Citrus Sinensis ID: 025500
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
ID ![]() | Alignment graph ![]() | Length ![]() |
Definition ![]() |
RBH(Q2H) ![]() |
RBH(H2Q) ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 252 | 2.2.26 [Sep-21-2011] | |||||||
| C6TBN2 | 346 | Probable aldo-keto reduct | yes | no | 0.900 | 0.656 | 0.806 | 1e-109 | |
| Q3L181 | 337 | Perakine reductase OS=Rau | N/A | no | 0.900 | 0.673 | 0.754 | 1e-100 | |
| Q93ZN2 | 345 | Probable aldo-keto reduct | yes | no | 0.888 | 0.649 | 0.681 | 2e-83 | |
| O22707 | 345 | Probable aldo-keto reduct | no | no | 0.904 | 0.660 | 0.652 | 5e-83 | |
| F4HPY8 | 330 | Probable aldo-keto reduct | no | no | 0.869 | 0.663 | 0.666 | 1e-82 | |
| Q84M96 | 346 | Probable aldo-keto reduct | no | no | 0.908 | 0.661 | 0.643 | 5e-82 | |
| P40691 | 307 | Auxin-induced protein PCN | N/A | no | 0.920 | 0.755 | 0.641 | 7e-82 | |
| Q9ASZ9 | 345 | Probable aldo-keto reduct | no | no | 0.869 | 0.634 | 0.665 | 8e-80 | |
| A2XRZ0 | 351 | Probable aldo-keto reduct | N/A | no | 0.884 | 0.635 | 0.651 | 3e-79 | |
| Q7XT99 | 351 | Probable aldo-keto reduct | no | no | 0.888 | 0.638 | 0.646 | 4e-79 |
| >sp|C6TBN2|AKR1_SOYBN Probable aldo-keto reductase 1 OS=Glycine max GN=AKR1 PE=2 SV=1 | Back alignment and function desciption |
|---|
Score = 393 bits (1009), Expect = e-109, Method: Compositional matrix adjust.
Identities = 183/227 (80%), Positives = 207/227 (91%)
Query: 7 QVPRVKLGTQGLEVSKLGYGCMNLSGGYSSPVSEEDGISMIKHAFSKGITFFDTADVYGQ 66
Q+ VKLGTQG EVSKLG+GCM L+G Y+ P+ E+DGIS+IK+AFSKGITFFDTADVYG
Sbjct: 5 QIQPVKLGTQGFEVSKLGFGCMGLTGAYNDPLQEQDGISVIKYAFSKGITFFDTADVYGA 64
Query: 67 NANEVLLGKALKQLPREKIQVATKFGIAGIGVAGVIVKGAPDYVRSCCEASLKRLDVDYI 126
NANE+L+GKALKQLPREKIQ+ATKFGIA G + ++G+P+YVRSCCE LKRLDV+YI
Sbjct: 65 NANELLVGKALKQLPREKIQIATKFGIASRGFPDMKIEGSPEYVRSCCETGLKRLDVEYI 124
Query: 127 DLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPGTIRRAHAVHPITAVQMEWS 186
DLYYQHRVDTSVPIEET+GE+KKLVEEGK+KYIGLSEASP TIRRAHA+HPITAVQ+EWS
Sbjct: 125 DLYYQHRVDTSVPIEETVGELKKLVEEGKVKYIGLSEASPDTIRRAHAIHPITAVQIEWS 184
Query: 187 LWTRDIEEEIIPLCRELGIGIVPYSPLGRGFFGGKAVVENVPADSFL 233
LWTRDIEEEI+PLCRELGIGIVPYSPLGRGFFGGK VVENVP +S L
Sbjct: 185 LWTRDIEEEIVPLCRELGIGIVPYSPLGRGFFGGKGVVENVPTNSSL 231
|
May interfere with the nodulation process and inhibits nodule development. Glycine max (taxid: 3847) EC: 1EC: .EC: 1EC: .EC: 1EC: .EC: - |
| >sp|Q3L181|PERR_RAUSE Perakine reductase OS=Rauvolfia serpentina GN=PR PE=1 SV=1 | Back alignment and function description |
|---|
Score = 364 bits (934), Expect = e-100, Method: Compositional matrix adjust.
Identities = 172/228 (75%), Positives = 202/228 (88%), Gaps = 1/228 (0%)
Query: 8 VPRVKLGTQGLEVSKLGYGCMNLSGGYSSPVSEEDGISMIKHAFSKGITFFDTADVYGQN 67
+PRVKLGTQGLEVSKLG+GCM LSG Y+ + EE GI++IK AF+ GITFFDT+D+YG+N
Sbjct: 1 MPRVKLGTQGLEVSKLGFGCMGLSGDYNDALPEEQGIAVIKEAFNCGITFFDTSDIYGEN 60
Query: 68 -ANEVLLGKALKQLPREKIQVATKFGIAGIGVAGVIVKGAPDYVRSCCEASLKRLDVDYI 126
+NE LLGKALKQLPREKIQV TKFGI IG +GV KG PDYVRSCCEASLKRLDVDYI
Sbjct: 61 GSNEELLGKALKQLPREKIQVGTKFGIHEIGFSGVKAKGTPDYVRSCCEASLKRLDVDYI 120
Query: 127 DLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPGTIRRAHAVHPITAVQMEWS 186
DL+Y HR+DT+VPIE T+GE+KKLVEEGKIKY+GLSEASP TIRRAHAVHP+TA+Q+E+S
Sbjct: 121 DLFYIHRIDTTVPIEITMGELKKLVEEGKIKYVGLSEASPDTIRRAHAVHPVTALQIEYS 180
Query: 187 LWTRDIEEEIIPLCRELGIGIVPYSPLGRGFFGGKAVVENVPADSFLV 234
LWTRDIE+EI+PLCR+LGIGIVPYSP+GRG F GKA+ E++P +S L
Sbjct: 181 LWTRDIEDEIVPLCRQLGIGIVPYSPIGRGLFAGKAIKESLPENSVLT 228
|
Aldo-keto reductase involved in the biosynthesis of monoterpenoid indole alkaloids. Broad substrate specificity enzyme with a high selectivity in the group of alkaloids. Can use perakine, 19(S),20(R)-dihydro-peraksine-17,21-al, cinnamic aldehyde, p-coumaric aldehyde and 3-(3,4,5-trimethoxyphenyl)propanal as substrates, but not ketosteroids such as progesterone. NADPH could not be replaced by NADH. Rauvolfia serpentina (taxid: 4060) EC: 1 EC: . EC: 1 EC: . EC: 1 EC: . EC: 3 EC: 1 EC: 7 |
| >sp|Q93ZN2|ALKR4_ARATH Probable aldo-keto reductase 4 OS=Arabidopsis thaliana GN=At1g60710 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 309 bits (791), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 154/226 (68%), Positives = 177/226 (78%), Gaps = 2/226 (0%)
Query: 8 VPRVKLGTQGLEVSKLGYGCMNLSGGYSSPVSEEDGISMIKHAFSKGITFFDTADVYGQN 67
V R+KLG+QGLEVS G GCM LS Y +P E + I++I HA G+T DT+D+YG
Sbjct: 7 VRRMKLGSQGLEVSAQGLGCMGLSAFYGAPKPENEAIALIHHAIHSGVTLLDTSDIYGPE 66
Query: 68 ANEVLLGKALKQLPREKIQVATKFGIAGIGVAGVIVKGAPDYVRSCCEASLKRLDVDYID 127
NEVLLGKALK REK+++ATKFGI+ V+G P+YVR+ CEASLKRLD+ ID
Sbjct: 67 TNEVLLGKALKDGVREKVELATKFGIS-YAEGKREVRGDPEYVRAACEASLKRLDIACID 125
Query: 128 LYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPGTIRRAHAVHPITAVQMEWSL 187
LYYQHRVDT VPIE T+GE+KKLVEEGKIKYIGLSEAS TIRRAHAVHPITAVQ+EWSL
Sbjct: 126 LYYQHRVDTRVPIEITMGELKKLVEEGKIKYIGLSEASASTIRRAHAVHPITAVQIEWSL 185
Query: 188 WTRDIEEEIIPLCRELGIGIVPYSPLGRGFFG-GKAVVENVPADSF 232
WTRD+EEEIIP CRELGIGIV YSPLGRGFF G +VEN+ D F
Sbjct: 186 WTRDVEEEIIPTCRELGIGIVAYSPLGRGFFASGPKLVENLEKDDF 231
|
Arabidopsis thaliana (taxid: 3702) EC: 1 EC: . EC: 1 EC: . EC: 1 EC: . EC: - |
| >sp|O22707|ALKR3_ARATH Probable aldo-keto reductase 3 OS=Arabidopsis thaliana GN=At1g60690 PE=3 SV=1 | Back alignment and function description |
|---|
Score = 307 bits (786), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 150/230 (65%), Positives = 178/230 (77%), Gaps = 2/230 (0%)
Query: 4 EKHQVPRVKLGTQGLEVSKLGYGCMNLSGGYSSPVSEEDGISMIKHAFSKGITFFDTADV 63
E +V R+KLG+QGLEVS G GCM L+G Y + E + I++I HA G+TF DT+D+
Sbjct: 3 ESCRVRRIKLGSQGLEVSAQGLGCMGLTGHYGASKPETEAIALIHHAIHSGVTFLDTSDM 62
Query: 64 YGQNANEVLLGKALKQLPREKIQVATKFGIAGIGVAGVIVKGAPDYVRSCCEASLKRLDV 123
YG NE+LLGKALK REK+++ATKFGI+ +KG P YVR+ CEASLKRLDV
Sbjct: 63 YGPETNEILLGKALKDGVREKVELATKFGIS-YAEGNREIKGDPAYVRAACEASLKRLDV 121
Query: 124 DYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPGTIRRAHAVHPITAVQM 183
IDLYYQHR+DT VPIE T+GE+KKL+EEGKIKYIGLSEAS TIRRAH VHPITAVQ+
Sbjct: 122 TCIDLYYQHRIDTRVPIEITMGELKKLIEEGKIKYIGLSEASASTIRRAHTVHPITAVQL 181
Query: 184 EWSLWTRDIEEEIIPLCRELGIGIVPYSPLGRGFFG-GKAVVENVPADSF 232
EWSLWTRD+EEEI+P CRELGIGIV YSPLGRGFF G +VEN+ + F
Sbjct: 182 EWSLWTRDVEEEIVPTCRELGIGIVSYSPLGRGFFASGPKLVENLDNNDF 231
|
Arabidopsis thaliana (taxid: 3702) EC: 1 EC: . EC: 1 EC: . EC: 1 EC: . EC: - |
| >sp|F4HPY8|AKR6_ARATH Probable aldo-keto reductase 6 OS=Arabidopsis thaliana GN=At1g60750 PE=3 SV=1 | Back alignment and function description |
|---|
Score = 306 bits (783), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 146/219 (66%), Positives = 174/219 (79%)
Query: 1 MAEEKHQVPRVKLGTQGLEVSKLGYGCMNLSGGYSSPVSEEDGISMIKHAFSKGITFFDT 60
MAEE QV R+KLG+QGLEVS G GCM LS Y +P E + +++++HA + G+TF DT
Sbjct: 1 MAEEACQVRRMKLGSQGLEVSAQGLGCMGLSDFYGAPTPETNAVALLRHAINAGVTFLDT 60
Query: 61 ADVYGQNANEVLLGKALKQLPREKIQVATKFGIAGIGVAGVIVKGAPDYVRSCCEASLKR 120
+D+YG NE+LLGKALK R+K+++ATKFGI +G P+YVR CEASLKR
Sbjct: 61 SDIYGPETNELLLGKALKDGLRDKVELATKFGITASEDGKFGFRGDPEYVRIACEASLKR 120
Query: 121 LDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPGTIRRAHAVHPITA 180
L V IDLYYQHR+DT++PIE TIGE+KKLVEEGKIKYIGLSEAS TIRRAHAVHPITA
Sbjct: 121 LGVTCIDLYYQHRIDTTLPIEITIGELKKLVEEGKIKYIGLSEASASTIRRAHAVHPITA 180
Query: 181 VQMEWSLWTRDIEEEIIPLCRELGIGIVPYSPLGRGFFG 219
VQ+EWSLW+RD+EE+IIP CRELGIGIV YSPLGRGF G
Sbjct: 181 VQIEWSLWSRDVEEDIIPTCRELGIGIVAYSPLGRGFLG 219
|
Arabidopsis thaliana (taxid: 3702) EC: 1 EC: . EC: 1 EC: . EC: 1 EC: . EC: - |
| >sp|Q84M96|ALKR2_ARATH Probable aldo-keto reductase 2 OS=Arabidopsis thaliana GN=AGD2 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 304 bits (778), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 148/230 (64%), Positives = 178/230 (77%), Gaps = 1/230 (0%)
Query: 4 EKHQVPRVKLGTQGLEVSKLGYGCMNLSGGYSSPVSEEDGISMIKHAFSKGITFFDTADV 63
E +V R+KLG+QGLEVS G GCM LS Y +P E D I+++ HA + G+TFFDT+D+
Sbjct: 3 EACRVRRMKLGSQGLEVSAQGLGCMALSARYGAPKPETDAIALLHHAINSGVTFFDTSDM 62
Query: 64 YGQNANEVLLGKALKQLPREKIQVATKFGIAGIGVAGVIVKGAPDYVRSCCEASLKRLDV 123
YG NE+LLGKALK +EK+++ATKFG + V+G P+YVR+ CEASLKRLD+
Sbjct: 63 YGPETNELLLGKALKDGVKEKVELATKFGFFIVEGEISEVRGDPEYVRAACEASLKRLDI 122
Query: 124 DYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPGTIRRAHAVHPITAVQM 183
IDLYYQHR+DT VPIE T+ E+KKLVEEGKIKYIGLSEAS TIRRAHAVHPITAVQ+
Sbjct: 123 ACIDLYYQHRIDTRVPIEITMRELKKLVEEGKIKYIGLSEASASTIRRAHAVHPITAVQI 182
Query: 184 EWSLWTRDIEEEIIPLCRELGIGIVPYSPLGRGFF-GGKAVVENVPADSF 232
EWSLW+RD EE+IIP+CRELGIGIV YSPLGRGF G + EN+ D F
Sbjct: 183 EWSLWSRDAEEDIIPICRELGIGIVAYSPLGRGFLAAGPKLAENLENDDF 232
|
Arabidopsis thaliana (taxid: 3702) EC: 1 EC: . EC: 1 EC: . EC: 1 EC: . EC: - |
| >sp|P40691|A115_TOBAC Auxin-induced protein PCNT115 OS=Nicotiana tabacum PE=2 SV=1 | Back alignment and function description |
|---|
Score = 303 bits (776), Expect = 7e-82, Method: Compositional matrix adjust.
