999998889999999999999999999999998766554443332211111110                       


Q ss_pred             ccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCCCCCHHH
Q 025467          159 AASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTARE  238 (252)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~ta~e  238 (252)
                                                                         .....+..+.+|+.+||+.||++|||+.+
T Consensus       234 ---------------------------------------------------~~~~~~~~~~~li~~~l~~dp~~Rps~~~  262 (283)
T 3bhy_A          234 ---------------------------------------------------YFSNTSELAKDFIRRLLVKDPKRRMTIAQ  262 (283)
T ss_dssp             ---------------------------------------------------HHTTCCHHHHHHHHTTSCSSGGGSCCHHH
T ss_pred             ---------------------------------------------------hcccCCHHHHHHHHHHccCCHhHCcCHHH
Confidence                                                               01234568899999999999999999999


Q ss_pred             HHcCCCCCCccc
Q 025467          239 ALRHPFFTRDHL  250 (252)
Q Consensus       239 ~l~hpwf~~~~~  250 (252)
                      +++||||+....
T Consensus       263 ~l~h~~~~~~~~  274 (283)
T 3bhy_A          263 SLEHSWIKAIRR  274 (283)
T ss_dssp             HHHCHHHHHHHH
T ss_pred             HHhCHHHHHHHH
Confidence            999999986543

>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B

Probab=99.97  E-value=1.4e-30  Score=227.97  Aligned_cols=143  Identities=26%  Similarity=0.426  Sum_probs=110.1

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCC---CccccCC
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ---NYIVSTR   77 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~---~~~~~t~   77 (252)
                      ||+|||++||+||||||+|||++                           ..+.++|+|||++.......   ...+||+
T Consensus       301 aL~~LH~~gIvHrDLKP~NILl~---------------------------~~g~vkL~DFGla~~~~~~~~~~~~~~GT~  353 (543)
T 3c4z_A          301 GLEHLHQRNIIYRDLKPENVLLD---------------------------DDGNVRISDLGLAVELKAGQTKTKGYAGTP  353 (543)
T ss_dssp             HHHHHHHTTEECCCCCGGGEEEC---------------------------TTSCEEECCCTTCEECCTTCCCBCCCCSCT
T ss_pred             HHHHHHHcCCcccCCChHHEEEe---------------------------CCCCEEEeecceeeeccCCCcccccccCCc
Confidence            68999999999999999999994                           44567778888776543322   2247999


Q ss_pred             CcccchhhhcCCCCccchhHhHHHHHHHHHhCCCCCCCCCh----HHHHHHHHHHhCCCchHHHHHhhHHHHHHhhcCCC
Q 025467           78 HYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHEN----LEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRL  153 (252)
Q Consensus        78 ~y~aPE~l~~~~~~~~~Diws~G~~l~~l~~g~~pf~~~~~----~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~  153 (252)
                      .|+|||++.+..|+.++|+||+||++|+|++|..||.+...    ......+.                       ....
T Consensus       354 ~Y~APE~l~~~~~~~~~DiwSlGvilyelltG~~PF~~~~~~~~~~~~~~~i~-----------------------~~~~  410 (543)
T 3c4z_A          354 GFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVL-----------------------EQAV  410 (543)
T ss_dssp             TTSCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCTTCCCCHHHHHHHHH-----------------------HCCC
T ss_pred             cccChhhhcCCCCChHHhcCcchHHHHHHHhCCCCCCCCccchhHHHHHHHHh-----------------------hccc
Confidence            99999999998999999999999999999999999976532    11111111                       0111


Q ss_pred             CCCccccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCCC
Q 025467          154 DWPEGAASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDR  233 (252)
Q Consensus       154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R  233 (252)
                      .++                                                       ...+.++.+||.+||+.||++|
T Consensus       411 ~~p-------------------------------------------------------~~~s~~~~~li~~lL~~dP~~R  435 (543)
T 3c4z_A          411 TYP-------------------------------------------------------DKFSPASKDFCEALLQKDPEKR  435 (543)
T ss_dssp             CCC-------------------------------------------------------TTSCHHHHHHHHHHSCSSGGGS
T ss_pred             CCC-------------------------------------------------------cccCHHHHHHHHHhccCCHhHC
Confidence            111                                                       2345689999999999999999


Q ss_pred             CC-----HHHHHcCCCCCCc
Q 025467          234 LT-----AREALRHPFFTRD  248 (252)
Q Consensus       234 ~t-----a~e~l~hpwf~~~  248 (252)
                      |+     ++++++||||+..
T Consensus       436 ~~~~~~~a~ei~~Hpff~~i  455 (543)
T 3c4z_A          436 LGFRDGSCDGLRTHPLFRDI  455 (543)
T ss_dssp             CCCBTTBSHHHHTSGGGTTC
T ss_pred             CCCcccCHHHHHcCccccCC
Confidence            96     5899999999874

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}

Probab=99.97  E-value=1.5e-30  Score=227.27  Aligned_cols=149  Identities=28%  Similarity=0.443  Sum_probs=116.3

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCC--CccccCCC
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ--NYIVSTRH   78 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~--~~~~~t~~   78 (252)
                      ||+|||++||+||||||+|||+...+                        ....++|+|||++.......  ...+||+.
T Consensus       158 ~l~~lH~~~ivH~Dlkp~Nil~~~~~------------------------~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~  213 (504)
T 3q5i_A          158 GICYLHKHNIVHRDIKPENILLENKN------------------------SLLNIKIVDFGLSSFFSKDYKLRDRLGTAY  213 (504)
T ss_dssp             HHHHHHHTTEECSCCSGGGEEESSTT------------------------CCSSEEECCCTTCEECCTTSCBCCCCSCTT
T ss_pred             HHHHHHHCCeEeCCCcHHHEEEecCC------------------------CCccEEEEECCCCEEcCCCCccccccCCcC
Confidence            68999999999999999999995432                        22358899999887554332  23578999


Q ss_pred             cccchhhhcCCCCccchhHhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHHHHHHhhcCCCCCCcc
Q 025467           79 YRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEG  158 (252)
Q Consensus        79 y~aPE~l~~~~~~~~~Diws~G~~l~~l~~g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~  158 (252)
                      |+|||++. ..++.++||||+||++|+|++|..||.+.+..+.+..+.......+.                        
T Consensus       214 y~aPE~~~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~------------------------  268 (504)
T 3q5i_A          214 YIAPEVLK-KKYNEKCDVWSCGVIMYILLCGYPPFGGQNDQDIIKKVEKGKYYFDF------------------------  268 (504)
T ss_dssp             TCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCH------------------------
T ss_pred             CCCHHHhc-cCCCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCCc------------------------
Confidence            99999986 46899999999999999999999999987766655544331111110                        


Q ss_pred             ccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCCCCCHHH
Q 025467          159 AASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTARE  238 (252)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~ta~e  238 (252)
                                                                        ..+...++++.+||++||++||.+|||++|
T Consensus       269 --------------------------------------------------~~~~~~s~~~~~li~~~L~~dp~~R~t~~e  298 (504)
T 3q5i_A          269 --------------------------------------------------NDWKNISDEAKELIKLMLTYDYNKRCTAEE  298 (504)
T ss_dssp             --------------------------------------------------HHHTTSCHHHHHHHHHHTCSSTTTSCCHHH
T ss_pred             --------------------------------------------------cccCCCCHHHHHHHHHHcCCChhHCCCHHH
Confidence                                                              112345678999999999999999999999


Q ss_pred             HHcCCCCCCc
Q 025467          239 ALRHPFFTRD  248 (252)
Q Consensus       239 ~l~hpwf~~~  248 (252)
                      +|+||||+..
T Consensus       299 ~l~h~~~~~~  308 (504)
T 3q5i_A          299 ALNSRWIKKY  308 (504)
T ss_dssp             HHTSHHHHHT
T ss_pred             HhcCHhhhhc
Confidence            9999999754

>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*

Probab=99.96  E-value=1.3e-30  Score=211.34  Aligned_cols=162  Identities=19%  Similarity=0.264  Sum_probs=106.4

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCCCccccCCCcc
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYR   80 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~~~~~~t~~y~   80 (252)
                      ||+|||++||+||||||+||+++.++.....+.....        .........++|+|||.+........ ..||+.|+
T Consensus       127 al~~lH~~~ivH~Dikp~NIl~~~~~~~~~~~~~~~~--------~~~~~~~~~~kl~Dfg~~~~~~~~~~-~~gt~~y~  197 (289)
T 1x8b_A          127 GLRYIHSMSLVHMDIKPSNIFISRTSIPNAASEEGDE--------DDWASNKVMFKIGDLGHVTRISSPQV-EEGDSRFL  197 (289)
T ss_dssp             HHHHHHHTTEECSCCSGGGEEEC----------------------------CCCEEECCCTTCEETTCSCC-CCCCGGGC
T ss_pred             HHHHHHhCCEeecCCCHHHEEEcCCCCCccccccccc--------ccccCCceEEEEcccccccccCCccc-cCCCcccc
Confidence            6899999999999999999999766533322211100        00002345789999999876554332 36899999


Q ss_pred             cchhhhcC-CCCccchhHhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHHHHHHhhcCCCCCCccc
Q 025467           81 APEVILGL-GWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGA  159 (252)
Q Consensus        81 aPE~l~~~-~~~~~~Diws~G~~l~~l~~g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~  159 (252)
                      |||++.+. .++.++||||+||+++++++|.+++.....   ...+.                       .+...     
T Consensus       198 aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~---~~~~~-----------------------~~~~~-----  246 (289)
T 1x8b_A          198 ANEVLQENYTHLPKADIFALALTVVCAAGAEPLPRNGDQ---WHEIR-----------------------QGRLP-----  246 (289)
T ss_dssp             CHHHHTTCCTTHHHHHHHHHHHHHHHHTTCCCCCSSSHH---HHHHH-----------------------TTCCC-----
T ss_pred             ChhHhcCCCCCCchhhHHHHHHHHHHHhcCCCCCcchhH---HHHHH-----------------------cCCCC-----
Confidence            99999876 567899999999999999999887653221   11110                       00000     


Q ss_pred             cchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCCCCCHHHH
Q 025467          160 ASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREA  239 (252)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~ta~e~  239 (252)
                                                                       ......+.++.+|+.+||+.||++|||+.++
T Consensus       247 -------------------------------------------------~~~~~~~~~~~~li~~~l~~dp~~Rps~~~l  277 (289)
T 1x8b_A          247 -------------------------------------------------RIPQVLSQEFTELLKVMIHPDPERRPSAMAL  277 (289)
T ss_dssp             -------------------------------------------------CCSSCCCHHHHHHHHHHTCSSGGGSCCHHHH
T ss_pred             -------------------------------------------------CCCcccCHHHHHHHHHHhCCCcccCCCHHHH
Confidence                                                             0012345689999999999999999999999


Q ss_pred             HcCCCCCCcccc
Q 025467          240 LRHPFFTRDHLR  251 (252)
Q Consensus       240 l~hpwf~~~~~~  251 (252)
                      ++||||+....|
T Consensus       278 l~h~~~~~~~~k  289 (289)
T 1x8b_A          278 VKHSVLLSASRK  289 (289)
T ss_dssp             HTCTTC------
T ss_pred             hhChHhhhhccC
Confidence            999999987543

>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...

Probab=99.96  E-value=7.1e-31  Score=220.03  Aligned_cols=94  Identities=31%  Similarity=0.502  Sum_probs=75.9

Q ss_pred             Chhhhhcc-CccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCC-CCCccccCCC
Q 025467            1 MFAVMHDL-CMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERP-DQNYIVSTRH   78 (252)
Q Consensus         1 aL~~lH~~-~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~-~~~~~~~t~~   78 (252)
                      ||+|||+. ||+||||||+|||++                           ..+.++|+|||.+..... ......||+.
T Consensus       143 ~l~~lh~~~~i~H~dlkp~Nil~~---------------------------~~~~~kl~Dfg~~~~~~~~~~~~~~gt~~  195 (360)
T 3eqc_A          143 GLTYLREKHKIMHRDVKPSNILVN---------------------------SRGEIKLCDFGVSGQLIDSMANSFVGTRS  195 (360)
T ss_dssp             HHHHHHHHHCCCCSCCSGGGEEEC---------------------------TTCCEEECCCCCCHHHHHHC----CCCCT
T ss_pred             HHHHHHHhCCEEcCCccHHHEEEC---------------------------CCCCEEEEECCCCcccccccccCCCCCCC
Confidence            58999995 999999999999994                           445678888887753211 1223478999


Q ss_pred             cccchhhhcCCCCccchhHhHHHHHHHHHhCCCCCCCCChHHH
Q 025467           79 YRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEH  121 (252)
Q Consensus        79 y~aPE~l~~~~~~~~~Diws~G~~l~~l~~g~~pf~~~~~~~~  121 (252)
                      |+|||++.+..++.++||||+||++|+|++|..||...+..+.
T Consensus       196 y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~  238 (360)
T 3eqc_A          196 YMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKEL  238 (360)
T ss_dssp             TCCHHHHTTCCCSHHHHHHHHHHHHHHHHHTSCCSSCCCHHHH
T ss_pred             eECHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH
Confidence            9999999998999999999999999999999999987665543

>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A

Probab=99.96  E-value=1.6e-30  Score=212.99  Aligned_cols=151  Identities=26%  Similarity=0.452  Sum_probs=114.1

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCC-CccccCCCc
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ-NYIVSTRHY   79 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~-~~~~~t~~y   79 (252)
                      ||+|||++||+||||||+||++...                        +....++|+|||.+....... ....||+.|
T Consensus       118 ~l~~lH~~~i~H~dikp~NIl~~~~------------------------~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~y  173 (304)
T 2jam_A          118 AVKYLHENGIVHRDLKPENLLYLTP------------------------EENSKIMITDFGLSKMEQNGIMSTACGTPGY  173 (304)
T ss_dssp             HHHHHHHTTCCCCSCCGGGCEESSS------------------------STTCCEEBCSCSTTCCCCCBTTHHHHSCCCB
T ss_pred             HHHHHHHCCccccCCCHHHEEEecC------------------------CCCCCEEEccCCcceecCCCccccccCCCCc
Confidence            6899999999999999999999321                        123457778888775433321 224689999


Q ss_pred             ccchhhhcCCCCccchhHhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHHHHHHhhcCCCCCCccc
Q 025467           80 RAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGA  159 (252)
Q Consensus        80 ~aPE~l~~~~~~~~~Diws~G~~l~~l~~g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~  159 (252)
                      +|||++.+..++.++||||+||++|++++|..||.+.........+....                       ...+.  
T Consensus       174 ~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~-----------------------~~~~~--  228 (304)
T 2jam_A          174 VAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPFYEETESKLFEKIKEGY-----------------------YEFES--  228 (304)
T ss_dssp             CCTTTBSSCSCCHHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHCC-----------------------CCCCT--
T ss_pred             cChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHcCC-----------------------CCCCc--
Confidence            99999998889999999999999999999999998766554443332211                       10000  


Q ss_pred             cchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCCCCCHHHH
Q 025467          160 ASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREA  239 (252)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~ta~e~  239 (252)
                                                                       ......+.++.+||.+||+.||++|||++++
T Consensus       229 -------------------------------------------------~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~  259 (304)
T 2jam_A          229 -------------------------------------------------PFWDDISESAKDFICHLLEKDPNERYTCEKA  259 (304)
T ss_dssp             -------------------------------------------------TTTTTSCHHHHHHHHHHHCSSTTTSCCHHHH
T ss_pred             -------------------------------------------------cccccCCHHHHHHHHHHcCCChhHCcCHHHH
Confidence                                                             0112345689999999999999999999999


Q ss_pred             HcCCCCCCcc
Q 025467          240 LRHPFFTRDH  249 (252)
Q Consensus       240 l~hpwf~~~~  249 (252)
                      ++||||+...
T Consensus       260 l~h~~~~~~~  269 (304)
T 2jam_A          260 LSHPWIDGNT  269 (304)
T ss_dssp             HTSHHHHSSC
T ss_pred             hcCccccCCC
Confidence            9999997653

>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}

Probab=99.96  E-value=6.3e-31  Score=212.62  Aligned_cols=145  Identities=28%  Similarity=0.470  Sum_probs=87.6

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCC---CCccccCC
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD---QNYIVSTR   77 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~---~~~~~~t~   77 (252)
                      ||+|||++||+||||||+||+++.                           .+.++|+|||.+......   .....||+
T Consensus       124 ~l~~lH~~~i~H~dl~p~Nili~~---------------------------~~~~kl~dfg~~~~~~~~~~~~~~~~~~~  176 (278)
T 3cok_A          124 GMLYLHSHGILHRDLTLSNLLLTR---------------------------NMNIKIADFGLATQLKMPHEKHYTLCGTP  176 (278)
T ss_dssp             HHHHHHHTTEECSSCCGGGEEECT---------------------------TCCEEECCCTTCEECC-------------
T ss_pred             HHHHHHHCCeecCCCCHHHEEEcC---------------------------CCCEEEEeecceeeccCCCCcceeccCCC
Confidence            689999999999999999999944                           445777777777543321   12246889


Q ss_pred             CcccchhhhcCCCCccchhHhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHHHHHHhhcCCCCCCc
Q 025467           78 HYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPE  157 (252)
Q Consensus        78 ~y~aPE~l~~~~~~~~~Diws~G~~l~~l~~g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~  157 (252)
                      .|+|||.+.+..++.++||||+||++|++++|..||........+..+.                       ....    
T Consensus       177 ~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~-----------------------~~~~----  229 (278)
T 3cok_A          177 NYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNTLNKVV-----------------------LADY----  229 (278)
T ss_dssp             ---------------CTHHHHHHHHHHHHHHSSCSSCCCSCC-----CC-----------------------SSCC----
T ss_pred             CcCCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCChhHHHHHHHHh-----------------------hccc----
Confidence            9999999988888999999999999999999999997644221111000                       0000    


Q ss_pred             cccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCCCCCHH
Q 025467          158 GAASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAR  237 (252)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~ta~  237 (252)
                                                                         ......+.++.+||.+||+.||++|||++
T Consensus       230 ---------------------------------------------------~~~~~~~~~~~~li~~~l~~dp~~Rps~~  258 (278)
T 3cok_A          230 ---------------------------------------------------EMPSFLSIEAKDLIHQLLRRNPADRLSLS  258 (278)
T ss_dssp             ---------------------------------------------------CCCTTSCHHHHHHHHHHSCSSGGGSCCHH
T ss_pred             ---------------------------------------------------CCccccCHHHHHHHHHHcccCHhhCCCHH
Confidence                                                               00112456889999999999999999999


Q ss_pred             HHHcCCCCCCccc
Q 025467          238 EALRHPFFTRDHL  250 (252)
Q Consensus       238 e~l~hpwf~~~~~  250 (252)
                      ++++||||.+...
T Consensus       259 ~~l~h~~~~~~~~  271 (278)
T 3cok_A          259 SVLDHPFMSRNSS  271 (278)
T ss_dssp             HHTTSTTTC----
T ss_pred             HHhcCccccCCCC
Confidence            9999999987653

>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}

Probab=99.96  E-value=7.6e-32  Score=230.00  Aligned_cols=138  Identities=20%  Similarity=0.360  Sum_probs=105.8

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCCCccccCCCcc
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYR   80 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~~~~~~t~~y~   80 (252)
                      ||+|||++||+||||||+|||++.                           .+.+||+|||+++.........+| +.|+
T Consensus       223 aL~~LH~~~iiHrDiKp~NILl~~---------------------------~~~~kL~DFG~a~~~~~~~~~~~g-~~y~  274 (413)
T 3dzo_A          223 LLASLHHYGLVHTYLRPVDIVLDQ---------------------------RGGVFLTGFEHLVRDGASAVSPIG-RGFA  274 (413)
T ss_dssp             HHHHHHHTTEECSCCCGGGEEECT---------------------------TCCEEECCGGGCEETTEEECCCCC-TTTC
T ss_pred             HHHHHHhCCcccCCcccceEEEec---------------------------CCeEEEEeccceeecCCccccCCC-Ccee
Confidence            689999999999999999999954                           445777777777654443344567 8999


Q ss_pred             cchhh----------hcCCCCccchhHhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHHHHHHhhc
Q 025467           81 APEVI----------LGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRR  150 (252)
Q Consensus        81 aPE~l----------~~~~~~~~~Diws~G~~l~~l~~g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~  150 (252)
                      |||++          ....++.++||||+||++|+|++|+.||.+.+......                           
T Consensus       275 aPE~~~~~~~~~~~~~~~~~~~~~DvwSlGvil~elltg~~Pf~~~~~~~~~~---------------------------  327 (413)
T 3dzo_A          275 PPETTAERMLPFGQHHPTLMTFAFDTWTLGLAIYWIWCADLPNTDDAALGGSE---------------------------  327 (413)
T ss_dssp             CHHHHHHHTSTTGGGCCEEECHHHHHHHHHHHHHHHHHSSCCCCTTGGGSCSG---------------------------
T ss_pred             CchhhhccccccccccCcCCCchhhHHHHHHHHHHHHHCCCCCCCcchhhhHH---------------------------
Confidence            99999          33457889999999999999999999997543210000                           


Q ss_pred             CCCCCCccccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCC
Q 025467          151 GRLDWPEGAASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDP  230 (252)
Q Consensus       151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP  230 (252)
                                                                             .........++++.+||.+||+.||
T Consensus       328 -------------------------------------------------------~~~~~~~~~~~~~~~li~~~l~~dP  352 (413)
T 3dzo_A          328 -------------------------------------------------------WIFRSCKNIPQPVRALLEGFLRYPK  352 (413)
T ss_dssp             -------------------------------------------------------GGGSSCCCCCHHHHHHHHHHTCSSG
T ss_pred             -------------------------------------------------------HHHhhcccCCHHHHHHHHHHccCCh
Confidence                                                                   0000112345689999999999999


Q ss_pred             CCCCCHHHHHcCCCCCCc
Q 025467          231 TDRLTAREALRHPFFTRD  248 (252)
Q Consensus       231 ~~R~ta~e~l~hpwf~~~  248 (252)
                      ++|||+.++++||||+..
T Consensus       353 ~~Rpt~~~~l~~~~~~~~  370 (413)
T 3dzo_A          353 EDRLLPLQAMETPEYEQL  370 (413)
T ss_dssp             GGSCCHHHHTTSHHHHHH
T ss_pred             hhCcCHHHHHhCHHHHHH
Confidence            999999999999999753

>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}

Probab=99.96  E-value=1.5e-30  Score=223.11  Aligned_cols=151  Identities=27%  Similarity=0.423  Sum_probs=105.7

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCC------CCccc
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD------QNYIV   74 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~------~~~~~   74 (252)
                      ||+|||++||+||||||+|||++.++.                      .....++|+|||++......      .....
T Consensus       130 aL~~LH~~~ivHrDlKp~NIll~~~~~----------------------~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~  187 (432)
T 3p23_A          130 GLAHLHSLNIVHRDLKPHNILISMPNA----------------------HGKIKAMISDFGLCKKLAVGRHSFSRRSGVP  187 (432)
T ss_dssp             HHHHHHHTTCCCCCCSTTSEEECCCBT----------------------TTBCCEEECCTTEEECC------------CC
T ss_pred             HHHHHHHCcCEeCCCCHHHEEEecCCC----------------------CCceeEEEecccceeeccCCCcceeeccccC
Confidence            689999999999999999999954321                      23345678888887654322      12347


Q ss_pred             cCCCcccchhhhc---CCCCccchhHhHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHHHHHHhhc
Q 025467           75 STRHYRAPEVILG---LGWTYPCDIWSVGCILVELCT-GEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRR  150 (252)
Q Consensus        75 ~t~~y~aPE~l~~---~~~~~~~Diws~G~~l~~l~~-g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~  150 (252)
                      ||+.|+|||++.+   ..++.++||||+||++|++++ |..||........ .   ...+...                 
T Consensus       188 gt~~y~APE~l~~~~~~~~t~~~DiwSlG~il~ellt~g~~pf~~~~~~~~-~---~~~~~~~-----------------  246 (432)
T 3p23_A          188 GTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQRQA-N---ILLGACS-----------------  246 (432)
T ss_dssp             SCTTSCCGGGTSCC---CCCTHHHHHHHHHHHHHHHTTSCBTTBSTTTHHH-H---HHTTCCC-----------------
T ss_pred             CCcCccChhhhhcccccCCCcHHHHHHHHHHHHHHHcCCCCCcchhhHHHH-H---HHhccCC-----------------
Confidence            8999999999974   456789999999999999999 8899854332211 1   0111100                 


Q ss_pred             CCCCCCccccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCC
Q 025467          151 GRLDWPEGAASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDP  230 (252)
Q Consensus       151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP  230 (252)
                        ....                                                    ......+..+.+||.+||+.||
T Consensus       247 --~~~~----------------------------------------------------~~~~~~~~~~~~li~~~L~~dP  272 (432)
T 3p23_A          247 --LDCL----------------------------------------------------HPEKHEDVIARELIEKMIAMDP  272 (432)
T ss_dssp             --CTTS----------------------------------------------------CTTCHHHHHHHHHHHHHSCSSG
T ss_pred             --cccc----------------------------------------------------CccccccHHHHHHHHHHHhCCH
Confidence              0000                                                    0001234568899999999999


Q ss_pred             CCCCCHHHHHcCCCCCCc
Q 025467          231 TDRLTAREALRHPFFTRD  248 (252)
Q Consensus       231 ~~R~ta~e~l~hpwf~~~  248 (252)
                      .+|||++++++||||...
T Consensus       273 ~~Rps~~evl~hp~f~~~  290 (432)
T 3p23_A          273 QKRPSAKHVLKHPFFWSL  290 (432)
T ss_dssp             GGSCCHHHHHTSTTTCCH
T ss_pred             hhCCCHHHHHhCccccCh
Confidence            999999999999999763

>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A

Probab=99.96  E-value=8e-31  Score=213.12  Aligned_cols=145  Identities=28%  Similarity=0.475  Sum_probs=100.1

Q ss_pred             Chhhhhcc-CccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCC--CccccCC
Q 025467            1 MFAVMHDL-CMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ--NYIVSTR   77 (252)
Q Consensus         1 aL~~lH~~-~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~--~~~~~t~   77 (252)
                      ||+|||++ ||+||||||+||+++.+                           +.++|+|||.+.......  ....||+
T Consensus       121 ~l~~lH~~~~i~H~dlkp~Nil~~~~---------------------------~~~kl~Dfg~~~~~~~~~~~~~~~~t~  173 (290)
T 3fme_A          121 ALEHLHSKLSVIHRDVKPSNVLINAL---------------------------GQVKMCDFGISGYLVDDVAKDIDAGCK  173 (290)
T ss_dssp             HHHHHHHHSCCCCCCCSGGGCEECTT---------------------------CCEEBCCC---------------CCCC
T ss_pred             HHHHHhhcCCeecCCCCHHHEEECCC---------------------------CCEEEeecCCcccccccccccccCCCc
Confidence            68999998 99999999999999544                           456666777665432221  2236889


Q ss_pred             Ccccchhh----hcCCCCccchhHhHHHHHHHHHhCCCCCCCCChH-HHHHHHHHHhCCCchHHHHHhhHHHHHHhhcCC
Q 025467           78 HYRAPEVI----LGLGWTYPCDIWSVGCILVELCTGEALFQTHENL-EHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGR  152 (252)
Q Consensus        78 ~y~aPE~l----~~~~~~~~~Diws~G~~l~~l~~g~~pf~~~~~~-~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~  152 (252)
                      .|+|||++    .+..++.++||||+||++|++++|..||...... ..+.....                      ...
T Consensus       174 ~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~----------------------~~~  231 (290)
T 3fme_A          174 PYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVVE----------------------EPS  231 (290)
T ss_dssp             CCSCHHHHSCCTTC--CCHHHHHHHHHHHHHHHHHTSCSSCCCSCHHHHHHHHHH----------------------SCC
T ss_pred             cccChhhcChhhcCcCCCcHHHHHHHHHHHHHHHHCCCCccccCchHHHHHHHhc----------------------cCC
Confidence            99999997    4456889999999999999999999999764332 22221111                      000


Q ss_pred             CCCCccccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCC
Q 025467          153 LDWPEGAASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTD  232 (252)
Q Consensus       153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~  232 (252)
                      ...+                                                      ....+.++.+|+.+||+.||++
T Consensus       232 ~~~~------------------------------------------------------~~~~~~~~~~li~~~l~~~p~~  257 (290)
T 3fme_A          232 PQLP------------------------------------------------------ADKFSAEFVDFTSQCLKKNSKE  257 (290)
T ss_dssp             CCCC------------------------------------------------------TTTSCHHHHHHHHHHTCSSGGG
T ss_pred             CCcc------------------------------------------------------cccCCHHHHHHHHHHhhcChhh
Confidence            0000                                                      0224568999999999999999


Q ss_pred             CCCHHHHHcCCCCCCc
Q 025467          233 RLTAREALRHPFFTRD  248 (252)
Q Consensus       233 R~ta~e~l~hpwf~~~  248 (252)
                      |||+.|+++||||+..
T Consensus       258 Rpt~~e~l~hp~f~~~  273 (290)
T 3fme_A          258 RPTYPELMQHPFFTLH  273 (290)
T ss_dssp             SCCHHHHTTSHHHHHH
T ss_pred             CcCHHHHHhCcccccC
Confidence            9999999999999754

>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...

Probab=99.96  E-value=5.1e-30  Score=206.93  Aligned_cols=147  Identities=24%  Similarity=0.411  Sum_probs=107.9

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCC-----CCcccc
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD-----QNYIVS   75 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~-----~~~~~~   75 (252)
                      ||+|||++||+||||||+||+++.+                           +.++|+|||.+......     .....|
T Consensus       117 ~l~~lH~~~i~H~dl~p~Nil~~~~---------------------------~~~kl~dfg~~~~~~~~~~~~~~~~~~~  169 (276)
T 2yex_A          117 GVVYLHGIGITHRDIKPENLLLDER---------------------------DNLKISDFGLATVFRYNNRERLLNKMCG  169 (276)
T ss_dssp             HHHHHHHTTEECSCCSGGGEEECTT---------------------------CCEEECCCTTCEECEETTEECCBCCCCS
T ss_pred             HHHHHHhCCeeccCCChHHEEEccC---------------------------CCEEEeeCCCccccCCCcchhcccCCcc
Confidence            6899999999999999999999543                           45677777766532211     123468


Q ss_pred             CCCcccchhhhcCCC-CccchhHhHHHHHHHHHhCCCCCCCCChHHH-HHHHHHHhCCCchHHHHHhhHHHHHHhhcCCC
Q 025467           76 TRHYRAPEVILGLGW-TYPCDIWSVGCILVELCTGEALFQTHENLEH-LAMMERVLGPLPQHMLKRVDRHAEKYVRRGRL  153 (252)
Q Consensus        76 t~~y~aPE~l~~~~~-~~~~Diws~G~~l~~l~~g~~pf~~~~~~~~-~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~  153 (252)
                      ++.|+|||++.+..+ +.++||||+||++|++++|..||........ ...+..                      . ..
T Consensus       170 ~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~----------------------~-~~  226 (276)
T 2yex_A          170 TLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKE----------------------K-KT  226 (276)
T ss_dssp             CGGGCCGGGGTCSSBCHHHHHHHHHHHHHHHHHHSSCCCSCSCTTSHHHHHHHT----------------------T-CT
T ss_pred             ccCccChHHHhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCchHHHHHHHhhh----------------------c-cc
Confidence            899999999987765 7789999999999999999999976543211 111000                      0 00


Q ss_pred             CCCccccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCCC
Q 025467          154 DWPEGAASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDR  233 (252)
Q Consensus       154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R  233 (252)
                      .                                                     .......+..+.+||.+||+.||.+|
T Consensus       227 ~-----------------------------------------------------~~~~~~~~~~~~~li~~~l~~~p~~R  253 (276)
T 2yex_A          227 Y-----------------------------------------------------LNPWKKIDSAPLALLHKILVENPSAR  253 (276)
T ss_dssp             T-----------------------------------------------------STTGGGSCHHHHHHHHHHSCSSTTTS
T ss_pred             c-----------------------------------------------------cCchhhcCHHHHHHHHHHCCCCchhC
Confidence            0                                                     00012345688999999999999999


Q ss_pred             CCHHHHHcCCCCCCccc
Q 025467          234 LTAREALRHPFFTRDHL  250 (252)
Q Consensus       234 ~ta~e~l~hpwf~~~~~  250 (252)
                      ||++|+++||||++...
T Consensus       254 ps~~~il~~~~~~~~~~  270 (276)
T 2yex_A          254 ITIPDIKKDRWYNKPLK  270 (276)
T ss_dssp             CCHHHHTTCTTTTCCCC
T ss_pred             CCHHHHhcCccccChhh
Confidence            99999999999987643

>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*

Probab=99.96  E-value=2.9e-30  Score=214.39  Aligned_cols=144  Identities=33%  Similarity=0.503  Sum_probs=111.3

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCC---CCccccCC
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD---QNYIVSTR   77 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~---~~~~~~t~   77 (252)
                      ||+|||++||+||||||+||+++.                           .+.++|+|||.+......   .....||.
T Consensus       153 aL~~LH~~~ivH~dlkp~NIl~~~---------------------------~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~  205 (335)
T 2owb_A          153 GCQYLHRNRVIHRDLKLGNLFLNE---------------------------DLEVKIGDFGLATKVEYDGERKKVLCGTP  205 (335)
T ss_dssp             HHHHHHHTTEECSCCCGGGEEECT---------------------------TCCEEECCCTTCEECCSTTCCBCCCCSCC
T ss_pred             HHHHHHHCCCEecCCCchhEEEcC---------------------------CCCEEEeeccCceecccCcccccccCCCc
Confidence            689999999999999999999944                           445677777777543221   22346899


Q ss_pred             CcccchhhhcCCCCccchhHhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHHHHHHhhcCCCCCCc
Q 025467           78 HYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPE  157 (252)
Q Consensus        78 ~y~aPE~l~~~~~~~~~Diws~G~~l~~l~~g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~  157 (252)
                      .|+|||++.+..++.++||||+||++|+|++|..||......+....+..                       +....+ 
T Consensus       206 ~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~-----------------------~~~~~~-  261 (335)
T 2owb_A          206 NYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKK-----------------------NEYSIP-  261 (335)
T ss_dssp             SSCCHHHHHTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHH-----------------------TCCCCC-
T ss_pred             cccCHHHhccCCCCchhhHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHhc-----------------------CCCCCC-
Confidence            99999999988899999999999999999999999987654443322211                       111111 


Q ss_pred             cccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCCCCCHH
Q 025467          158 GAASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAR  237 (252)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~ta~  237 (252)
                                                                            ...+..+.+||.+||+.||++|||++
T Consensus       262 ------------------------------------------------------~~~~~~~~~li~~~l~~dp~~Rps~~  287 (335)
T 2owb_A          262 ------------------------------------------------------KHINPVAASLIQKMLQTDPTARPTIN  287 (335)
T ss_dssp             ------------------------------------------------------TTSCHHHHHHHHHHTCSSGGGSCCGG
T ss_pred             ------------------------------------------------------ccCCHHHHHHHHHHccCChhHCcCHH
Confidence                                                                  12345789999999999999999999


Q ss_pred             HHHcCCCCCCcc
Q 025467          238 EALRHPFFTRDH  249 (252)
Q Consensus       238 e~l~hpwf~~~~  249 (252)
                      |+++||||....
T Consensus       288 ell~~~~~~~~~  299 (335)
T 2owb_A          288 ELLNDEFFTSGY  299 (335)
T ss_dssp             GGGGSHHHHTSC
T ss_pred             HHhcCccccCCC
Confidence            999999998653

>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*

Probab=99.96  E-value=2.7e-30  Score=208.62  Aligned_cols=144  Identities=31%  Similarity=0.466  Sum_probs=102.4

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCC--CccccCCC
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ--NYIVSTRH   78 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~--~~~~~t~~   78 (252)
                      ||+|||++||+||||||+||+++.+                           +.++|+|||.+.......  ....+++.
T Consensus       123 ~l~~lH~~~i~H~dl~p~Nil~~~~---------------------------~~~~l~dfg~~~~~~~~~~~~~~~~~~~  175 (276)
T 2h6d_A          123 AVDYCHRHMVVHRDLKPENVLLDAH---------------------------MNAKIADFGLSNMMSDGEFLRTSCGSPN  175 (276)
T ss_dssp             HHHHHHHHCSSCCCCCGGGEEECTT---------------------------SCEEECCCCGGGCCCC------------
T ss_pred             HHHHHHHCCCccCCCChhhEEECCC---------------------------CCEEEeecccccccCCCcceecccCCcc
Confidence            5899999999999999999999543                           456777777665433321  22467889


Q ss_pred             cccchhhhcCCC-CccchhHhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHHHHHHhhcCCCCCCc
Q 025467           79 YRAPEVILGLGW-TYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPE  157 (252)
Q Consensus        79 y~aPE~l~~~~~-~~~~Diws~G~~l~~l~~g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~  157 (252)
                      |+|||.+.+..+ +.++||||+|++++++++|..||...........+..                       +....+ 
T Consensus       176 y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~-----------------------~~~~~~-  231 (276)
T 2h6d_A          176 YAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHVPTLFKKIRG-----------------------GVFYIP-  231 (276)
T ss_dssp             -CCTGGGTTSCCCHHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHH-----------------------CCCCCC-
T ss_pred             ccCHHHHcCCCCCCccchHHHHHHHHHHHHhCCCCCCCCcHHHHHHHhhc-----------------------CcccCc-
Confidence            999999987765 6899999999999999999999976554333322211                       111111 


Q ss_pred             cccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCCCCCHH
Q 025467          158 GAASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAR  237 (252)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~ta~  237 (252)
                                                                            ...+..+.+||.+||+.||.+|||++
T Consensus       232 ------------------------------------------------------~~~~~~l~~li~~~l~~~p~~Rps~~  257 (276)
T 2h6d_A          232 ------------------------------------------------------EYLNRSVATLLMHMLQVDPLKRATIK  257 (276)
T ss_dssp             ------------------------------------------------------TTSCHHHHHHHHHHTCSSGGGSCCHH
T ss_pred             ------------------------------------------------------hhcCHHHHHHHHHHccCChhhCCCHH
Confidence                                                                  12345789999999999999999999


Q ss_pred             HHHcCCCCCCcc
Q 025467          238 EALRHPFFTRDH  249 (252)
Q Consensus       238 e~l~hpwf~~~~  249 (252)
                      ++++||||++..
T Consensus       258 ~~l~h~~~~~~~  269 (276)
T 2h6d_A          258 DIREHEWFKQDL  269 (276)
T ss_dssp             HHHHSHHHHTTC
T ss_pred             HHHhChhhccCc
Confidence            999999998753

>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*

Probab=99.96  E-value=3.3e-30  Score=210.09  Aligned_cols=144  Identities=33%  Similarity=0.503  Sum_probs=110.8

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCC---CCccccCC
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD---QNYIVSTR   77 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~---~~~~~~t~   77 (252)
                      ||+|||++||+||||||+||+++.                           .+.++|+|||.+......   .....||+
T Consensus       127 ~l~~lH~~~i~H~dl~p~Nil~~~---------------------------~~~~kl~dfg~~~~~~~~~~~~~~~~~~~  179 (294)
T 2rku_A          127 GCQYLHRNRVIHRDLKLGNLFLNE---------------------------DLEVKIGDFGLATKVEYDGERKKVLCGTP  179 (294)
T ss_dssp             HHHHHHHTTEECCCCCGGGEEECT---------------------------TCCEEECCCTTCEECCSTTCCBCCCCSCC
T ss_pred             HHHHHHHCCccccCCChHhEEEcC---------------------------CCCEEEEeccCceecccCccccccccCCC
Confidence            689999999999999999999954                           445677777776543221   22346889


Q ss_pred             CcccchhhhcCCCCccchhHhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHHHHHHhhcCCCCCCc
Q 025467           78 HYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPE  157 (252)
Q Consensus        78 ~y~aPE~l~~~~~~~~~Diws~G~~l~~l~~g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~  157 (252)
                      .|+|||++.+..++.++||||+||++|+|++|..||......+....+..                       +....+ 
T Consensus       180 ~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~-----------------------~~~~~~-  235 (294)
T 2rku_A          180 NYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKK-----------------------NEYSIP-  235 (294)
T ss_dssp             SSCCHHHHTTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHT-----------------------TCCCCC-
T ss_pred             CcCCcchhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhh-----------------------ccCCCc-
Confidence            99999999888889999999999999999999999987654433222111                       111111 


Q ss_pred             cccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCCCCCHH
Q 025467          158 GAASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAR  237 (252)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~ta~  237 (252)
                                                                            ...+..+.+|+.+||+.||++|||++
T Consensus       236 ------------------------------------------------------~~~~~~~~~li~~~l~~~p~~Rps~~  261 (294)
T 2rku_A          236 ------------------------------------------------------KHINPVAASLIQKMLQTDPTARPTIN  261 (294)
T ss_dssp             ------------------------------------------------------TTSCHHHHHHHHHHTCSSGGGSCCGG
T ss_pred             ------------------------------------------------------cccCHHHHHHHHHHcccChhhCcCHH
Confidence                                                                  12345889999999999999999999


Q ss_pred             HHHcCCCCCCcc
Q 025467          238 EALRHPFFTRDH  249 (252)
Q Consensus       238 e~l~hpwf~~~~  249 (252)
                      ++++||||+...
T Consensus       262 ~ll~~~~~~~~~  273 (294)
T 2rku_A          262 ELLNDEFFTSGY  273 (294)
T ss_dssp             GGGGSHHHHTSC
T ss_pred             HHhhChheecCC
Confidence            999999998754

>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}

Probab=99.96  E-value=8e-30  Score=208.74  Aligned_cols=144  Identities=26%  Similarity=0.537  Sum_probs=108.2

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCC-----Ccccc
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ-----NYIVS   75 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~-----~~~~~   75 (252)
                      ||+|||++||+||||||+||+++.+                           +.++|+|||.+.......     ....|
T Consensus       121 al~~LH~~~i~H~dlkp~NIl~~~~---------------------------~~~kl~dfg~~~~~~~~~~~~~~~~~~~  173 (305)
T 2wtk_C          121 GLEYLHSQGIVHKDIKPGNLLLTTG---------------------------GTLKISALGVAEALHPFAADDTCRTSQG  173 (305)
T ss_dssp             HHHHHHHTTEECSCCSGGGEEECTT---------------------------CCEEECCCTTCEECCTTCSSCEECCCCS
T ss_pred             HHHHHHHCCeeecCCCcccEEEcCC---------------------------CcEEeeccccccccCccccccccccCCC
Confidence            6899999999999999999999544                           456667777665432211     12368


Q ss_pred             CCCcccchhhhcCCC--CccchhHhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHHHHHHhhcCCC
Q 025467           76 TRHYRAPEVILGLGW--TYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRL  153 (252)
Q Consensus        76 t~~y~aPE~l~~~~~--~~~~Diws~G~~l~~l~~g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~  153 (252)
                      |+.|+|||++.+...  +.++||||+||++|+|++|..||.+.+.......+..                       +..
T Consensus       174 ~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~i~~-----------------------~~~  230 (305)
T 2wtk_C          174 SPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDNIYKLFENIGK-----------------------GSY  230 (305)
T ss_dssp             CGGGCCHHHHTCCSCEESHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHH-----------------------CCC
T ss_pred             CCCCcChhhccCcccCCcchhhHHHHHHHHHHHHhCCCCCCCchHHHHHHHHhc-----------------------CCC
Confidence            899999999986543  6789999999999999999999987654433332211                       111


Q ss_pred             CCCccccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCCC
Q 025467          154 DWPEGAASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDR  233 (252)
Q Consensus       154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R  233 (252)
                      ..+                                                       ...+..+.+||.+||+.||.+|
T Consensus       231 ~~~-------------------------------------------------------~~~~~~l~~li~~~l~~dp~~R  255 (305)
T 2wtk_C          231 AIP-------------------------------------------------------GDCGPPLSDLLKGMLEYEPAKR  255 (305)
T ss_dssp             CCC-------------------------------------------------------SSSCHHHHHHHHHHTCSSTTTS
T ss_pred             CCC-------------------------------------------------------CccCHHHHHHHHHHccCChhhC
Confidence            111                                                       1234688999999999999999


Q ss_pred             CCHHHHHcCCCCCCcc
Q 025467          234 LTAREALRHPFFTRDH  249 (252)
Q Consensus       234 ~ta~e~l~hpwf~~~~  249 (252)
                      ||++|+++||||+...
T Consensus       256 ps~~~ll~~~~~~~~~  271 (305)
T 2wtk_C          256 FSIRQIRQHSWFRKKH  271 (305)
T ss_dssp             CCHHHHHHSHHHHSCC
T ss_pred             CCHHHHhcCcccccCC
Confidence            9999999999998654

>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*

Probab=99.96  E-value=1.1e-29  Score=207.16  Aligned_cols=148  Identities=32%  Similarity=0.537  Sum_probs=111.0

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCC--CccccCCC
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ--NYIVSTRH   78 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~--~~~~~t~~   78 (252)
                      ||+|||++||+||||||+||+++.                           .+.++|+|||.+.......  ....+++.
T Consensus       136 ~l~~lH~~~i~H~dl~p~Nil~~~---------------------------~~~~kl~dfg~~~~~~~~~~~~~~~~~~~  188 (298)
T 1phk_A          136 VICALHKLNIVHRDLKPENILLDD---------------------------DMNIKLTDFGFSCQLDPGEKLREVCGTPS  188 (298)
T ss_dssp             HHHHHHHTTEECSCCSGGGEEECT---------------------------TCCEEECCCTTCEECCTTCCBCCCCSCGG
T ss_pred             HHHHHHHCCcccCCCCcceEEEcC---------------------------CCcEEEecccchhhcCCCcccccccCCcc
Confidence            689999999999999999999944                           4457777777775433222  23468899


Q ss_pred             cccchhhh------cCCCCccchhHhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHHHHHHhhcCC
Q 025467           79 YRAPEVIL------GLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGR  152 (252)
Q Consensus        79 y~aPE~l~------~~~~~~~~Diws~G~~l~~l~~g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~  152 (252)
                      |+|||++.      ...++.++||||+||++|+|++|..||.+.+.......+....                       
T Consensus       189 y~aPE~~~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~-----------------------  245 (298)
T 1phk_A          189 YLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGN-----------------------  245 (298)
T ss_dssp             GCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTC-----------------------
T ss_pred             ccCHHHhccccccccccCCcccccHhHHHHHHHHHHCCCCCcCccHHHHHHHHhcCC-----------------------
Confidence            99999986      3457889999999999999999999998766544433322211                       


Q ss_pred             CCCCccccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCC
Q 025467          153 LDWPEGAASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTD  232 (252)
Q Consensus       153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~  232 (252)
                      ...+.                                                   ..+...+..+.+||.+||+.||.+
T Consensus       246 ~~~~~---------------------------------------------------~~~~~~~~~l~~li~~~l~~dp~~  274 (298)
T 1phk_A          246 YQFGS---------------------------------------------------PEWDDYSDTVKDLVSRFLVVQPQK  274 (298)
T ss_dssp             CCCCT---------------------------------------------------TTGGGSCHHHHHHHHHHCCSSGGG
T ss_pred             cccCc---------------------------------------------------ccccccCHHHHHHHHHHccCCccc
Confidence            10000                                                   001234568999999999999999


Q ss_pred             CCCHHHHHcCCCCCCcc
Q 025467          233 RLTAREALRHPFFTRDH  249 (252)
Q Consensus       233 R~ta~e~l~hpwf~~~~  249 (252)
                      |||+.++++||||++..
T Consensus       275 Rps~~~ll~h~~~~~~~  291 (298)
T 1phk_A          275 RYTAEEALAHPFFQQYV  291 (298)
T ss_dssp             SCCHHHHTTSGGGCTTC
T ss_pred             CCCHHHHHhChHhhhcc
Confidence            99999999999998754

>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7

Probab=99.96  E-value=2.8e-30  Score=216.13  Aligned_cols=147  Identities=30%  Similarity=0.445  Sum_probs=105.7

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCC----CCccccC
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD----QNYIVST   76 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~----~~~~~~t   76 (252)
                      ||+|||++||+||||||+|||++.                           .+.++|+|||++......    ....+||
T Consensus       171 aL~~LH~~~ivH~Dlkp~NIll~~---------------------------~~~~kl~DfG~a~~~~~~~~~~~~~~~gt  223 (355)
T 1vzo_A          171 ALEHLHKLGIIYRDIKLENILLDS---------------------------NGHVVLTDFGLSKEFVADETERAYDFCGT  223 (355)
T ss_dssp             HHHHHHHTTCCCCCCCGGGEEECT---------------------------TSCEEESCSSEEEECCGGGGGGGCGGGSC
T ss_pred             HHHHHHHCCcccCCCCHHHEEECC---------------------------CCcEEEeeCCCCeecccCCCCcccCcccC
Confidence            689999999999999999999954                           445677777766543221    1224789


Q ss_pred             CCcccchhhhcC--CCCccchhHhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHHHHHHhhcCCCC
Q 025467           77 RHYRAPEVILGL--GWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLD  154 (252)
Q Consensus        77 ~~y~aPE~l~~~--~~~~~~Diws~G~~l~~l~~g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~  154 (252)
                      +.|+|||++.+.  .++.++||||+||++|+|++|..||...........+...                   .......
T Consensus       224 ~~y~aPE~~~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~~~~~-------------------~~~~~~~  284 (355)
T 1vzo_A          224 IEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISRR-------------------ILKSEPP  284 (355)
T ss_dssp             CTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCCCHHHHHHH-------------------HHHCCCC
T ss_pred             cCccChhhhcCCCCCCCchhhHHHHHHHHHHHHHCCCCCccCCccchHHHHHHH-------------------HhccCCC
Confidence            999999999863  4788999999999999999999999754321111111100                   0000010


Q ss_pred             CCccccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCCCC
Q 025467          155 WPEGAASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRL  234 (252)
Q Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~  234 (252)
                      .                                                       ....+..+.+||.+||+.||.+||
T Consensus       285 ~-------------------------------------------------------~~~~~~~~~~li~~~L~~dP~~R~  309 (355)
T 1vzo_A          285 Y-------------------------------------------------------PQEMSALAKDLIQRLLMKDPKKRL  309 (355)
T ss_dssp             C-------------------------------------------------------CTTSCHHHHHHHHHHTCSSGGGST
T ss_pred             C-------------------------------------------------------CcccCHHHHHHHHHHhhhCHHHhc
Confidence            1                                                       123456889999999999999999


Q ss_pred             -----CHHHHHcCCCCCCc
Q 025467          235 -----TAREALRHPFFTRD  248 (252)
Q Consensus       235 -----ta~e~l~hpwf~~~  248 (252)
                           |++|+++||||+..
T Consensus       310 ~~~~~s~~ell~h~~f~~~  328 (355)
T 1vzo_A          310 GCGPRDADEIKEHLFFQKI  328 (355)
T ss_dssp             TSSTTTHHHHHTSGGGTTC
T ss_pred             CCCCCCHHHHHcCcchhcC
Confidence                 99999999999864

>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}

Probab=99.96  E-value=4.5e-30  Score=212.21  Aligned_cols=147  Identities=24%  Similarity=0.473  Sum_probs=105.0

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCC---CCccccCC
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD---QNYIVSTR   77 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~---~~~~~~t~   77 (252)
                      ||+|||++||+||||||+||+++.                           .+.++|+|||.+......   .....|++
T Consensus       141 ~l~~lH~~~ivH~dlkp~NIl~~~---------------------------~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~  193 (326)
T 2x7f_A          141 GLSHLHQHKVIHRDIKGQNVLLTE---------------------------NAEVKLVDFGVSAQLDRTVGRRNTFIGTP  193 (326)
T ss_dssp             HHHHHHHTTCCCCCCSGGGEEECT---------------------------TCCEEECCCTTTC-------------CCG
T ss_pred             HHHHHHHCCccccCCcHHHEEEcC---------------------------CCCEEEeeCcCceecCcCccccccccCCc
Confidence            689999999999999999999954                           345677777766543221   12246889


Q ss_pred             Ccccchhhh-----cCCCCccchhHhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHHHHHHhhcCC
Q 025467           78 HYRAPEVIL-----GLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGR  152 (252)
Q Consensus        78 ~y~aPE~l~-----~~~~~~~~Diws~G~~l~~l~~g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~  152 (252)
                      .|+|||++.     ...++.++||||+||++|+|++|..||.+.........+..  +..+                   
T Consensus       194 ~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~--~~~~-------------------  252 (326)
T 2x7f_A          194 YWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRALFLIPR--NPAP-------------------  252 (326)
T ss_dssp             GGCCHHHHC--------CCTTHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHH--SCCC-------------------
T ss_pred             cccChhhhccccccCcCCCccchHHHHHHHHHHHHhCCCCCCCCcHHHHHHHhhc--Cccc-------------------
Confidence            999999987     45688999999999999999999999977654433322111  0000                   


Q ss_pred             CCCCccccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCC
Q 025467          153 LDWPEGAASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTD  232 (252)
Q Consensus       153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~  232 (252)
                       ..                                                      .....+..+.+||.+||..||.+
T Consensus       253 -~~------------------------------------------------------~~~~~~~~l~~li~~~l~~dp~~  277 (326)
T 2x7f_A          253 -RL------------------------------------------------------KSKKWSKKFQSFIESCLVKNHSQ  277 (326)
T ss_dssp             -CC------------------------------------------------------SCSCSCHHHHHHHHHHCCSSGGG
T ss_pred             -cC------------------------------------------------------CccccCHHHHHHHHHHhccChhh
Confidence             00                                                      01223568999999999999999


Q ss_pred             CCCHHHHHcCCCCCCccc
Q 025467          233 RLTAREALRHPFFTRDHL  250 (252)
Q Consensus       233 R~ta~e~l~hpwf~~~~~  250 (252)
                      |||++++++||||++.+.
T Consensus       278 Rps~~~ll~hp~~~~~~~  295 (326)
T 2x7f_A          278 RPATEQLMKHPFIRDQPN  295 (326)
T ss_dssp             SCCHHHHHTSHHHHCCTT
T ss_pred             CCCHHHHhhChHHhhCcc
Confidence            999999999999987643

>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}

Probab=99.96  E-value=8.8e-30  Score=207.44  Aligned_cols=149  Identities=23%  Similarity=0.381  Sum_probs=107.1

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCC---CCccccCC
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD---QNYIVSTR   77 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~---~~~~~~t~   77 (252)
                      ||+|||++||+||||||+||+++.                          ..+.++|+|||.+......   .....|++
T Consensus       134 ~l~~lH~~~i~H~dl~p~Nil~~~--------------------------~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~  187 (295)
T 2clq_A          134 GLKYLHDNQIVHRDIKGDNVLINT--------------------------YSGVLKISDFGTSKRLAGINPCTETFTGTL  187 (295)
T ss_dssp             HHHHHHHTTEECCCCSGGGEEEET--------------------------TTCCEEECCTTTCEESCC-----CCCCCCG
T ss_pred             HHHHHHhCCEEccCCChhhEEEEC--------------------------CCCCEEEeecccccccCCCCCcccccCCCc
Confidence            689999999999999999999954                          1345677777777543321   12346889


Q ss_pred             CcccchhhhcCC--CCccchhHhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHHHHHHhhcCCCCC
Q 025467           78 HYRAPEVILGLG--WTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDW  155 (252)
Q Consensus        78 ~y~aPE~l~~~~--~~~~~Diws~G~~l~~l~~g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~  155 (252)
                      .|+|||++.+..  ++.++||||+||++|+|++|..||..................                    ..  
T Consensus       188 ~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~--------------------~~--  245 (295)
T 2clq_A          188 QYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQAAMFKVGMFKV--------------------HP--  245 (295)
T ss_dssp             GGCCHHHHHHGGGGCSHHHHHHHHHHHHHHHHHTSCTTGGGSSHHHHHHHHHHHCC--------------------CC--
T ss_pred             cccChhhhcCCCCCCCcHHHHHHHHHHHHHHHHCCCCccCCCchhHHHHhhccccc--------------------cc--
Confidence            999999997653  789999999999999999999999654332211110000000                    00  


Q ss_pred             CccccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCCCCC
Q 025467          156 PEGAASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLT  235 (252)
Q Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~t  235 (252)
                                                                           ......+.++.+||.+||+.||++|||
T Consensus       246 -----------------------------------------------------~~~~~~~~~~~~li~~~l~~dp~~Rps  272 (295)
T 2clq_A          246 -----------------------------------------------------EIPESMSAEAKAFILKCFEPDPDKRAC  272 (295)
T ss_dssp             -----------------------------------------------------CCCTTSCHHHHHHHHHTTCSSTTTSCC
T ss_pred             -----------------------------------------------------cccccCCHHHHHHHHHHccCChhhCCC
Confidence                                                                 001234568899999999999999999


Q ss_pred             HHHHHcCCCCCCccc
Q 025467          236 AREALRHPFFTRDHL  250 (252)
Q Consensus       236 a~e~l~hpwf~~~~~  250 (252)
                      ++++|+||||+....
T Consensus       273 ~~~ll~~~~~~~~~~  287 (295)
T 2clq_A          273 ANDLLVDEFLKVSSK  287 (295)
T ss_dssp             HHHHHTSGGGCC---
T ss_pred             HHHHhcChhhhhccc
Confidence            999999999987654

>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*

Probab=99.96  E-value=8.5e-31  Score=217.74  Aligned_cols=154  Identities=31%  Similarity=0.508  Sum_probs=93.3

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCC-CccccCCCc
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ-NYIVSTRHY   79 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~-~~~~~t~~y   79 (252)
                      ||+|||++||+||||||+|||++.++                        ....++|+|||.+....... ....+|+.|
T Consensus       140 ~l~~LH~~~ivH~dlkp~NIll~~~~------------------------~~~~~kl~Dfg~~~~~~~~~~~~~~~t~~y  195 (336)
T 3fhr_A          140 AIQFLHSHNIAHRDVKPENLLYTSKE------------------------KDAVLKLTDFGFAKETTQNALQTPCYTPYY  195 (336)
T ss_dssp             HHHHHHHTTEECSCCSGGGEEESCSS------------------------TTCCEEECCCTTCEEC--------------
T ss_pred             HHHHHHhCCeecCCCCHHHEEEEecC------------------------CCceEEEeccccceeccccccccCCCCcCc
Confidence            68999999999999999999995432                        23458899999886543322 334679999


Q ss_pred             ccchhhhcCCCCccchhHhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHHHHHHhhcCCCCCCccc
Q 025467           80 RAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGA  159 (252)
Q Consensus        80 ~aPE~l~~~~~~~~~Diws~G~~l~~l~~g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~  159 (252)
                      +|||++.+..++.++||||+||++|++++|..||.+.........+..                   ....+....+   
T Consensus       196 ~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~-------------------~~~~~~~~~~---  253 (336)
T 3fhr_A          196 VAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGMKR-------------------RIRLGQYGFP---  253 (336)
T ss_dssp             --------CHHHHHHHHHHHHHHHHHHHHSSCCC----------------------------------------CCC---
T ss_pred             cChhhhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCccchhhhhhHHH-------------------hhhccccccC---
Confidence            999999888889999999999999999999999975443221110000                   0000000000   


Q ss_pred             cchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCCCCCHHHH
Q 025467          160 ASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREA  239 (252)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~ta~e~  239 (252)
                                                                      ...+...+.++.+||.+||+.||.+|||++|+
T Consensus       254 ------------------------------------------------~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~el  285 (336)
T 3fhr_A          254 ------------------------------------------------NPEWSEVSEDAKQLIRLLLKTDPTERLTITQF  285 (336)
T ss_dssp             ------------------------------------------------TTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHH
T ss_pred             ------------------------------------------------chhhccCCHHHHHHHHHHCCCChhHCcCHHHH
Confidence                                                            01113456789999999999999999999999


Q ss_pred             HcCCCCCCc
Q 025467          240 LRHPFFTRD  248 (252)
Q Consensus       240 l~hpwf~~~  248 (252)
                      |+||||+..
T Consensus       286 l~hp~~~~~  294 (336)
T 3fhr_A          286 MNHPWINQS  294 (336)
T ss_dssp             HHSHHHHTG
T ss_pred             hcCcccccc
Confidence            999999764

>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*

Probab=99.96  E-value=5e-30  Score=211.75  Aligned_cols=153  Identities=33%  Similarity=0.528  Sum_probs=111.7

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCC--CccccCCC
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ--NYIVSTRH   78 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~--~~~~~t~~   78 (252)
                      ||+|||++||+||||||+|||++..+                        ....++|+|||.+.......  ....||+.
T Consensus       126 ~l~~lH~~~ivH~dlkp~NIl~~~~~------------------------~~~~~kl~Dfg~~~~~~~~~~~~~~~gt~~  181 (322)
T 2ycf_A          126 AVQYLHENGIIHRDLKPENVLLSSQE------------------------EDCLIKITDFGHSKILGETSLMRTLCGTPT  181 (322)
T ss_dssp             HHHHHHHTTEECCCCSGGGEEESSSS------------------------SSCCEEECCCTTCEECCCCHHHHHHHSCCT
T ss_pred             HHHHHHHCCeeccCCCHHHEEEecCC------------------------CCCeEEEccCccceecccccccccccCCcC
Confidence            68999999999999999999995432                        23357899999887654332  12468999


Q ss_pred             cccchhhh---cCCCCccchhHhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHHHHHHhhcCCCCC
Q 025467           79 YRAPEVIL---GLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDW  155 (252)
Q Consensus        79 y~aPE~l~---~~~~~~~~Diws~G~~l~~l~~g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~  155 (252)
                      |+|||++.   ...++.++||||+||++|++++|..||........+.....                      .+....
T Consensus       182 y~aPE~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~----------------------~~~~~~  239 (322)
T 2ycf_A          182 YLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQIT----------------------SGKYNF  239 (322)
T ss_dssp             TCCHHHHHHTTTTTCTTHHHHHHHHHHHHHHHHSSCSSCSTTCSSCHHHHHH----------------------HTCCCC
T ss_pred             ccCchhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchHHHHHHHHH----------------------hCcccc
Confidence            99999985   35688999999999999999999999975433211111000                      010100


Q ss_pred             CccccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCCCCC
Q 025467          156 PEGAASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLT  235 (252)
Q Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~t  235 (252)
                      .                                                   ...+...+..+.+||.+||+.||++|||
T Consensus       240 ~---------------------------------------------------~~~~~~~~~~~~~li~~~l~~dP~~Rps  268 (322)
T 2ycf_A          240 I---------------------------------------------------PEVWAEVSEKALDLVKKLLVVDPKARFT  268 (322)
T ss_dssp             C---------------------------------------------------HHHHTTSCHHHHHHHHHHSCSSTTTSCC
T ss_pred             C---------------------------------------------------chhhhhcCHHHHHHHHHHcccCHhhCCC
Confidence            0                                                   0111234568999999999999999999


Q ss_pred             HHHHHcCCCCCCccc
Q 025467          236 AREALRHPFFTRDHL  250 (252)
Q Consensus       236 a~e~l~hpwf~~~~~  250 (252)
                      +.++|+||||+....
T Consensus       269 ~~~~l~h~~~~~~~~  283 (322)
T 2ycf_A          269 TEEALRHPWLQDEDM  283 (322)
T ss_dssp             HHHHHTSGGGCCHHH
T ss_pred             HHHHhhCcCcCCHHH
Confidence            999999999987643

>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}

Probab=99.96  E-value=1.3e-29  Score=208.42  Aligned_cols=147  Identities=27%  Similarity=0.472  Sum_probs=110.9

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCC---CCccccCC
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD---QNYIVSTR   77 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~---~~~~~~t~   77 (252)
                      ||+|||++||+|+||||+||+++.                           .+.++|+|||.+......   .....|++
T Consensus       137 ~l~~lH~~~i~H~dl~p~Nil~~~---------------------------~~~~kl~dfg~~~~~~~~~~~~~~~~~~~  189 (314)
T 3com_A          137 GLEYLHFMRKIHRDIKAGNILLNT---------------------------EGHAKLADFGVAGQLTDTMAKRNTVIGTP  189 (314)
T ss_dssp             HHHHHHHTTEECCCCSGGGEEECT---------------------------TCCEEECCCTTCEECBTTBSCBCCCCSCG
T ss_pred             HHHHHHhCCCcCCCcCHHHEEECC---------------------------CCCEEEeecccchhhhhhccccCccCCCC
Confidence            689999999999999999999954                           345677777776543222   12346888


Q ss_pred             CcccchhhhcCCCCccchhHhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHHHHHHhhcCCCCCCc
Q 025467           78 HYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPE  157 (252)
Q Consensus        78 ~y~aPE~l~~~~~~~~~Diws~G~~l~~l~~g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~  157 (252)
                      .|+|||++.+..++.++||||+||++|+|++|..||...........+...  .                    ..... 
T Consensus       190 ~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~--~--------------------~~~~~-  246 (314)
T 3com_A          190 FWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPYADIHPMRAIFMIPTN--P--------------------PPTFR-  246 (314)
T ss_dssp             GGCCHHHHSSSCBCTTHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHS--C--------------------CCCCS-
T ss_pred             CccChhhcCCCCCCccccHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcC--C--------------------CcccC-
Confidence            999999999888999999999999999999999999876544332221110  0                    00000 


Q ss_pred             cccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCCCCCHH
Q 025467          158 GAASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAR  237 (252)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~ta~  237 (252)
                                                                          .....+..+.+||.+||..||.+|||+.
T Consensus       247 ----------------------------------------------------~~~~~~~~l~~li~~~l~~dp~~Rpt~~  274 (314)
T 3com_A          247 ----------------------------------------------------KPELWSDNFTDFVKQCLVKSPEQRATAT  274 (314)
T ss_dssp             ----------------------------------------------------SGGGSCHHHHHHHHHHTCSCTTTSCCHH
T ss_pred             ----------------------------------------------------CcccCCHHHHHHHHHHccCChhhCcCHH
Confidence                                                                0112346899999999999999999999


Q ss_pred             HHHcCCCCCCcc
Q 025467          238 EALRHPFFTRDH  249 (252)
Q Consensus       238 e~l~hpwf~~~~  249 (252)
                      ++++||||+...
T Consensus       275 ~ll~~~~~~~~~  286 (314)
T 3com_A          275 QLLQHPFVRSAK  286 (314)
T ss_dssp             HHTTSHHHHTCC
T ss_pred             HHHhCHHHhcCC
Confidence            999999998764

>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*

Probab=99.96  E-value=6.2e-30  Score=209.01  Aligned_cols=155  Identities=28%  Similarity=0.456  Sum_probs=103.7

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCC--------CCc
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD--------QNY   72 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~--------~~~   72 (252)
                      ||+|||++||+||||||+||+++.++.                           ++|+|||.+......        ...
T Consensus       133 ~l~~lH~~~i~H~dl~p~Nil~~~~~~---------------------------~kl~dfg~~~~~~~~~~~~~~~~~~~  185 (303)
T 2vwi_A          133 GLEYLHKNGQIHRDVKAGNILLGEDGS---------------------------VQIADFGVSAFLATGGDITRNKVRKT  185 (303)
T ss_dssp             HHHHHHHTTCCCCCCSGGGEEECTTCC---------------------------EEECCCHHHHHCC-------------
T ss_pred             HHHHHHhCCCCCCCCChhhEEEcCCCC---------------------------EEEEeccchheeccCCCccchhhhcc
Confidence            689999999999999999999965544                           555555554322111        122


Q ss_pred             cccCCCcccchhhhc-CCCCccchhHhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHHHHHHhhcC
Q 025467           73 IVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRG  151 (252)
Q Consensus        73 ~~~t~~y~aPE~l~~-~~~~~~~Diws~G~~l~~l~~g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~  151 (252)
                      ..||+.|+|||++.+ ..++.++||||+||++|++++|..||..............  +..+                  
T Consensus       186 ~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~--~~~~------------------  245 (303)
T 2vwi_A          186 FVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLTLQ--NDPP------------------  245 (303)
T ss_dssp             --CCCTTCCHHHHHHHHCCCTHHHHHHHHHHHHHHHHSSCTTTTSCGGGHHHHHHT--SSCC------------------
T ss_pred             cCCCccccCHHHhccccCCCchhhHHHHHHHHHHHHhCCCCCccCchhhHHHHHhc--cCCC------------------
Confidence            368899999999876 4688999999999999999999999987654433221111  0000                  


Q ss_pred             CCCCCccccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCC
Q 025467          152 RLDWPEGAASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPT  231 (252)
Q Consensus       152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~  231 (252)
                        .....                                              ..........+.++.+||.+||+.||.
T Consensus       246 --~~~~~----------------------------------------------~~~~~~~~~~~~~~~~li~~~l~~dp~  277 (303)
T 2vwi_A          246 --SLETG----------------------------------------------VQDKEMLKKYGKSFRKMISLCLQKDPE  277 (303)
T ss_dssp             --CTTC---------------------------------------------------CCCCCCCHHHHHHHHHHCCSSGG
T ss_pred             --ccccc----------------------------------------------cccchhhhhhhHHHHHHHHHHccCChh
Confidence              00000                                              000011233456899999999999999


Q ss_pred             CCCCHHHHHcCCCCCCccc
Q 025467          232 DRLTAREALRHPFFTRDHL  250 (252)
Q Consensus       232 ~R~ta~e~l~hpwf~~~~~  250 (252)
                      +|||+.++++||||+....
T Consensus       278 ~Rps~~~ll~h~~~~~~~~  296 (303)
T 2vwi_A          278 KRPTAAELLRHKFFQKAKN  296 (303)
T ss_dssp             GSCCHHHHHTSTTC-----
T ss_pred             hCcCHHHHhhChhhhcCCC
Confidence            9999999999999987643

>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*

Probab=99.96  E-value=9.2e-30  Score=218.42  Aligned_cols=161  Identities=30%  Similarity=0.419  Sum_probs=109.8

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCC-------Ccc
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ-------NYI   73 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~-------~~~   73 (252)
                      ||+|||++||+||||||+|||++.++.......              .......++|+|||++.......       ...
T Consensus       127 aL~~LH~~~ivHrDLkp~NILl~~~~~~~~~~~--------------~~~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~  192 (434)
T 2rio_A          127 GVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQ--------------TGAENLRILISDFGLCKKLDSGQSSFRTNLNNP  192 (434)
T ss_dssp             HHHHHHHTTEECCCCSGGGEEEECCHHHHSCCT--------------TCCCSCEEEECCCTTCEECCC------------
T ss_pred             HHHHHHHCCccccCCChHhEEEecCcccccccc--------------cCCCceEEEEcccccceecCCCCccceeeecCC
Confidence            689999999999999999999976432111000              01234578999999887544321       124


Q ss_pred             ccCCCcccchhhhc-------CCCCccchhHhHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHHHH
Q 025467           74 VSTRHYRAPEVILG-------LGWTYPCDIWSVGCILVELCT-GEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAE  145 (252)
Q Consensus        74 ~~t~~y~aPE~l~~-------~~~~~~~Diws~G~~l~~l~~-g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~  145 (252)
                      .||+.|+|||++.+       ..++.++||||+||++|+|++ |..||.......  ..+..  +               
T Consensus       193 ~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~~--~~i~~--~---------------  253 (434)
T 2rio_A          193 SGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRE--SNIIR--G---------------  253 (434)
T ss_dssp             --CCTTSCHHHHSCCCTTSCCCCCCTHHHHHHHHHHHHHHHTTSCCTTCSTTTHH--HHHHH--T---------------
T ss_pred             CCCCCccCHHHhccccccccccCcchhhhhHhHHHHHHHHHhCCCCCCCCchhhH--HHHhc--C---------------
Confidence            78999999999976       568899999999999999999 999996543321  11111  0               


Q ss_pred             HHhhcCCCCCCccccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHh
Q 025467          146 KYVRRGRLDWPEGAASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGL  225 (252)
Q Consensus       146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~  225 (252)
                            ....+...                                                .......+.++.+||.+|
T Consensus       254 ------~~~~~~~~------------------------------------------------~~~~~~~~~~~~~li~~~  279 (434)
T 2rio_A          254 ------IFSLDEMK------------------------------------------------CLHDRSLIAEATDLISQM  279 (434)
T ss_dssp             ------CCCCCCCT------------------------------------------------TCCCHHHHHHHHHHHHHH
T ss_pred             ------CCCccccc------------------------------------------------ccccccchHHHHHHHHHH
Confidence                  01000000                                                000112356899999999


Q ss_pred             ccCCCCCCCCHHHHHcCCCCCCc
Q 025467          226 LRYDPTDRLTAREALRHPFFTRD  248 (252)
Q Consensus       226 L~~dP~~R~ta~e~l~hpwf~~~  248 (252)
                      |+.||.+|||+.++++||||...
T Consensus       280 L~~dP~~Rps~~eil~hp~f~~~  302 (434)
T 2rio_A          280 IDHDPLKRPTAMKVLRHPLFWPK  302 (434)
T ss_dssp             TCSSGGGSCCHHHHHTSGGGSCH
T ss_pred             hhCChhhCCCHHHHHhCCccCCc
Confidence            99999999999999999999754

>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*

Probab=99.96  E-value=1e-29  Score=208.10  Aligned_cols=145  Identities=29%  Similarity=0.437  Sum_probs=110.6

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCC---CCccccCC
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD---QNYIVSTR   77 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~---~~~~~~t~   77 (252)
                      ||+|||++||+||||||+||+++.                           .+.++|+|||.+......   .....|++
T Consensus       131 ~l~~lH~~~i~H~dl~p~Nil~~~---------------------------~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~  183 (303)
T 3a7i_A          131 GLDYLHSEKKIHRDIKAANVLLSE---------------------------HGEVKLADFGVAGQLTDTQIKRNTFVGTP  183 (303)
T ss_dssp             HHHHHHHTTEECCCCSGGGEEECT---------------------------TSCEEECCCTTCEECBTTBCCBCCCCSCG
T ss_pred             HHHHHHHCCCccCCCChheEEECC---------------------------CCCEEEeecccceecCccccccCccCCCc
Confidence            589999999999999999999944                           445677777776543222   12346888


Q ss_pred             CcccchhhhcCCCCccchhHhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHHHHHHhhcCCCCCCc
Q 025467           78 HYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPE  157 (252)
Q Consensus        78 ~y~aPE~l~~~~~~~~~Diws~G~~l~~l~~g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~  157 (252)
                      .|+|||++.+..++.++||||+||++|++++|..||...........+..  +.                    ..    
T Consensus       184 ~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~--~~--------------------~~----  237 (303)
T 3a7i_A          184 FWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPK--NN--------------------PP----  237 (303)
T ss_dssp             GGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHH--SC--------------------CC----
T ss_pred             CccCHHHHhcCCCCchhhhHHHHHHHHHHccCCCCCCCcCHHHHHHHhhc--CC--------------------CC----
Confidence            99999999988899999999999999999999999976654433322111  00                    00    


Q ss_pred             cccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCCCCCHH
Q 025467          158 GAASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAR  237 (252)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~ta~  237 (252)
                                                                         ......+..+.+||.+||+.||.+|||++
T Consensus       238 ---------------------------------------------------~~~~~~~~~l~~li~~~l~~dp~~Rps~~  266 (303)
T 3a7i_A          238 ---------------------------------------------------TLEGNYSKPLKEFVEACLNKEPSFRPTAK  266 (303)
T ss_dssp             ---------------------------------------------------CCCSSCCHHHHHHHHHHCCSSGGGSCCHH
T ss_pred             ---------------------------------------------------CCccccCHHHHHHHHHHcCCChhhCcCHH
Confidence                                                               00123456899999999999999999999


Q ss_pred             HHHcCCCCCCcc
Q 025467          238 EALRHPFFTRDH  249 (252)
Q Consensus       238 e~l~hpwf~~~~  249 (252)
                      ++++||||....
T Consensus       267 ~ll~~~~~~~~~  278 (303)
T 3a7i_A          267 ELLKHKFILRNA  278 (303)
T ss_dssp             HHTTCHHHHHHC
T ss_pred             HHhhChhhhcCC
Confidence            999999996543

>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*

Probab=99.96  E-value=1.2e-29  Score=207.43  Aligned_cols=148  Identities=26%  Similarity=0.433  Sum_probs=107.8

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccC---CCCCccccCC
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYER---PDQNYIVSTR   77 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~---~~~~~~~~t~   77 (252)
                      ||+|||++||+||||||+||+++.                           .+.++|+|||.+....   .......||.
T Consensus       129 ~l~~lH~~~i~H~dlkp~Nil~~~---------------------------~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~  181 (302)
T 2j7t_A          129 ALNFLHSKRIIHRDLKAGNVLMTL---------------------------EGDIRLADFGVSAKNLKTLQKRDSFIGTP  181 (302)
T ss_dssp             HHHHHHHTTCCCCCCSGGGEEECT---------------------------TSCEEECCCHHHHHHHHHHHC-----CCG
T ss_pred             HHHHHhcCCcccCCCCHHHEEECC---------------------------CCCEEEEECCCCccccccccccccccCCh
Confidence            589999999999999999999944                           4457777777653211   1112236888


Q ss_pred             Ccccchhhh-----cCCCCccchhHhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHHHHHHhhcCC
Q 025467           78 HYRAPEVIL-----GLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGR  152 (252)
Q Consensus        78 ~y~aPE~l~-----~~~~~~~~Diws~G~~l~~l~~g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~  152 (252)
                      .|+|||++.     ...++.++||||+||++|+|++|..||...+.......+....  .+                   
T Consensus       182 ~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~--~~-------------------  240 (302)
T 2j7t_A          182 YWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSD--PP-------------------  240 (302)
T ss_dssp             GGCCHHHHHHHHTTSTTTTTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSC--CC-------------------
T ss_pred             hhcCCeeeccccCCCCCCchhhhHHHHHHHHHHHhcCCCCCccCCHHHHHHHHhccC--Cc-------------------
Confidence            999999984     5568899999999999999999999998766544333222110  00                   


Q ss_pred             CCCCccccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCC
Q 025467          153 LDWPEGAASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTD  232 (252)
Q Consensus       153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~  232 (252)
                       ..                                                     ......+..+.+||.+||..||.+
T Consensus       241 -~~-----------------------------------------------------~~~~~~~~~l~~li~~~l~~dp~~  266 (302)
T 2j7t_A          241 -TL-----------------------------------------------------LTPSKWSVEFRDFLKIALDKNPET  266 (302)
T ss_dssp             -CC-----------------------------------------------------SSGGGSCHHHHHHHHHHSCSCTTT
T ss_pred             -cc-----------------------------------------------------CCccccCHHHHHHHHHHcccChhh
Confidence             00                                                     000123468899999999999999


Q ss_pred             CCCHHHHHcCCCCCCccc
Q 025467          233 RLTAREALRHPFFTRDHL  250 (252)
Q Consensus       233 R~ta~e~l~hpwf~~~~~  250 (252)
                      |||++++++||||+....
T Consensus       267 Rps~~~ll~h~~~~~~~~  284 (302)
T 2j7t_A          267 RPSAAQLLEHPFVSSITS  284 (302)
T ss_dssp             SCCHHHHTTSTTTTTCCC
T ss_pred             CCCHHHHhcChHHhhhcc
Confidence            999999999999998653

>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...