Identities = 152/237 (64%), Positives = 179/237 (75%), Gaps = 5/237 (2%)
Query: 1 MAEEKHQVPRVKLGTQGLEVSKLGYGCMNLSGGYSSPVSEEDGISMIKHAFSKGITFFDT 60
MA+E +VPR+KLG+QGLEVS G GCM +S Y P E D I +I HA + GIT DT
Sbjct: 1 MAKEGTKVPRIKLGSQGLEVSAQGLGCMGMSAFYGPPKPEPDMIQLIHHAINSGITLLDT 60
Query: 61 ADVYGQNANEVLLGKALKQLPREKIQVATKFGIA----GIGVAGVIVKGAPDYVRSCCEA 116
+DVYG + NE+LLGKALK RE++ +ATKFGI V G P YVR+ CEA
Sbjct: 61 SDVYGPHTNEILLGKALKGGTRERVVLATKFGIVLGDEKKAEGKRAVHGDPAYVRAACEA 120
Query: 117 SLKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPGTIRRAHAVH 176
SLKRLD+D IDLYYQHRVDT VPIE T+GE+KKLVEEGK+KYIGLSEAS TIRRAHAVH
Sbjct: 121 SLKRLDIDCIDLYYQHRVDTRVPIEITVGELKKLVEEGKLKYIGLSEASASTIRRAHAVH 180
Query: 177 PITAVQMEWSLWTRDIEEEIIPLCRELGIGIVPYSPLGRGFF-GGKAVVENVPADSF 232
PITAVQ+EWSLW+RD+EEEIIP CRELGIGIV YSPLGRGF G ++E++ + +
Sbjct: 181 PITAVQLEWSLWSRDVEEEIIPTCRELGIGIVAYSPLGRGFLSSGPKLLEDMSNEDY 237
|
Nicotiana tabacum (taxid: 4097) |
| >sp|Q9ASZ9|ALKR5_ARATH Probable aldo-keto reductase 5 OS=Arabidopsis thaliana GN=At1g60730 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 296 bits (759), Expect = 8e-80, Method: Compositional matrix adjust.
Identities = 147/221 (66%), Positives = 172/221 (77%), Gaps = 2/221 (0%)
Query: 8 VPRVKLGTQGLEVSKLGYGCMNLSGGYSSPVSEEDGISMIKHAFSKGITFFDTADVYGQN 67
V R+KLG+QGLEVS G GCM LS Y +P E + I++I HA G+TF DT+D+YG
Sbjct: 7 VRRIKLGSQGLEVSAQGLGCMGLSAFYGTPKPETEAIALIHHAIHSGVTFLDTSDIYGPE 66
Query: 68 ANEVLLGKALKQLPREKIQVATKFGIAGIGVAGVIVKGAPDYVRSCCEASLKRLDVDYID 127
NE+LL KALK REK+++ATK+GI V KG P YVR+ CEASL R+DV ID
Sbjct: 67 TNELLLSKALKDGVREKVELATKYGIR-YAEGKVEFKGDPAYVRAACEASLMRVDVACID 125
Query: 128 LYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPGTIRRAHAVHPITAVQMEWSL 187
LYYQHR+DT VPIE TIGE+KKLVEEGKIKYIGLSEAS TIRRAHAVHPITA+Q+EWSL
Sbjct: 126 LYYQHRIDTRVPIEITIGELKKLVEEGKIKYIGLSEASASTIRRAHAVHPITALQIEWSL 185
Query: 188 WTRDIEEEIIPLCRELGIGIVPYSPLGRGFFG-GKAVVENV 227
W+RD+EE+IIP CRELGIGIV YSPLGRGFF G +VEN+
Sbjct: 186 WSRDVEEDIIPTCRELGIGIVAYSPLGRGFFASGPKLVENL 226
|
Arabidopsis thaliana (taxid: 3702) EC: 1 EC: . EC: 1 EC: . EC: 1 EC: . EC: - |
| >sp|A2XRZ0|AKR2_ORYSI Probable aldo-keto reductase 2 OS=Oryza sativa subsp. indica GN=OsI_15387 PE=3 SV=1 | Back alignment and function description |
|---|
Score = 295 bits (754), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 148/227 (65%), Positives = 176/227 (77%), Gaps = 4/227 (1%)
Query: 8 VPRVKLGTQGLEVSKLGYGCMNLSGGYSSPVSEEDGISMIKHAFSKGITFFDTADVYGQN 67
V R+KLG+QGLEVS G GCM +S Y P E D +++I HA + G+T DT+D+YG +
Sbjct: 11 VRRMKLGSQGLEVSAQGLGCMGMSAFYGPPKPEPDMVALIHHAVAAGVTLLDTSDIYGPH 70
Query: 68 ANEVLLGKALKQLPREKIQVATKFGIA-GIGVAGVIVKGAPDYVRSCCEASLKRLDVDYI 126
NE+LLGKAL+ R+K+++ATKFGIA G GV +G P YVR+ CE SL+RL VD I
Sbjct: 71 TNELLLGKALQGGVRDKVELATKFGIAFEDGKRGV--RGDPAYVRAACEGSLRRLGVDSI 128
Query: 127 DLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPGTIRRAHAVHPITAVQMEWS 186
DLYYQHRVD VPIE TIGE+KKLVEEGKIKYIGLSEAS TIRRAHAVHPITAVQ+EWS
Sbjct: 129 DLYYQHRVDKKVPIEVTIGELKKLVEEGKIKYIGLSEASASTIRRAHAVHPITAVQLEWS 188
Query: 187 LWTRDIEEEIIPLCRELGIGIVPYSPLGRGFF-GGKAVVENVPADSF 232
LW+RD+EE+IIP CRELGIGIV YSPLGRGFF G +VE++ F
Sbjct: 189 LWSRDVEEDIIPTCRELGIGIVAYSPLGRGFFSAGAKLVESLSDQDF 235
|
Oryza sativa subsp. indica (taxid: 39946) EC: 1 EC: . EC: 1 EC: . EC: 1 EC: . EC: - |
| >sp|Q7XT99|AKR2_ORYSJ Probable aldo-keto reductase 2 OS=Oryza sativa subsp. japonica GN=Os04g0338000 PE=2 SV=2 | Back alignment and function description |
|---|
Score = 294 bits (752), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 146/226 (64%), Positives = 174/226 (76%), Gaps = 2/226 (0%)
Query: 8 VPRVKLGTQGLEVSKLGYGCMNLSGGYSSPVSEEDGISMIKHAFSKGITFFDTADVYGQN 67
V R+KLG+QGLEVS G GCM +S Y P E D +++I HA + G+T DT+D+YG +
Sbjct: 11 VRRMKLGSQGLEVSAQGLGCMGMSAFYGPPKPEPDMVALIHHAVAAGVTLLDTSDIYGPH 70
Query: 68 ANEVLLGKALKQLPREKIQVATKFGIAGIGVAGVIVKGAPDYVRSCCEASLKRLDVDYID 127
NE+LLGKAL+ R+K+++ATKFGIA V+G P YVR+ CE SL+RL VD ID
Sbjct: 71 TNELLLGKALQGGVRDKVELATKFGIA-FEDGKRDVRGDPAYVRAACEGSLRRLGVDSID 129
Query: 128 LYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPGTIRRAHAVHPITAVQMEWSL 187
LYYQHRVD VPIE TIGE+KKLVEEGKIKYIGLSEAS TIRRAHAVHPITAVQ+EWSL
Sbjct: 130 LYYQHRVDKKVPIEVTIGELKKLVEEGKIKYIGLSEASASTIRRAHAVHPITAVQLEWSL 189
Query: 188 WTRDIEEEIIPLCRELGIGIVPYSPLGRGFF-GGKAVVENVPADSF 232
W+RD+EE+IIP CRELGIGIV YSPLGRGFF G +VE++ F
Sbjct: 190 WSRDVEEDIIPTCRELGIGIVAYSPLGRGFFSAGAKLVESLSDQDF 235
|
Oryza sativa subsp. japonica (taxid: 39947) EC: 1 EC: . EC: 1 EC: . EC: 1 EC: . EC: - |
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 252 | ||||||
| 378548275 | 346 | RecName: Full=Probable aldo-keto reducta | 0.900 | 0.656 | 0.806 | 1e-107 | |
| 225451318 | 343 | PREDICTED: auxin-induced protein PCNT115 | 0.900 | 0.661 | 0.824 | 1e-107 | |
| 356571605 | 345 | PREDICTED: LOW QUALITY PROTEIN: auxin-in | 0.904 | 0.660 | 0.802 | 1e-107 | |
| 255542314 | 343 | aldo/keto reductase, putative [Ricinus c | 0.928 | 0.682 | 0.769 | 1e-106 | |
| 110289083 | 249 | Auxin-induced protein PCNT115, putative, | 0.944 | 0.955 | 0.743 | 1e-105 | |
| 225451312 | 342 | PREDICTED: auxin-induced protein PCNT115 | 0.908 | 0.669 | 0.808 | 1e-105 | |
| 356505965 | 351 | PREDICTED: auxin-induced protein PCNT115 | 0.932 | 0.669 | 0.784 | 1e-105 | |
| 359487894 | 362 | PREDICTED: auxin-induced protein PCNT115 | 0.900 | 0.627 | 0.815 | 1e-105 | |
| 298204875 | 342 | unnamed protein product [Vitis vinifera] | 0.900 | 0.663 | 0.815 | 1e-105 | |
| 356573095 | 346 | PREDICTED: LOW QUALITY PROTEIN: auxin-in | 0.904 | 0.658 | 0.799 | 1e-105 |
| >gi|378548275|sp|C6TBN2.1|AKR1_SOYBN RecName: Full=Probable aldo-keto reductase 1; Short=GmAKR1 gi|255637828|gb|ACU19234.1| unknown [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 393 bits (1009), Expect = e-107, Method: Compositional matrix adjust.
Identities = 183/227 (80%), Positives = 207/227 (91%)
Query: 7 QVPRVKLGTQGLEVSKLGYGCMNLSGGYSSPVSEEDGISMIKHAFSKGITFFDTADVYGQ 66
Q+ VKLGTQG EVSKLG+GCM L+G Y+ P+ E+DGIS+IK+AFSKGITFFDTADVYG
Sbjct: 5 QIQPVKLGTQGFEVSKLGFGCMGLTGAYNDPLQEQDGISVIKYAFSKGITFFDTADVYGA 64
Query: 67 NANEVLLGKALKQLPREKIQVATKFGIAGIGVAGVIVKGAPDYVRSCCEASLKRLDVDYI 126
NANE+L+GKALKQLPREKIQ+ATKFGIA G + ++G+P+YVRSCCE LKRLDV+YI
Sbjct: 65 NANELLVGKALKQLPREKIQIATKFGIASRGFPDMKIEGSPEYVRSCCETGLKRLDVEYI 124
Query: 127 DLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPGTIRRAHAVHPITAVQMEWS 186
DLYYQHRVDTSVPIEET+GE+KKLVEEGK+KYIGLSEASP TIRRAHA+HPITAVQ+EWS
Sbjct: 125 DLYYQHRVDTSVPIEETVGELKKLVEEGKVKYIGLSEASPDTIRRAHAIHPITAVQIEWS 184
Query: 187 LWTRDIEEEIIPLCRELGIGIVPYSPLGRGFFGGKAVVENVPADSFL 233
LWTRDIEEEI+PLCRELGIGIVPYSPLGRGFFGGK VVENVP +S L
Sbjct: 185 LWTRDIEEEIVPLCRELGIGIVPYSPLGRGFFGGKGVVENVPTNSSL 231
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225451318|ref|XP_002273776.1| PREDICTED: auxin-induced protein PCNT115 [Vitis vinifera] gi|298204867|emb|CBI34174.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 392 bits (1008), Expect = e-107, Method: Compositional matrix adjust.
Identities = 188/228 (82%), Positives = 211/228 (92%), Gaps = 1/228 (0%)
Query: 7 QVPRVKLGTQGLEVSKLGYGCMNLSGGYSSPVSEEDGISMIKHAFSKGITFFDTADVYGQ 66
Q+PRVKLG QGLEVSKLG+GCM L+G Y+ PVSE+ GIS+IK+AFSKGITFFDT+DVYG
Sbjct: 5 QIPRVKLGNQGLEVSKLGFGCMGLTGEYNHPVSEDVGISIIKYAFSKGITFFDTSDVYGA 64
Query: 67 NANEVLLGKALKQLPREKIQVATKFGIA-GIGVAGVIVKGAPDYVRSCCEASLKRLDVDY 125
NANE+L+GKALK+LPREKIQ+ATKFG+A G AG+IVKG P+YVRS C ASLKR+DV+Y
Sbjct: 65 NANEILVGKALKELPREKIQLATKFGVAPGDYTAGIIVKGTPEYVRSSCVASLKRIDVEY 124
Query: 126 IDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPGTIRRAHAVHPITAVQMEW 185
IDLYYQHRVD SVPIEET+GE+KKLVEEGKIKYIGLSEASP TIRRAHAVHPITA+QMEW
Sbjct: 125 IDLYYQHRVDRSVPIEETMGELKKLVEEGKIKYIGLSEASPDTIRRAHAVHPITALQMEW 184
Query: 186 SLWTRDIEEEIIPLCRELGIGIVPYSPLGRGFFGGKAVVENVPADSFL 233
SLWTR+IEEEI+PLCRELGIGIVPYSPLGRGFFGGKAV ENVPA+S L
Sbjct: 185 SLWTREIEEEIVPLCRELGIGIVPYSPLGRGFFGGKAVSENVPANSLL 232
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356571605|ref|XP_003553967.1| PREDICTED: LOW QUALITY PROTEIN: auxin-induced protein PCNT115-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 392 bits (1006), Expect = e-107, Method: Compositional matrix adjust.
Identities = 183/228 (80%), Positives = 208/228 (91%)
Query: 7 QVPRVKLGTQGLEVSKLGYGCMNLSGGYSSPVSEEDGISMIKHAFSKGITFFDTADVYGQ 66
Q+PRVKLGTQGLEVSKLGYGCM L+G Y+ P+ EE+GIS+IKHAFSKGITFFDT+D+YG
Sbjct: 6 QMPRVKLGTQGLEVSKLGYGCMGLTGAYNDPLPEEEGISVIKHAFSKGITFFDTSDMYGP 65
Query: 67 NANEVLLGKALKQLPREKIQVATKFGIAGIGVAGVIVKGAPDYVRSCCEASLKRLDVDYI 126
+ANE++LGKA+KQLPREKIQ+ATKFGI I +G++VKG P+Y RSCCEASLKRL V+YI
Sbjct: 66 HANEIVLGKAIKQLPREKIQIATKFGITKIDSSGMVVKGTPEYARSCCEASLKRLGVEYI 125
Query: 127 DLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPGTIRRAHAVHPITAVQMEWS 186
DLYYQHRVD SVPIEETIGE+KKLVEEGK++YIGLSEASP TIRRAHAVHPITAVQMEWS
Sbjct: 126 DLYYQHRVDLSVPIEETIGELKKLVEEGKVRYIGLSEASPDTIRRAHAVHPITAVQMEWS 185
Query: 187 LWTRDIEEEIIPLCRELGIGIVPYSPLGRGFFGGKAVVENVPADSFLV 234
LWTRDIE+EIIPLC+ELGIGIVPYSPLGRGFFGGK V+E V S L+
Sbjct: 186 LWTRDIEDEIIPLCKELGIGIVPYSPLGRGFFGGKGVLETVSTVSSLI 233
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|255542314|ref|XP_002512220.1| aldo/keto reductase, putative [Ricinus communis] gi|223548181|gb|EEF49672.1| aldo/keto reductase, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 390 bits (1001), Expect = e-106, Method: Compositional matrix adjust.
Identities = 180/234 (76%), Positives = 210/234 (89%)
Query: 1 MAEEKHQVPRVKLGTQGLEVSKLGYGCMNLSGGYSSPVSEEDGISMIKHAFSKGITFFDT 60
MA+E Q+PR KLG+QGLEVSKLG+GCM L+G Y+SP+S+EDGIS+++HAF KGITFFDT
Sbjct: 1 MAQENFQIPRTKLGSQGLEVSKLGFGCMGLTGVYNSPLSDEDGISILRHAFDKGITFFDT 60
Query: 61 ADVYGQNANEVLLGKALKQLPREKIQVATKFGIAGIGVAGVIVKGAPDYVRSCCEASLKR 120
+DVYG + NE+L+GKALKQLPREK+Q+ATKFGI + +IV G P+YVRS CEASLKR
Sbjct: 61 SDVYGPHTNEILVGKALKQLPREKVQLATKFGIVKMPPPKMIVNGIPEYVRSSCEASLKR 120
Query: 121 LDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPGTIRRAHAVHPITA 180
L +DYIDLYYQHRVDTSVPIEET+ E+KKLVEEGKIKYIGLSEASP TIRRAHAVHPITA
Sbjct: 121 LGIDYIDLYYQHRVDTSVPIEETMSELKKLVEEGKIKYIGLSEASPDTIRRAHAVHPITA 180
Query: 181 VQMEWSLWTRDIEEEIIPLCRELGIGIVPYSPLGRGFFGGKAVVENVPADSFLV 234
+Q+EWSLWTRD+EEEI+PLC+ELGIGIVPYSPLGRGFF GK VVE +PA+S LV
Sbjct: 181 LQIEWSLWTRDVEEEIVPLCKELGIGIVPYSPLGRGFFAGKGVVERLPANSMLV 234
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|110289083|gb|ABG66079.1| Auxin-induced protein PCNT115, putative, expressed [Oryza sativa Japonica Group] | Back alignment and taxonomy information |
|---|
Score = 387 bits (995), Expect = e-105, Method: Compositional matrix adjust.
Identities = 177/238 (74%), Positives = 213/238 (89%)
Query: 4 EKHQVPRVKLGTQGLEVSKLGYGCMNLSGGYSSPVSEEDGISMIKHAFSKGITFFDTADV 63
E Q+PRVKLGTQGLEVSKLG+GCM L+G Y++PV+EEDG+++++ AF G+TFFDT+D
Sbjct: 2 EHVQIPRVKLGTQGLEVSKLGFGCMGLTGVYNAPVAEEDGVAVVRRAFEAGVTFFDTSDA 61
Query: 64 YGQNANEVLLGKALKQLPREKIQVATKFGIAGIGVAGVIVKGAPDYVRSCCEASLKRLDV 123
YG + NEVLLGKALKQLPREK+QVATKFGIAG G++VKG PDYVR+CCEASL+RL V
Sbjct: 62 YGPHTNEVLLGKALKQLPREKVQVATKFGIAGFDANGMLVKGTPDYVRACCEASLERLAV 121
Query: 124 DYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPGTIRRAHAVHPITAVQM 183
DYIDLYYQHR+D SVPIEET+GE+KKLVEEGK+K++GLSEAS TIRRAHAV+PITAVQM
Sbjct: 122 DYIDLYYQHRIDQSVPIEETMGELKKLVEEGKVKFVGLSEASADTIRRAHAVYPITAVQM 181
Query: 184 EWSLWTRDIEEEIIPLCRELGIGIVPYSPLGRGFFGGKAVVENVPADSFLVLFSVNVY 241
EWSLWTRDIEEEIIPLCRELGIGIVPYSP+GRGFF G+A V+++P++S+LV + + Y
Sbjct: 182 EWSLWTRDIEEEIIPLCRELGIGIVPYSPIGRGFFAGRAAVQSIPSESWLVKLNSHYY 239
|
Source: Oryza sativa Japonica Group Species: Oryza sativa Genus: Oryza Family: Poaceae Order: Poales Class: Liliopsida Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225451312|ref|XP_002278643.1| PREDICTED: auxin-induced protein PCNT115 [Vitis vinifera] gi|298204874|emb|CBI34181.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 387 bits (993), Expect = e-105, Method: Compositional matrix adjust.
Identities = 186/230 (80%), Positives = 205/230 (89%), Gaps = 1/230 (0%)
Query: 7 QVPRVKLGTQGLEVSKLGYGCMNLSGGYSSPVSEEDGISMIKHAFSKGITFFDTADVYGQ 66
Q+PRVKLG QGLEVSKLG+GCM LSG Y++PV ++ GI++IKHAFSKGITFFDTADVYG
Sbjct: 5 QIPRVKLGNQGLEVSKLGFGCMGLSGVYNNPVPDDVGIAIIKHAFSKGITFFDTADVYGP 64
Query: 67 NANEVLLGKALKQLPREKIQVATKFGIAGIGVA-GVIVKGAPDYVRSCCEASLKRLDVDY 125
NEVL+GKALK+LPREKIQ+ATKFGIAG A G+ V G P YVRSCCEASLKRLDV+Y
Sbjct: 65 FTNEVLIGKALKELPREKIQLATKFGIAGFDPATGMTVNGTPKYVRSCCEASLKRLDVEY 124
Query: 126 IDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPGTIRRAHAVHPITAVQMEW 185
IDLYYQHRVD SVPIEET+ E+KKLV EGKIKYIGLSE SP TIRRAHAVHPITA+QMEW
Sbjct: 125 IDLYYQHRVDKSVPIEETMEELKKLVAEGKIKYIGLSEPSPDTIRRAHAVHPITALQMEW 184
Query: 186 SLWTRDIEEEIIPLCRELGIGIVPYSPLGRGFFGGKAVVENVPADSFLVL 235
SLWTRDIEEEI+PLCRELGIGIVPYSPLGRGFFGGK V EN PA++FL L
Sbjct: 185 SLWTRDIEEEIVPLCRELGIGIVPYSPLGRGFFGGKVVDENAPANTFLRL 234
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356505965|ref|XP_003521759.1| PREDICTED: auxin-induced protein PCNT115-like isoform 1 [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 387 bits (993), Expect = e-105, Method: Compositional matrix adjust.
Identities = 186/237 (78%), Positives = 210/237 (88%), Gaps = 2/237 (0%)
Query: 1 MAE-EKHQVPRVKLGTQGLEVSKLGYGCMNLSGGYSSPVSEEDGISMIKHAFSKGITFFD 59
MAE E Q+P+VKLGTQGL VSKLG GCM LSG Y+ P+ EE+GIS+IKHAFS+GITFFD
Sbjct: 1 MAEAESVQIPQVKLGTQGLVVSKLGLGCMTLSGRYNDPLPEEEGISVIKHAFSQGITFFD 60
Query: 60 TADVYG-QNANEVLLGKALKQLPREKIQVATKFGIAGIGVAGVIVKGAPDYVRSCCEASL 118
T+D+YG +ANE LLGKALKQLPREKIQVATKFG+A +KG P+YVRSCCEASL
Sbjct: 61 TSDLYGLDHANEFLLGKALKQLPREKIQVATKFGVAVAKFPNFQIKGTPEYVRSCCEASL 120
Query: 119 KRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPGTIRRAHAVHPI 178
KRLDV+YIDLYYQHR+D +VPIEET+GE+KKLVEEGK+KYIGLSEASP TIRRAHAVHPI
Sbjct: 121 KRLDVEYIDLYYQHRIDQTVPIEETVGELKKLVEEGKVKYIGLSEASPDTIRRAHAVHPI 180
Query: 179 TAVQMEWSLWTRDIEEEIIPLCRELGIGIVPYSPLGRGFFGGKAVVENVPADSFLVL 235
TA+Q+EWSLWTRDIEEEIIPLCRELGIGIVPYSPLGRGFFGGK V+EN+PA + L L
Sbjct: 181 TALQIEWSLWTRDIEEEIIPLCRELGIGIVPYSPLGRGFFGGKGVLENMPASTVLTL 237
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|359487894|ref|XP_002273300.2| PREDICTED: auxin-induced protein PCNT115-like [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 386 bits (992), Expect = e-105, Method: Compositional matrix adjust.