Probab=99.96  E-value=7.6e-30  Score=210.58  Aligned_cols=139  Identities=27%  Similarity=0.468  Sum_probs=106.6

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCC-CccccCCCc
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ-NYIVSTRHY   79 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~-~~~~~t~~y   79 (252)
                      ||+|||++||+||||||+|||++.                          ..+.++|+|||.+....... ....||+.|
T Consensus       161 ~L~~LH~~~ivH~Dlkp~NIll~~--------------------------~~~~~kL~Dfg~~~~~~~~~~~~~~gt~~y  214 (320)
T 3a99_A          161 AVRHCHNCGVLHRDIKDENILIDL--------------------------NRGELKLIDFGSGALLKDTVYTDFDGTRVY  214 (320)
T ss_dssp             HHHHHHHTTEECCCCSGGGEEEET--------------------------TTTEEEECCCTTCEECCSSCBCCCCSCGGG
T ss_pred             HHHHHHHCCcEeCCCCHHHEEEeC--------------------------CCCCEEEeeCccccccccccccCCCCCccC
Confidence            689999999999999999999952                          23457777887776543322 234689999


Q ss_pred             ccchhhhcCCC-CccchhHhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHHHHHHhhcCCCCCCcc
Q 025467           80 RAPEVILGLGW-TYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEG  158 (252)
Q Consensus        80 ~aPE~l~~~~~-~~~~Diws~G~~l~~l~~g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~  158 (252)
                      +|||++.+..+ +.++||||+||++|+|++|..||.....  ..                           .+....   
T Consensus       215 ~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~--~~---------------------------~~~~~~---  262 (320)
T 3a99_A          215 SPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE--II---------------------------RGQVFF---  262 (320)
T ss_dssp             SCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHHH--HH---------------------------HCCCCC---
T ss_pred             CChHHhccCCCCCccchHHhHHHHHHHHHHCCCCCCChhh--hh---------------------------cccccc---
Confidence            99999987765 6889999999999999999999964210  00                           000000   


Q ss_pred             ccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCCCCCHHH
Q 025467          159 AASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTARE  238 (252)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~ta~e  238 (252)
                                                                          ....++++.+||.+||+.||++|||+++
T Consensus       263 ----------------------------------------------------~~~~~~~~~~li~~~l~~dp~~Rps~~~  290 (320)
T 3a99_A          263 ----------------------------------------------------RQRVSSECQHLIRWCLALRPSDRPTFEE  290 (320)
T ss_dssp             ----------------------------------------------------SSCCCHHHHHHHHHHTCSSGGGSCCHHH
T ss_pred             ----------------------------------------------------cccCCHHHHHHHHHHccCChhhCcCHHH
Confidence                                                                0224568899999999999999999999


Q ss_pred             HHcCCCCCCcc
Q 025467          239 ALRHPFFTRDH  249 (252)
Q Consensus       239 ~l~hpwf~~~~  249 (252)
                      +++||||++..
T Consensus       291 ll~hp~~~~~~  301 (320)
T 3a99_A          291 IQNHPWMQDVL  301 (320)
T ss_dssp             HHTSGGGSSCC
T ss_pred             HhcCHhhcCcc
Confidence            99999998764

>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*

Probab=99.96  E-value=1.3e-29  Score=208.41  Aligned_cols=146  Identities=25%  Similarity=0.397  Sum_probs=106.7

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCC------CCccc
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD------QNYIV   74 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~------~~~~~   74 (252)
                      ||+|||++||+||||||+|||++.++                           .++|+|||.+......      .....
T Consensus       128 ~l~~lH~~~ivH~dlkp~Nil~~~~~---------------------------~~kl~Dfg~a~~~~~~~~~~~~~~~~~  180 (311)
T 3ork_A          128 ALNFSHQNGIIHRDVKPANIMISATN---------------------------AVKVMDFGIARAIADSGNSVTQTAAVI  180 (311)
T ss_dssp             HHHHHHHTTCCCCCCCGGGEEEETTS---------------------------CEEECCCSCC-----------------
T ss_pred             HHHHHHHCCCCcCCCCHHHEEEcCCC---------------------------CEEEeeccCcccccccccccccccccC
Confidence            68999999999999999999996544                           4566666666432221      11246


Q ss_pred             cCCCcccchhhhcCCCCccchhHhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHHHHHHhhcCCCC
Q 025467           75 STRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLD  154 (252)
Q Consensus        75 ~t~~y~aPE~l~~~~~~~~~Diws~G~~l~~l~~g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~  154 (252)
                      ||+.|+|||++.+..++.++||||+||++|+|++|..||.+................++.                    
T Consensus       181 gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~--------------------  240 (311)
T 3ork_A          181 GTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIPPS--------------------  240 (311)
T ss_dssp             -CCTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHCCCCCHH--------------------
T ss_pred             cCcccCCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCCCcc--------------------
Confidence            899999999999989999999999999999999999999877655444332221111110                    


Q ss_pred             CCccccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCCCC
Q 025467          155 WPEGAASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRL  234 (252)
Q Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~  234 (252)
                                                                            ......+.++.+||.+||+.||++||
T Consensus       241 ------------------------------------------------------~~~~~~~~~l~~li~~~l~~dP~~R~  266 (311)
T 3ork_A          241 ------------------------------------------------------ARHEGLSADLDAVVLKALAKNPENRY  266 (311)
T ss_dssp             ------------------------------------------------------HHSTTCCHHHHHHHHHHTCSSGGGSC
T ss_pred             ------------------------------------------------------cccCCCCHHHHHHHHHHHhcCHhhCh
Confidence                                                                  00123456899999999999999999


Q ss_pred             CHHHHHcCCCCCC
Q 025467          235 TAREALRHPFFTR  247 (252)
Q Consensus       235 ta~e~l~hpwf~~  247 (252)
                      |+.+++.|+|++.
T Consensus       267 ~~~~~l~~~l~~~  279 (311)
T 3ork_A          267 QTAAEMRADLVRV  279 (311)
T ss_dssp             SSHHHHHHHHHHH
T ss_pred             hhHHHHHHHHHHH
Confidence            9999999999863

>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*

Probab=99.96  E-value=2e-29  Score=210.11  Aligned_cols=163  Identities=21%  Similarity=0.383  Sum_probs=112.0

Q ss_pred             Chhhhhc-cCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCC-CCccccCCC
Q 025467            1 MFAVMHD-LCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD-QNYIVSTRH   78 (252)
Q Consensus         1 aL~~lH~-~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~-~~~~~~t~~   78 (252)
                      ||+|||+ +||+||||||+||+++.                           .+.++|+|||.+...... .....|+..
T Consensus       163 ~l~~lH~~~~i~H~dl~p~Nil~~~---------------------------~~~~kl~dfg~~~~~~~~~~~~~~~~~~  215 (348)
T 2pml_X          163 SFSYIHNEKNICHRDVKPSNILMDK---------------------------NGRVKLSDFGESEYMVDKKIKGSRGTYE  215 (348)
T ss_dssp             HHHHHHHTSCEECCCCCGGGEEECT---------------------------TSCEEECCCTTCEECBTTEECSSCSCGG
T ss_pred             HHHHHhccCCEeecCCChHhEEEcC---------------------------CCcEEEeccccccccccccccCCCCCcC
Confidence            6899999 99999999999999944                           445777777777643222 223468899


Q ss_pred             cccchhhhcC-CCCc-cchhHhHHHHHHHHHhCCCCCCCCCh-HHHHHHHHHHhCCCchHHHHHhhHHHHHHhhcCCCCC
Q 025467           79 YRAPEVILGL-GWTY-PCDIWSVGCILVELCTGEALFQTHEN-LEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDW  155 (252)
Q Consensus        79 y~aPE~l~~~-~~~~-~~Diws~G~~l~~l~~g~~pf~~~~~-~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~  155 (252)
                      |+|||++.+. .++. ++||||+||++|++++|..||.+... .+....+..                       +...+
T Consensus       216 y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~i~~-----------------------~~~~~  272 (348)
T 2pml_X          216 FMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLKISLVELFNNIRT-----------------------KNIEY  272 (348)
T ss_dssp             GCCGGGGSSCCCEEHHHHHHHHHHHHHHHHHHSSCSSCCSSCSHHHHHHHTS-----------------------CCCCC
T ss_pred             ccCchhhcCCCCCCcchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhc-----------------------cCcCC
Confidence            9999999887 5665 99999999999999999999987655 333322211                       11111


Q ss_pred             CccccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCCCCC
Q 025467          156 PEGAASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLT  235 (252)
Q Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~t  235 (252)
                      +......  .      ...                            ............+.++.+||.+||+.||.+|||
T Consensus       273 ~~~~~~~--~------~~~----------------------------~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rps  316 (348)
T 2pml_X          273 PLDRNHF--L------YPL----------------------------TNKKSTCSNNFLSNEDIDFLKLFLRKNPAERIT  316 (348)
T ss_dssp             CCSSSSS--T------TTT----------------------------CC--------CCCHHHHHHHHHHCCSSGGGSCC
T ss_pred             ccchhhh--h------ccc----------------------------cccccccchhhcCHHHHHHHHHHccCChhhCCC
Confidence            1100000  0      000                            000000112345678999999999999999999


Q ss_pred             HHHHHcCCCCCCcc
Q 025467          236 AREALRHPFFTRDH  249 (252)
Q Consensus       236 a~e~l~hpwf~~~~  249 (252)
                      ++|+++||||++..
T Consensus       317 ~~e~l~hp~f~~~~  330 (348)
T 2pml_X          317 SEDALKHEWLADTN  330 (348)
T ss_dssp             HHHHHTSGGGTTCC
T ss_pred             HHHHhcCccccCCC
Confidence            99999999999764

>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*

Probab=99.95  E-value=3.4e-29  Score=203.51  Aligned_cols=149  Identities=34%  Similarity=0.590  Sum_probs=112.2

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCC--CccccCCC
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ--NYIVSTRH   78 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~--~~~~~t~~   78 (252)
                      ||+|||++||+||||||+||+++..+                        ....++|+|||.+.......  ....+++.
T Consensus       133 ~l~~LH~~~i~H~dl~p~NIlv~~~~------------------------~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~  188 (287)
T 2wei_A          133 GITYMHKHNIVHRDLKPENILLESKE------------------------KDCDIKIIDFGLSTCFQQNTKMKDRIGTAY  188 (287)
T ss_dssp             HHHHHHHTTCCCSCCCGGGEEESCSS------------------------TTCCEEECSTTGGGTBCCCSSCSCHHHHHT
T ss_pred             HHHHHHHCCeeccCCChhhEEEecCC------------------------CcccEEEeccCcceeecCCCccccccCccc
Confidence            68999999999999999999995432                        23457888998876543332  22357889


Q ss_pred             cccchhhhcCCCCccchhHhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHHHHHHhhcCCCCCCcc
Q 025467           79 YRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEG  158 (252)
Q Consensus        79 y~aPE~l~~~~~~~~~Diws~G~~l~~l~~g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~  158 (252)
                      |+|||.+.+ .++.++||||+||++|++++|..||.+.+..+....+..                       +....+. 
T Consensus       189 y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~-----------------------~~~~~~~-  243 (287)
T 2wei_A          189 YIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVET-----------------------GKYAFDL-  243 (287)
T ss_dssp             TCCHHHHTT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHH-----------------------CCCCCCS-
T ss_pred             ccChHHhcC-CCCCchhhHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHc-----------------------CCCCCCc-
Confidence            999999875 488999999999999999999999987665444333222                       1110000 


Q ss_pred             ccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCCCCCHHH
Q 025467          159 AASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTARE  238 (252)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~ta~e  238 (252)
                                                                        ..+...+.++.+||.+||..||++|||++|
T Consensus       244 --------------------------------------------------~~~~~~~~~~~~li~~~l~~dp~~Rps~~e  273 (287)
T 2wei_A          244 --------------------------------------------------PQWRTISDDAKDLIRKMLTFHPSLRITATQ  273 (287)
T ss_dssp             --------------------------------------------------GGGTTSCHHHHHHHHHHTCSSGGGSCCHHH
T ss_pred             --------------------------------------------------hhhhhcCHHHHHHHHHHcccChhhCcCHHH
Confidence                                                              001234568999999999999999999999


Q ss_pred             HHcCCCCCCc
Q 025467          239 ALRHPFFTRD  248 (252)
Q Consensus       239 ~l~hpwf~~~  248 (252)
                      +|+||||+..
T Consensus       274 ll~hp~~~~~  283 (287)
T 2wei_A          274 CLEHPWIQKY  283 (287)
T ss_dssp             HHHSHHHHHH
T ss_pred             HhcCHHHhcc
Confidence            9999999754

>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}

Probab=99.95  E-value=4.7e-29  Score=205.89  Aligned_cols=145  Identities=21%  Similarity=0.250  Sum_probs=100.3

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCC-----Ccccc
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ-----NYIVS   75 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~-----~~~~~   75 (252)
                      ||+|||++||+||||||+|||++.                           .+.++|+|||.+.......     ....+
T Consensus       149 al~~LH~~~ivH~Dikp~NIli~~---------------------------~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~  201 (323)
T 3qup_A          149 GMEYLSSRNFIHRDLAARNCMLAE---------------------------DMTVCVADFGLSRKIYSGDYYRQGCASKL  201 (323)
T ss_dssp             HHHHHHHTTCCCSCCSGGGEEECT---------------------------TSCEEECCCCC-----------------C
T ss_pred             HHHHHHcCCcccCCCCcceEEEcC---------------------------CCCEEEeeccccccccccccccccccccC
Confidence            689999999999999999999954                           3456777777665432221     12345


Q ss_pred             CCCcccchhhhcCCCCccchhHhHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHHHHHHhhcCCCC
Q 025467           76 TRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLD  154 (252)
Q Consensus        76 t~~y~aPE~l~~~~~~~~~Diws~G~~l~~l~~-g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~  154 (252)
                      ++.|+|||.+.+..++.++||||+||++|++++ |..||.+.+..+....+...                      ....
T Consensus       202 ~~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~~~~~~~~----------------------~~~~  259 (323)
T 3qup_A          202 PVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIENAEIYNYLIGG----------------------NRLK  259 (323)
T ss_dssp             CGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHHTT----------------------CCCC
T ss_pred             cccccCchhhcCCCCCCccchhhHHHHHHHHHhCCCCCccccChHHHHHHHhcC----------------------CCCC
Confidence            678999999999899999999999999999999 99999876654443322110                      0000


Q ss_pred             CCccccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCCCC
Q 025467          155 WPEGAASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRL  234 (252)
Q Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~  234 (252)
                      .                                                       ....++++.+|+.+||+.||++||
T Consensus       260 ~-------------------------------------------------------~~~~~~~l~~li~~~l~~dp~~Rp  284 (323)
T 3qup_A          260 Q-------------------------------------------------------PPECMEEVYDLMYQCWSADPKQRP  284 (323)
T ss_dssp             C-------------------------------------------------------CTTCCHHHHHHHHHTTCSSGGGSC
T ss_pred             C-------------------------------------------------------CCccCHHHHHHHHHHccCChhhCc
Confidence            0                                                       123456899999999999999999


Q ss_pred             C-------HHHHHcCCCCCCcc
Q 025467          235 T-------AREALRHPFFTRDH  249 (252)
Q Consensus       235 t-------a~e~l~hpwf~~~~  249 (252)
                      |       .+++++|||+....
T Consensus       285 s~~~l~~~l~~~l~~~~~~~~~  306 (323)
T 3qup_A          285 SFTCLRMELENILGHLSVLSTS  306 (323)
T ss_dssp             CHHHHHHHHHHHHHC-------
T ss_pred             CHHHHHHHHHHHHHHhhhcCCC
Confidence            9       88889999998754

>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A

Probab=99.95  E-value=3.5e-29  Score=204.33  Aligned_cols=162  Identities=23%  Similarity=0.346  Sum_probs=98.2

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCCCccccCCCcc
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYR   80 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~~~~~~t~~y~   80 (252)
                      ||+|||++||+||||||+||+++.++.+++.|||++............          +...............||+.|+
T Consensus       128 ~l~~LH~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~y~  197 (303)
T 1zy4_A          128 ALSYIHSQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKL----------DSQNLPGSSDNLTSAIGTAMYV  197 (303)
T ss_dssp             HHHHHHHTTCCCSCCCGGGEEECTTSCEEECCCCCCSCTTC-----------------------------------CTTS
T ss_pred             HHHHHHhCCeecccCCHHhEEEcCCCCEEEeeCcchhhcccccchhcc----------ccccccccccccccCCCccccc
Confidence            689999999999999999999976665555555554332211100000          0000000001112246889999


Q ss_pred             cchhhhcC-CCCccchhHhHHHHHHHHHhCCCCCCCCChH-HHHHHHHHHhCCCchHHHHHhhHHHHHHhhcCCCCCCcc
Q 025467           81 APEVILGL-GWTYPCDIWSVGCILVELCTGEALFQTHENL-EHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEG  158 (252)
Q Consensus        81 aPE~l~~~-~~~~~~Diws~G~~l~~l~~g~~pf~~~~~~-~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~  158 (252)
                      |||++.+. .++.++||||+||++|+|++   ||....+. .....+.                       ......+. 
T Consensus       198 aPE~~~~~~~~~~~~Di~slG~il~~l~~---p~~~~~~~~~~~~~~~-----------------------~~~~~~~~-  250 (303)
T 1zy4_A          198 ATEVLDGTGHYNEKIDMYSLGIIFFEMIY---PFSTGMERVNILKKLR-----------------------SVSIEFPP-  250 (303)
T ss_dssp             CHHHHTSCSCCCTHHHHHHHHHHHHHHHS---CCSSHHHHHHHHHHHH-----------------------STTCCCCT-
T ss_pred             CcccccCCCCCcchhhHHHHHHHHHHHHh---ccCCchhHHHHHHhcc-----------------------ccccccCc-
Confidence            99999865 68899999999999999997   55322111 1111110                       11111110 


Q ss_pred             ccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCCCCCHHH
Q 025467          159 AASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTARE  238 (252)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~ta~e  238 (252)
                                                                        ......+..+.+||.+||+.||.+|||+++
T Consensus       251 --------------------------------------------------~~~~~~~~~~~~li~~~l~~dp~~Rps~~~  280 (303)
T 1zy4_A          251 --------------------------------------------------DFDDNKMKVEKKIIRLLIDHDPNKRPGART  280 (303)
T ss_dssp             --------------------------------------------------TCCTTTSHHHHHHHHHHTCSSGGGSCCHHH
T ss_pred             --------------------------------------------------cccccchHHHHHHHHHHHhcCcccCcCHHH
Confidence                                                              001233457899999999999999999999


Q ss_pred             HHcCCCCCCcc
Q 025467          239 ALRHPFFTRDH  249 (252)
Q Consensus       239 ~l~hpwf~~~~  249 (252)
                      +++||||+...
T Consensus       281 ll~h~~~~~~~  291 (303)
T 1zy4_A          281 LLNSGWLPVKH  291 (303)
T ss_dssp             HHHSSCSCCCC
T ss_pred             HhCCCCcCCCC
Confidence            99999998754

>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*

Probab=99.95  E-value=5.1e-29  Score=204.86  Aligned_cols=146  Identities=32%  Similarity=0.572  Sum_probs=102.7

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCC-----Ccccc
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ-----NYIVS   75 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~-----~~~~~   75 (252)
                      ||+|||++||+||||||+||+++.                            +.++|+|||.+.......     ....|
T Consensus       139 aL~~LH~~~ivH~dlkp~NIl~~~----------------------------~~~kL~Dfg~~~~~~~~~~~~~~~~~~g  190 (313)
T 3cek_A          139 AVHTIHQHGIVHSDLKPANFLIVD----------------------------GMLKLIDFGIANQMQPDTTSVVKDSQVG  190 (313)
T ss_dssp             HHHHHHHTTCCCCCCCGGGEEEET----------------------------TEEEECCCSSSCC--------------C
T ss_pred             HHHHHHHCCceecCCCcccEEEEC----------------------------CeEEEeeccccccccCccccccccCCCC
Confidence            689999999999999999999942                            346777777765432221     12368


Q ss_pred             CCCcccchhhhc-----------CCCCccchhHhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHHH
Q 025467           76 TRHYRAPEVILG-----------LGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHA  144 (252)
Q Consensus        76 t~~y~aPE~l~~-----------~~~~~~~Diws~G~~l~~l~~g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~  144 (252)
                      ++.|+|||++.+           ..++.++||||+||++|+|++|..||........  .+.....+             
T Consensus       191 t~~y~aPE~~~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~--~~~~~~~~-------------  255 (313)
T 3cek_A          191 TVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQIS--KLHAIIDP-------------  255 (313)
T ss_dssp             CGGGCCHHHHTTCC----------CCCHHHHHHHHHHHHHHHHHSSCTTTTCCSHHH--HHHHHHCT-------------
T ss_pred             CCCcCCHHHHhhcccccccccccccCCchHHHHHHHHHHHHHHhCCCchhhHHHHHH--HHHHHHhc-------------
Confidence            999999999875           3678899999999999999999999976433211  11111100             


Q ss_pred             HHHhhcCCCCCCccccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHH
Q 025467          145 EKYVRRGRLDWPEGAASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQG  224 (252)
Q Consensus       145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~  224 (252)
                           ......                                                       ....+.++.+||.+
T Consensus       256 -----~~~~~~-------------------------------------------------------~~~~~~~l~~li~~  275 (313)
T 3cek_A          256 -----NHEIEF-------------------------------------------------------PDIPEKDLQDVLKC  275 (313)
T ss_dssp             -----TSCCCC-------------------------------------------------------CCCSCHHHHHHHHH
T ss_pred             -----ccccCC-------------------------------------------------------cccchHHHHHHHHH
Confidence                 000000                                                       11234588999999


Q ss_pred             hccCCCCCCCCHHHHHcCCCCCCcc
Q 025467          225 LLRYDPTDRLTAREALRHPFFTRDH  249 (252)
Q Consensus       225 ~L~~dP~~R~ta~e~l~hpwf~~~~  249 (252)
                      ||+.||.+|||++|+++||||+...
T Consensus       276 ~l~~dp~~Rps~~ell~h~~~~~~~  300 (313)
T 3cek_A          276 CLKRDPKQRISIPELLAHPYVQIQT  300 (313)
T ss_dssp             HTCSSTTTSCCHHHHHTSHHHHCC-
T ss_pred             HccCCcccCcCHHHHhcCccccCCC
Confidence            9999999999999999999998754

>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*

Probab=99.95  E-value=5.8e-29  Score=201.12  Aligned_cols=145  Identities=27%  Similarity=0.467  Sum_probs=109.1

Q ss_pred             ChhhhhccC-----ccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCCC---c
Q 025467            1 MFAVMHDLC-----MIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQN---Y   72 (252)
Q Consensus         1 aL~~lH~~~-----ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~~---~   72 (252)
                      ||+|||+.|     |+||||||+||+++.                           .+.++|+|||.+........   .
T Consensus       123 ~l~~lH~~~~~~~~ivH~dl~p~NIl~~~---------------------------~~~~kl~dfg~~~~~~~~~~~~~~  175 (279)
T 2w5a_A          123 ALKECHRRSDGGHTVLHRDLKPANVFLDG---------------------------KQNVKLGDFGLARILNHDTSFAKT  175 (279)
T ss_dssp             HHHHHHHHC------CCCCCSGGGEEECS---------------------------SSCEEECCCCHHHHC---CHHHHH
T ss_pred             HHHHHhcccCCCCeeEEeccchhhEEEcC---------------------------CCCEEEecCchheeeccccccccc
Confidence            689999999     999999999999943                           44577888887765433221   2


Q ss_pred             cccCCCcccchhhhcCCCCccchhHhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHHHHHHhhcCC
Q 025467           73 IVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGR  152 (252)
Q Consensus        73 ~~~t~~y~aPE~l~~~~~~~~~Diws~G~~l~~l~~g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~  152 (252)
                      ..|+..|+|||++.+..++.++||||+||++|++++|..||...+.......+..  +..                    
T Consensus       176 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~i~~--~~~--------------------  233 (279)
T 2w5a_A          176 FVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIRE--GKF--------------------  233 (279)
T ss_dssp             HHSCCTTCCHHHHHCC-CCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHH--TCC--------------------
T ss_pred             cCCCccccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCcccCHHHHHHHHhh--ccc--------------------
Confidence            3678999999999988899999999999999999999999987654433332211  000                    


Q ss_pred             CCCCccccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCC
Q 025467          153 LDWPEGAASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTD  232 (252)
Q Consensus       153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~  232 (252)
                      ...                                                       ....+.++.+|+.+||+.||.+
T Consensus       234 ~~~-------------------------------------------------------~~~~~~~l~~li~~~l~~~p~~  258 (279)
T 2w5a_A          234 RRI-------------------------------------------------------PYRYSDELNEIITRMLNLKDYH  258 (279)
T ss_dssp             CCC-------------------------------------------------------CTTSCHHHHHHHHHHTCSSGGG
T ss_pred             ccC-------------------------------------------------------CcccCHHHHHHHHHHcCCCccc
Confidence            000                                                       0123468899999999999999


Q ss_pred             CCCHHHHHcCCCCCCcc
Q 025467          233 RLTAREALRHPFFTRDH  249 (252)
Q Consensus       233 R~ta~e~l~hpwf~~~~  249 (252)
                      |||++|+++|+|+....
T Consensus       259 Rps~~~ll~~~~~~~~~  275 (279)
T 2w5a_A          259 RPSVEEILENPLILEHH  275 (279)
T ss_dssp             SCCHHHHHTSTTCCGGG
T ss_pred             CCCHHHHHhChhhhhhc
Confidence            99999999999998754

>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}

Probab=99.95  E-value=6.1e-30  Score=210.94  Aligned_cols=94  Identities=24%  Similarity=0.440  Sum_probs=75.8

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCC--CccccCCC
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ--NYIVSTRH   78 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~--~~~~~t~~   78 (252)
                      ||+|||++||+||||||+|||+....                       +....++|+|||.+.......  ....||+.
T Consensus       124 ~L~~LH~~~ivH~Dlkp~NIll~~~~-----------------------~~~~~~kL~Dfg~a~~~~~~~~~~~~~gt~~  180 (319)
T 4euu_A          124 GMNHLRENGIVHRNIKPGNIMRVIGE-----------------------DGQSVYKLTDFGAARELEDDEQFVSLYGTEE  180 (319)
T ss_dssp             HHHHHHHTTEECSCCSGGGEEEEECT-----------------------TSCEEEEECCCTTCEECCTTCCBCCCCSCGG
T ss_pred             HHHHHHHCCEecCCCCHHHEEEeccC-----------------------CCCceEEEccCCCceecCCCCceeecccCCC
Confidence            68999999999999999999984322                       234467889999887544332  23468999


Q ss_pred             cccchhhh--------cCCCCccchhHhHHHHHHHHHhCCCCCCCCC
Q 025467           79 YRAPEVIL--------GLGWTYPCDIWSVGCILVELCTGEALFQTHE  117 (252)
Q Consensus        79 y~aPE~l~--------~~~~~~~~Diws~G~~l~~l~~g~~pf~~~~  117 (252)
                      |+|||++.        +..++.++||||+||++|+|++|..||....
T Consensus       181 y~aPE~~~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~  227 (319)
T 4euu_A          181 YLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFE  227 (319)
T ss_dssp             GCCHHHHHHHTSCCCCCCCBCTTHHHHHHHHHHHHHHHSSCSEECTT
T ss_pred             ccCHHHhhhccccccccCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC
Confidence            99999987        4678899999999999999999999997543

>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}

Probab=99.95  E-value=6.6e-29  Score=204.33  Aligned_cols=146  Identities=28%  Similarity=0.391  Sum_probs=100.7

Q ss_pred             Chhhhhcc-CccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCC--CCccccCC
Q 025467            1 MFAVMHDL-CMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD--QNYIVSTR   77 (252)
Q Consensus         1 aL~~lH~~-~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~--~~~~~~t~   77 (252)
                      ||+|||++ ||+||||||+||+++.                           .+.++|+|||.+......  .....+++
T Consensus       136 ~l~~lH~~~~i~H~dlkp~Nil~~~---------------------------~~~~kl~dfg~~~~~~~~~~~~~~~~~~  188 (318)
T 2dyl_A          136 ALYYLKEKHGVIHRDVKPSNILLDE---------------------------RGQIKLCDFGISGRLVDDKAKDRSAGCA  188 (318)
T ss_dssp             HHHHHHHHHCCCCCCCCGGGEEECT---------------------------TSCEEECCCTTC--------------CC
T ss_pred             HHHHHHhhCCEEeCCCCHHHEEECC---------------------------CCCEEEEECCCchhccCCccccccCCCc
Confidence            68999995 9999999999999954                           445677777766543222  12246889


Q ss_pred             Ccccchhhh-----cCCCCccchhHhHHHHHHHHHhCCCCCCCCChH-HHHHHHHHHhCCCchHHHHHhhHHHHHHhhcC
Q 025467           78 HYRAPEVIL-----GLGWTYPCDIWSVGCILVELCTGEALFQTHENL-EHLAMMERVLGPLPQHMLKRVDRHAEKYVRRG  151 (252)
Q Consensus        78 ~y~aPE~l~-----~~~~~~~~Diws~G~~l~~l~~g~~pf~~~~~~-~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~  151 (252)
                      .|+|||++.     ...++.++||||+||++|+|++|..||...... ..+..+..  +..                   
T Consensus       189 ~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~--~~~-------------------  247 (318)
T 2dyl_A          189 AYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKTDFEVLTKVLQ--EEP-------------------  247 (318)
T ss_dssp             TTCCHHHHC--------CCTHHHHHHHHHHHHHHHHSSCTTTTCCSHHHHHHHHHH--SCC-------------------
T ss_pred             cccChhhcccccccccCCccccchhhHHHHHHHHHhCCCCCCCCCccHHHHHHHhc--cCC-------------------
Confidence            999999995     446788999999999999999999999764332 22222211  000                   


Q ss_pred             CCCCCccccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCC
Q 025467          152 RLDWPEGAASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPT  231 (252)
Q Consensus       152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~  231 (252)
                       ...+                                                     .....+.++.+||.+||+.||.
T Consensus       248 -~~~~-----------------------------------------------------~~~~~~~~l~~li~~~l~~dp~  273 (318)
T 2dyl_A          248 -PLLP-----------------------------------------------------GHMGFSGDFQSFVKDCLTKDHR  273 (318)
T ss_dssp             -CCCC-----------------------------------------------------SSSCCCHHHHHHHHHHTCSCTT
T ss_pred             -CCCC-----------------------------------------------------ccCCCCHHHHHHHHHHccCChh
Confidence             0000                                                     0122456899999999999999


Q ss_pred             CCCCHHHHHcCCCCCCc
Q 025467          232 DRLTAREALRHPFFTRD  248 (252)
Q Consensus       232 ~R~ta~e~l~hpwf~~~  248 (252)
                      +|||++++++||||+..
T Consensus       274 ~Rps~~~ll~h~~~~~~  290 (318)
T 2dyl_A          274 KRPKYNKLLEHSFIKRY  290 (318)
T ss_dssp             TSCCHHHHTTSHHHHHH
T ss_pred             HCcCHHHHhhCHHHHhc
Confidence            99999999999999753

>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}

Probab=99.95  E-value=9e-29  Score=203.24  Aligned_cols=139  Identities=26%  Similarity=0.471  Sum_probs=104.7

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCC-CccccCCCc
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ-NYIVSTRHY   79 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~-~~~~~t~~y   79 (252)
                      ||+|||++||+||||||+||+++.                          ..+.++|+|||.+....... ....|+..|
T Consensus       151 ~l~~lH~~~i~H~dlkp~Nil~~~--------------------------~~~~~kl~dfg~~~~~~~~~~~~~~~~~~y  204 (312)
T 2iwi_A          151 AIQHCHSRGVVHRDIKDENILIDL--------------------------RRGCAKLIDFGSGALLHDEPYTDFDGTRVY  204 (312)
T ss_dssp             HHHHHHHHTEECCCCSGGGEEEET--------------------------TTTEEEECCCSSCEECCSSCBCCCCSCTTT
T ss_pred             HHHHHHHCCeeecCCChhhEEEeC--------------------------CCCeEEEEEcchhhhcccCcccccCCcccc
Confidence            689999999999999999999952                          23456777777765443322 234688999


Q ss_pred             ccchhhhcCCC-CccchhHhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHHHHHHhhcCCCCCCcc
Q 025467           80 RAPEVILGLGW-TYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEG  158 (252)
Q Consensus        80 ~aPE~l~~~~~-~~~~Diws~G~~l~~l~~g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~  158 (252)
                      +|||++.+..+ +.++||||+||++|++++|..||.....      +..                       .....   
T Consensus       205 ~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~------~~~-----------------------~~~~~---  252 (312)
T 2iwi_A          205 SPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFERDQE------ILE-----------------------AELHF---  252 (312)
T ss_dssp             SCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHHH------HHH-----------------------TCCCC---
T ss_pred             cCceeeecCCCCCccchHHHHHHHHHHHHHCCCCCCChHH------Hhh-----------------------hccCC---
Confidence            99999987766 4589999999999999999999964210      000                       00100   


Q ss_pred             ccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCCCCCHHH
Q 025467          159 AASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTARE  238 (252)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~ta~e  238 (252)
                                                                          ....+..+.+||.+||+.||++|||++|
T Consensus       253 ----------------------------------------------------~~~~~~~~~~li~~~l~~~p~~Rps~~e  280 (312)
T 2iwi_A          253 ----------------------------------------------------PAHVSPDCCALIRRCLAPKPSSRPSLEE  280 (312)
T ss_dssp             ----------------------------------------------------CTTSCHHHHHHHHHHTCSSTTTSCCHHH
T ss_pred             ----------------------------------------------------cccCCHHHHHHHHHHccCChhhCcCHHH
Confidence                                                                1223468899999999999999999999


Q ss_pred             HHcCCCCCCcc
Q 025467          239 ALRHPFFTRDH  249 (252)
Q Consensus       239 ~l~hpwf~~~~  249 (252)
                      +++||||+...
T Consensus       281 ~l~~~~~~~~~  291 (312)
T 2iwi_A          281 ILLDPWMQTPA  291 (312)
T ss_dssp             HHHSTTTCC--
T ss_pred             HhcChhhcCch
Confidence            99999998753

>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*

Probab=99.95  E-value=1.5e-28  Score=203.17  Aligned_cols=93  Identities=30%  Similarity=0.392  Sum_probs=73.9

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCC-----Ccccc
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ-----NYIVS   75 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~-----~~~~~   75 (252)
                      ||+|||++||+||||||+|||++.                           .+.++|+|||.+.......     ....+
T Consensus       127 ~l~~lH~~~ivH~Dikp~Nil~~~---------------------------~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~  179 (325)
T 3kex_A          127 GMYYLEEHGMVHRNLAARNVLLKS---------------------------PSQVQVADFGVADLLPPDDKQLLYSEAKT  179 (325)
T ss_dssp             HHHHHHHTTCCCSCCSSTTEEESS---------------------------SSCEEECSCSGGGGSCCCTTCCC-----C
T ss_pred             HHHHHHhCCCCCCccchheEEECC---------------------------CCeEEECCCCcccccCcccccccccCCCC
Confidence            689999999999999999999954                           3456777777766433221     22356


Q ss_pred             CCCcccchhhhcCCCCccchhHhHHHHHHHHHh-CCCCCCCCChHH
Q 025467           76 TRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHENLE  120 (252)
Q Consensus        76 t~~y~aPE~l~~~~~~~~~Diws~G~~l~~l~~-g~~pf~~~~~~~  120 (252)
                      |..|+|||++.+..++.++||||+||++|++++ |..||.+.....
T Consensus       180 ~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~  225 (325)
T 3kex_A          180 PIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLAE  225 (325)
T ss_dssp             CTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCTTH
T ss_pred             cccccChHHhccCCCChhhHhHHhHHHHHHHHhCCCCCccccCHHH
Confidence            778999999998899999999999999999999 999998765433

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*

Probab=99.95  E-value=2.4e-28  Score=200.70  Aligned_cols=138  Identities=22%  Similarity=0.303  Sum_probs=99.5

Q ss_pred             ChhhhhccC--ccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCC---CCcccc
Q 025467            1 MFAVMHDLC--MIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD---QNYIVS   75 (252)
Q Consensus         1 aL~~lH~~~--ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~---~~~~~~   75 (252)
                      ||+|||++|  |+||||||+|||++.                           .+.++|+|||.+......   .....|
T Consensus       149 aL~~LH~~~~~ivH~Dikp~NIll~~---------------------------~~~~kL~Dfg~a~~~~~~~~~~~~~~g  201 (309)
T 3p86_A          149 GMNYLHNRNPPIVHRNLKSPNLLVDK---------------------------KYTVKVCDFGLSRLKASTFLSSKSAAG  201 (309)
T ss_dssp             HHHHHHTSSSCCCCTTCCGGGEEECT---------------------------TCCEEECCCC-----------------
T ss_pred             HHHHHHcCCCCEECCCCChhhEEEeC---------------------------CCcEEECCCCCCccccccccccccCCC
Confidence            689999999  999999999999944                           445677777776543222   123478


Q ss_pred             CCCcccchhhhcCCCCccchhHhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHHHHHHhhcCCCCC
Q 025467           76 TRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDW  155 (252)
Q Consensus        76 t~~y~aPE~l~~~~~~~~~Diws~G~~l~~l~~g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~  155 (252)
                      |+.|+|||++.+..++.++||||+||++|++++|..||.+.+.......+.....                     ....
T Consensus       202 t~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~Pf~~~~~~~~~~~~~~~~~---------------------~~~~  260 (309)
T 3p86_A          202 TPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNPAQVVAAVGFKCK---------------------RLEI  260 (309)
T ss_dssp             CCTTSCHHHHTTCCCCTTHHHHHHHHHHHHHHHCCCTTTTSCHHHHHHHHHHSCC---------------------CCCC
T ss_pred             CccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCC---------------------CCCC
Confidence            9999999999998899999999999999999999999987665444332211110                     0100


Q ss_pred             CccccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCCCCC
Q 025467          156 PEGAASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLT  235 (252)
Q Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~t  235 (252)
                                                                             ....++++.+||.+||+.||.+|||
T Consensus       261 -------------------------------------------------------~~~~~~~l~~li~~~l~~dP~~Rps  285 (309)
T 3p86_A          261 -------------------------------------------------------PRNLNPQVAAIIEGCWTNEPWKRPS  285 (309)
T ss_dssp             -------------------------------------------------------CTTSCHHHHHHHHHHTCSSGGGSCC
T ss_pred             -------------------------------------------------------CccCCHHHHHHHHHHccCChhhCcC
Confidence                                                                   1234568999999999999999999


Q ss_pred             HHHHHc
Q 025467          236 AREALR  241 (252)
Q Consensus       236 a~e~l~  241 (252)
                      ++++++
T Consensus       286 ~~~ll~  291 (309)
T 3p86_A          286 FATIMD  291 (309)
T ss_dssp             HHHHHH
T ss_pred             HHHHHH
Confidence            999987

>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*

Probab=99.95  E-value=4.3e-28  Score=197.71  Aligned_cols=95  Identities=21%  Similarity=0.363  Sum_probs=76.8

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCC----------C
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD----------Q   70 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~----------~   70 (252)
                      ||+|||++||+||||||+||+++.++.                      .....++|+|||.+......          .
T Consensus       118 ~l~~lH~~~ivH~Dlkp~NIl~~~~~~----------------------~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~  175 (298)
T 1csn_A          118 RVQSIHEKSLVYRDIKPDNFLIGRPNS----------------------KNANMIYVVDFGMVKFYRDPVTKQHIPYREK  175 (298)
T ss_dssp             HHHHHHTTTEECCCCCGGGEEECCSSS----------------------TTTTCEEECCCTTCEESBCTTTCCBCCCCCC
T ss_pred             HHHHHHhCCEecCCCCHHHEEeccCCC----------------------CCCCeEEEEECccccccccccccccccccCc
Confidence            689999999999999999999965432                      12334788888877543221          1


Q ss_pred             CccccCCCcccchhhhcCCCCccchhHhHHHHHHHHHhCCCCCCCCC
Q 025467           71 NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHE  117 (252)
Q Consensus        71 ~~~~~t~~y~aPE~l~~~~~~~~~Diws~G~~l~~l~~g~~pf~~~~  117 (252)
                      ....||+.|+|||++.+..++.++||||+||++|+|++|..||.+..
T Consensus       176 ~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~  222 (298)
T 1csn_A          176 KNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLK  222 (298)
T ss_dssp             CCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCC
T ss_pred             cCCCCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHcCCCCcchhh
Confidence            23468999999999998889999999999999999999999998743

>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A

Probab=99.95  E-value=2e-28  Score=206.06  Aligned_cols=92  Identities=24%  Similarity=0.347  Sum_probs=74.4

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCC-----Ccccc
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ-----NYIVS   75 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~-----~~~~~   75 (252)
                      ||+|||++||+||||||+|||++.                           .+.+||+|||++.......     ....+
T Consensus       215 aL~~LH~~~ivHrDlkp~NIll~~---------------------------~~~~kl~DFG~a~~~~~~~~~~~~~~~~~  267 (370)
T 2psq_A          215 GMEYLASQKCIHRDLAARNVLVTE---------------------------NNVMKIADFGLARDINNIDYYKKTTNGRL  267 (370)
T ss_dssp             HHHHHHHTTEECSCCCGGGEEECT---------------------------TCCEEECCCSSCEETTCCCTTCTTTTTTS
T ss_pred             HHHHHHhCCeeccccchhhEEECC---------------------------CCCEEEccccCCcccCcccceecccCCCc
Confidence            689999999999999999999954                           4456777777765432211     22356


Q ss_pred             CCCcccchhhhcCCCCccchhHhHHHHHHHHHh-CCCCCCCCChH
Q 025467           76 TRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHENL  119 (252)
Q Consensus        76 t~~y~aPE~l~~~~~~~~~Diws~G~~l~~l~~-g~~pf~~~~~~  119 (252)
                      |+.|+|||++.+..++.++||||+||++|+|++ |..||.+....
T Consensus       268 t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~p~~~~~~~  312 (370)
T 2psq_A          268 PVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVE  312 (370)
T ss_dssp             CGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGG
T ss_pred             ccceECHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCCCCCCHH
Confidence            778999999999899999999999999999999 99999865543

>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*

Probab=99.95  E-value=1.4e-28  Score=205.84  Aligned_cols=139  Identities=22%  Similarity=0.304  Sum_probs=102.8

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCC-----Ccccc
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ-----NYIVS   75 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~-----~~~~~   75 (252)
                      ||+|||++||+||||||+|||++.++.                           ++|+|||.+.......     ....|
T Consensus       205 aL~~LH~~~ivH~Dikp~NIll~~~~~---------------------------~kl~Dfg~a~~~~~~~~~~~~~~~~~  257 (359)
T 3vhe_A          205 GMEFLASRKCIHRDLAARNILLSEKNV---------------------------VKICDFGLARDIYKDPDYVRKGDARL  257 (359)
T ss_dssp             HHHHHHHTTCCCSCCSGGGEEECGGGC---------------------------EEECCCGGGSCTTSCTTCEEC--CEE
T ss_pred             HHHHHHHCCcccCCCChhhEEEcCCCc---------------------------EEEEeccceeeecccccchhccccCC
Confidence            689999999999999999999965544                           5555665554322211     12357


Q ss_pred             CCCcccchhhhcCCCCccchhHhHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHHHHHHhhcCCCC
Q 025467           76 TRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLD  154 (252)
Q Consensus        76 t~~y~aPE~l~~~~~~~~~Diws~G~~l~~l~~-g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~  154 (252)
                      |+.|+|||++.+..++.++||||+||++|+|++ |..||.+......+.........                     ..
T Consensus       258 t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~~~~---------------------~~  316 (359)
T 3vhe_A          258 PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTR---------------------MR  316 (359)
T ss_dssp             CGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHHHHHHHHHTCC---------------------CC
T ss_pred             CceeEChhhhcCCCCCchhhhhhHHHHHHHHHhcCCCCCCccchhHHHHHHHHcCCC---------------------CC
Confidence            888999999999899999999999999999998 99999876543333222211110                     00


Q ss_pred             CCccccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCCCC
Q 025467          155 WPEGAASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRL  234 (252)
Q Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~  234 (252)
                      .                                                       ....++++.+|+.+||+.||++||
T Consensus       317 ~-------------------------------------------------------~~~~~~~l~~li~~~l~~dP~~Rp  341 (359)
T 3vhe_A          317 A-------------------------------------------------------PDYTTPEMYQTMLDCWHGEPSQRP  341 (359)
T ss_dssp             C-------------------------------------------------------CTTCCHHHHHHHHHHTCSSGGGSC
T ss_pred             C-------------------------------------------------------CCCCCHHHHHHHHHHccCChhhCC
Confidence            0                                                       122346899999999999999999


Q ss_pred             CHHHHHcC
Q 025467          235 TAREALRH  242 (252)
Q Consensus       235 ta~e~l~h  242 (252)
                      |++|+++|
T Consensus       342 s~~ell~~  349 (359)
T 3vhe_A          342 TFSELVEH  349 (359)
T ss_dssp             CHHHHHHH
T ss_pred             CHHHHHHH
Confidence            99999976

>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}

Probab=99.95  E-value=4.5e-28  Score=201.95  Aligned_cols=90  Identities=17%  Similarity=0.298  Sum_probs=73.4

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCC----------C
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD----------Q   70 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~----------~   70 (252)
                      ||+|||++||+||||||+|||++.++                         ...++|+|||.++.....          .
T Consensus       163 aL~~LH~~~ivH~Dlkp~NIll~~~~-------------------------~~~~kL~Dfg~a~~~~~~~~~~~~~~~~~  217 (345)
T 2v62_A          163 VLEYIHENEYVHGDIKAANLLLGYKN-------------------------PDQVYLADYGLSYRYCPNGNHKQYQENPR  217 (345)
T ss_dssp             HHHHHHHTTEECSCCSGGGEEEESSS-------------------------TTSEEECCCTTCEESSGGGCCCCCCCCGG
T ss_pred             HHHHHHhCCeeCCCcCHHHEEEccCC-------------------------CCcEEEEeCCCceecccccccccchhccc
Confidence            68999999999999999999996543                         125677777776533211          1


Q ss_pred             CccccCCCcccchhhhcCCCCccchhHhHHHHHHHHHhCCCCCCC
Q 025467           71 NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQT  115 (252)
Q Consensus        71 ~~~~~t~~y~aPE~l~~~~~~~~~Diws~G~~l~~l~~g~~pf~~  115 (252)
                      ....||+.|+|||++.+..++.++||||+||++|+|++|..||.+
T Consensus       218 ~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~pf~~  262 (345)
T 2v62_A          218 KGHNGTIEFTSLDAHKGVALSRRSDVEILGYCMLRWLCGKLPWEQ  262 (345)
T ss_dssp             GCSCSCTTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCTTGG
T ss_pred             cccCCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCccc
Confidence            224789999999999998899999999999999999999999964

>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...

Probab=99.95  E-value=1.1e-28  Score=204.18  Aligned_cols=92  Identities=26%  Similarity=0.365  Sum_probs=73.4

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCC-----Ccccc
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ-----NYIVS   75 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~-----~~~~~   75 (252)
                      ||+|||++||+||||||+|||++.++                           .++|+|||+++......     ....+
T Consensus       129 ~l~~LH~~~ivH~Dikp~NIll~~~~---------------------------~~kl~Dfg~a~~~~~~~~~~~~~~~~~  181 (327)
T 3poz_A          129 GMNYLEDRRLVHRDLAARNVLVKTPQ---------------------------HVKITDFGLAKLLGAEEKEYHAEGGKV  181 (327)
T ss_dssp             HHHHHHHTTCCCSCCCGGGEEEEETT---------------------------EEEECCTTHHHHHTTTCC-------CC
T ss_pred             HHHHHhhCCeeCCCCChheEEECCCC---------------------------CEEEccCcceeEccCCcccccccCCCc
Confidence            68999999999999999999996544                           46677777665432221     12345


Q ss_pred             CCCcccchhhhcCCCCccchhHhHHHHHHHHHh-CCCCCCCCChH
Q 025467           76 TRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHENL  119 (252)
Q Consensus        76 t~~y~aPE~l~~~~~~~~~Diws~G~~l~~l~~-g~~pf~~~~~~  119 (252)
                      |..|+|||++.+..++.++||||+||++|++++ |..||.+....
T Consensus       182 t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~  226 (327)
T 3poz_A          182 PIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPAS  226 (327)
T ss_dssp             CGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGG
T ss_pred             cccccChHHhccCCCCchhhhhhhHHHHHHHHhcCCCCccCCCHH
Confidence            778999999999999999999999999999999 99999876543

>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}

Probab=99.95  E-value=1.1e-28  Score=207.48  Aligned_cols=144  Identities=21%  Similarity=0.286  Sum_probs=109.4

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCcccc-----CCCCCcccc
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYE-----RPDQNYIVS   75 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~-----~~~~~~~~~   75 (252)
                      ||+|||++||+||||||+|||++.++                        ....++|+|||+++..     ........+
T Consensus       193 aL~~LH~~~ivHrDlkp~NIll~~~~------------------------~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~  248 (367)
T 3l9p_A          193 GCQYLEENHFIHRDIAARNCLLTCPG------------------------PGRVAKIGDFGMARDIYRAGYYRKGGCAML  248 (367)
T ss_dssp             HHHHHHHTTCCCSCCCGGGEEESCSS------------------------TTCCEEECCCHHHHHHHHHSSCTTCCGGGS
T ss_pred             HHHHHHhCCeeCCCCChhhEEEecCC------------------------CCceEEECCCccccccccccccccCCCcCC
Confidence            68999999999999999999996432                        2335788888887532     112223467


Q ss_pred             CCCcccchhhhcCCCCccchhHhHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHHHHHHhhcCCCC
Q 025467           76 TRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLD  154 (252)
Q Consensus        76 t~~y~aPE~l~~~~~~~~~Diws~G~~l~~l~~-g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~  154 (252)
                      |+.|+|||++.+..++.++||||+||++|+|++ |..||.+....+....+....                      ...
T Consensus       249 t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~pf~~~~~~~~~~~i~~~~----------------------~~~  306 (367)
T 3l9p_A          249 PVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGG----------------------RMD  306 (367)
T ss_dssp             CGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHTTC----------------------CCC
T ss_pred             cccEECHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCC----------------------CCC
Confidence            889999999999899999999999999999998 999998776554443322110                      000


Q ss_pred             CCccccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCCCC
Q 025467          155 WPEGAASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRL  234 (252)
Q Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~  234 (252)
                      .                                                       ....+..+.+|+.+||+.||++||
T Consensus       307 ~-------------------------------------------------------~~~~~~~l~~li~~~l~~dP~~Rp  331 (367)
T 3l9p_A          307 P-------------------------------------------------------PKNCPGPVYRIMTQCWQHQPEDRP  331 (367)
T ss_dssp             C-------------------------------------------------------CTTCCHHHHHHHHHHTCSSGGGSC
T ss_pred             C-------------------------------------------------------CccCCHHHHHHHHHHcCCCHhHCc
Confidence            0                                                       122346789999999999999999


Q ss_pred             CHHHHHcCCCC
Q 025467          235 TAREALRHPFF  245 (252)
Q Consensus       235 ta~e~l~hpwf  245 (252)
                      |+.++++|.|+
T Consensus       332 s~~eil~~l~~  342 (367)
T 3l9p_A          332 NFAIILERIEY  342 (367)
T ss_dssp             CHHHHHHHHHH
T ss_pred             CHHHHHHHHHH
Confidence            99999998654

>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*

Probab=99.95  E-value=3.3e-29  Score=207.23  Aligned_cols=149  Identities=26%  Similarity=0.387  Sum_probs=89.5

Q ss_pred             Chhhhhcc-CccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCC--CccccCC
Q 025467            1 MFAVMHDL-CMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ--NYIVSTR   77 (252)
Q Consensus         1 aL~~lH~~-~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~--~~~~~t~   77 (252)
                      ||.|||+. ||+||||||+||+++.++                           .++|+|||.+.......  ....||+
T Consensus       137 ~l~~lH~~~~ivH~dlkp~NIll~~~~---------------------------~~kl~Dfg~~~~~~~~~~~~~~~gt~  189 (327)
T 3aln_A          137 ALNHLKENLKIIHRDIKPSNILLDRSG---------------------------NIKLCDFGISGQLVDSIAKTRDAGCR  189 (327)
T ss_dssp             HHHHHHHHHSCCCSCCCGGGEEEETTT---------------------------EEEECCCSSSCC--------------
T ss_pred             HHHHHhccCCEeECCCCHHHEEEcCCC---------------------------CEEEccCCCceecccccccccCCCCc
Confidence            58999998 999999999999996544                           46666666665432221  1236889


Q ss_pred             Ccccchhh----hcCCCCccchhHhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHHHHHHhhcCCC
Q 025467           78 HYRAPEVI----LGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRL  153 (252)
Q Consensus        78 ~y~aPE~l----~~~~~~~~~Diws~G~~l~~l~~g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~  153 (252)
                      .|+|||++    .+..++.++||||+||++|+|++|..||.+.....  ..+....                   .....
T Consensus       190 ~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~--~~~~~~~-------------------~~~~~  248 (327)
T 3aln_A          190 PYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSVF--DQLTQVV-------------------KGDPP  248 (327)
T ss_dssp             ----------------CCSHHHHHHHHHHHHHHHHSCCCSSCC---------CCCC-------------------CSCCC
T ss_pred             cccCceeeccccCcCCCCchhhHHHHHHHHHHHHHCCCCCCCcchHH--HHHHHHh-------------------cCCCC
Confidence            99999998    45568899999999999999999999997543210  0000000                   00000


Q ss_pred             CCCccccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCCC
Q 025467          154 DWPEGAASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDR  233 (252)
Q Consensus       154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R  233 (252)
                      ..+                                                   .......+..+.+|+.+||+.||++|
T Consensus       249 ~~~---------------------------------------------------~~~~~~~~~~l~~li~~~l~~dp~~R  277 (327)
T 3aln_A          249 QLS---------------------------------------------------NSEEREFSPSFINFVNLCLTKDESKR  277 (327)
T ss_dssp             CCC---------------------------------------------------CCSSCCCCHHHHHHHHHHTCSSGGGS
T ss_pred             CCC---------------------------------------------------CcccccCCHHHHHHHHHHhhCChhhC
Confidence            000                                                   00112356789999999999999999


Q ss_pred             CCHHHHHcCCCCCCc
Q 025467          234 LTAREALRHPFFTRD  248 (252)
Q Consensus       234 ~ta~e~l~hpwf~~~  248 (252)
                      ||+.++++||||...
T Consensus       278 ps~~ell~hp~~~~~  292 (327)
T 3aln_A          278 PKYKELLKHPFILMY  292 (327)
T ss_dssp             CCHHHHTTSHHHHHH
T ss_pred             cCHHHHHhChHHHHh
Confidence            999999999999754

>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A

Probab=99.95  E-value=1.1e-28  Score=200.85  Aligned_cols=93  Identities=26%  Similarity=0.391  Sum_probs=73.2

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCC----------C
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD----------Q   70 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~----------~   70 (252)
                      ||+|||++||+||||||+|||+...                        .....++|+|||.+......          .
T Consensus       117 ~l~~LH~~~ivH~Dlkp~NIl~~~~------------------------~~~~~~kL~Dfg~a~~~~~~~~~~~~~~~~~  172 (296)
T 4hgt_A          117 RIEYIHSKNFIHRDVKPDNFLMGLG------------------------KKGNLVYIIDFGLAKKYRDARTHQHIPYREN  172 (296)
T ss_dssp             HHHHHHHTTEECSCCSGGGEEECCG------------------------GGTTCEEECCCTTCEECBCTTTCCBCCCCCS
T ss_pred             HHHHHHHCCeecCCCCHHHeeeecc------------------------CCCCeEEEecCccceeccCcccCccCCCCcc
Confidence            6899999999999999999999321                        12234666666666533221          1


Q ss_pred             CccccCCCcccchhhhcCCCCccchhHhHHHHHHHHHhCCCCCCCCC
Q 025467           71 NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHE  117 (252)
Q Consensus        71 ~~~~~t~~y~aPE~l~~~~~~~~~Diws~G~~l~~l~~g~~pf~~~~  117 (252)
                      ....||+.|+|||++.+..++.++||||+||++|++++|..||.+..
T Consensus       173 ~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~  219 (296)
T 4hgt_A          173 KNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLK  219 (296)
T ss_dssp             CCCCSCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCC
T ss_pred             cccCCCccccchHHhcCCCCCchhHHHHHHHHHHHHhcCCCCCcccc
Confidence            23478999999999999899999999999999999999999997643

>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}

Probab=99.95  E-value=7.9e-28  Score=203.19  Aligned_cols=94  Identities=26%  Similarity=0.340  Sum_probs=75.1

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCC-----CCcccc
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD-----QNYIVS   75 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~-----~~~~~~   75 (252)
                      ||+|||++||+||||||+|||++.+                           +.++|+|||.+......     .....+
T Consensus       203 aL~~LH~~~ivH~Dlkp~NIll~~~---------------------------~~~kL~DFG~a~~~~~~~~~~~~~~~~~  255 (382)
T 3tt0_A          203 GMEYLASKKCIHRDLAARNVLVTED---------------------------NVMKIADFGLARDIHHIDYYKKTTNGRL  255 (382)
T ss_dssp             HHHHHHHTTCCCSCCCGGGEEECTT---------------------------CCEEECSCSCCCCSSCCCTTCCCTTCCC
T ss_pred             HHHHHHhCCEecCCCCcceEEEcCC---------------------------CcEEEcccCcccccccccccccccCCCC
Confidence            6899999999999999999999544                           45677777766543221     122356


Q ss_pred             CCCcccchhhhcCCCCccchhHhHHHHHHHHHh-CCCCCCCCChHHH
Q 025467           76 TRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHENLEH  121 (252)
Q Consensus        76 t~~y~aPE~l~~~~~~~~~Diws~G~~l~~l~~-g~~pf~~~~~~~~  121 (252)
                      |+.|+|||++.+..++.++||||+||+++++++ |..||.+.+..+.
T Consensus       256 t~~y~aPE~~~~~~~~~~~DiwslG~il~ellt~g~~p~~~~~~~~~  302 (382)
T 3tt0_A          256 PVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEEL  302 (382)
T ss_dssp             GGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHH
T ss_pred             CcceeCHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHH
Confidence            778999999999899999999999999999999 9999987654443

>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}

Probab=99.95  E-value=4e-28  Score=200.86  Aligned_cols=93  Identities=27%  Similarity=0.374  Sum_probs=70.6

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCC-----Ccccc
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ-----NYIVS   75 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~-----~~~~~   75 (252)
                      ||+|||++||+||||||+|||++.++                           .++|+|||.+.......     ....+
T Consensus       129 aL~~LH~~~ivH~Dikp~NIl~~~~~---------------------------~~kL~DfG~a~~~~~~~~~~~~~~~~~  181 (327)
T 3lzb_A          129 GMNYLEDRRLVHRDLAARNVLVKTPQ---------------------------HVKITDFGLAKLLGAEEKEYHAEGGKV  181 (327)
T ss_dssp             HHHHHHHTTCCCSCCCGGGEEEEETT---------------------------EEEECCTTC----------------CC
T ss_pred             HHHHHhhCCCcCCCCCHHHEEEcCCC---------------------------CEEEccCcceeEccCccccccccCCCc
Confidence            68999999999999999999996554                           45666666664332211     11345