Identities = 186/228 (81%), Positives = 206/228 (90%), Gaps = 1/228 (0%)
Query: 7 QVPRVKLGTQGLEVSKLGYGCMNLSGGYSSPVSEEDGISMIKHAFSKGITFFDTADVYGQ 66
Q+PRVKLG QGLEVSKLG GC LSGGY++PV ++ GI++IKHAFSKGITFFDTAD YG
Sbjct: 10 QLPRVKLGNQGLEVSKLGLGCRGLSGGYNNPVPDDVGIAIIKHAFSKGITFFDTADAYGA 69
Query: 67 NANEVLLGKALKQLPREKIQVATKFGIAGIGVA-GVIVKGAPDYVRSCCEASLKRLDVDY 125
ANEVL+GKALK+LPREKIQ+ATKFG AG A G+IV G P YVRSCCEASLK LDV+Y
Sbjct: 70 QANEVLIGKALKELPREKIQLATKFGHAGFDPATGLIVNGTPKYVRSCCEASLKCLDVEY 129
Query: 126 IDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPGTIRRAHAVHPITAVQMEW 185
IDLYYQHR+D SVPIEET+GE+KKLVEE KIKYIGLSEASP TIRRA+AVHP+TA+QMEW
Sbjct: 130 IDLYYQHRIDKSVPIEETMGELKKLVEEEKIKYIGLSEASPDTIRRAYAVHPVTALQMEW 189
Query: 186 SLWTRDIEEEIIPLCRELGIGIVPYSPLGRGFFGGKAVVENVPADSFL 233
SLWTRDIEEEI+PLCRELGIGIVPYSPLGRGFFGGKAV ENVPA+SFL
Sbjct: 190 SLWTRDIEEEIVPLCRELGIGIVPYSPLGRGFFGGKAVDENVPANSFL 237
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|298204875|emb|CBI34182.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 386 bits (991), Expect = e-105, Method: Compositional matrix adjust.
Identities = 186/228 (81%), Positives = 206/228 (90%), Gaps = 1/228 (0%)
Query: 7 QVPRVKLGTQGLEVSKLGYGCMNLSGGYSSPVSEEDGISMIKHAFSKGITFFDTADVYGQ 66
Q+PRVKLG QGLEVSKLG GC LSGGY++PV ++ GI++IKHAFSKGITFFDTAD YG
Sbjct: 5 QLPRVKLGNQGLEVSKLGLGCRGLSGGYNNPVPDDVGIAIIKHAFSKGITFFDTADAYGA 64
Query: 67 NANEVLLGKALKQLPREKIQVATKFGIAGIGVA-GVIVKGAPDYVRSCCEASLKRLDVDY 125
ANEVL+GKALK+LPREKIQ+ATKFG AG A G+IV G P YVRSCCEASLK LDV+Y
Sbjct: 65 QANEVLIGKALKELPREKIQLATKFGHAGFDPATGLIVNGTPKYVRSCCEASLKCLDVEY 124
Query: 126 IDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPGTIRRAHAVHPITAVQMEW 185
IDLYYQHR+D SVPIEET+GE+KKLVEE KIKYIGLSEASP TIRRA+AVHP+TA+QMEW
Sbjct: 125 IDLYYQHRIDKSVPIEETMGELKKLVEEEKIKYIGLSEASPDTIRRAYAVHPVTALQMEW 184
Query: 186 SLWTRDIEEEIIPLCRELGIGIVPYSPLGRGFFGGKAVVENVPADSFL 233
SLWTRDIEEEI+PLCRELGIGIVPYSPLGRGFFGGKAV ENVPA+SFL
Sbjct: 185 SLWTRDIEEEIVPLCRELGIGIVPYSPLGRGFFGGKAVDENVPANSFL 232
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356573095|ref|XP_003554700.1| PREDICTED: LOW QUALITY PROTEIN: auxin-induced protein PCNT115-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 386 bits (991), Expect = e-105, Method: Compositional matrix adjust.
Identities = 183/229 (79%), Positives = 207/229 (90%), Gaps = 1/229 (0%)
Query: 7 QVPRVKLGTQGLEVSKLGYGCMNLSGGYSSPVSEEDGISMIKHAFSKGITFFDTADVYG- 65
++PRVKLGTQGLEVSKLGYGCM L+G Y+ P+ EE+GIS+IKHAFSKGITFFDT+D+YG
Sbjct: 6 EIPRVKLGTQGLEVSKLGYGCMGLTGAYNDPLPEEEGISIIKHAFSKGITFFDTSDIYGP 65
Query: 66 QNANEVLLGKALKQLPREKIQVATKFGIAGIGVAGVIVKGAPDYVRSCCEASLKRLDVDY 125
+ANE+++GKALKQLPREKIQ+ATKFGI I +G+ VKG P+Y RSCCEASLKRL V+Y
Sbjct: 66 DHANEIVVGKALKQLPREKIQIATKFGITKIDSSGMFVKGTPEYARSCCEASLKRLGVEY 125
Query: 126 IDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPGTIRRAHAVHPITAVQMEW 185
IDLYYQHRVD SVPIEETIGE+KKLVEEGK++YIGLSEASP TIRRAHAVHPITAVQMEW
Sbjct: 126 IDLYYQHRVDLSVPIEETIGELKKLVEEGKVRYIGLSEASPDTIRRAHAVHPITAVQMEW 185
Query: 186 SLWTRDIEEEIIPLCRELGIGIVPYSPLGRGFFGGKAVVENVPADSFLV 234
SLWTRDIE+EIIPLC+ELGIGIVPYSPLGRGFFGGK V+E V S LV
Sbjct: 186 SLWTRDIEDEIIPLCKELGIGIVPYSPLGRGFFGGKGVLETVSTVSSLV 234
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 252 | ||||||
| TAIR|locus:2036504 | 345 | ATB2 [Arabidopsis thaliana (ta | 0.888 | 0.649 | 0.663 | 3.5e-75 | |
| TAIR|locus:2036551 | 330 | AT1G60750 [Arabidopsis thalian | 0.869 | 0.663 | 0.652 | 2.5e-74 | |
| TAIR|locus:2036611 | 345 | AT1G60690 "AT1G60690" [Arabido | 0.904 | 0.660 | 0.634 | 5.1e-74 | |
| TAIR|locus:2036591 | 346 | AT1G60680 "AT1G60680" [Arabido | 0.908 | 0.661 | 0.630 | 8.4e-74 | |
| TAIR|locus:2196446 | 344 | AT1G10810 "AT1G10810" [Arabido | 0.869 | 0.636 | 0.624 | 1.5e-67 | |
| TIGR_CMR|SPO_A0345 | 327 | SPO_A0345 "oxidoreductase, ald | 0.829 | 0.639 | 0.535 | 1.3e-52 | |
| TIGR_CMR|GSU_3126 | 334 | GSU_3126 "oxidoreductase, aldo | 0.825 | 0.622 | 0.506 | 2.4e-51 | |
| UNIPROTKB|G4NAH9 | 341 | MGG_09715 "Aldo-keto reductase | 0.924 | 0.683 | 0.429 | 1.2e-44 | |
| POMBASE|SPAC1F7.12 | 340 | yak3 "aldose reductase ARK13 f | 0.833 | 0.617 | 0.454 | 1.1e-41 | |
| ASPGD|ASPL0000072041 | 351 | AN8733 [Emericella nidulans (t | 0.821 | 0.589 | 0.413 | 4.2e-40 |
| TAIR|locus:2036504 ATB2 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 758 (271.9 bits), Expect = 3.5e-75, P = 3.5e-75
Identities = 150/226 (66%), Positives = 171/226 (75%)
Query: 8 VPRVKLGTQGLEVSKLGYGCMNLSGGYSSPVSEEDGISMIKHAFSKGITFFDTADVYGQN 67
V R+KLG+QGLEVS G GCM LS Y +P E + I++I HA G+T DT+D+YG
Sbjct: 7 VRRMKLGSQGLEVSAQGLGCMGLSAFYGAPKPENEAIALIHHAIHSGVTLLDTSDIYGPE 66
Query: 68 ANEVLLGKALKQLPREKIQVATKFXXXXXXXXXXXXXXXPDYVRSCCEASLKRLDVDYID 127
NEVLLGKALK REK+++ATKF P+YVR+ CEASLKRLD+ ID
Sbjct: 67 TNEVLLGKALKDGVREKVELATKFGISYAEGKREVRGD-PEYVRAACEASLKRLDIACID 125
Query: 128 LYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPGTIRRAHAVHPITAVQMEWSL 187
LYYQHRVDT VPIE T+GE+KKLVEEGKIKYIGLSEAS TIRRAHAVHPITAVQ+EWSL
Sbjct: 126 LYYQHRVDTRVPIEITMGELKKLVEEGKIKYIGLSEASASTIRRAHAVHPITAVQIEWSL 185
Query: 188 WTRDIEEEIIPLCRELGIGIVPYSPLGRGFFG-GKAVVENVPADSF 232
WTRD+EEEIIP CRELGIGIV YSPLGRGFF G +VEN+ D F
Sbjct: 186 WTRDVEEEIIPTCRELGIGIVAYSPLGRGFFASGPKLVENLEKDDF 231
|
|
| TAIR|locus:2036551 AT1G60750 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 750 (269.1 bits), Expect = 2.5e-74, P = 2.5e-74
Identities = 143/219 (65%), Positives = 170/219 (77%)
Query: 1 MAEEKHQVPRVKLGTQGLEVSKLGYGCMNLSGGYSSPVSEEDGISMIKHAFSKGITFFDT 60
MAEE QV R+KLG+QGLEVS G GCM LS Y +P E + +++++HA + G+TF DT
Sbjct: 1 MAEEACQVRRMKLGSQGLEVSAQGLGCMGLSDFYGAPTPETNAVALLRHAINAGVTFLDT 60
Query: 61 ADVYGQNANEVLLGKALKQLPREKIQVATKFXXXXXXXXXXXXXXXPDYVRSCCEASLKR 120
+D+YG NE+LLGKALK R+K+++ATKF P+YVR CEASLKR
Sbjct: 61 SDIYGPETNELLLGKALKDGLRDKVELATKFGITASEDGKFGFRGDPEYVRIACEASLKR 120
Query: 121 LDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPGTIRRAHAVHPITA 180
L V IDLYYQHR+DT++PIE TIGE+KKLVEEGKIKYIGLSEAS TIRRAHAVHPITA
Sbjct: 121 LGVTCIDLYYQHRIDTTLPIEITIGELKKLVEEGKIKYIGLSEASASTIRRAHAVHPITA 180
Query: 181 VQMEWSLWTRDIEEEIIPLCRELGIGIVPYSPLGRGFFG 219
VQ+EWSLW+RD+EE+IIP CRELGIGIV YSPLGRGF G
Sbjct: 181 VQIEWSLWSRDVEEDIIPTCRELGIGIVAYSPLGRGFLG 219
|
|
| TAIR|locus:2036611 AT1G60690 "AT1G60690" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 747 (268.0 bits), Expect = 5.1e-74, P = 5.1e-74
Identities = 146/230 (63%), Positives = 172/230 (74%)
Query: 4 EKHQVPRVKLGTQGLEVSKLGYGCMNLSGGYSSPVSEEDGISMIKHAFSKGITFFDTADV 63
E +V R+KLG+QGLEVS G GCM L+G Y + E + I++I HA G+TF DT+D+
Sbjct: 3 ESCRVRRIKLGSQGLEVSAQGLGCMGLTGHYGASKPETEAIALIHHAIHSGVTFLDTSDM 62
Query: 64 YGQNANEVLLGKALKQLPREKIQVATKFXXXXXXXXXXXXXXXPDYVRSCCEASLKRLDV 123
YG NE+LLGKALK REK+++ATKF P YVR+ CEASLKRLDV
Sbjct: 63 YGPETNEILLGKALKDGVREKVELATKFGISYAEGNREIKGD-PAYVRAACEASLKRLDV 121
Query: 124 DYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPGTIRRAHAVHPITAVQM 183
IDLYYQHR+DT VPIE T+GE+KKL+EEGKIKYIGLSEAS TIRRAH VHPITAVQ+
Sbjct: 122 TCIDLYYQHRIDTRVPIEITMGELKKLIEEGKIKYIGLSEASASTIRRAHTVHPITAVQL 181
Query: 184 EWSLWTRDIEEEIIPLCRELGIGIVPYSPLGRGFFG-GKAVVENVPADSF 232
EWSLWTRD+EEEI+P CRELGIGIV YSPLGRGFF G +VEN+ + F
Sbjct: 182 EWSLWTRDVEEEIVPTCRELGIGIVSYSPLGRGFFASGPKLVENLDNNDF 231
|
|
| TAIR|locus:2036591 AT1G60680 "AT1G60680" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 745 (267.3 bits), Expect = 8.4e-74, P = 8.4e-74
Identities = 145/230 (63%), Positives = 173/230 (75%)
Query: 4 EKHQVPRVKLGTQGLEVSKLGYGCMNLSGGYSSPVSEEDGISMIKHAFSKGITFFDTADV 63
E +V R+KLG+QGLEVS G GCM LS Y +P E D I+++ HA + G+TFFDT+D+
Sbjct: 3 EACRVRRMKLGSQGLEVSAQGLGCMALSARYGAPKPETDAIALLHHAINSGVTFFDTSDM 62