Q ss_pred             CCCcccchhhhcCCCCccchhHhHHHHHHHHHh-CCCCCCCCChHH
Q 025467           76 TRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHENLE  120 (252)
Q Consensus        76 t~~y~aPE~l~~~~~~~~~Diws~G~~l~~l~~-g~~pf~~~~~~~  120 (252)
                      |..|+|||++.+..++.++||||+||++|++++ |..||.+.....
T Consensus       182 t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~  227 (327)
T 3lzb_A          182 PIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE  227 (327)
T ss_dssp             CGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGG
T ss_pred             cccccCHHHHcCCCCChHHHHHHHHHHHHHHHHCCCCCCCCCCHHH
Confidence            778999999999999999999999999999999 999998765443

>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*

Probab=99.95  E-value=1.4e-27  Score=197.70  Aligned_cols=95  Identities=21%  Similarity=0.281  Sum_probs=76.6

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCC----------C
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD----------Q   70 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~----------~   70 (252)
                      ||+|||++||+||||||+|||++.++.                      .....++|+|||++......          .
T Consensus       117 ~l~~LH~~~iiHrDlkp~Nill~~~~~----------------------~~~~~~kl~DFg~a~~~~~~~~~~~~~~~~~  174 (330)
T 2izr_A          117 RMEYVHSKNLIYRDVKPENFLIGRPGN----------------------KTQQVIHIIDFALAKEYIDPETKKHIPYREH  174 (330)
T ss_dssp             HHHHHHHTTEECCCCCGGGEEECCGGG----------------------TCTTSEEECCCTTCEESBCTTTCCBCCCCCC
T ss_pred             HHHHHHhCCeeccCCCHHHeeeccCCC----------------------CCCceEEEEEcccceeeecCCCCcccccccc
Confidence            689999999999999999999965442                      11223777888877643221          1


Q ss_pred             CccccCCCcccchhhhcCCCCccchhHhHHHHHHHHHhCCCCCCCCC
Q 025467           71 NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHE  117 (252)
Q Consensus        71 ~~~~~t~~y~aPE~l~~~~~~~~~Diws~G~~l~~l~~g~~pf~~~~  117 (252)
                      ....||+.|+|||++.+..++.++||||+||++|+|++|..||.+..
T Consensus       175 ~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~Pf~~~~  221 (330)
T 2izr_A          175 KSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQGLK  221 (330)
T ss_dssp             CCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTTTCC
T ss_pred             CCcCCCccccChHHHcCCCCCchhHHHHHHHHHHHHhcCCCCccccc
Confidence            23578999999999999899999999999999999999999998754

>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A

Probab=99.95  E-value=9.3e-28  Score=195.55  Aligned_cols=92  Identities=26%  Similarity=0.391  Sum_probs=73.5

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCC----------C
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD----------Q   70 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~----------~   70 (252)
                      ||+|||++||+||||||+|||++..                        +....++|+|||.+......          .
T Consensus       117 ~l~~lH~~~ivH~dlkp~NIl~~~~------------------------~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~  172 (296)
T 3uzp_A          117 RIEYIHSKNFIHRDVKPDNFLMGLG------------------------KKGNLVYIIDFGLAKKYRDARTHQHIPYREN  172 (296)
T ss_dssp             HHHHHHHTTEECSCCCGGGEEECCG------------------------GGTTCEEECCCTTCEECBCTTTCCBCCCCCS
T ss_pred             HHHHHHhCCeeeCCCCHHHeEEecC------------------------CCCCeEEEeeCCCcccccccccccccccccc
Confidence            6899999999999999999999421                        12334667777766533221          1


Q ss_pred             CccccCCCcccchhhhcCCCCccchhHhHHHHHHHHHhCCCCCCCC
Q 025467           71 NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTH  116 (252)
Q Consensus        71 ~~~~~t~~y~aPE~l~~~~~~~~~Diws~G~~l~~l~~g~~pf~~~  116 (252)
                      ....||+.|+|||++.+..++.++||||+||++|++++|..||.+.
T Consensus       173 ~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~  218 (296)
T 3uzp_A          173 KNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGL  218 (296)
T ss_dssp             CCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSC
T ss_pred             cccccccccCChhhhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCc
Confidence            2347899999999999989999999999999999999999999764

>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*

Probab=99.95  E-value=1.2e-27  Score=194.11  Aligned_cols=96  Identities=26%  Similarity=0.351  Sum_probs=77.5

Q ss_pred             ChhhhhccC--ccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCCCccccCCC
Q 025467            1 MFAVMHDLC--MIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRH   78 (252)
Q Consensus         1 aL~~lH~~~--ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~~~~~~t~~   78 (252)
                      ||+|||++|  |+||||||+||+++..+.                      .....++|+|||.+...........||+.
T Consensus       134 ~l~~lH~~~~~ivH~dikp~Nil~~~~~~----------------------~~~~~~kl~Dfg~~~~~~~~~~~~~g~~~  191 (287)
T 4f0f_A          134 GIEYMQNQNPPIVHRDLRSPNIFLQSLDE----------------------NAPVCAKVADFGLSQQSVHSVSGLLGNFQ  191 (287)
T ss_dssp             HHHHHHTSSSCCBCSCCSGGGEEESCCCT----------------------TCSCCEEECCCTTCBCCSSCEECCCCCCT
T ss_pred             HHHHHHhCCCCeecCCCCcceEEEeccCC----------------------CCceeEEeCCCCccccccccccccCCCcc
Confidence            689999999  999999999999965431                      22334789999988765554445678999


Q ss_pred             cccchhhh--cCCCCccchhHhHHHHHHHHHhCCCCCCCCCh
Q 025467           79 YRAPEVIL--GLGWTYPCDIWSVGCILVELCTGEALFQTHEN  118 (252)
Q Consensus        79 y~aPE~l~--~~~~~~~~Diws~G~~l~~l~~g~~pf~~~~~  118 (252)
                      |+|||++.  ...++.++||||+||++|++++|..||.....
T Consensus       192 y~aPE~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~  233 (287)
T 4f0f_A          192 WMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSY  233 (287)
T ss_dssp             TSCGGGSSCSSCEECHHHHHHHHHHHHHHHHHSSCTTTTCCC
T ss_pred             ccCchhhccCCCCcCchhhHHHHHHHHHHHHcCCCCCccccc
Confidence            99999984  34578899999999999999999999976543

>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=99.95  E-value=7.2e-28  Score=193.81  Aligned_cols=96  Identities=28%  Similarity=0.480  Sum_probs=76.4

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCC----CCccccC
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD----QNYIVST   76 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~----~~~~~~t   76 (252)
                      ||+|||++||+||||||+||+++.+                           +.++|+|||.+......    .....+|
T Consensus       118 ~l~~lH~~~i~H~dikp~Nil~~~~---------------------------~~~kl~Dfg~~~~~~~~~~~~~~~~~~~  170 (269)
T 4hcu_A          118 GMAYLEEACVIHRDLAARNCLVGEN---------------------------QVIKVSDFGMTRFVLDDQYTSSTGTKFP  170 (269)
T ss_dssp             HHHHHHHTTCCCSCCCGGGEEECGG---------------------------GCEEECCTTGGGGBCCHHHHSTTSTTCC
T ss_pred             HHHHHHhCCeecCCcchheEEEcCC---------------------------CCEEeccccccccccccccccccCcccc
Confidence            6899999999999999999999543                           45677777776543221    1223457


Q ss_pred             CCcccchhhhcCCCCccchhHhHHHHHHHHHh-CCCCCCCCChHHHHH
Q 025467           77 RHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHENLEHLA  123 (252)
Q Consensus        77 ~~y~aPE~l~~~~~~~~~Diws~G~~l~~l~~-g~~pf~~~~~~~~~~  123 (252)
                      ..|+|||++.+..++.++||||+||++|++++ |..||.+........
T Consensus       171 ~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~~g~~p~~~~~~~~~~~  218 (269)
T 4hcu_A          171 VKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVE  218 (269)
T ss_dssp             GGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHH
T ss_pred             cccCCHHHhcCCCCCchhhhHHHHHHHHHHhcCCCCCCCCCCHHHHHH
Confidence            78999999998899999999999999999999 999998766554443

>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*

Probab=99.94  E-value=3.5e-28  Score=196.93  Aligned_cols=95  Identities=26%  Similarity=0.392  Sum_probs=68.5

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCC----CccccC
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ----NYIVST   76 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~----~~~~~t   76 (252)
                      ||+|||++||+||||||+|||++.++                           .++|+|||.+.......    ....++
T Consensus       128 ~l~~lH~~~i~H~dlkp~Nil~~~~~---------------------------~~kl~Dfg~~~~~~~~~~~~~~~~~~~  180 (281)
T 1mp8_A          128 ALAYLESKRFVHRDIAARNVLVSSND---------------------------CVKLGDFGLSRYMEDSTYYKASKGKLP  180 (281)
T ss_dssp             HHHHHHHTTCCCSCCSGGGEEEEETT---------------------------EEEECC-------------------CC
T ss_pred             HHHHHHhCCeecccccHHHEEECCCC---------------------------CEEECccccccccCcccccccccCCCc
Confidence            68999999999999999999996554                           45666666654332211    123456


Q ss_pred             CCcccchhhhcCCCCccchhHhHHHHHHHHHh-CCCCCCCCChHHHH
Q 025467           77 RHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHENLEHL  122 (252)
Q Consensus        77 ~~y~aPE~l~~~~~~~~~Diws~G~~l~~l~~-g~~pf~~~~~~~~~  122 (252)
                      +.|+|||++.+..++.++||||+||++|++++ |..||.+....+..
T Consensus       181 ~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~pf~~~~~~~~~  227 (281)
T 1mp8_A          181 IKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVI  227 (281)
T ss_dssp             GGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHH
T ss_pred             ccccChhhcccCCCCCccCchHHHHHHHHHHhcCCCCCCcCCHHHHH
Confidence            78999999998899999999999999999996 99999876654433

>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}

Probab=99.94  E-value=6.2e-28  Score=199.59  Aligned_cols=96  Identities=28%  Similarity=0.390  Sum_probs=74.5

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCC------Cccc
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ------NYIV   74 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~------~~~~   74 (252)
                      ||+|||++||+||||||+|||++.                           .+.++|+|||.+.......      ....
T Consensus       163 ~L~~LH~~~ivH~Dlkp~NIll~~---------------------------~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~  215 (325)
T 3kul_A          163 GMRYLSDLGYVHRDLAARNVLVDS---------------------------NLVCKVSDFGLSRVLEDDPDAAYTTTGGK  215 (325)
T ss_dssp             HHHHHHHTTEECSCCSGGGEEECT---------------------------TCCEEECCCSSCEECC----CCEECC---
T ss_pred             HHHHHHHCCeeCCCCCcceEEECC---------------------------CCCEEECCCCcccccccCccceeeccCCC
Confidence            689999999999999999999944                           4456777777765433221      1124


Q ss_pred             cCCCcccchhhhcCCCCccchhHhHHHHHHHHHh-CCCCCCCCChHHHHH
Q 025467           75 STRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHENLEHLA  123 (252)
Q Consensus        75 ~t~~y~aPE~l~~~~~~~~~Diws~G~~l~~l~~-g~~pf~~~~~~~~~~  123 (252)
                      +|+.|+|||++.+..++.++||||+||++|++++ |..||.+....+...
T Consensus       216 ~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~~~  265 (325)
T 3kul_A          216 IPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNRDVIS  265 (325)
T ss_dssp             CCGGGSCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTSCHHHHHH
T ss_pred             CcccccCHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCcccCCHHHHHH
Confidence            5678999999998889999999999999999999 999998776655443

>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A

Probab=99.94  E-value=8.7e-28  Score=207.06  Aligned_cols=94  Identities=24%  Similarity=0.377  Sum_probs=74.9

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCCCccccCCCcc
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYR   80 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~~~~~~t~~y~   80 (252)
                      ||+|||++||+||||||+|||++.                           .+.+||+|||+++..........++..|+
T Consensus       301 ~l~~LH~~~ivHrDlkp~Nill~~---------------------------~~~~kl~DfG~a~~~~~~~~~~~~~~~y~  353 (450)
T 1k9a_A          301 AMEYLEGNNFVHRDLAARNVLVSE---------------------------DNVAKVSDFGLTKEASSTQDTGKLPVKWT  353 (450)
T ss_dssp             HHHHHHHTTEECSCCCGGGEEECT---------------------------TSCEEECCCTTCEECC------CCCTTTS
T ss_pred             HHHHHHhCCeeCCCCCHhhEEECC---------------------------CCCEEEeeCCCcccccccccCCCCCccee
Confidence            689999999999999999999944                           44577788887765443333345678899


Q ss_pred             cchhhhcCCCCccchhHhHHHHHHHHHh-CCCCCCCCChHHH
Q 025467           81 APEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHENLEH  121 (252)
Q Consensus        81 aPE~l~~~~~~~~~Diws~G~~l~~l~~-g~~pf~~~~~~~~  121 (252)
                      |||++.+..++.++|||||||++|+|++ |..||.+....+.
T Consensus       354 aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~~~  395 (450)
T 1k9a_A          354 APEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDV  395 (450)
T ss_dssp             CHHHHHSSCCCHHHHHHHHHHHHHHHHTTTCCSSTTSCTTTH
T ss_pred             CHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHH
Confidence            9999999999999999999999999998 9999986654433

>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A

Probab=99.94  E-value=1.3e-27  Score=200.59  Aligned_cols=91  Identities=18%  Similarity=0.321  Sum_probs=73.5

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCC----------C
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD----------Q   70 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~----------~   70 (252)
                      ||+|||++||+||||||+|||++.+                         ....++|+|||+++.....          .
T Consensus       164 ~l~~lH~~~iiHrDlkp~Nill~~~-------------------------~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~  218 (364)
T 3op5_A          164 ILEYIHEHEYVHGDIKASNLLLNYK-------------------------NPDQVYLVDYGLAYRYCPEGVHKAYAADPK  218 (364)
T ss_dssp             HHHHHHHTTEECCCCCGGGEEEESS-------------------------CTTCEEECCCTTCEESSGGGCCCCSSCCSS
T ss_pred             HHHHHHHCCeEEecCCHHHEEEecC-------------------------CCCeEEEEECCcceecccCCcccccccCcc
Confidence            6899999999999999999999621                         2345677777776432211          1


Q ss_pred             CccccCCCcccchhhhcCCCCccchhHhHHHHHHHHHhCCCCCCCC
Q 025467           71 NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTH  116 (252)
Q Consensus        71 ~~~~~t~~y~aPE~l~~~~~~~~~Diws~G~~l~~l~~g~~pf~~~  116 (252)
                      ....||+.|+|||++.+..++.++||||+||++|+|++|..||.+.
T Consensus       219 ~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~Pf~~~  264 (364)
T 3op5_A          219 RCHDGTIEFTSIDAHNGVAPSRRGDLEILGYCMIQWLTGHLPWEDN  264 (364)
T ss_dssp             CCCCCCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGG
T ss_pred             cccCCCCCccCHHHhCCCCCCchhhHHHHHHHHHHHHhCCCCcccc
Confidence            2235899999999999988999999999999999999999999754

>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*

Probab=99.94  E-value=6.1e-28  Score=194.08  Aligned_cols=95  Identities=28%  Similarity=0.425  Sum_probs=75.4

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCC----CccccC
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ----NYIVST   76 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~----~~~~~t   76 (252)
                      ||+|||++||+||||||+||+++.                           .+.++|+|||.+.......    ....+|
T Consensus       116 ~l~~lH~~~i~H~dikp~Nil~~~---------------------------~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~  168 (268)
T 3sxs_A          116 GMAFLESHQFIHRDLAARNCLVDR---------------------------DLCVKVSDFGMTRYVLDDQYVSSVGTKFP  168 (268)
T ss_dssp             HHHHHHHTTEEESSCSGGGEEECT---------------------------TCCEEECCTTCEEECCTTCEEECCSCCCC
T ss_pred             HHHHHHHCCeecCCcCcceEEECC---------------------------CCCEEEccCccceecchhhhhcccCCCcC
Confidence            689999999999999999999944                           4456777777765433322    112456


Q ss_pred             CCcccchhhhcCCCCccchhHhHHHHHHHHHh-CCCCCCCCChHHHH
Q 025467           77 RHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHENLEHL  122 (252)
Q Consensus        77 ~~y~aPE~l~~~~~~~~~Diws~G~~l~~l~~-g~~pf~~~~~~~~~  122 (252)
                      +.|+|||++.+..++.++||||+||++|++++ |..||.........
T Consensus       169 ~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~  215 (268)
T 3sxs_A          169 VKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTNSEVV  215 (268)
T ss_dssp             GGGCCHHHHHHSEEETTHHHHHHHHHHHHHHTTTCCTTTTSCHHHHH
T ss_pred             cccCCHHHHhccCCchhhhhHHHHHHHHHHHcCCCCCccccChHHHH
Confidence            67999999998889999999999999999999 99999876655443

>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*

Probab=99.94  E-value=5.5e-28  Score=196.31  Aligned_cols=97  Identities=24%  Similarity=0.388  Sum_probs=76.2

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCCCccccCCCcc
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYR   80 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~~~~~~t~~y~   80 (252)
                      ||+|||++||+||||||+|||++.++..++.++                   ..++|+|||.+...... ....+|..|+
T Consensus       125 ~L~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~~-------------------~~~kl~Dfg~~~~~~~~-~~~~~~~~y~  184 (289)
T 4fvq_A          125 AMHFLEENTLIHGNVCAKNILLIREEDRKTGNP-------------------PFIKLSDPGISITVLPK-DILQERIPWV  184 (289)
T ss_dssp             HHHHHHHTTCCCCCCCGGGEEEEECCBGGGTBC-------------------CEEEECCCCSCTTTSCH-HHHHHTTTTS
T ss_pred             HHHHHhhCCeECCCcCcceEEEecCCccccccc-------------------ceeeeccCcccccccCc-cccCCcCccc
Confidence            689999999999999999999987765444332                   24799999988654332 2235788999


Q ss_pred             cchhhhc-CCCCccchhHhHHHHHHHHHhCC-CCCCCCC
Q 025467           81 APEVILG-LGWTYPCDIWSVGCILVELCTGE-ALFQTHE  117 (252)
Q Consensus        81 aPE~l~~-~~~~~~~Diws~G~~l~~l~~g~-~pf~~~~  117 (252)
                      |||++.+ ..++.++||||+||++|+|++|. +||...+
T Consensus       185 aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~  223 (289)
T 4fvq_A          185 PPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSALD  223 (289)
T ss_dssp             CHHHHHCGGGCCHHHHHHHHHHHHHHHHTTTCCTTTTSC
T ss_pred             CHHHhCCCCCCCchhHHHHHHHHHHHHHcCCCCCccccc
Confidence            9999987 56899999999999999999955 5554433

>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A

Probab=99.94  E-value=1.4e-27  Score=193.44  Aligned_cols=138  Identities=20%  Similarity=0.313  Sum_probs=104.9

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCC----CCccccC
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD----QNYIVST   76 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~----~~~~~~t   76 (252)
                      ||+|||++||+||||||+||+++.                           .+.++|+|||.+......    .....+|
T Consensus       132 ~l~~lH~~~i~H~dikp~Nili~~---------------------------~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~  184 (283)
T 3gen_A          132 AMEYLESKQFLHRDLAARNCLVND---------------------------QGVVKVSDFGLSRYVLDDEYTSSVGSKFP  184 (283)
T ss_dssp             HHHHHHHTTCCCSSCSGGGEEECT---------------------------TSCEEECSTTGGGGBCCHHHHSTTSTTSC
T ss_pred             HHHHHHHCCccCCCCccceEEEcC---------------------------CCCEEEccccccccccccccccccCCccC
Confidence            589999999999999999999944                           445777777777543221    1123457


Q ss_pred             CCcccchhhhcCCCCccchhHhHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHHHHHHhhcCCCCC
Q 025467           77 RHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDW  155 (252)
Q Consensus        77 ~~y~aPE~l~~~~~~~~~Diws~G~~l~~l~~-g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~  155 (252)
                      +.|+|||++.+..++.++||||+||++|++++ |..||...+.......+.......                      .
T Consensus       185 ~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~t~g~~p~~~~~~~~~~~~~~~~~~~~----------------------~  242 (283)
T 3gen_A          185 VRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLY----------------------R  242 (283)
T ss_dssp             GGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHHTTCCCC----------------------C
T ss_pred             cccCCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCccccChhHHHHHHhcccCCC----------------------C
Confidence            78999999998899999999999999999998 999998766554443332211000                      0


Q ss_pred             CccccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCCCCC
Q 025467          156 PEGAASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLT  235 (252)
Q Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~t  235 (252)
                                                                             ....++.+.+|+.+||+.||.+|||
T Consensus       243 -------------------------------------------------------~~~~~~~l~~li~~~l~~~p~~Rps  267 (283)
T 3gen_A          243 -------------------------------------------------------PHLASEKVYTIMYSCWHEKADERPT  267 (283)
T ss_dssp             -------------------------------------------------------CTTCCHHHHHHHHHTTCSSGGGSCC
T ss_pred             -------------------------------------------------------CCcCCHHHHHHHHHHccCChhHCcC
Confidence                                                                   0123458899999999999999999


Q ss_pred             HHHHHcC
Q 025467          236 AREALRH  242 (252)
Q Consensus       236 a~e~l~h  242 (252)
                      ++++++|
T Consensus       268 ~~~ll~~  274 (283)
T 3gen_A          268 FKILLSN  274 (283)
T ss_dssp             HHHHHHH
T ss_pred             HHHHHHH
Confidence            9999875

>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0

Probab=99.94  E-value=1e-27  Score=193.00  Aligned_cols=102  Identities=29%  Similarity=0.409  Sum_probs=74.8

Q ss_pred             ChhhhhccC---ccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCC-CccccC
Q 025467            1 MFAVMHDLC---MIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ-NYIVST   76 (252)
Q Consensus         1 aL~~lH~~~---ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~-~~~~~t   76 (252)
                      ||+|||++|   |+||||||+||+++.....                   .......++|+|||.+....... ....||
T Consensus       117 ~l~~lH~~~~~~i~H~dikp~Nil~~~~~~~-------------------~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~  177 (271)
T 3dtc_A          117 GMNYLHDEAIVPIIHRDLKSSNILILQKVEN-------------------GDLSNKILKITDFGLAREWHRTTKMSAAGA  177 (271)
T ss_dssp             HHHHHHHSSSSCCCCSCCSGGGEEESSCCSS-------------------SCCSSCCEEECCCCC-------------CC
T ss_pred             HHHHHHhCCCCceeecCCchHHEEEeccccc-------------------ccccCcceEEccCCcccccccccccCCCCc
Confidence            689999999   8999999999999643110                   00135568999999886543322 234689


Q ss_pred             CCcccchhhhcCCCCccchhHhHHHHHHHHHhCCCCCCCCChHHH
Q 025467           77 RHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEH  121 (252)
Q Consensus        77 ~~y~aPE~l~~~~~~~~~Diws~G~~l~~l~~g~~pf~~~~~~~~  121 (252)
                      +.|+|||.+.+..++.++||||+||+++++++|..||.+.+....
T Consensus       178 ~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~  222 (271)
T 3dtc_A          178 YAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGIDGLAV  222 (271)
T ss_dssp             GGGSCHHHHHHCCCSHHHHHHHHHHHHHHHHHCCCTTTTSCHHHH
T ss_pred             cceeCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH
Confidence            999999999998899999999999999999999999987665433

>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}

Probab=99.94  E-value=1.2e-27  Score=196.28  Aligned_cols=90  Identities=33%  Similarity=0.528  Sum_probs=68.9

Q ss_pred             Chhhhhc---cCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCCCccccCC
Q 025467            1 MFAVMHD---LCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTR   77 (252)
Q Consensus         1 aL~~lH~---~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~~~~~~t~   77 (252)
                      ||+|||+   +||+||||||+||+++.++                          ..++|+|||.+...........||+
T Consensus       114 ~l~~LH~~~~~~ivH~dlkp~NIll~~~~--------------------------~~~kl~Dfg~~~~~~~~~~~~~gt~  167 (307)
T 2eva_A          114 GVAYLHSMQPKALIHRDLKPPNLLLVAGG--------------------------TVLKICDFGTACDIQTHMTNNKGSA  167 (307)
T ss_dssp             HHHHHHTCSSSCCCCCCCSGGGEEEETTT--------------------------TEEEECCCCC------------CCT
T ss_pred             HHHHHHhCCCCCeecCCCChhHEEEeCCC--------------------------CEEEEcccccccccccccccCCCCC
Confidence            5899999   8999999999999995432                          1367788887765444334456899


Q ss_pred             CcccchhhhcCCCCccchhHhHHHHHHHHHhCCCCCCCC
Q 025467           78 HYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTH  116 (252)
Q Consensus        78 ~y~aPE~l~~~~~~~~~Diws~G~~l~~l~~g~~pf~~~  116 (252)
                      .|+|||++.+..++.++||||+||++|+|++|..||...
T Consensus       168 ~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~  206 (307)
T 2eva_A          168 AWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEI  206 (307)
T ss_dssp             TSSCHHHHTCCCCCTHHHHHHHHHHHHHHHHTCCTTTTT
T ss_pred             ceEChhhhCCCCCCcHHHHHHHHHHHHHHHHCCCCchhh
Confidence            999999999888999999999999999999999999754

>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7

Probab=99.94  E-value=4.6e-28  Score=201.63  Aligned_cols=92  Identities=24%  Similarity=0.340  Sum_probs=72.7

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCC-----Ccccc
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ-----NYIVS   75 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~-----~~~~~   75 (252)
                      ||+|||++||+||||||+|||++.++.                           ++|+|||.+.......     ....+
T Consensus       184 aL~~LH~~~ivH~Dikp~NIll~~~~~---------------------------~kL~Dfg~~~~~~~~~~~~~~~~~~~  236 (344)
T 1rjb_A          184 GMEFLEFKSCVHRDLAARNVLVTHGKV---------------------------VKICDFGLARDIMSDSNYVVRGNARL  236 (344)
T ss_dssp             HHHHHHHTTEEETTCSGGGEEEETTTE---------------------------EEECCCGGGSCGGGCTTSEEETTEEE
T ss_pred             HHHHHHhCCcccCCCChhhEEEcCCCc---------------------------EEeCCCccCcccccCccceeccCccC
Confidence            689999999999999999999965544                           5556666554322211     12356


Q ss_pred             CCCcccchhhhcCCCCccchhHhHHHHHHHHHh-CCCCCCCCChH
Q 025467           76 TRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHENL  119 (252)
Q Consensus        76 t~~y~aPE~l~~~~~~~~~Diws~G~~l~~l~~-g~~pf~~~~~~  119 (252)
                      |+.|+|||++.+..++.++||||+||++|+|++ |..||.+....
T Consensus       237 t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~  281 (344)
T 1rjb_A          237 PVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGIPVD  281 (344)
T ss_dssp             CGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCS
T ss_pred             ccCccCHHHhccCCCChhHhHHHHHHHHHHHHcCCCCCcccCCcH
Confidence            778999999998899999999999999999998 99999876543

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...

Probab=99.94  E-value=2.3e-27  Score=192.93  Aligned_cols=97  Identities=27%  Similarity=0.470  Sum_probs=70.3

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCC-----CCCcccc
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERP-----DQNYIVS   75 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~-----~~~~~~~   75 (252)
                      ||+|||++||+||||||+||+++.++                           .++|+|||.+.....     ......|
T Consensus       132 ~L~~lH~~~i~H~Dlkp~Nil~~~~~---------------------------~~kl~Dfg~~~~~~~~~~~~~~~~~~g  184 (289)
T 3og7_A          132 GMDYLHAKSIIHRDLKSNNIFLHEDN---------------------------TVKIGDFGLATEKSRWSGSHQFEQLSG  184 (289)
T ss_dssp             HHHHHHHTTCCCSCCCGGGEEEETTT---------------------------EEEECCCC------------------C
T ss_pred             HHHHHHhCCcccccCccceEEECCCC---------------------------CEEEccceeccccccccccccccccCC
Confidence            68999999999999999999996544                           456666666543221     1122468


Q ss_pred             CCCcccchhhh---cCCCCccchhHhHHHHHHHHHhCCCCCCCCChHHHHHH
Q 025467           76 TRHYRAPEVIL---GLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAM  124 (252)
Q Consensus        76 t~~y~aPE~l~---~~~~~~~~Diws~G~~l~~l~~g~~pf~~~~~~~~~~~  124 (252)
                      |+.|+|||++.   +..++.++||||+||++|++++|..||.+....+.+..
T Consensus       185 t~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~  236 (289)
T 3og7_A          185 SILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIE  236 (289)
T ss_dssp             CCTTCCHHHHC----CCSCHHHHHHHHHHHHHHHHHSSCTTSSCCCHHHHHH
T ss_pred             CccccCchhhcccCCCCCCcccchHHHHHHHHHHHHCCCCccccchHHHHHH
Confidence            99999999986   55688899999999999999999999987665554433

>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*

Probab=99.94  E-value=9.6e-28  Score=194.26  Aligned_cols=94  Identities=24%  Similarity=0.391  Sum_probs=72.6

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCC----CccccC
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ----NYIVST   76 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~----~~~~~t   76 (252)
                      ||+|||++||+||||||+||+++.++.                           ++|+|||.+.......    ....++
T Consensus       125 ~l~~lH~~~i~H~dlkp~Nil~~~~~~---------------------------~kl~Dfg~~~~~~~~~~~~~~~~~~~  177 (281)
T 3cc6_A          125 AMAYLESINCVHRDIAVRNILVASPEC---------------------------VKLGDFGLSRYIEDEDYYKASVTRLP  177 (281)
T ss_dssp             HHHHHHHTTCCCCCCSGGGEEEEETTE---------------------------EEECCCCGGGCC---------CCCCC
T ss_pred             HHHHHHHCCcccCCCccceEEECCCCc---------------------------EEeCccCCCcccccccccccccCCCC
Confidence            689999999999999999999966554                           5566666554332211    123457


Q ss_pred             CCcccchhhhcCCCCccchhHhHHHHHHHHHh-CCCCCCCCChHHH
Q 025467           77 RHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHENLEH  121 (252)
Q Consensus        77 ~~y~aPE~l~~~~~~~~~Diws~G~~l~~l~~-g~~pf~~~~~~~~  121 (252)
                      ..|+|||++.+..++.++||||+||++|++++ |..||........
T Consensus       178 ~~y~aPE~~~~~~~~~~~Di~slG~il~~llt~g~~p~~~~~~~~~  223 (281)
T 3cc6_A          178 IKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKDV  223 (281)
T ss_dssp             GGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCGGGH
T ss_pred             cceeCchhhccCCCCchhccHHHHHHHHHHHhCCCCCcccCChHHH
Confidence            78999999998899999999999999999998 9999976555443

>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B

Probab=99.94  E-value=2.5e-27  Score=204.37  Aligned_cols=97  Identities=28%  Similarity=0.406  Sum_probs=77.6

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCC----CCccccC
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD----QNYIVST   76 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~----~~~~~~t   76 (252)
                      ||+|||++||+||||||+|||++.                           ...+||+|||+++.....    .....++
T Consensus       296 ~l~~LH~~~ivHrDlkp~Nill~~---------------------------~~~~kl~DFG~a~~~~~~~~~~~~~~~~~  348 (454)
T 1qcf_A          296 GMAFIEQRNYIHRDLRAANILVSA---------------------------SLVCKIADFGLARVIEDNEYTAREGAKFP  348 (454)
T ss_dssp             HHHHHHHTTCCCSSCSGGGEEECT---------------------------TCCEEECSTTGGGGBCCHHHHTTCSSSSC
T ss_pred             HHHHHHhCCccCCCCCHHHEEECC---------------------------CCcEEEeeCCCceEcCCCceeccCCCccc
Confidence            689999999999999999999944                           445777777777643321    1122456


Q ss_pred             CCcccchhhhcCCCCccchhHhHHHHHHHHHh-CCCCCCCCChHHHHHH
Q 025467           77 RHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHENLEHLAM  124 (252)
Q Consensus        77 ~~y~aPE~l~~~~~~~~~Diws~G~~l~~l~~-g~~pf~~~~~~~~~~~  124 (252)
                      ..|+|||++....++.++|||||||++|+|++ |..||.+.+..+....
T Consensus       349 ~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t~g~~P~~~~~~~~~~~~  397 (454)
T 1qcf_A          349 IKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRA  397 (454)
T ss_dssp             GGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHH
T ss_pred             ccccCHHHhccCCCCcHHHHHhHHHHHHHHHhCCCCCCCCCCHHHHHHH
Confidence            78999999998899999999999999999999 9999988766555443

>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}

Probab=99.94  E-value=1.2e-27  Score=195.04  Aligned_cols=93  Identities=30%  Similarity=0.504  Sum_probs=73.1

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCC----CccccC
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ----NYIVST   76 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~----~~~~~t   76 (252)
                      ||+|||++||+||||||+||+++.                           .+.++|+|||.+.......    ....||
T Consensus       123 ~l~~lH~~~i~H~Dlkp~Nil~~~---------------------------~~~~kl~Dfg~~~~~~~~~~~~~~~~~gt  175 (294)
T 4eqm_A          123 GIKHAHDMRIVHRDIKPQNILIDS---------------------------NKTLKIFDFGIAKALSETSLTQTNHVLGT  175 (294)
T ss_dssp             HHHHHHHTTCCCCCCCGGGEEECT---------------------------TSCEEECCCSSSTTC-------------C
T ss_pred             HHHHHHHCCcccCCCCHHHEEECC---------------------------CCCEEEEeCCCccccccccccccCccccC
Confidence            689999999999999999999954                           4456777777765433221    224689


Q ss_pred             CCcccchhhhcCCCCccchhHhHHHHHHHHHhCCCCCCCCChHH
Q 025467           77 RHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLE  120 (252)
Q Consensus        77 ~~y~aPE~l~~~~~~~~~Diws~G~~l~~l~~g~~pf~~~~~~~  120 (252)
                      +.|+|||.+.+..++.++||||+||++|++++|..||.+.+...
T Consensus       176 ~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~  219 (294)
T 4eqm_A          176 VQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFNGETAVS  219 (294)
T ss_dssp             CSSCCHHHHHTCCCCTTHHHHHHHHHHHHHHHSSCSSCSSCHHH
T ss_pred             ccccCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHH
Confidence            99999999999899999999999999999999999998766543

>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*

Probab=99.94  E-value=1.7e-27  Score=192.48  Aligned_cols=91  Identities=25%  Similarity=0.394  Sum_probs=69.8

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCCCccccCCCcc
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYR   80 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~~~~~~t~~y~   80 (252)
                      ||+|||++||+||||||+||+++.                           .+.++|+|||.+...........++..|+
T Consensus       129 ~l~~lH~~~i~H~dlkp~Nil~~~---------------------------~~~~~l~Dfg~~~~~~~~~~~~~~~~~y~  181 (278)
T 1byg_A          129 AMEYLEGNNFVHRDLAARNVLVSE---------------------------DNVAKVSDFGLTKEASSTQDTGKLPVKWT  181 (278)
T ss_dssp             HHHHHHHTTCCCSCCSGGGEEECT---------------------------TSCEEECCCCC------------CCTTTS
T ss_pred             HHHHHHhCCccccCCCcceEEEeC---------------------------CCcEEEeeccccccccccccCCCcccccc
Confidence            589999999999999999999944                           44577788887765444433446788899


Q ss_pred             cchhhhcCCCCccchhHhHHHHHHHHHh-CCCCCCCCCh
Q 025467           81 APEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHEN  118 (252)
Q Consensus        81 aPE~l~~~~~~~~~Diws~G~~l~~l~~-g~~pf~~~~~  118 (252)
                      |||.+.+..++.++||||+||++|++++ |..||.....
T Consensus       182 aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~  220 (278)
T 1byg_A          182 APEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPL  220 (278)
T ss_dssp             CHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCG
T ss_pred             CHHHhCCCCCCchhcHHHHHHHHHHHHhCCCCCCCCCCH
Confidence            9999998889999999999999999998 9999976544

>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}

Probab=99.94  E-value=1.2e-27  Score=207.20  Aligned_cols=94  Identities=23%  Similarity=0.400  Sum_probs=75.4

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCC----------
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ----------   70 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~----------   70 (252)
                      ||+|||++||+||||||+|||+...                        +....++|+|||+++......          
T Consensus       115 aL~yLH~~gIvHrDIKP~NILl~~~------------------------~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~  170 (483)
T 3sv0_A          115 RVEFVHSKSFLHRDIKPDNFLMGLG------------------------RRANQVYIIDFGLAKKYRDTSTHQHIPYREN  170 (483)
T ss_dssp             HHHHHHHTTEECCCCCGGGEEECCG------------------------GGTTCEEECCCTTCEECBCTTTCCBCCCCCC
T ss_pred             HHHHHHHCCEeecccCcceEEEecC------------------------CCCCeEEEEeCCcceeccCCccccccccccc
Confidence            6899999999999999999999421                        123456777777765432221          


Q ss_pred             CccccCCCcccchhhhcCCCCccchhHhHHHHHHHHHhCCCCCCCCCh
Q 025467           71 NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHEN  118 (252)
Q Consensus        71 ~~~~~t~~y~aPE~l~~~~~~~~~Diws~G~~l~~l~~g~~pf~~~~~  118 (252)
                      ....||..|+|||++.+..++.++|||||||++|+|++|..||.+...
T Consensus       171 ~~~~gt~~Y~aPE~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~  218 (483)
T 3sv0_A          171 KNLTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKA  218 (483)
T ss_dssp             CCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCC
T ss_pred             cccCCCccccCHHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccc
Confidence            134789999999999999999999999999999999999999987543

>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*

Probab=99.94  E-value=9.5e-28  Score=197.09  Aligned_cols=92  Identities=22%  Similarity=0.359  Sum_probs=73.3

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCC-----Ccccc
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ-----NYIVS   75 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~-----~~~~~   75 (252)
                      ||+|||++||+||||||+||+++.++                           .++|+|||.+.......     ....+
T Consensus       162 ~l~~lH~~~ivH~dikp~NIli~~~~---------------------------~~kl~Dfg~~~~~~~~~~~~~~~~~~~  214 (314)
T 2ivs_A          162 GMQYLAEMKLVHRDLAARNILVAEGR---------------------------KMKISDFGLSRDVYEEDSYVKRSQGRI  214 (314)
T ss_dssp             HHHHHHHTTEECCCCSGGGEEEETTT---------------------------EEEECCCTTCEECTTTSCEECSSCCCS
T ss_pred             HHHHHHHCCCcccccchheEEEcCCC---------------------------CEEEccccccccccccccceeccCCCC
Confidence            68999999999999999999996544                           46666666665432211     12356


Q ss_pred             CCCcccchhhhcCCCCccchhHhHHHHHHHHHh-CCCCCCCCChH
Q 025467           76 TRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHENL  119 (252)
Q Consensus        76 t~~y~aPE~l~~~~~~~~~Diws~G~~l~~l~~-g~~pf~~~~~~  119 (252)
                      |+.|+|||++.+..++.++||||+||++|+|++ |..||.+....
T Consensus       215 ~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~  259 (314)
T 2ivs_A          215 PVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPPE  259 (314)
T ss_dssp             CGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCGG
T ss_pred             cccccChhhhcCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCCHH
Confidence            778999999998889999999999999999999 99999765543

>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*

Probab=99.94  E-value=1.4e-27  Score=195.90  Aligned_cols=92  Identities=28%  Similarity=0.420  Sum_probs=72.5

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCC-----Ccccc
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ-----NYIVS   75 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~-----~~~~~   75 (252)
                      ||+|||++||+||||||+||+++.++.                           ++|+|||.+.......     ....+
T Consensus       157 ~l~~lH~~~i~H~dlkp~Nil~~~~~~---------------------------~kl~Dfg~~~~~~~~~~~~~~~~~~~  209 (313)
T 1t46_A          157 GMAFLASKNCIHRDLAARNILLTHGRI---------------------------TKICDFGLARDIKNDSNYVVKGNARL  209 (313)
T ss_dssp             HHHHHHHTTCCCSCCSGGGEEEETTTE---------------------------EEECCCGGGSCTTSCTTSEECSSSEE
T ss_pred             HHHHHHHCCeecCCCccceEEEcCCCC---------------------------EEEccccccccccccccceeccCCCC
Confidence            689999999999999999999965554                           4555555554332221     12346


Q ss_pred             CCCcccchhhhcCCCCccchhHhHHHHHHHHHh-CCCCCCCCChH
Q 025467           76 TRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHENL  119 (252)
Q Consensus        76 t~~y~aPE~l~~~~~~~~~Diws~G~~l~~l~~-g~~pf~~~~~~  119 (252)
                      |+.|+|||++.+..++.++||||+||++|+|++ |..||.+....
T Consensus       210 ~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~  254 (313)
T 1t46_A          210 PVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVD  254 (313)
T ss_dssp             CGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCSS
T ss_pred             cceeeChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCCcccch
Confidence            778999999999899999999999999999998 99999876543

>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...

Probab=99.94  E-value=1.3e-27  Score=196.43  Aligned_cols=91  Identities=26%  Similarity=0.406  Sum_probs=72.5

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCC-----Ccccc
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ-----NYIVS   75 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~-----~~~~~   75 (252)
                      ||+|||++||+||||||+||+++.++.                           ++|+|||.+.......     ....+
T Consensus       160 al~~lH~~~i~H~dikp~Nil~~~~~~---------------------------~kl~Dfg~~~~~~~~~~~~~~~~~~~  212 (316)
T 2xir_A          160 GMEFLASRKCIHRDLAARNILLSEKNV---------------------------VKICDFGLARDIYKDPDYVRKGDARL  212 (316)
T ss_dssp             HHHHHHHTTCCCSCCSGGGEEECGGGC---------------------------EEECCCGGGSCTTTCTTSEEETTEEE
T ss_pred             HHHHHHhCCcccccCccceEEECCCCC---------------------------EEECCCccccccccCccceeccCCCc
Confidence            689999999999999999999965544                           5566666554332221     12356


Q ss_pred             CCCcccchhhhcCCCCccchhHhHHHHHHHHHh-CCCCCCCCCh
Q 025467           76 TRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHEN  118 (252)
Q Consensus        76 t~~y~aPE~l~~~~~~~~~Diws~G~~l~~l~~-g~~pf~~~~~  118 (252)
                      |+.|+|||++.+..++.++||||+||++|++++ |..||.+...
T Consensus       213 t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~  256 (316)
T 2xir_A          213 PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKI  256 (316)
T ss_dssp             CGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCC
T ss_pred             ceeecCchhhccccccchhHHHHHHHHHHHHHhCCCCCCcccch
Confidence            788999999999899999999999999999998 9999976553

>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*

Probab=99.94  E-value=6e-28  Score=199.39  Aligned_cols=91  Identities=29%  Similarity=0.376  Sum_probs=71.7

Q ss_pred             Chhhhhcc----------CccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCC-
Q 025467            1 MFAVMHDL----------CMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD-   69 (252)
Q Consensus         1 aL~~lH~~----------~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~-   69 (252)
                      ||+|||+.          ||+||||||+|||++.                           .+.+||+|||.+...... 
T Consensus       133 al~~LH~~~~~l~~~~~~~ivH~Dlkp~Nill~~---------------------------~~~~kL~DFg~a~~~~~~~  185 (322)
T 3soc_A          133 GLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKN---------------------------NLTACIADFGLALKFEAGK  185 (322)
T ss_dssp             HHHHHTCCEEEETTEEECEEECSCCSGGGEEECT---------------------------TCCEEECCCTTCEEECTTS
T ss_pred             HHHHHHhhccccccccCCCEEeCCCChHhEEECC---------------------------CCeEEEccCCccccccccc
Confidence            57899988          9999999999999944                           445777777777543221 


Q ss_pred             ----CCccccCCCcccchhhhcC-----CCCccchhHhHHHHHHHHHhCCCCCCCCCh
Q 025467           70 ----QNYIVSTRHYRAPEVILGL-----GWTYPCDIWSVGCILVELCTGEALFQTHEN  118 (252)
Q Consensus        70 ----~~~~~~t~~y~aPE~l~~~-----~~~~~~Diws~G~~l~~l~~g~~pf~~~~~  118 (252)
                          .....||+.|+|||++.+.     .++.++||||+||++|+|++|..||.+..+
T Consensus       186 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~  243 (322)
T 3soc_A          186 SAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVD  243 (322)
T ss_dssp             CCCCCTTCCCCGGGCCHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHTTBTTSSSCCC
T ss_pred             CccccccCccCccccCHhhcccccccCcCCCccchhHHHHHHHHHHHhCCCCCCCCcc
Confidence                1224789999999999863     355678999999999999999999976543

>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*

Probab=99.94  E-value=1.2e-27  Score=195.25  Aligned_cols=82  Identities=29%  Similarity=0.443  Sum_probs=64.9

Q ss_pred             Chhhhh--------ccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCC---
Q 025467            1 MFAVMH--------DLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD---   69 (252)
Q Consensus         1 aL~~lH--------~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~---   69 (252)
                      ||+|||        ++||+||||||+|||++.                           .+.++|+|||.+......   
T Consensus       117 ~l~~lH~~~~~~~~~~~ivH~Dlkp~Nill~~---------------------------~~~~kl~Dfg~a~~~~~~~~~  169 (301)
T 3q4u_A          117 GLAHLHIEIFGTQGKPAIAHRDLKSKNILVKK---------------------------NGQCCIADLGLAVMHSQSTNQ  169 (301)
T ss_dssp             HHHHHHSCBCSTTCBCEEECSCCCGGGEEECT---------------------------TSCEEECCCTTCEEEETTTTE
T ss_pred             HHHHHHHhhhhccCCCCeecCCCChHhEEEcC---------------------------CCCEEEeeCCCeeeccccccc
Confidence            689999        999999999999999954                           345677777766432221   


Q ss_pred             ----CCccccCCCcccchhhhcC------CCCccchhHhHHHHHHHHHhC
Q 025467           70 ----QNYIVSTRHYRAPEVILGL------GWTYPCDIWSVGCILVELCTG  109 (252)
Q Consensus        70 ----~~~~~~t~~y~aPE~l~~~------~~~~~~Diws~G~~l~~l~~g  109 (252)
                          .....||+.|+|||++.+.      .++.++||||+||++|+|++|
T Consensus       170 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DvwslG~il~el~tg  219 (301)
T 3q4u_A          170 LDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARR  219 (301)
T ss_dssp             EECCCCCCCCCGGGCCHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             ccccccccccccceeChhhhcCcCCCCcccCCchhhHHHHHHHHHHHHhh
Confidence                1223789999999999876      345789999999999999999

>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*

Probab=99.94  E-value=2.6e-27  Score=194.60  Aligned_cols=93  Identities=22%  Similarity=0.320  Sum_probs=70.5

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCC-----CCcccc
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD-----QNYIVS   75 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~-----~~~~~~   75 (252)
                      ||+|||++||+||||||+||+++.+                           +.++|+|||.+......     .....+
T Consensus       159 aL~~LH~~~ivH~dikp~NIli~~~---------------------------~~~kl~Dfg~~~~~~~~~~~~~~~~~~~  211 (313)
T 3brb_A          159 GMEYLSNRNFLHRDLAARNCMLRDD---------------------------MTVCVADFGLSKKIYSGDYYRQGRIAKM  211 (313)
T ss_dssp             HHHHHHTTTCCCCCCSGGGEEECTT---------------------------SCEEECSCSCC----------------C
T ss_pred             HHHHHHhCCcccCCCCcceEEEcCC---------------------------CcEEEeecCcceecccccccCcccccCC
Confidence            6899999999999999999999544                           44666666666543221     112356


Q ss_pred             CCCcccchhhhcCCCCccchhHhHHHHHHHHHh-CCCCCCCCChHH
Q 025467           76 TRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHENLE  120 (252)
Q Consensus        76 t~~y~aPE~l~~~~~~~~~Diws~G~~l~~l~~-g~~pf~~~~~~~  120 (252)
                      ++.|+|||.+.+..++.++||||+||++|+|++ |..||.+.....
T Consensus       212 ~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~  257 (313)
T 3brb_A          212 PVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQNHE  257 (313)
T ss_dssp             CGGGSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGG
T ss_pred             CccccCchhhcCCCccchhhhHHHHHHHHHHHhcCCCCCccCCHHH
Confidence            778999999999899999999999999999999 889997765543

>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...

Probab=99.94  E-value=2.2e-27  Score=195.73  Aligned_cols=138  Identities=25%  Similarity=0.324  Sum_probs=103.9

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCC-----Ccccc
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ-----NYIVS   75 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~-----~~~~~   75 (252)
                      ||+|||++||+||||||+||+++.                           .+.++|+|||.+.......     ....+
T Consensus       150 ~l~~lH~~~i~H~dikp~NIli~~---------------------------~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~  202 (322)
T 1p4o_A          150 GMAYLNANKFVHRDLAARNCMVAE---------------------------DFTVKIGDFGMTRDIYETDYYRKGGKGLL  202 (322)
T ss_dssp             HHHHHHHTTCBCSCCSGGGEEECT---------------------------TCCEEECCTTCCCGGGGGGCEEGGGSSEE
T ss_pred             HHHHHHHCCCccCCCccceEEEcC---------------------------CCeEEECcCccccccccccccccccCCCC
Confidence            689999999999999999999954                           4456777777765432211     12356


Q ss_pred             CCCcccchhhhcCCCCccchhHhHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHHHHHHhhcCCCC
Q 025467           76 TRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLD  154 (252)
Q Consensus        76 t~~y~aPE~l~~~~~~~~~Diws~G~~l~~l~~-g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~  154 (252)
                      |+.|+|||++.+..++.++||||+||++|++++ |..||.+.+.......+..  +.                    ...
T Consensus       203 ~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~--~~--------------------~~~  260 (322)
T 1p4o_A          203 PVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVME--GG--------------------LLD  260 (322)
T ss_dssp             CGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCHHHHHHHHHT--TC--------------------CCC
T ss_pred             CCCccChhhhccCCCCchhhHHHHHHHHHHHHhcCCCccccCCHHHHHHHHHc--CC--------------------cCC
Confidence            788999999998889999999999999999999 8899987655433322211  00                    000


Q ss_pred             CCccccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCCCC
Q 025467          155 WPEGAASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRL  234 (252)
Q Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~  234 (252)
                      .                                                       ....+..+.+|+.+||+.||.+||
T Consensus       261 ~-------------------------------------------------------~~~~~~~l~~li~~~l~~dp~~Rp  285 (322)
T 1p4o_A          261 K-------------------------------------------------------PDNCPDMLFELMRMCWQYNPKMRP  285 (322)
T ss_dssp             C-------------------------------------------------------CTTCCHHHHHHHHHHTCSSGGGSC
T ss_pred             C-------------------------------------------------------CCCCCHHHHHHHHHHcCCCcccCc
Confidence            0                                                       123456889999999999999999


Q ss_pred             CHHHHHcC
Q 025467          235 TAREALRH  242 (252)
Q Consensus       235 ta~e~l~h  242 (252)
                      |+.++++|
T Consensus       286 s~~e~l~~  293 (322)
T 1p4o_A          286 SFLEIISS  293 (322)
T ss_dssp             CHHHHHHH
T ss_pred             CHHHHHHH
Confidence            99999986

>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}

Probab=99.94  E-value=5.2e-27  Score=192.61  Aligned_cols=105  Identities=21%  Similarity=0.309  Sum_probs=69.6

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCCCccccCCCcc
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYR   80 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~~~~~~t~~y~   80 (252)
                      ||+|||++||+||||||+|||++.++.+++.|||++............        ..  ..............||+.|+
T Consensus       120 al~~lH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~--------~~--~~~~~~~~~~~~~~gt~~y~  189 (310)
T 3s95_A          120 GMAYLHSMNIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEG--------LR--SLKKPDRKKRYTVVGNPYWM  189 (310)
T ss_dssp             HHHHHHHTTEECSCCSTTSEEECTTSCEEECCCTTCEECC------------------------------CCCCSCGGGC
T ss_pred             HHHHHHhCCccCCCCCcCeEEECCCCCEEEeecccceecccccccccc--------cc--cccccccccccccCCCccee
Confidence            689999999999999999999966555444444444221111000000        00  00000000011347899999


Q ss_pred             cchhhhcCCCCccchhHhHHHHHHHHHhCCCCCCC
Q 025467           81 APEVILGLGWTYPCDIWSVGCILVELCTGEALFQT  115 (252)
Q Consensus        81 aPE~l~~~~~~~~~Diws~G~~l~~l~~g~~pf~~  115 (252)
                      |||++.+..++.++||||+||++|++++|..||..
T Consensus       190 aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~  224 (310)
T 3s95_A          190 APEMINGRSYDEKVDVFSFGIVLCEIIGRVNADPD  224 (310)
T ss_dssp             CHHHHTTCCCCTHHHHHHHHHHHHHHHHTCCSSTT
T ss_pred             CHHHhcCCCCCcHHHHHHHHHHHHHHhcCCCCCcc
Confidence            99999998999999999999999999999998854

>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}

Probab=99.94  E-value=2.5e-27  Score=197.92  Aligned_cols=92  Identities=14%  Similarity=0.236  Sum_probs=72.2

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCC----------CC
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERP----------DQ   70 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~----------~~   70 (252)
                      ||+|||++||+||||||+|||++.++                         ...++|+|||++.....          ..
T Consensus       171 ~L~~LH~~~ivH~Dikp~NIl~~~~~-------------------------~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~  225 (352)
T 2jii_A          171 ALEFLHENEYVHGNVTAENIFVDPED-------------------------QSQVTLAGYGFAFRYCPSGKHVAYVEGSR  225 (352)
T ss_dssp             HHHHHHHTTCBCSCCCGGGEEEETTE-------------------------EEEEEECCGGGCBCSSGGGCCCCCCTTSS
T ss_pred             HHHHHHhCCccCCCCCHHHEEEcCCC-------------------------CceEEEecCcceeeccCCCcccccccccc
Confidence            68999999999999999999997654                         01345555555532211          11


Q ss_pred             CccccCCCcccchhhhcCCCCccchhHhHHHHHHHHHhCCCCCCCCC
Q 025467           71 NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHE  117 (252)
Q Consensus        71 ~~~~~t~~y~aPE~l~~~~~~~~~Diws~G~~l~~l~~g~~pf~~~~  117 (252)
                      ....||+.|+|||++.+..++.++||||+||++|+|++|..||.+..
T Consensus       226 ~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~  272 (352)
T 2jii_A          226 SPHEGDLEFISMDLHKGCGPSRRSDLQSLGYCMLKWLYGFLPWTNCL  272 (352)
T ss_dssp             CTTCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGGT
T ss_pred             ccccCCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCcccCC
Confidence            22378999999999998889999999999999999999999997653

>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7

Probab=99.94  E-value=2.3e-27  Score=197.19  Aligned_cols=94  Identities=22%  Similarity=0.341  Sum_probs=74.6

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCC-----CCCcccc
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERP-----DQNYIVS   75 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~-----~~~~~~~   75 (252)
                      ||+|||++||+||||||+||+++.+                           +.++|+|||.+.....     ......+
T Consensus       186 ~l~~LH~~~ivH~Dlkp~NIl~~~~---------------------------~~~kl~Dfg~~~~~~~~~~~~~~~~~~~  238 (343)
T 1luf_A          186 GMAYLSERKFVHRDLATRNCLVGEN---------------------------MVVKIADFGLSRNIYSADYYKADGNDAI  238 (343)
T ss_dssp             HHHHHHHTTCCCSCCSGGGEEECGG---------------------------GCEEECCCSCHHHHTGGGCBC----CCB
T ss_pred             HHHHHHhCCeecCCCCcceEEECCC---------------------------CeEEEeecCCCcccccCccccccCCCcc
Confidence            5899999999999999999999544                           3567777777653221     1122357


Q ss_pred             CCCcccchhhhcCCCCccchhHhHHHHHHHHHh-CCCCCCCCChHHH
Q 025467           76 TRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHENLEH  121 (252)
Q Consensus        76 t~~y~aPE~l~~~~~~~~~Diws~G~~l~~l~~-g~~pf~~~~~~~~  121 (252)
                      |+.|+|||++.+..++.++||||+||++|+|++ |..||.+....+.
T Consensus       239 t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~  285 (343)
T 1luf_A          239 PIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYGMAHEEV  285 (343)
T ss_dssp             CGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHH
T ss_pred             cceecChhhhccCCcCcccccHHHHHHHHHHHhcCCCcCCCCChHHH
Confidence            888999999998899999999999999999999 9999987665443

>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*

Probab=99.94  E-value=2.8e-27  Score=195.20  Aligned_cols=89  Identities=25%  Similarity=0.340  Sum_probs=73.1

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCC-----CCcccc
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD-----QNYIVS   75 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~-----~~~~~~   75 (252)
                      ||+|||++||+||||||+||+++.                           .+.++|+|||.+......     .....|
T Consensus       151 ~l~~lH~~~ivH~dlkp~Nil~~~---------------------------~~~~kl~Dfg~~~~~~~~~~~~~~~~~~g  203 (321)
T 2qkw_B          151 GLHYLHTRAIIHRDVKSINILLDE---------------------------NFVPKITDFGISKKGTELDQTHLSTVVKG  203 (321)
T ss_dssp             HHHHHHHTTEECSCCCSTTEEECT---------------------------TCCEEECCCTTCEECSSSSCCCCBCCCEE
T ss_pred             HHHHhcCCCeecCCCCHHHEEECC---------------------------CCCEEEeecccccccccccccccccccCC
Confidence            689999999999999999999944                           445677777776543221     122357


Q ss_pred             CCCcccchhhhcCCCCccchhHhHHHHHHHHHhCCCCCCCC
Q 025467           76 TRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTH  116 (252)
Q Consensus        76 t~~y~aPE~l~~~~~~~~~Diws~G~~l~~l~~g~~pf~~~  116 (252)
                      |+.|+|||++.+..++.++||||+||++|+|++|..||.+.
T Consensus       204 t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~p~~~~  244 (321)
T 2qkw_B          204 TLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQS  244 (321)
T ss_dssp             ETTTCCHHHHHHCBCCTHHHHHHHHHHHHHHHHCCTTCSCS
T ss_pred             CccccCHHHhcCCCCCcccchHhHHHHHHHHHhCCCccccc
Confidence            89999999999889999999999999999999999999754

>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7

Probab=99.94  E-value=8.2e-27  Score=190.13  Aligned_cols=91  Identities=24%  Similarity=0.335  Sum_probs=70.2

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCC-------CCCcc
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERP-------DQNYI   73 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~-------~~~~~   73 (252)
                      ||+|||++||+||||||+||+++.+                           +.++|+|||.+.....       .....
T Consensus       136 ~l~~LH~~~i~H~dikp~Nili~~~---------------------------~~~kl~Dfg~~~~~~~~~~~~~~~~~~~  188 (298)
T 3pls_A          136 GMEYLAEQKFVHRDLAARNCMLDES---------------------------FTVKVADFGLARDILDREYYSVQQHRHA  188 (298)
T ss_dssp             HHHHHHHTTCCCSCCSGGGEEECTT---------------------------CCEEECCTTSSCTTTTGGGGCSCCSSCT
T ss_pred             HHHHHHhCCcccCCCCcceEEEcCC---------------------------CcEEeCcCCCcccccCCcccccccCcCC
Confidence            6899999999999999999999544                           4566666666643211       11224


Q ss_pred             ccCCCcccchhhhcCCCCccchhHhHHHHHHHHHhCC-CCCCCCCh
Q 025467           74 VSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGE-ALFQTHEN  118 (252)
Q Consensus        74 ~~t~~y~aPE~l~~~~~~~~~Diws~G~~l~~l~~g~-~pf~~~~~  118 (252)
                      .++..|+|||.+.+..++.++||||+||++|++++|. +||...+.
T Consensus       189 ~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~~~~~~~~~  234 (298)
T 3pls_A          189 RLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYRHIDP  234 (298)
T ss_dssp             TCGGGGSCHHHHTTCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCG
T ss_pred             CCCccccChhhhccCCCChhhchhhHHHHHHHHhhCCCCCCccCCH
Confidence            5678899999999989999999999999999999955 55554443

>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*

Probab=99.94  E-value=1.7e-27  Score=196.98  Aligned_cols=93  Identities=23%  Similarity=0.279  Sum_probs=72.6

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCC--CCccccCCC
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD--QNYIVSTRH   78 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~--~~~~~~t~~   78 (252)
                      ||+|||++||+||||||+||+++.++                           .++|+|||.+......  .....+++.
T Consensus       154 aL~~LH~~~ivH~dlkp~NIl~~~~~---------------------------~~kL~Dfg~~~~~~~~~~~~~~~~~~~  206 (327)
T 1fvr_A          154 GMDYLSQKQFIHRDLAARNILVGENY---------------------------VAKIADFGLSRGQEVYVKKTMGRLPVR  206 (327)
T ss_dssp             HHHHHHHTTEECSCCSGGGEEECGGG---------------------------CEEECCTTCEESSCEECCC----CCTT
T ss_pred             HHHHHHhCCccCCCCccceEEEcCCC---------------------------eEEEcccCcCccccccccccCCCCCcc
Confidence            68999999999999999999995443                           4667777766532211  122356788


Q ss_pred             cccchhhhcCCCCccchhHhHHHHHHHHHh-CCCCCCCCChHH
Q 025467           79 YRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHENLE  120 (252)
Q Consensus        79 y~aPE~l~~~~~~~~~Diws~G~~l~~l~~-g~~pf~~~~~~~  120 (252)
                      |+|||++.+..++.++||||+||++|+|++ |..||.+.+...
T Consensus       207 y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~~  249 (327)
T 1fvr_A          207 WMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAE  249 (327)
T ss_dssp             TCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCHHH
T ss_pred             ccChhhhccccCCchhcchHHHHHHHHHHcCCCCCCCCCcHHH
Confidence            999999988888999999999999999998 999998765443

>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*

Probab=99.94  E-value=3.1e-27  Score=209.97  Aligned_cols=94  Identities=31%  Similarity=0.456  Sum_probs=77.9

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCC--CccccCCC
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ--NYIVSTRH   78 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~--~~~~~t~~   78 (252)
                      ||+|||++||+||||||+||+++.++                        ....++|+|||.+.......  ....||+.
T Consensus       133 aL~yLHs~gIVHrDLKP~NILl~~~g------------------------~~~~vKL~DFG~a~~~~~~~~~~~~~gt~~  188 (676)
T 3qa8_A          133 ALRYLHENRIIHRDLKPENIVLQPGP------------------------QRLIHKIIDLGYAKELDQGELCTEFVGTLQ  188 (676)
T ss_dssp             HHHHHHHTTBCCCCCCSTTEEEECCS------------------------SSCEEEECSCCCCCBTTSCCCCCCCCSCCT
T ss_pred             HHHHHHHCCCccCCCCHHHeEeecCC------------------------CceeEEEcccccccccccccccccccCCcc
Confidence            68999999999999999999996543                        23347888888887543332  23478999


Q ss_pred             cccchhhhcCCCCccchhHhHHHHHHHHHhCCCCCCCCCh
Q 025467           79 YRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHEN  118 (252)
Q Consensus        79 y~aPE~l~~~~~~~~~Diws~G~~l~~l~~g~~pf~~~~~  118 (252)
                      |+|||++.+..++.++||||+||++|++++|..||.+...
T Consensus       189 Y~APE~l~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~  228 (676)
T 3qa8_A          189 YLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPNWQ  228 (676)
T ss_dssp             TCSSCSSCCSCCSTTHHHHHHHHHHHHHHSSCSSCCSSCH
T ss_pred             cCChHHhccCCCCchhHHHHHHHHHHHHHHCCCCCCcccc
Confidence            9999999988999999999999999999999999976543

>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7

Probab=99.94  E-value=2.4e-27  Score=199.58  Aligned_cols=91  Identities=24%  Similarity=0.330  Sum_probs=66.4

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCC-------CCcc
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD-------QNYI   73 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~-------~~~~   73 (252)
                      ||+|||++||+||||||+|||++.++                           .+||+|||+++.....       ....
T Consensus       204 aL~~LH~~~ivHrDlkp~NIll~~~~---------------------------~~kL~DFG~a~~~~~~~~~~~~~~~~~  256 (373)
T 3c1x_A          204 GMKFLASKKFVHRDLAARNCMLDEKF---------------------------TVKVADFGLARDMYDKEFDSVHNKTGA  256 (373)
T ss_dssp             HHHHHHHTTCCCSCCCGGGEEECTTC---------------------------CEEECCC--------------------
T ss_pred             HHHHHHHCCEecCccchheEEECCCC---------------------------CEEEeeccccccccccccccccccCCC
Confidence            68999999999999999999995444                           4666666666432211       1123


Q ss_pred             ccCCCcccchhhhcCCCCccchhHhHHHHHHHHHh-CCCCCCCCCh
Q 025467           74 VSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHEN  118 (252)
Q Consensus        74 ~~t~~y~aPE~l~~~~~~~~~Diws~G~~l~~l~~-g~~pf~~~~~  118 (252)
                      .+|+.|+|||++.+..++.++||||+||++|++++ |.+||...+.
T Consensus       257 ~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt~~~~p~~~~~~  302 (373)
T 3c1x_A          257 KLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNT  302 (373)
T ss_dssp             -CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCS
T ss_pred             CCcccccChHHhcCCCCCcHHHHHHHHHHHHHHHhCcCCCCCCCCH
Confidence            46778999999999899999999999999999999 6788866543

>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...

Probab=99.94  E-value=4.1e-27  Score=198.16  Aligned_cols=94  Identities=28%  Similarity=0.382  Sum_probs=66.7

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCC------Cccc
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ------NYIV   74 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~------~~~~   74 (252)
                      ||+|||++||+||||||+|||++.+                           +.++|+|||.+.......      ....
T Consensus       159 aL~~LH~~~ivH~Dlkp~NIll~~~---------------------------~~~kl~Dfg~a~~~~~~~~~~~~~~~~~  211 (373)
T 2qol_A          159 GMKYLSDMGYVHRDLAARNILINSN---------------------------LVCKVSDFGLGRVLEDDPEAAYTTRGGK  211 (373)
T ss_dssp             HHHHHHHTTCCCSCCCGGGEEECTT---------------------------CCEEECCC--------------------
T ss_pred             HHHHHHHCCeeCCCCCcceEEEcCC---------------------------CCEEECcCccccccccCCccceeccCCC
Confidence            6899999999999999999999544                           456666666665432211      1123


Q ss_pred             cCCCcccchhhhcCCCCccchhHhHHHHHHHHHh-CCCCCCCCChHHH
Q 025467           75 STRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHENLEH  121 (252)
Q Consensus        75 ~t~~y~aPE~l~~~~~~~~~Diws~G~~l~~l~~-g~~pf~~~~~~~~  121 (252)
                      ++..|+|||++.+..++.++||||+||++|++++ |..||......+.
T Consensus       212 ~~~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt~g~~P~~~~~~~~~  259 (373)
T 2qol_A          212 IPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDV  259 (373)
T ss_dssp             --CTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTC-CTTTTCCHHHH
T ss_pred             cCCCccChhhhccCCcCchhcHHHHHHHHHHHHhCCCCCCCCCCHHHH
Confidence            4678999999999899999999999999999998 9999987665443

>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}

Probab=99.94  E-value=2.4e-27  Score=196.38  Aligned_cols=104  Identities=31%  Similarity=0.423  Sum_probs=57.0

Q ss_pred             ChhhhhccC--ccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCCCccccCCC
Q 025467            1 MFAVMHDLC--MIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRH   78 (252)
Q Consensus         1 aL~~lH~~~--ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~~~~~~t~~   78 (252)
                      ||+|||++|  |+||||||+|||++.++.+++.|||++..............            ............||+.
T Consensus       148 ~l~~LH~~~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~t~~  215 (337)
T 3ll6_A          148 AVQHMHRQKPPIIHRDLKVENLLLSNQGTIKLCDFGSATTISHYPDYSWSAQ------------RRALVEEEITRNTTPM  215 (337)
T ss_dssp             HHHHHHTSSSCCBCCCCCGGGCEECTTSCEEBCCCTTCBCCSSCC-----------------------------------
T ss_pred             HHHHHHhCCCCEEEccCCcccEEECCCCCEEEecCccceeccccCccccccc------------ccccchhhccccCCCC
Confidence            689999999  99999999999997666655555555433221111000000            0000000112358899


Q ss_pred             cccchhh---hcCCCCccchhHhHHHHHHHHHhCCCCCCCC
Q 025467           79 YRAPEVI---LGLGWTYPCDIWSVGCILVELCTGEALFQTH  116 (252)
Q Consensus        79 y~aPE~l---~~~~~~~~~Diws~G~~l~~l~~g~~pf~~~  116 (252)
                      |+|||++   .+..++.++||||+||++|+|++|..||...
T Consensus       216 y~aPE~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~  256 (337)
T 3ll6_A          216 YRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFEDG  256 (337)
T ss_dssp             --------CCTTSCSSHHHHHHHHHHHHHHHHHSSCCC---
T ss_pred             cCChhhhhccccCCCChHHhHHHHHHHHHHHHhCCCCCcch
Confidence            9999998   4556889999999999999999999999643

>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...

Probab=99.94  E-value=4.1e-27  Score=202.93  Aligned_cols=144  Identities=27%  Similarity=0.367  Sum_probs=104.4

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCC----CccccC
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ----NYIVST   76 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~----~~~~~t   76 (252)
                      ||+|||++||+||||||+|||++.++                           .+||+|||+++......    ....++
T Consensus       292 ~l~~LH~~~ivHrDlkp~Nill~~~~---------------------------~~kl~DfG~a~~~~~~~~~~~~~~~~~  344 (452)
T 1fmk_A          292 GMAYVERMNYVHRDLRAANILVGENL---------------------------VCKVADFGLARLIEDNEYTARQGAKFP  344 (452)
T ss_dssp             HHHHHHHTTCCCSCCSGGGEEECGGG---------------------------CEEECCCCTTC--------------CC
T ss_pred             HHHHHHhCCeeCCCCChhhEEECCCC---------------------------CEEECCCccceecCCCceecccCCccc
Confidence            68999999999999999999995544                           45666666665432211    112456


Q ss_pred             CCcccchhhhcCCCCccchhHhHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHHHHHHhhcCCCCC
Q 025467           77 RHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDW  155 (252)
Q Consensus        77 ~~y~aPE~l~~~~~~~~~Diws~G~~l~~l~~-g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~  155 (252)
                      ..|+|||++.+..++.++|||||||++|++++ |..||.+....+....+....                      ....
T Consensus       345 ~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~~~~~~i~~~~----------------------~~~~  402 (452)
T 1fmk_A          345 IKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGY----------------------RMPC  402 (452)
T ss_dssp             GGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTTC----------------------CCCC
T ss_pred             ccccCHhHHhcCCCCccccHHhHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCC----------------------CCCC
Confidence            78999999998899999999999999999999 999998776655443322110                      0000


Q ss_pred             CccccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCCCCC
Q 025467          156 PEGAASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLT  235 (252)
Q Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~t  235 (252)
                                                                             ....++.+.+||.+||+.||++|||
T Consensus       403 -------------------------------------------------------~~~~~~~l~~li~~cl~~dP~~Rpt  427 (452)
T 1fmk_A          403 -------------------------------------------------------PPECPESLHDLMCQCWRKEPEERPT  427 (452)
T ss_dssp             -------------------------------------------------------CTTSCHHHHHHHHHHTCSSGGGSCC
T ss_pred             -------------------------------------------------------CCCCCHHHHHHHHHHccCChhhCcC
Confidence                                                                   1224568899999999999999999


Q ss_pred             HHHHHc--CCCCCCc
Q 025467          236 AREALR--HPFFTRD  248 (252)
Q Consensus       236 a~e~l~--hpwf~~~  248 (252)
                      ++++++  ..++...
T Consensus       428 ~~~l~~~L~~~~~~~  442 (452)
T 1fmk_A          428 FEYLQAFLEDYFTST  442 (452)
T ss_dssp             HHHHHHHHHTTTSCS
T ss_pred             HHHHHHHHHHHhccC
Confidence            999987  3666543

>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*

Probab=99.94  E-value=1.4e-27  Score=197.40  Aligned_cols=145  Identities=21%  Similarity=0.283  Sum_probs=108.5

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCC-----CCCcccc
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERP-----DQNYIVS   75 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~-----~~~~~~~   75 (252)
                      ||+|||++||+||||||+|||++.++                        ....++|+|||.+.....     ......+
T Consensus       152 al~~LH~~~i~H~dlkp~NIli~~~~------------------------~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~  207 (327)
T 2yfx_A          152 GCQYLEENHFIHRDIAARNCLLTCPG------------------------PGRVAKIGDFGMARDIYRASYYRKGGCAML  207 (327)
T ss_dssp             HHHHHHHTTCCCSCCCGGGEEESCSS------------------------TTCCEEECCCHHHHHHHC------CCGGGS
T ss_pred             HHHHHhhCCeecCcCCHhHEEEecCC------------------------CcceEEECccccccccccccccccCCCcCC
Confidence            68999999999999999999996432                        234578888887753211     1122467


Q ss_pred             CCCcccchhhhcCCCCccchhHhHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHHHHHHhhcCCCC
Q 025467           76 TRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLD  154 (252)
Q Consensus        76 t~~y~aPE~l~~~~~~~~~Diws~G~~l~~l~~-g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~  154 (252)
                      ++.|+|||++.+..++.++||||+||++|+|++ |..||...........+....                      ...
T Consensus       208 ~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~~----------------------~~~  265 (327)
T 2yfx_A          208 PVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGG----------------------RMD  265 (327)
T ss_dssp             CGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHTTC----------------------CCC
T ss_pred             CcceeCHhHhcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCcCHHHHHHHHhcCC----------------------CCC
Confidence            889999999998899999999999999999998 999998766544333221100                      000


Q ss_pred             CCccccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCCCC
Q 025467          155 WPEGAASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRL  234 (252)
Q Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~  234 (252)
                      .                                                       ....+..+.+||.+||+.||.+||
T Consensus       266 ~-------------------------------------------------------~~~~~~~l~~li~~~l~~dp~~Rp  290 (327)
T 2yfx_A          266 P-------------------------------------------------------PKNCPGPVYRIMTQCWQHQPEDRP  290 (327)
T ss_dssp             C-------------------------------------------------------CTTCCHHHHHHHHHHTCSSGGGSC
T ss_pred             C-------------------------------------------------------CCCCCHHHHHHHHHHhcCChhhCc
Confidence            0                                                       122346889999999999999999


Q ss_pred             CHHHHHcCCCCC
Q 025467          235 TAREALRHPFFT  246 (252)
Q Consensus       235 ta~e~l~hpwf~  246 (252)
                      |+.++++|.|+-
T Consensus       291 s~~~ll~~l~~~  302 (327)
T 2yfx_A          291 NFAIILERIEYC  302 (327)
T ss_dssp             CHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHH
Confidence            999999987753

>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=99.94  E-value=9.4e-27  Score=193.10  Aligned_cols=94  Identities=29%  Similarity=0.385  Sum_probs=70.7

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCC------Cccc
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ------NYIV   74 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~------~~~~   74 (252)
                      ||+|||++||+||||||+||+++.+                           +.++|+|||.+.......      ....
T Consensus       159 aL~~LH~~~ivH~Dikp~NIl~~~~---------------------------~~~kl~Dfg~~~~~~~~~~~~~~~~~~~  211 (333)
T 1mqb_A          159 GMKYLANMNYVHRDLAARNILVNSN---------------------------LVCKVSDFGLSRVLEDDPEATYTTSGGK  211 (333)
T ss_dssp             HHHHHHHTTCCCSCCCGGGEEECTT---------------------------CCEEECCCCC-----------------C
T ss_pred             HHHHHHhCCeeCCCCChheEEECCC---------------------------CcEEECCCCcchhhccccccccccCCCC
Confidence            6899999999999999999999544                           456666776665432211      1124


Q ss_pred             cCCCcccchhhhcCCCCccchhHhHHHHHHHHHh-CCCCCCCCChHHH
Q 025467           75 STRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHENLEH  121 (252)
Q Consensus        75 ~t~~y~aPE~l~~~~~~~~~Diws~G~~l~~l~~-g~~pf~~~~~~~~  121 (252)
                      +|..|+|||++.+..++.++||||+||++|++++ |..||.+....+.
T Consensus       212 ~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~~~  259 (333)
T 1mqb_A          212 IPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNHEV  259 (333)
T ss_dssp             CCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHH
T ss_pred             ccccccCchhcccCCCCchhhhHHHHHHHHHHHcCCCCCcccCCHHHH
Confidence            5678999999998899999999999999999998 9999987665443

>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=99.94  E-value=3e-27  Score=191.98  Aligned_cols=139  Identities=24%  Similarity=0.348  Sum_probs=103.6

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCC------Cccc
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ------NYIV   74 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~------~~~~   74 (252)
                      ||+|||++||+||||||+||+++.++.                           ++|+|||.+.......      ....
T Consensus       122 ~l~~lH~~~i~H~dlkp~Nili~~~~~---------------------------~kl~Dfg~~~~~~~~~~~~~~~~~~~  174 (287)
T 1u59_A          122 GMKYLEEKNFVHRDLAARNVLLVNRHY---------------------------AKISDFGLSKALGADDSYYTARSAGK  174 (287)
T ss_dssp             HHHHHHHTTEECCCCSGGGEEEEETTE---------------------------EEECCCTTCEECTTCSCEECCCCSSC
T ss_pred             HHHHHHHCCEeeCCCchheEEEcCCCC---------------------------EEECcccceeeeccCcceeecccccc
Confidence            689999999999999999999966554                           5566666554332211      1234


Q ss_pred             cCCCcccchhhhcCCCCccchhHhHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHHHHHHhhcCCC
Q 025467           75 STRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRL  153 (252)
Q Consensus        75 ~t~~y~aPE~l~~~~~~~~~Diws~G~~l~~l~~-g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~  153 (252)
                      +|+.|+|||++.+..++.++||||+||++|++++ |..||.+....+....+..  +.                    ..
T Consensus       175 ~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~i~~--~~--------------------~~  232 (287)
T 1u59_A          175 WPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQ--GK--------------------RM  232 (287)
T ss_dssp             CCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCTHHHHHHHHT--TC--------------------CC
T ss_pred             ccccccCHHHhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCHHHHHHHHhc--CC--------------------cC
Confidence            5788999999988889999999999999999998 9999987665443332211  00                    00


Q ss_pred             CCCccccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCCC
Q 025467          154 DWPEGAASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDR  233 (252)
Q Consensus       154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R  233 (252)
                      ..                                                       ....++++.+||.+||+.||++|
T Consensus       233 ~~-------------------------------------------------------~~~~~~~l~~li~~~l~~~p~~R  257 (287)
T 1u59_A          233 EC-------------------------------------------------------PPECPPELYALMSDCWIYKWEDR  257 (287)
T ss_dssp             CC-------------------------------------------------------CTTCCHHHHHHHHHTTCSSGGGS
T ss_pred             CC-------------------------------------------------------CCCcCHHHHHHHHHHcCCChhhC
Confidence            00                                                       12345689999999999999999


Q ss_pred             CCHHHHHcCC
Q 025467          234 LTAREALRHP  243 (252)
Q Consensus       234 ~ta~e~l~hp  243 (252)
                      ||+.++++|.
T Consensus       258 ps~~~l~~~l  267 (287)
T 1u59_A          258 PDFLTVEQRM  267 (287)
T ss_dssp             CCHHHHHHHH
T ss_pred             cCHHHHHHHH
Confidence            9999999863

>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...

Probab=99.94  E-value=5.4e-27  Score=194.52  Aligned_cols=94  Identities=24%  Similarity=0.346  Sum_probs=74.8

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCC-----Ccccc
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ-----NYIVS   75 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~-----~~~~~   75 (252)
                      ||+|||++||+||||||+||+++.+                           +.++|+|||.+.......     ....+
T Consensus       169 aL~~LH~~~ivH~Dlkp~NIll~~~---------------------------~~~kL~Dfg~~~~~~~~~~~~~~~~~~~  221 (334)
T 2pvf_A          169 GMEYLASQKCIHRDLAARNVLVTEN---------------------------NVMKIADFGLARDINNIDYYKKTTNGRL  221 (334)
T ss_dssp             HHHHHHHTTEECSCCSGGGEEECTT---------------------------CCEEECCCTTCEECTTTSSEECCSCCCC
T ss_pred             HHHHHHhCCeeCCCCccceEEEcCC---------------------------CCEEEccccccccccccccccccCCCCc
Confidence            6899999999999999999999543                           456777777665433221     12356


Q ss_pred             CCCcccchhhhcCCCCccchhHhHHHHHHHHHh-CCCCCCCCChHHH
Q 025467           76 TRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHENLEH  121 (252)
Q Consensus        76 t~~y~aPE~l~~~~~~~~~Diws~G~~l~~l~~-g~~pf~~~~~~~~  121 (252)
                      |+.|+|||++.+..++.++||||+||++|++++ |..||.+....+.
T Consensus       222 ~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~  268 (334)
T 2pvf_A          222 PVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEEL  268 (334)
T ss_dssp             CGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHH
T ss_pred             ccceeChHHhcCCCcChHHHHHHHHHHHHHHHhCCCCCcCcCCHHHH
Confidence            778999999998889999999999999999999 9999987654443

>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*

Probab=99.94  E-value=1.5e-27  Score=197.58  Aligned_cols=98  Identities=24%  Similarity=0.307  Sum_probs=72.5

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCCCccccCCCcc
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYR   80 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~~~~~~t~~y~   80 (252)
                      ||+|||++||+||||||+|||++.++.+++.|||++........                      ........+|+.|+
T Consensus       176 ~l~~lH~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~----------------------~~~~~~~~~~~~y~  233 (333)
T 2i1m_A          176 GMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSN----------------------YIVKGNARLPVKWM  233 (333)
T ss_dssp             HHHHHHHTTEECSCCSGGGCEEEGGGEEEBCCCGGGCCGGGCTT----------------------SEECSSCEECGGGS
T ss_pred             HHHHHhcCCcccCCcccceEEECCCCeEEECccccccccccccc----------------------eeecCCCCCCcccc
Confidence            68999999999999999999997766555555554432111000                      00011234677899


Q ss_pred             cchhhhcCCCCccchhHhHHHHHHHHHh-CCCCCCCCChHH
Q 025467           81 APEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHENLE  120 (252)
Q Consensus        81 aPE~l~~~~~~~~~Diws~G~~l~~l~~-g~~pf~~~~~~~  120 (252)
                      |||++.+..++.++||||+||++|+|++ |..||.+.....
T Consensus       234 aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~  274 (333)
T 2i1m_A          234 APESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNS  274 (333)
T ss_dssp             CHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCSSH
T ss_pred             CHHHhccCCCChHHHHHHHHHHHHHHHcCCCCCCcccchhH
Confidence            9999998899999999999999999998 999998755433

>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*

Probab=99.94  E-value=1.3e-26  Score=186.16  Aligned_cols=93  Identities=20%  Similarity=0.216  Sum_probs=72.5

Q ss_pred             ChhhhhccC--ccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCCCccccCCC
Q 025467            1 MFAVMHDLC--MIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRH   78 (252)
Q Consensus         1 aL~~lH~~~--ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~~~~~~t~~   78 (252)
                      ||+|||++|  |+||||||+||+++.                           .+.+++.|||.+......  ...||+.
T Consensus       123 ~l~~lH~~~~~i~H~dikp~Nil~~~---------------------------~~~~~l~~~~~~~~~~~~--~~~~t~~  173 (271)
T 3kmu_A          123 GMAFLHTLEPLIPRHALNSRSVMIDE---------------------------DMTARISMADVKFSFQSP--GRMYAPA  173 (271)
T ss_dssp             HHHHHTTSSSCCTTCCCSGGGEEECT---------------------------TSCEEEEGGGSCCTTSCT--TCBSCGG
T ss_pred             HHHHHhcCCCceecCCCccceEEEcC---------------------------CcceeEEeccceeeeccc--CccCCcc
Confidence            689999999  999999999999944                           344666666654432222  2367899


Q ss_pred             cccchhhhcCCCCc---cchhHhHHHHHHHHHhCCCCCCCCChHHHH
Q 025467           79 YRAPEVILGLGWTY---PCDIWSVGCILVELCTGEALFQTHENLEHL  122 (252)
Q Consensus        79 y~aPE~l~~~~~~~---~~Diws~G~~l~~l~~g~~pf~~~~~~~~~  122 (252)
                      |+|||++.+..++.   ++||||+||++|++++|..||.+.......
T Consensus       174 y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~  220 (271)
T 3kmu_A          174 WVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFADLSNMEIG  220 (271)
T ss_dssp             GSCHHHHHSCGGGSCHHHHHHHHHHHHHHHHHHCSCTTTTSCHHHHH
T ss_pred             ccChhhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCccccChHHHH
Confidence            99999998765443   799999999999999999999876655443

>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...

Probab=99.94  E-value=4.7e-27  Score=190.70  Aligned_cols=93  Identities=24%  Similarity=0.371  Sum_probs=74.0

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCCC----ccccC
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQN----YIVST   76 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~~----~~~~t   76 (252)
                      ||+|||++||+||||||+||+++.++                           .++|+|||.+........    ...+|
T Consensus       123 ~l~~lH~~~i~H~dikp~Nil~~~~~---------------------------~~~l~Dfg~~~~~~~~~~~~~~~~~~~  175 (288)
T 3kfa_A          123 AMEYLEKKNFIHRDLAARNCLVGENH---------------------------LVKVADFGLSRLMTGDTYTAHAGAKFP  175 (288)
T ss_dssp             HHHHHHHHTCCCSCCSGGGEEECGGG---------------------------CEEECCCCGGGTSCSSSSEEETTEEEC
T ss_pred             HHHHHHHCCccCCCCCcceEEEcCCC---------------------------CEEEccCccceeccCCccccccCCccc
Confidence            58999999999999999999995544                           466677776654332221    12457


Q ss_pred             CCcccchhhhcCCCCccchhHhHHHHHHHHHh-CCCCCCCCChHH
Q 025467           77 RHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHENLE  120 (252)
Q Consensus        77 ~~y~aPE~l~~~~~~~~~Diws~G~~l~~l~~-g~~pf~~~~~~~  120 (252)
                      +.|+|||++.+..++.++||||+||++|++++ |..||.+.+...
T Consensus       176 ~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~~g~~p~~~~~~~~  220 (288)
T 3kfa_A          176 IKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ  220 (288)
T ss_dssp             GGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGG
T ss_pred             cCcCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHH
Confidence            78999999998899999999999999999999 999997765433

>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*

Probab=99.94  E-value=3e-27  Score=192.09  Aligned_cols=96  Identities=23%  Similarity=0.328  Sum_probs=73.8

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCC------Cccc
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ------NYIV   74 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~------~~~~   74 (252)
                      ||+|||++||+||||||+||+++.++                           .++|+|||.+.......      ....
T Consensus       133 ~l~~lH~~~i~H~dikp~Nili~~~~---------------------------~~kl~Dfg~~~~~~~~~~~~~~~~~~~  185 (291)
T 1u46_A          133 GMGYLESKRFIHRDLAARNLLLATRD---------------------------LVKIGDFGLMRALPQNDDHYVMQEHRK  185 (291)
T ss_dssp             HHHHHHHTTEECSCCCGGGEEEEETT---------------------------EEEECCCTTCEECCC-CCEEEC-----
T ss_pred             HHHHHHhCCcccCCCchheEEEcCCC---------------------------CEEEccccccccccccccchhhhccCC
Confidence            68999999999999999999996554                           45666666654432221      1235


Q ss_pred             cCCCcccchhhhcCCCCccchhHhHHHHHHHHHh-CCCCCCCCChHHHHH
Q 025467           75 STRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHENLEHLA  123 (252)
Q Consensus        75 ~t~~y~aPE~l~~~~~~~~~Diws~G~~l~~l~~-g~~pf~~~~~~~~~~  123 (252)
                      +|..|+|||++.+..++.++||||+||++|++++ |..||.+.+......
T Consensus       186 ~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~  235 (291)
T 1u46_A          186 VPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILH  235 (291)
T ss_dssp             CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHH
T ss_pred             CCceeeCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCcccCCHHHHHH
Confidence            6778999999998888999999999999999999 999998776544433

>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=99.94  E-value=7.4e-27  Score=187.46  Aligned_cols=95  Identities=28%  Similarity=0.490  Sum_probs=75.0

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCC----CCccccC
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD----QNYIVST   76 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~----~~~~~~t   76 (252)
                      ||+|||++||+||||||+||+++.++                           .++|+|||.+......    .....++
T Consensus       116 ~l~~lH~~~i~H~dl~p~Nili~~~~---------------------------~~kl~dfg~~~~~~~~~~~~~~~~~~~  168 (267)
T 3t9t_A          116 GMAYLEEACVIHRDLAARNCLVGENQ---------------------------VIKVSDFGMTRFVLDDQYTSSTGTKFP  168 (267)
T ss_dssp             HHHHHHHTTCCCSSCCGGGEEECGGG---------------------------CEEECCTTGGGGBCCHHHHSTTSTTCC
T ss_pred             HHHHHHhCCcccCCCchheEEECCCC---------------------------CEEEccccccccccccccccccccccc
Confidence            68999999999999999999995443                           4677777766543221    1123567


Q ss_pred             CCcccchhhhcCCCCccchhHhHHHHHHHHHh-CCCCCCCCChHHHH
Q 025467           77 RHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHENLEHL  122 (252)
Q Consensus        77 ~~y~aPE~l~~~~~~~~~Diws~G~~l~~l~~-g~~pf~~~~~~~~~  122 (252)
                      ..|+|||++.+..++.++||||+||++|++++ |..||.........
T Consensus       169 ~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~  215 (267)
T 3t9t_A          169 VKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVV  215 (267)
T ss_dssp             GGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHH
T ss_pred             ccccChhhhcCCCccchhchhhhHHHHHHHhccCCCCCCCCCHHHHH
Confidence            78999999998889999999999999999999 89999876654433

>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...

Probab=99.94  E-value=5.5e-27  Score=191.31  Aligned_cols=92  Identities=24%  Similarity=0.321  Sum_probs=70.0

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCC-------CCcc
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD-------QNYI   73 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~-------~~~~   73 (252)
                      ||+|||++||+||||||+||+++.++.                           ++|+|||.+......       ....
T Consensus       140 ~l~~lH~~~i~H~dikp~Nil~~~~~~---------------------------~kl~Dfg~a~~~~~~~~~~~~~~~~~  192 (298)
T 3f66_A          140 GMKYLASKKFVHRDLAARNCMLDEKFT---------------------------VKVADFGLARDMYDKEYYSVHNKTGA  192 (298)
T ss_dssp             HHHHHHHTTCCCSCCSGGGEEECTTCC---------------------------EEECSCGGGCCCSCGGGCBC-----C
T ss_pred             HHHHHHhCCccCCCCchheEEECCCCC---------------------------EEECcccccccccccchhccccccCC
Confidence            689999999999999999999955444                           555555555432111       1123


Q ss_pred             ccCCCcccchhhhcCCCCccchhHhHHHHHHHHHh-CCCCCCCCChH
Q 025467           74 VSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHENL  119 (252)
Q Consensus        74 ~~t~~y~aPE~l~~~~~~~~~Diws~G~~l~~l~~-g~~pf~~~~~~  119 (252)
                      .+|+.|+|||.+.+..++.++||||+||++|++++ +.+||.+.+..
T Consensus       193 ~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~~~  239 (298)
T 3f66_A          193 KLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTF  239 (298)
T ss_dssp             CBCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTSCTT
T ss_pred             CCCccccChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCccCCHH
Confidence            56778999999999899999999999999999999 56777655443

>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...

Probab=99.94  E-value=7.4e-27  Score=188.79  Aligned_cols=95  Identities=27%  Similarity=0.421  Sum_probs=75.2

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCC----CccccC
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ----NYIVST   76 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~----~~~~~t   76 (252)
                      ||+|||++||+||||||+||+++.                           .+.++|+|||.+.......    ....++
T Consensus       121 ~l~~lH~~~i~H~dikp~Nil~~~---------------------------~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~  173 (279)
T 1qpc_A          121 GMAFIEERNYIHRDLRAANILVSD---------------------------TLSCKIADFGLARLIEDNEYTAREGAKFP  173 (279)
T ss_dssp             HHHHHHHTTEECSCCSGGGEEECT---------------------------TSCEEECCCTTCEECSSSCEECCTTCCCC
T ss_pred             HHHHHHHCCeeccCCCHhhEEEcC---------------------------CCCEEECCCcccccccCcccccccCCCCc
Confidence            689999999999999999999954                           3456777777665433221    123457


Q ss_pred             CCcccchhhhcCCCCccchhHhHHHHHHHHHh-CCCCCCCCChHHHH
Q 025467           77 RHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHENLEHL  122 (252)
Q Consensus        77 ~~y~aPE~l~~~~~~~~~Diws~G~~l~~l~~-g~~pf~~~~~~~~~  122 (252)
                      ..|+|||++.+..++.++||||+||++++|++ |..||.+.+..+..
T Consensus       174 ~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~  220 (279)
T 1qpc_A          174 IKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVI  220 (279)
T ss_dssp             TTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHH
T ss_pred             cCccChhhhccCCCCchhhhHHHHHHHHHHHhCCCCCCcccCHHHHH
Confidence            78999999998889999999999999999999 89999876654433

>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*

Probab=99.94  E-value=3.7e-27  Score=198.75  Aligned_cols=93  Identities=25%  Similarity=0.424  Sum_probs=72.4

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCC-----Ccccc
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ-----NYIVS   75 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~-----~~~~~   75 (252)
                      ||+|||++||+||||||+|||++.++                           .+||+|||++.......     ....+
T Consensus       225 ~l~~LH~~~ivHrDlkp~Nil~~~~~---------------------------~~kl~DfG~s~~~~~~~~~~~~~~~~~  277 (377)
T 3cbl_A          225 GMEYLESKCCIHRDLAARNCLVTEKN---------------------------VLKISDFGMSREEADGVYAASGGLRQV  277 (377)
T ss_dssp             HHHHHHHTTEECSCCSGGGEEECTTC---------------------------CEEECCGGGCEECTTSEEECCSSCCEE
T ss_pred             HHHHHHHCCcCCcccCHHHEEEcCCC---------------------------cEEECcCCCceecCCCceeecCCCCCC
Confidence            68999999999999999999995544                           45666666554322211     11234


Q ss_pred             CCCcccchhhhcCCCCccchhHhHHHHHHHHHh-CCCCCCCCChHH
Q 025467           76 TRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHENLE  120 (252)
Q Consensus        76 t~~y~aPE~l~~~~~~~~~Diws~G~~l~~l~~-g~~pf~~~~~~~  120 (252)
                      +..|+|||++.+..++.++||||+||++|++++ |..||.+.....
T Consensus       278 ~~~y~aPE~~~~~~~~~~~DvwslG~il~el~t~g~~p~~~~~~~~  323 (377)
T 3cbl_A          278 PVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSNQQ  323 (377)
T ss_dssp             EGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCSSTTSCHHH
T ss_pred             CcCcCCHhHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHH
Confidence            667999999998889999999999999999998 999998766543

>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}

Probab=99.93  E-value=8.2e-28  Score=199.42  Aligned_cols=87  Identities=26%  Similarity=0.314  Sum_probs=66.8

Q ss_pred             Chhhhhcc---------CccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCC--
Q 025467            1 MFAVMHDL---------CMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD--   69 (252)
Q Consensus         1 aL~~lH~~---------~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~--   69 (252)
                      ||+|||+.         ||+||||||+|||++.++                           .++|+|||++......  
T Consensus       123 ~L~~LH~~~~~~~~~~~~ivH~Dikp~Nill~~~~---------------------------~~kL~DFG~a~~~~~~~~  175 (336)
T 3g2f_A          123 GLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDG---------------------------TCVISDFGLSMRLTGNRL  175 (336)
T ss_dssp             HHHHHHCCBCCGGGCBCCEECSSCSGGGEEECTTS---------------------------CEEECCCTTCEECSSSSC
T ss_pred             HHHHHHhhhccccccccceeecccccceEEEcCCC---------------------------cEEEeeccceeecccccc
Confidence            68999999         999999999999995544                           4566666666432211  


Q ss_pred             ---------CCccccCCCcccchhhhc-------CCCCccchhHhHHHHHHHHHhCCCCCC
Q 025467           70 ---------QNYIVSTRHYRAPEVILG-------LGWTYPCDIWSVGCILVELCTGEALFQ  114 (252)
Q Consensus        70 ---------~~~~~~t~~y~aPE~l~~-------~~~~~~~Diws~G~~l~~l~~g~~pf~  114 (252)
                               .....||+.|+|||++.+       ..++.++||||+||++|+|++|..||.
T Consensus       176 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~  236 (336)
T 3g2f_A          176 VRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLF  236 (336)
T ss_dssp             C---------CCTTSCGGGCCHHHHTTCCCGGGHHHHHHHHHHHHHHHHHHHHHTTBGGGS
T ss_pred             cCccccccccccCCCccceeCchhhcCCcccccccccccccchHHHHHHHHHHHhcCCcCC
Confidence                     112468999999999986       345678999999999999999976653

>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*

Probab=99.93  E-value=7.6e-27  Score=189.95  Aligned_cols=94  Identities=28%  Similarity=0.442  Sum_probs=73.2

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCC------Cccc
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ------NYIV   74 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~------~~~~   74 (252)
                      ||+|||++||+||||||+||+++.++.                           ++|+|||.+.......      ....
T Consensus       129 ~l~~LH~~~i~H~dikp~Nil~~~~~~---------------------------~kl~Dfg~~~~~~~~~~~~~~~~~~~  181 (291)
T 1xbb_A          129 GMKYLEESNFVHRDLAARNVLLVTQHY---------------------------AKISDFGLSKALRADENYYKAQTHGK  181 (291)
T ss_dssp             HHHHHHHTTEECSCCSGGGEEEEETTE---------------------------EEECCCTTCEECCTTCSEEEC----C
T ss_pred             HHHHHHhCCeEcCCCCcceEEEeCCCc---------------------------EEEccCCcceeeccCCCcccccccCC
Confidence            689999999999999999999966554                           5566666554332221      1124


Q ss_pred             cCCCcccchhhhcCCCCccchhHhHHHHHHHHHh-CCCCCCCCChHHH
Q 025467           75 STRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHENLEH  121 (252)
Q Consensus        75 ~t~~y~aPE~l~~~~~~~~~Diws~G~~l~~l~~-g~~pf~~~~~~~~  121 (252)
                      +++.|+|||.+.+..++.++||||+||++|++++ |..||.+.+....
T Consensus       182 ~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~  229 (291)
T 1xbb_A          182 WPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEV  229 (291)
T ss_dssp             CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHH
T ss_pred             CCceeeChHHhccCCCChhhhHHHHHHHHHHHHhcCCCCCCCCCHHHH
Confidence            5678999999998888999999999999999999 9999987665443

>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...

Probab=99.93  E-value=1.9e-26  Score=187.93  Aligned_cols=88  Identities=27%  Similarity=0.357  Sum_probs=68.7

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCC------Cccc
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ------NYIV   74 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~------~~~~   74 (252)
                      ||+|||++||+||||||+|||++.++.                           ++|+|||.+.......      ....
T Consensus       126 ~l~~lH~~~ivH~Dikp~Nil~~~~~~---------------------------~kl~Dfg~~~~~~~~~~~~~~~~~~~  178 (295)
T 3ugc_A          126 GMEYLGTKRYIHRDLATRNILVENENR---------------------------VKIGDFGLTKVLPQDKEFFKVKEPGE  178 (295)
T ss_dssp             HHHHHHHTTCCCSCCSGGGEEEEETTE---------------------------EEECCCCSCC-------------CTT
T ss_pred             HHHHHhcCCcccCCCCHhhEEEcCCCe---------------------------EEEccCcccccccCCcceeeeccCCC
Confidence            689999999999999999999966554                           5556666554332211      1234


Q ss_pred             cCCCcccchhhhcCCCCccchhHhHHHHHHHHHhCCCCCCC
Q 025467           75 STRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQT  115 (252)
Q Consensus        75 ~t~~y~aPE~l~~~~~~~~~Diws~G~~l~~l~~g~~pf~~  115 (252)
                      ++..|+|||++.+..++.++||||+||++|++++|..|+..
T Consensus       179 ~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~  219 (295)
T 3ugc_A          179 SPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKS  219 (295)
T ss_dssp             CGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTTCTTCS
T ss_pred             CccceeCcHHhcCCCCChHHHHHHHHHHHHHHHhcccccCC
Confidence            66779999999999999999999999999999999999864

>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*

Probab=99.93  E-value=2.8e-27  Score=195.43  Aligned_cols=87  Identities=30%  Similarity=0.360  Sum_probs=72.3

Q ss_pred             Chhhhhcc---CccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCC----Ccc
Q 025467            1 MFAVMHDL---CMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ----NYI   73 (252)
Q Consensus         1 aL~~lH~~---~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~----~~~   73 (252)
                      ||+|||++   ||+||||||+|||++.                           .+.++|+|||.+.......    ...
T Consensus       143 ~l~~lH~~~~~~ivH~Dlkp~Nil~~~---------------------------~~~~kl~Dfg~~~~~~~~~~~~~~~~  195 (326)
T 3uim_A          143 GLAYLHDHCDPKIIHRDVKAANILLDE---------------------------EFEAVVGDFGLAKLMDYKDTHVTTAV  195 (326)
T ss_dssp             HHHHHHHSSSSCEECCCCSGGGEEECT---------------------------TCCEEECCCSSCEECCSSSSCEECCC
T ss_pred             HHHHHHhCCCCCeEeCCCchhhEEECC---------------------------CCCEEeccCccccccCcccccccccc
Confidence            68999999   9999999999999944                           4457777777776433221    123


Q ss_pred             ccCCCcccchhhhcCCCCccchhHhHHHHHHHHHhCCCCCC
Q 025467           74 VSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQ  114 (252)
Q Consensus        74 ~~t~~y~aPE~l~~~~~~~~~Diws~G~~l~~l~~g~~pf~  114 (252)
                      .||+.|+|||++.+..++.++||||+||++|+|++|..||.
T Consensus       196 ~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~  236 (326)
T 3uim_A          196 RGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFD  236 (326)
T ss_dssp             CSCGGGCCHHHHHHSEECHHHHHHHHHHHHHHHHHCCCSBC
T ss_pred             cCCcCccCHHHhccCCCCccccchhHHHHHHHHHhCCCccc
Confidence            58999999999988889999999999999999999999995

>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*

Probab=99.93  E-value=6.2e-27  Score=209.27  Aligned_cols=97  Identities=28%  Similarity=0.413  Sum_probs=74.4

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCC------Cccc
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ------NYIV   74 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~------~~~~   74 (252)
                      ||+|||++||+||||||+|||++.++                           .+||+|||+++......      ....
T Consensus       481 ~L~yLH~~~iiHrDLkp~NILl~~~~---------------------------~~kL~DFGla~~~~~~~~~~~~~~~~~  533 (635)
T 4fl3_A          481 GMKYLEESNFVHRDLAARNVLLVTQH---------------------------YAKISDFGLSKALRADENYYKAQTHGK  533 (635)
T ss_dssp             HHHHHHHTTCCCSCCSGGGEEEEETT---------------------------EEEECCTTHHHHTTC------------
T ss_pred             HHHHHHHCCEeCCCCChHhEEEeCCC---------------------------CEEEEEcCCccccccCccccccccCCC
Confidence            68999999999999999999996554                           45666666654332211      1124


Q ss_pred             cCCCcccchhhhcCCCCccchhHhHHHHHHHHHh-CCCCCCCCChHHHHHH
Q 025467           75 STRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHENLEHLAM  124 (252)
Q Consensus        75 ~t~~y~aPE~l~~~~~~~~~Diws~G~~l~~l~~-g~~pf~~~~~~~~~~~  124 (252)
                      +|+.|+|||++.+..++.++||||+||++|+|++ |..||.+.+..+....
T Consensus       534 ~t~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~~~~~~  584 (635)
T 4fl3_A          534 WPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAM  584 (635)
T ss_dssp             -CGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHH
T ss_pred             CceeeeChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHH
Confidence            5778999999999899999999999999999998 9999988776554443

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A

Probab=99.93  E-value=5.2e-27  Score=204.42  Aligned_cols=93  Identities=23%  Similarity=0.366  Sum_probs=73.6

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCC----CccccC
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ----NYIVST   76 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~----~~~~~t   76 (252)
                      ||+|||++||+||||||+|||++.++                           .+||+|||+++......    ....++
T Consensus       330 ~L~~LH~~~ivHrDlkp~NIll~~~~---------------------------~~kl~DFG~a~~~~~~~~~~~~~~~~~  382 (495)
T 1opk_A          330 AMEYLEKKNFIHRNLAARNCLVGENH---------------------------LVKVADFGLSRLMTGDTYTAHAGAKFP  382 (495)
T ss_dssp             HHHHHHHTTEECSCCSGGGEEECGGG---------------------------CEEECCTTCEECCTTCCEECCTTCCCC
T ss_pred             HHHHHHhCCcccCCCChhhEEECCCC---------------------------cEEEeecccceeccCCceeecCCCcCC
Confidence            68999999999999999999995544                           46666666665432211    112456


Q ss_pred             CCcccchhhhcCCCCccchhHhHHHHHHHHHh-CCCCCCCCChHH
Q 025467           77 RHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHENLE  120 (252)
Q Consensus        77 ~~y~aPE~l~~~~~~~~~Diws~G~~l~~l~~-g~~pf~~~~~~~  120 (252)
                      ..|+|||++.+..++.++|||||||++|+|++ |..||.+.+...
T Consensus       383 ~~y~aPE~~~~~~~~~~sDvwSlG~~l~el~t~g~~p~~~~~~~~  427 (495)
T 1opk_A          383 IKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ  427 (495)
T ss_dssp             GGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCGGG
T ss_pred             cceeCHhHHhcCCCCcHHhHHhHHHHHHHHHhCCCCCCCCCCHHH
Confidence            78999999998889999999999999999999 999998765443

>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}

Probab=99.93  E-value=1.3e-26  Score=206.51  Aligned_cols=96  Identities=26%  Similarity=0.389  Sum_probs=73.2

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCC------Cccc
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ------NYIV   74 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~------~~~~   74 (252)
                      ||+|||++||+||||||+|||++.++.                           +||+|||+++......      ....
T Consensus       448 ~L~~LH~~~iiHrDlkp~NILl~~~~~---------------------------vkL~DFGla~~~~~~~~~~~~~~~~~  500 (613)
T 2ozo_A          448 GMKYLEEKNFVHRNLAARNVLLVNRHY---------------------------AKISDFGLSKALGADDSYYTARSAGK  500 (613)
T ss_dssp             HHHHHHHTTCCCSCCSGGGEEEEETTE---------------------------EEECCCSTTTTCC-------------
T ss_pred             HHHHHHHCCEEcCcCCHHHEEEcCCCc---------------------------EEEeeccCcccccCCCceeeeccCCC
Confidence            689999999999999999999966554                           5555555554332211      1124


Q ss_pred             cCCCcccchhhhcCCCCccchhHhHHHHHHHHHh-CCCCCCCCChHHHHH
Q 025467           75 STRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHENLEHLA  123 (252)
Q Consensus        75 ~t~~y~aPE~l~~~~~~~~~Diws~G~~l~~l~~-g~~pf~~~~~~~~~~  123 (252)
                      +++.|+|||++.+..++.++|||||||++|+|++ |..||.+.+..+...
T Consensus       501 ~~~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~~~~~  550 (613)
T 2ozo_A          501 WPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMA  550 (613)
T ss_dssp             -CCTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCSHHHHH
T ss_pred             CccceeCHhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHH
Confidence            5678999999998899999999999999999998 999998876655443

>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*

Probab=99.93  E-value=1.7e-27  Score=197.01  Aligned_cols=88  Identities=26%  Similarity=0.321  Sum_probs=70.4

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCC------Cccc
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ------NYIV   74 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~------~~~~   74 (252)
                      ||+|||++||+||||||+|||++.++.                           ++|+|||.+.......      ....
T Consensus       139 al~~lH~~~ivH~Dikp~NIl~~~~~~---------------------------~kl~Dfg~~~~~~~~~~~~~~~~~~~  191 (327)
T 3lxl_A          139 GMEYLGSRRCVHRDLAARNILVESEAH---------------------------VKIADFGLAKLLPLDKDYYVVREPGQ  191 (327)
T ss_dssp             HHHHHHHTTEECSCCSGGGEEEEETTE---------------------------EEECCGGGCEECCTTCSEEECSSCCC
T ss_pred             HHHHHHhCCccCCCCChhhEEECCCCC---------------------------EEEcccccceecccCCccceeeccCC
Confidence            689999999999999999999966554                           4555555554322211      1235


Q ss_pred             cCCCcccchhhhcCCCCccchhHhHHHHHHHHHhCCCCCCC
Q 025467           75 STRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQT  115 (252)
Q Consensus        75 ~t~~y~aPE~l~~~~~~~~~Diws~G~~l~~l~~g~~pf~~  115 (252)
                      +|..|+|||++.+..++.++||||+||++|++++|..||..
T Consensus       192 ~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~  232 (327)
T 3lxl_A          192 SPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCS  232 (327)
T ss_dssp             SCGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGS
T ss_pred             ccccccCHHHhccCCCChHHhHHHHHHHHHHHHhCCCCCcc
Confidence            67789999999988899999999999999999999999864

>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7

Probab=99.93  E-value=2.5e-26  Score=190.43  Aligned_cols=86  Identities=27%  Similarity=0.307  Sum_probs=66.0

Q ss_pred             Chhhhhcc--------CccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCC--
Q 025467            1 MFAVMHDL--------CMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ--   70 (252)
Q Consensus         1 aL~~lH~~--------~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~--   70 (252)
                      ||+|||++        ||+||||||+|||++.+                           +.++|+|||.+.......  
T Consensus       146 ~l~~lH~~~~~~~~~~~ivH~Dikp~Nill~~~---------------------------~~~kl~Dfg~a~~~~~~~~~  198 (337)
T 3mdy_A          146 GLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKN---------------------------GTCCIADLGLAVKFISDTNE  198 (337)
T ss_dssp             HHHHHHSCBCSTTCBCCEECSCCCGGGEEECTT---------------------------SCEEECCCTTCEECC-----
T ss_pred             HHHHHHHhhhhhccCCCEEecccchHHEEECCC---------------------------CCEEEEeCCCceeecccccc
Confidence            68999998        99999999999999544                           456777777664332211  


Q ss_pred             -----CccccCCCcccchhhhcCCCCcc------chhHhHHHHHHHHHhCCCCC
Q 025467           71 -----NYIVSTRHYRAPEVILGLGWTYP------CDIWSVGCILVELCTGEALF  113 (252)
Q Consensus        71 -----~~~~~t~~y~aPE~l~~~~~~~~------~Diws~G~~l~~l~~g~~pf  113 (252)
                           ....||+.|+|||++.+..+...      +||||+||++|+|++|..|+
T Consensus       199 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~~~  252 (337)
T 3mdy_A          199 VDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVARRCVSG  252 (337)
T ss_dssp             ----CCSSCSCGGGCCHHHHTTCCCTTCTHHHHHHHHHHHHHHHHHHHTTBCBT
T ss_pred             ccCCCCCCccCcceeChhhcccccCCccccCccccchHHHHHHHHHHHhccCcc
Confidence                 13478999999999987766554      89999999999999994443

>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*

Probab=99.93  E-value=5.3e-27  Score=192.18  Aligned_cols=90  Identities=33%  Similarity=0.482  Sum_probs=71.6

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCC-----CCcccc
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD-----QNYIVS   75 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~-----~~~~~~   75 (252)
                      ||+|||++||+||||||+||+++.                           .+.++|+|||.+......     .....|
T Consensus       145 ~l~~lH~~~i~H~dlkp~Nili~~---------------------------~~~~kl~Dfg~~~~~~~~~~~~~~~~~~g  197 (307)
T 2nru_A          145 GINFLHENHHIHRDIKSANILLDE---------------------------AFTAKISDFGLARASEKFAQTVMTSRIVG  197 (307)
T ss_dssp             HHHHHHHTTEECSCCCGGGEEECT---------------------------TCCEEECCCTTCEECCSCSSCEECSSCCS
T ss_pred             HHHHHhcCCeecCCCCHHHEEEcC---------------------------CCcEEEeecccccccccccccccccccCC
Confidence            589999999999999999999954                           345677777766543321     122468


Q ss_pred             CCCcccchhhhcCCCCccchhHhHHHHHHHHHhCCCCCCCCCh
Q 025467           76 TRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHEN  118 (252)
Q Consensus        76 t~~y~aPE~l~~~~~~~~~Diws~G~~l~~l~~g~~pf~~~~~  118 (252)
                      |+.|+|||.+.+ .++.++||||+||++|++++|..||.....
T Consensus       198 ~~~y~aPE~~~~-~~~~~~Dv~slG~il~~l~~g~~p~~~~~~  239 (307)
T 2nru_A          198 TTAYMAPEALRG-EITPKSDIYSFGVVLLEIITGLPAVDEHRE  239 (307)
T ss_dssp             CGGGCCHHHHTT-EECTHHHHHHHHHHHHHHHHCCCSBCTTBS
T ss_pred             CcCcCChHHhcC-CCCccchhHHHHHHHHHHHHCCCCcccCcc
Confidence            899999998865 578899999999999999999999976543

>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*

Probab=99.93  E-value=9.3e-27  Score=188.43  Aligned_cols=86  Identities=30%  Similarity=0.431  Sum_probs=71.0

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCC--CCccccCCC
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD--QNYIVSTRH   78 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~--~~~~~~t~~   78 (252)
                      ||+|||++||+||||||+||+++.++                           .++|+|||.+......  .....|++.
T Consensus       134 ~l~~lH~~~i~H~dlkp~Nil~~~~~---------------------------~~kl~Dfg~~~~~~~~~~~~~~~~~~~  186 (284)
T 2a19_B          134 GVDYIHSKKLINRDLKPSNIFLVDTK---------------------------QVKIGDFGLVTSLKNDGKRTRSKGTLR  186 (284)
T ss_dssp             HHHHHHHTTEECSCCSGGGEEEEETT---------------------------EEEECCCTTCEESSCCSCCCCCCSCCT
T ss_pred             HHHHHHhCCeeeccCCHHHEEEcCCC---------------------------CEEECcchhheeccccccccccCCccc
Confidence            68999999999999999999996544                           4677777766543322  223468899


Q ss_pred             cccchhhhcCCCCccchhHhHHHHHHHHHhCCCCC
Q 025467           79 YRAPEVILGLGWTYPCDIWSVGCILVELCTGEALF  113 (252)
Q Consensus        79 y~aPE~l~~~~~~~~~Diws~G~~l~~l~~g~~pf  113 (252)
                      |+|||++.+..++.++||||+||++|+|++|..|+
T Consensus       187 y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~  221 (284)
T 2a19_B          187 YMSPEQISSQDYGKEVDLYALGLILAELLHVCDTA  221 (284)
T ss_dssp             TSCHHHHHCSCCCTHHHHHHHHHHHHHHHSCCSSH
T ss_pred             ccChhhhccCCCcchhhhHHHHHHHHHHHhcCCcc
Confidence            99999999888999999999999999999998876

>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7

Probab=99.93  E-value=2.4e-26  Score=202.00  Aligned_cols=144  Identities=27%  Similarity=0.366  Sum_probs=107.4

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCC----CCccccC
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD----QNYIVST   76 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~----~~~~~~t   76 (252)
                      ||+|||++||+||||||+|||++.++                           .+||+|||+++.....    .....++
T Consensus       375 ~L~~LH~~~ivHrDlkp~NIll~~~~---------------------------~~kl~DFG~a~~~~~~~~~~~~~~~~~  427 (535)
T 2h8h_A          375 GMAYVERMNYVHRDLRAANILVGENL---------------------------VCKVADFGLARLIEDNEYTARQGAKFP  427 (535)
T ss_dssp             HHHHHHHTTCCCSCCSGGGEEECGGG---------------------------CEEECCTTSTTTCCCHHHHTTCSTTSC
T ss_pred             HHHHHHhCCeeCCCCCHhhEEEcCCC---------------------------cEEEcccccceecCCCceecccCCcCc
Confidence            68999999999999999999995443                           4667777766543221    1122456


Q ss_pred             CCcccchhhhcCCCCccchhHhHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHHHHHHhhcCCCCC
Q 025467           77 RHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDW  155 (252)
Q Consensus        77 ~~y~aPE~l~~~~~~~~~Diws~G~~l~~l~~-g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~  155 (252)
                      ..|+|||++.+..++.++|||||||++|+|++ |..||.+....+.+..+....                      ....
T Consensus       428 ~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t~g~~P~~~~~~~~~~~~i~~~~----------------------~~~~  485 (535)
T 2h8h_A          428 IKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGY----------------------RMPC  485 (535)
T ss_dssp             GGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTTCCSSTTCCHHHHHHHHHTTC----------------------CCCC
T ss_pred             ccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCC----------------------CCCC
Confidence            78999999998899999999999999999999 999998776655443322110                      0000


Q ss_pred             CccccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCCCCC
Q 025467          156 PEGAASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLT  235 (252)
Q Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~t  235 (252)
                                                                             ....+..+.+||.+||+.||++|||
T Consensus       486 -------------------------------------------------------~~~~~~~l~~li~~cl~~dP~~RPt  510 (535)
T 2h8h_A          486 -------------------------------------------------------PPECPESLHDLMCQCWRKEPEERPT  510 (535)
T ss_dssp             -------------------------------------------------------CTTCCHHHHHHHHHHTCSSGGGSCC
T ss_pred             -------------------------------------------------------CCCCCHHHHHHHHHHcCCChhHCcC
Confidence                                                                   1224568899999999999999999


Q ss_pred             HHHHHcC--CCCCCc
Q 025467          236 AREALRH--PFFTRD  248 (252)
Q Consensus       236 a~e~l~h--pwf~~~  248 (252)
                      ++++++.  .+|...
T Consensus       511 ~~~l~~~L~~~~~~~  525 (535)
T 2h8h_A          511 FEYLQAFLEDYFTST  525 (535)
T ss_dssp             HHHHHHHHHTSSCCC
T ss_pred             HHHHHHHHHHHhhcc
Confidence            9999874  565543

>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}

Probab=99.93  E-value=8e-28  Score=204.09  Aligned_cols=93  Identities=24%  Similarity=0.432  Sum_probs=74.0

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCC--CccccCCC
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ--NYIVSTRH   78 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~--~~~~~t~~   78 (252)
                      ||+|||++||+||||||+|||+....                       +....++|+|||.+.......  ....||+.
T Consensus       124 aL~~LH~~~ivH~Dlkp~NIll~~~~-----------------------~~~~~~kL~DFG~a~~~~~~~~~~~~~gt~~  180 (396)
T 4eut_A          124 GMNHLRENGIVHRNIKPGNIMRVIGE-----------------------DGQSVYKLTDFGAARELEDDEQFVSLYGTEE  180 (396)
T ss_dssp             HHHHHHHTTEECCCCCGGGEEEEECT-----------------------TSCEEEEECCGGGCEECCCGGGSSCSSSCCT
T ss_pred             HHHHHHHCCEEECCcCHHHEEEeecC-----------------------CCceeEEEecCCCceEccCCCccccccCCcc
Confidence            68999999999999999999984322                       234457888888886543322  23468999


Q ss_pred             cccchhhhc--------CCCCccchhHhHHHHHHHHHhCCCCCCCC
Q 025467           79 YRAPEVILG--------LGWTYPCDIWSVGCILVELCTGEALFQTH  116 (252)
Q Consensus        79 y~aPE~l~~--------~~~~~~~Diws~G~~l~~l~~g~~pf~~~  116 (252)
                      |+|||++.+        ..++.++||||+||++|+|++|..||...
T Consensus       181 y~aPE~~~~~~~~~~~~~~~~~~~DiwSlG~il~el~tg~~Pf~~~  226 (396)
T 4eut_A          181 YLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPF  226 (396)
T ss_dssp             TCCHHHHHHHCC--CHHHHHHHHHHHHHHHHHHHHHHHSSCSEECT
T ss_pred             ccCHHHhhccccccccccCCCcHHHHHHHHHHHHHHHHCCCCCCCC
Confidence            999999875        45678999999999999999999999653

>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*

Probab=99.93  E-value=2e-26  Score=188.20  Aligned_cols=87  Identities=29%  Similarity=0.350  Sum_probs=70.3

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCC------Cccc
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ------NYIV   74 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~------~~~~   74 (252)
                      ||+|||++||+||||||+||+++.++                           .++|+|||.+.......      ....
T Consensus       138 ~l~~lH~~~i~H~dikp~Nil~~~~~---------------------------~~kl~Dfg~~~~~~~~~~~~~~~~~~~  190 (302)
T 4e5w_A          138 GMDYLGSRQYVHRDLAARNVLVESEH---------------------------QVKIGDFGLTKAIETDKEYYTVKDDRD  190 (302)
T ss_dssp             HHHHHHHTTEECSCCSGGGEEEEETT---------------------------EEEECCCTTCEECCTTCCEEECCCCTT
T ss_pred             HHHHhhcCCcccCCCchheEEEcCCC---------------------------CEEECcccccccccCCCcceeccCCCC
Confidence            68999999999999999999996554                           45666666665433221      1235


Q ss_pred             cCCCcccchhhhcCCCCccchhHhHHHHHHHHHhCCCCCC
Q 025467           75 STRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQ  114 (252)
Q Consensus        75 ~t~~y~aPE~l~~~~~~~~~Diws~G~~l~~l~~g~~pf~  114 (252)
                      +|..|+|||++.+..++.++||||+||++|++++|..|+.
T Consensus       191 ~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~  230 (302)
T 4e5w_A          191 SPVFWYAPECLMQSKFYIASDVWSFGVTLHELLTYCDSDS  230 (302)
T ss_dssp             CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGG
T ss_pred             CCccccCCeeecCCCCCcchhHHHHHHHHHHHHHccCCCc
Confidence            7778999999998889999999999999999999998864

>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}

Probab=99.93  E-value=7.4e-26  Score=186.24  Aligned_cols=93  Identities=25%  Similarity=0.317  Sum_probs=70.1

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccC--------CCCCc
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYER--------PDQNY   72 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~--------~~~~~   72 (252)
                      ||+|||++||+||||||+||+++ ++                           .++|+|||.+....        .....
T Consensus       142 al~~lH~~~i~H~dlkp~NIl~~-~~---------------------------~~~l~Dfg~~~~~~~~~~~~~~~~~~~  193 (319)
T 2y4i_B          142 GMGYLHAKGILHKDLKSKNVFYD-NG---------------------------KVVITDFGLFSISGVLQAGRREDKLRI  193 (319)
T ss_dssp             HHHHHHHTTCCCCCCCSTTEEEC------------------------------CCEECCCSCCC----------CCSCBC
T ss_pred             HHHHHHhCCccccCCChhhEEEe-CC---------------------------CEEEeecCCcccccccccccccccccc
Confidence            68999999999999999999994 23                           35666666544321        11122


Q ss_pred             cccCCCcccchhhhc---------CCCCccchhHhHHHHHHHHHhCCCCCCCCChHHH
Q 025467           73 IVSTRHYRAPEVILG---------LGWTYPCDIWSVGCILVELCTGEALFQTHENLEH  121 (252)
Q Consensus        73 ~~~t~~y~aPE~l~~---------~~~~~~~Diws~G~~l~~l~~g~~pf~~~~~~~~  121 (252)
                      ..|++.|+|||++.+         ..++.++||||+||++|++++|..||.+......
T Consensus       194 ~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~  251 (319)
T 2y4i_B          194 QNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQPAEAI  251 (319)
T ss_dssp             CSGGGGTSCHHHHSCBSCC--CCCSCCCHHHHHHHHHHHHHHHHHSSCSSSSCCHHHH
T ss_pred             CCCcccccChHHhhhccccccccccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH
Confidence            358889999999974         3478899999999999999999999987665443

>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*

Probab=99.93  E-value=3.3e-27  Score=192.91  Aligned_cols=136  Identities=27%  Similarity=0.530  Sum_probs=94.5

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCCCccccCCCcc
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYR   80 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~~~~~~t~~y~   80 (252)
                      ||+|||++||+||||||+||+++..+                        ....++|+|||.+....             
T Consensus       129 ~l~~lH~~~i~H~dlkp~Nil~~~~~------------------------~~~~~kl~Dfg~a~~~~-------------  171 (299)
T 3m2w_A          129 AIQYLHSINIAHRDVKPENLLYTSKR------------------------PNAILKLTDFGFAKETT-------------  171 (299)
T ss_dssp             HHHHHHHTTEECCCCSGGGEEESSSS------------------------TTCCEEECCCTTCEECT-------------
T ss_pred             HHHHHHhCCcccCCCCHHHEEEecCC------------------------CCCcEEEeccccccccc-------------
Confidence            68999999999999999999995421                        24568999999875422             


Q ss_pred             cchhhhcCCCCccchhHhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHHHHHHhhcCCCCCCcccc
Q 025467           81 APEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAA  160 (252)
Q Consensus        81 aPE~l~~~~~~~~~Diws~G~~l~~l~~g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (252)
                            +..++.++||||+||++|+|++|..||.+.........+..                   ....+....     
T Consensus       172 ------~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~-------------------~~~~~~~~~-----  221 (299)
T 3m2w_A          172 ------GEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKT-------------------RIRMGQYEF-----  221 (299)
T ss_dssp             ------TCGGGGHHHHHHHHHHHHHHHHSSCSCCC-------CCSCC-------------------SSCTTCCSS-----
T ss_pred             ------cccCCchhhHHHHHHHHHHHHHCCCCCCCCcchhhhHHHHH-------------------HHhhccccC-----
Confidence                  13467899999999999999999999975433211000000                   000000000     


Q ss_pred             chhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCCCCCHHHHH
Q 025467          161 SRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREAL  240 (252)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~ta~e~l  240 (252)
                                                                    ....+...+.++.+||.+||+.||++|||++|++
T Consensus       222 ----------------------------------------------~~~~~~~~~~~~~~li~~~l~~dP~~Rps~~e~l  255 (299)
T 3m2w_A          222 ----------------------------------------------PNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFM  255 (299)
T ss_dssp             ----------------------------------------------CHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHH
T ss_pred             ----------------------------------------------CchhcccCCHHHHHHHHHHcccChhhCCCHHHHh
Confidence                                                          0011134567899999999999999999999999


Q ss_pred             cCCCCCCcc
Q 025467          241 RHPFFTRDH  249 (252)
Q Consensus       241 ~hpwf~~~~  249 (252)
                      +||||+...
T Consensus       256 ~hp~~~~~~  264 (299)
T 3m2w_A          256 NHPWIMQST  264 (299)
T ss_dssp             TSHHHHTGG
T ss_pred             cChhhcccc
Confidence            999997653

>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}

Probab=99.93  E-value=2.4e-26  Score=188.73  Aligned_cols=90  Identities=30%  Similarity=0.479  Sum_probs=65.4

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCC----CccccC
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ----NYIVST   76 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~----~~~~~t   76 (252)
                      ||+|||++||+||||||+||+++.+                           +.++|+|||.+.......    ....|+
T Consensus       146 ~l~~lH~~~i~H~dlkp~NIl~~~~---------------------------~~~kl~Dfg~~~~~~~~~~~~~~~~~~~  198 (309)
T 2h34_A          146 ALDAAHAAGATHRDVKPENILVSAD---------------------------DFAYLVDFGIASATTDEKLTQLGNTVGT  198 (309)
T ss_dssp             HHHHHHHTTCCCSCCCGGGEEECTT---------------------------SCEEECSCCC----------------CC
T ss_pred             HHHHHHHCcCCcCCCChHHEEEcCC---------------------------CCEEEecCccCccccccccccccccCCC
Confidence            5899999999999999999999544                           456667777664432211    123688


Q ss_pred             CCcccchhhhcCCCCccchhHhHHHHHHHHHhCCCCCCCCC
Q 025467           77 RHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHE  117 (252)
Q Consensus        77 ~~y~aPE~l~~~~~~~~~Diws~G~~l~~l~~g~~pf~~~~  117 (252)
                      +.|+|||++.+..++.++||||+||++|++++|..||.+..
T Consensus       199 ~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~  239 (309)
T 2h34_A          199 LYYMAPERFSESHATYRADIYALTCVLYECLTGSPPYQGDQ  239 (309)
T ss_dssp             GGGCCGGGTCC----CCCHHHHHHHHHHHHHHSSCSSCSCH
T ss_pred             cCccCHHHHcCCCCCchHhHHHHHHHHHHHHHCCCCCCCch
Confidence            89999999988889999999999999999999999998644

>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*

Probab=99.93  E-value=3.3e-26  Score=205.30  Aligned_cols=97  Identities=26%  Similarity=0.380  Sum_probs=74.8

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCC----CccccC
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ----NYIVST   76 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~----~~~~~t   76 (252)
                      ||+|||++||+||||||+|||++.++                           .++|+|||++.......    ....+|
T Consensus       503 aL~~LH~~givHrDikp~NILl~~~~---------------------------~vkL~DFG~a~~~~~~~~~~~~~~~~t  555 (656)
T 2j0j_A          503 ALAYLESKRFVHRDIAARNVLVSSND---------------------------CVKLGDFGLSRYMEDSTYYKASKGKLP  555 (656)
T ss_dssp             HHHHHHHTTCCCSCCSGGGEEEEETT---------------------------EEEECCCCCCCSCCC----------CC
T ss_pred             HHHHHHhCCccccccchHhEEEeCCC---------------------------CEEEEecCCCeecCCCcceeccCCCCC
Confidence            68999999999999999999996554                           45666666655432221    113457


Q ss_pred             CCcccchhhhcCCCCccchhHhHHHHHHHHHh-CCCCCCCCChHHHHHH
Q 025467           77 RHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHENLEHLAM  124 (252)
Q Consensus        77 ~~y~aPE~l~~~~~~~~~Diws~G~~l~~l~~-g~~pf~~~~~~~~~~~  124 (252)
                      +.|+|||++.+..++.++||||+||++|+|++ |..||.+....+.+..
T Consensus       556 ~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~~~~~~  604 (656)
T 2j0j_A          556 IKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGR  604 (656)
T ss_dssp             GGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHH
T ss_pred             cceeCHHHhcCCCCCchhhHHHHHHHHHHHHHcCCCCCCCCCHHHHHHH
Confidence            78999999998899999999999999999997 9999988776555443

>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*

Probab=99.93  E-value=4.7e-26  Score=186.81  Aligned_cols=89  Identities=30%  Similarity=0.596  Sum_probs=65.3

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCC---CccccCC
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ---NYIVSTR   77 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~---~~~~~t~   77 (252)
                      ||+|||++||+||||||+||+++.+                           +.++|+|||.+.......   ....|+.
T Consensus       148 ~l~~LH~~~i~H~dl~p~NIl~~~~---------------------------~~~kl~Dfg~~~~~~~~~~~~~~~~~~~  200 (310)
T 2wqm_A          148 ALEHMHSRRVMHRDIKPANVFITAT---------------------------GVVKLGDLGLGRFFSSKTTAAHSLVGTP  200 (310)
T ss_dssp             HHHHHHHTTCCCCCCCGGGEEECTT---------------------------SCEEECCC------------------CC
T ss_pred             HHHHHhhCCeeCCCCcHHHEEEcCC---------------------------CCEEEEeccceeeecCCCccccccCCCe
Confidence            5899999999999999999999543                           456677777665432221   2236788


Q ss_pred             CcccchhhhcCCCCccchhHhHHHHHHHHHhCCCCCCCC
Q 025467           78 HYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTH  116 (252)
Q Consensus        78 ~y~aPE~l~~~~~~~~~Diws~G~~l~~l~~g~~pf~~~  116 (252)
                      .|+|||++.+..++.++||||+||++|++++|..||.+.
T Consensus       201 ~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~  239 (310)
T 2wqm_A          201 YYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGD  239 (310)
T ss_dssp             SSCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTC--
T ss_pred             eEeChHHhCCCCCCchhhHHHHHHHHHHHHhCCCCCccc
Confidence            999999999888999999999999999999999999653

>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*

Probab=99.92  E-value=9e-27  Score=191.97  Aligned_cols=88  Identities=32%  Similarity=0.400  Sum_probs=70.9

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCC------Cccc
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ------NYIV   74 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~------~~~~   74 (252)
                      ||+|||++||+||||||+||+++.+                           +.++|+|||.+.......      ....
T Consensus       146 ~l~~LH~~~ivH~Dikp~Nil~~~~---------------------------~~~kl~Dfg~a~~~~~~~~~~~~~~~~~  198 (318)
T 3lxp_A          146 GMAYLHAQHYIHRDLAARNVLLDND---------------------------RLVKIGDFGLAKAVPEGHEYYRVREDGD  198 (318)
T ss_dssp             HHHHHHHTTEECSCCSGGGEEECTT---------------------------CCEEECCGGGCEECCTTCSEEEC---CC
T ss_pred             HHHHHHhCCccCCCCchheEEEcCC---------------------------CCEEECCccccccccccccccccccCCC
Confidence            5899999999999999999999544                           446666666665433221      1235


Q ss_pred             cCCCcccchhhhcCCCCccchhHhHHHHHHHHHhCCCCCCC
Q 025467           75 STRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQT  115 (252)
Q Consensus        75 ~t~~y~aPE~l~~~~~~~~~Diws~G~~l~~l~~g~~pf~~  115 (252)
                      +|..|+|||++.+..++.++||||+||++|++++|..||..
T Consensus       199 ~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~  239 (318)
T 3lxp_A          199 SPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQS  239 (318)
T ss_dssp             CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGS
T ss_pred             CCceeeChHHhcCCCCCcHHHHHHHHHHHHHHHhCCCcccc
Confidence            67789999999988899999999999999999999999864

>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*

Probab=99.91  E-value=1.8e-25  Score=185.65  Aligned_cols=82  Identities=27%  Similarity=0.382  Sum_probs=64.3

Q ss_pred             Chhhhh--------ccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCC---
Q 025467            1 MFAVMH--------DLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD---   69 (252)
Q Consensus         1 aL~~lH--------~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~---   69 (252)
                      ||+|||        +.||+||||||+|||++.                           .+.++|+|||.+......   
T Consensus       151 ~l~~lH~~~~~~~~~~~ivH~Dlkp~NIll~~---------------------------~~~~kL~Dfg~~~~~~~~~~~  203 (342)
T 1b6c_B          151 GLAHLHMEIVGTQGKPAIAHRDLKSKNILVKK---------------------------NGTCCIADLGLAVRHDSATDT  203 (342)
T ss_dssp             HHHHHHCCBCSTTCBCEEECSCCSGGGEEECT---------------------------TSCEEECCCTTCEEEETTTTE
T ss_pred             HHHHHHHHHhhhcccCCeeeCCCCHHHEEECC---------------------------CCCEEEEECCCceeccccccc
Confidence            588999        899999999999999954                           345677777766543222   


Q ss_pred             ----CCccccCCCcccchhhhcCC------CCccchhHhHHHHHHHHHhC
Q 025467           70 ----QNYIVSTRHYRAPEVILGLG------WTYPCDIWSVGCILVELCTG  109 (252)
Q Consensus        70 ----~~~~~~t~~y~aPE~l~~~~------~~~~~Diws~G~~l~~l~~g  109 (252)
                          .....||+.|+|||++.+..      ++.++||||+||++|+|++|
T Consensus       204 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~el~tg  253 (342)
T 1b6c_B          204 IDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARR  253 (342)
T ss_dssp             EEECCCSCCCCGGGCCHHHHTSCCCTTCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             cccccccCCcCcccCCHhhhcccccccccccCCcccHHHHHHHHHHHHhc
Confidence                12346899999999998652      33689999999999999999

>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}

Probab=99.91  E-value=4e-25  Score=182.65  Aligned_cols=88  Identities=27%  Similarity=0.357  Sum_probs=70.1

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCC------Cccc
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ------NYIV   74 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~------~~~~   74 (252)
                      ||+|||++||+||||||+||+++.++.                           ++|+|||.+.......      ....
T Consensus       157 aL~~LH~~~ivH~dikp~NIli~~~~~---------------------------~kL~Dfg~~~~~~~~~~~~~~~~~~~  209 (326)
T 2w1i_A          157 GMEYLGTKRYIHRDLATRNILVENENR---------------------------VKIGDFGLTKVLPQDKEYYKVKEPGE  209 (326)
T ss_dssp             HHHHHHHTTEECSCCCGGGEEEEETTE---------------------------EEECCCTTCEECCSSCSEEECSSCCS
T ss_pred             HHHHHHhCCEeccCCCcceEEEcCCCc---------------------------EEEecCcchhhccccccccccccCCC
Confidence            689999999999999999999966554                           5566666554432221      1234


Q ss_pred             cCCCcccchhhhcCCCCccchhHhHHHHHHHHHhCCCCCCC
Q 025467           75 STRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQT  115 (252)
Q Consensus        75 ~t~~y~aPE~l~~~~~~~~~Diws~G~~l~~l~~g~~pf~~  115 (252)
                      ++..|+|||++.+..++.++||||+||++|+|++|..|+..
T Consensus       210 ~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~tg~~~~~~  250 (326)
T 2w1i_A          210 SPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKS  250 (326)
T ss_dssp             CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHHTTCGGGS
T ss_pred             CceeEECchhhcCCCCCchhhHHHHHHHHHHHHhcCCCCCC
Confidence            66779999999988899999999999999999999998753

>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A

Probab=99.91  E-value=2.4e-26  Score=190.75  Aligned_cols=104  Identities=21%  Similarity=0.187  Sum_probs=72.7

Q ss_pred             Chhhhh-ccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCCCccccCCCc
Q 025467            1 MFAVMH-DLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHY   79 (252)
Q Consensus         1 aL~~lH-~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~~~~~~t~~y   79 (252)
                      ||+||| ++||+||||||+|||++.++... .+++...      ...........+||+|||+++.....  ..+||+.|
T Consensus       173 aL~~lH~~~~ivHrDlKp~NILl~~~~~~~-~~~~~~~------~~~~~~~~~~~vkL~DFG~a~~~~~~--~~~gt~~y  243 (336)
T 2vuw_A          173 SLAVAEASLRFEHRDLHWGNVLLKKTSLKK-LHYTLNG------KSSTIPSCGLQVSIIDYTLSRLERDG--IVVFCDVS  243 (336)
T ss_dssp             HHHHHHHHHCCBCSCCCGGGEEEEECSCSE-EEEEETT------EEEEEECTTEEEEECCCTTCBEEETT--EEECCCCT
T ss_pred             HHHHHHHhCCEeECCCCHHHEEEeccCCcc-eeeeccC------ccccccCCCceEEEeeccccEecCCC--cEEEeecc
Confidence            689999 99999999999999997654110 0000000      00000012236899999999765432  34799999