Query: 64 YGQNANEVLLGKALKQLPREKIQVATKFXXXXXXXXXXXXXXXPDYVRSCCEASLKRLDV 123
YG NE+LLGKALK +EK+++ATKF P+YVR+ CEASLKRLD+
Sbjct: 63 YGPETNELLLGKALKDGVKEKVELATKFGFFIVEGEISEVRGDPEYVRAACEASLKRLDI 122
Query: 124 DYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPGTIRRAHAVHPITAVQM 183
IDLYYQHR+DT VPIE T+ E+KKLVEEGKIKYIGLSEAS TIRRAHAVHPITAVQ+
Sbjct: 123 ACIDLYYQHRIDTRVPIEITMRELKKLVEEGKIKYIGLSEASASTIRRAHAVHPITAVQI 182
Query: 184 EWSLWTRDIEEEIIPLCRELGIGIVPYSPLGRGFFG-GKAVVENVPADSF 232
EWSLW+RD EE+IIP+CRELGIGIV YSPLGRGF G + EN+ D F
Sbjct: 183 EWSLWSRDAEEDIIPICRELGIGIVAYSPLGRGFLAAGPKLAENLENDDF 232
|
|
| TAIR|locus:2196446 AT1G10810 "AT1G10810" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 686 (246.5 bits), Expect = 1.5e-67, P = 1.5e-67
Identities = 138/221 (62%), Positives = 164/221 (74%)
Query: 8 VPRVKLGTQGLEVSKLGYGCMNLSGGYSSPVSEEDGISMIKHAFSKGITFFDTADVYGQN 67
V R+KLG+QGLEVS G GCM LS + E D I++I HA + GIT DT+D+YG
Sbjct: 7 VRRIKLGSQGLEVSAQGLGCMGLSIFDGTTKVETDLIALIHHAINSGITLLDTSDIYGPE 66
Query: 68 ANEVLLGKALKQLPREKIQVATKFXXXXXXXXXXXXXXXPDYVRSCCEASLKRLDVDYID 127
NE+LLG+ALK REK+++ATKF P YVR+ CEASL+RL V ID
Sbjct: 67 TNELLLGQALKDGMREKVELATKFGLLLKDQKLGYRGD-PAYVRAACEASLRRLGVSCID 125
Query: 128 LYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPGTIRRAHAVHPITAVQMEWSL 187
LYYQHR+DT+VPIE TIGE+KKLVEEGKIKYIGLSEA TIRRAHAVHP+TAVQ+EWSL
Sbjct: 126 LYYQHRIDTTVPIEVTIGELKKLVEEGKIKYIGLSEACASTIRRAHAVHPLTAVQLEWSL 185
Query: 188 WTRDIEEEIIPLCRELGIGIVPYSPLGRGFFG-GKAVVENV 227
W+RD+EE+IIP CRELGIGIV YSPLG GFF G +E++
Sbjct: 186 WSRDVEEDIIPTCRELGIGIVAYSPLGLGFFAAGPKFIESM 226
|
|
| TIGR_CMR|SPO_A0345 SPO_A0345 "oxidoreductase, aldo/keto reductase family" [Ruegeria pomeroyi DSS-3 (taxid:246200)] | Back alignment and assigned GO terms |
|---|
Score = 545 (196.9 bits), Expect = 1.3e-52, P = 1.3e-52
Identities = 114/213 (53%), Positives = 141/213 (66%)
Query: 10 RVKLGTQGLEVSKLGYGCMNLSGGYSSPVSEEDGISMIKHAFSKGITFFDTADVYGQNAN 69
R KLG Q LEVS +G GCM +S Y P +E + ++ A GI FFDTAD+YG + N
Sbjct: 3 RRKLG-QDLEVSAIGLGCMGMSEFYG-PRDDEKSLDVMSRAVVLGIDFFDTADMYGPHHN 60
Query: 70 EVLLGKALKQLPREKIQVATKFXXXXX-XXXXXXXXXXPDYVRSCCEASLKRLDVDYIDL 128
E L+G L+Q R +IQVATKF Y R+ CE SL+RL VD IDL
Sbjct: 61 EELIGTFLRQ-SRARIQVATKFGIVRNPGEYKRSLDNSASYARTACEGSLRRLGVDCIDL 119
Query: 129 YYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPGTIRRAHAVHPITAVQMEWSLW 188
YY HRV+T+ PIEET+ + LV+EGKI IGL E S T+RRAHAVHP+TAVQ E+SLW
Sbjct: 120 YYVHRVNTNQPIEETMEGLAALVKEGKIARIGLCEVSAETLRRAHAVHPVTAVQTEYSLW 179
Query: 189 TRDIEEEIIPLCRELGIGIVPYSPLGRGFFGGK 221
+R++E ++P CR LGIG VPYSPLGRGF G+
Sbjct: 180 SREVENSVLPTCRALGIGFVPYSPLGRGFLTGR 212
|
|
| TIGR_CMR|GSU_3126 GSU_3126 "oxidoreductase, aldo/keto reductase family" [Geobacter sulfurreducens PCA (taxid:243231)] | Back alignment and assigned GO terms |
|---|
Score = 533 (192.7 bits), Expect = 2.4e-51, P = 2.4e-51
Identities = 109/215 (50%), Positives = 141/215 (65%)
Query: 13 LGTQGLEVSKLGYGCMNLSGGYSSPVSEEDGISMIKHAFSKGITFFDTADVYGQNANEVL 72
LG GLEVS LG GCM +S Y P E+ I++++ A +GITFFDTA+VYG NE L
Sbjct: 6 LGKSGLEVSALGLGCMGMSFSYGPPKDREEMIALLRTAVERGITFFDTAEVYGPFINEEL 65
Query: 73 LGKALKQLPREKIQVATKFXXXXXXXXXXXXX------XXPDYVRSCCEASLKRLDVDYI 126
+G+AL L RE++ +ATKF P+++R+ EASL+RL D I
Sbjct: 66 VGEALAPL-RERVVIATKFGFDTSVDPRAMKGQGPVLNSRPEHIRAVAEASLRRLRTDVI 124
Query: 127 DLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPGTIRRAHAVHPITAVQMEWS 186
DL+YQHRVD +VPIEE G +K+L+ EGK+K+ GLSEA T+RRAHAV P+ VQ E+S
Sbjct: 125 DLFYQHRVDPAVPIEEVAGAVKELIREGKVKHFGLSEAGIETVRRAHAVQPVACVQNEYS 184
Query: 187 LWTRDIEEEIIPLCRELGIGIVPYSPLGRGFFGGK 221
LW R EE ++ ELGIG+V YSPLG+GF GK
Sbjct: 185 LWFRRPEEGLLQALEELGIGLVAYSPLGKGFLTGK 219
|
|
| UNIPROTKB|G4NAH9 MGG_09715 "Aldo-keto reductase yakc" [Magnaporthe oryzae 70-15 (taxid:242507)] | Back alignment and assigned GO terms |
|---|
Score = 470 (170.5 bits), Expect = 1.2e-44, P = 1.2e-44
Identities = 106/247 (42%), Positives = 147/247 (59%)
Query: 7 QVPRVKLGTQGLEVSKLGYGCMNLSGGYSSPVSEEDGISMIKHAFSKGITFFDTADVYGQ 66
Q+P ++G G EV+ +G+G M LS GY + SEE+ ++ A+ G T +DTAD+YG
Sbjct: 6 QIPTRRMGKDGPEVACIGFGLMGLSFGYGAVESEEERFKVLDRAWEIGATNWDTADIYGD 65
Query: 67 NANEVLLGKALKQLP--REKIQVATKFXXXXXXXXXXXXXXXPDYVRSCCEASLKRLDVD 124
+ E L+GK K P R+ I +ATKF P+Y R S +RL VD
Sbjct: 66 S--EDLVGKWFKMHPERRKDIFLATKFGVTGTIENLSANSS-PEYCRQASRRSFERLGVD 122
Query: 125 YIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPGTIRRAHAVHPITAVQME 184
Y+DLYY HR+ SVP+E+TI M +LV+EGK+KY+G+SE S ++RRAH VHPI AVQ+E
Sbjct: 123 YVDLYYVHRLTESVPVEKTIEAMAELVKEGKVKYLGMSECSSSSVRRAHKVHPIAAVQVE 182
Query: 185 WSLWTRDIEEE----IIPLCRELGIGIVPYSPLGRGFFGG--KAVVE-NVPADS--FLVL 235
++ W IE + ++ CRELGI +V YSP RG G K+ + N P D FL
Sbjct: 183 YNPWDLAIEGDEGTNLLATCRELGISVVAYSPFSRGLLTGALKSREDFNDPTDCRLFLPR 242
Query: 236 FSVNVYP 242
+S +P
Sbjct: 243 YSEENFP 249
|
|
| POMBASE|SPAC1F7.12 yak3 "aldose reductase ARK13 family YakC" [Schizosaccharomyces pombe (taxid:4896)] | Back alignment and assigned GO terms |
|---|
Score = 442 (160.7 bits), Expect = 1.1e-41, P = 1.1e-41
Identities = 99/218 (45%), Positives = 131/218 (60%)
Query: 8 VPRVKLGTQGLEVSKLGYGCMNLSGGYSSPVSEEDGISMIKHAFSKGITFFDTADVYGQN 67
+P K+G V +G+GCM L Y P SEE +++ HA G TF+D++D+YG
Sbjct: 3 IPTRKIGND--TVPAIGFGCMGLHAMYG-PSSEEANQAVLTHAADLGCTFWDSSDMYGFG 59
Query: 68 ANEVLLGKALKQLPREK-IQVATKFXXXXX-XXXXXXXXXXPDYVRSCCEASLKRLDVDY 125
ANE +G+ KQ R K I +ATKF PDY+ + SLKRL +D
Sbjct: 60 ANEECIGRWFKQTGRRKEIFLATKFGYEKNPETGELSLNNEPDYIEKALDLSLKRLGIDC 119
Query: 126 IDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPGTIRRAHAVHPITAVQMEW 185
IDLYY HR PIE+ +G +KK VE GKI+YIGLSE S TIRRA AV+P++AVQ+E+
Sbjct: 120 IDLYYVHRFSGETPIEKIMGALKKCVEAGKIRYIGLSECSANTIRRAAAVYPVSAVQVEY 179
Query: 186 SLWTRDIEEE---IIPLCRELGIGIVPYSPLGRGFFGG 220
S ++ +IE ++ CRE I IV Y+PLGRGF G
Sbjct: 180 SPFSLEIERPEIGVMKACRENNITIVCYAPLGRGFLTG 217
|
|
| ASPGD|ASPL0000072041 AN8733 [Emericella nidulans (taxid:162425)] | Back alignment and assigned GO terms |
|---|
Score = 427 (155.4 bits), Expect = 4.2e-40, P = 4.2e-40
Identities = 88/213 (41%), Positives = 132/213 (61%)
Query: 14 GTQGLEVSKLGYGCMNLSGGYSSPVSEEDGISMIKHAFSKGITFFDTADVYGQNANEVLL 73
G +V +G G +LSG Y S E +S++ +A++ G+ F+D AD+YG +A +++
Sbjct: 11 GPDAPQVPCMGLGFGSLSGFYGPAGSPESRLSLLDNAYAAGLRFWDLADIYG-DAEDLVS 69
Query: 74 GKALKQLP--REKIQVATKFXXXXXXXXXXXXXXXPDYVRSCCEASLKRLDVDYIDLYYQ 131
+ P R+ + +ATKF PDYV+ CE SLKRL V+ IDLYY
Sbjct: 70 EWVKRSDPAKRDDVFIATKFGLQRQADGMHRFRSDPDYVKEACERSLKRLGVNTIDLYYC 129
Query: 132 HRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPGTIRRAHAVHPITAVQMEWSLWTRD 191
HRVD P+E T+ M L ++GKI+++GLS+ S T+RRAHAVHPI A+Q+E+SL+T D
Sbjct: 130 HRVDGVTPVERTVEAMVDLKKQGKIRHLGLSDISASTLRRAHAVHPIAALQVEYSLFTLD 189
Query: 192 IEE---EIIPLCRELGIGIVPYSPLGRGFFGGK 221
IE +++ RELG+ ++ +SP+GRG G+
Sbjct: 190 IESSESDVLQTARELGVTVIAFSPIGRGILSGQ 222
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries 
Original result of BLAST against SWISS-PROT
ID ![]() | Name ![]() | Annotated EC number ![]() | Identity ![]() | Query coverage ![]() | Hit coverage ![]() | RBH(Q2H) ![]() | RBH(H2Q) ![]() |
| C6TBN2 | AKR1_SOYBN | 1, ., 1, ., 1, ., - | 0.8061 | 0.9007 | 0.6560 | yes | no |
| Q3L181 | PERR_RAUSE | 1, ., 1, ., 1, ., 3, 1, 7 | 0.7543 | 0.9007 | 0.6735 | N/A | no |
| Q93ZN2 | ALKR4_ARATH | 1, ., 1, ., 1, ., - | 0.6814 | 0.8888 | 0.6492 | yes | no |
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 252 | |||
| cd06660 | 285 | cd06660, Aldo_ket_red, Aldo-keto reductases (AKRs) | 2e-88 | |
| COG0667 | 316 | COG0667, Tas, Predicted oxidoreductases (related t | 2e-84 | |