Q ss_pred             ccchhhhcCCCCccchhHhHHHH-HHHHHhCCCCCC
Q 025467           80 RAPEVILGLGWTYPCDIWSVGCI-LVELCTGEALFQ  114 (252)
Q Consensus        80 ~aPE~l~~~~~~~~~Diws~G~~-l~~l~~g~~pf~  114 (252)
                      +|||++.+.. +.++||||++++ .++++.|..||.
T Consensus       244 ~aPE~~~g~~-~~~~Diwsl~~~~~~~~~~g~~p~~  278 (336)
T 2vuw_A          244 MDEDLFTGDG-DYQFDIYRLMKKENNNRWGEYHPYS  278 (336)
T ss_dssp             TCSGGGCCCS-SHHHHHHHHHHHHHTTCTTSCCTHH
T ss_pred             cChhhhcCCC-ccceehhhhhCCCCcccccccCCCc
Confidence            9999998766 889999998777 666777888873

>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}

Probab=99.91  E-value=7e-26  Score=190.09  Aligned_cols=99  Identities=21%  Similarity=0.314  Sum_probs=75.9

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCC-----CCCcccc
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERP-----DQNYIVS   75 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~-----~~~~~~~   75 (252)
                      ||+|||++||+||||||+|||++......-                ........++|+|||++.....     .....+|
T Consensus       184 ~L~~lH~~~ivHrDiKp~NIll~~~~~~~~----------------~~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~g  247 (365)
T 3e7e_A          184 MIEQVHDCEIIHGDIKPDNFILGNGFLEQD----------------DEDDLSAGLALIDLGQSIDMKLFPKGTIFTAKCE  247 (365)
T ss_dssp             HHHHHHTTTEECCCCSGGGEEECGGGTCC----------------------CTTEEECCCTTCEEGGGSCTTEEECCSSC
T ss_pred             HHHHHhhCCeecCCCCHHHEEecccccCcc----------------ccccccCCEEEeeCchhhhhhccCCCceeeeecC
Confidence            689999999999999999999965210000                0002356789999998854321     1123578


Q ss_pred             CCCcccchhhhcCCCCccchhHhHHHHHHHHHhCCCCCCC
Q 025467           76 TRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQT  115 (252)
Q Consensus        76 t~~y~aPE~l~~~~~~~~~Diws~G~~l~~l~~g~~pf~~  115 (252)
                      |+.|+|||++.+..++.++||||+||++|+|++|..||..
T Consensus       248 t~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~  287 (365)
T 3e7e_A          248 TSGFQCVEMLSNKPWNYQIDYFGVAATVYCMLFGTYMKVK  287 (365)
T ss_dssp             TTSCCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCCCEE
T ss_pred             CCCCCChHHhcCCCCCccccHHHHHHHHHHHHhCCCcccc
Confidence            9999999999998999999999999999999999999854

>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}

Probab=99.91  E-value=7.3e-26  Score=186.19  Aligned_cols=87  Identities=30%  Similarity=0.466  Sum_probs=68.6

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCC----------
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ----------   70 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~----------   70 (252)
                      ||+|||++||+||||||+||+++.                           .+.++|+|||.+.......          
T Consensus       146 ~L~~LH~~~ivH~dlkp~NIl~~~---------------------------~~~~kl~dfg~~~~~~~~~~~~~~~~~~~  198 (317)
T 2buj_A          146 GLEAIHAKGYAHRDLKPTNILLGD---------------------------EGQPVLMDLGSMNQACIHVEGSRQALTLQ  198 (317)
T ss_dssp             HHHHHHHTTEECCCCCGGGEEECT---------------------------TSCEEECCCSSCEESCEEEESHHHHHHHH
T ss_pred             HHHHHHhCCcccCCCCHHHEEEcC---------------------------CCCEEEEecCcchhccccccccccccccc
Confidence            689999999999999999999954                           3456777777665432110          


Q ss_pred             --CccccCCCcccchhhhcCC---CCccchhHhHHHHHHHHHhCCCCCC
Q 025467           71 --NYIVSTRHYRAPEVILGLG---WTYPCDIWSVGCILVELCTGEALFQ  114 (252)
Q Consensus        71 --~~~~~t~~y~aPE~l~~~~---~~~~~Diws~G~~l~~l~~g~~pf~  114 (252)
                        ....||+.|+|||++.+..   ++.++||||+||++|+|++|..||.
T Consensus       199 ~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~  247 (317)
T 2buj_A          199 DWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYD  247 (317)
T ss_dssp             HHHHHHSCGGGCCGGGSSCCSEEEECTHHHHHHHHHHHHHHHHSSCTTH
T ss_pred             ccccccCCcccCCHhHhccCCCcCCCchhhHHHHHHHHHHHHhCCCChh
Confidence              1124688999999987654   6889999999999999999999984

>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}

Probab=99.89  E-value=1.1e-24  Score=196.67  Aligned_cols=85  Identities=28%  Similarity=0.463  Sum_probs=71.8

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCCCccccCCCcc
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYR   80 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~~~~~~t~~y~   80 (252)
                      ||+|||++||+||||||+|||++.                            ..+||+|||.+...... ....||+.|+
T Consensus       194 aL~~lH~~giiHrDlkp~NIll~~----------------------------~~~kl~DFG~a~~~~~~-~~~~gt~~y~  244 (681)
T 2pzi_A          194 ALSYLHSIGLVYNDLKPENIMLTE----------------------------EQLKLIDLGAVSRINSF-GYLYGTPGFQ  244 (681)
T ss_dssp             HHHHHHHTTEECCCCSGGGEEECS----------------------------SCEEECCCTTCEETTCC-SCCCCCTTTS
T ss_pred             HHHHHHHCCCeecccChHHeEEeC----------------------------CcEEEEecccchhcccC-CccCCCcccc
Confidence            589999999999999999999942                            25789999988765443 3457899999


Q ss_pred             cchhhhcCCCCccchhHhHHHHHHHHHhCCCCCCC
Q 025467           81 APEVILGLGWTYPCDIWSVGCILVELCTGEALFQT  115 (252)
Q Consensus        81 aPE~l~~~~~~~~~Diws~G~~l~~l~~g~~pf~~  115 (252)
                      |||++.+. ++.++||||+||++++|++|..||.+
T Consensus       245 aPE~~~~~-~~~~sDi~slG~~l~~l~~g~~~~~~  278 (681)
T 2pzi_A          245 APEIVRTG-PTVATDIYTVGRTLAALTLDLPTRNG  278 (681)
T ss_dssp             CTTHHHHC-SCHHHHHHHHHHHHHHHHSCCCEETT
T ss_pred             CHHHHcCC-CCCceehhhhHHHHHHHHhCCCCCcc
Confidence            99998765 48899999999999999999888754

>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A

Probab=99.83  E-value=3.9e-22  Score=161.88  Aligned_cols=66  Identities=12%  Similarity=-0.007  Sum_probs=53.7

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCCCccccCCCcc
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYR   80 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~~~~~~t~~y~   80 (252)
                      ||+|||++||+||||||+|||++.++                           .++|+++                 .|+
T Consensus       141 aL~~lH~~givH~Dikp~NIll~~~g---------------------------~~kl~~~-----------------~~~  176 (286)
T 3uqc_A          141 AADAAHRAGVALSIDHPSRVRVSIDG---------------------------DVVLAYP-----------------ATM  176 (286)
T ss_dssp             HHHHHHHTTCCCCCCSGGGEEEETTS---------------------------CEEECSC-----------------CCC
T ss_pred             HHHHHHHCCCccCCCCcccEEEcCCC---------------------------CEEEEec-----------------ccc
Confidence            68999999999999999999996544                           4454422                 244


Q ss_pred             cchhhhcCCCCccchhHhHHHHHHHHHhCCCCCCCCC
Q 025467           81 APEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHE  117 (252)
Q Consensus        81 aPE~l~~~~~~~~~Diws~G~~l~~l~~g~~pf~~~~  117 (252)
                      +       .++.++||||+||++|+|++|..||.+.+
T Consensus       177 ~-------~~~~~~Di~slG~il~elltg~~Pf~~~~  206 (286)
T 3uqc_A          177 P-------DANPQDDIRGIGASLYALLVNRWPLPEAG  206 (286)
T ss_dssp             T-------TCCHHHHHHHHHHHHHHHHHSEECSCCCS
T ss_pred             C-------CCCchhHHHHHHHHHHHHHHCCCCCCcCC
Confidence            3       37899999999999999999999998654

>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*

Probab=99.73  E-value=1.7e-20  Score=165.53  Aligned_cols=81  Identities=20%  Similarity=0.202  Sum_probs=49.3

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCC---CccccCC
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ---NYIVSTR   77 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~---~~~~~t~   77 (252)
                      ||+|+|++|||||||||+|||++.                           ++.+||+|||+|+......   ...+||+
T Consensus       351 AL~ylH~~GIIHRDIKPeNILL~~---------------------------dg~vKL~DFGlAr~~~~~~~~~~t~vGTp  403 (569)
T 4azs_A          351 SLAALEKQGFWHDDVRPWNVMVDA---------------------------RQHARLIDFGSIVTTPQDCSWPTNLVQSF  403 (569)
T ss_dssp             HHHHHHHTTCEESCCCGGGEEECT---------------------------TSCEEECCCTTEESCC---CCSHHHHHHH
T ss_pred             HHHHHHHCCceeccCchHhEEECC---------------------------CCCEEEeecccCeeCCCCCccccCceech
Confidence            689999999999999999999944                           4567888888876543332   2357999


Q ss_pred             CcccchhhhcCCCCccchhHhHHHHHHHHHhC
Q 025467           78 HYRAPEVILGLGWTYPCDIWSVGCILVELCTG  109 (252)
Q Consensus        78 ~y~aPE~l~~~~~~~~~Diws~G~~l~~l~~g  109 (252)
                      .|+|||++.+ .+...+|+||+|++++.+.++
T Consensus       404 ~YmAPE~l~g-~~~~~~d~~s~g~~~~~l~~~  434 (569)
T 4azs_A          404 FVFVNELFAE-NKSWNGFWRSAPVHPFNLPQP  434 (569)
T ss_dssp             HHHHHHHC------------------CCCCTT
T ss_pred             hhccHHHhCC-CCCCcccccccccchhhhccc
Confidence            9999999876 456789999999988766544

>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*

Probab=99.42  E-value=1.4e-14  Score=127.08  Aligned_cols=84  Identities=25%  Similarity=0.384  Sum_probs=67.7

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCC----------
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ----------   70 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~----------   70 (252)
                      ||+|||++||+||||||+|||++                           .  .+||+|||+++......          
T Consensus       443 aL~~LH~~gIiHrDiKp~NILl~---------------------------~--~~kL~DFGla~~~~~~~~~~~~~~~~~  493 (540)
T 3en9_A          443 IVGKLHKNDVIHNDLTTSNFIFD---------------------------K--DLYIIDFGLGKISNLDEDKAVDLIVFK  493 (540)
T ss_dssp             HHHHHHHTTEECTTCCTTSEEES---------------------------S--SEEECCCTTCEECCCHHHHHHHHHHHH
T ss_pred             HHHHHHHCcCccCCCCHHHEEEC---------------------------C--eEEEEECccCEECCCccccccchhhhh
Confidence            58999999999999999999993                           3  68899999987665432          


Q ss_pred             CccccCCCcccchhhhc--CCCCccchhHhHHHHHHHHHhCCCCC
Q 025467           71 NYIVSTRHYRAPEVILG--LGWTYPCDIWSVGCILVELCTGEALF  113 (252)
Q Consensus        71 ~~~~~t~~y~aPE~l~~--~~~~~~~Diws~G~~l~~l~~g~~pf  113 (252)
                      ....||+.|+|||++..  ..|+..+|+|+..+-..+-..++.+|
T Consensus       494 ~~~~GT~~y~APEv~~~~~~~Y~~~~d~ws~vl~~l~~v~~r~rY  538 (540)
T 3en9_A          494 KAVLSTHHEKFDEIWERFLEGYKSVYDRWEIILELMKDVERRARY  538 (540)
T ss_dssp             HHHHHHCGGGHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHTCSCC
T ss_pred             hhhcCCCCcCCHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhcccc
Confidence            23478999999999986  46888899999888777766665554

>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*

Probab=99.03  E-value=3.5e-11  Score=97.03  Aligned_cols=48  Identities=25%  Similarity=0.268  Sum_probs=39.3

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCCCccccCCCcc
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYR   80 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~~~~~~t~~y~   80 (252)
                      ||+|||++||+||||||+|||++                            .+.++|+|||++..          +..+.
T Consensus       205 ~l~~lH~~giiHrDlkp~NILl~----------------------------~~~vkl~DFG~a~~----------~~~~~  246 (282)
T 1zar_A          205 EVAKFYHRGIVHGDLSQYNVLVS----------------------------EEGIWIIDFPQSVE----------VGEEG  246 (282)
T ss_dssp             HHHHHHHTTEECSCCSTTSEEEE----------------------------TTEEEECCCTTCEE----------TTSTT
T ss_pred             HHHHHHHCCCEeCCCCHHHEEEE----------------------------CCcEEEEECCCCeE----------CCCCC
Confidence            58999999999999999999994                            34578888888753          34578


Q ss_pred             cchhhh
Q 025467           81 APEVIL   86 (252)
Q Consensus        81 aPE~l~   86 (252)
                      |||.+.
T Consensus       247 a~e~l~  252 (282)
T 1zar_A          247 WREILE  252 (282)
T ss_dssp             HHHHHH
T ss_pred             HHHHHH
Confidence            898874

>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*

Probab=98.64  E-value=1.2e-08  Score=81.13  Aligned_cols=36  Identities=19%  Similarity=0.395  Sum_probs=31.4

Q ss_pred             Chhhhh-ccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccc
Q 025467            1 MFAVMH-DLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTY   65 (252)
Q Consensus         1 aL~~lH-~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~   65 (252)
                      ||.||| ++||+||||||+|||+.                           .  .++|+|||++..
T Consensus       182 ~l~~lH~~~givHrDlkp~NILl~---------------------------~--~~~liDFG~a~~  218 (258)
T 1zth_A          182 NVKRLYQEAELVHADLSEYNIMYI---------------------------D--KVYFIDMGQAVT  218 (258)
T ss_dssp             HHHHHHHTSCEECSSCSTTSEEES---------------------------S--SEEECCCTTCEE
T ss_pred             HHHHHHHHCCEEeCCCCHHHEEEc---------------------------C--cEEEEECccccc
Confidence            588999 99999999999999993                           3  588999998865

>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A

Probab=98.03  E-value=1.1e-06  Score=73.45  Aligned_cols=26  Identities=19%  Similarity=0.351  Sum_probs=23.7

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCC
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSE   26 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~   26 (252)
                      ||.+||++|||||||||.|||+..++
T Consensus       217 ~l~~lH~~gIVHrDLKp~NILl~~dg  242 (397)
T 4gyi_A          217 LILRLAKHGLIHGDFNEFNILIREEK  242 (397)
T ss_dssp             HHHHHHHTTEECSCCSTTSEEEEEEE
T ss_pred             HHHHHHHCCCcCCCCCHHHEEEeCCC
Confidence            57899999999999999999998765

>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A

Probab=95.88  E-value=0.0011  Score=53.30  Aligned_cols=20  Identities=20%  Similarity=0.175  Sum_probs=17.1

Q ss_pred             chhHhHHHHHHHHHhCCCCC
Q 025467           94 CDIWSVGCILVELCTGEALF  113 (252)
Q Consensus        94 ~Diws~G~~l~~l~~g~~pf  113 (252)
                      .+.|+++.++|.+.+|..+|
T Consensus       268 ~~~~~l~~~~~~~~~g~~~~  287 (304)
T 3sg8_A          268 EKYWSFEKIIYGKEYGYMDW  287 (304)
T ss_dssp             HHHHHHHHHHHHHHTTCHHH
T ss_pred             HHHHHHHHHHHHHHcCCHHH
Confidence            57899999999999996654

>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*

Probab=95.47  E-value=0.004  Score=48.78  Aligned_cols=16  Identities=31%  Similarity=0.517  Sum_probs=14.3

Q ss_pred             cCccccCCCCCCeEee
Q 025467            8 LCMIHTDLKPENVLLV   23 (252)
Q Consensus         8 ~~ivHrdlk~~Nil~~   23 (252)
                      ..++|+|+++.||++.
T Consensus       183 ~~l~HgDl~~~Nil~~  198 (263)
T 3tm0_A          183 LVFSHGDLGDSNIFVK  198 (263)
T ss_dssp             EEEECSSCCTTSEEEE
T ss_pred             ceEECCCCCcCcEEEE
Confidence            4589999999999994

>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6

Probab=94.79  E-value=0.0067  Score=47.16  Aligned_cols=16  Identities=25%  Similarity=0.364  Sum_probs=14.2

Q ss_pred             cCccccCCCCCCeEee
Q 025467            8 LCMIHTDLKPENVLLV   23 (252)
Q Consensus         8 ~~ivHrdlk~~Nil~~   23 (252)
                      .+++|+|++|.||++.
T Consensus       184 ~~l~HgDl~~~Nil~~  199 (264)
T 1nd4_A          184 LVVTHGDACLPNIMVE  199 (264)
T ss_dssp             EEEECSSCCGGGEEEE
T ss_pred             eEEECCCCCCCcEEEE
Confidence            4599999999999994

>2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis}

Probab=93.25  E-value=0.037  Score=44.80  Aligned_cols=16  Identities=31%  Similarity=0.314  Sum_probs=14.6

Q ss_pred             cCccccCCCCCCeEee
Q 025467            8 LCMIHTDLKPENVLLV   23 (252)
Q Consensus         8 ~~ivHrdlk~~Nil~~   23 (252)
                      .+++|+|+++.|||+.
T Consensus       222 ~~l~HgD~~~~Nil~~  237 (346)
T 2q83_A          222 PNLCHQDYGTGNTLLG  237 (346)
T ss_dssp             CCEECSSCSTTSEEEC
T ss_pred             CceecCCCCcccEEEe
Confidence            5799999999999994

>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}

Probab=92.41  E-value=0.052  Score=44.52  Aligned_cols=17  Identities=18%  Similarity=0.509  Sum_probs=15.1

Q ss_pred             cCccccCCCCCCeEeec
Q 025467            8 LCMIHTDLKPENVLLVS   24 (252)
Q Consensus         8 ~~ivHrdlk~~Nil~~~   24 (252)
                      .+++|+|+++.|||+..
T Consensus       216 ~~lvHgD~~~~Nil~~~  232 (359)
T 3dxp_A          216 TSIVHGDYRLDNLMFHP  232 (359)
T ss_dssp             CEEECSSCSGGGEEECS
T ss_pred             ceEEeCCCCCCcEEEeC
Confidence            57999999999999954

>2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana}

Probab=91.30  E-value=0.08  Score=44.54  Aligned_cols=18  Identities=28%  Similarity=0.527  Sum_probs=15.5

Q ss_pred             hccCccccCCCCCCeEee
Q 025467            6 HDLCMIHTDLKPENVLLV   23 (252)
Q Consensus         6 H~~~ivHrdlk~~Nil~~   23 (252)
                      +...++|+|+++.|||+.
T Consensus       230 ~~~~liHGDl~~~Nil~~  247 (420)
T 2pyw_A          230 RAQALIHGDLHTGSVMVT  247 (420)
T ss_dssp             BCCEEECSCCSGGGEEEC
T ss_pred             CCCeEEecCCCCCcEEEe
Confidence            356799999999999994

>3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP}

Probab=88.84  E-value=0.17  Score=40.86  Aligned_cols=17  Identities=24%  Similarity=0.661  Sum_probs=14.8

Q ss_pred             cCccccCCCCCCeEeec
Q 025467            8 LCMIHTDLKPENVLLVS   24 (252)
Q Consensus         8 ~~ivHrdlk~~Nil~~~   24 (252)
                      ..++|+|+.+.||++..
T Consensus       183 ~~lvHgD~~~~Nil~~~  199 (333)
T 3csv_A          183 MVFVHRDFHAQNLLWLP  199 (333)
T ss_dssp             CEEECSCCSGGGEEECT
T ss_pred             CeeEeCCcCcccEEecc
Confidence            56999999999999943

>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*

Probab=88.77  E-value=0.17  Score=39.43  Aligned_cols=16  Identities=19%  Similarity=0.434  Sum_probs=13.9

Q ss_pred             CccccCCCCCCeEeec
Q 025467            9 CMIHTDLKPENVLLVS   24 (252)
Q Consensus         9 ~ivHrdlk~~Nil~~~   24 (252)
                      .++|+|+.+.|||+..
T Consensus       194 ~l~HGDl~~~Nil~~~  209 (272)
T 4gkh_A          194 VVTHGDFSLDNLIFDE  209 (272)
T ss_dssp             EEECSCCCTTSEEEET
T ss_pred             EEEcCCCCCCeEEEEC
Confidence            4899999999999943

>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*

Probab=87.60  E-value=0.22  Score=39.84  Aligned_cols=17  Identities=35%  Similarity=0.511  Sum_probs=14.7

Q ss_pred             cCccccCCCCCCeEeec
Q 025467            8 LCMIHTDLKPENVLLVS   24 (252)
Q Consensus         8 ~~ivHrdlk~~Nil~~~   24 (252)
                      ..++|+|+++.||++..
T Consensus       190 ~~~~HgD~~~~N~l~~~  206 (306)
T 3tdw_A          190 PRLIHGDLSPDHFLTNL  206 (306)
T ss_dssp             CEEECSCCSGGGEEECT
T ss_pred             CeeEeCCCCcccEEEec
Confidence            46899999999999954

>2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6

Probab=86.85  E-value=0.17  Score=40.61  Aligned_cols=17  Identities=35%  Similarity=0.595  Sum_probs=14.8

Q ss_pred             cCccccCCCCCCeEeec
Q 025467            8 LCMIHTDLKPENVLLVS   24 (252)
Q Consensus         8 ~~ivHrdlk~~Nil~~~   24 (252)
                      .+++|+|+.+.|||+..
T Consensus       187 ~~liHgDl~~~Nil~~~  203 (322)
T 2ppq_A          187 AGVIHADLFQDNVFFLG  203 (322)
T ss_dssp             EEEECSCCCGGGEEEET
T ss_pred             cccCCCCCCccCEEEeC
Confidence            46999999999999953

>1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6

Probab=85.59  E-value=0.36  Score=38.81  Aligned_cols=15  Identities=27%  Similarity=0.441  Sum_probs=13.7

Q ss_pred             cCccccCCCCCCeEe
Q 025467            8 LCMIHTDLKPENVLL   22 (252)
Q Consensus         8 ~~ivHrdlk~~Nil~   22 (252)
                      ..++|+|+++.||++
T Consensus       195 ~~l~HgD~~~~Nil~  209 (328)
T 1zyl_A          195 VLRLHGDCHAGNILW  209 (328)
T ss_dssp             CEECCSSCSGGGEEE
T ss_pred             eeeeeCCCCcccEeE
Confidence            458999999999999

>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A*

Probab=84.57  E-value=0.24  Score=40.37  Aligned_cols=17  Identities=24%  Similarity=0.333  Sum_probs=14.9

Q ss_pred             ccCccccCCCCCCeEee
Q 025467            7 DLCMIHTDLKPENVLLV   23 (252)
Q Consensus         7 ~~~ivHrdlk~~Nil~~   23 (252)
                      ...++|+|+.+.||++.
T Consensus       221 ~~~l~HgDl~~~Nil~~  237 (357)
T 3ats_A          221 EPVLLWGDARVGNVLYR  237 (357)
T ss_dssp             CCEEECSSCSGGGEEEE
T ss_pred             CceEEeCCCCCCeEEEe
Confidence            35699999999999995

>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A*

Probab=84.36  E-value=0.44  Score=39.55  Aligned_cols=17  Identities=24%  Similarity=0.403  Sum_probs=14.8

Q ss_pred             ccCccccCCCCCCeEee
Q 025467            7 DLCMIHTDLKPENVLLV   23 (252)
Q Consensus         7 ~~~ivHrdlk~~Nil~~   23 (252)
                      ...++|+|+.+.||++.
T Consensus       226 ~~~L~HGDl~~~Nil~~  242 (397)
T 2olc_A          226 AETLIHGDLHTGSIFAS  242 (397)
T ss_dssp             CCEEECSCCSGGGEEEC
T ss_pred             CCceeeCCCCcCcEEEe
Confidence            35699999999999994

>3c5i_A Choline kinase; choline, kinase, malaria, transferase, structural genomics, structural genomics consortium; 2.20A {Plasmodium knowlesi} PDB: 3fi8_A*

Probab=81.69  E-value=0.6  Score=38.30  Aligned_cols=16  Identities=25%  Similarity=0.565  Sum_probs=14.1

Q ss_pred             cCccccCCCCCCeEee
Q 025467            8 LCMIHTDLKPENVLLV   23 (252)
Q Consensus         8 ~~ivHrdlk~~Nil~~   23 (252)
                      .+++|+|+++.|||+.
T Consensus       212 ~~l~HgDl~~~Nil~~  227 (369)
T 3c5i_A          212 IVFCHNDLQENNIINT  227 (369)
T ss_dssp             EEEECSCCCGGGEEEC
T ss_pred             eEEEeCCCCcccEEec
Confidence            3589999999999984

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	252
d1s9ja_	322	d.144.1.7 (A:) Dual specificity mitogen-activated	3e-26
d1q8ya_	362	d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces	6e-24
d1blxa_	305	d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (H	2e-23
d3blha1	318	d.144.1.7 (A:8-325) Cell division protein kinase 9	2e-23
d2b1pa1	355	d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3	4e-22
d1pmea_	345	d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapien	5e-22
d1ua2a_	299	d.144.1.7 (A:) Cell division protein kinase 7, CDK	2e-21
d1q5ka_	350	d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gs	4e-21
d2gfsa1	348	d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sa	6e-20
d2j4za1	263	d.144.1.7 (A:126-388) Aurora-related kinase 1 (aur	7e-20
d2j4za1	263	d.144.1.7 (A:126-388) Aurora-related kinase 1 (aur	3e-06
d3bqca1	328	d.144.1.7 (A:3-330) Protein kinase CK2, alpha subu	8e-20
d1gz8a_	298	d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (H	4e-19
d1koaa2	350	d.144.1.7 (A:5915-6264) Twitchin, kinase domain {C	1e-18
d1koaa2	350	d.144.1.7 (A:5915-6264) Twitchin, kinase domain {C	1e-06
d1koba_	352	d.144.1.7 (A:) Twitchin, kinase domain {California	3e-18
d1koba_	352	d.144.1.7 (A:) Twitchin, kinase domain {California	5e-07
d1cm8a_	346	d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo s	5e-18
d1jksa_	293	d.144.1.7 (A:) Death-associated protein kinase, Da	9e-17
d1jksa_	293	d.144.1.7 (A:) Death-associated protein kinase, Da	1e-05
d1tkia_	321	d.144.1.7 (A:) Titin, kinase domain {Human (Homo s	1e-16
d1tkia_	321	d.144.1.7 (A:) Titin, kinase domain {Human (Homo s	3e-06
d1t4ha_	270	d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sa	2e-16
d1t4ha_	270	d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sa	4e-05
d1ob3a_	286	d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmod	2e-16
d1uu3a_	288	d.144.1.7 (A:) 3-phosphoinositide dependent protei	5e-16
d1uu3a_	288	d.144.1.7 (A:) 3-phosphoinositide dependent protei	0.001
d1unla_	292	d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (H	5e-16
d2ozaa1	335	d.144.1.7 (A:51-385) MAP kinase activated protein	1e-15
d2ozaa1	335	d.144.1.7 (A:51-385) MAP kinase activated protein	6e-07
d2java1	269	d.144.1.7 (A:3-271) Serine/threonine-protein kinas	2e-15
d2java1	269	d.144.1.7 (A:3-271) Serine/threonine-protein kinas	2e-04
d1yhwa1	293	d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [	2e-15
d1yhwa1	293	d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [	2e-05
d1nvra_	271	d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {	3e-15
d1nvra_	271	d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {	3e-06
d1csna_	293	d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast	9e-15
d1u5ra_	309	d.144.1.7 (A:) Serine/threonine protein kinase TAO	1e-14
d1u5ra_	309	d.144.1.7 (A:) Serine/threonine protein kinase TAO	2e-06
d1phka_	277	d.144.1.7 (A:) gamma-subunit of glycogen phosphory	2e-14
d1phka_	277	d.144.1.7 (A:) gamma-subunit of glycogen phosphory	6e-06
d1uwha_	276	d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens)	3e-14
d1fota_	316	d.144.1.7 (A:) cAMP-dependent PK, catalytic subuni	5e-14
d1fota_	316	d.144.1.7 (A:) cAMP-dependent PK, catalytic subuni	0.002
d1a06a_	307	d.144.1.7 (A:) Calmodulin-dependent protein kinase	9e-14
d1a06a_	307	d.144.1.7 (A:) Calmodulin-dependent protein kinase	2e-06
d1ckia_	299	d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus n	1e-13
d2jfla1	288	d.144.1.7 (A:21-308) STE20-like serine/threonine-p	2e-13
d2jfla1	288	d.144.1.7 (A:21-308) STE20-like serine/threonine-p	2e-06
d1omwa3	364	d.144.1.7 (A:186-549) G-protein coupled receptor k	9e-13
d1omwa3	364	d.144.1.7 (A:186-549) G-protein coupled receptor k	8e-04
d1xjda_	320	d.144.1.7 (A:) Protein kinase C, theta type {Human	1e-12
d1xjda_	320	d.144.1.7 (A:) Protein kinase C, theta type {Human	8e-04
d1o6ya_	277	d.144.1.7 (A:) Mycobacterial protein kinase PknB,	1e-12
d1byga_	262	d.144.1.7 (A:) Carboxyl-terminal src kinase (csk)	1e-12
d1rdqe_	350	d.144.1.7 (E:) cAMP-dependent PK, catalytic subuni	2e-12
d1fmka3	285	d.144.1.7 (A:249-533) c-src tyrosine kinase {Human	4e-12
d1o6la_	337	d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sap	5e-12
d1o6la_	337	d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sap	5e-04
d1vjya_	303	d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human	5e-12
d1r0pa_	311	d.144.1.7 (A:) Hepatocyte growth factor receptor,	9e-12
d1mqba_	283	d.144.1.7 (A:) epha2 receptor tyrosine kinase {Hum	2e-11
d1xwsa_	273	d.144.1.7 (A:) Proto-oncogene serine/threonine-pro	3e-11
d1xwsa_	273	d.144.1.7 (A:) Proto-oncogene serine/threonine-pro	3e-05
d1sm2a_	263	d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Hu	5e-11
d1qpca_	272	d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Hom	1e-10
d1xbba_	277	d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human	1e-10
d1u46a_	273	d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Hum	2e-10
d1rjba_	325	d.144.1.7 (A:) Fl cytokine receptor {Human (Homo s	2e-10
d1lufa_	301	d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus n	2e-10
d1xkka_	317	d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-	1e-09
d1fvra_	309	d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [	2e-09
d1jpaa_	299	d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mou	2e-09
d1t46a_	311	d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens	3e-09
d1opja_	287	d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mou	3e-09
d1k2pa_	258	d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Hum	4e-09
d1u59a_	285	d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Hum	5e-09
d1p4oa_	308	d.144.1.7 (A:) Insulin-like growth factor 1 recept	2e-08
d1fgka_	299	d.144.1.7 (A:) Fibroblast growth factor receptor 1	3e-08
d1vzoa_	322	d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5	5e-08
d1vzoa_	322	d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5	0.002
d1mp8a_	273	d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Huma	6e-08
d1ywna1	299	d.144.1.7 (A:818-1166) Vascular endothelial growth	1e-07

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  102 bits (254), Expect = 3e-26
 Identities = 46/243 (18%), Positives = 72/243 (29%), Gaps = 62/243 (25%)

Query: 6   HDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG-STT 64
               ++H D+KP N+L+ S                              IK+ DFG S  
Sbjct: 122 EKHKIMHRDVKPSNILVNSRGE---------------------------IKLCDFGVSGQ 154

Query: 65  YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAM 124
                 N  V TR Y +PE + G  ++   DIWS+G  LVE+  G       +  E   M
Sbjct: 155 LIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELM 214

Query: 125 MERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVPFFYGSFV 184
               +         R           G    P   A  E +  ++  P  ++P    S  
Sbjct: 215 FGCQVEGDAAETPPRPRTPGRPLSSYGMDSRPP-MAIFELLDYIVNEPPPKLPSGVFS-- 271

Query: 185 EFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPF 244
                                           +    +   L  +P +R   ++ + H F
Sbjct: 272 -------------------------------LEFQDFVNKCLIKNPAERADLKQLMVHAF 300

Query: 245 FTR 247
             R
Sbjct: 301 IKR 303

>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 362

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Sky1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 96.6 bits (239), Expect = 6e-24
 Identities = 57/248 (22%), Positives = 91/248 (36%), Gaps = 63/248 (25%)

Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
                +IHTD+KPENVL+   +                            IK+ D G+  
Sbjct: 142 HRRCGIIHTDIKPENVLMEIVDS---------------------PENLIQIKIADLGNAC 180

Query: 65  YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHE------N 118
           +        + TR YR+PEV+LG  W    DIWS  C++ EL TG+ LF+  E      +
Sbjct: 181 WYDEHYTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKD 240

Query: 119 LEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVPF 178
            +H+A +  +LG LP ++L+        +  RG L                 + +L+   
Sbjct: 241 DDHIAQIIELLGELPSYLLRNGKYTRTFFNSRGLLR---------------NISKLKFWP 285

Query: 179 FYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTARE 238
                 E                       +     A +++  L  +L+ DP  R  A  
Sbjct: 286 LEDVLTE---------------------KYKFSKDEAKEISDFLSPMLQLDPRKRADAGG 324

Query: 239 ALRHPFFT 246
            + HP+  
Sbjct: 325 LVNHPWLK 332

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]} Length = 305

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 94.6 bits (234), Expect = 2e-23
 Identities = 53/241 (21%), Positives = 83/241 (34%), Gaps = 76/241 (31%)

Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           +H   ++H DLKP+N+L+ SS  IK+ D                                
Sbjct: 132 LHSHRVVHRDLKPQNILVTSSGQIKLAD-------------------------FGLARIY 166

Query: 65  YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAM 124
             +     +V T  YRAPEV+L   +  P D+WSVGCI  E+   + LF+   +++ L  
Sbjct: 167 SFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGK 226

Query: 125 MERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVPFFYGSFV 184
           +  V+G   +                   DWP   A             ++         
Sbjct: 227 ILDVIGLPGEE------------------DWPRDVALPRQAFHSKSAQPIE--------- 259

Query: 185 EFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPF 244
                                  +  +D    D   LL   L ++P  R++A  AL HP+
Sbjct: 260 ---------------------KFVTDIDELGKD---LLLKCLTFNPAKRISAYSALSHPY 295

Query: 245 F 245
           F
Sbjct: 296 F 296

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]} Length = 318

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 94.2 bits (233), Expect = 2e-23
 Identities = 47/247 (19%), Positives = 87/247 (35%), Gaps = 67/247 (27%)

Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           +H   ++H D+K  NVL+     +K+ D+  +                   +       +
Sbjct: 133 IHRNKILHRDMKAANVLITRDGVLKLADFGLA-------------------RAFSLAKNS 173

Query: 65  YERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLA 123
                 N  V T  YR PE++LG   +  P D+W  GCI+ E+ T   + Q +     LA
Sbjct: 174 QPNRYTNR-VVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLA 232

Query: 124 MMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVPFFYGSF 183
           ++ ++ G +   +   VD +  +   +  L   +    ++ +K+ ++ P           
Sbjct: 233 LISQLCGSITPEVWPNVDNY--ELYEKLELVKGQKRKVKDRLKAYVRDP----------- 279

Query: 184 VEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHP 243
                                                L+  LL  DP  R+ + +AL H 
Sbjct: 280 ---------------------------------YALDLIDKLLVLDPAQRIDSDDALNHD 306

Query: 244 FFTRDHL 250
           FF  D +
Sbjct: 307 FFWSDPM 313

>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]} Length = 355

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-jun N-terminal kinase (jnk3s)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 91.2 bits (225), Expect = 4e-22
 Identities = 53/247 (21%), Positives = 82/247 (33%), Gaps = 61/247 (24%)

Query: 3   AVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGS 62
             +H   +IH DLKP N+++ S   +K+ D                              
Sbjct: 133 KHLHSAGIIHRDLKPSNIVVKSDCTLKILD-------------------------FGLAR 167

Query: 63  TTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHL 122
           T          V TR+YRAPEVILG+G+    DIWSVGCI+ E+   + LF   + ++  
Sbjct: 168 TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQW 227

Query: 123 AMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVPFFYGS 182
             +   LG      +K++      YV                                  
Sbjct: 228 NKVIEQLGTPCPEFMKKLQPTVRNYVEN-------------------------------- 255

Query: 183 FVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRH 242
               +                     +H    A     LL  +L  DP  R++  +AL+H
Sbjct: 256 ----RPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQH 311

Query: 243 PFFTRDH 249
           P+    +
Sbjct: 312 PYINVWY 318

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]} Length = 345

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 91.0 bits (225), Expect = 5e-22
 Identities = 55/249 (22%), Positives = 92/249 (36%), Gaps = 69/249 (27%)

Query: 2   FAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG 61
              +H   ++H DLKP N+LL ++  +K+ D+  +     D  +   +            
Sbjct: 122 LKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFL------------ 169

Query: 62  STTYERPDQNYIVSTRHYRAPEVIL-GLGWTYPCDIWSVGCILVELCTGEALFQTHENLE 120
                       V+TR YRAPE++L   G+T   DIWSVGCIL E+ +   +F     L+
Sbjct: 170 ---------TEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLD 220

Query: 121 HLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVPFFY 180
            L  +  +LG   Q                   D       +     +    + +VP+  
Sbjct: 221 QLNHILGILGSPSQE------------------DLNCIINLKARNYLLSLPHKNKVPW-- 260

Query: 181 GSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREAL 240
                                   N +  + D  A D   LL  +L ++P  R+   +AL
Sbjct: 261 ------------------------NRLFPNADSKALD---LLDKMLTFNPHKRIEVEQAL 293

Query: 241 RHPFFTRDH 249
            HP+  + +
Sbjct: 294 AHPYLEQYY 302

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 88.8 bits (219), Expect = 2e-21
 Identities = 50/247 (20%), Positives = 85/247 (34%), Gaps = 75/247 (30%)

Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           +H   ++H DLKP N+LL  +  +K+ D+  +      +  +                  
Sbjct: 116 LHQHWILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRAY------------------ 157

Query: 65  YERPDQNYIVSTRHYRAPEVILGL-GWTYPCDIWSVGCILVELCTGEALFQTHENLEHLA 123
                  + V TR YRAPE++ G   +    D+W+VGCIL EL           +L+ L 
Sbjct: 158 ------THQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLT 211

Query: 124 MMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVPFFYGSF 183
            +   LG   +                    WP+  +  + +                  
Sbjct: 212 RIFETLGTPTEE------------------QWPDMCSLPDYVT----------------- 236

Query: 184 VEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHP 243
                            SF    +      +  DL  L+QGL  ++P  R+TA +AL+  
Sbjct: 237 ---------------FKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKMK 281

Query: 244 FFTRDHL 250
           +F+    
Sbjct: 282 YFSNRPG 288

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 88.3 bits (218), Expect = 4e-21
 Identities = 53/248 (21%), Positives = 89/248 (35%), Gaps = 78/248 (31%)

Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           +H   + H D+KP+N+LL                           P ++ +K+ DFGS  
Sbjct: 138 IHSFGICHRDIKPQNLLL--------------------------DPDTAVLKLCDFGSAK 171

Query: 65  YERPDQNY--IVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHENLEH 121
                +     + +R+YRAPE+I G   +T   D+WS GC+L EL  G+ +F     ++ 
Sbjct: 172 QLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQ 231

Query: 122 LAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVPFFYG 181
           L  + +VLG   +  ++ ++ +  ++                      K P+++      
Sbjct: 232 LVEIIKVLGTPTREQIREMNPNYTEF----------------------KFPQIK------ 263

Query: 182 SFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALR 241
                                           +  +   L   LL Y PT RLT  EA  
Sbjct: 264 ---------------------AHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACA 302

Query: 242 HPFFTRDH 249
           H FF    
Sbjct: 303 HSFFDELR 310

>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]} Length = 348

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 85.3 bits (210), Expect = 6e-20
 Identities = 55/249 (22%), Positives = 94/249 (37%), Gaps = 75/249 (30%)

Query: 2   FAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG 61
              +H   +IH DLKP N+                            + +   +K++DFG
Sbjct: 134 LKYIHSADIIHRDLKPSNLA---------------------------VNEDCELKILDFG 166

Query: 62  STTYERPDQNYIVSTRHYRAPEVILGLG-WTYPCDIWSVGCILVELCTGEALFQTHENLE 120
              +   +    V+TR YRAPE++L    +    DIWSVGCI+ EL TG  LF   ++++
Sbjct: 167 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHID 226

Query: 121 HLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVPFFY 180
            L ++ R++G     +LK++   + +   +     P+   +                   
Sbjct: 227 QLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFAN------------------ 268

Query: 181 GSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREAL 240
                                     +    +  A D   LL+ +L  D   R+TA +AL
Sbjct: 269 --------------------------VFIGANPLAVD---LLEKMLVLDSDKRITAAQAL 299

Query: 241 RHPFFTRDH 249
            H +F + H
Sbjct: 300 AHAYFAQYH 308

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 83.9 bits (207), Expect = 7e-20
 Identities = 33/132 (25%), Positives = 51/132 (38%), Gaps = 26/132 (19%)

Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
            H   +IH D+KPEN+LL S+  +K+ D+  S+H P                        
Sbjct: 122 CHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRT------------------- 162

Query: 65  YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAM 124
                   +  T  Y  PE+I G       D+WS+G +  E   G+  F+ +   E    
Sbjct: 163 -------TLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKR 215

Query: 125 MERVLGPLPQHM 136
           + RV    P  +
Sbjct: 216 ISRVEFTFPDFV 227

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 45.0 bits (106), Expect = 3e-06
 Identities = 11/32 (34%), Positives = 18/32 (56%)

Query: 217 DLTHLLQGLLRYDPTDRLTAREALRHPFFTRD 248
               L+  LL+++P+ R   RE L HP+ T +
Sbjct: 230 GARDLISRLLKHNPSQRPMLREVLEHPWITAN 261

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]} Length = 328

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

 Score = 84.5 bits (208), Expect = 8e-20
 Identities = 54/246 (21%), Positives = 92/246 (37%), Gaps = 71/246 (28%)

Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
            H + ++H D+KP NV++                            +   +++ID+G   
Sbjct: 145 CHSMGIMHRDVKPHNVMIDH--------------------------EHRKLRLIDWGLAE 178

Query: 65  YERPDQ--NYIVSTRHYRAPEVILGL-GWTYPCDIWSVGCILVELCTGE-ALFQTHENLE 120
           +  P Q  N  V++R+++ PE+++    + Y  D+WS+GC+L  +   +   F  H+N +
Sbjct: 179 FYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYD 238

Query: 121 HLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVPFFY 180
            L  + +VLG    +                  D+ +        +    L R     + 
Sbjct: 239 QLVRIAKVLGTEDLY------------------DYIDKYNIELDPRFNDILGRHSRKRW- 279

Query: 181 GSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREAL 240
                                F  +     V   A D    L  LLRYD   RLTAREA+
Sbjct: 280 -------------------ERFVHSENQHLVSPEALD---FLDKLLRYDHQSRLTAREAM 317

Query: 241 RHPFFT 246
            HP+F 
Sbjct: 318 EHPYFY 323

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]} Length = 298

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 82.6 bits (203), Expect = 4e-19
 Identities = 58/245 (23%), Positives = 87/245 (35%), Gaps = 74/245 (30%)

Query: 2   FAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG 61
            A  H   ++H DLKP+N+L+ +   IK+ D+  +         +               
Sbjct: 115 LAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY--------------- 159

Query: 62  STTYERPDQNYIVSTRHYRAPEVILGLG-WTYPCDIWSVGCILVELCTGEALFQTHENLE 120
                     + V T  YRAPE++LG   ++   DIWS+GCI  E+ T  ALF     ++
Sbjct: 160 ---------THEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEID 210

Query: 121 HLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVPFFY 180
            L  + R LG   + +                  WP   +  +   S  K  R       
Sbjct: 211 QLFRIFRTLGTPDEVV------------------WPGVTSMPDYKPSFPKWARQDFS--- 249

Query: 181 GSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREAL 240
                                       + V     D   LL  +L YDP  R++A+ AL
Sbjct: 250 ----------------------------KVVPPLDEDGRSLLSQMLHYDPNKRISAKAAL 281

Query: 241 RHPFF 245
            HPFF
Sbjct: 282 AHPFF 286

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

 Score = 81.3 bits (200), Expect = 1e-18
 Identities = 37/148 (25%), Positives = 63/148 (42%), Gaps = 27/148 (18%)

Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           MH+   +H DLKPEN++  +                          +S+ +K+IDFG T 
Sbjct: 140 MHENNYVHLDLKPENIMFTT-------------------------KRSNELKLIDFGLTA 174

Query: 65  YERPDQNYIVST--RHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHL 122
           +  P Q+  V+T    + APEV  G    Y  D+WSVG +   L +G + F    + E L
Sbjct: 175 HLDPKQSVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETL 234

Query: 123 AMMERVLGPLPQHMLKRVDRHAEKYVRR 150
             ++     +       +    + ++R+
Sbjct: 235 RNVKSCDWNMDDSAFSGISEDGKDFIRK 262

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

 Score = 46.2 bits (109), Expect = 1e-06
 Identities = 12/34 (35%), Positives = 18/34 (52%)

Query: 217 DLTHLLQGLLRYDPTDRLTAREALRHPFFTRDHL 250
           D    ++ LL  DP  R+T  +AL HP+ T  + 
Sbjct: 255 DGKDFIRKLLLADPNTRMTIHQALEHPWLTPGNA 288

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]} Length = 352

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

 Score = 80.5 bits (198), Expect = 3e-18
 Identities = 34/148 (22%), Positives = 65/148 (43%), Gaps = 27/148 (18%)

Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           MH+  ++H D+KPEN++                             K+S++K+IDFG  T
Sbjct: 143 MHEHSIVHLDIKPENIMC-------------------------ETKKASSVKIIDFGLAT 177

Query: 65  YERPDQ--NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHL 122
              PD+      +T  + APE++      +  D+W++G +   L +G + F   ++LE L
Sbjct: 178 KLNPDEIVKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLETL 237

Query: 123 AMMERVLGPLPQHMLKRVDRHAEKYVRR 150
             ++R      +     V   A+ +++ 
Sbjct: 238 QNVKRCDWEFDEDAFSSVSPEAKDFIKN 265

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]} Length = 352

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

 Score = 47.4 bits (112), Expect = 5e-07
 Identities = 12/33 (36%), Positives = 19/33 (57%)

Query: 217 DLTHLLQGLLRYDPTDRLTAREALRHPFFTRDH 249
           +    ++ LL+ +P  RLT  +AL HP+   DH
Sbjct: 258 EAKDFIKNLLQKEPRKRLTVHDALEHPWLKGDH 290

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]} Length = 346

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 79.9 bits (196), Expect = 5e-18
 Identities = 61/246 (24%), Positives = 95/246 (38%), Gaps = 75/246 (30%)

Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           +H   +IH DLKP N+ +                            +   +K++DFG   
Sbjct: 137 IHAAGIIHRDLKPGNLAV---------------------------NEDCELKILDFGLAR 169

Query: 65  YERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLA 123
               +    V TR YRAPEVIL  + +T   DIWSVGCI+ E+ TG+ LF+  ++L+ L 
Sbjct: 170 QADSEMTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLK 229

Query: 124 MMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVPFFYGSF 183
            + +V G  P   ++R+     K   +G  +  +   +                      
Sbjct: 230 EIMKVTGTPPAEFVQRLQSDEAKNYMKGLPELEKKDFAS--------------------- 268

Query: 184 VEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHP 243
                                  I+ +    A +   LL+ +L  D   R+TA EAL HP
Sbjct: 269 -----------------------ILTNASPLAVN---LLEKMLVLDAEQRVTAGEALAHP 302

Query: 244 FFTRDH 249
           +F   H
Sbjct: 303 YFESLH 308

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 75.6 bits (185), Expect = 9e-17
 Identities = 37/152 (24%), Positives = 54/152 (35%), Gaps = 25/152 (16%)

Query: 1   MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDF 60
               +H L + H DLKPEN++L+                        R      IK+IDF
Sbjct: 125 GVYYLHSLQIAHFDLKPENIMLLD-----------------------RNVPKPRIKIIDF 161

Query: 61  GSTTYERPDQ--NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHEN 118
           G             I  T  + APE++         D+WS+G I   L +G + F     
Sbjct: 162 GLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTK 221

Query: 119 LEHLAMMERVLGPLPQHMLKRVDRHAEKYVRR 150
            E LA +  V               A+ ++RR
Sbjct: 222 QETLANVSAVNYEFEDEYFSNTSALAKDFIRR 253

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 42.8 bits (100), Expect = 1e-05
 Identities = 9/47 (19%), Positives = 25/47 (53%)

Query: 199 IASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFF 245
           +++       ++  +++      ++ LL  DP  R+T +++L+HP+ 
Sbjct: 228 VSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWI 274

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]} Length = 321

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 75.5 bits (185), Expect = 1e-16
 Identities = 29/148 (19%), Positives = 55/148 (37%), Gaps = 27/148 (18%)

Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           +H   + H D++PEN++  +     +                         K+I+FG   
Sbjct: 118 LHSHNIGHFDIRPENIIYQTRRSSTI-------------------------KIIEFGQAR 152

Query: 65  YERPDQNY--IVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHL 122
             +P  N+  + +   Y APEV      +   D+WS+G ++  L +G   F    N + +
Sbjct: 153 QLKPGDNFRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQQII 212

Query: 123 AMMERVLGPLPQHMLKRVDRHAEKYVRR 150
             +        +   K +   A  +V R
Sbjct: 213 ENIMNAEYTFDEEAFKEISIEAMDFVDR 240

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]} Length = 321

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 45.0 bits (106), Expect = 3e-06
 Identities = 11/35 (31%), Positives = 18/35 (51%)

Query: 217 DLTHLLQGLLRYDPTDRLTAREALRHPFFTRDHLR 251
           +    +  LL  +   R+TA EAL+HP+  +   R
Sbjct: 233 EAMDFVDRLLVKERKSRMTASEALQHPWLKQKIER 267

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 270

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 74.6 bits (183), Expect = 2e-16
 Identities = 30/175 (17%), Positives = 59/175 (33%), Gaps = 32/175 (18%)

Query: 2   FAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG 61
           F       +IH DLK +N+ +                             + ++K+ D G
Sbjct: 127 FLHTRTPPIIHRDLKCDNIFITG--------------------------PTGSVKIGDLG 160

Query: 62  STTYERPDQNY-IVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLE 120
             T +R      ++ T  + APE+     +    D+++ G  ++E+ T E  +   +N  
Sbjct: 161 LATLKRASFAKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSECQNAA 219

Query: 121 HLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQ 175
            +       G  P    K      ++ +        +    R SIK ++     Q
Sbjct: 220 QI-YRRVTSGVKPASFDKVAIPEVKEIIEGC---IRQNKDERYSIKDLLNHAFFQ 270

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 270

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 41.5 bits (97), Expect = 4e-05
 Identities = 7/29 (24%), Positives = 18/29 (62%)

Query: 217 DLTHLLQGLLRYDPTDRLTAREALRHPFF 245
           ++  +++G +R +  +R + ++ L H FF
Sbjct: 241 EVKEIIEGCIRQNKDERYSIKDLLNHAFF 269

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]} Length = 286

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

 Score = 74.5 bits (182), Expect = 2e-16
 Identities = 52/245 (21%), Positives = 82/245 (33%), Gaps = 74/245 (30%)

Query: 2   FAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG 61
            A  HD  ++H DLKP+N+L+     +K+ D+  +         +               
Sbjct: 113 IAYCHDRRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKY--------------- 157

Query: 62  STTYERPDQNYIVSTRHYRAPEVILGLG-WTYPCDIWSVGCILVELCTGEALFQTHENLE 120
                     + + T  YRAP+V++G   ++   DIWSVGCI  E+  G  LF      +
Sbjct: 158 ---------THEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEAD 208

Query: 121 HLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVPFFY 180
            L  + R+LG                       +WP      +   +      L    F 
Sbjct: 209 QLMRIFRILGTPNSK------------------NWPNVTELPKYDPNFTVYEPLPWESFL 250

Query: 181 GSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREAL 240
               E                                   LL  +L+ DP  R+TA++AL
Sbjct: 251 KGLDE-------------------------------SGIDLLSKMLKLDPNQRITAKQAL 279

Query: 241 RHPFF 245
            H +F
Sbjct: 280 EHAYF 284

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 73.5 bits (180), Expect = 5e-16
 Identities = 29/132 (21%), Positives = 53/132 (40%), Gaps = 22/132 (16%)

Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           +H   +IH DLKPEN+LL    +I++ D+ ++     +S   +                 
Sbjct: 124 LHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARA---------------- 167

Query: 65  YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAM 124
                 N  V T  Y +PE++         D+W++GCI+ +L  G   F+          
Sbjct: 168 ------NSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQK 221

Query: 125 MERVLGPLPQHM 136
           + ++    P+  
Sbjct: 222 IIKLEYDFPEKF 233

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.3 bits (86), Expect = 0.001
 Identities = 12/35 (34%), Positives = 14/35 (40%), Gaps = 6/35 (17%)

Query: 217 DLTHLLQGLLRYDPTDRLTAREA------LRHPFF 245
               L++ LL  D T RL   E         HPFF
Sbjct: 236 KARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFF 270

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]} Length = 292

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 73.4 bits (179), Expect = 5e-16
 Identities = 51/247 (20%), Positives = 84/247 (34%), Gaps = 75/247 (30%)

Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
            H   ++H DLKP+N+L+  +  +K+ ++  +         +                  
Sbjct: 117 CHSRNVLHRDLKPQNLLINRNGELKLANFGLARAFGIPVRCY------------------ 158

Query: 65  YERPDQNYIVSTRHYRAPEVILGLGW-TYPCDIWSVGCILVELCTGEA-LFQTHENLEHL 122
                 +  V T  YR P+V+ G    +   D+WS GCI  EL      LF  ++  + L
Sbjct: 159 ------SAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQL 212

Query: 123 AMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVPFFYGS 182
             + R+LG   +                            E   S+ KLP  +    Y +
Sbjct: 213 KRIFRLLGTPTE----------------------------EQWPSMTKLPDYKPYPMYPA 244

Query: 183 FVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRH 242
                                       V         LLQ LL+ +P  R++A EAL+H
Sbjct: 245 TTSLV---------------------NVVPKLNATGRDLLQNLLKCNPVQRISAEEALQH 283

Query: 243 PFFTRDH 249
           P+F+   
Sbjct: 284 PYFSDFC 290

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]} Length = 335

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 72.8 bits (178), Expect = 1e-15
 Identities = 33/152 (21%), Positives = 55/152 (36%), Gaps = 30/152 (19%)

Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           +H + + H D+KPEN+L  S                           ++ +K+ DFG   
Sbjct: 127 LHSINIAHRDVKPENLLYTS------------------------KRPNAILKLTDFGFAK 162

Query: 65  YERPDQNY--IVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHL 122
                 +      T +Y APEV+    +   CD+WS+G I+  L  G   F ++  L   
Sbjct: 163 ETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAIS 222

Query: 123 AMMERVLG----PLPQHMLKRVDRHAEKYVRR 150
             M+  +       P      V    +  +R 
Sbjct: 223 PGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRN 254

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]} Length = 335

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 47.4 bits (112), Expect = 6e-07
 Identities = 10/33 (30%), Positives = 20/33 (60%)

Query: 217 DLTHLLQGLLRYDPTDRLTAREALRHPFFTRDH 249
           ++  L++ LL+ +PT R+T  E + HP+  +  
Sbjct: 247 EVKMLIRNLLKTEPTQRMTITEFMNHPWIMQST 279

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]} Length = 269

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 71.6 bits (175), Expect = 2e-15
 Identities = 35/170 (20%), Positives = 61/170 (35%), Gaps = 36/170 (21%)

Query: 6   HDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTY 65
               ++H DLKP NV L   +                            +K+ DFG    
Sbjct: 131 GGHTVLHRDLKPANVFLDGKQN---------------------------VKLGDFGLARI 163

Query: 66  ERPDQNY---IVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHL 122
              D ++    V T +Y +PE +  + +    DIWS+GC+L ELC     F      E  
Sbjct: 164 LNHDTSFAKAFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKE-- 221

Query: 123 AMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLP 172
            +  ++     + +  R      + + R           R S++ +++ P
Sbjct: 222 -LAGKIREGKFRRIPYRYSDELNEIITRM---LNLKDYHRPSVEEILENP 267

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]} Length = 269

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.2 bits (91), Expect = 2e-04
 Identities = 6/28 (21%), Positives = 12/28 (42%)

Query: 217 DLTHLLQGLLRYDPTDRLTAREALRHPF 244
           +L  ++  +L      R +  E L +P 
Sbjct: 241 ELNEIITRMLNLKDYHRPSVEEILENPL 268

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 71.9 bits (176), Expect = 2e-15
 Identities = 30/146 (20%), Positives = 55/146 (37%), Gaps = 25/146 (17%)

Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           +H   +IH D+K +N+LL     +K+ D+        + S    M               
Sbjct: 132 LHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTM--------------- 176

Query: 65  YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAM 124
                    V T ++ APEV+    +    DIWS+G + +E+  GE  +     L  L +
Sbjct: 177 ---------VGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYL 227

Query: 125 MERVLGPLPQHMLKRVDRHAEKYVRR 150
           +    G       +++      ++ R
Sbjct: 228 IAT-NGTPELQNPEKLSAIFRDFLNR 252

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 42.7 bits (100), Expect = 2e-05
 Identities = 9/33 (27%), Positives = 12/33 (36%)

Query: 217 DLTHLLQGLLRYDPTDRLTAREALRHPFFTRDH 249
                L   L  D   R +A+E L+H F     
Sbjct: 245 IFRDFLNRCLDMDVEKRGSAKELLQHQFLKIAK 277

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 271

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 71.2 bits (174), Expect = 3e-15
 Identities = 27/147 (18%), Positives = 54/147 (36%), Gaps = 24/147 (16%)

Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           +H + + H D+KPEN+LL   + +K+ D+  +     ++                     
Sbjct: 119 LHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNN--------------------- 157

Query: 65  YERPDQNYIVSTRHYRAPEVILGLGW-TYPCDIWSVGCILVELCTGEALFQTHENLEHLA 123
                 N +  T  Y APE++    +   P D+WS G +L  +  GE  +    +     
Sbjct: 158 -RERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQE- 215

Query: 124 MMERVLGPLPQHMLKRVDRHAEKYVRR 150
             +        +  K++D      + +
Sbjct: 216 YSDWKEKKTYLNPWKKIDSAPLALLHK 242

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 271

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 45.0 bits (106), Expect = 3e-06
 Identities = 6/32 (18%), Positives = 15/32 (46%)

Query: 217 DLTHLLQGLLRYDPTDRLTAREALRHPFFTRD 248
               LL  +L  +P+ R+T  +  +  ++ + 
Sbjct: 235 APLALLHKILVENPSARITIPDIKKDRWYNKP 266

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

 Score = 69.8 bits (170), Expect = 9e-15
 Identities = 21/135 (15%), Positives = 46/135 (34%), Gaps = 32/135 (23%)

Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG--- 61
           +H+  +++ D+KP+N L+                             ++ I V+DFG   
Sbjct: 117 IHEKSLVYRDIKPDNFLIGR----------------------PNSKNANMIYVVDFGMVK 154

Query: 62  -------STTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQ 114
                         ++  +  T  Y +    LG   +   D+ ++G + +    G   +Q
Sbjct: 155 FYRDPVTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQ 214

Query: 115 THENLEHLAMMERVL 129
             +   +    ER+ 
Sbjct: 215 GLKAATNKQKYERIG 229

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 70.0 bits (171), Expect = 1e-14
 Identities = 32/133 (24%), Positives = 51/133 (38%), Gaps = 31/133 (23%)

Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           +H   MIH D+K  N+LL                                +K+ DFGS +
Sbjct: 131 LHSHNMIHRDVKAGNILLSEPGL---------------------------VKLGDFGSAS 163

Query: 65  YERPDQNYIVSTRHYRAPEVILGLG---WTYPCDIWSVGCILVELCTGEALFQTHENLEH 121
              P  ++ V T ++ APEVIL +    +    D+WS+G   +EL   +        +  
Sbjct: 164 IMAPANSF-VGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSA 222

Query: 122 LAMMERVLGPLPQ 134
           L  + +   P  Q
Sbjct: 223 LYHIAQNESPALQ 235

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 45.4 bits (107), Expect = 2e-06
 Identities = 9/33 (27%), Positives = 15/33 (45%)

Query: 217 DLTHLLQGLLRYDPTDRLTAREALRHPFFTRDH 249
              + +   L+  P DR T+   L+H F  R+ 
Sbjct: 242 YFRNFVDSCLQKIPQDRPTSEVLLKHRFVLRER 274

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

 Score = 68.9 bits (168), Expect = 2e-14
 Identities = 31/146 (21%), Positives = 47/146 (32%), Gaps = 19/146 (13%)

Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           +H L ++H DLKPEN+LL     IK+ D+  S                     +D G   
Sbjct: 126 LHKLNIVHRDLKPENILLDDDMNIKLTDFGFS-------------------CQLDPGEKL 166

Query: 65  YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAM 124
            E       ++             G+    D+WS G I+  L  G   F   + +  L M
Sbjct: 167 REVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRM 226

Query: 125 MERVLGPLPQHMLKRVDRHAEKYVRR 150
           +                   +  V R
Sbjct: 227 IMSGNYQFGSPEWDDYSDTVKDLVSR 252

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

 Score = 43.9 bits (103), Expect = 6e-06
 Identities = 13/31 (41%), Positives = 16/31 (51%)

Query: 217 DLTHLLQGLLRYDPTDRLTAREALRHPFFTR 247
            +  L+   L   P  R TA EAL HPFF +
Sbjct: 245 TVKDLVSRFLVVQPQKRYTAEEALAHPFFQQ 275

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 276

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 68.5 bits (167), Expect = 3e-14
 Identities = 28/174 (16%), Positives = 59/174 (33%), Gaps = 30/174 (17%)

Query: 2   FAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG 61
              +H   +IH DLK  N+ L     +K+ D+  +    + S   +              
Sbjct: 117 MDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQF------------- 163

Query: 62  STTYERPDQNYIVSTRHYRAPEVILGLG---WTYPCDIWSVGCILVELCTGEALFQTHEN 118
                      +  +  + APEVI       +++  D+++ G +L EL TG+  +    N
Sbjct: 164 ---------EQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINN 214

Query: 119 LEHLAMM--ERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMK 170
            + +  M     L P    +     +  ++ +        +    R     ++ 
Sbjct: 215 RDQIIFMVGRGYLSPDLSKVRSNCPKAMKRLMAEC---LKKKRDERPLFPQILA 265

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 316

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 67.8 bits (165), Expect = 5e-14
 Identities = 30/136 (22%), Positives = 46/136 (33%), Gaps = 27/136 (19%)

Query: 1   MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDF 60
               +H   +I+ DLKPEN+LL  + +                           IK+ DF
Sbjct: 116 ALEYLHSKDIIYRDLKPENILLDKNGH---------------------------IKITDF 148

Query: 61  GSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLE 120
           G   Y       +  T  Y APEV+    +    D WS G ++ E+  G   F     ++
Sbjct: 149 GFAKYVPDVTYTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMK 208

Query: 121 HLAMMERVLGPLPQHM 136
               +       P   
Sbjct: 209 TYEKILNAELRFPPFF 224

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 316

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 36.6 bits (84), Expect = 0.002
 Identities = 10/34 (29%), Positives = 15/34 (44%), Gaps = 5/34 (14%)

Query: 217 DLTHLLQGLLRYDPTDRL-----TAREALRHPFF 245
           D+  LL  L+  D + RL        +   HP+F
Sbjct: 227 DVKDLLSRLITRDLSQRLGNLQNGTEDVKNHPWF 260

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 307

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 67.4 bits (164), Expect = 9e-14
 Identities = 35/148 (23%), Positives = 55/148 (37%), Gaps = 26/148 (17%)

Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           +HDL ++H DLKPEN+L  S                        + + S I + DFG + 
Sbjct: 123 LHDLGIVHRDLKPENLLYYS------------------------LDEDSKIMISDFGLSK 158

Query: 65  YERPDQNY--IVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHL 122
            E P         T  Y APEV+    ++   D WS+G I   L  G   F    + +  
Sbjct: 159 MEDPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLF 218

Query: 123 AMMERVLGPLPQHMLKRVDRHAEKYVRR 150
             + +            +   A+ ++R 
Sbjct: 219 EQILKAEYEFDSPYWDDISDSAKDFIRH 246

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 307

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 45.8 bits (108), Expect = 2e-06
 Identities = 10/32 (31%), Positives = 16/32 (50%)

Query: 217 DLTHLLQGLLRYDPTDRLTAREALRHPFFTRD 248
                ++ L+  DP  R T  +AL+HP+   D
Sbjct: 239 SAKDFIRHLMEKDPEKRFTCEQALQHPWIAGD 270

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 67.2 bits (163), Expect = 1e-13
 Identities = 25/150 (16%), Positives = 50/150 (33%), Gaps = 18/150 (12%)

Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           +H    IH D+KP+N L+   +   +           D    K+   +   + I +    
Sbjct: 119 IHSKNFIHRDVKPDNFLMGLGKKGNLVYII-------DFGLAKKYRDARTHQHIPYRENK 171

Query: 65  YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAM 124
                   +  T  Y +    LG+  +   D+ S+G +L+    G   +Q  +       
Sbjct: 172 N-------LTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQK 224

Query: 125 MERV----LGPLPQHMLKRVDRHAEKYVRR 150
            ER+    +    + + K        Y+  
Sbjct: 225 YERISEKKMSTPIEVLCKGYPSEFATYLNF 254

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 66.2 bits (161), Expect = 2e-13
 Identities = 29/151 (19%), Positives = 55/151 (36%), Gaps = 30/151 (19%)

Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           +HD  +IH DLK  N+L      IK+ D+  S    +                       
Sbjct: 126 LHDNKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQRR------------------ 167

Query: 65  YERPDQNYIVSTRHYRAPEVILGL-----GWTYPCDIWSVGCILVELCTGEALFQTHENL 119
                 +  + T ++ APEV++        + Y  D+WS+G  L+E+   E        +
Sbjct: 168 ------DSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPM 221

Query: 120 EHLAMMERVLGPLPQHMLKRVDRHAEKYVRR 150
             L  + +   P       R   + + ++++
Sbjct: 222 RVLLKIAKSEPPTLAQP-SRWSSNFKDFLKK 251

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 45.7 bits (108), Expect = 2e-06
 Identities = 10/32 (31%), Positives = 15/32 (46%)

Query: 217 DLTHLLQGLLRYDPTDRLTAREALRHPFFTRD 248
           +    L+  L  +   R T  + L+HPF T D
Sbjct: 244 NFKDFLKKCLEKNVDARWTTSQLLQHPFVTVD 275

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]} Length = 364

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 64.8 bits (157), Expect = 9e-13
 Identities = 28/148 (18%), Positives = 57/148 (38%), Gaps = 30/148 (20%)

Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG-ST 63
           MH+  +++ DLKP N+LL    +                           +++ D G + 
Sbjct: 123 MHNRFVVYRDLKPANILLDEHGH---------------------------VRISDLGLAC 155

Query: 64  TYERPDQNYIVSTRHYRAPEVIL-GLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHL 122
            + +   +  V T  Y APEV+  G+ +    D +S+GC+L +L  G + F+     +  
Sbjct: 156 DFSKKKPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFR-QHKTKDK 214

Query: 123 AMMERVLGPLPQHMLKRVDRHAEKYVRR 150
             ++R+   +   +           +  
Sbjct: 215 HEIDRMTLTMAVELPDSFSPELRSLLEG 242

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]} Length = 364

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 37.8 bits (87), Expect = 8e-04
 Identities = 14/34 (41%), Positives = 18/34 (52%), Gaps = 5/34 (14%)

Query: 217 DLTHLLQGLLRYDPTDRLT-----AREALRHPFF 245
           +L  LL+GLL+ D   RL      A+E    PFF
Sbjct: 235 ELRSLLEGLLQRDVNRRLGCLGRGAQEVKESPFF 268

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]} Length = 320

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 64.4 bits (156), Expect = 1e-12
 Identities = 28/132 (21%), Positives = 50/132 (37%), Gaps = 24/132 (18%)

Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           +H   +++ DLK +N+LL    +IK+ D+          +                    
Sbjct: 119 LHSKGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKT------------------ 160

Query: 65  YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAM 124
                 N    T  Y APE++LG  + +  D WS G +L E+  G++ F   +  E    
Sbjct: 161 ------NTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHS 214

Query: 125 MERVLGPLPQHM 136
           +       P+ +
Sbjct: 215 IRMDNPFYPRWL 226

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]} Length = 320

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.8 bits (87), Expect = 8e-04
 Identities = 10/30 (33%), Positives = 14/30 (46%), Gaps = 1/30 (3%)

Query: 217 DLTHLLQGLLRYDPTDRLTAR-EALRHPFF 245
           +   LL  L   +P  RL  R +  +HP F
Sbjct: 229 EAKDLLVKLFVREPEKRLGVRGDIRQHPLF 258

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score = 63.6 bits (154), Expect = 1e-12
 Identities = 28/146 (19%), Positives = 53/146 (36%), Gaps = 21/146 (14%)

Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
            H   +IH D+KP N+++ ++  +KV D+  +       +   +                
Sbjct: 127 SHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQT--------------- 171