| pfam00248 | 277 | pfam00248, Aldo_ket_red, Aldo/keto reductase famil | 2e-69 | |
| COG0656 | 280 | COG0656, ARA1, Aldo/keto reductases, related to di | 3e-38 | |
| COG4989 | 298 | COG4989, COG4989, Predicted oxidoreductase [Genera | 7e-32 | |
| PLN02587 | 314 | PLN02587, PLN02587, L-galactose dehydrogenase | 6e-30 | |
| COG1453 | 391 | COG1453, COG1453, Predicted oxidoreductases of the | 9e-29 | |
| PRK09912 | 346 | PRK09912, PRK09912, L-glyceraldehyde 3-phosphate r | 1e-22 | |
| TIGR01293 | 317 | TIGR01293, Kv_beta, voltage-dependent potassium ch | 1e-21 | |
| PRK10625 | 346 | PRK10625, tas, putative aldo-keto reductase; Provi | 1e-21 | |
| PRK10376 | 290 | PRK10376, PRK10376, putative oxidoreductase; Provi | 2e-17 | |
| PRK11565 | 275 | PRK11565, dkgA, 2,5-diketo-D-gluconate reductase A | 1e-10 | |
| PRK11172 | 267 | PRK11172, dkgB, 2,5-diketo-D-gluconate reductase B | 2e-07 |
| >gnl|CDD|119408 cd06660, Aldo_ket_red, Aldo-keto reductases (AKRs) are a superfamily of soluble NAD(P)(H) oxidoreductases whose chief purpose is to reduce aldehydes and ketones to primary and secondary alcohols | Back alignment and domain information |
|---|
Score = 262 bits (673), Expect = 2e-88
Identities = 97/229 (42%), Positives = 131/229 (57%), Gaps = 11/229 (4%)
Query: 10 RVKLGTQGLEVSKLGYGCMNLSGGYSSPVSEEDGISMIKHAFSKGITFFDTADVYGQNAN 69
LG GL+VS+LG G L GGY V EE+ + ++ A GI F DTADVYG +
Sbjct: 1 YRTLGKTGLKVSRLGLGTWQLGGGY---VDEEEAAAAVRAALDAGINFIDTADVYGDGES 57
Query: 70 EVLLGKALKQLP-REKIQVATKFGIAGIGVAGVIVKGAPDYVRSCCEASLKRLDVDYIDL 128
E LLG+ALK+ RE++ +ATK G +P+++R E SLKRL DYIDL
Sbjct: 58 EELLGEALKERGPREEVFIATKVGPRPGDGRD----LSPEHIRRAVEESLKRLGTDYIDL 113
Query: 129 YYQHRVDTSVP-IEETIGEMKKLVEEGKIKYIGLSEASPGTIRRAHAV--HPITAVQMEW 185
Y H D P IEET+ +++LV+EGKI+ IG+S S + A A P Q+E+
Sbjct: 114 YLLHWPDPDTPDIEETLRALEELVKEGKIRAIGVSNFSAEQLEEALAAAGVPPAVNQVEY 173
Query: 186 SLWTRDIEEEIIPLCRELGIGIVPYSPLGRGFFGGKAVVENVPADSFLV 234
+L R EEE++P CRE GIG++ YSPL G GK + P + L+
Sbjct: 174 NLLDRQAEEELLPYCREHGIGVIAYSPLAGGLLTGKYLPGAPPPEGDLL 222
|
AKRs are present in all phyla and are of importance to both health and industrial applications. Members have very distinct functions and include the prokaryotic 2,5-diketo-D-gluconic acid reductases and beta-keto ester reductases, the eukaryotic aldose reductases, aldehyde reductases, hydroxysteroid dehydrogenases, steroid 5beta-reductases, potassium channel beta-subunits and aflatoxin aldehyde reductases, among others. Length = 285 |
| >gnl|CDD|223739 COG0667, Tas, Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) [Energy production and conversion] | Back alignment and domain information |
|---|
Score = 254 bits (651), Expect = 2e-84
Identities = 101/214 (47%), Positives = 131/214 (61%), Gaps = 4/214 (1%)
Query: 11 VKLGTQGLEVSKLGYGCMNLSGGYSSPVSEEDGISMIKHAFSKGITFFDTADVYGQNANE 70
+LG GL+VS LG G M L G E + I ++ A GI FFDTADVYG +E
Sbjct: 4 RRLGRSGLKVSPLGLGTMTLGGDTDDE-EEAEAIEILDAALDAGINFFDTADVYGDGRSE 62
Query: 71 VLLGKALKQLP-REKIQVATKFG-IAGIGVAGVIVKGAPDYVRSCCEASLKRLDVDYIDL 128
+LG+ALK+ R+K+ +ATK G G + + D++R EASLKRL DYIDL
Sbjct: 63 EILGEALKERGRRDKVVIATKVGYRPGDPGPNGVFGLSRDHIRRAVEASLKRLGTDYIDL 122
Query: 129 YYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPGTIRRAHAV-HPITAVQMEWSL 187
Y HR D PIEET+ + +LV EGKI+YIG+S S I A AV PI ++Q E++L
Sbjct: 123 YQLHRPDPETPIEETLEALDELVREGKIRYIGVSNYSAEQIAEALAVAAPIDSLQPEYNL 182
Query: 188 WTRDIEEEIIPLCRELGIGIVPYSPLGRGFFGGK 221
RD E+E++PLCRE GIG++ YSPL G GK
Sbjct: 183 LERDAEKELLPLCREEGIGLLAYSPLASGLLTGK 216
|
Length = 316 |
| >gnl|CDD|215817 pfam00248, Aldo_ket_red, Aldo/keto reductase family | Back alignment and domain information |
|---|
Score = 214 bits (548), Expect = 2e-69
Identities = 87/203 (42%), Positives = 125/203 (61%), Gaps = 10/203 (4%)
Query: 22 KLGYGCMNLSGGYSSPVSEEDGISMIKHAFSKGITFFDTADVYGQNANEVLLGKALKQL- 80
+LG G +L G +S+E+ + +++ A GI DTA+VYG +E LLG+ALK+
Sbjct: 1 RLGLGTWSLGGL---AISKEEALELLRAALEAGINLIDTAEVYGDGPSEELLGEALKKYV 57
Query: 81 PREKIQVATKFGIAGIGVAGVIVKGAPDYVRSCCEASLKRLDVDYIDLYYQHRVDTSVPI 140
PR+++ +ATK G G G+ + ++ E SLKRL DY+DLY H D S+PI
Sbjct: 58 PRDEVFIATKVGPPGPPPDD----GSRENIKKSIEESLKRLGTDYLDLYLLHWPDPSLPI 113
Query: 141 EETIGEMKKLVEEGKIKYIGLSEASPGTIRRA--HAVHPITAVQMEWSLWTRDIEEEIIP 198
EET+ +++L +EGKI++IG+S S +R A H PI VQ+E+SL R EE ++
Sbjct: 114 EETLEALEELKKEGKIRHIGVSNFSVEQLREALEHGKVPIVVVQVEYSLLRRLAEEGLLE 173
Query: 199 LCRELGIGIVPYSPLGRGFFGGK 221
LC+E GIGI+ YSPLG G GK
Sbjct: 174 LCQENGIGIIAYSPLGGGLLTGK 196
|
This family includes a number of K+ ion channel beta chain regulatory domains - these are reported to have oxidoreductase activity. Length = 277 |
| >gnl|CDD|223729 COG0656, ARA1, Aldo/keto reductases, related to diketogulonate reductase [General function prediction only] | Back alignment and domain information |
|---|
Score = 134 bits (339), Expect = 3e-38
Identities = 66/214 (30%), Positives = 102/214 (47%), Gaps = 28/214 (13%)
Query: 9 PRVKLGTQGLEVSKLGYGCMNLSGGYSSPVSEEDGISMIKHAFSKGITFFDTADVYGQNA 68
+V L G+E+ +G G + E + ++ A G DTA++YG
Sbjct: 4 TKVTLNN-GVEIPAIGLGTWQIGDD-------EWAVRAVRAALELGYRLIDTAEIYG--- 52
Query: 69 NEVLLGKALKQL--PREKIQVATKFGIAGIGVAGVIVKGAPDYVRSCCEASLKRLDVDYI 126
NE +G+A+K+ PRE++ + TK V D EASLKRL +DY+
Sbjct: 53 NEEEVGEAIKESGVPREELFITTK-------VW--PSDLGYDETLKALEASLKRLGLDYV 103
Query: 127 DLYYQH--RVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPGTIRRA--HAVHPITAVQ 182
DLY H + V IEET +++LV+EG I+ IG+S + A Q
Sbjct: 104 DLYLIHWPVPNKYVVIEETWKALEELVDEGLIRAIGVSNFGVEHLEELLSLAKVKPAVNQ 163
Query: 183 MEWSLWTRDIEEEIIPLCRELGIGIVPYSPLGRG 216
+E+ + R + E++P C+ GI + YSPL +G
Sbjct: 164 IEYHPYLR--QPELLPFCQRHGIAVEAYSPLAKG 195
|
Length = 280 |
| >gnl|CDD|227322 COG4989, COG4989, Predicted oxidoreductase [General function prediction only] | Back alignment and domain information |
|---|
Score = 118 bits (297), Expect = 7e-32
Identities = 67/216 (31%), Positives = 105/216 (48%), Gaps = 13/216 (6%)
Query: 10 RVKLGTQGLEVSKLGYGCMNLSGGYSSPVSEEDGISMIKHAFSKGITFFDTADVYGQNAN 69
R+ L GLE S++ G L+ +S + +S I+ A GIT FD AD+YG
Sbjct: 3 RITLAPDGLEFSRIVLGYWRLNDW---NMSARELLSFIETALELGITTFDHADIYGGYQC 59
Query: 70 EVLLGKALKQLP--REKIQVATKFGIAGIGVAGVIVKG----APDYVRSCCEASLKRLDV 123
E L G+ALK P REKI++ +K GI + G + +++ E SL L
Sbjct: 60 EALFGEALKLAPGLREKIEIVSKCGIR-LPSREEPRIGHYDTSKEHIIKSVEQSLINLKT 118
Query: 124 DYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPGTIR--RAHAVHPITAV 181
DY+DL HR D + EE L + GK+++ G+S +P ++ +
Sbjct: 119 DYLDLLLIHRPDPLMDAEEVAEAFTHLHKSGKVRHFGVSNFNPAQFELLQSRLPFTLVTN 178
Query: 182 QMEWS-LWTRDIEEEIIPLCRELGIGIVPYSPLGRG 216
Q+E S L T + + + C++L + + +SPLG G
Sbjct: 179 QLELSPLHTPMLLDGTLDYCQQLRVRPMAWSPLGGG 214
|
Length = 298 |
| >gnl|CDD|178198 PLN02587, PLN02587, L-galactose dehydrogenase | Back alignment and domain information |
|---|
Score = 113 bits (285), Expect = 6e-30
Identities = 78/227 (34%), Positives = 118/227 (51%), Gaps = 15/227 (6%)
Query: 12 KLGTQGLEVSKLGYGCMNLSGGYSSPVSEEDGISMIKHAFSKGITFFDTADVYGQNANEV 71
+LG+ GL+VS +G+G L G PVSEED I+ ++ AF GI FFDT+ YG +E
Sbjct: 3 ELGSTGLKVSSVGFGASPL-GSVFGPVSEEDAIASVREAFRLGINFFDTSPYYGGTLSEK 61
Query: 72 LLGKALK--QLPREKIQVATKFGIAGIGVAGVIVKGAPDYVRSCCEASLKRLDVDYIDLY 129
+LGKALK +PREK V+TK G G G + + V + SL RL +DY+D+
Sbjct: 62 VLGKALKALGIPREKYVVSTKCGRYGEG-----FDFSAERVTKSVDESLARLQLDYVDIL 116
Query: 130 YQHRVD-TSVP--IEETIGEMKKLVEEGKIKYIGLSEASPGTIRRAHAVHPITAVQMEWS 186
+ H ++ S+ + ETI ++KL E GK+++IG++ P V + S
Sbjct: 117 HCHDIEFGSLDQIVNETIPALQKLKESGKVRFIGITGLPLAIFTYVLDRVPPGTVDVILS 176
Query: 187 LWTRDIE----EEIIPLCRELGIGIVPYSPLGRGFFGGKAVVENVPA 229
+ E+++P + G+G++ SPL G E PA
Sbjct: 177 YCHYSLNDSSLEDLLPYLKSKGVGVISASPLAMGLLTENGPPEWHPA 223