Query: 65  YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAM 124
                   ++ T  Y +PE   G       D++S+GC+L E+ TGE  F     +     
Sbjct: 172 ------AAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQ 225

Query: 125 MERVLGPLPQHMLKRVDRHAEKYVRR 150
             R     P    + +    +  V +
Sbjct: 226 HVREDPIPPSARHEGLSADLDAVVLK 251

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]} Length = 262

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 63.5 bits (154), Expect = 1e-12
 Identities = 30/166 (18%), Positives = 53/166 (31%), Gaps = 32/166 (19%)

Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           +     +H DL   NVL+                            + +  KV DFG T 
Sbjct: 119 LEGNNFVHRDLAARNVLV---------------------------SEDNVAKVSDFGLTK 151

Query: 65  YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAM 124
                Q+       + APE +    ++   D+WS G +L E+ +   +      L+ +  
Sbjct: 152 EASSTQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDV-- 209

Query: 125 MERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMK 170
           + RV                 + ++     W   AA R S   + +
Sbjct: 210 VPRVEKGYKMDAPDGCPPAVYEVMKNC---WHLDAAMRPSFLQLRE 252

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 64.1 bits (155), Expect = 2e-12
 Identities = 32/136 (23%), Positives = 51/136 (37%), Gaps = 27/136 (19%)

Query: 1   MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDF 60
            F  +H L +I+ DLKPEN+L+    Y                           I+V DF
Sbjct: 153 TFEYLHSLDLIYRDLKPENLLIDQQGY---------------------------IQVTDF 185

Query: 61  GSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLE 120
           G     +     +  T    APE+IL  G+    D W++G ++ E+  G   F   + ++
Sbjct: 186 GFAKRVKGRTWTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ 245

Query: 121 HLAMMERVLGPLPQHM 136
               +       P H 
Sbjct: 246 IYEKIVSGKVRFPSHF 261

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 62.4 bits (151), Expect = 4e-12
 Identities = 25/171 (14%), Positives = 52/171 (30%), Gaps = 28/171 (16%)

Query: 1   MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDF 60
             A +  +  +H DL+  N+L+  +   KV D+  +     +    ++            
Sbjct: 125 GMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQG----------- 173

Query: 61  GSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLE 120
                             + APE  L   +T   D+WS G +L EL T   +        
Sbjct: 174 ------------AKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNR 221

Query: 121 HLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKL 171
            +  +++V                   + +    W +    R + + +   
Sbjct: 222 EV--LDQVERGYRMPCPPECPESLHDLMCQC---WRKEPEERPTFEYLQAF 267

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 337

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 62.5 bits (151), Expect = 5e-12
 Identities = 23/134 (17%), Positives = 46/134 (34%), Gaps = 24/134 (17%)

Query: 3   AVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGS 62
             +H   +++ D+K EN++L    +IK+ D+        D +                  
Sbjct: 119 EYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATM---------------- 162

Query: 63  TTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHL 122
                        T  Y APEV+    +    D W +G ++ E+  G   F   ++    
Sbjct: 163 --------KTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLF 214

Query: 123 AMMERVLGPLPQHM 136
            ++       P+ +
Sbjct: 215 ELILMEEIRFPRTL 228

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 337

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.2 bits (88), Expect = 5e-04
 Identities = 14/34 (41%), Positives = 18/34 (52%), Gaps = 5/34 (14%)

Query: 217 DLTHLLQGLLRYDPTDRL-----TAREALRHPFF 245
           +   LL GLL+ DP  RL      A+E + H FF
Sbjct: 231 EAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFF 264

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]} Length = 303

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 62.2 bits (150), Expect = 5e-12
 Identities = 32/173 (18%), Positives = 61/173 (35%), Gaps = 32/173 (18%)

Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
                + H DLK +N+L+  +    + D                      + V    +T 
Sbjct: 124 QGKPAIAHRDLKSKNILVKKNGTCCIADL--------------------GLAVRHDSATD 163

Query: 65  YERPDQNYIVSTRHYRAPEVILG------LGWTYPCDIWSVGCILVELCTGEALFQTHEN 118
                 N+ V T+ Y APEV+               DI+++G +  E+    ++   HE+
Sbjct: 164 TIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHED 223

Query: 119 LEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKL 171
            +          P  + M K V        ++ R + P    S E+++ + K+
Sbjct: 224 YQLPYYDLVPSDPSVEEMRKVVCE------QKLRPNIPNRWQSCEALRVMAKI 270

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 61.7 bits (149), Expect = 9e-12
 Identities = 21/121 (17%), Positives = 35/121 (28%), Gaps = 20/121 (16%)

Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           +     +H DL   N +L     +KV D+  +                +           
Sbjct: 146 LASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGA----------- 194

Query: 65  YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAM 124
                         + A E +    +T   D+WS G +L EL T  A      N   + +
Sbjct: 195 ---------KLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITV 245

Query: 125 M 125
            
Sbjct: 246 Y 246

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 283

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 60.2 bits (145), Expect = 2e-11
 Identities = 25/142 (17%), Positives = 45/142 (31%), Gaps = 23/142 (16%)

Query: 1   MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDF 60
               + ++  +H DL   N+L+ S+   KV D+  S     D                  
Sbjct: 122 GMKYLANMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTT----------- 170

Query: 61  GSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLE 120
                     +       + APE I    +T   D+WS G ++ E+ T         +  
Sbjct: 171 ----------SGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNH 220

Query: 121 HL--AMMERVLGPLPQHMLKRV 140
            +  A+ +    P P      +
Sbjct: 221 EVMKAINDGFRLPTPMDCPSAI 242

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 59.7 bits (144), Expect = 3e-11
 Identities = 25/117 (21%), Positives = 43/117 (36%), Gaps = 28/117 (23%)

Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG-ST 63
            H+  ++H D+K EN+L+  +                             +K+IDFG   
Sbjct: 126 CHNCGVLHRDIKDENILIDLNRGE--------------------------LKLIDFGSGA 159

Query: 64  TYERPDQNYIVSTRHYRAPEVILGLG-WTYPCDIWSVGCILVELCTGEALFQTHENL 119
             +         TR Y  PE I           +WS+G +L ++  G+  F+  E +
Sbjct: 160 LLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEI 216

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 42.0 bits (98), Expect = 3e-05
 Identities = 10/29 (34%), Positives = 15/29 (51%)

Query: 217 DLTHLLQGLLRYDPTDRLTAREALRHPFF 245
           +  HL++  L   P+DR T  E   HP+ 
Sbjct: 230 ECQHLIRWCLALRPSDRPTFEEIQNHPWM 258

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 58.9 bits (142), Expect = 5e-11
 Identities = 25/166 (15%), Positives = 56/166 (33%), Gaps = 28/166 (16%)

Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           + + C+IH DL   N L+  ++ IKV D+  +     D                      
Sbjct: 117 LEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTG--------------- 161

Query: 65  YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAM 124
                         + +PEV     ++   D+WS G ++ E+ +   +   + +   +  
Sbjct: 162 --------TKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEV-- 211

Query: 125 MERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMK 170
           +E +      +  +    H  + +      W E    R +   +++
Sbjct: 212 VEDISTGFRLYKPRLASTHVYQIMNHC---WKERPEDRPAFSRLLR 254

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]} Length = 272

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 58.1 bits (140), Expect = 1e-10
 Identities = 24/167 (14%), Positives = 50/167 (29%), Gaps = 28/167 (16%)

Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           + +   IH DL+  N+L+  +   K+ D+  +     +    +                 
Sbjct: 125 IEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREG--------------- 169

Query: 65  YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAM 124
                         + APE I    +T   D+WS G +L E+ T   +         +  
Sbjct: 170 --------AKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEV-- 219

Query: 125 MERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKL 171
           ++ +                 + +R     W E    R +   +  +
Sbjct: 220 IQNLERGYRMVRPDNCPEELYQLMRLC---WKERPEDRPTFDYLRSV 263

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 58.2 bits (140), Expect = 1e-10
 Identities = 32/176 (18%), Positives = 59/176 (33%), Gaps = 30/176 (17%)

Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           + +   +H DL   NVLLV+  Y K+ D+  S     D +Y+K                 
Sbjct: 123 LEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQ--------------- 167

Query: 65  YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVE-LCTGEALFQTHENLEHLA 123
                  +      + APE I    ++   D+WS G ++ E    G+  ++  +  E   
Sbjct: 168 ------THGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSE--- 218

Query: 124 MMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVPFF 179
           +   +             R     +      W     +R    +V    RL+  ++
Sbjct: 219 VTAMLEKGERMGCPAGCPREMYDLMNLC---WTYDVENRPGFAAVEL--RLRNYYY 269

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 57.5 bits (138), Expect = 2e-10
 Identities = 24/134 (17%), Positives = 49/134 (36%), Gaps = 22/134 (16%)

Query: 2   FAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG 61
              +     IH DL   N+LL + + +K+ D+      P++  ++               
Sbjct: 124 MGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVM------------- 170

Query: 62  STTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHENLE 120
                   Q +      + APE +    +++  D W  G  L E+ T G+  +      +
Sbjct: 171 --------QEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQ 222

Query: 121 HLAMMERVLGPLPQ 134
            L  +++    LP+
Sbjct: 223 ILHKIDKEGERLPR 236

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 325

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 57.9 bits (139), Expect = 2e-10
 Identities = 24/139 (17%), Positives = 46/139 (33%), Gaps = 25/139 (17%)

Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           +     +H DL   NVL+   + +K+ D+  +     DS+Y  R                
Sbjct: 180 LEFKSCVHRDLAARNVLVTHGKVVKICDFGLARDIMSDSNYVVRG--------------- 224

Query: 65  YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHENLEHLA 123
                         + APE +    +T   D+WS G +L E+ + G   +       +  
Sbjct: 225 -------NARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGIPVDANFY 277

Query: 124 MM--ERVLGPLPQHMLKRV 140
            +         P +  + +
Sbjct: 278 KLIQNGFKMDQPFYATEEI 296

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 301

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 57.6 bits (138), Expect = 2e-10
 Identities = 20/138 (14%), Positives = 43/138 (31%), Gaps = 24/138 (17%)

Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           + +   +H DL   N L+  +  +K+ D+  S +      Y                   
Sbjct: 156 LSERKFVHRDLATRNCLVGENMVVKIADFGLSRNIYSADYYKADGN-------------- 201

Query: 65  YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHL-- 122
                         +  PE I    +T   D+W+ G +L E+ +           E +  
Sbjct: 202 --------DAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYGMAHEEVIY 253

Query: 123 AMMERVLGPLPQHMLKRV 140
            + +  +   P++    +
Sbjct: 254 YVRDGNILACPENCPLEL 271

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 317

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 55.2 bits (132), Expect = 1e-09
 Identities = 24/138 (17%), Positives = 47/138 (34%), Gaps = 24/138 (17%)

Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           + D  ++H DL   NVL+ + +++K+ D+  +     +   +                  
Sbjct: 127 LEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA---------------- 170

Query: 65  YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAM 124
                         + A E IL   +T+  D+WS G  + EL T  +          ++ 
Sbjct: 171 ------EGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISS 224

Query: 125 M--ERVLGPLPQHMLKRV 140
           +  +    P P      V
Sbjct: 225 ILEKGERLPQPPICTIDV 242

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 54.8 bits (131), Expect = 2e-09
 Identities = 19/118 (16%), Positives = 33/118 (27%), Gaps = 25/118 (21%)

Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           +     IH DL   N+L+  +   K+ D+  S                            
Sbjct: 143 LSQKQFIHRDLAARNILVGENYVAKIADFGLSRGQEVYVK-------------------- 182

Query: 65  YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHL 122
                +        + A E +    +T   D+WS G +L E+ +             L
Sbjct: 183 -----KTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAEL 235

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 54.4 bits (130), Expect = 2e-09
 Identities = 26/130 (20%), Positives = 50/130 (38%), Gaps = 20/130 (15%)

Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           + D+  +H DL   N+L+ S+   KV D+  S                   + ++  ++ 
Sbjct: 144 LADMNYVHRDLAARNILVNSNLVCKVSDFGLS-------------------RFLEDDTSD 184

Query: 65  YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHENLEHLA 123
                         + APE I    +T   D+WS G ++ E+ + GE  +    N + + 
Sbjct: 185 PTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMTNQDVIN 244

Query: 124 MMERVLGPLP 133
            +E+     P
Sbjct: 245 AIEQDYRLPP 254

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 54.4 bits (130), Expect = 3e-09
 Identities = 29/169 (17%), Positives = 53/169 (31%), Gaps = 26/169 (15%)

Query: 3   AVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGS 62
           A +     IH DL   N+LL      K+ D+  +     DS+Y                 
Sbjct: 159 AFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVV--------------- 203

Query: 63  TTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHL 122
                  +        + APE I    +T+  D+WS G  L EL +  +       ++  
Sbjct: 204 -------KGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSK 256

Query: 123 AMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKL 171
              + +         +         ++     W      R + K +++L
Sbjct: 257 -FYKMIKEGFRMLSPEHAPAEMYDIMKTC---WDADPLKRPTFKQIVQL 301

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]} Length = 287

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 54.0 bits (129), Expect = 3e-09
 Identities = 23/138 (16%), Positives = 44/138 (31%), Gaps = 25/138 (18%)

Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           +     IH DL   N L+  +  +KV D+  S     D+                     
Sbjct: 131 LEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYT------------------- 171

Query: 65  YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHL-- 122
                         + APE +    ++   D+W+ G +L E+ T         +L  +  
Sbjct: 172 ----AHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYE 227

Query: 123 AMMERVLGPLPQHMLKRV 140
            + +      P+   ++V
Sbjct: 228 LLEKDYRMERPEGCPEKV 245

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]} Length = 258

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 53.5 bits (128), Expect = 4e-09
 Identities = 24/140 (17%), Positives = 47/140 (33%), Gaps = 25/140 (17%)

Query: 3   AVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGS 62
             +     +H DL   N L+     +KV D+  S +   D                    
Sbjct: 114 EYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVG------------- 160

Query: 63  TTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHENLEH 121
                           +  PEV++   ++   DIW+ G ++ E+ + G+  ++   N E 
Sbjct: 161 ----------SKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSET 210

Query: 122 LAMMERVL-GPLPQHMLKRV 140
              + + L    P    ++V
Sbjct: 211 AEHIAQGLRLYRPHLASEKV 230

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 53.2 bits (127), Expect = 5e-09
 Identities = 34/177 (19%), Positives = 61/177 (34%), Gaps = 32/177 (18%)

Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           + +   +H DL   NVLLV+  Y K+ D+  S     D SY+                  
Sbjct: 125 LEEKNFVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTAR--------------- 169

Query: 65  YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVE-LCTGEALFQTHENLEHLA 123
                 +       + APE I    ++   D+WS G  + E L  G+  ++  +  E +A
Sbjct: 170 ------SAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMA 223

Query: 124 MMERVL-GPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVPFF 179
            +E+      P      +              W      R    +V +  R++  ++
Sbjct: 224 FIEQGKRMECPPECPPELYALMSDC-------WIYKWEDRPDFLTVEQ--RMRACYY 271

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 308

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 51.4 bits (122), Expect = 2e-08
 Identities = 32/180 (17%), Positives = 59/180 (32%), Gaps = 24/180 (13%)

Query: 3   AVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGS 62
           A ++    +H DL   N ++     +K+ D+  +    +   Y K               
Sbjct: 147 AYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGK------------ 194

Query: 63  TTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHL 122
                      +    + +PE +    +T   D+WS G +L E+ T         + E +
Sbjct: 195 ----------GLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQV 244

Query: 123 --AMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQVPFFY 180
              +ME  L   P +    +        +      P       SIK  M+    +V F+Y
Sbjct: 245 LRFVMEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEMEPGFREVSFYY 304

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 51.0 bits (121), Expect = 3e-08
 Identities = 26/138 (18%), Positives = 43/138 (31%), Gaps = 24/138 (17%)

Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           +     IH DL   NVL+     +K+ D+  +        Y K                 
Sbjct: 151 LASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTT--------------- 195

Query: 65  YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHL-- 122
                         + APE +    +T+  D+WS G +L E+ T          +E L  
Sbjct: 196 -------NGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFK 248

Query: 123 AMMERVLGPLPQHMLKRV 140
            + E      P +    +
Sbjct: 249 LLKEGHRMDKPSNCTNEL 266

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 50.6 bits (120), Expect = 5e-08
 Identities = 32/148 (21%), Positives = 56/148 (37%), Gaps = 25/148 (16%)

Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           +H L +I+ D+K EN+LL S+ ++ + D+  S                            
Sbjct: 145 LHKLGIIYRDIKLENILLDSNGHVVLTDFGLSKEF-----------------------VA 181

Query: 65  YERPDQNYIVSTRHYRAPEVILGL--GWTYPCDIWSVGCILVELCTGEALFQTHENLEHL 122
            E         T  Y AP+++ G   G     D WS+G ++ EL TG + F         
Sbjct: 182 DETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQ 241

Query: 123 AMMERVLGPLPQHMLKRVDRHAEKYVRR 150
           A + R +        + +   A+  ++R
Sbjct: 242 AEISRRILKSEPPYPQEMSALAKDLIQR 269

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.7 bits (84), Expect = 0.002
 Identities = 13/34 (38%), Positives = 14/34 (41%), Gaps = 5/34 (14%)

Query: 217 DLTHLLQGLLRYDPTDRL-----TAREALRHPFF 245
               L+Q LL  DP  RL      A E   H FF
Sbjct: 262 LAKDLIQRLLMKDPKKRLGCGPRDADEIKEHLFF 295

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 49.8 bits (118), Expect = 6e-08
 Identities = 22/148 (14%), Positives = 43/148 (29%), Gaps = 25/148 (16%)

Query: 3   AVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGS 62
           A +     +H D+   NVL+ S++ +K+ D+  S +    + Y                 
Sbjct: 122 AYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASK------------- 168

Query: 63  TTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHL 122
                           + APE I    +T   D+W  G  + E+               +
Sbjct: 169 ----------GKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDV 218

Query: 123 AMMERVLGPLPQHMLKRVDRHAEKYVRR 150
             + R+       M           + +
Sbjct: 219 --IGRIENGERLPMPPNCPPTLYSLMTK 244

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 49.5 bits (117), Expect = 1e-07
 Identities = 25/130 (19%), Positives = 42/130 (32%), Gaps = 22/130 (16%)

Query: 5   MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 64
           +     IH DL   N+LL     +K+ D+  +    KD  Y ++                
Sbjct: 150 LASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRK---------------- 193

Query: 65  YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAM 124
                         + APE I    +T   D+WS G +L E+ +  A       ++    
Sbjct: 194 ------GDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFC 247

Query: 125 MERVLGPLPQ 134
                G   +
Sbjct: 248 RRLKEGTRMR 257

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	252
d1blxa_	305	Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [T	100.0
d2j4za1	263	Aurora-related kinase 1 (aurora-2) {Human (Homo sa	100.0
d1ua2a_	299	Cell division protein kinase 7, CDK7 {Human (Homo	100.0
d1yhwa1	293	pak1 {Human (Homo sapiens) [TaxId: 9606]}	100.0
d1nvra_	271	Cell cycle checkpoint kinase chk1 {Human (Homo sap	100.0
d1cm8a_	346	MAP kinase p38-gamma {Human (Homo sapiens) [TaxId:	100.0
d1s9ja_	322	Dual specificity mitogen-activated protein kinase	100.0
d1fota_	316	cAMP-dependent PK, catalytic subunit {Baker's yeas	100.0
d1rdqe_	350	cAMP-dependent PK, catalytic subunit {Mouse (Mus m	100.0
d1a06a_	307	Calmodulin-dependent protein kinase {Rat (Rattus n	100.0
d1koaa2	350	Twitchin, kinase domain {Caenorhabditis elegans, p	100.0
d1t4ha_	270	Protein kinase wnk1 {Human (Homo sapiens) [TaxId:	100.0
d1koba_	352	Twitchin, kinase domain {California sea hare (Aply	100.0
d2jfla1	288	STE20-like serine/threonine-protein kinase, SLK {H	100.0
d1uu3a_	288	3-phosphoinositide dependent protein kinase-1 Pdk1	100.0
d1jksa_	293	Death-associated protein kinase, Dap {Human (Homo	100.0
d1o6la_	337	Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9	100.0
d3blha1	318	Cell division protein kinase 9, CDK9 {Human (Homo	100.0
d1u5ra_	309	Serine/threonine protein kinase TAO2 {Rat (Rattus	100.0
d1q5ka_	350	Glycogen synthase kinase-3 beta (Gsk3b) {Human (Ho	100.0
d1gz8a_	298	Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [T	100.0
d1ob3a_	286	Cyclin-dependent PK, CDK2 {(Plasmodium falciparum)	100.0
d2java1	269	Serine/threonine-protein kinase Nek2 {Human (Homo	100.0
d1omwa3	364	G-protein coupled receptor kinase 2 {Cow (Bos taur	100.0
d2b1pa1	355	c-jun N-terminal kinase (jnk3s) {Human (Homo sapie	100.0
d2gfsa1	348	MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]	100.0
d1xjda_	320	Protein kinase C, theta type {Human (Homo sapiens)	100.0
d1pmea_	345	MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606	100.0
d1xwsa_	273	Proto-oncogene serine/threonine-protein kinase Pim	100.0
d2ozaa1	335	MAP kinase activated protein kinase 2, mapkap2 {Hu	100.0
d1tkia_	321	Titin, kinase domain {Human (Homo sapiens) [TaxId:	100.0
d3bqca1	328	Protein kinase CK2, alpha subunit {Rattus norvegic	100.0
d1phka_	277	gamma-subunit of glycogen phosphorylase kinase (Ph	100.0
d1q8ya_	362	Sky1p {Baker's yeast (Saccharomyces cerevisiae) [T	100.0
d1unla_	292	Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [T	100.0
d1uwha_	276	B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}	100.0
d1rjba_	325	Fl cytokine receptor {Human (Homo sapiens) [TaxId:	100.0
d1ywna1	299	Vascular endothelial growth factor receptor 2 (kdr	100.0
d1xbba_	277	Tyrosine-protein kinase SYK {Human (Homo sapiens)	99.98
d1qpca_	272	Lymphocyte kinase (lck) {Human (Homo sapiens) [Tax	99.98
d1jpaa_	299	ephb2 receptor tyrosine kinase {Mouse (Mus musculu	99.98
d1vzoa_	322	Ribosomal protein S6 kinase alpha 5, Msk1 {Human (	99.97
d1u59a_	285	Tyrosine-protein kinase ZAP-70 {Human (Homo sapien	99.97
d1sm2a_	263	Tyrosine-protein kinase Itk/Tsk {Human (Homo sapie	99.97
d1k2pa_	258	Bruton's tyrosine kinase (Btk) {Human (Homo sapien	99.97
d1opja_	287	Abelsone tyrosine kinase (abl) {Mouse (Mus musculu	99.97
d1mqba_	283	epha2 receptor tyrosine kinase {Human (Homo sapien	99.97
d1xkka_	317	EGF receptor tyrosine kinase, Erbb-1 {Human (Homo	99.97
d1mp8a_	273	Focal adhesion kinase 1 (fak) {Human (Homo sapiens	99.97
d1fmka3	285	c-src tyrosine kinase {Human (Homo sapiens) [TaxId	99.97
d1o6ya_	277	Mycobacterial protein kinase PknB, catalytic domai	99.97
d1u46a_	273	Activated CDC42 kinase 1, ACK1 {Human (Homo sapien	99.97
d1lufa_	301	Musk tyrosine kinase {Rat (Rattus norvegicus) [Tax	99.97
d1fgka_	299	Fibroblast growth factor receptor 1 {Human (Homo s	99.97
d1byga_	262	Carboxyl-terminal src kinase (csk) {Human (Homo sa	99.97
d1ckia_	299	Casein kinase-1, CK1 {Rat (Rattus norvegicus) [Tax	99.96
d1t46a_	311	c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]	99.96
d1p4oa_	308	Insulin-like growth factor 1 receptor {Human (Homo	99.96
d1fvra_	309	Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}	99.96
d1r0pa_	311	Hepatocyte growth factor receptor, c-MET {Human (H	99.96
d1csna_	293	Casein kinase-1, CK1 {Fission yeast (Schizosacchar	99.95
d1vjya_	303	Type I TGF-beta receptor R4 {Human (Homo sapiens)	99.95
d1zara2	191	Rio2 serine protein kinase C-terminal domain {Arch	99.14
d2ppqa1	316	Homoserine kinase ThrB {Agrobacterium tumefaciens	92.0
d1j7la_	263	Type IIIa 3',5"-aminoglycoside phosphotransferase	88.06
d1nd4a_	255	Aminoglycoside 3'-phosphotransferase IIa (Kanamyci	86.61
d2pula1	392	Methylthioribose kinase MtnK {Bacillus subtilis [T	85.27
d1zyla1	325	RdoA {Escherichia coli [TaxId: 562]}	82.09

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.9e-39  Score=264.47  Aligned_cols=172  Identities=31%  Similarity=0.515  Sum_probs=128.6

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCC--CCccccCCC
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD--QNYIVSTRH   78 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~--~~~~~~t~~   78 (252)
                      ||+|||++|||||||||+|||++.                           .+.+|++|||.+......  .....||+.
T Consensus       128 aL~yLH~~~ivHrDiKp~NILi~~---------------------------~~~~kl~dfg~~~~~~~~~~~~~~~gT~~  180 (305)
T d1blxa_         128 GLDFLHSHRVVHRDLKPQNILVTS---------------------------SGQIKLADFGLARIYSFQMALTSVVVTLW  180 (305)
T ss_dssp             HHHHHHHTTCCCCCCCGGGEEECT---------------------------TCCEEECSCCSCCCCCGGGGGCCCCCCCT
T ss_pred             HHHHHHhCCEEecCCCccEEEEcC---------------------------CCCeeecchhhhhhhcccccCCCcccChh
Confidence            689999999999999999999954                           445677777766543222  223578999


Q ss_pred             cccchhhhcCCCCccchhHhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHHHHHHhhcCCCCCCcc
Q 025467           79 YRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEG  158 (252)
Q Consensus        79 y~aPE~l~~~~~~~~~Diws~G~~l~~l~~g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~  158 (252)
                      |+|||++.+..|+.++||||+||++|+|++|..||.+.+..+.+..+....|.++...+...            ...+..
T Consensus       181 Y~APE~~~~~~y~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~------------~~~~~~  248 (305)
T d1blxa_         181 YRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRD------------VALPRQ  248 (305)
T ss_dssp             TCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCGGGSCTT------------CSSCGG
T ss_pred             hcCcchhcCCCCChhehhhchHHHHHHHHHCCCCCCCCCHHHHHHHHHHhhCCCchhccccc------------ccchhh
Confidence            99999999999999999999999999999999999999999999999998887654221100            000000


Q ss_pred             ccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCCCCCHHH
Q 025467          159 AASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTARE  238 (252)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~ta~e  238 (252)
                           ...                                  ..............++.+.+||.+||++||++||||+|
T Consensus       249 -----~~~----------------------------------~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~sa~e  289 (305)
T d1blxa_         249 -----AFH----------------------------------SKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYS  289 (305)
T ss_dssp             -----GSC----------------------------------CCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTSCCHHH
T ss_pred             -----hhc----------------------------------cccccchhhccccCCHHHHHHHHHHCcCChhHCcCHHH
Confidence                 000                                  00000111223456778999999999999999999999


Q ss_pred             HHcCCCCCCccc
Q 025467          239 ALRHPFFTRDHL  250 (252)
Q Consensus       239 ~l~hpwf~~~~~  250 (252)
                      +|+||||++...
T Consensus       290 ~L~Hpff~~i~~  301 (305)
T d1blxa_         290 ALSHPYFQDLER  301 (305)
T ss_dssp             HHTSGGGTTCCC
T ss_pred             HhcChhhcCchh
Confidence            999999987643

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.6e-39  Score=258.97  Aligned_cols=143  Identities=31%  Similarity=0.545  Sum_probs=114.1

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCC-CccccCCCc
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ-NYIVSTRHY   79 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~-~~~~~t~~y   79 (252)
                      ||+|||++||+||||||+|||++.                           .+.+||+|||++....... ....||+.|
T Consensus       118 al~~lH~~~ivHrDiKp~Nill~~---------------------------~~~~kl~DFG~a~~~~~~~~~~~~Gt~~Y  170 (263)
T d2j4za1         118 ALSYCHSKRVIHRDIKPENLLLGS---------------------------AGELKIADFGWSVHAPSSRRTTLCGTLDY  170 (263)
T ss_dssp             HHHHHHHTTCCCCCCCGGGEEECT---------------------------TSCEEECCCCSCSCCCCCCCEETTEEGGG
T ss_pred             HHHHHHHCCeeeeeeccccceecC---------------------------CCCEeecccceeeecCCCcccccCCCCcc
Confidence            689999999999999999999944                           4456777777776543332 335799999


Q ss_pred             ccchhhhcCCCCccchhHhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHHHHHHhhcCCCCCCccc
Q 025467           80 RAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGA  159 (252)
Q Consensus        80 ~aPE~l~~~~~~~~~Diws~G~~l~~l~~g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~  159 (252)
                      +|||++.+..|+.++||||+||++|+|++|+.||.+.+..+.+..+...                       ....|   
T Consensus       171 ~APE~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~-----------------------~~~~p---  224 (263)
T d2j4za1         171 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV-----------------------EFTFP---  224 (263)
T ss_dssp             CCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTT-----------------------CCCCC---
T ss_pred             cCHHHHcCCCCCchhhhhhHhHHHHHHhcCCCCCCCCCHHHHHHHHHcC-----------------------CCCCC---
Confidence            9999999999999999999999999999999999876655444433221                       11111   


Q ss_pred             cchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCCCCCHHHH
Q 025467          160 ASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREA  239 (252)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~ta~e~  239 (252)
                                                                          ...++++.+||.+||+.||++|||++|+
T Consensus       225 ----------------------------------------------------~~~s~~~~~li~~~L~~dp~~R~t~~ei  252 (263)
T d2j4za1         225 ----------------------------------------------------DFVTEGARDLISRLLKHNPSQRPMLREV  252 (263)
T ss_dssp             ----------------------------------------------------TTSCHHHHHHHHHHTCSSGGGSCCHHHH
T ss_pred             ----------------------------------------------------ccCCHHHHHHHHHHccCCHhHCcCHHHH
Confidence                                                                1245689999999999999999999999


Q ss_pred             HcCCCCCCc
Q 025467          240 LRHPFFTRD  248 (252)
Q Consensus       240 l~hpwf~~~  248 (252)
                      |+||||+..
T Consensus       253 l~hp~~~~~  261 (263)
T d2j4za1         253 LEHPWITAN  261 (263)
T ss_dssp             HTCHHHHHH
T ss_pred             HcCcCcCCc
Confidence            999999754

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.5e-39  Score=264.31  Aligned_cols=173  Identities=29%  Similarity=0.518  Sum_probs=127.2

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCC---CccccCC
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ---NYIVSTR   77 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~---~~~~~t~   77 (252)
                      ||+|||++||+||||||+|||++.                           .+.+||+|||.++......   ...+||+
T Consensus       112 aL~~lH~~~iiHrDiKp~NIli~~---------------------------~~~~KL~DFG~a~~~~~~~~~~~~~~gt~  164 (299)
T d1ua2a_         112 GLEYLHQHWILHRDLKPNNLLLDE---------------------------NGVLKLADFGLAKSFGSPNRAYTHQVVTR  164 (299)
T ss_dssp             HHHHHHHTTCCCCCCCGGGEEECT---------------------------TCCEEECCCGGGSTTTSCCCCCCCSCCCC
T ss_pred             HHHHhhccceecccCCcceEEecC---------------------------CCccccccCccccccCCCcccccceecCh
Confidence            689999999999999999999944                           4456777777775443321   2347899


Q ss_pred             CcccchhhhcC-CCCccchhHhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHHHHHHhhcCCCCCC
Q 025467           78 HYRAPEVILGL-GWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWP  156 (252)
Q Consensus        78 ~y~aPE~l~~~-~~~~~~Diws~G~~l~~l~~g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~  156 (252)
                      .|+|||++... .|+.++||||+||++|+|++|.+||.+.++.+.+..+.+..|+++.+.+....            ...
T Consensus       165 ~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf~~~~~~~~l~~i~~~~~~~~~~~~~~~~------------~~~  232 (299)
T d1ua2a_         165 WYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPDMC------------SLP  232 (299)
T ss_dssp             TTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCTTTSSSTT------------SST
T ss_pred             hhccHHHHccCCCCChhhhhhhcchHHHHHHhCcCCCCCCCHHHHHHHHHHhcCCCChhhccchh------------ccc
Confidence            99999998765 57999999999999999999999999999999999999998877643211000            000


Q ss_pred             ccccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCCCCCH
Q 025467          157 EGAASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTA  236 (252)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~ta  236 (252)
                      ..          .               .+...     .        ...........++++.+||.+||++||++||||
T Consensus       233 ~~----------~---------------~~~~~-----~--------~~~~~~~~~~~s~~~~dll~~~L~~dP~~R~sa  274 (299)
T d1ua2a_         233 DY----------V---------------TFKSF-----P--------GIPLHHIFSAAGDDLLDLIQGLFLFNPCARITA  274 (299)
T ss_dssp             TC----------C---------------CCCCC-----C--------CCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCCH
T ss_pred             hh----------h---------------hhccC-----C--------CCChHHhcccCCHHHHHHHHHHccCChhhCcCH
Confidence            00          0               00000     0        000011123456789999999999999999999


Q ss_pred             HHHHcCCCCCCccc
Q 025467          237 REALRHPFFTRDHL  250 (252)
Q Consensus       237 ~e~l~hpwf~~~~~  250 (252)
                      +|+|+||||++.+.
T Consensus       275 ~e~L~Hp~f~~~p~  288 (299)
T d1ua2a_         275 TQALKMKYFSNRPG  288 (299)
T ss_dssp             HHHHTSGGGTSSSC
T ss_pred             HHHhCCHhhCCCCC
Confidence            99999999998753

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=6.1e-39  Score=259.24  Aligned_cols=146  Identities=27%  Similarity=0.444  Sum_probs=115.4

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCC---CCccccCC
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD---QNYIVSTR   77 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~---~~~~~~t~   77 (252)
                      ||+|||++||+||||||+|||++.                           ++.+||+|||+++.....   ....+||+
T Consensus       128 aL~yLH~~~iiHrDiKp~NILl~~---------------------------~~~vkl~DFG~a~~~~~~~~~~~~~~gt~  180 (293)
T d1yhwa1         128 ALEFLHSNQVIHRDIKSDNILLGM---------------------------DGSVKLTDFGFCAQITPEQSKRSTMVGTP  180 (293)
T ss_dssp             HHHHHHHTTEECCCCSGGGEEECT---------------------------TCCEEECCCTTCEECCSTTCCBCCCCSCG
T ss_pred             HHHHHHHCCCcccCCcHHHeEECC---------------------------CCcEeeccchhheeeccccccccccccCC
Confidence            689999999999999999999943                           446788888887654322   23357999


Q ss_pred             CcccchhhhcCCCCccchhHhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHHHHHHhhcCCCCCCc
Q 025467           78 HYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPE  157 (252)
Q Consensus        78 ~y~aPE~l~~~~~~~~~Diws~G~~l~~l~~g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~  157 (252)
                      .|+|||++.+..|+.++||||+||++|+|++|..||.+.+....+..+.....                      ...  
T Consensus       181 ~Y~aPE~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~~~~~~~----------------------~~~--  236 (293)
T d1yhwa1         181 YWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGT----------------------PEL--  236 (293)
T ss_dssp             GGCCHHHHSSSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHHCS----------------------CCC--
T ss_pred             CccChhhhcCCCCCchhceehHhHHHHHHhhCCCCCCCCCHHHHHHHHHhCCC----------------------CCC--
Confidence            99999999998999999999999999999999999987776555443322110                      000  


Q ss_pred             cccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCCCCCHH
Q 025467          158 GAASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAR  237 (252)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~ta~  237 (252)
                                                                         ..+...++++++||.+||+.||++||||+
T Consensus       237 ---------------------------------------------------~~~~~~s~~~~~li~~~L~~dP~~R~s~~  265 (293)
T d1yhwa1         237 ---------------------------------------------------QNPEKLSAIFRDFLNRCLDMDVEKRGSAK  265 (293)
T ss_dssp             ---------------------------------------------------SSGGGSCHHHHHHHHHHTCSSTTTSCCHH
T ss_pred             ---------------------------------------------------CCcccCCHHHHHHHHHHccCChhHCcCHH
Confidence                                                               00123457899999999999999999999


Q ss_pred             HHHcCCCCCCc
Q 025467          238 EALRHPFFTRD  248 (252)
Q Consensus       238 e~l~hpwf~~~  248 (252)
                      |+|+||||+..
T Consensus       266 eil~Hp~~~~~  276 (293)
T d1yhwa1         266 ELLQHQFLKIA  276 (293)
T ss_dssp             HHTTCGGGGGC
T ss_pred             HHhcCHhhCCC
Confidence            99999999754

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=6.2e-39  Score=256.53  Aligned_cols=146  Identities=24%  Similarity=0.387  Sum_probs=110.0

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCC-----CCcccc
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD-----QNYIVS   75 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~-----~~~~~~   75 (252)
                      ||+|||++||+||||||+|||++.                           .+.+||+|||+|+.....     ....+|
T Consensus       115 al~ylH~~~IiHrDiKp~NILl~~---------------------------~~~~KL~DFG~a~~~~~~~~~~~~~~~~G  167 (271)
T d1nvra_         115 GVVYLHGIGITHRDIKPENLLLDE---------------------------RDNLKISDFGLATVFRYNNRERLLNKMCG  167 (271)
T ss_dssp             HHHHHHHTTEECSCCCGGGEEECT---------------------------TCCEEECCCTTCEECEETTEECCBCCCCS
T ss_pred             HHHHHHHcCCccCcccHHHEEECC---------------------------CCCEEEccchhheeeccCCccccccceee
Confidence            689999999999999999999944                           445777888877643221     233579


Q ss_pred             CCCcccchhhhcCCC-CccchhHhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHHHHHHhhcCCCC
Q 025467           76 TRHYRAPEVILGLGW-TYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLD  154 (252)
Q Consensus        76 t~~y~aPE~l~~~~~-~~~~Diws~G~~l~~l~~g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~  154 (252)
                      |+.|+|||++.+..+ +.++||||+||++|+|++|+.||....+..............                      
T Consensus       168 T~~Y~APE~~~~~~~~~~~~DiwSlGvilyeml~G~~pf~~~~~~~~~~~~~~~~~~~----------------------  225 (271)
T d1nvra_         168 TLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTY----------------------  225 (271)
T ss_dssp             CGGGSCTHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSSTTSHHHHHHHTTCTT----------------------
T ss_pred             CcCccCHhHhcCCCCCCCceeeeHhHHHHHHHHhCCCCCCCCChHHHHHHHHhcCCCC----------------------
Confidence            999999999998876 578999999999999999999997654322211111100000                      


Q ss_pred             CCccccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCCCC
Q 025467          155 WPEGAASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRL  234 (252)
Q Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~  234 (252)
                                                                           ...+...++++.+||.+||+.||++||
T Consensus       226 -----------------------------------------------------~~~~~~~s~~~~~li~~~L~~dP~~R~  252 (271)
T d1nvra_         226 -----------------------------------------------------LNPWKKIDSAPLALLHKILVENPSARI  252 (271)
T ss_dssp             -----------------------------------------------------STTGGGSCHHHHHHHHHHSCSSTTTSC
T ss_pred             -----------------------------------------------------CCccccCCHHHHHHHHHHcCCChhHCc
Confidence                                                                 001133467899999999999999999


Q ss_pred             CHHHHHcCCCCCCc
Q 025467          235 TAREALRHPFFTRD  248 (252)
Q Consensus       235 ta~e~l~hpwf~~~  248 (252)
                      ||+|+|+||||++.
T Consensus       253 t~~eil~hpwf~~~  266 (271)
T d1nvra_         253 TIPDIKKDRWYNKP  266 (271)
T ss_dssp             CHHHHTTCTTTTCC
T ss_pred             CHHHHhcCHhhCcC
Confidence            99999999999854

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=9.1e-38  Score=258.75  Aligned_cols=174  Identities=33%  Similarity=0.576  Sum_probs=136.9

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCCCccccCCCcc
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYR   80 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~~~~~~t~~y~   80 (252)
                      ||+|||++||+||||||+|||+                           +..+.++++|||.+..........+||+.|+
T Consensus       133 aL~~LH~~~IiHrDiKp~NIL~---------------------------~~~~~~kl~Dfg~a~~~~~~~~~~~~t~~y~  185 (346)
T d1cm8a_         133 GLRYIHAAGIIHRDLKPGNLAV---------------------------NEDCELKILDFGLARQADSEMTGYVVTRWYR  185 (346)
T ss_dssp             HHHHHHHTTEECCCCCGGGEEE---------------------------CTTCCEEECCCTTCEECCSSCCSSCSCGGGC
T ss_pred             HHHHHHhCCCcccccCcchhhc---------------------------ccccccccccccceeccCCcccccccccccc
Confidence            6899999999999999999999                           4455678888888877666666678999999


Q ss_pred             cchhhhcC-CCCccchhHhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHHHHHHhhcCCCCCCccc
Q 025467           81 APEVILGL-GWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGA  159 (252)
Q Consensus        81 aPE~l~~~-~~~~~~Diws~G~~l~~l~~g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~  159 (252)
                      |||++.+. .++.++||||+||++|+|++|..||.+.+....+..+....+.+|.++..............+......  
T Consensus       186 aPE~~~~~~~~~~~~DiwSlGvil~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--  263 (346)
T d1cm8a_         186 APEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQRLQSDEAKNYMKGLPELEK--  263 (346)
T ss_dssp             CTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHTCSCHHHHHHHHHSCCCCC--
T ss_pred             CHHHHcCCCCCCccchhhcchHHHHHHHHCcCCCCCCChHHHHHHHHhccCCCcHHHHhhhcchhhhhhhccCCcccc--
Confidence            99999875 468999999999999999999999999999999999999999999887665543222222111111000  


Q ss_pred             cchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCCCCCHHHH
Q 025467          160 ASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREA  239 (252)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~ta~e~  239 (252)
                                                                   ..........++++.+||.+||++||.+||||+|+
T Consensus       264 ---------------------------------------------~~~~~~~~~~s~~~~dli~~mL~~dP~~R~ta~ei  298 (346)
T d1cm8a_         264 ---------------------------------------------KDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEA  298 (346)
T ss_dssp             ---------------------------------------------CCGGGTCTTCCHHHHHHHHHHSCSSTTTSCCHHHH
T ss_pred             ---------------------------------------------cchHHhccCCCHHHHHHHHHHCcCChhHCcCHHHH
Confidence                                                         00011123456789999999999999999999999


Q ss_pred             HcCCCCCCc
Q 025467          240 LRHPFFTRD  248 (252)
Q Consensus       240 l~hpwf~~~  248 (252)
                      |+||||+..
T Consensus       299 L~Hp~f~~~  307 (346)
T d1cm8a_         299 LAHPYFESL  307 (346)
T ss_dssp             HHSGGGTTT
T ss_pred             hcChhhCcC
Confidence            999999864

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=7.4e-39  Score=262.62  Aligned_cols=186  Identities=23%  Similarity=0.333  Sum_probs=112.8

Q ss_pred             Chhhhhc-cCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCC-CCCccccCCC
Q 025467            1 MFAVMHD-LCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERP-DQNYIVSTRH   78 (252)
Q Consensus         1 aL~~lH~-~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~-~~~~~~~t~~   78 (252)
                      ||+|||+ +||+||||||+|||++                           ..+.+||+|||+|..... .....+||+.
T Consensus       116 aL~yLH~~~~IiHRDiKP~NILl~---------------------------~~~~vkl~DFGla~~~~~~~~~~~~GT~~  168 (322)
T d1s9ja_         116 GLTYLREKHKIMHRDVKPSNILVN---------------------------SRGEIKLCDFGVSGQLIDSMANSFVGTRS  168 (322)
T ss_dssp             HHHHHHHHHCCCCSCCSGGGEEEC---------------------------TTCCEEECCCCCCHHHHHHTC---CCSSC
T ss_pred             HHHHHHHhCCEEccccCHHHeeEC---------------------------CCCCEEEeeCCCccccCCCccccccCCcc
Confidence            6899997 5999999999999994                           445688888888864322 2234589999


Q ss_pred             cccchhhhcCCCCccchhHhHHHHHHHHHhCCCCCCCCChHHH-HHHHHHHhCCCchHHHHHhhHHHHHHhhcCCCCCCc
Q 025467           79 YRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEH-LAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPE  157 (252)
Q Consensus        79 y~aPE~l~~~~~~~~~Diws~G~~l~~l~~g~~pf~~~~~~~~-~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~  157 (252)
                      |+|||++.+..|+.++||||+||++|+|++|+.||.+.+.... ........|........ ................+ 
T Consensus       169 Y~APEvl~~~~y~~~~DiWSlGvil~ell~G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~-  246 (322)
T d1s9ja_         169 YMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPR-PRTPGRPLSSYGMDSRP-  246 (322)
T ss_dssp             CCCHHHHHCSCCCTTHHHHHHHHHHHHHHHSSCCSSCCCTTHHHHHC-------------------------------C-
T ss_pred             ccCchHHcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhcCCcccCCcc-ccccccccccccccccc-
Confidence            9999999999999999999999999999999999987654332 22223333322211000 00000000000000000 


Q ss_pred             cccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCCCCCHH
Q 025467          158 GAASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAR  237 (252)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~ta~  237 (252)
                      .....+........+.                                 ........+.++.+||.+||++||.+||||+
T Consensus       247 ~~~~~~~~~~~~~~~~---------------------------------~~~~~~~~s~~~~dli~~~L~~dP~~R~ta~  293 (322)
T d1s9ja_         247 PMAIFELLDYIVNEPP---------------------------------PKLPSGVFSLEFQDFVNKCLIKNPAERADLK  293 (322)
T ss_dssp             CCCHHHHHHHHHTSCC---------------------------------CCCCBTTBCHHHHHHHHHHTCSSTTTSCCHH
T ss_pred             chhHHHHHhhhhccCC---------------------------------ccCccccCCHHHHHHHHHHcCCChhHCcCHH
Confidence            0000000110000000                                 0011133567899999999999999999999


Q ss_pred             HHHcCCCCCCc
Q 025467          238 EALRHPFFTRD  248 (252)
Q Consensus       238 e~l~hpwf~~~  248 (252)
                      |+|+||||++.
T Consensus       294 e~L~Hpf~~~~  304 (322)
T d1s9ja_         294 QLMVHAFIKRS  304 (322)
T ss_dssp             HHHTSHHHHHH
T ss_pred             HHhhCHhhCcC
Confidence            99999999753

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=5.8e-38  Score=256.28  Aligned_cols=143  Identities=29%  Similarity=0.479  Sum_probs=118.4

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCCCccccCCCcc
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYR   80 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~~~~~~t~~y~   80 (252)
                      ||+|||++||+||||||+|||++                           .++.+||+|||+|+.........+||+.|+
T Consensus       116 al~~lH~~~iiHrDiKp~NILl~---------------------------~~g~vkL~DFG~a~~~~~~~~~~~Gt~~Y~  168 (316)
T d1fota_         116 ALEYLHSKDIIYRDLKPENILLD---------------------------KNGHIKITDFGFAKYVPDVTYTLCGTPDYI  168 (316)
T ss_dssp             HHHHHHTTTEECCCCCGGGEEEC---------------------------TTSCEEECCCSSCEECSSCBCCCCSCTTTC
T ss_pred             hhhhhccCcEEccccCchheeEc---------------------------CCCCEEEecCccceEeccccccccCccccc
Confidence            68999999999999999999994                           455688888888877666556678999999


Q ss_pred             cchhhhcCCCCccchhHhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHHHHHHhhcCCCCCCcccc
Q 025467           81 APEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAA  160 (252)
Q Consensus        81 aPE~l~~~~~~~~~Diws~G~~l~~l~~g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (252)
                      |||++.+..|+.++||||+||++|+|++|..||.+.+..+...++....                       ...|    
T Consensus       169 APE~l~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~i~~~~-----------------------~~~p----  221 (316)
T d1fota_         169 APEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMKTYEKILNAE-----------------------LRFP----  221 (316)
T ss_dssp             CHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHCC-----------------------CCCC----
T ss_pred             CHHHHcCCCCCchhhccccchhHHHHHhCCCCCCCcCHHHHHHHHHcCC-----------------------CCCC----
Confidence            9999999899999999999999999999999998877655554433211                       1111    


Q ss_pred             chhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCCCC-----C
Q 025467          161 SRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRL-----T  235 (252)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~-----t  235 (252)
                                                                         ...++++.+++.+||+.||.+|+     |
T Consensus       222 ---------------------------------------------------~~~s~~~~~li~~~L~~dp~~R~~~~r~t  250 (316)
T d1fota_         222 ---------------------------------------------------PFFNEDVKDLLSRLITRDLSQRLGNLQNG  250 (316)
T ss_dssp             ---------------------------------------------------TTSCHHHHHHHHHHTCSCTTTCTTSSTTT
T ss_pred             ---------------------------------------------------CCCCHHHHHHHHHHhhhCHHhccccchhh
Confidence                                                               12356899999999999999996     9


Q ss_pred             HHHHHcCCCCCCc
Q 025467          236 AREALRHPFFTRD  248 (252)
Q Consensus       236 a~e~l~hpwf~~~  248 (252)
                      ++++++||||++.
T Consensus       251 ~~~il~Hp~f~~i  263 (316)
T d1fota_         251 TEDVKNHPWFKEV  263 (316)
T ss_dssp             THHHHTSGGGSSC
T ss_pred             HHHHHcCcccccC
Confidence            9999999999874

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=4e-38  Score=260.61  Aligned_cols=143  Identities=29%  Similarity=0.473  Sum_probs=118.3

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCCCccccCCCcc
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYR   80 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~~~~~~t~~y~   80 (252)
                      ||.|||++|||||||||+|||++                           .++.+||+|||+|+..........||+.|+
T Consensus       153 aL~yLH~~~iiHRDIKP~NILl~---------------------------~~g~ikL~DFG~a~~~~~~~~~~~Gt~~Y~  205 (350)
T d1rdqe_         153 TFEYLHSLDLIYRDLKPENLLID---------------------------QQGYIQVTDFGFAKRVKGRTWTLCGTPEAL  205 (350)
T ss_dssp             HHHHHHHTTEECCCCSGGGEEEC---------------------------TTSCEEECCCTTCEECSSCBCCCEECGGGC
T ss_pred             HHHHHHhCCEecCcCCHHHcccC---------------------------CCCCEEeeeceeeeecccccccccCccccC
Confidence            68999999999999999999994                           455688888988877665555668999999


Q ss_pred             cchhhhcCCCCccchhHhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHHHHHHhhcCCCCCCcccc
Q 025467           81 APEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAA  160 (252)
Q Consensus        81 aPE~l~~~~~~~~~Diws~G~~l~~l~~g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (252)
                      |||++.+..|+.++||||+||++|+|++|..||.+.+....+..+......                       .     
T Consensus       206 APE~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~i~~~~~~-----------------------~-----  257 (350)
T d1rdqe_         206 APEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR-----------------------F-----  257 (350)
T ss_dssp             CHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCC-----------------------C-----
T ss_pred             CHHHHcCCCCCccccccchhHHHHHHHhCCCCCCCcCHHHHHHHHhcCCCC-----------------------C-----
Confidence            999999999999999999999999999999999887665554444321111                       1     


Q ss_pred             chhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCCCC-----C
Q 025467          161 SRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRL-----T  235 (252)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~-----t  235 (252)
                                                                        ....++++.+||++||+.||.+|+     |
T Consensus       258 --------------------------------------------------p~~~s~~~~~li~~~L~~dP~kR~~~~r~t  287 (350)
T d1rdqe_         258 --------------------------------------------------PSHFSSDLKDLLRNLLQVDLTKRFGNLKNG  287 (350)
T ss_dssp             --------------------------------------------------CTTCCHHHHHHHHHHSCSCTTTCTTSSTTT
T ss_pred             --------------------------------------------------CccCCHHHHHHHHHHhhhCHHhcccccccc
Confidence                                                              122456899999999999999995     9


Q ss_pred             HHHHHcCCCCCCc
Q 025467          236 AREALRHPFFTRD  248 (252)
Q Consensus       236 a~e~l~hpwf~~~  248 (252)
                      ++++++||||++.
T Consensus       288 ~~ell~Hp~f~~~  300 (350)
T d1rdqe_         288 VNDIKNHKWFATT  300 (350)
T ss_dssp             THHHHTSGGGTTC
T ss_pred             HHHHHcCccccCC
Confidence            9999999999875

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=6.1e-38  Score=255.19  Aligned_cols=151  Identities=29%  Similarity=0.476  Sum_probs=108.7

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCC--CccccCCC
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ--NYIVSTRH   78 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~--~~~~~t~~   78 (252)
                      ||+|||++||+||||||+|||+...                        +..+.+||+|||+++......  ...+||+.
T Consensus       119 al~ylH~~~iiHrDiKp~Nil~~~~------------------------~~~~~vkl~DFG~a~~~~~~~~~~~~~GT~~  174 (307)
T d1a06a_         119 AVKYLHDLGIVHRDLKPENLLYYSL------------------------DEDSKIMISDFGLSKMEDPGSVLSTACGTPG  174 (307)
T ss_dssp             HHHHHHHTTCCCSCCCGGGEEESSS------------------------STTCCEEECCC------------------CT
T ss_pred             HHHhhhhceeeeEEecccceeeccc------------------------CCCceEEEeccceeEEccCCCeeeeeeeCcc
Confidence            6899999999999999999999542                        234568889999887543332  33579999


Q ss_pred             cccchhhhcCCCCccchhHhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHHHHHHhhcCCCCCCcc
Q 025467           79 YRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEG  158 (252)
Q Consensus        79 y~aPE~l~~~~~~~~~Diws~G~~l~~l~~g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~  158 (252)
                      |+|||++.+..|+.++||||+||++|+|++|..||.+.........+......+                       +. 
T Consensus       175 y~APE~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~~~~~~~~i~~~~~~~-----------------------~~-  230 (307)
T d1a06a_         175 YVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEF-----------------------DS-  230 (307)
T ss_dssp             TSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHTTCCCC-----------------------CT-
T ss_pred             ccCcHHHcCCCCCcHHHhhhhhHHHHHHHhCCCCCCCCCHHHHHHHHhccCCCC-----------------------CC-
Confidence            999999999999999999999999999999999998776655444332211110                       00 


Q ss_pred             ccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCCCCCHHH
Q 025467          159 AASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTARE  238 (252)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~ta~e  238 (252)
                                                                        ......++++.+||.+||+.||++||||+|
T Consensus       231 --------------------------------------------------~~~~~~s~~~~~li~~~L~~dP~~R~s~~e  260 (307)
T d1a06a_         231 --------------------------------------------------PYWDDISDSAKDFIRHLMEKDPEKRFTCEQ  260 (307)
T ss_dssp             --------------------------------------------------TTTTTSCHHHHHHHHHHSCSSGGGSCCHHH
T ss_pred             --------------------------------------------------ccccCCCHHHHHHHHHHccCCHhHCcCHHH
Confidence                                                              011335678999999999999999999999


Q ss_pred             HHcCCCCCCcc
Q 025467          239 ALRHPFFTRDH  249 (252)
Q Consensus       239 ~l~hpwf~~~~  249 (252)
                      +|+||||++..
T Consensus       261 il~hp~~~~~~  271 (307)
T d1a06a_         261 ALQHPWIAGDT  271 (307)
T ss_dssp             HHHSTTTTSSC
T ss_pred             HhcCHhhCCCC
Confidence            99999998653

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

Probab=100.00  E-value=7e-38  Score=259.03  Aligned_cols=150  Identities=31%  Similarity=0.484  Sum_probs=120.3

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCCC--ccccCCC
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQN--YIVSTRH   78 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~~--~~~~t~~   78 (252)
                      ||+|||++|||||||||+|||++.+                         ..+.+||+|||+++.......  ...||+.
T Consensus       136 aL~ylH~~~iiHrDiKp~NIll~~~-------------------------~~~~vkL~DFG~a~~~~~~~~~~~~~gT~~  190 (350)
T d1koaa2         136 GLCHMHENNYVHLDLKPENIMFTTK-------------------------RSNELKLIDFGLTAHLDPKQSVKVTTGTAE  190 (350)
T ss_dssp             HHHHHHHTTEECCCCCGGGEEESST-------------------------TSCCEEECCCTTCEECCTTSCEEEECSCTT
T ss_pred             HHHHHHhcCCeeeeechhHeeeccC-------------------------CCCeEEEeecchheecccccccceecCccc
Confidence            6899999999999999999999542                         245688999998876544332  3578999


Q ss_pred             cccchhhhcCCCCccchhHhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHHHHHHhhcCCCCCCcc
Q 025467           79 YRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEG  158 (252)
Q Consensus        79 y~aPE~l~~~~~~~~~Diws~G~~l~~l~~g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~  158 (252)
                      |+|||++.+..|+.++||||+||++|+|++|..||.+.+..+.+..+......++.                        
T Consensus       191 Y~aPEv~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~~~~------------------------  246 (350)
T d1koaa2         191 FAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDWNMDD------------------------  246 (350)
T ss_dssp             TCCHHHHHTCCBCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCSCC------------------------
T ss_pred             ccCHHHHcCCCCChhHhhhhhhHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCc------------------------
Confidence            99999999999999999999999999999999999987776666555432222110                        


Q ss_pred             ccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCCCCCHHH
Q 025467          159 AASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTARE  238 (252)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~ta~e  238 (252)
                                                                        ......++++++||.+||+.||++||||+|
T Consensus       247 --------------------------------------------------~~~~~~s~~~~~li~~~L~~dP~~R~t~~e  276 (350)
T d1koaa2         247 --------------------------------------------------SAFSGISEDGKDFIRKLLLADPNTRMTIHQ  276 (350)
T ss_dssp             --------------------------------------------------GGGGGCCHHHHHHHHHHCCSSGGGSCCHHH
T ss_pred             --------------------------------------------------ccccCCCHHHHHHHHHHccCChhHCcCHHH
Confidence                                                              001234568999999999999999999999


Q ss_pred             HHcCCCCCCcc
Q 025467          239 ALRHPFFTRDH  249 (252)
Q Consensus       239 ~l~hpwf~~~~  249 (252)
                      +|+||||+...
T Consensus       277 il~hp~~~~~~  287 (350)
T d1koaa2         277 ALEHPWLTPGN  287 (350)
T ss_dssp             HHHSTTTSCTT
T ss_pred             HhcCcccCCCC
Confidence            99999998653

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.2e-37  Score=249.06  Aligned_cols=144  Identities=22%  Similarity=0.439  Sum_probs=110.1

Q ss_pred             ChhhhhccC--ccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCC-CccccCC
Q 025467            1 MFAVMHDLC--MIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ-NYIVSTR   77 (252)
Q Consensus         1 aL~~lH~~~--ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~-~~~~~t~   77 (252)
                      ||+|||++|  |+||||||+|||++.                          ..+.+||+|||+++...... ...+||+
T Consensus       124 gl~yLH~~~~~IiHrDiKp~NILl~~--------------------------~~~~~Kl~DFGla~~~~~~~~~~~~GT~  177 (270)
T d1t4ha_         124 GLQFLHTRTPPIIHRDLKCDNIFITG--------------------------PTGSVKIGDLGLATLKRASFAKAVIGTP  177 (270)
T ss_dssp             HHHHHHTSSSCCCCSCCCGGGEEESS--------------------------TTSCEEECCTTGGGGCCTTSBEESCSSC
T ss_pred             HHHHHHHCCCCEEeCCcChhhceeeC--------------------------CCCCEEEeecCcceeccCCccCCcccCc
Confidence            689999999  999999999999942                          23457888888886543332 2357999


Q ss_pred             CcccchhhhcCCCCccchhHhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHHHHHHhhcCCCCCCc
Q 025467           78 HYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPE  157 (252)
Q Consensus        78 ~y~aPE~l~~~~~~~~~Diws~G~~l~~l~~g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~  157 (252)
                      .|+|||++.+ .|+.++||||+||++|+|++|..||.+..+...+.+.... +..|.                       
T Consensus       178 ~Y~aPE~~~~-~~~~~~DIwSlGvilyel~~g~~Pf~~~~~~~~~~~~i~~-~~~~~-----------------------  232 (270)
T d1t4ha_         178 EFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRVTS-GVKPA-----------------------  232 (270)
T ss_dssp             CCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHHHHHHHTT-TCCCG-----------------------
T ss_pred             cccCHHHhCC-CCCCcCchhhHHHHHHHHHHCCCCCCCcccHHHHHHHHHc-CCCCc-----------------------
Confidence            9999998865 6999999999999999999999999765544333221110 11110                       


Q ss_pred             cccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCCCCCHH
Q 025467          158 GAASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAR  237 (252)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~ta~  237 (252)
                                                                         ......++++.+||.+||+.||++||||+
T Consensus       233 ---------------------------------------------------~~~~~~~~~~~~li~~~l~~dp~~R~s~~  261 (270)
T d1t4ha_         233 ---------------------------------------------------SFDKVAIPEVKEIIEGCIRQNKDERYSIK  261 (270)
T ss_dssp             ---------------------------------------------------GGGGCCCHHHHHHHHHHSCSSGGGSCCHH
T ss_pred             ---------------------------------------------------ccCccCCHHHHHHHHHHccCCHhHCcCHH
Confidence                                                               01123456899999999999999999999


Q ss_pred             HHHcCCCCC
Q 025467          238 EALRHPFFT  246 (252)
Q Consensus       238 e~l~hpwf~  246 (252)
                      |+|+||||+
T Consensus       262 ell~Hp~fk  270 (270)
T d1t4ha_         262 DLLNHAFFQ  270 (270)
T ss_dssp             HHHTSGGGC
T ss_pred             HHhCCcccC
Confidence            999999996

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

Probab=100.00  E-value=1.4e-37  Score=257.46  Aligned_cols=150  Identities=29%  Similarity=0.534  Sum_probs=121.4

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCCC--ccccCCC
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQN--YIVSTRH   78 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~~--~~~~t~~   78 (252)
                      ||+|||++||+||||||+|||++.                         ...+.+||+|||+|........  ...||+.
T Consensus       139 aL~ylH~~~iiHRDiKp~NILl~~-------------------------~~~~~vkL~DFGla~~~~~~~~~~~~~gt~~  193 (352)
T d1koba_         139 GLKHMHEHSIVHLDIKPENIMCET-------------------------KKASSVKIIDFGLATKLNPDEIVKVTTATAE  193 (352)
T ss_dssp             HHHHHHHTTEECCCCCGGGEEESS-------------------------TTCCCEEECCCTTCEECCTTSCEEEECSSGG
T ss_pred             HHHHHHHCCeeecccccccccccc-------------------------cCCCeEEEeecccceecCCCCceeeccCccc
Confidence            689999999999999999999953                         1345689999999876554432  2578999


Q ss_pred             cccchhhhcCCCCccchhHhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHHHHHHhhcCCCCCCcc
Q 025467           79 YRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEG  158 (252)
Q Consensus        79 y~aPE~l~~~~~~~~~Diws~G~~l~~l~~g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~  158 (252)
                      |+|||++.+..|+.++||||+||++|+|++|..||.+.+....+..+......+|.                        
T Consensus       194 y~aPE~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~i~~~~~~~~~------------------------  249 (352)
T d1koba_         194 FAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLETLQNVKRCDWEFDE------------------------  249 (352)
T ss_dssp             GCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHHCCCCCCS------------------------
T ss_pred             ccCHHHHcCCCCCCccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCc------------------------
Confidence            99999999999999999999999999999999999988776666555443222211                        


Q ss_pred             ccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCCCCCHHH
Q 025467          159 AASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTARE  238 (252)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~ta~e  238 (252)
                                                                        ..+...++++.+||.+||+.||.+|||++|
T Consensus       250 --------------------------------------------------~~~~~~s~~~~~li~~~L~~dp~~R~s~~e  279 (352)
T d1koba_         250 --------------------------------------------------DAFSSVSPEAKDFIKNLLQKEPRKRLTVHD  279 (352)
T ss_dssp             --------------------------------------------------STTTTSCHHHHHHHHTTSCSSGGGSCCHHH
T ss_pred             --------------------------------------------------ccccCCCHHHHHHHHHHccCChhHCcCHHH
Confidence                                                              011235678999999999999999999999


Q ss_pred             HHcCCCCCCcc
Q 025467          239 ALRHPFFTRDH  249 (252)
Q Consensus       239 ~l~hpwf~~~~  249 (252)
                      +|+||||+...
T Consensus       280 il~Hp~~~~~~  290 (352)
T d1koba_         280 ALEHPWLKGDH  290 (352)
T ss_dssp             HHTSTTTSSCC
T ss_pred             HhcCHhhCCCc
Confidence            99999998653

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.4e-38  Score=254.45  Aligned_cols=147  Identities=27%  Similarity=0.478  Sum_probs=112.7

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCC---CCccccCC
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD---QNYIVSTR   77 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~---~~~~~~t~   77 (252)
                      ||+|||++||+||||||+|||++.                           ++.+||+|||+|......   ....+||+
T Consensus       122 gL~ylH~~~ivHrDiKp~NIll~~---------------------------~~~~Kl~DFG~a~~~~~~~~~~~~~~Gt~  174 (288)
T d2jfla1         122 ALNYLHDNKIIHRDLKAGNILFTL---------------------------DGDIKLADFGVSAKNTRTIQRRDSFIGTP  174 (288)
T ss_dssp             HHHHHHHTTEECCCCSGGGEEECT---------------------------TSCEEECCCTTCEECHHHHHHHTCCCSCC
T ss_pred             HHHHHHHCCEEEeecChhheeECC---------------------------CCCEEEEechhhhccCCCccccccccccc
Confidence            689999999999999999999944                           445788888887543221   12347999


Q ss_pred             Ccccchhhh-----cCCCCccchhHhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHHHHHHhhcCC
Q 025467           78 HYRAPEVIL-----GLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGR  152 (252)
Q Consensus        78 ~y~aPE~l~-----~~~~~~~~Diws~G~~l~~l~~g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~  152 (252)
                      .|+|||++.     ...|+.++||||+||++|+|++|..||.+.+..+.+..+....  .|                  .
T Consensus       175 ~y~APE~l~~~~~~~~~y~~k~DiwSlGvilyemltg~~Pf~~~~~~~~~~~i~~~~--~~------------------~  234 (288)
T d2jfla1         175 YWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMRVLLKIAKSE--PP------------------T  234 (288)
T ss_dssp             TTCCHHHHTTCSTTTSSTTTHHHHHHHHHHHHHHHHSSCTTTTSCGGGHHHHHHHSC--CC------------------C
T ss_pred             ccCCHHHHhhcccCCCCCChhhhHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCC--CC------------------C
Confidence            999999985     3457899999999999999999999998776655544332211  00                  0


Q ss_pred             CCCCccccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCC
Q 025467          153 LDWPEGAASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTD  232 (252)
Q Consensus       153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~  232 (252)
                      +                                                       ......++++.+||.+||+.||++
T Consensus       235 ~-------------------------------------------------------~~~~~~s~~~~~li~~~L~~dp~~  259 (288)
T d2jfla1         235 L-------------------------------------------------------AQPSRWSSNFKDFLKKCLEKNVDA  259 (288)
T ss_dssp             C-------------------------------------------------------SSGGGSCHHHHHHHHHHSCSSTTT
T ss_pred             C-------------------------------------------------------CccccCCHHHHHHHHHHccCChhH
Confidence            0                                                       001234568999999999999999


Q ss_pred             CCCHHHHHcCCCCCCcc
Q 025467          233 RLTAREALRHPFFTRDH  249 (252)
Q Consensus       233 R~ta~e~l~hpwf~~~~  249 (252)
                      |||++|+|+||||+...
T Consensus       260 R~t~~ell~hp~~~~~~  276 (288)
T d2jfla1         260 RWTTSQLLQHPFVTVDS  276 (288)
T ss_dssp             SCCHHHHTTSGGGCCCC
T ss_pred             CcCHHHHhcCcccCCCC
Confidence            99999999999998653

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=6.8e-38  Score=252.58  Aligned_cols=144  Identities=31%  Similarity=0.556  Sum_probs=113.0

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCC-----CCcccc
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD-----QNYIVS   75 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~-----~~~~~~   75 (252)
                      ||+|||++||+||||||+|||++.                           ++.++|+|||+|+.....     ....+|
T Consensus       120 al~ylH~~~iiHrDiKp~NIll~~---------------------------~~~vkl~DFG~a~~~~~~~~~~~~~~~~G  172 (288)
T d1uu3a_         120 ALEYLHGKGIIHRDLKPENILLNE---------------------------DMHIQITDFGTAKVLSPESKQARANSFVG  172 (288)
T ss_dssp             HHHHHHHTTEECSCCSGGGEEECT---------------------------TSCEEECCCTTCEECC----------CCC
T ss_pred             HHHhhccccEEcCcCCccccccCC---------------------------CceEEecccccceecccCCcccccccccC
Confidence            689999999999999999999944                           445777888877654321     123479