|
Length = 314 |
| >gnl|CDD|224370 COG1453, COG1453, Predicted oxidoreductases of the aldo/keto reductase family [General function prediction only] | Back alignment and domain information |
|---|
Score = 111 bits (280), Expect = 9e-29
Identities = 65/217 (29%), Positives = 92/217 (42%), Gaps = 25/217 (11%)
Query: 12 KLGTQGLEVSKLGYGCMNLSGGYSSPVSEEDGISMIKHAFSKGITFFDTADVYGQNANEV 71
K G E+S LG+GCM L + EE+ I +A GI + DTA Y +E
Sbjct: 5 KFPKTGDELSILGFGCMRLPLKEQGSIDEENANETIDYAIEHGINYIDTAWPYHGGESEE 64
Query: 72 LLGKALKQLPREKIQVATKFGIAGIGVAGVIVKGAPDYVRSCCEASLKRLDVDYIDLYYQ 131
LGKALK REK+++ATK + VK D L++L DYID Y
Sbjct: 65 FLGKALKDGYREKVKLATK-------LPSWPVKDREDM-ERIFNEQLEKLGTDYIDYYLI 116
Query: 132 HRVDTSVPIEETIGEMK---------KLVEEGKIKYIGLS-EASPGTIRRAHAVHPITAV 181
H ++T ET +++ K EGKI+ G S S + +P V
Sbjct: 117 HGLNT-----ETWEKIERLGVFDFLEKAKAEGKIRNAGFSFHGSTEVFKEIVDAYPWDFV 171
Query: 182 QMEWSL--WTRDIEEEIIPLCRELGIGIVPYSPLGRG 216
Q++++ E + G+GI PL G
Sbjct: 172 QLQYNYIDQKNQAGTEGLKYAASKGLGIFIMEPLDGG 208
|
Length = 391 |
| >gnl|CDD|182140 PRK09912, PRK09912, L-glyceraldehyde 3-phosphate reductase; Provisional | Back alignment and domain information |
|---|
Score = 94.3 bits (234), Expect = 1e-22
Identities = 65/235 (27%), Positives = 120/235 (51%), Gaps = 28/235 (11%)
Query: 14 GTQGLEVSKLGYGCMNLSGGYSSPVSEEDGISMIKHAFSKGITFFDTADVYG--QNANEV 71
G GL + L G + + G+ + + + ++++ AF GIT FD A+ YG + E
Sbjct: 19 GKSGLRLPALSLGLWH-NFGHVNALESQR--AILRKAFDLGITHFDLANNYGPPPGSAEE 75
Query: 72 LLGKALKQ---LPREKIQVATKFGIA------GIGVAGVIVKGAPDYVRSCCEASLKRLD 122
G+ L++ R+++ ++TK G G G G+ Y+ + + SLKR+
Sbjct: 76 NFGRLLREDFAAYRDELIISTKAGYDMWPGPYGSG-------GSRKYLLASLDQSLKRMG 128
Query: 123 VDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPG-TIRRAHAVH----P 177
++Y+D++Y HRVD + P+EET + V+ GK Y+G+S SP T + + P
Sbjct: 129 LEYVDIFYSHRVDENTPMEETASALAHAVQSGKALYVGISSYSPERTQKMVELLREWKIP 188
Query: 178 ITAVQMEWSLWTRDIEEE-IIPLCRELGIGIVPYSPLGRGFFGGKAVVENVPADS 231
+ Q ++L R +++ ++ + G+G + ++PL +G GK + +P DS
Sbjct: 189 LLIHQPSYNLLNRWVDKSGLLDTLQNNGVGCIAFTPLAQGLLTGK-YLNGIPQDS 242
|
Length = 346 |
| >gnl|CDD|213602 TIGR01293, Kv_beta, voltage-dependent potassium channel beta subunit, animal | Back alignment and domain information |
|---|
Score = 91.5 bits (227), Expect = 1e-21
Identities = 69/218 (31%), Positives = 108/218 (49%), Gaps = 14/218 (6%)
Query: 13 LGTQGLEVSKLGYGCMNLSGGYSSPVSEEDGISMIKHAFSKGITFFDTADVYGQNANEVL 72
LG GL VS LG G + +S+E ++ A+ GI FDTA+VY EV+
Sbjct: 4 LGKSGLRVSCLGLGTWVT---FGGQISDEMAEQLLTLAYENGINLFDTAEVYAAGKAEVV 60
Query: 73 LGKALKQ--LPREKIQVATKFGIAGIGVAGVIVKGAPDYVRSCCEASLKRLDVDYIDLYY 130
LG LK+ R + TK I G A + ++ +ASL+RL ++Y+D+ +
Sbjct: 61 LGNILKKKGWRRSSYVITTK--IFWGGKAETERGLSRKHIIEGLKASLERLQLEYVDIVF 118
Query: 131 QHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPGTIRRAHAVH------PITAVQME 184
+R D + P+EET+ M ++ +G Y G S S I A++V P Q E
Sbjct: 119 ANRPDPNTPMEETVRAMTYVINQGMAMYWGTSRWSSMEIMEAYSVARQFNLIPPICEQAE 178
Query: 185 WSLWTRDIEEEIIP-LCRELGIGIVPYSPLGRGFFGGK 221
+ ++ R+ E +P L ++G+G + +SPL G GK
Sbjct: 179 YHMFQREKVEVQLPELYHKIGVGAMTWSPLACGLVSGK 216
|
This model describes the conserved core region of the beta subunit of voltage-gated potassium (Kv) channels in animals. Amino-terminal regions differ substantially, in part by alternative splicing, and are not included in the model. Four beta subunits form a complex with four alpha subunit cytoplasmic (T1) regions, and the structure of the complex is solved. The beta subunit belongs to a family of NAD(P)H-dependent aldo-keto reductases, binds NADPH, and couples voltage-gated channel activity to the redox potential of the cell. Plant beta subunits and their closely related bacterial homologs (in Deinococcus radiudurans, Xylella fastidiosa, etc.) appear more closely related to each other than to animal forms. However, the bacterial species lack convincing counterparts the Kv alpha subunit and the Kv beta homolog may serve as an enzyme. Cutoffs are set for this model such that yeast and plant forms and bacterial close homologs score between trusted and noise cutoffs. Length = 317 |
| >gnl|CDD|236727 PRK10625, tas, putative aldo-keto reductase; Provisional | Back alignment and domain information |
|---|
Score = 91.8 bits (228), Expect = 1e-21
Identities = 75/266 (28%), Positives = 114/266 (42%), Gaps = 43/266 (16%)
Query: 6 HQVPRVKLGTQGLEVSKLGYGCMNLSGGYSSPVSEEDGISMIKHAFSKGITFFDTADVY- 64
H++P LEVS LG G M + SE D + + +A ++GI D A++Y
Sbjct: 4 HRIPH-----SSLEVSTLGLGTMT----FGEQNSEADAHAQLDYAVAQGINLIDVAEMYP 54
Query: 65 ------GQNANEVLLGKALKQL-PREKIQVATKF-GIAGIGVAGVIVKGAPDY--VRSCC 114
Q E +G L + REK+ +A+K G + G+ A D +R
Sbjct: 55 VPPRPETQGLTETYIGNWLAKRGSREKLIIASKVSGPSRNNDKGIRPNQALDRKNIREAL 114
Query: 115 EASLKRLDVDYIDLY----------------YQHRVDT-SVPIEETIGEMKKLVEEGKIK 157
SLKRL DY+DLY Y +V + ET+ + + GKI+
Sbjct: 115 HDSLKRLQTDYLDLYQVHWPQRPTNCFGKLGYSWTDSAPAVSLLETLDALAEQQRAGKIR 174
Query: 158 YIGLSEASP-GTIR-----RAHAVHPITAVQMEWSLWTRDIEEEIIPLCRELGIGIVPYS 211
YIG+S + G +R H + I +Q +SL R E + + + G+ ++ YS
Sbjct: 175 YIGVSNETAFGVMRYLHLAEKHDLPRIVTIQNPYSLLNRSFEVGLAEVSQYEGVELLAYS 234
Query: 212 PLGRGFFGGKAVVENVPADSFLVLFS 237
L G GK + PA + LFS
Sbjct: 235 CLAFGTLTGKYLNGAKPAGARNTLFS 260
|
Length = 346 |
| >gnl|CDD|236676 PRK10376, PRK10376, putative oxidoreductase; Provisional | Back alignment and domain information |
|---|
Score = 79.6 bits (197), Expect = 2e-17
Identities = 66/209 (31%), Positives = 104/209 (49%), Gaps = 12/209 (5%)
Query: 17 GLEVSKLGYGCMNLSG-GYSSPVSEEDG-ISMIKHAFSKGITFFDTADVYGQNANEVLLG 74
G V++LGYG M L+G G P + D I++++ A + G+ DT+D YG + L+
Sbjct: 14 GRSVNRLGYGAMQLAGPGVFGPPKDRDAAIAVLREAVALGVNHIDTSDFYGPHVTNQLIR 73
Query: 75 KALKQLPREKIQVATKFGIAGIGVAGVIVKGAPDYVRSCCEASLKRLDVDYIDLYYQHRV 134
+AL P + V TK G + +P +R +L+ L +D +D+ R+
Sbjct: 74 EALHPYPDDLTIV-TKVGARRGEDGSWLPAFSPAELRRAVHDNLRNLGLDVLDVV-NLRL 131
Query: 135 --DTSVPIEETIGE-MKKLVE---EGKIKYIGLSEASPGTIRRAHAVHPITAVQMEWSLW 188
D P E +I E + L E +G +++IGLS +P + A + I VQ ++L
Sbjct: 132 MGDGHGPAEGSIEEPLTVLAELQRQGLVRHIGLSNVTPTQVAEARKIAEIVCVQNHYNLA 191
Query: 189 TRDIEEEIIPLCRELGIGIVPYSPLGRGF 217
R + I L R+ GI VP+ PLG GF
Sbjct: 192 HRADDALIDALARD-GIAYVPFFPLG-GF 218
|
Length = 290 |
| >gnl|CDD|183203 PRK11565, dkgA, 2,5-diketo-D-gluconate reductase A; Provisional | Back alignment and domain information |
|---|
Score = 59.7 bits (145), Expect = 1e-10
Identities = 45/140 (32%), Positives = 64/140 (45%), Gaps = 23/140 (16%)
Query: 38 VSEEDGISMIKHAFSKGITFFDTADVYGQNANEVLLGKALKQ--LPREKIQVATKFGIAG 95
S E+ I+ I A G DTA +Y NE +GKALK+ + RE++ + TK
Sbjct: 25 ASNEEVITAIHKALEVGYRSIDTAAIYK---NEEGVGKALKEASVAREELFITTK----- 76
Query: 96 IGVAGVIVKGAPDYVRSCCEASLKRLDVDYIDLYYQH----RVDTSVPIEETIGEMKKLV 151
+ R E SLK+L +DY+DLY H +D V E M +L
Sbjct: 77 ------LWNDDHKRPREALEESLKKLQLDYVDLYLMHWPVPAIDHYV---EAWKGMIELQ 127
Query: 152 EEGKIKYIGLSEASPGTIRR 171
+EG IK IG+ ++R
Sbjct: 128 KEGLIKSIGVCNFQIHHLQR 147
|
Length = 275 |
| >gnl|CDD|183012 PRK11172, dkgB, 2,5-diketo-D-gluconate reductase B; Provisional | Back alignment and domain information |
|---|
Score = 50.0 bits (120), Expect = 2e-07
Identities = 48/182 (26%), Positives = 84/182 (46%), Gaps = 25/182 (13%)
Query: 44 ISMIKHAFSKGITFFDTADVYGQNANEVLLGKALKQ--LPREKIQVATKFGIAGIGVAGV 101
I +K A G DTA +Y NE +G+A+ + +PR+++ + TK I +
Sbjct: 19 IDSVKTALELGYRAIDTAQIYD---NEAAVGQAIAESGVPRDELFITTKIWIDNL----- 70
Query: 102 IVKGAPDYVRSCCEASLKRLDVDYIDLYYQH--RVDTSVPIEETIGEMKKLVEEGKIKYI 159
A D + + SL++L DY+DL H + V +EE + + + ++G + I
Sbjct: 71 ----AKDKLIPSLKESLQKLRTDYVDLTLIHWPSPNDEVSVEEFMQALLEAKKQGLTREI 126