Q ss_pred             CCCcccchhhhcCCCCccchhHhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHHHHHHhhcCCCCC
Q 025467           76 TRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDW  155 (252)
Q Consensus        76 t~~y~aPE~l~~~~~~~~~Diws~G~~l~~l~~g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~  155 (252)
                      |+.|+|||++.+..|+.++||||+||++|+|++|..||.+.+......++...                       .+.+
T Consensus       173 T~~Y~APE~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~~~~~~~~i~~~-----------------------~~~~  229 (288)
T d1uu3a_         173 TAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKL-----------------------EYDF  229 (288)
T ss_dssp             CGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHTT-----------------------CCCC
T ss_pred             CccccCceeeccCCCCcccceehhhHHHHHHhhCCCCCCCcCHHHHHHHHHcC-----------------------CCCC
Confidence            99999999999999999999999999999999999999887665554433221                       1111


Q ss_pred             CccccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCCCCC
Q 025467          156 PEGAASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLT  235 (252)
Q Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~t  235 (252)
                      |                                                       ...++++.+||.+||+.||++|||
T Consensus       230 p-------------------------------------------------------~~~s~~~~~li~~~L~~dP~~R~t  254 (288)
T d1uu3a_         230 P-------------------------------------------------------EKFFPKARDLVEKLLVLDATKRLG  254 (288)
T ss_dssp             C-------------------------------------------------------TTCCHHHHHHHHTTSCSSGGGSTT
T ss_pred             C-------------------------------------------------------ccCCHHHHHHHHHHccCCHhHCcC
Confidence            1                                                       123568999999999999999999


Q ss_pred             HHH------HHcCCCCCCcc
Q 025467          236 ARE------ALRHPFFTRDH  249 (252)
Q Consensus       236 a~e------~l~hpwf~~~~  249 (252)
                      |+|      +++||||++..
T Consensus       255 ~~e~~~~~~i~~Hpff~~i~  274 (288)
T d1uu3a_         255 CEEMEGYGPLKAHPFFESVT  274 (288)
T ss_dssp             SGGGTCHHHHHTSGGGTTCC
T ss_pred             HHHHcCCHHHHcCCccCCCC
Confidence            988      58899998764

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.5e-37  Score=250.41  Aligned_cols=152  Identities=28%  Similarity=0.432  Sum_probs=120.1

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCC--CccccCCC
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ--NYIVSTRH   78 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~--~~~~~t~~   78 (252)
                      ||+|||++||+||||||+|||++.++                       .....+|++|||++.......  ....||+.
T Consensus       125 al~yLH~~~ivHrDiKp~Nill~~~~-----------------------~~~~~vkl~DfG~a~~~~~~~~~~~~~~t~~  181 (293)
T d1jksa_         125 GVYYLHSLQIAHFDLKPENIMLLDRN-----------------------VPKPRIKIIDFGLAHKIDFGNEFKNIFGTPE  181 (293)
T ss_dssp             HHHHHHHTTEECCCCSGGGEEESCSS-----------------------SSSCCEEECCCTTCEECTTSCBCSCCCCCGG
T ss_pred             HHHhhhhcceeecccccceEEEecCC-----------------------CcccceEecchhhhhhcCCCccccccCCCCc
Confidence            68999999999999999999996554                       233468999999987654332  33578999


Q ss_pred             cccchhhhcCCCCccchhHhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHHHHHHhhcCCCCCCcc
Q 025467           79 YRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEG  158 (252)
Q Consensus        79 y~aPE~l~~~~~~~~~Diws~G~~l~~l~~g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~  158 (252)
                      |+|||++.+..++.++||||+||++|+|++|..||.+.+..+.+..+.......+..                       
T Consensus       182 y~APE~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~~~~~~~~i~~~~~~~~~~-----------------------  238 (293)
T d1jksa_         182 FVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDE-----------------------  238 (293)
T ss_dssp             GCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHTTCCCCCHH-----------------------
T ss_pred             ccCHHHHcCCCCCCcccchhhhHHHHHHHcCCCCCCCCCHHHHHHHHHhcCCCCCch-----------------------
Confidence            999999999889999999999999999999999999877666555443322221111                       


Q ss_pred             ccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCCCCCHHH
Q 025467          159 AASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTARE  238 (252)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~ta~e  238 (252)
                                                                         .....+.++.+||++||+.||++|||++|
T Consensus       239 ---------------------------------------------------~~~~~s~~~~~li~~~L~~dP~~R~s~~e  267 (293)
T d1jksa_         239 ---------------------------------------------------YFSNTSALAKDFIRRLLVKDPKKRMTIQD  267 (293)
T ss_dssp             ---------------------------------------------------HHTTSCHHHHHHHHTTSCSSGGGSCCHHH
T ss_pred             ---------------------------------------------------hcCCCCHHHHHHHHHHccCChhHCcCHHH
Confidence                                                               11234568999999999999999999999


Q ss_pred             HHcCCCCCCcc
Q 025467          239 ALRHPFFTRDH  249 (252)
Q Consensus       239 ~l~hpwf~~~~  249 (252)
                      +|+||||+...
T Consensus       268 il~hp~~~~~~  278 (293)
T d1jksa_         268 SLQHPWIKPKD  278 (293)
T ss_dssp             HHHSTTTCC--
T ss_pred             HhcCcccCCCC
Confidence            99999998643

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.8e-37  Score=253.22  Aligned_cols=143  Identities=28%  Similarity=0.489  Sum_probs=114.6

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCC---CCccccCC
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD---QNYIVSTR   77 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~---~~~~~~t~   77 (252)
                      ||+|||++||+||||||+|||++                           .++.+||+|||+|+.....   ....+||+
T Consensus       117 al~ylH~~~iiHRDlKP~NILl~---------------------------~~g~vkl~DFG~a~~~~~~~~~~~~~~GT~  169 (337)
T d1o6la_         117 ALEYLHSRDVVYRDIKLENLMLD---------------------------KDGHIKITDFGLCKEGISDGATMKTFCGTP  169 (337)
T ss_dssp             HHHHHHHTTCBCCCCCGGGEEEC---------------------------TTSCEEECCCTTCBCSCCTTCCBCCCEECG
T ss_pred             hhhhhhhcCccccccCHHHeEec---------------------------CCCCEEEeecccccccccCCcccccceeCH
Confidence            68999999999999999999994                           4456788888887653322   22358999


Q ss_pred             CcccchhhhcCCCCccchhHhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHHHHHHhhcCCCCCCc
Q 025467           78 HYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPE  157 (252)
Q Consensus        78 ~y~aPE~l~~~~~~~~~Diws~G~~l~~l~~g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~  157 (252)
                      .|+|||++.+..|+.++||||+||++|+|++|..||.+.+.......+..                       +.+.+| 
T Consensus       170 ~Y~aPE~~~~~~y~~~~DiwSlGvilyeml~G~~pf~~~~~~~~~~~i~~-----------------------~~~~~p-  225 (337)
T d1o6la_         170 EYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILM-----------------------EEIRFP-  225 (337)
T ss_dssp             GGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHH-----------------------CCCCCC-
T ss_pred             HHhhhhhccCCCCChhhcccchhhHHHHHHHCCCCCCCcCHHHHHHHHhc-----------------------CCCCCC-
Confidence            99999999999999999999999999999999999998776554443322                       111111 


Q ss_pred             cccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCCCC---
Q 025467          158 GAASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRL---  234 (252)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~---  234 (252)
                                                                            ...++++++||.+||+.||.+|+   
T Consensus       226 ------------------------------------------------------~~~s~~~~dli~~~L~~dP~~R~~~~  251 (337)
T d1o6la_         226 ------------------------------------------------------RTLSPEAKSLLAGLLKKDPKQRLGGG  251 (337)
T ss_dssp             ------------------------------------------------------TTSCHHHHHHHHHHTCSSTTTSTTCS
T ss_pred             ------------------------------------------------------ccCCHHHHHHHHhhccCCchhhcccc
Confidence                                                                  22456899999999999999999   


Q ss_pred             --CHHHHHcCCCCCCc
Q 025467          235 --TAREALRHPFFTRD  248 (252)
Q Consensus       235 --ta~e~l~hpwf~~~  248 (252)
                        |++|+++||||++.
T Consensus       252 ~~~~~eil~Hp~f~~i  267 (337)
T d1o6la_         252 PSDAKEVMEHRFFLSI  267 (337)
T ss_dssp             TTTHHHHHTSGGGTTC
T ss_pred             cccHHHHHcCcccccC
Confidence              49999999999874

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.8e-37  Score=254.13  Aligned_cols=177  Identities=26%  Similarity=0.437  Sum_probs=125.0

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCC-------CCCcc
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERP-------DQNYI   73 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~-------~~~~~   73 (252)
                      ||+|||++||+||||||+|||++.++                           .++++|||++.....       .....
T Consensus       129 ~l~~lH~~~ivHrDlKp~NILl~~~~---------------------------~~kl~dfg~~~~~~~~~~~~~~~~~~~  181 (318)
T d3blha1         129 GLYYIHRNKILHRDMKAANVLITRDG---------------------------VLKLADFGLARAFSLAKNSQPNRYTNR  181 (318)
T ss_dssp             HHHHHHHTTEECCCCCGGGEEECTTS---------------------------CEEECCCTTCEECCC-----CCCCCSC
T ss_pred             HHHHhccCCEEecCcCchheeecCCC---------------------------cEEeeecceeeecccccccccccccce
Confidence            68999999999999999999995544                           456666666543221       11224


Q ss_pred             ccCCCcccchhhhcC-CCCccchhHhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHHHHHHhhcCC
Q 025467           74 VSTRHYRAPEVILGL-GWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGR  152 (252)
Q Consensus        74 ~~t~~y~aPE~l~~~-~~~~~~Diws~G~~l~~l~~g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~  152 (252)
                      +||+.|+|||++.+. .|+.++||||+||++|+|++|+.||.+.++...+..+....+.++.+............     
T Consensus       182 ~gT~~Y~aPE~~~~~~~~~~k~DiwSlGvil~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~-----  256 (318)
T d3blha1         182 VVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPEVWPNVDNYELYE-----  256 (318)
T ss_dssp             CSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTCCCC---------
T ss_pred             ecCHHHhhHHHHcCCCCCCcHHHcccCCceeeeHhhCCCCCCCCCHHHHHHHHHHhcCCCChhhccccchhhhhh-----
Confidence            789999999999865 68999999999999999999999999999889999999999887754322211100000     


Q ss_pred             CCCCccccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCC
Q 025467          153 LDWPEGAASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTD  232 (252)
Q Consensus       153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~  232 (252)
                                 ........+                       .. ..   +.   ......+++++|||.+||++||++
T Consensus       257 -----------~~~~~~~~~-----------------------~~-~~---~~---~~~~~~~~~~~dLl~~mL~~dP~~  295 (318)
T d3blha1         257 -----------KLELVKGQK-----------------------RK-VK---DR---LKAYVRDPYALDLIDKLLVLDPAQ  295 (318)
T ss_dssp             --------------CCSSCC-----------------------BC-HH---HH---HHHHHCCHHHHHHHHHHSCSSTTT
T ss_pred             -----------hhccccccc-----------------------cc-ch---hh---hccccCCHHHHHHHHHHCcCChhH
Confidence                       000000000                       00 00   00   001223568899999999999999


Q ss_pred             CCCHHHHHcCCCCCCccc
Q 025467          233 RLTAREALRHPFFTRDHL  250 (252)
Q Consensus       233 R~ta~e~l~hpwf~~~~~  250 (252)
                      ||||+|+|+||||+.+++
T Consensus       296 R~sa~elL~Hpff~~~p~  313 (318)
T d3blha1         296 RIDSDDALNHDFFWSDPM  313 (318)
T ss_dssp             SCCHHHHHHSGGGSSSSC
T ss_pred             CcCHHHHHcChhhccCCC
Confidence            999999999999998764

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=1e-37  Score=253.92  Aligned_cols=144  Identities=29%  Similarity=0.435  Sum_probs=112.7

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCCCccccCCCcc
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYR   80 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~~~~~~t~~y~   80 (252)
                      ||+|||++|||||||||+|||++.                           ++.+||+|||++....... ...||+.|+
T Consensus       127 aL~yLH~~~iiHrDiKp~NILl~~---------------------------~~~~Kl~DFG~a~~~~~~~-~~~GT~~Y~  178 (309)
T d1u5ra_         127 GLAYLHSHNMIHRDVKAGNILLSE---------------------------PGLVKLGDFGSASIMAPAN-SFVGTPYWM  178 (309)
T ss_dssp             HHHHHHHTTCBCCCCSGGGEEEET---------------------------TTEEEECCCTTCBSSSSBC-CCCSCGGGC
T ss_pred             HHHHHHhCCEeccCCCcceEEECC---------------------------CCCEEEeecccccccCCCC-ccccCcccc
Confidence            689999999999999999999954                           3457777888776544332 347999999


Q ss_pred             cchhhhc---CCCCccchhHhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHHHHHHhhcCCCCCCc
Q 025467           81 APEVILG---LGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPE  157 (252)
Q Consensus        81 aPE~l~~---~~~~~~~Diws~G~~l~~l~~g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~  157 (252)
                      |||++.+   ..|+.++||||+||++|+|++|..||.+.+..+.+..+....  .|                    ... 
T Consensus       179 APE~~~~~~~~~y~~~~DiwSlGvilyel~~g~~Pf~~~~~~~~~~~i~~~~--~~--------------------~~~-  235 (309)
T d1u5ra_         179 APEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNE--SP--------------------ALQ-  235 (309)
T ss_dssp             CHHHHTTTTSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSC--CC--------------------CCS-
T ss_pred             CHHHHhccCCCCcCchhhhhhHHHHHHHHHHCCCCCCCCCHHHHHHHHHhCC--CC--------------------CCC-
Confidence            9999964   358899999999999999999999998776655544432211  00                    000 


Q ss_pred             cccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCCCCCHH
Q 025467          158 GAASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAR  237 (252)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~ta~  237 (252)
                                                                           ....++++.+||.+||+.||++||||+
T Consensus       236 -----------------------------------------------------~~~~s~~~~~li~~~L~~dP~~Rpt~~  262 (309)
T d1u5ra_         236 -----------------------------------------------------SGHWSEYFRNFVDSCLQKIPQDRPTSE  262 (309)
T ss_dssp             -----------------------------------------------------CTTSCHHHHHHHHHHTCSSGGGSCCHH
T ss_pred             -----------------------------------------------------CCCCCHHHHHHHHHHCcCChhHCcCHH
Confidence                                                                 022356899999999999999999999


Q ss_pred             HHHcCCCCCCc
Q 025467          238 EALRHPFFTRD  248 (252)
Q Consensus       238 e~l~hpwf~~~  248 (252)
                      |+|+||||.+.
T Consensus       263 ell~Hp~~~~~  273 (309)
T d1u5ra_         263 VLLKHRFVLRE  273 (309)
T ss_dssp             HHTTCHHHHSC
T ss_pred             HHHhCHHhcCC
Confidence            99999999764

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5e-37  Score=254.57  Aligned_cols=173  Identities=31%  Similarity=0.556  Sum_probs=130.7

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCC--CCccccCCC
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD--QNYIVSTRH   78 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~--~~~~~~t~~   78 (252)
                      ||+|||++||+||||||+|||++.+                          ...+||+|||++......  ....+||..
T Consensus       134 aL~yLH~~~IiHrDiKp~NILl~~~--------------------------~~~~kl~DFG~a~~~~~~~~~~~~~gt~~  187 (350)
T d1q5ka_         134 SLAYIHSFGICHRDIKPQNLLLDPD--------------------------TAVLKLCDFGSAKQLVRGEPNVSYICSRY  187 (350)
T ss_dssp             HHHHHHTTTEECCCCCGGGEEECTT--------------------------TCCEEECCCTTCEECCTTSCCCSCCSCTT
T ss_pred             HHHHHHhcCCcccCCCcceEEEecC--------------------------CCceeEecccchhhccCCccccccccccc
Confidence            6899999999999999999999532                          235788888888654332  233578999


Q ss_pred             cccchhhhcC-CCCccchhHhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHHHHHHhhcCCCCCCc
Q 025467           79 YRAPEVILGL-GWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPE  157 (252)
Q Consensus        79 y~aPE~l~~~-~~~~~~Diws~G~~l~~l~~g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~  157 (252)
                      |+|||.+.+. .|+.++||||+||++|+|++|..||.+.+..+.+..+.+..|.++.+.+........      ...++.
T Consensus       188 y~aPE~~~~~~~~~~~~DIwSlG~il~el~~g~~pf~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~------~~~~~~  261 (350)
T d1q5ka_         188 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYT------EFKFPQ  261 (350)
T ss_dssp             SCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHTSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCC---------CCCCCC
T ss_pred             ccChHHhhcccCCCcceeecccceEEEehhhCCCCCCCCCHHHHHHHHHHHhCCChHHhhhhhccchh------hccccc
Confidence            9999998764 689999999999999999999999999999999999999999988776544321110      000000


Q ss_pred             cccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCCCCCHH
Q 025467          158 GAASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAR  237 (252)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~ta~  237 (252)
                      ...                                           ...........++++.+||.+||++||++||||.
T Consensus       262 ~~~-------------------------------------------~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~  298 (350)
T d1q5ka_         262 IKA-------------------------------------------HPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPL  298 (350)
T ss_dssp             CCC-------------------------------------------CCGGGTSCTTSCHHHHHHHHHHSCSSGGGSCCHH
T ss_pred             ccc-------------------------------------------CchhhhcccCCCHHHHHHHHHHccCChhHCcCHH
Confidence            000                                           0000011234567899999999999999999999


Q ss_pred             HHHcCCCCCCc
Q 025467          238 EALRHPFFTRD  248 (252)
Q Consensus       238 e~l~hpwf~~~  248 (252)
                      |+|+||||+..
T Consensus       299 e~L~Hp~f~~~  309 (350)
T d1q5ka_         299 EACAHSFFDEL  309 (350)
T ss_dssp             HHHTSGGGGGG
T ss_pred             HHhcCHhhccc
Confidence            99999999764

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2e-37  Score=251.61  Aligned_cols=173  Identities=34%  Similarity=0.545  Sum_probs=127.3

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCC---CCccccCC
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD---QNYIVSTR   77 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~---~~~~~~t~   77 (252)
                      ||+|||++|||||||||+|||++                           .+..+|++|||.++.....   .....||+
T Consensus       114 ~L~yLH~~~IiHrDiKpeNIl~~---------------------------~~~~~kl~DFG~a~~~~~~~~~~~~~~gt~  166 (298)
T d1gz8a_         114 GLAFCHSHRVLHRDLKPQNLLIN---------------------------TEGAIKLADFGLARAFGVPVRTYTHEVVTL  166 (298)
T ss_dssp             HHHHHHHTTCCCSCCCGGGEEEC---------------------------TTSCEEECSTTHHHHHCCCSBCTTCCBCCC
T ss_pred             HHHHhhcCCEEccccCchheeec---------------------------ccCcceeccCCcceeccCCcccceeecccc
Confidence            68999999999999999999994                           4456788888877654332   22347899


Q ss_pred             CcccchhhhcCCC-CccchhHhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHHHHHHhhcCCCCCC
Q 025467           78 HYRAPEVILGLGW-TYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWP  156 (252)
Q Consensus        78 ~y~aPE~l~~~~~-~~~~Diws~G~~l~~l~~g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~  156 (252)
                      .|+|||++....+ +.++||||+||++|+|++|+.||.+.+..+.+..+....+.+++..+.......     ......+
T Consensus       167 ~y~apE~~~~~~~~~~~~DiwSlGvily~m~~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~-----~~~~~~~  241 (298)
T d1gz8a_         167 WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMP-----DYKPSFP  241 (298)
T ss_dssp             TTCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGST-----TCCTTSC
T ss_pred             eeeehhhhccccCCCccccccccchhhhHHhhCCCCCCCCCHHHHHHHHHHhcCCCchhhcccccccc-----ccccccc
Confidence            9999999887664 789999999999999999999999988888888888888876543322111000     0000000


Q ss_pred             ccccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCCCCCH
Q 025467          157 EGAASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTA  236 (252)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~ta  236 (252)
                      .                                            .............++++++||++||++||.+||||
T Consensus       242 ~--------------------------------------------~~~~~~~~~~~~~s~~~~dll~~mL~~dP~~R~t~  277 (298)
T d1gz8a_         242 K--------------------------------------------WARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISA  277 (298)
T ss_dssp             C--------------------------------------------CCCCCHHHHSTTCCHHHHHHHHHHTCSSTTTSCCH
T ss_pred             c--------------------------------------------ccccchhhhccCCCHHHHHHHHHHccCChhHCcCH
Confidence            0                                            00001112224567899999999999999999999


Q ss_pred             HHHHcCCCCCCcc
Q 025467          237 REALRHPFFTRDH  249 (252)
Q Consensus       237 ~e~l~hpwf~~~~  249 (252)
                      +|+|+||||++..
T Consensus       278 ~ell~H~ff~~~~  290 (298)
T d1gz8a_         278 KAALAHPFFQDVT  290 (298)
T ss_dssp             HHHHTSGGGTTCC
T ss_pred             HHHhCCHhhccCC
Confidence            9999999998754

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

Probab=100.00  E-value=3.6e-37  Score=248.74  Aligned_cols=171  Identities=30%  Similarity=0.511  Sum_probs=123.5

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCC---CCccccCC
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD---QNYIVSTR   77 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~---~~~~~~t~   77 (252)
                      ||+|||++|||||||||+|||+.                           .++.+|++|||.+......   .....+++
T Consensus       112 ~L~~LH~~~IvHrDiKp~NIll~---------------------------~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~  164 (286)
T d1ob3a_         112 GIAYCHDRRVLHRDLKPQNLLIN---------------------------REGELKIADFGLARAFGIPVRKYTHEIVTL  164 (286)
T ss_dssp             HHHHHHHTTCCCSCCCGGGEEEC---------------------------TTSCEEECCTTHHHHHCC---------CCC
T ss_pred             HHHHhccCcEEecCCCCceeeEc---------------------------CCCCEEecccccceecccCccccceecccc
Confidence            68999999999999999999994                           4556788888887654332   22246888


Q ss_pred             CcccchhhhcC-CCCccchhHhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHHHHHHhhcCCCCCC
Q 025467           78 HYRAPEVILGL-GWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWP  156 (252)
Q Consensus        78 ~y~aPE~l~~~-~~~~~~Diws~G~~l~~l~~g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~  156 (252)
                      .|+|||.+.+. .++.++||||+||++|+|++|+.||.+.+..+++.++....+.++...+......             
T Consensus       165 ~y~~pE~~~~~~~~~~~~DiwslGv~l~el~~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~-------------  231 (286)
T d1ob3a_         165 WYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTEL-------------  231 (286)
T ss_dssp             TTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGS-------------
T ss_pred             hhhhHHHHhCCCCCCcceeehhcCcHHHHHHHCCCCCCCCCHHHHHHHHHHhhCCCChhhccchhhh-------------
Confidence            99999999865 4689999999999999999999999998888899998888887654322111100             


Q ss_pred             ccccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCCCCCH
Q 025467          157 EGAASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTA  236 (252)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~ta  236 (252)
                                     +.......        .             .............++.+.|||++||++||++||||
T Consensus       232 ---------------~~~~~~~~--------~-------------~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~  275 (286)
T d1ob3a_         232 ---------------PKYDPNFT--------V-------------YEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITA  275 (286)
T ss_dssp             ---------------TTCCTTCC--------C-------------CCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCH
T ss_pred             ---------------hhcccccc--------c-------------ccCcchhhhcccCCHHHHHHHHHHccCChhHCcCH
Confidence                           00000000        0             00000112234566789999999999999999999


Q ss_pred             HHHHcCCCCCC
Q 025467          237 REALRHPFFTR  247 (252)
Q Consensus       237 ~e~l~hpwf~~  247 (252)
                      +|+|+||||++
T Consensus       276 ~ell~Hp~f~~  286 (286)
T d1ob3a_         276 KQALEHAYFKE  286 (286)
T ss_dssp             HHHHTSGGGGC
T ss_pred             HHHhcCcccCc
Confidence            99999999974

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.3e-37  Score=245.71  Aligned_cols=141  Identities=27%  Similarity=0.469  Sum_probs=102.7

Q ss_pred             ChhhhhccC-----ccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCC---CCc
Q 025467            1 MFAVMHDLC-----MIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD---QNY   72 (252)
Q Consensus         1 aL~~lH~~~-----ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~---~~~   72 (252)
                      ||+|||++|     |+||||||+|||++.                           ++.+||+|||+++.....   ...
T Consensus       121 al~ylH~~~~~~~~IiHrDiKp~NIll~~---------------------------~~~vkl~DFG~a~~~~~~~~~~~~  173 (269)
T d2java1         121 ALKECHRRSDGGHTVLHRDLKPANVFLDG---------------------------KQNVKLGDFGLARILNHDTSFAKA  173 (269)
T ss_dssp             HHHHHHHHCC---------CCGGGEEECT---------------------------TSCEEECCHHHHHHC---------
T ss_pred             HHHHHHHhcCCCCCEEeCcCchhhcCcCC---------------------------CCcEEEeeccceeecccCCCcccc
Confidence            689999876     999999999999944                           445777777777643322   123


Q ss_pred             cccCCCcccchhhhcCCCCccchhHhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHHHHHHhhcCC
Q 025467           73 IVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGR  152 (252)
Q Consensus        73 ~~~t~~y~aPE~l~~~~~~~~~Diws~G~~l~~l~~g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~  152 (252)
                      .+||+.|+|||++.+..|+.++||||+||++|+|++|..||.+.+..+....+..  +..+                   
T Consensus       174 ~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyel~tg~~Pf~~~~~~~~~~~i~~--~~~~-------------------  232 (269)
T d2java1         174 FVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIRE--GKFR-------------------  232 (269)
T ss_dssp             --CCCSCCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHH--TCCC-------------------
T ss_pred             CCCCcccCCHHHHcCCCCChHHHHHhhCHHHHHHhhCCCCCCCCCHHHHHHHHHc--CCCC-------------------
Confidence            5789999999999998999999999999999999999999987766554443322  1100                   


Q ss_pred             CCCCccccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCC
Q 025467          153 LDWPEGAASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTD  232 (252)
Q Consensus       153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~  232 (252)
                       ..                                                       ....++++.+||.+||+.||.+
T Consensus       233 -~~-------------------------------------------------------~~~~s~~l~~li~~~L~~dp~~  256 (269)
T d2java1         233 -RI-------------------------------------------------------PYRYSDELNEIITRMLNLKDYH  256 (269)
T ss_dssp             -CC-------------------------------------------------------CTTSCHHHHHHHHHHTCSSGGG
T ss_pred             -CC-------------------------------------------------------CcccCHHHHHHHHHHcCCChhH
Confidence             00                                                       1224568999999999999999


Q ss_pred             CCCHHHHHcCCCC
Q 025467          233 RLTAREALRHPFF  245 (252)
Q Consensus       233 R~ta~e~l~hpwf  245 (252)
                      |||++|+|+|||+
T Consensus       257 Rps~~ell~hp~i  269 (269)
T d2java1         257 RPSVEEILENPLI  269 (269)
T ss_dssp             SCCHHHHHTSTTC
T ss_pred             CcCHHHHHhCCcC
Confidence            9999999999995

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

Probab=100.00  E-value=1.4e-36  Score=252.54  Aligned_cols=146  Identities=29%  Similarity=0.471  Sum_probs=111.3

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCC-CCccccCCCc
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD-QNYIVSTRHY   79 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~-~~~~~~t~~y   79 (252)
                      ||+|||++|||||||||+|||++                           ..+.+||+|||+|+..... ....+||+.|
T Consensus       119 aL~ylH~~~iiHrDlKP~NILl~---------------------------~~g~iKl~DFGla~~~~~~~~~~~~GT~~y  171 (364)
T d1omwa3         119 GLEHMHNRFVVYRDLKPANILLD---------------------------EHGHVRISDLGLACDFSKKKPHASVGTHGY  171 (364)
T ss_dssp             HHHHHHHTTEECCCCSGGGEEEC---------------------------SSSCEEECCCTTCEECSSSCCCSCCSCGGG
T ss_pred             HHHHHHHCCccceeeccceeEEc---------------------------CCCcEEEeeeceeeecCCCccccccccccc
Confidence            68999999999999999999994                           4456788888887654333 2335799999


Q ss_pred             ccchhhhc-CCCCccchhHhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHHHHHHhhcCCCCCCcc
Q 025467           80 RAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEG  158 (252)
Q Consensus        80 ~aPE~l~~-~~~~~~~Diws~G~~l~~l~~g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~  158 (252)
                      +|||++.. ..|+.++||||+||++|+|++|..||.+....+...........                    ..     
T Consensus       172 ~APE~~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~~~~~~~~--------------------~~-----  226 (364)
T d1omwa3         172 MAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTM--------------------AV-----  226 (364)
T ss_dssp             CCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCSSCSSCSSCHHHHHHHSSSC--------------------CC-----
T ss_pred             chhHHhhcCCCCCcccchhHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcccC--------------------CC-----
Confidence            99999975 46899999999999999999999999765432221111111000                    00     


Q ss_pred             ccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCCCCC---
Q 025467          159 AASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLT---  235 (252)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~t---  235 (252)
                                                                        ..+...++++.+||.+||+.||++|||   
T Consensus       227 --------------------------------------------------~~~~~~s~~~~~li~~~L~~dP~~R~t~~~  256 (364)
T d1omwa3         227 --------------------------------------------------ELPDSFSPELRSLLEGLLQRDVNRRLGCLG  256 (364)
T ss_dssp             --------------------------------------------------CCCSSSCHHHHHHHHHHTCSSTTTSTTTSS
T ss_pred             --------------------------------------------------CCCCCCCHHHHHHHHHHcccCHHHhCCCcc
Confidence                                                              011235678999999999999999999   


Q ss_pred             --HHHHHcCCCCCCc
Q 025467          236 --AREALRHPFFTRD  248 (252)
Q Consensus       236 --a~e~l~hpwf~~~  248 (252)
                        |+|+++||||++.
T Consensus       257 ~~a~eil~Hp~f~~i  271 (364)
T d1omwa3         257 RGAQEVKESPFFRSL  271 (364)
T ss_dssp             STHHHHHTSGGGTTC
T ss_pred             cCHHHHHcCccccCC
Confidence              8999999999874

>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-jun N-terminal kinase (jnk3s)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.6e-36  Score=249.17  Aligned_cols=185  Identities=29%  Similarity=0.472  Sum_probs=129.8

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCC--CCccccCCC
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD--QNYIVSTRH   78 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~--~~~~~~t~~   78 (252)
                      ||+|||++||+||||||+|||+..+                           ..++++|||.+......  ....++|+.
T Consensus       131 gl~~LH~~giiHrDlKP~Nil~~~~---------------------------~~~kl~df~~~~~~~~~~~~~~~~~t~~  183 (355)
T d2b1pa1         131 GIKHLHSAGIIHRDLKPSNIVVKSD---------------------------CTLKILDFGLARTAGTSFMMTPYVVTRY  183 (355)
T ss_dssp             HHHHHHHTTCCCSCCCGGGEEECTT---------------------------CCEEECCCCC---------------CCT
T ss_pred             HHHHhhhcccccccCCccccccccc---------------------------cceeeechhhhhcccccccccccccccc
Confidence            6899999999999999999999544                           44666777665543332  223478999


Q ss_pred             cccchhhhcCCCCccchhHhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHHHHHHhhcCCCCCCcc
Q 025467           79 YRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEG  158 (252)
Q Consensus        79 y~aPE~l~~~~~~~~~Diws~G~~l~~l~~g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~  158 (252)
                      |+|||++.+..++.++||||+||++++|++|..||.+.+......++....+.++.+.+.........+...........
T Consensus       184 y~aPE~l~~~~~~~~~DiwSlG~~l~ell~g~~pF~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  263 (355)
T d2b1pa1         184 YRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLT  263 (355)
T ss_dssp             TCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHTTSCHHHHHHHHTSCCCCCCC
T ss_pred             ccChhhhcCCCCCCCcccccccchHHHHhhCCCCCCCCCHHHHHHHHHHhccCCCHHHHHHhhhhHHHHhhcCccccccc
Confidence            99999999999999999999999999999999999999999999999998888877776666555444444321110000


Q ss_pred             ccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCCCCCHHH
Q 025467          159 AASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTARE  238 (252)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~ta~e  238 (252)
                            .......                              .............++++.+||++||++||++||||+|
T Consensus       264 ------~~~~~~~------------------------------~~~~~~~~~~~~~s~~~~dll~~mL~~dP~~R~ta~e  307 (355)
T d2b1pa1         264 ------FPKLFPD------------------------------SLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDD  307 (355)
T ss_dssp             ------HHHHSCG------------------------------GGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHH
T ss_pred             ------ccccccc------------------------------ccccccccccccCCHHHHHHHHHHCcCChhHCcCHHH
Confidence                  0000000                              0000001122345678999999999999999999999


Q ss_pred             HHcCCCCCCc
Q 025467          239 ALRHPFFTRD  248 (252)
Q Consensus       239 ~l~hpwf~~~  248 (252)
                      ||+||||+..
T Consensus       308 lL~Hpw~~~~  317 (355)
T d2b1pa1         308 ALQHPYINVW  317 (355)
T ss_dssp             HHTSTTTGGG
T ss_pred             HhcCcccCCC
Confidence            9999999863

>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.4e-36  Score=248.74  Aligned_cols=174  Identities=30%  Similarity=0.528  Sum_probs=129.8

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCCCccccCCCcc
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYR   80 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~~~~~~t~~y~   80 (252)
                      ||+|||++||+||||||+|||++                           .++.++++|||.+...........|++.|+
T Consensus       133 aL~~LH~~giiHrDiKp~NILi~---------------------------~~~~~kl~dfg~a~~~~~~~~~~~g~~~y~  185 (348)
T d2gfsa1         133 GLKYIHSADIIHRDLKPSNLAVN---------------------------EDCELKILDFGLARHTDDEMTGYVATRWYR  185 (348)
T ss_dssp             HHHHHHHTTCCCCCCCGGGEEEC---------------------------TTCCEEECCC----CCTGGGSSSCHHHHTS
T ss_pred             HHHHHHhCCCcccccCCcccccc---------------------------ccccccccccchhcccCccccccccccccc
Confidence            68999999999999999999994                           445678888888766555555567899999


Q ss_pred             cchhhhcCC-CCccchhHhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHHHHHHhhcCCCCCCccc
Q 025467           81 APEVILGLG-WTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGA  159 (252)
Q Consensus        81 aPE~l~~~~-~~~~~Diws~G~~l~~l~~g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~  159 (252)
                      |||++.+.. ++.++||||+||++|+|++|..||.+.+.......+....+..+.+....................+.. 
T Consensus       186 apE~~~~~~~~~~~~DiwSlGv~l~~ll~g~~pF~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-  264 (348)
T d2gfsa1         186 APEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKM-  264 (348)
T ss_dssp             CHHHHTTCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCHHHHTTCCCHHHHHHHTTSCCCCCC-
T ss_pred             CchhhcCCccCCcccchhhhhHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCChHHhhhccchhhhhhhhhcccCCCc-
Confidence            999987764 588999999999999999999999999999999999999888877665443322221111111111100 


Q ss_pred             cchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCCCCCHHHH
Q 025467          160 ASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREA  239 (252)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~ta~e~  239 (252)
                                                                    .........++++++||++||++||.+||||+|+
T Consensus       265 ----------------------------------------------~~~~~~~~~s~~~~dli~~mL~~dP~~R~ta~el  298 (348)
T d2gfsa1         265 ----------------------------------------------NFANVFIGANPLAVDLLEKMLVLDSDKRITAAQA  298 (348)
T ss_dssp             ----------------------------------------------CHHHHSTTCCHHHHHHHHHHSCSSGGGSCCHHHH
T ss_pred             ----------------------------------------------chhhhcCCCCHHHHHHHHHHCcCChhhCcCHHHH
Confidence                                                          0011123456789999999999999999999999


Q ss_pred             HcCCCCCCc
Q 025467          240 LRHPFFTRD  248 (252)
Q Consensus       240 l~hpwf~~~  248 (252)
                      |+||||++.
T Consensus       299 L~Hp~f~~~  307 (348)
T d2gfsa1         299 LAHAYFAQY  307 (348)
T ss_dssp             HTSGGGTTT
T ss_pred             hcCHhhCCC
Confidence            999999863

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.7e-36  Score=245.91  Aligned_cols=143  Identities=29%  Similarity=0.477  Sum_probs=113.9

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCC---CCccccCC
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD---QNYIVSTR   77 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~---~~~~~~t~   77 (252)
                      ||+|||++||+||||||+|||++                           ..+.+||+|||.++.....   .....||+
T Consensus       115 al~ylH~~~iiHrDikp~NiL~~---------------------------~~~~~kl~DFG~a~~~~~~~~~~~~~~gt~  167 (320)
T d1xjda_         115 GLQFLHSKGIVYRDLKLDNILLD---------------------------KDGHIKIADFGMCKENMLGDAKTNTFCGTP  167 (320)
T ss_dssp             HHHHHHHTTCBCCCCCGGGEEEC---------------------------TTSCEEECCCTTCBCCCCTTCCBCCCCSCG
T ss_pred             HHHHHHhCCeeeccCcccceeec---------------------------CCCceeccccchhhhcccccccccccCCCC
Confidence            68999999999999999999994                           4456777777777643322   22357899


Q ss_pred             CcccchhhhcCCCCccchhHhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHHHHHHhhcCCCCCCc
Q 025467           78 HYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPE  157 (252)
Q Consensus        78 ~y~aPE~l~~~~~~~~~Diws~G~~l~~l~~g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~  157 (252)
                      .|+|||++.+..|+.++||||+||++|+|++|+.||.+.+....+..+..                       +.+..| 
T Consensus       168 ~y~aPE~~~~~~~~~~~DiwSlGvilyemltG~~PF~~~~~~~~~~~i~~-----------------------~~~~~p-  223 (320)
T d1xjda_         168 DYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIRM-----------------------DNPFYP-  223 (320)
T ss_dssp             GGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHH-----------------------CCCCCC-
T ss_pred             CcCCHHHHcCCCCCchhhhhhhhHHHHHHHhCCCCCCCCCHHHHHHHHHc-----------------------CCCCCC-
Confidence            99999999999999999999999999999999999998776555444321                       111111 


Q ss_pred             cccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCCCCCHH
Q 025467          158 GAASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAR  237 (252)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~ta~  237 (252)
                                                                            ...++++.+||.+||+.||++|||+.
T Consensus       224 ------------------------------------------------------~~~s~~~~dli~~~L~~dP~~R~s~~  249 (320)
T d1xjda_         224 ------------------------------------------------------RWLEKEAKDLLVKLFVREPEKRLGVR  249 (320)
T ss_dssp             ------------------------------------------------------TTSCHHHHHHHHHHSCSSGGGSBTTB
T ss_pred             ------------------------------------------------------ccCCHHHHHHHHHhcccCCCCCcCHH
Confidence                                                                  12356899999999999999999995


Q ss_pred             -HHHcCCCCCCc
Q 025467          238 -EALRHPFFTRD  248 (252)
Q Consensus       238 -e~l~hpwf~~~  248 (252)
                       ++++||||++.
T Consensus       250 ~~l~~hpff~~~  261 (320)
T d1xjda_         250 GDIRQHPLFREI  261 (320)
T ss_dssp             SCGGGSGGGTTC
T ss_pred             HHHHhCchhccC
Confidence             89999999874

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.9e-35  Score=244.59  Aligned_cols=174  Identities=31%  Similarity=0.565  Sum_probs=125.0

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCC------CCccc
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD------QNYIV   74 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~------~~~~~   74 (252)
                      ||+|||++|||||||||+|||++.                           .+.+||+|||++......      ....+
T Consensus       121 al~yLH~~~iiHRDIKp~NILl~~---------------------------~~~~kl~DfG~a~~~~~~~~~~~~~~~~~  173 (345)
T d1pmea_         121 GLKYIHSANVLHRDLKPSNLLLNT---------------------------TCDLKICDFGLARVADPDHDHTGFLTEYV  173 (345)
T ss_dssp             HHHHHHHTTEECCCCCGGGEEECT---------------------------TCCEEECCCTTCEECCGGGCBCCTTCCCC
T ss_pred             HHHHHHHCCCcCCCCCcceEEECC---------------------------CCCEEEcccCceeeccCCCccceeecccc
Confidence            689999999999999999999954                           445677777776543221      22347


Q ss_pred             cCCCcccchhhhc-CCCCccchhHhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHHHHHHhhcCCC
Q 025467           75 STRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRL  153 (252)
Q Consensus        75 ~t~~y~aPE~l~~-~~~~~~~Diws~G~~l~~l~~g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~  153 (252)
                      ||+.|+|||++.. ..++.++||||+||++|+|++|..||.+.+..+....+....+.++...............     
T Consensus       174 gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~eml~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----  248 (345)
T d1pmea_         174 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNY-----  248 (345)
T ss_dssp             SCGGGCCGGGTTTBCSCSTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHTCCCHHHHHH-----
T ss_pred             ccceechHHHhhcCCCCCchhhhhccCceehHHhhCCCCCCCCCHHHHHHHHhhhccCCChhhhhhhhhhhhhcc-----
Confidence            8999999999854 4678999999999999999999999999888888888888888776544322211100000     


Q ss_pred             CCCccccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCCC
Q 025467          154 DWPEGAASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDR  233 (252)
Q Consensus       154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R  233 (252)
                                    ....+....                            ..........+.++++||.+||++||.+|
T Consensus       249 --------------~~~~~~~~~----------------------------~~~~~~~~~~s~~~~~li~~~L~~dP~~R  286 (345)
T d1pmea_         249 --------------LLSLPHKNK----------------------------VPWNRLFPNADSKALDLLDKMLTFNPHKR  286 (345)
T ss_dssp             --------------HHTSCCCCC----------------------------CCHHHHCTTSCHHHHHHHHHHSCSSTTTS
T ss_pred             --------------cccCCccCC----------------------------CCHHHhCCCCCHHHHHHHHHHccCChhHC
Confidence                          000000000                            00011123456789999999999999999


Q ss_pred             CCHHHHHcCCCCCCc
Q 025467          234 LTAREALRHPFFTRD  248 (252)
Q Consensus       234 ~ta~e~l~hpwf~~~  248 (252)
                      |||+|+|+||||+..
T Consensus       287 ~ta~e~L~hpf~~~~  301 (345)
T d1pmea_         287 IEVEQALAHPYLEQY  301 (345)
T ss_dssp             CCHHHHHTSGGGTTT
T ss_pred             cCHHHHhcCHhhccC
Confidence            999999999999854

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.7e-36  Score=241.90  Aligned_cols=138  Identities=28%  Similarity=0.483  Sum_probs=108.0

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCC-CccccCCCc
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ-NYIVSTRHY   79 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~-~~~~~t~~y   79 (252)
                      ||+|||++||+||||||+|||++.+                          ...+||+|||++....... ....||+.|
T Consensus       122 al~~lH~~~iiHrDiKp~NIll~~~--------------------------~~~vkl~DFG~a~~~~~~~~~~~~GT~~y  175 (273)
T d1xwsa_         122 AVRHCHNCGVLHRDIKDENILIDLN--------------------------RGELKLIDFGSGALLKDTVYTDFDGTRVY  175 (273)
T ss_dssp             HHHHHHHTTEECSCCSGGGEEEETT--------------------------TTEEEECCCTTCEECCSSCBCCCCSCGGG
T ss_pred             HHHHHHHCCCccccCcccceEEecC--------------------------CCeEEECccccceecccccccccccCCCc
Confidence            6899999999999999999999532                          2457888888876543322 335799999


Q ss_pred             ccchhhhcCCC-CccchhHhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHHHHHHhhcCCCCCCcc
Q 025467           80 RAPEVILGLGW-TYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEG  158 (252)
Q Consensus        80 ~aPE~l~~~~~-~~~~Diws~G~~l~~l~~g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~  158 (252)
                      +|||++.+..+ +.++||||+||++|+|++|..||.+.+  .    +.                       .+...++  
T Consensus       176 ~aPE~~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~--~----i~-----------------------~~~~~~~--  224 (273)
T d1xwsa_         176 SPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE--E----II-----------------------RGQVFFR--  224 (273)
T ss_dssp             SCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHH--H----HH-----------------------HCCCCCS--
T ss_pred             CCHHHHcCCCCCCcccccccceeeehhHhhCCCCCCCch--H----Hh-----------------------hcccCCC--
Confidence            99999988765 577899999999999999999996421  1    10                       0111111  


Q ss_pred             ccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCCCCCHHH
Q 025467          159 AASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTARE  238 (252)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~ta~e  238 (252)
                                                                           ...++++.+||.+||+.||++||||+|
T Consensus       225 -----------------------------------------------------~~~s~~~~~li~~~L~~dp~~R~s~~e  251 (273)
T d1xwsa_         225 -----------------------------------------------------QRVSSECQHLIRWCLALRPSDRPTFEE  251 (273)
T ss_dssp             -----------------------------------------------------SCCCHHHHHHHHHHTCSSGGGSCCHHH
T ss_pred             -----------------------------------------------------CCCCHHHHHHHHHHccCCHhHCcCHHH
Confidence                                                                 224568999999999999999999999


Q ss_pred             HHcCCCCCCc
Q 025467          239 ALRHPFFTRD  248 (252)
Q Consensus       239 ~l~hpwf~~~  248 (252)
                      +|+||||++.
T Consensus       252 il~hp~~~~~  261 (273)
T d1xwsa_         252 IQNHPWMQDV  261 (273)
T ss_dssp             HHTSGGGSSC
T ss_pred             HhcCHhhCCC
Confidence            9999999875

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=9.8e-37  Score=250.89  Aligned_cols=154  Identities=28%  Similarity=0.510  Sum_probs=113.8

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCC--CCccccCCC
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD--QNYIVSTRH   78 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~--~~~~~~t~~   78 (252)
                      ||+|||++||+||||||+|||++..+                        ....+||+|||+++.....  ....+||+.
T Consensus       123 al~ylH~~~iiHRDiKp~NIll~~~~------------------------~~~~~Kl~DFG~a~~~~~~~~~~~~~gt~~  178 (335)
T d2ozaa1         123 AIQYLHSINIAHRDVKPENLLYTSKR------------------------PNAILKLTDFGFAKETTSHNSLTTPCYTPY  178 (335)
T ss_dssp             HHHHHHHTTEECCCCSGGGEEESCSS------------------------TTCCEEECCCTTCEECCCCCCCCCCSCCCS
T ss_pred             HHHHHHHcCCcccccccccccccccc------------------------ccccccccccceeeeccCCCccccccCCcc
Confidence            68999999999999999999995432                        2456899999998754332  234589999


Q ss_pred             cccchhhhcCCCCccchhHhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHHHHHHhhcCCCCCCcc
Q 025467           79 YRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEG  158 (252)
Q Consensus        79 y~aPE~l~~~~~~~~~Diws~G~~l~~l~~g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~  158 (252)
                      |+|||++.+..|+.++||||+||++|+|++|..||.+.+.......+...                   ...+...++. 
T Consensus       179 y~aPE~~~~~~y~~~~DiwSlGvily~lltg~~Pf~~~~~~~~~~~~~~~-------------------i~~~~~~~~~-  238 (335)
T d2ozaa1         179 YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTR-------------------IRMGQYEFPN-  238 (335)
T ss_dssp             SCCCCCCCGGGGSHHHHHHHHHHHHHHHTTSSCSCEETTCC--------C-------------------CCSCSSSCCT-
T ss_pred             cCCcHHHcCCCCCHHHHHHhhchhHHHHhhCCCCCCCCCHHHHHHHHHHH-------------------HhcCCCCCCC-
Confidence            99999999888999999999999999999999999765443322211110                   0000111110 


Q ss_pred             ccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCCCCCHHH
Q 025467          159 AASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTARE  238 (252)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~ta~e  238 (252)
                                                                        ..+...++++.+||++||+.||++|||+.|
T Consensus       239 --------------------------------------------------~~~~~~s~~~~~li~~~L~~dP~~R~s~~e  268 (335)
T d2ozaa1         239 --------------------------------------------------PEWSEVSEEVKMLIRNLLKTEPTQRMTITE  268 (335)
T ss_dssp             --------------------------------------------------THHHHSCHHHHHHHHHHSCSSTTTSCCHHH
T ss_pred             --------------------------------------------------cccccCCHHHHHHHHHHccCChhHCcCHHH
Confidence                                                              011235678999999999999999999999


Q ss_pred             HHcCCCCCCc
Q 025467          239 ALRHPFFTRD  248 (252)
Q Consensus       239 ~l~hpwf~~~  248 (252)
                      +|+||||...
T Consensus       269 il~hp~~~~~  278 (335)
T d2ozaa1         269 FMNHPWIMQS  278 (335)
T ss_dssp             HHHSHHHHTT
T ss_pred             HHcCHHhhCC
Confidence            9999999654

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5.3e-36  Score=245.21  Aligned_cols=149  Identities=25%  Similarity=0.434  Sum_probs=120.1

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCC--CccccCCC
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ--NYIVSTRH   78 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~--~~~~~t~~   78 (252)
                      ||+|||++||+||||||+|||++.+                         ....++++|||.+.......  ....+|+.
T Consensus       114 al~yLH~~~iiHrDlKp~NIll~~~-------------------------~~~~ikl~DFG~~~~~~~~~~~~~~~~t~~  168 (321)
T d1tkia_         114 ALQFLHSHNIGHFDIRPENIIYQTR-------------------------RSSTIKIIEFGQARQLKPGDNFRLLFTAPE  168 (321)
T ss_dssp             HHHHHHHTTEECCCCCGGGEEESSS-------------------------SCCCEEECCCTTCEECCTTCEEEEEESCGG
T ss_pred             HHHHHHHcCCCcccccccceeecCC-------------------------CceEEEEcccchhhccccCCcccccccccc
Confidence            6899999999999999999999542                         33467899999887654433  22478899


Q ss_pred             cccchhhhcCCCCccchhHhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHHHHHHhhcCCCCCCcc
Q 025467           79 YRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEG  158 (252)
Q Consensus        79 y~aPE~l~~~~~~~~~Diws~G~~l~~l~~g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~  158 (252)
                      |+|||.+.+..|+.++||||+||++|+|++|..||.+.+..+.+..+....-.+|...                      
T Consensus       169 y~ape~~~~~~~~~~~DiWSlGvily~ll~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~----------------------  226 (321)
T d1tkia_         169 YYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQQIIENIMNAEYTFDEEA----------------------  226 (321)
T ss_dssp             GSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHTCCCCCHHH----------------------
T ss_pred             cccchhccCCCCCchhhcccHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCChhh----------------------
Confidence            9999999998999999999999999999999999998877666665544332222211                      


Q ss_pred             ccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCCCCCHHH
Q 025467          159 AASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTARE  238 (252)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~ta~e  238 (252)
                                                                          +...++++.+||.+||+.||.+|||++|
T Consensus       227 ----------------------------------------------------~~~~s~~~~~li~~~L~~dp~~R~s~~e  254 (321)
T d1tkia_         227 ----------------------------------------------------FKEISIEAMDFVDRLLVKERKSRMTASE  254 (321)
T ss_dssp             ----------------------------------------------------HTTSCHHHHHHHHTTSCSSGGGSCCHHH
T ss_pred             ----------------------------------------------------ccCCCHHHHHHHHHHccCChhHCcCHHH
Confidence                                                                1234568999999999999999999999


Q ss_pred             HHcCCCCCCc
Q 025467          239 ALRHPFFTRD  248 (252)
Q Consensus       239 ~l~hpwf~~~  248 (252)
                      +|+||||+..
T Consensus       255 il~hp~~~~~  264 (321)
T d1tkia_         255 ALQHPWLKQK  264 (321)
T ss_dssp             HHHSHHHHSC
T ss_pred             HhcCHhhccC
Confidence            9999999754

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

Probab=100.00  E-value=1.9e-35  Score=243.07  Aligned_cols=182  Identities=25%  Similarity=0.498  Sum_probs=122.1

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCC--CCccccCCC
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD--QNYIVSTRH   78 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~--~~~~~~t~~   78 (252)
                      ||+|||++||+||||||+|||++.++                          ..++++|||.+......  ....++|+.
T Consensus       141 aL~~LH~~gIvHrDiKp~NILi~~~~--------------------------~~vkl~DFG~a~~~~~~~~~~~~~~t~~  194 (328)
T d3bqca1         141 ALDYCHSMGIMHRDVKPHNVMIDHEH--------------------------RKLRLIDWGLAEFYHPGQEYNVRVASRY  194 (328)
T ss_dssp             HHHHHHHTTEECCCCSGGGEEEETTT--------------------------TEEEECCGGGCEECCTTCCCCSCCSCGG
T ss_pred             HHHHHhhcccccccccccceEEcCCC--------------------------CeeeecccccceeccCCCcccccccCcc
Confidence            68999999999999999999996432                          24678888877654332  233578999


Q ss_pred             cccchhhhcC-CCCccchhHhHHHHHHHHHhCCCCCCCC-ChHHHHHHHHHHhCCCchHHHHHhhHHHHHHhhcCCCCCC
Q 025467           79 YRAPEVILGL-GWTYPCDIWSVGCILVELCTGEALFQTH-ENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWP  156 (252)
Q Consensus        79 y~aPE~l~~~-~~~~~~Diws~G~~l~~l~~g~~pf~~~-~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~  156 (252)
                      |+|||.+.+. .++.++||||+||+++++++|..||... +..++...+...+|.+.....  .        ........
T Consensus       195 y~aPE~~~~~~~~~~~~DiwslG~~l~e~~~g~~pf~~~~~~~~~~~~i~~~~g~~~~~~~--~--------~~~~~~~~  264 (328)
T d3bqca1         195 FKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDY--I--------DKYNIELD  264 (328)
T ss_dssp             GCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHHHHHHCHHHHHHH--H--------HHTTCCCC
T ss_pred             ccCcccccCCCCCCcccchhhhhhhhHHhccCCCCCCCCchhHHHHHHHHHHHCCchhhhh--h--------hhcccccC
Confidence            9999998875 4799999999999999999999999655 445666667777764321110  0        00001000


Q ss_pred             ccccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCCCCCH
Q 025467          157 EGAASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTA  236 (252)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~ta  236 (252)
                      ..      ......         ......+                ............++++.|||++||++||++||||
T Consensus       265 ~~------~~~~~~---------~~~~~~~----------------~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~ta  313 (328)
T d3bqca1         265 PR------FNDILG---------RHSRKRW----------------ERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTA  313 (328)
T ss_dssp             GG------GGGTCC---------CCCCCCG----------------GGGCCTTTGGGCCHHHHHHHHHHSCSSGGGSCCH
T ss_pred             cc------cchhcc---------cccccch----------------hhcccccccccCCHHHHHHHHHHccCChhHCcCH
Confidence            00      000000         0000000                0001112234467789999999999999999999


Q ss_pred             HHHHcCCCCCCcc
Q 025467          237 REALRHPFFTRDH  249 (252)
Q Consensus       237 ~e~l~hpwf~~~~  249 (252)
                      +|+|+||||+...
T Consensus       314 ~e~L~Hp~F~~v~  326 (328)
T d3bqca1         314 REAMEHPYFYTVV  326 (328)
T ss_dssp             HHHHTSGGGTTSC
T ss_pred             HHHhcCcccCCCC
Confidence            9999999999864

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

Probab=100.00  E-value=2.3e-35  Score=236.49  Aligned_cols=146  Identities=33%  Similarity=0.531  Sum_probs=113.6

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCC--CCccccCCC
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD--QNYIVSTRH   78 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~--~~~~~~t~~   78 (252)
                      ||+|||++||+||||||+|||++                           .++.+||+|||.++.....  ....+||+.
T Consensus       122 al~~lH~~~ivHrDlkp~Nill~---------------------------~~~~~kl~DFG~a~~~~~~~~~~~~~gt~~  174 (277)
T d1phka_         122 VICALHKLNIVHRDLKPENILLD---------------------------DDMNIKLTDFGFSCQLDPGEKLREVCGTPS  174 (277)
T ss_dssp             HHHHHHHTTEECSCCSGGGEEEC---------------------------TTCCEEECCCTTCEECCTTCCBCCCCSCGG
T ss_pred             HHHHHHHcCCcccccccceEEEc---------------------------CCCCeEEccchheeEccCCCceeeeeccCC
Confidence            68999999999999999999994                           4556788888888654432  233578999


Q ss_pred             cccchhhhc------CCCCccchhHhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHHHHHHhhcCC
Q 025467           79 YRAPEVILG------LGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGR  152 (252)
Q Consensus        79 y~aPE~l~~------~~~~~~~Diws~G~~l~~l~~g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~  152 (252)
                      |+|||.+.+      ..++.++||||+||++|+|++|..||.+.+.......+....-.+                    
T Consensus       175 y~~PE~~~~~~~~~~~~~~~~~DiwslGvilyeml~g~~Pf~~~~~~~~~~~i~~~~~~~--------------------  234 (277)
T d1phka_         175 YLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQF--------------------  234 (277)
T ss_dssp             GCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCC--------------------
T ss_pred             CCCHHHhhccccccCCCCCchheEcccchhhhhhccCCCCCCCCCHHHHHHHHHhCCCCC--------------------
Confidence            999999863      246789999999999999999999999877655544433211110                    


Q ss_pred             CCCCccccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCC
Q 025467          153 LDWPEGAASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTD  232 (252)
Q Consensus       153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~  232 (252)
                         +.                                                   ......++++++||.+||+.||++
T Consensus       235 ---~~---------------------------------------------------~~~~~~s~~~~~li~~~L~~~p~~  260 (277)
T d1phka_         235 ---GS---------------------------------------------------PEWDDYSDTVKDLVSRFLVVQPQK  260 (277)
T ss_dssp             ---CT---------------------------------------------------TTGGGSCHHHHHHHHHHCCSSGGG
T ss_pred             ---CC---------------------------------------------------cccccCCHHHHHHHHHHccCChhH
Confidence               00                                                   011235678999999999999999


Q ss_pred             CCCHHHHHcCCCCCC
Q 025467          233 RLTAREALRHPFFTR  247 (252)
Q Consensus       233 R~ta~e~l~hpwf~~  247 (252)
                      |||++|||+||||++
T Consensus       261 R~s~~eil~h~~~~~  275 (277)
T d1phka_         261 RYTAEEALAHPFFQQ  275 (277)
T ss_dssp             SCCHHHHTTSGGGCT
T ss_pred             CcCHHHHHcCHHHHH
Confidence            999999999999975

>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Sky1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=3.1e-35  Score=244.82  Aligned_cols=191  Identities=30%  Similarity=0.512  Sum_probs=135.4

Q ss_pred             Chhhhhc-cCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCCCccccCCCc
Q 025467            1 MFAVMHD-LCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHY   79 (252)
Q Consensus         1 aL~~lH~-~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~~~~~~t~~y   79 (252)
                      ||+|||+ +||+||||||+|||+...+..                     .....++++|||.+..........+||+.|
T Consensus       137 al~~lh~~~~IvHrDlKp~NIll~~~~~~---------------------~~~~~~kl~dfg~s~~~~~~~~~~~gt~~y  195 (362)
T d1q8ya_         137 GLDYMHRRCGIIHTDIKPENVLMEIVDSP---------------------ENLIQIKIADLGNACWYDEHYTNSIQTREY  195 (362)
T ss_dssp             HHHHHHHTTCEECSCCSGGGEEEEEEETT---------------------TTEEEEEECCCTTCEETTBCCCSCCSCGGG
T ss_pred             HHHHHhhhcCcccccCChhHeeeeccCcc---------------------cccceeeEeecccccccccccccccccccc
Confidence            6889998 899999999999999654310                     112347899999988766666667899999


Q ss_pred             ccchhhhcCCCCccchhHhHHHHHHHHHhCCCCCCCCC------hHHHHHHHHHHhCCCchHHHHHhhHHHHHHhhcCCC
Q 025467           80 RAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHE------NLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRL  153 (252)
Q Consensus        80 ~aPE~l~~~~~~~~~Diws~G~~l~~l~~g~~pf~~~~------~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~  153 (252)
                      +|||++.+..++.++||||+||++++|++|+.||.+..      ..+.+..+...+|.+|..+..........+...+..
T Consensus       196 ~aPE~~~~~~~~~~~DiwSlG~il~el~~g~~pF~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~  275 (362)
T d1q8ya_         196 RSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIAQIIELLGELPSYLLRNGKYTRTFFNSRGLL  275 (362)
T ss_dssp             CCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC---------CHHHHHHHHHHHHCSCCHHHHHHCTTHHHHBCC--CB
T ss_pred             cChhhccccCCCccccccchHHHHHHHHHCCCCCCCCccccccchhHHHHHHHHHhCCCCHHHhhcccccccccccchhh
Confidence            99999999999999999999999999999999997543      346778888999999887765544333322222111


Q ss_pred             CCCccccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCCC
Q 025467          154 DWPEGAASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDR  233 (252)
Q Consensus       154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R  233 (252)
                      ........ .....                                   ............++++.|||.+||++||.+|
T Consensus       276 ~~~~~~~~-~~~~~-----------------------------------~~~~~~~~~~~~~~~~~dll~~mL~~dP~~R  319 (362)
T d1q8ya_         276 RNISKLKF-WPLED-----------------------------------VLTEKYKFSKDEAKEISDFLSPMLQLDPRKR  319 (362)
T ss_dssp             SSCCCCCB-CCHHH-----------------------------------HHHHTTCCCHHHHHHHHHHHGGGGCSSTTTC
T ss_pred             hccccccC-Cchhh-----------------------------------hcccccccCcccCHHHHHHHHHHCCCChhHC
Confidence            11000000 00000                                   0001112334567799999999999999999


Q ss_pred             CCHHHHHcCCCCCCc
Q 025467          234 LTAREALRHPFFTRD  248 (252)
Q Consensus       234 ~ta~e~l~hpwf~~~  248 (252)
                      |||+|+|+||||++.
T Consensus       320 pta~e~L~Hp~f~~~  334 (362)
T d1q8ya_         320 ADAGGLVNHPWLKDT  334 (362)
T ss_dssp             BCHHHHHTCGGGTTC
T ss_pred             cCHHHHhcCcccCCC
Confidence            999999999999855

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.7e-35  Score=238.33  Aligned_cols=172  Identities=27%  Similarity=0.485  Sum_probs=121.5

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCC---CccccCC
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ---NYIVSTR   77 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~---~~~~~t~   77 (252)
                      ||+|||++||+||||||+|||+.                           ....+|++|||.+.......   ....++.
T Consensus       113 aL~~lH~~~IvHrDiKP~NIli~---------------------------~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~  165 (292)
T d1unla_         113 GLGFCHSRNVLHRDLKPQNLLIN---------------------------RNGELKLANFGLARAFGIPVRCYSAEVVTL  165 (292)
T ss_dssp             HHHHHHHTTEECCCCSGGGEEEC---------------------------TTCCEEECCCTTCEECCSCCSCCCSCCSCG
T ss_pred             HHHHhhcCCEeeecccCcccccc---------------------------cCCceeeeecchhhcccCCCccceeecccc
Confidence            68999999999999999999994                           44567888888886544332   2245678


Q ss_pred             CcccchhhhcCC-CCccchhHhHHHHHHHHHhCCCCC-CCCChHHHHHHHHHHhCCCchHHHHHhhHHHHHHhhcCCCCC
Q 025467           78 HYRAPEVILGLG-WTYPCDIWSVGCILVELCTGEALF-QTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDW  155 (252)
Q Consensus        78 ~y~aPE~l~~~~-~~~~~Diws~G~~l~~l~~g~~pf-~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~  155 (252)
                      .|+|||++.... ++.++||||+||++|+|++|..|| .+.+..+.+..+....+++++.........            
T Consensus       166 ~~~~pe~~~~~~~~~~~~DiwSlG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------  233 (292)
T d1unla_         166 WYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKL------------  233 (292)
T ss_dssp             GGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSSHHHHHHHHHHHHCCCCTTTCTTGGGS------------
T ss_pred             chhhhhHhccCCCCCchhhccccchHHHHHhhCCCCCCCCCCHHHHHHHHHhhcCCCChhhhhhhhhc------------
Confidence            899999988765 689999999999999999999775 555666777777777777654322111100            


Q ss_pred             CccccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCCCCC
Q 025467          156 PEGAASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLT  235 (252)
Q Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~t  235 (252)
                                      +.........                     ............++++.+||++||++||.+|||
T Consensus       234 ----------------~~~~~~~~~~---------------------~~~~~~~~~~~~s~~~~dll~~mL~~dP~~R~s  276 (292)
T d1unla_         234 ----------------PDYKPYPMYP---------------------ATTSLVNVVPKLNATGRDLLQNLLKCNPVQRIS  276 (292)
T ss_dssp             ----------------TTCCCCCCCC---------------------TTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCC
T ss_pred             ----------------cccccccccc---------------------ccchhhhccccCCHHHHHHHHHHccCChhHCcC
Confidence                            0000000000                     000011122445678999999999999999999


Q ss_pred             HHHHHcCCCCCCc
Q 025467          236 AREALRHPFFTRD  248 (252)
Q Consensus       236 a~e~l~hpwf~~~  248 (252)
                      |+|+|+||||++-
T Consensus       277 a~e~L~Hp~f~~~  289 (292)
T d1unla_         277 AEEALQHPYFSDF  289 (292)
T ss_dssp             HHHHTTSGGGSSC
T ss_pred             HHHHhcChhhcCC
Confidence            9999999999864

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.6e-34  Score=230.31  Aligned_cols=143  Identities=22%  Similarity=0.330  Sum_probs=104.1

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCC-----CCcccc
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD-----QNYIVS   75 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~-----~~~~~~   75 (252)
                      ||+|||++|||||||||+|||++.++                           .+||+|||+|+.....     .....|
T Consensus       116 gl~yLH~~~ivHrDlKp~NiLl~~~~---------------------------~~Kl~DFGla~~~~~~~~~~~~~~~~g  168 (276)
T d1uwha_         116 GMDYLHAKSIIHRDLKSNNIFLHEDL---------------------------TVKIGDFGLATVKSRWSGSHQFEQLSG  168 (276)
T ss_dssp             HHHHHHHTTCCCSCCCGGGEEEETTS---------------------------SEEECCCCCSCC------------CCC
T ss_pred             HHHHHhcCCEeccccCHHHEEEcCCC---------------------------CEEEccccceeeccccCCccccccccc
Confidence            68999999999999999999995544                           5666777766543221     123478


Q ss_pred             CCCcccchhhhcC---CCCccchhHhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHHHHHHhhcCC
Q 025467           76 TRHYRAPEVILGL---GWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGR  152 (252)
Q Consensus        76 t~~y~aPE~l~~~---~~~~~~Diws~G~~l~~l~~g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~  152 (252)
                      |+.|+|||++.+.   .|+.++|||||||++|+|++|+.||.+.+....+.......-..|.                  
T Consensus       169 t~~y~APE~l~~~~~~~~~~~sDiwS~Gv~l~el~tg~~Pf~~~~~~~~~~~~~~~~~~~p~------------------  230 (276)
T d1uwha_         169 SILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPD------------------  230 (276)
T ss_dssp             CGGGCCHHHHTTCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHHHHHHTSCCCC------------------
T ss_pred             CcccCCHHHHhcccCCCCCchhhhhhhHHHHHHHHHCCCCCCCCChHHHHHHHHhcCCCCCc------------------
Confidence            9999999999743   5889999999999999999999999877655544333221111110                  


Q ss_pred             CCCCccccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCC
Q 025467          153 LDWPEGAASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTD  232 (252)
Q Consensus       153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~  232 (252)
                                                                            ........++++.+||.+||+.||++
T Consensus       231 ------------------------------------------------------~~~~~~~~~~~l~~li~~cl~~dp~~  256 (276)
T d1uwha_         231 ------------------------------------------------------LSKVRSNCPKAMKRLMAECLKKKRDE  256 (276)
T ss_dssp             ------------------------------------------------------GGGSCTTCCHHHHHHHHHHTCSSGGG
T ss_pred             ------------------------------------------------------chhccccchHHHHHHHHHHcCCCHhH
Confidence                                                                  00111334578999999999999999


Q ss_pred             CCCHHHHHcC
Q 025467          233 RLTAREALRH  242 (252)
Q Consensus       233 R~ta~e~l~h  242 (252)
                      |||++|++++
T Consensus       257 RPt~~~il~~  266 (276)
T d1uwha_         257 RPLFPQILAS  266 (276)
T ss_dssp             SCCHHHHHHH
T ss_pred             CcCHHHHHHH
Confidence            9999999876

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.1e-34  Score=237.84  Aligned_cols=139  Identities=19%  Similarity=0.243  Sum_probs=106.0

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCC-----Ccccc
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ-----NYIVS   75 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~-----~~~~~   75 (252)
                      ||+|||++|||||||||+|||++.++                           .+||+|||+|+......     ....|
T Consensus       176 gl~yLH~~~IiHRDlKp~Nill~~~~---------------------------~~Kl~DFGla~~~~~~~~~~~~~~~~g  228 (325)
T d1rjba_         176 GMEFLEFKSCVHRDLAARNVLVTHGK---------------------------VVKICDFGLARDIMSDSNYVVRGNARL  228 (325)
T ss_dssp             HHHHHHHTTEEETTCSGGGEEEETTT---------------------------EEEECCCGGGSCGGGCTTSEEETTEEE
T ss_pred             HHHHHHhCCeeeccCchhccccccCC---------------------------eEEEeeccccccccCCCceeeeccccC
Confidence            68999999999999999999995544                           56666666665433222     12357


Q ss_pred             CCCcccchhhhcCCCCccchhHhHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHHHHHHhhcCCCC
Q 025467           76 TRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLD  154 (252)
Q Consensus        76 t~~y~aPE~l~~~~~~~~~Diws~G~~l~~l~~-g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~  154 (252)
                      |+.|+|||++.+..|+.++|||||||++|+|++ |..||.+.+....+..+....-                     .+.
T Consensus       229 t~~y~aPE~l~~~~~~~~~DiwS~Gvil~emlt~g~~Pf~~~~~~~~~~~~~~~~~---------------------~~~  287 (325)
T d1rjba_         229 PVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGIPVDANFYKLIQNGF---------------------KMD  287 (325)
T ss_dssp             CGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHHHHHHHHTTC---------------------CCC
T ss_pred             CCccCChHHHcCCCCCcceeccchhHHHHHHHhCCCCCCCCCCHHHHHHHHHhcCC---------------------CCC
Confidence            899999999999999999999999999999997 8999987665444433322110                     011


Q ss_pred             CCccccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCCCC
Q 025467          155 WPEGAASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRL  234 (252)
Q Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~  234 (252)
                      .                                                       +...++++.+||.+||+.||++||
T Consensus       288 ~-------------------------------------------------------p~~~~~~l~~li~~cl~~dP~~RP  312 (325)
T d1rjba_         288 Q-------------------------------------------------------PFYATEEIYIIMQSCWAFDSRKRP  312 (325)
T ss_dssp             C-------------------------------------------------------CTTCCHHHHHHHHHHTCSSGGGSC
T ss_pred             C-------------------------------------------------------CCcCCHHHHHHHHHHcCCChhHCc
Confidence            1                                                       123456899999999999999999


Q ss_pred             CHHHHHcC
Q 025467          235 TAREALRH  242 (252)
Q Consensus       235 ta~e~l~h  242 (252)
                      |++||++|
T Consensus       313 t~~ei~~~  320 (325)
T d1rjba_         313 SFPNLTSF  320 (325)
T ss_dssp             CHHHHHHH
T ss_pred             CHHHHHHH
Confidence            99999975

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=7.2e-34  Score=230.64  Aligned_cols=139  Identities=22%  Similarity=0.298  Sum_probs=100.3

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCC-----CCcccc
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD-----QNYIVS   75 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~-----~~~~~~   75 (252)
                      ||+|||++||+||||||+|||++.++                           .+||+|||+|+.....     .....|
T Consensus       146 gl~ylH~~~ivHrDlKp~NILl~~~~---------------------------~~Kl~DFGla~~~~~~~~~~~~~~~~g  198 (299)
T d1ywna1         146 GMEFLASRKCIHRDLAARNILLSEKN---------------------------VVKICDFGLARDIYKDPDYVRKGDARL  198 (299)
T ss_dssp             HHHHHHHTTCCCSCCCGGGEEECGGG---------------------------CEEECC------CCSCTTSCCTTSCCC
T ss_pred             HHHHHHhCCCcCCcCCccceeECCCC---------------------------cEEEccCcchhhccccccccccCceee
Confidence            68999999999999999999995544                           5666777766533221     122468


Q ss_pred             CCCcccchhhhcCCCCccchhHhHHHHHHHHHhC-CCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHHHHHHhhcCCCC
Q 025467           76 TRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG-EALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLD  154 (252)
Q Consensus        76 t~~y~aPE~l~~~~~~~~~Diws~G~~l~~l~~g-~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~  154 (252)
                      |+.|+|||++.+..++.++||||+||++|+|+++ .+||.+......+........                     .+.
T Consensus       199 t~~y~APE~l~~~~~~~~sDiwS~Gvil~ellt~~~~p~~~~~~~~~~~~~~~~~~---------------------~~~  257 (299)
T d1ywna1         199 PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGT---------------------RMR  257 (299)
T ss_dssp             GGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCCSHHHHHHHHHTC---------------------CCC
T ss_pred             CccccchhHhhcCCCCcccceeehHHHHHHHHhCCCCCCCCCCHHHHHHHHHhcCC---------------------CCC
Confidence            9999999999999999999999999999999986 567876554433332221110                     011


Q ss_pred             CCccccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCCCC
Q 025467          155 WPEGAASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRL  234 (252)
Q Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~  234 (252)
                      .                                                       ....++++.+||.+||+.||++||
T Consensus       258 ~-------------------------------------------------------~~~~~~~l~~li~~cl~~dP~~Rp  282 (299)
T d1ywna1         258 A-------------------------------------------------------PDYTTPEMYQTMLDCWHGEPSQRP  282 (299)
T ss_dssp             C-------------------------------------------------------CTTCCHHHHHHHHHHTCSSGGGSC
T ss_pred             C-------------------------------------------------------CccCCHHHHHHHHHHcCCChhHCc
Confidence            1                                                       123456899999999999999999


Q ss_pred             CHHHHHcC
Q 025467          235 TAREALRH  242 (252)
Q Consensus       235 ta~e~l~h  242 (252)
                      |++|+++|
T Consensus       283 t~~eil~~  290 (299)
T d1ywna1         283 TFSELVEH  290 (299)
T ss_dssp             CHHHHHHH
T ss_pred             CHHHHHHH
Confidence            99999986

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.98  E-value=6.2e-34  Score=228.29  Aligned_cols=96  Identities=28%  Similarity=0.437  Sum_probs=75.4

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCC------Cccc
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ------NYIV   74 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~------~~~~   74 (252)
                      ||+|||++||+||||||+|||++.++.                           ++++|||+++......      ....
T Consensus       119 gl~ylH~~~iiHrDlKp~Nill~~~~~---------------------------~kl~DFGla~~~~~~~~~~~~~~~~~  171 (277)
T d1xbba_         119 GMKYLEESNFVHRDLAARNVLLVTQHY---------------------------AKISDFGLSKALRADENYYKAQTHGK  171 (277)
T ss_dssp             HHHHHHHTTEECSCCSGGGEEEEETTE---------------------------EEECCCTTCEECCTTCSEEEC----C
T ss_pred             HHhhHHhCCcccCCCcchhhcccccCc---------------------------ccccchhhhhhccccccccccccccC
Confidence            689999999999999999999966554                           5556666554332221      1236


Q ss_pred             cCCCcccchhhhcCCCCccchhHhHHHHHHHHHh-CCCCCCCCChHHHHH
Q 025467           75 STRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHENLEHLA  123 (252)
Q Consensus        75 ~t~~y~aPE~l~~~~~~~~~Diws~G~~l~~l~~-g~~pf~~~~~~~~~~  123 (252)
                      ||+.|+|||++.+..++.++|||||||++|+|++ |..||.+.+..+...
T Consensus       172 gt~~y~APE~l~~~~~~~~sDiwS~Gv~l~ellt~g~~Pf~~~~~~~~~~  221 (277)
T d1xbba_         172 WPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTA  221 (277)
T ss_dssp             CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHH
T ss_pred             CCceecCchhhcCCCCCchhhhccchhhhhHHhhCCCCCCCCCCHHHHHH
Confidence            7889999999999899999999999999999997 899998776554433

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.98  E-value=9.1e-34  Score=226.88  Aligned_cols=143  Identities=27%  Similarity=0.376  Sum_probs=106.9

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCC----CccccC
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ----NYIVST   76 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~----~~~~~t   76 (252)
                      ||+|||++||+||||||+|||++.                           ++.+||+|||+|+......    ....||
T Consensus       121 gl~~lH~~~ivHrDiKp~NIll~~---------------------------~~~~Kl~DFGla~~~~~~~~~~~~~~~gt  173 (272)
T d1qpca_         121 GMAFIEERNYIHRDLRAANILVSD---------------------------TLSCKIADFGLARLIEDNEYTAREGAKFP  173 (272)
T ss_dssp             HHHHHHHTTEECSCCSGGGEEECT---------------------------TSCEEECCCTTCEECSSSCEECCTTCCCC
T ss_pred             HHHHHHhCCcccCccchhheeeec---------------------------ccceeeccccceEEccCCccccccccCCc
Confidence            689999999999999999999944                           4456777777776543221    224688


Q ss_pred             CCcccchhhhcCCCCccchhHhHHHHHHHHHhCC-CCCCCCChHHHHHHHHHHhCCCchHHHHHhhHHHHHHhhcCCCCC
Q 025467           77 RHYRAPEVILGLGWTYPCDIWSVGCILVELCTGE-ALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDW  155 (252)
Q Consensus        77 ~~y~aPE~l~~~~~~~~~Diws~G~~l~~l~~g~-~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~  155 (252)
                      +.|+|||++.+..++.++|||||||++|+|++|. +|+...+..+.+..+..  +.                    ....
T Consensus       174 ~~y~APE~~~~~~~~~~sDvwS~Gvvl~ellt~~~~~~~~~~~~~~~~~i~~--~~--------------------~~~~  231 (272)
T d1qpca_         174 IKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLER--GY--------------------RMVR  231 (272)
T ss_dssp             TTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHT--TC--------------------CCCC
T ss_pred             ccccChHHHhCCCCCchhhhhhhHHHHHHHHhCCCCCCCCCCHHHHHHHHHh--cC--------------------CCCC
Confidence            8999999999888999999999999999999955 55555444433332211  00                    0000


Q ss_pred             CccccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCCCCC
Q 025467          156 PEGAASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLT  235 (252)
Q Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~t  235 (252)
                                                                             ....++++.+|+.+||+.||++|||
T Consensus       232 -------------------------------------------------------p~~~~~~l~~li~~cl~~~P~~Rpt  256 (272)
T d1qpca_         232 -------------------------------------------------------PDNCPEELYQLMRLCWKERPEDRPT  256 (272)
T ss_dssp             -------------------------------------------------------CTTCCHHHHHHHHHHTCSSGGGSCC
T ss_pred             -------------------------------------------------------cccChHHHHHHHHHHcCCCHhHCcC
Confidence                                                                   1234568999999999999999999


Q ss_pred             HHHHHc--CCCCCC
Q 025467          236 AREALR--HPFFTR  247 (252)
Q Consensus       236 a~e~l~--hpwf~~  247 (252)
                      ++++++  |+||+.
T Consensus       257 ~~ei~~~L~~~fts  270 (272)
T d1qpca_         257 FDYLRSVLEDFFTA  270 (272)
T ss_dssp             HHHHHHHHHHHHHH
T ss_pred             HHHHHHHhhhhhhc
Confidence            999998  788754

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.98  E-value=3.9e-33  Score=225.99  Aligned_cols=96  Identities=27%  Similarity=0.396  Sum_probs=70.3

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCC--------Cc
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ--------NY   72 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~--------~~   72 (252)
                      ||+|||++||+||||||+|||++.+                           +.+||+|||+++......        ..
T Consensus       140 gl~yLH~~~iiHrDlKp~NILl~~~---------------------------~~~Kl~DFGla~~~~~~~~~~~~~~~~~  192 (299)
T d1jpaa_         140 GMKYLADMNYVHRDLAARNILVNSN---------------------------LVCKVSDFGLSRFLEDDTSDPTYTSALG  192 (299)
T ss_dssp             HHHHHHHTTCCCSCCCGGGEEECTT---------------------------CCEEECCC--------------------
T ss_pred             HHHHHhhCCCccCccccceEEECCC---------------------------CcEEECCcccceEccCCCCcceeeeccc
Confidence            6899999999999999999999544                           456666666665332211        11


Q ss_pred             cccCCCcccchhhhcCCCCccchhHhHHHHHHHHHh-CCCCCCCCChHHHHH
Q 025467           73 IVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHENLEHLA  123 (252)
Q Consensus        73 ~~~t~~y~aPE~l~~~~~~~~~Diws~G~~l~~l~~-g~~pf~~~~~~~~~~  123 (252)
                      ..||+.|+|||++.+..++.++|||||||++|+|++ |..||.+....+.+.
T Consensus       193 ~~~t~~y~aPE~~~~~~~~~~sDvwS~Gvvl~el~t~g~~Pf~~~~~~~~~~  244 (299)
T d1jpaa_         193 GKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMTNQDVIN  244 (299)
T ss_dssp             ---CGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHH
T ss_pred             ccCCccccCHHHHhcCCCCcccccccchHHHHHHHhCCCCCCCCCCHHHHHH
Confidence            356889999999999999999999999999999998 899998776655443

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=3e-33  Score=228.87  Aligned_cols=148  Identities=30%  Similarity=0.444  Sum_probs=108.3

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCC----CCccccC
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD----QNYIVST   76 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~----~~~~~~t   76 (252)
                      ||+|||++||+||||||+|||++.                           ++.++|+|||+++.....    .....|+
T Consensus       141 al~~lH~~~ivHrDiKp~Nill~~---------------------------~~~vkL~DFG~a~~~~~~~~~~~~~~~g~  193 (322)
T d1vzoa_         141 ALEHLHKLGIIYRDIKLENILLDS---------------------------NGHVVLTDFGLSKEFVADETERAYDFCGT  193 (322)
T ss_dssp             HHHHHHHTTCCCCCCCGGGEEECT---------------------------TSCEEESCSSEEEECCGGGGGGGCGGGSC
T ss_pred             HHHHhhcCCEEeccCCccceeecC---------------------------CCCEEEeeccchhhhcccccccccccccc
Confidence            689999999999999999999954                           445677777776543221    1234788


Q ss_pred             CCcccchhhhcC--CCCccchhHhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHHHHHHhhcCCCC
Q 025467           77 RHYRAPEVILGL--GWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLD  154 (252)
Q Consensus        77 ~~y~aPE~l~~~--~~~~~~Diws~G~~l~~l~~g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~  154 (252)
                      +.|++||.+.+.  .++.++||||+||++|+|++|..||.+....+....+....                   ......
T Consensus       194 ~~~~~pe~~~~~~~~~~~ksDIWSlG~iLyelltG~~PF~~~~~~~~~~~i~~~~-------------------~~~~~~  254 (322)
T d1vzoa_         194 IEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISRRI-------------------LKSEPP  254 (322)
T ss_dssp             CTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCCCHHHHHHHH-------------------HHCCCC
T ss_pred             cccchhHHhhcCCcCCCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhc-------------------ccCCCC
Confidence            999999999765  36789999999999999999999998765433222221110                   000111


Q ss_pred             CCccccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCCCC
Q 025467          155 WPEGAASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRL  234 (252)
Q Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~  234 (252)
                      .                                                       ....++++.+||.+||++||.+||
T Consensus       255 ~-------------------------------------------------------~~~~s~~~~~li~~~l~~dP~~R~  279 (322)
T d1vzoa_         255 Y-------------------------------------------------------PQEMSALAKDLIQRLLMKDPKKRL  279 (322)
T ss_dssp             C-------------------------------------------------------CTTSCHHHHHHHHHHTCSSGGGST
T ss_pred             C-------------------------------------------------------cccCCHHHHHHHHHHcccCHHHcC
Confidence            1                                                       123467999999999999999999


Q ss_pred             -----CHHHHHcCCCCCCcc
Q 025467          235 -----TAREALRHPFFTRDH  249 (252)
Q Consensus       235 -----ta~e~l~hpwf~~~~  249 (252)
                           ||+|+++||||++..
T Consensus       280 s~~~~t~~eil~Hpff~~i~  299 (322)
T d1vzoa_         280 GCGPRDADEIKEHLFFQKIN  299 (322)
T ss_dssp             TSSTTTHHHHHTSGGGTTCC
T ss_pred             CCCcccHHHHHcCHhhcCCC
Confidence                 599999999998743

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=1.3e-33  Score=227.06  Aligned_cols=142  Identities=25%  Similarity=0.385  Sum_probs=107.2

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCC------CCccc
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD------QNYIV   74 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~------~~~~~   74 (252)
                      ||+|||++||+||||||+|||++.++.                           +||+|||+++.....      .....
T Consensus       121 gL~ylH~~~iiHrDlKp~Nill~~~~~---------------------------~Kl~DFGla~~~~~~~~~~~~~~~~~  173 (285)
T d1u59a_         121 GMKYLEEKNFVHRDLAARNVLLVNRHY---------------------------AKISDFGLSKALGADDSYYTARSAGK  173 (285)
T ss_dssp             HHHHHHHTTEECCCCSGGGEEEEETTE---------------------------EEECCCTTCEECTTCSCEECCCCSSC
T ss_pred             HHHHHHhCCeecCcCchhheeeccCCc---------------------------eeeccchhhhcccccccccccccccc
Confidence            689999999999999999999966554                           556666655433221      11236


Q ss_pred             cCCCcccchhhhcCCCCccchhHhHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHHHHHHhhcCCC
Q 025467           75 STRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRL  153 (252)
Q Consensus        75 ~t~~y~aPE~l~~~~~~~~~Diws~G~~l~~l~~-g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~  153 (252)
                      ||+.|+|||++.+..++.++|||||||++|++++ |..||.+.+..+....+..  |.                    ++
T Consensus       174 gt~~y~aPE~~~~~~~~~ksDVwS~Gv~l~E~lt~G~~Pf~~~~~~~~~~~i~~--~~--------------------~~  231 (285)
T d1u59a_         174 WPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQ--GK--------------------RM  231 (285)
T ss_dssp             CCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCTHHHHHHHHT--TC--------------------CC
T ss_pred             cCccccChHHHhCCCCCccchhhcchHHHHHHHhCCCCCCCCCCHHHHHHHHHc--CC--------------------CC
Confidence            7889999999998899999999999999999998 8999987766554433221  10                    01


Q ss_pred             CCCccccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCCC
Q 025467          154 DWPEGAASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDR  233 (252)
Q Consensus       154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R  233 (252)
                      ..                                                       +...++++.+||.+||+.||++|
T Consensus       232 ~~-------------------------------------------------------p~~~~~~l~~li~~cl~~~p~~R  256 (285)
T d1u59a_         232 EC-------------------------------------------------------PPECPPELYALMSDCWIYKWEDR  256 (285)
T ss_dssp             CC-------------------------------------------------------CTTCCHHHHHHHHHTTCSSGGGS
T ss_pred             CC-------------------------------------------------------CCcCCHHHHHHHHHHcCCCHhHC
Confidence            11                                                       12345689999999999999999


Q ss_pred             CCHHHH---HcCCCCC
Q 025467          234 LTAREA---LRHPFFT  246 (252)
Q Consensus       234 ~ta~e~---l~hpwf~  246 (252)
                      ||+.++   |+|+|+.
T Consensus       257 Ps~~~i~~~L~~~~~~  272 (285)
T d1u59a_         257 PDFLTVEQRMRACYYS  272 (285)
T ss_dssp             CCHHHHHHHHHHHHHH
T ss_pred             cCHHHHHHHHHHHHHH
Confidence            999888   5677764

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=5.9e-33  Score=221.13  Aligned_cols=138  Identities=25%  Similarity=0.400  Sum_probs=97.5

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCC----CccccC
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ----NYIVST   76 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~----~~~~~t   76 (252)
                      ||+|||+++|+||||||+|||++.++                           .+||+|||+++......    ....||
T Consensus       113 gl~~lH~~~iiHrDlKp~Nill~~~~---------------------------~~Kl~DFGla~~~~~~~~~~~~~~~gt  165 (263)
T d1sm2a_         113 GMAYLEEACVIHRDLAARNCLVGENQ---------------------------VIKVSDFGMTRFVLDDQYTSSTGTKFP  165 (263)
T ss_dssp             HHHHHHHTTCCCTTCSGGGEEECGGG---------------------------CEEECSCC------------------C
T ss_pred             HHHhhhccceeecccchhheeecCCC---------------------------CeEecccchheeccCCCceeecceecC
Confidence            68999999999999999999995544                           56666776665432221    124678


Q ss_pred             CCcccchhhhcCCCCccchhHhHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHHHHHHhhcCCCCC
Q 025467           77 RHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDW  155 (252)
Q Consensus        77 ~~y~aPE~l~~~~~~~~~Diws~G~~l~~l~~-g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~  155 (252)
                      +.|+|||++.+..|+.++|||||||++|+|++ |.+||...+..+.+..+....                      ....
T Consensus       166 ~~y~aPE~l~~~~~~~k~DVwS~Gvil~el~t~~~~~~~~~~~~~~~~~i~~~~----------------------~~~~  223 (263)
T d1sm2a_         166 VKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGF----------------------RLYK  223 (263)
T ss_dssp             TTSCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSCCHHHHHHHHHHTC----------------------CCCC
T ss_pred             cccCChHHhcCCCCCchhhhcchHHHHHHHHHCCCCCCCCCCHHHHHHHHHhcC----------------------CCCC
Confidence            99999999999999999999999999999999 566676655544443332210                      0000


Q ss_pred             CccccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCCCCC
Q 025467          156 PEGAASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLT  235 (252)
Q Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~t  235 (252)
                                                                             +...++++.+|+.+||+.||++|||
T Consensus       224 -------------------------------------------------------p~~~~~~l~~li~~cl~~~p~~Rps  248 (263)
T d1sm2a_         224 -------------------------------------------------------PRLASTHVYQIMNHCWKERPEDRPA  248 (263)
T ss_dssp             -------------------------------------------------------CTTSCHHHHHHHHHHTCSSGGGSCC
T ss_pred             -------------------------------------------------------ccccCHHHHHHHHHHccCCHhHCcC
Confidence                                                                   1123468899999999999999999


Q ss_pred             HHHHHcC
Q 025467          236 AREALRH  242 (252)
Q Consensus       236 a~e~l~h  242 (252)
                      ++|+++|
T Consensus       249 ~~~il~~  255 (263)
T d1sm2a_         249 FSRLLRQ  255 (263)
T ss_dssp             HHHHHHH
T ss_pred             HHHHHHH
Confidence            9999986

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=1.2e-32  Score=218.43  Aligned_cols=138  Identities=22%  Similarity=0.361  Sum_probs=106.6

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCC----CccccC
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ----NYIVST   76 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~----~~~~~t   76 (252)
                      ||+|||++||+||||||+|||++.                           ...+||+|||+++......    ....||
T Consensus       112 gl~~LH~~~iiH~dlk~~Nill~~---------------------------~~~~kl~DfG~a~~~~~~~~~~~~~~~~t  164 (258)
T d1k2pa_         112 AMEYLESKQFLHRDLAARNCLVND---------------------------QGVVKVSDFGLSRYVLDDEYTSSVGSKFP  164 (258)
T ss_dssp             HHHHHHHTTBCCSCCSGGGEEECT---------------------------TCCEEECCCSSCCBCSSSSCCCCCCSCCC
T ss_pred             HHHHHhhcCcccccccceeEEEcC---------------------------CCcEEECcchhheeccCCCceeecccCCC
Confidence            689999999999999999999954                           4456777777765432221    124678


Q ss_pred             CCcccchhhhcCCCCccchhHhHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHHHHHHhhcCCCCC
Q 025467           77 RHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDW  155 (252)
Q Consensus        77 ~~y~aPE~l~~~~~~~~~Diws~G~~l~~l~~-g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~  155 (252)
                      +.|+|||++.+..++.++|||||||++|+|++ |+.||.+.+..+....+....                      +...
T Consensus       165 ~~y~aPE~~~~~~~~~ksDiwS~G~~l~el~t~g~~Pf~~~~~~~~~~~i~~~~----------------------~~~~  222 (258)
T d1k2pa_         165 VRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGL----------------------RLYR  222 (258)
T ss_dssp             GGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCHHHHHHHHHTTC----------------------CCCC
T ss_pred             CCcCCcHHhcCCCCCcceeecccchhhHhHHhcCCCCCCCCCHHHHHHHHHhCC----------------------CCCC
Confidence            89999999999999999999999999999998 899998877665544332210                      0111


Q ss_pred             CccccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCCCCC
Q 025467          156 PEGAASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLT  235 (252)
Q Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~t  235 (252)
                      |                                                       ...++++.+||.+||+.||++|||
T Consensus       223 p-------------------------------------------------------~~~~~~l~~li~~cl~~dP~~RPt  247 (258)
T d1k2pa_         223 P-------------------------------------------------------HLASEKVYTIMYSCWHEKADERPT  247 (258)
T ss_dssp             C-------------------------------------------------------TTCCHHHHHHHHHTTCSSGGGSCC
T ss_pred             c-------------------------------------------------------ccccHHHHHHHHHHccCCHhHCcC
Confidence            1                                                       123468999999999999999999


Q ss_pred             HHHHHcC
Q 025467          236 AREALRH  242 (252)
Q Consensus       236 a~e~l~h  242 (252)
                      ++++++|
T Consensus       248 ~~eil~~  254 (258)
T d1k2pa_         248 FKILLSN  254 (258)
T ss_dssp             HHHHHHH
T ss_pred             HHHHHHH
Confidence            9999986

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.97  E-value=9.8e-33  Score=222.36  Aligned_cols=91  Identities=23%  Similarity=0.307  Sum_probs=72.1

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCCC----ccccC
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQN----YIVST   76 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~~----~~~~t   76 (252)
                      ||+|||++||+||||||+|||++.+                           +.+||+|||+++.......    ...|+
T Consensus       127 gL~yLH~~~iiHrDlKp~NILl~~~---------------------------~~~Kl~DFG~a~~~~~~~~~~~~~~~g~  179 (287)
T d1opja_         127 AMEYLEKKNFIHRDLAARNCLVGEN---------------------------HLVKVADFGLSRLMTGDTYTAHAGAKFP  179 (287)
T ss_dssp             HHHHHHHTTCCCSCCSGGGEEECGG---------------------------GCEEECCCCCTTTCCSSSSEEETTEEEC
T ss_pred             HHHHHHHCCcccCccccCeEEECCC---------------------------CcEEEccccceeecCCCCceeecccccc
Confidence            6899999999999999999999554                           4567777777664433221    13578


Q ss_pred             CCcccchhhhcCCCCccchhHhHHHHHHHHHhCCCCCCCCCh
Q 025467           77 RHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHEN  118 (252)
Q Consensus        77 ~~y~aPE~l~~~~~~~~~Diws~G~~l~~l~~g~~pf~~~~~  118 (252)
                      +.|+|||++.+..|+.++||||+||++|+|++|..||....+
T Consensus       180 ~~y~aPE~~~~~~~~~k~DiwS~Gv~l~ell~~~~p~~~~~~  221 (287)
T d1opja_         180 IKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGID  221 (287)
T ss_dssp             GGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCSSTTCC
T ss_pred             ccccChHHHcCCCCCchhhhhhHHHHHHHHHhCCCCCCCcch
Confidence            899999999999999999999999999999997666544333

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=3.2e-32  Score=219.04  Aligned_cols=91  Identities=26%  Similarity=0.346  Sum_probs=67.7

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCC------Cccc
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ------NYIV   74 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~------~~~~   74 (252)
                      ||+|||+++|+||||||+|||++.                           ++.+||+|||+++......      ....
T Consensus       122 gl~~lH~~~iiHrDlKp~NILl~~---------------------------~~~~Kl~DFGla~~~~~~~~~~~~~~~~~  174 (283)
T d1mqba_         122 GMKYLANMNYVHRDLAARNILVNS---------------------------NLVCKVSDFGLSRVLEDDPEATYTTSGGK  174 (283)
T ss_dssp             HHHHHHHTTCCCSCCCGGGEEECT---------------------------TCCEEECCCCC-----------------C
T ss_pred             hhhhccccccccCccccceEEECC---------------------------CCeEEEcccchhhcccCCCccceEeccCC
Confidence            689999999999999999999954                           4456777777765432211      1235


Q ss_pred             cCCCcccchhhhcCCCCccchhHhHHHHHHHHHhCCCC-CCCCCh
Q 025467           75 STRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEAL-FQTHEN  118 (252)
Q Consensus        75 ~t~~y~aPE~l~~~~~~~~~Diws~G~~l~~l~~g~~p-f~~~~~  118 (252)
                      ||+.|+|||++.+..++.++|||||||++|+|+++..| +.....
T Consensus       175 gt~~Y~APE~l~~~~~~~~sDI~S~Gvil~el~t~~~~~~~~~~~  219 (283)
T d1mqba_         175 IPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSN  219 (283)
T ss_dssp             CCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCH
T ss_pred             CCccccCHHHHccCCCCCcccccccHHHHHHHHhCCCCccccCCH
Confidence            78899999999999999999999999999999996555 444333

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=1.1e-32  Score=225.32  Aligned_cols=138  Identities=25%  Similarity=0.316  Sum_probs=103.2

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCC-----Ccccc
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ-----NYIVS   75 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~-----~~~~~   75 (252)
                      ||+|||++||+||||||+|||++.++                           .+||+|||+++......     ....|
T Consensus       123 gl~yLH~~~iiHrDlKp~NIll~~~~---------------------------~~kl~DFGla~~~~~~~~~~~~~~~~g  175 (317)
T d1xkka_         123 GMNYLEDRRLVHRDLAARNVLVKTPQ---------------------------HVKITDFGLAKLLGAEEKEYHAEGGKV  175 (317)
T ss_dssp             HHHHHHHTTCCCSCCCGGGEEEEETT---------------------------EEEECCCSHHHHTTTTCC--------C
T ss_pred             HHHHHHHcCcccCcchhhcceeCCCC---------------------------CeEeeccccceeccccccccccccccc
Confidence            68999999999999999999996554                           45666666665432211     12357


Q ss_pred             CCCcccchhhhcCCCCccchhHhHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHHHHHHhhcCCCC
Q 025467           76 TRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLD  154 (252)
Q Consensus        76 t~~y~aPE~l~~~~~~~~~Diws~G~~l~~l~~-g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~  154 (252)
                      |+.|+|||++.+..|+.++|||||||++|+|++ |.+||.+.+..+....+..  |                    .++.
T Consensus       176 t~~y~APE~l~~~~~~~~sDvwS~Gvil~el~t~g~~p~~~~~~~~~~~~i~~--~--------------------~~~~  233 (317)
T d1xkka_         176 PIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEK--G--------------------ERLP  233 (317)
T ss_dssp             CTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCGGGHHHHHHH--T--------------------CCCC
T ss_pred             CccccChHHHhcCCCChhhhhhhHHHHHHHHHHCCCCCCCCCCHHHHHHHHHc--C--------------------CCCC
Confidence            899999999999999999999999999999998 7899987655443322211  0                    0011


Q ss_pred             CCccccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCCCC
Q 025467          155 WPEGAASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRL  234 (252)
Q Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~  234 (252)
                      .                                                       +...++++.+|+.+||..||.+||
T Consensus       234 ~-------------------------------------------------------p~~~~~~~~~li~~cl~~dP~~RP  258 (317)
T d1xkka_         234 Q-------------------------------------------------------PPICTIDVYMIMVKCWMIDADSRP  258 (317)
T ss_dssp             C-------------------------------------------------------CTTBCHHHHHHHHHHTCSSGGGSC
T ss_pred             C-------------------------------------------------------CcccCHHHHHHHHHhCCCChhhCc
Confidence            1                                                       123456899999999999999999


Q ss_pred             CHHHHHcC
Q 025467          235 TAREALRH  242 (252)
Q Consensus       235 ta~e~l~h  242 (252)
                      |+.|+++|
T Consensus       259 s~~eil~~  266 (317)
T d1xkka_         259 KFRELIIE  266 (317)
T ss_dssp             CHHHHHHH
T ss_pred             CHHHHHHH
Confidence            99999987

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=9.2e-33  Score=221.23  Aligned_cols=138  Identities=26%  Similarity=0.372  Sum_probs=99.3

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCC----CCccccC
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD----QNYIVST   76 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~----~~~~~~t   76 (252)
                      ||+|||++||+||||||+||+++.++                           .+||+|||+++.....    .....||
T Consensus       120 gl~ylH~~~iiHrDlKp~NIll~~~~---------------------------~~Kl~DfG~a~~~~~~~~~~~~~~~gt  172 (273)
T d1mp8a_         120 ALAYLESKRFVHRDIAARNVLVSSND---------------------------CVKLGDFGLSRYMEDSTYYKASKGKLP  172 (273)
T ss_dssp             HHHHHHHTTCCCSCCSGGGEEEEETT---------------------------EEEECC-------------------CC
T ss_pred             HhhhhcccCeeccccchhheeecCCC---------------------------cEEEccchhheeccCCcceeccceecC
Confidence            68999999999999999999996544                           4666666666543221    1224678


Q ss_pred             CCcccchhhhcCCCCccchhHhHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHHHHHHhhcCCCCC
Q 025467           77 RHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDW  155 (252)
Q Consensus        77 ~~y~aPE~l~~~~~~~~~Diws~G~~l~~l~~-g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~  155 (252)
                      +.|+|||++.+..|+.++|||||||++|+|++ |.+||.+.+..+....+..  +.                    ... 
T Consensus       173 ~~y~apE~l~~~~~~~~~DiwSlGvil~e~lt~g~~P~~~~~~~~~~~~i~~--~~--------------------~~~-  229 (273)
T d1mp8a_         173 IKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIEN--GE--------------------RLP-  229 (273)
T ss_dssp             GGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHHT--TC--------------------CCC-
T ss_pred             cccchhhHhccCCCCCccccccchHHHHHHHhcCCCCCCCCCHHHHHHHHHc--CC--------------------CCC-
Confidence            89999999999999999999999999999988 8999987766554433221  10                    010 


Q ss_pred             CccccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCCCCC
Q 025467          156 PEGAASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLT  235 (252)
Q Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~t  235 (252)
                                                                            .+...++++.+||.+||+.||++|||
T Consensus       230 ------------------------------------------------------~~~~~~~~~~~li~~cl~~dp~~Rps  255 (273)
T d1mp8a_         230 ------------------------------------------------------MPPNCPPTLYSLMTKCWAYDPSRRPR  255 (273)
T ss_dssp             ------------------------------------------------------CCTTCCHHHHHHHHHHTCSSGGGSCC
T ss_pred             ------------------------------------------------------CCCCCCHHHHHHHHHHcCCCHhHCcC
Confidence                                                                  11234568999999999999999999


Q ss_pred             HHHHHcC
Q 025467          236 AREALRH  242 (252)
Q Consensus       236 a~e~l~h  242 (252)
                      ++|+++|
T Consensus       256 ~~ei~~~  262 (273)
T d1mp8a_         256 FTELKAQ  262 (273)
T ss_dssp             HHHHHHH
T ss_pred             HHHHHHH
Confidence            9999875

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=2.4e-32  Score=219.58  Aligned_cols=146  Identities=26%  Similarity=0.346  Sum_probs=105.2

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCC----CCccccC
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD----QNYIVST   76 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~----~~~~~~t   76 (252)
                      ||+|||++||+||||||+|||++.+                           +.+||+|||+++.....    .....||
T Consensus       125 gl~~LH~~~ivH~DlKp~NIll~~~---------------------------~~~kl~DfGla~~~~~~~~~~~~~~~gt  177 (285)
T d1fmka3         125 GMAYVERMNYVHRDLRAANILVGEN---------------------------LVCKVADFGLARLIEDNEYTARQGAKFP  177 (285)
T ss_dssp             HHHHHHHTTCCCSCCSGGGEEECGG---------------------------GCEEECCCCTTC--------------CC
T ss_pred             HHHHHhhhheecccccceEEEECCC---------------------------CcEEEcccchhhhccCCCceeecccccc
Confidence            6899999999999999999999554                           45667777766543221    1224688


Q ss_pred             CCcccchhhhcCCCCccchhHhHHHHHHHHHhCCCC-CCCCChHHHHHHHHHHhCCCchHHHHHhhHHHHHHhhcCCCCC
Q 025467           77 RHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEAL-FQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDW  155 (252)
Q Consensus        77 ~~y~aPE~l~~~~~~~~~Diws~G~~l~~l~~g~~p-f~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~  155 (252)
                      +.|+|||++....++.++|||||||++|+|++|..| +.+....+.+..+....                      ... 
T Consensus       178 ~~y~aPE~~~~~~~~~ksDI~S~Giil~el~t~~~p~~~~~~~~~~~~~i~~~~----------------------~~~-  234 (285)
T d1fmka3         178 IKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGY----------------------RMP-  234 (285)
T ss_dssp             GGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTTC----------------------CCC-
T ss_pred             ccccChHHHhCCCCCcHHhhhcchHHHHHHHhCCCCCCCCCCHHHHHHHHHhcC----------------------CCC-
Confidence            999999999999999999999999999999996555 45444433333221100                      000 


Q ss_pred             CccccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCCCCC
Q 025467          156 PEGAASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLT  235 (252)
Q Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~t  235 (252)
                                                                            .....++++++||.+||+.||++|||
T Consensus       235 ------------------------------------------------------~~~~~~~~l~~li~~cl~~dP~~Rps  260 (285)
T d1fmka3         235 ------------------------------------------------------CPPECPESLHDLMCQCWRKEPEERPT  260 (285)
T ss_dssp             ------------------------------------------------------CCTTSCHHHHHHHHHHTCSSGGGSCC
T ss_pred             ------------------------------------------------------CCcccCHHHHHHHHHHcccCHhHCcC
Confidence                                                                  01234568999999999999999999


Q ss_pred             HHHHHc--CCCCCCccc
Q 025467          236 AREALR--HPFFTRDHL  250 (252)
Q Consensus       236 a~e~l~--hpwf~~~~~  250 (252)
                      ++++++  ++||+..+.
T Consensus       261 ~~~i~~~L~~~~~~~~p  277 (285)
T d1fmka3         261 FEYLQAFLEDYFTSTEP  277 (285)
T ss_dssp             HHHHHHHHHTTTSCSCC
T ss_pred             HHHHHHHHhhhhcCCCC
Confidence            999998  999976543

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=99.97  E-value=3.8e-32  Score=218.09  Aligned_cols=98  Identities=28%  Similarity=0.478  Sum_probs=72.6

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCC------CCCccc
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERP------DQNYIV   74 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~------~~~~~~   74 (252)
                      ||+|||++||+||||||+|||++.++.                           .+++|||.+.....      .....+
T Consensus       123 al~~lH~~~iiHrDiKP~NIll~~~~~---------------------------~~l~d~~~~~~~~~~~~~~~~~~~~~  175 (277)
T d1o6ya_         123 ALNFSHQNGIIHRDVKPANIMISATNA---------------------------VKVMDFGIARAIADSGNSVTQTAAVI  175 (277)
T ss_dssp             HHHHHHHTTEECCCCSGGGEEEETTSC---------------------------EEECCCTTCEECC-------------
T ss_pred             HHHHHHhCCccCccccCcccccCcccc---------------------------ceeehhhhhhhhcccccccccccccc
Confidence            689999999999999999999966554                           45555555432211      112347


Q ss_pred             cCCCcccchhhhcCCCCccchhHhHHHHHHHHHhCCCCCCCCChHHHHHHH
Q 025467           75 STRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMM  125 (252)
Q Consensus        75 ~t~~y~aPE~l~~~~~~~~~Diws~G~~l~~l~~g~~pf~~~~~~~~~~~~  125 (252)
                      ||+.|+|||++.+..++.++||||+||++|+|++|..||.+.+..+.+.++
T Consensus       176 Gt~~Y~aPE~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~~  226 (277)
T d1o6ya_         176 GTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQH  226 (277)
T ss_dssp             ---TTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHH
T ss_pred             CcccccCHHHHcCCCCCcceecccchHHHHHHHhCCCCCCCcCHHHHHHHH
Confidence            899999999999989999999999999999999999999887665554433

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=4.7e-32  Score=216.81  Aligned_cols=98  Identities=22%  Similarity=0.325  Sum_probs=76.8

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCC------Cccc
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ------NYIV   74 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~------~~~~   74 (252)
                      ||+|||++||+||||||+|||++.++                           .+||+|||+++......      ....
T Consensus       123 gl~ylH~~~iiHrDikp~NIll~~~~---------------------------~vkl~DfGl~~~~~~~~~~~~~~~~~~  175 (273)
T d1u46a_         123 GMGYLESKRFIHRDLAARNLLLATRD---------------------------LVKIGDFGLMRALPQNDDHYVMQEHRK  175 (273)
T ss_dssp             HHHHHHHTTEECSCCCGGGEEEEETT---------------------------EEEECCCTTCEECCC-CCEEEC-----
T ss_pred             HHHHhhhCCEeeeeecHHHhcccccc---------------------------ceeeccchhhhhcccCCCcceecCccc
Confidence            68999999999999999999996554                           45666666665432221      1235


Q ss_pred             cCCCcccchhhhcCCCCccchhHhHHHHHHHHHh-CCCCCCCCChHHHHHHH
Q 025467           75 STRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHENLEHLAMM  125 (252)
Q Consensus        75 ~t~~y~aPE~l~~~~~~~~~Diws~G~~l~~l~~-g~~pf~~~~~~~~~~~~  125 (252)
                      |+..|+|||++.+..++.++|||||||++|+|++ |..||.+.+..+.+..+
T Consensus       176 ~~~~~~aPE~~~~~~~~~~~Di~S~Gvil~emlt~G~~Pf~~~~~~~~~~~i  227 (273)
T d1u46a_         176 VPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKI  227 (273)
T ss_dssp             CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHH
T ss_pred             cCcccCCHHHHhCCCCCcchhhhhhHHHHHHHHhCCCCCCCCcCHHHHHHHH
Confidence            6788999999999999999999999999999998 89999987776655443

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.97  E-value=1.3e-31  Score=217.46  Aligned_cols=96  Identities=21%  Similarity=0.306  Sum_probs=76.3

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCC-----CCcccc
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD-----QNYIVS   75 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~-----~~~~~~   75 (252)
                      ||+|||+++||||||||+|||++.                           +..+||+|||+++.....     .....|
T Consensus       152 gl~ylH~~~ivHrDlKp~NILld~---------------------------~~~~Kl~DFGls~~~~~~~~~~~~~~~~~  204 (301)
T d1lufa_         152 GMAYLSERKFVHRDLATRNCLVGE---------------------------NMVVKIADFGLSRNIYSADYYKADGNDAI  204 (301)
T ss_dssp             HHHHHHHTTCCCSCCSGGGEEECG---------------------------GGCEEECCCSCHHHHTGGGCBC----CCB
T ss_pred             HhhhcccCCeEeeEEcccceEECC---------------------------CCcEEEccchhheeccCCccccccCCCCc
Confidence            689999999999999999999944                           445778888877533221     122467


Q ss_pred             CCCcccchhhhcCCCCccchhHhHHHHHHHHHhCC-CCCCCCChHHHHH
Q 025467           76 TRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGE-ALFQTHENLEHLA  123 (252)
Q Consensus        76 t~~y~aPE~l~~~~~~~~~Diws~G~~l~~l~~g~-~pf~~~~~~~~~~  123 (252)
                      ++.|+|||.+.+..|+.++|||||||++|+|++|. +||.+.+..+...
T Consensus       205 ~~~y~aPE~~~~~~~t~ksDVwS~Gvvl~ell~~~~~p~~~~~~~e~~~  253 (301)
T d1lufa_         205 PIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYGMAHEEVIY  253 (301)
T ss_dssp             CGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHH
T ss_pred             CcCcCCHHHHccCCCChhhhhccchhhHHHHHccCCCCCCCCCHHHHHH
Confidence            88999999999999999999999999999999985 6787766655443

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=4.7e-31  Score=213.82  Aligned_cols=94  Identities=26%  Similarity=0.340  Sum_probs=75.4

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCC-----CCcccc
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD-----QNYIVS   75 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~-----~~~~~~   75 (252)
                      ||+|||+++||||||||+|||++.                           ++.+||+|||.+......     .....+
T Consensus       147 al~ylH~~~ivHrDiKp~NiLl~~---------------------------~~~~kl~dfg~~~~~~~~~~~~~~~~~~~  199 (299)
T d1fgka_         147 GMEYLASKKCIHRDLAARNVLVTE---------------------------DNVMKIADFGLARDIHHIDYYKKTTNGRL  199 (299)
T ss_dssp             HHHHHHHTTCCCSCCSGGGEEECT---------------------------TCCEEECSTTCCCCGGGCCTTCCCTTSCC
T ss_pred             HHHHhhhCCEEeeeecccceeecC---------------------------CCCeEeccchhhccccccccccccccCCC
Confidence            689999999999999999999954                           445677777776543221     122467


Q ss_pred             CCCcccchhhhcCCCCccchhHhHHHHHHHHHh-CCCCCCCCChHHH
Q 025467           76 TRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHENLEH  121 (252)
Q Consensus        76 t~~y~aPE~l~~~~~~~~~Diws~G~~l~~l~~-g~~pf~~~~~~~~  121 (252)
                      |+.|+|||.+.+..|+.++|||||||++|+|++ |.+||.+.+....
T Consensus       200 ~~~y~aPE~l~~~~y~~k~DiwS~Gvvl~ell~~g~~p~~~~~~~~~  246 (299)
T d1fgka_         200 PVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEEL  246 (299)
T ss_dssp             GGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHH
T ss_pred             ChhhhhhhHhcCCCCCchhhhHHhHHHHHHhccCCCCCCCCCCHHHH
Confidence            889999999999999999999999999999998 7888876665433

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=2.6e-31  Score=211.13  Aligned_cols=94  Identities=24%  Similarity=0.380  Sum_probs=71.8

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCCCccccCCCcc
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYR   80 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~~~~~~t~~y~   80 (252)
                      ||+|||+.+|+||||||+|||++                           .++.++++|||.++..........+|..|+
T Consensus       115 al~ylH~~~ivH~dlkp~Nil~~---------------------------~~~~~kl~dfg~s~~~~~~~~~~~~~~~y~  167 (262)
T d1byga_         115 AMEYLEGNNFVHRDLAARNVLVS---------------------------EDNVAKVSDFGLTKEASSTQDTGKLPVKWT  167 (262)
T ss_dssp             HHHHHHHTTCCCSCCSGGGEEEC---------------------------TTSCEEECCCCC------------CCTTTS
T ss_pred             hccccccCceeccccchHhheec---------------------------CCCCEeecccccceecCCCCccccccccCC
Confidence            68999999999999999999994                           455678888888876555555557888999


Q ss_pred             cchhhhcCCCCccchhHhHHHHHHHHHh-CCCCCCCCChHHH
Q 025467           81 APEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHENLEH  121 (252)
Q Consensus        81 aPE~l~~~~~~~~~Diws~G~~l~~l~~-g~~pf~~~~~~~~  121 (252)
                      |||++.+..++.++|||||||++|+|++ |.+||...+..+.
T Consensus       168 aPE~l~~~~~t~~sDIwSfG~il~el~t~~~~p~~~~~~~~~  209 (262)
T d1byga_         168 APEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDV  209 (262)
T ss_dssp             CHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCGGGH
T ss_pred             ChHHHhCCCCChHHHHHhHHHHHHHHHHCCCCCCCCCCHHHH
Confidence            9999999999999999999999999998 7888876554443

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.96  E-value=6.4e-31  Score=213.15  Aligned_cols=96  Identities=25%  Similarity=0.379  Sum_probs=76.5

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCC----------C
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD----------Q   70 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~----------~   70 (252)
                      ||+|||++||+||||||+|||+...+                        ....++++|||+|+.....          .
T Consensus       115 ~l~~lH~~~iiHrDiKp~NIl~~~~~------------------------~~~~vkl~DFG~a~~~~~~~~~~~~~~~~~  170 (299)
T d1ckia_         115 RIEYIHSKNFIHRDVKPDNFLMGLGK------------------------KGNLVYIIDFGLAKKYRDARTHQHIPYREN  170 (299)
T ss_dssp             HHHHHHHTTEECSCCCGGGEEECCGG------------------------GTTCEEECCCSSCEECBCTTTCCBCCCCBC
T ss_pred             HHHHHHHCCeeeccCCHhhccccccC------------------------CCceeeeeccCcceeccccccccceecccc
Confidence            68999999999999999999985432                        2345778888877643221          1


Q ss_pred             CccccCCCcccchhhhcCCCCccchhHhHHHHHHHHHhCCCCCCCCChHH
Q 025467           71 NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLE  120 (252)
Q Consensus        71 ~~~~~t~~y~aPE~l~~~~~~~~~Diws~G~~l~~l~~g~~pf~~~~~~~  120 (252)
                      ....||+.|+|||++.+..++.++||||+||++|+|++|..||.......
T Consensus       171 ~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~~l~el~tg~~P~~~~~~~~  220 (299)
T d1ckia_         171 KNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAAT  220 (299)
T ss_dssp             CSCCCCSSSCCHHHHTTBCCCHHHHHHHHHHHHHHHHHSSCTTCCCC---
T ss_pred             CCcCCCccccCHHHHhCCCCCChhhEEecCHHHHHHHhCCCcccccchHH
Confidence            23479999999999999899999999999999999999999998765443

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=1e-30  Score=212.89  Aligned_cols=138  Identities=23%  Similarity=0.341  Sum_probs=102.3

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCC-----Ccccc
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ-----NYIVS   75 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~-----~~~~~   75 (252)
                      ||+|||++|||||||||+||+++.++.                           ++++|||.++......     ....|
T Consensus       157 gl~~LH~~~ivHrDLKp~NIl~~~~~~---------------------------~ki~DfG~~~~~~~~~~~~~~~~~~g  209 (311)
T d1t46a_         157 GMAFLASKNCIHRDLAARNILLTHGRI---------------------------TKICDFGLARDIKNDSNYVVKGNARL  209 (311)
T ss_dssp             HHHHHHHTTCCCSCCSGGGEEEETTTE---------------------------EEECCCGGGSCTTSCTTSEECSSSEE
T ss_pred             HHHHHHhCCeeecccccccccccccCc---------------------------ccccccchheeccCCCcceEeeeccc
Confidence            689999999999999999999965554                           4555555554332221     12467


Q ss_pred             CCCcccchhhhcCCCCccchhHhHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhHHHHHHhhcCCCC
Q 025467           76 TRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLD  154 (252)
Q Consensus        76 t~~y~aPE~l~~~~~~~~~Diws~G~~l~~l~~-g~~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~  154 (252)
                      |+.|+|||++....++.++|||||||++|+|++ |.+||.+......+..+....-.                     ..
T Consensus       210 t~~y~aPE~~~~~~~~~~~DIwS~G~~l~ellt~g~p~~~~~~~~~~~~~~i~~~~~---------------------~~  268 (311)
T d1t46a_         210 PVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFR---------------------ML  268 (311)
T ss_dssp             CGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCSSHHHHHHHHHTCC---------------------CC
T ss_pred             ChHHcCHHHhcCCCCCCcccccchHHHHHHHHhCCCCCCCCCCHHHHHHHHHhcCCC---------------------CC
Confidence            899999999999999999999999999999998 66777665554444433221100                     00


Q ss_pred             CCccccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCCCC
Q 025467          155 WPEGAASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRL  234 (252)
Q Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~  234 (252)
                                                                             .....++.+.+||.+||+.||++||
T Consensus       269 -------------------------------------------------------~~~~~~~~l~~Li~~cl~~dP~~RP  293 (311)
T d1t46a_         269 -------------------------------------------------------SPEHAPAEMYDIMKTCWDADPLKRP  293 (311)
T ss_dssp             -------------------------------------------------------CCTTSCHHHHHHHHHHTCSSGGGSC
T ss_pred             -------------------------------------------------------CcccccHHHHHHHHHHcCCChhHCc
Confidence                                                                   0122456899999999999999999


Q ss_pred             CHHHHHc
Q 025467          235 TAREALR  241 (252)
Q Consensus       235 ta~e~l~  241 (252)
                      ||+|+++
T Consensus       294 s~~~il~  300 (311)
T d1t46a_         294 TFKQIVQ  300 (311)
T ss_dssp             CHHHHHH
T ss_pred             CHHHHHH
Confidence            9999985

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=1.3e-30  Score=211.97  Aligned_cols=143  Identities=24%  Similarity=0.319  Sum_probs=109.9

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCC-----Ccccc
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ-----NYIVS   75 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~-----~~~~~   75 (252)
                      ||+|||+++|+||||||+|||++                           .+..+||+|||+++......     ....+
T Consensus       145 gl~~LH~~~ivHrDlk~~NiLld---------------------------~~~~~Kl~DFGla~~~~~~~~~~~~~~~~~  197 (308)
T d1p4oa_         145 GMAYLNANKFVHRDLAARNCMVA---------------------------EDFTVKIGDFGMTRDIYETDYYRKGGKGLL  197 (308)
T ss_dssp             HHHHHHHTTCBCSCCSGGGEEEC---------------------------TTCCEEECCTTCCCGGGGGGCEEGGGSSEE
T ss_pred             HHHHHhhCCeeeceEcCCceeec---------------------------CCceEEEeecccceeccCCcceeeccceec
Confidence            68999999999999999999994                           45567788888776432221     22367


Q ss_pred             CCCcccchhhhcCCCCccchhHhHHHHHHHHHhCC-CCCCCCChHHHHHHHHHHhCCCchHHHHHhhHHHHHHhhcCCCC
Q 025467           76 TRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGE-ALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLD  154 (252)
Q Consensus        76 t~~y~aPE~l~~~~~~~~~Diws~G~~l~~l~~g~-~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~  154 (252)
                      |+.|+|||.+.+..++.++|||||||++|+|++|. .||.+.+..+.+..+..  +.                    ...
T Consensus       198 t~~y~aPe~l~~~~~~~~~Dv~S~G~il~El~t~~~~p~~~~~~~~~~~~i~~--~~--------------------~~~  255 (308)
T d1p4oa_         198 PVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVME--GG--------------------LLD  255 (308)
T ss_dssp             CGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCHHHHHHHHHT--TC--------------------CCC
T ss_pred             ccccCCHHHHccCCCCcccccccHHHHHHHHHhCCCCCCCCCCHHHHHHHHHh--CC--------------------CCC
Confidence            89999999999999999999999999999999985 78877666554443321  10                    010


Q ss_pred             CCccccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCCCC
Q 025467          155 WPEGAASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRL  234 (252)
Q Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~  234 (252)
                      .                                                       ....++++.+||.+||+.||++||
T Consensus       256 ~-------------------------------------------------------p~~~~~~l~~li~~cl~~~P~~RP  280 (308)
T d1p4oa_         256 K-------------------------------------------------------PDNCPDMLFELMRMCWQYNPKMRP  280 (308)
T ss_dssp             C-------------------------------------------------------CTTCCHHHHHHHHHHTCSSGGGSC
T ss_pred             C-------------------------------------------------------cccchHHHHHHHHHHcCCChhHCc
Confidence            1                                                       122446899999999999999999


Q ss_pred             CHHHHHc------CCCCCC
Q 025467          235 TAREALR------HPFFTR  247 (252)
Q Consensus       235 ta~e~l~------hpwf~~  247 (252)
                      |++++++      +|+|+.
T Consensus       281 s~~~il~~L~~~~~~~~~~  299 (308)
T d1p4oa_         281 SFLEIISSIKEEMEPGFRE  299 (308)
T ss_dssp             CHHHHHHHHGGGSCTTHHH
T ss_pred             CHHHHHHHHHHhcCCCCcC
Confidence            9999998      788764

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=9e-31  Score=213.08  Aligned_cols=138  Identities=20%  Similarity=0.237  Sum_probs=103.1

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCC--CccccCCC
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ--NYIVSTRH   78 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~--~~~~~t~~   78 (252)
                      ||+|||+++|+||||||+|||++.                           ...+||+|||+++......  ....||..
T Consensus       139 gl~~lH~~~iiHrDlkp~NIL~~~---------------------------~~~~kl~DfG~a~~~~~~~~~~~~~gt~~  191 (309)
T d1fvra_         139 GMDYLSQKQFIHRDLAARNILVGE---------------------------NYVAKIADFGLSRGQEVYVKKTMGRLPVR  191 (309)
T ss_dssp             HHHHHHHTTEECSCCSGGGEEECG---------------------------GGCEEECCTTCEESSCEECCC----CCTT
T ss_pred             HHHhhhcCCccccccccceEEEcC---------------------------CCceEEccccccccccccccccceecCCc
Confidence            689999999999999999999954                           4456777777775433222  22467899


Q ss_pred             cccchhhhcCCCCccchhHhHHHHHHHHHhCC-CCCCCCChHHHHHHHHHHhCCCchHHHHHhhHHHHHHhhcCCCCCCc
Q 025467           79 YRAPEVILGLGWTYPCDIWSVGCILVELCTGE-ALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPE  157 (252)
Q Consensus        79 y~aPE~l~~~~~~~~~Diws~G~~l~~l~~g~-~pf~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~  157 (252)
                      |+|||.+.+..++.++|||||||++|+|++|. +||.+.+..+....+..  +                    .++.   
T Consensus       192 y~aPE~l~~~~~~~~sDvwSfGvil~ell~~~~~p~~~~~~~~~~~~i~~--~--------------------~~~~---  246 (309)
T d1fvra_         192 WMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQ--G--------------------YRLE---  246 (309)
T ss_dssp             TCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHGGG--T--------------------CCCC---
T ss_pred             ccchHHhccCCCCccceeehhHHHHHHHHhcCCCCCCCCCHHHHHHHHHh--c--------------------CCCC---
Confidence            99999999999999999999999999999965 67876655443332211  0                    0011   


Q ss_pred             cccchhhHHhhhccCCccCCcccCccccccccccccccchhhhhhhhhhhhhccccchhhHHHHHHHhccCCCCCCCCHH
Q 025467          158 GAASRESIKSVMKLPRLQVPFFYGSFVEFKGYCLAFRCTDCIASFCQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAR  237 (252)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~ta~  237 (252)
                                                                          .+...++++.+||.+||+.||++||||+
T Consensus       247 ----------------------------------------------------~~~~~~~~~~~li~~cl~~dP~~RPs~~  274 (309)
T d1fvra_         247 ----------------------------------------------------KPLNCDDEVYDLMRQCWREKPYERPSFA  274 (309)
T ss_dssp             ----------------------------------------------------CCTTBCHHHHHHHHHHTCSSGGGSCCHH
T ss_pred             ----------------------------------------------------CCccCCHHHHHHHHHHcCCChhHCcCHH
Confidence                                                                1123456899999999999999999999


Q ss_pred             HHHcC
Q 025467          238 EALRH  242 (252)
Q Consensus       238 e~l~h  242 (252)
                      |+++|
T Consensus       275 eil~~  279 (309)
T d1fvra_         275 QILVS  279 (309)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            99986

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=4e-30  Score=209.17  Aligned_cols=88  Identities=25%  Similarity=0.281  Sum_probs=70.1

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCC-------CCcc
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD-------QNYI   73 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~-------~~~~   73 (252)
                      ||.|||+.+|+||||||+|||++..+                           .+||+|||+++.....       ....
T Consensus       142 gL~~lH~~~iiHrDLK~~NILl~~~~---------------------------~~kL~DFG~~~~~~~~~~~~~~~~~~~  194 (311)
T d1r0pa_         142 GMKFLASKKFVHRDLAARNCMLDEKF---------------------------TVKVADFGLARDMYDKEFDSVHNKTGA  194 (311)
T ss_dssp             HHHHHHHTTCCCSCCSGGGEEECTTC---------------------------CEEECSSGGGCCTTTTTCCCTTCTTCS
T ss_pred             hhhhhcccCcccCCccHHhEeECCCC---------------------------CEEEecccchhhccccccccceecccc
Confidence            68999999999999999999995544                           4556666655432221       1123


Q ss_pred             ccCCCcccchhhhcCCCCccchhHhHHHHHHHHHhCCCCCCC
Q 025467           74 VSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQT  115 (252)
Q Consensus        74 ~~t~~y~aPE~l~~~~~~~~~Diws~G~~l~~l~~g~~pf~~  115 (252)
                      .||..|+|||.+....++.++|||||||++|++++|..||..
T Consensus       195 ~gt~~y~aPE~~~~~~~~~ksDI~SfGivl~El~t~~~p~~~  236 (311)
T d1r0pa_         195 KLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYP  236 (311)
T ss_dssp             SCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCC
T ss_pred             cccccccChHHHhcCCCCChhHhhhhHHHHHHHHHCCCCCCC
Confidence            678899999999999999999999999999999998777654

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

Probab=99.95  E-value=4.9e-29  Score=201.27  Aligned_cols=95  Identities=21%  Similarity=0.363  Sum_probs=77.5

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCC----------C
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD----------Q   70 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~----------~   70 (252)
                      ||+|||++||+||||||+|||++....                      .....++++|||+|+.....          .
T Consensus       113 ~l~~lH~~giiHrDiKp~Nili~~~~~----------------------~~~~~vkl~DFG~a~~~~~~~~~~~~~~~~~  170 (293)
T d1csna_         113 RVQSIHEKSLVYRDIKPDNFLIGRPNS----------------------KNANMIYVVDFGMVKFYRDPVTKQHIPYREK  170 (293)
T ss_dssp             HHHHHHTTTEECCCCCGGGEEECCSSS----------------------TTTTCEEECCCTTCEESBCTTTCCBCCCCCC
T ss_pred             HHHHHHHCCceeccCCccceeecCccc----------------------ccCCceEEcccceeEEcccCccccceeeccc
Confidence            589999999999999999999965321                      23456788888888643221          1


Q ss_pred             CccccCCCcccchhhhcCCCCccchhHhHHHHHHHHHhCCCCCCCCC
Q 025467           71 NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHE  117 (252)
Q Consensus        71 ~~~~~t~~y~aPE~l~~~~~~~~~Diws~G~~l~~l~~g~~pf~~~~  117 (252)
                      ...+||+.|+|||++.+..++.++||||+||++|+|++|..||.+..
T Consensus       171 ~~~~GT~~y~aPE~~~~~~~~~~~DiwSlG~~l~elltg~~Pf~~~~  217 (293)
T d1csna_         171 KNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLK  217 (293)
T ss_dssp             CCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCC
T ss_pred             CceEEchhhcCHHHhcCCCCChHHHHHHhhHHHHHHHhCCCcCCCcc
Confidence            22479999999999999899999999999999999999999997654

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.95  E-value=1.3e-28  Score=199.66  Aligned_cols=88  Identities=25%  Similarity=0.321  Sum_probs=66.0

Q ss_pred             Chhhhhc--------cCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCC---
Q 025467            1 MFAVMHD--------LCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD---   69 (252)
Q Consensus         1 aL~~lH~--------~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~---   69 (252)
                      ||+|||+        +|||||||||+|||++.                           ++.+||+|||++......   
T Consensus       112 gl~~lH~~~~~~~~~~~IvHrDlKp~NILl~~---------------------------~~~~Kl~DFGl~~~~~~~~~~  164 (303)
T d1vjya_         112 GLAHLHMEIVGTQGKPAIAHRDLKSKNILVKK---------------------------NGTCCIADLGLAVRHDSATDT  164 (303)
T ss_dssp             HHHHHHCCBCSTTCBCEEECSCCCGGGEEECT---------------------------TSCEEECCCTTCEEEETTTTE
T ss_pred             HHHHHHHhhhhhccCCCeeccccCccceEEcC---------------------------CCCeEEEecCccccccCCCcc
Confidence            4566664        69999999999999954                           445667777766533221   


Q ss_pred             ----CCccccCCCcccchhhhcCC------CCccchhHhHHHHHHHHHhCCCCCCC
Q 025467           70 ----QNYIVSTRHYRAPEVILGLG------WTYPCDIWSVGCILVELCTGEALFQT  115 (252)
Q Consensus        70 ----~~~~~~t~~y~aPE~l~~~~------~~~~~Diws~G~~l~~l~~g~~pf~~  115 (252)
                          .....||+.|+|||++.+..      ++.++|||||||++|+|++|..||..
T Consensus       165 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~k~Di~S~Gvvl~el~tg~~~~~~  220 (303)
T d1vjya_         165 IDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGI  220 (303)
T ss_dssp             ECC----CCSCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTB
T ss_pred             eeccccceecccCcCChhhccccccccCCCcCcchhhhhhHHHHHHHhhCCCCCCc
Confidence                12347899999999987642      56789999999999999999988754

>d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: RIO1-like kinases
domain: Rio2 serine protein kinase C-terminal domain
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=99.14  E-value=1e-12  Score=98.09  Aligned_cols=69  Identities=20%  Similarity=0.133  Sum_probs=45.9

Q ss_pred             ChhhhhccCccccCCCCCCeEeecCCccccCCCccCCCCCCCCccccCCCCCCceEEeecCCccccCCCCCccccCCCcc
Q 025467            1 MFAVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYR   80 (252)
Q Consensus         1 aL~~lH~~~ivHrdlk~~Nil~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~dfg~~~~~~~~~~~~~~t~~y~   80 (252)
                      ||+|||++||+||||||+|||++..                            .++++|||.|.........     .|.
T Consensus       115 ~l~~lH~~giiHrDiKP~NILv~~~----------------------------~~~liDFG~a~~~~~~~~~-----~~l  161 (191)
T d1zara2         115 EVAKFYHRGIVHGDLSQYNVLVSEE----------------------------GIWIIDFPQSVEVGEEGWR-----EIL  161 (191)
T ss_dssp             HHHHHHHTTEECSCCSTTSEEEETT----------------------------EEEECCCTTCEETTSTTHH-----HHH
T ss_pred             HHHHHhhCCEEEccCChhheeeeCC----------------------------CEEEEECCCcccCCCCCcH-----HHH
Confidence            5889999999999999999999532                            3688899988654322110     111


Q ss_pred             cch-----hhhcCCCCccchhHhHHHH
Q 025467           81 APE-----VILGLGWTYPCDIWSVGCI  102 (252)
Q Consensus        81 aPE-----~l~~~~~~~~~Diws~G~~  102 (252)
                      ...     ......|+..+|+||..--
T Consensus       162 ~rd~~~~~~~f~r~y~~~~d~~s~~~~  188 (191)
T d1zara2         162 ERDVRNIITYFSRTYRTEKDINSAIDR  188 (191)
T ss_dssp             HHHHHHHHHHHHHHHCCCCCHHHHHHH
T ss_pred             HHHHHHHHHHHcCCCCCcccHHHHHHH
Confidence            110     0112457888999997543

>d2ppqa1 d.144.1.6 (A:5-320) Homoserine kinase ThrB {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Homoserine kinase ThrB
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=92.00  E-value=0.02  Score=44.23  Aligned_cols=17  Identities=35%  Similarity=0.595  Sum_probs=15.1

Q ss_pred             cCccccCCCCCCeEeec
Q 025467            8 LCMIHTDLKPENVLLVS   24 (252)
Q Consensus         8 ~~ivHrdlk~~Nil~~~   24 (252)
                      .|+||+|+.+.||++..
T Consensus       183 ~giIHgDl~~dNvl~~~  199 (316)
T d2ppqa1         183 AGVIHADLFQDNVFFLG  199 (316)
T ss_dssp             EEEECSCCCGGGEEEET
T ss_pred             cccccCCcchhhhhccc
Confidence            57999999999999954

>d1j7la_ d.144.1.6 (A:) Type IIIa 3',5"-aminoglycoside phosphotransferase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Type IIIa 3',5"-aminoglycoside phosphotransferase
species: Enterococcus faecalis [TaxId: 1351]

Probab=88.06  E-value=0.11  Score=38.52  Aligned_cols=15  Identities=27%  Similarity=0.463  Sum_probs=13.6

Q ss_pred             CccccCCCCCCeEee
Q 025467            9 CMIHTDLKPENVLLV   23 (252)
Q Consensus         9 ~ivHrdlk~~Nil~~   23 (252)
                      .++|+|+.+.||++.
T Consensus       184 ~l~HgD~~~~Nil~~  198 (263)
T d1j7la_         184 VFSHGDLGDSNIFVK  198 (263)
T ss_dssp             EEECSCCCTTSEEEE
T ss_pred             EEEEeeccCcceeec
Confidence            489999999999994

>d1nd4a_ d.144.1.6 (A:) Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase) {Bacteria (Klebsiella pneumoniae) [TaxId: 573]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase)
species: Bacteria (Klebsiella pneumoniae) [TaxId: 573]

Probab=86.61  E-value=0.092  Score=38.67  Aligned_cols=16  Identities=19%  Similarity=0.299  Sum_probs=14.0

Q ss_pred             CccccCCCCCCeEeec
Q 025467            9 CMIHTDLKPENVLLVS   24 (252)
Q Consensus         9 ~ivHrdlk~~Nil~~~   24 (252)
                      .++|+|+.+.|||+..
T Consensus       176 ~liHgD~~~~Nvl~~~  191 (255)
T d1nd4a_         176 VVTHGDACLPNIMVEN  191 (255)
T ss_dssp             EEECSSCCGGGEEEET
T ss_pred             eEEeCCCCCcceEEeC
Confidence            4899999999999953

>d2pula1 d.144.1.6 (A:5-396) Methylthioribose kinase MtnK {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Methylthioribose kinase MtnK
species: Bacillus subtilis [TaxId: 1423]

Probab=85.27  E-value=0.19  Score=39.92  Aligned_cols=16  Identities=25%  Similarity=0.434  Sum_probs=14.1

Q ss_pred             cCccccCCCCCCeEee
Q 025467            8 LCMIHTDLKPENVLLV   23 (252)
Q Consensus         8 ~~ivHrdlk~~Nil~~   23 (252)
                      ..++|+|+.+.|||++
T Consensus       223 ~~LiHGDl~~gNIlv~  238 (392)
T d2pula1         223 ETLIHGDLHTGSIFAS  238 (392)
T ss_dssp             CEEECSCCCGGGEEEC
T ss_pred             cceeccCCcCCceeEc
Confidence            3589999999999994

>d1zyla1 d.144.1.6 (A:4-328) RdoA {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: RdoA
species: Escherichia coli [TaxId: 562]

Probab=82.09  E-value=0.25  Score=37.97  Aligned_cols=16  Identities=25%  Similarity=0.372  Sum_probs=14.1

Q ss_pred             cCccccCCCCCCeEee
Q 025467            8 LCMIHTDLKPENVLLV   23 (252)
Q Consensus         8 ~~ivHrdlk~~Nil~~   23 (252)
                      .++||+|+.+.|||+.
T Consensus       192 ~~liHgDlh~~NvL~~  207 (325)
T d1zyla1         192 VLRLHGDCHAGNILWR  207 (325)
T ss_dssp             CEECCSSCSGGGEEES
T ss_pred             ceeecCCCCcccEEEe
Confidence            4689999999999983