Query: 160 GLSEASPGTIRRAHAV---HPITAVQMEWS--LWTRDIEEEIIPLCRELGIGIVPYSPLG 214
G+S + +++A A I Q+E S L R +++ +E GI + Y L
Sbjct: 127 GISNFTIALMKQAIAAVGAENIATNQIELSPYLQNR----KVVAFAKEHGIHVTSYMTLA 182
Query: 215 RG 216
G
Sbjct: 183 YG 184
|
Length = 267 |
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 252 | |||
| COG0667 | 316 | Tas Predicted oxidoreductases (related to aryl-alc | 100.0 | |
| KOG1575 | 336 | consensus Voltage-gated shaker-like K+ channel, su | 100.0 | |
| COG0656 | 280 | ARA1 Aldo/keto reductases, related to diketogulona | 100.0 | |
| PRK09912 | 346 | L-glyceraldehyde 3-phosphate reductase; Provisiona | 100.0 | |
| TIGR01293 | 317 | Kv_beta voltage-dependent potassium channel beta s | 100.0 | |
| cd06660 | 285 | Aldo_ket_red Aldo-keto reductases (AKRs) are a sup | 100.0 | |
| PRK10625 | 346 | tas putative aldo-keto reductase; Provisional | 100.0 | |
| PLN02587 | 314 | L-galactose dehydrogenase | 100.0 | |
| KOG1577 | 300 | consensus Aldo/keto reductase family proteins [Gen | 100.0 | |
| PRK10376 | 290 | putative oxidoreductase; Provisional | 100.0 | |
| PF00248 | 283 | Aldo_ket_red: Aldo/keto reductase family; InterPro | 100.0 | |
| PRK14863 | 292 | bifunctional regulator KidO; Provisional | 100.0 | |
| PRK11172 | 267 | dkgB 2,5-diketo-D-gluconate reductase B; Provision | 100.0 | |
| COG4989 | 298 | Predicted oxidoreductase [General function predict | 100.0 | |
| PRK11565 | 275 | dkgA 2,5-diketo-D-gluconate reductase A; Provision | 100.0 | |
| KOG1576 | 342 | consensus Predicted oxidoreductase [Energy product | 100.0 | |
| COG1453 | 391 | Predicted oxidoreductases of the aldo/keto reducta | 100.0 | |
| KOG3023 | 285 | consensus Glutamate-cysteine ligase regulatory sub | 98.13 | |
| cd03319 | 316 | L-Ala-DL-Glu_epimerase L-Ala-D/L-Glu epimerase cat | 96.13 | |
| cd03316 | 357 | MR_like Mandelate racemase (MR)-like subfamily of | 93.91 | |
| cd03315 | 265 | MLE_like Muconate lactonizing enzyme (MLE) like su | 93.63 | |
| PRK08392 | 215 | hypothetical protein; Provisional | 92.43 | |
| PRK10550 | 312 | tRNA-dihydrouridine synthase C; Provisional | 91.81 | |
| TIGR02370 | 197 | pyl_corrinoid methyltransferase cognate corrinoid | 91.81 | |
| cd03174 | 265 | DRE_TIM_metallolyase DRE-TIM metallolyase superfam | 91.5 | |
| cd06543 | 294 | GH18_PF-ChiA-like PF-ChiA is an uncharacterized ch | 91.39 | |
| PF07021 | 193 | MetW: Methionine biosynthesis protein MetW; InterP | 90.85 | |
| cd02070 | 201 | corrinoid_protein_B12-BD B12 binding domain of cor | 90.44 | |
| TIGR01928 | 324 | menC_lowGC/arch o-succinylbenzoic acid (OSB) synth | 90.15 | |
| cd00308 | 229 | enolase_like Enolase-superfamily, characterized by | 89.52 | |
| cd03318 | 365 | MLE Muconate Lactonizing Enzyme (MLE), an homoocta | 89.39 | |
| cd03323 | 395 | D-glucarate_dehydratase D-Glucarate dehydratase (G | 88.49 | |
| cd03322 | 361 | rpsA The starvation sensing protein RpsA from E.co | 88.46 | |
| TIGR01502 | 408 | B_methylAsp_ase methylaspartate ammonia-lyase. Thi | 87.94 | |
| TIGR02534 | 368 | mucon_cyclo muconate and chloromuconate cycloisome | 87.0 | |
| PF04476 | 235 | DUF556: Protein of unknown function (DUF556); Inte | 86.51 | |
| PRK07945 | 335 | hypothetical protein; Provisional | 86.2 | |
| PRK13958 | 207 | N-(5'-phosphoribosyl)anthranilate isomerase; Provi | 85.01 | |
| PRK08609 | 570 | hypothetical protein; Provisional | 84.78 | |
| PRK13796 | 365 | GTPase YqeH; Provisional | 83.78 | |
| PRK05692 | 287 | hydroxymethylglutaryl-CoA lyase; Provisional | 83.19 | |
| PRK00164 | 331 | moaA molybdenum cofactor biosynthesis protein A; R | 83.18 | |
| PLN02428 | 349 | lipoic acid synthase | 82.36 | |
| cd03325 | 352 | D-galactonate_dehydratase D-galactonate dehydratas | 82.24 | |
| cd03321 | 355 | mandelate_racemase Mandelate racemase (MR) catalyz | 82.0 | |
| cd03327 | 341 | MR_like_2 Mandelate racemase (MR)-like subfamily o | 81.83 | |
| cd03314 | 369 | MAL Methylaspartate ammonia lyase (3-methylasparta | 81.72 | |
| PRK01222 | 210 | N-(5'-phosphoribosyl)anthranilate isomerase; Provi | 81.37 | |
| COG0135 | 208 | TrpF Phosphoribosylanthranilate isomerase [Amino a | 81.32 | |
| cd00739 | 257 | DHPS DHPS subgroup of Pterin binding enzymes. DHPS | 81.31 | |
| cd02069 | 213 | methionine_synthase_B12_BD B12 binding domain of m | 81.15 | |
| cd07943 | 263 | DRE_TIM_HOA 4-hydroxy-2-oxovalerate aldolase, N-te | 80.35 | |
| COG0635 | 416 | HemN Coproporphyrinogen III oxidase and related Fe | 80.09 |
| >COG0667 Tas Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-53 Score=373.66 Aligned_cols=216 Identities=46% Similarity=0.742 Sum_probs=196.5
Q ss_pred cCceecCCCCccccceeecccccCCCCCCCCCHHHHHHHHHHHHHCCCCEEeCcCCcCCCcHHHHHHHHHhcCC-CCCEE
Q 025500 8 VPRVKLGTQGLEVSKLGYGCMNLSGGYSSPVSEEDGISMIKHAFSKGITFFDTADVYGQNANEVLLGKALKQLP-REKIQ 86 (252)
Q Consensus 8 m~~~~lg~~g~~vs~lglG~~~~g~~~~~~~~~~~~~~~l~~A~~~Gin~~Dta~~Yg~g~se~~ig~~l~~~~-R~~~~ 86 (252)
|.+|+||++|++||+||||||.+|+.+.. .+++++.++|++|+++||||||||+.||.|.||+++|++|++.+ |++++
T Consensus 1 m~~r~lG~~gl~vs~lglG~~~~g~~~~~-~~~~~a~~il~~A~d~Gin~~DTA~~Yg~g~sE~ilG~~l~~~~~Rd~vv 79 (316)
T COG0667 1 MKYRRLGRSGLKVSPLGLGTMTLGGDTDD-EEEAEAIEILDAALDAGINFFDTADVYGDGRSEEILGEALKERGRRDKVV 79 (316)
T ss_pred CCceecCCCCceecceeeeccccCCCCCc-hhhhHHHHHHHHHHHcCCCEEECccccCCCchHHHHHHHHhccCCCCeEE
Confidence 78999999999999999999999975332 25567888999999999999999999999999999999999744 89999
Q ss_pred EEeccCccCCCCccc-ccCCChHHHHHHHHHHHHHcCCCcccEEEccCCCCCCCHHHHHHHHHHHHHcCCccEEEccCCC
Q 025500 87 VATKFGIAGIGVAGV-IVKGAPDYVRSCCEASLKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEAS 165 (252)
Q Consensus 87 i~tK~~~~~~~~~~~-~~~~~~~~i~~~~~~sL~~Lg~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~G~ir~iGvs~~~ 165 (252)
|+||++.....+... ..+.+++++.++++.||+|||+||||+|++|+||...+.++++++|.+|+++|+||+||+||++
T Consensus 80 IaTK~g~~~~~~~~~~~~~~s~~~i~~~v~~SL~RLgtd~IDl~~iH~~d~~~p~~e~~~aL~~l~~~G~ir~iG~S~~~ 159 (316)
T COG0667 80 IATKVGYRPGDPGPNGVFGLSRDHIRRAVEASLKRLGTDYIDLYQLHRPDPETPIEETLEALDELVREGKIRYIGVSNYS 159 (316)
T ss_pred EEEeeccCCCCCCCCccCCCCHHHHHHHHHHHHHHhCCCceeEEEeCCCCCCCCHHHHHHHHHHHHHcCCeeEEEecCCC
Confidence 999999876421111 3668999999999999999999999999999999989999999999999999999999999999
Q ss_pred HHHHHHHhhc-CCceEEeeecCccccchhhhHHHHHHHhCCeEEecccCccccCCCCCCC
Q 025500 166 PGTIRRAHAV-HPITAVQMEWSLWTRDIEEEIIPLCRELGIGIVPYSPLGRGFFGGKAVV 224 (252)
Q Consensus 166 ~~~l~~~~~~-~~~~~~q~~~~~~~~~~~~~l~~~~~~~gi~v~a~spl~~G~L~~~~~~ 224 (252)
.+++.++++. .+++++|.+||++++..+.+++++|+++||++++||||++|+|++++..
T Consensus 160 ~~~i~~a~~~~~~~~~~Q~~ynl~~R~~e~~l~~~~~~~gi~~~~~spla~G~Ltgk~~~ 219 (316)
T COG0667 160 AEQIAEALAVAAPIDSLQPEYNLLERDAEKELLPLCREEGIGLLAYSPLASGLLTGKYLP 219 (316)
T ss_pred HHHHHHHHHhcCCceeecccCccccccchhHHHHHHHHcCCeEEEecCccccccCCCcCC
Confidence 9999999998 5999999999999987777799999999999999999999999999765
|
|
| >KOG1575 consensus Voltage-gated shaker-like K+ channel, subunit beta/KCNAB [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-51 Score=353.30 Aligned_cols=225 Identities=47% Similarity=0.744 Sum_probs=202.6
Q ss_pred cccCceecCCCCccccceeecccccCCCCCCCCCHHHHHHHHHHHHHCCCCEEeCcCCcCCCcHHHHHHHHHhc--CCCC
Q 025500 6 HQVPRVKLGTQGLEVSKLGYGCMNLSGGYSSPVSEEDGISMIKHAFSKGITFFDTADVYGQNANEVLLGKALKQ--LPRE 83 (252)
Q Consensus 6 ~~m~~~~lg~~g~~vs~lglG~~~~g~~~~~~~~~~~~~~~l~~A~~~Gin~~Dta~~Yg~g~se~~ig~~l~~--~~R~ 83 (252)
..|+++++|++|++||++|||||.+.. |+...+++++.++|++|+++|+||||||++||+|.+|..+|+++++ .+|+
T Consensus 10 ~~~~~~~lg~~gl~Vs~lglG~m~~~~-~~~~~~~e~a~~~m~~a~e~Gin~fDtAe~Yg~~~~E~llg~~i~~~~~~R~ 88 (336)
T KOG1575|consen 10 LGMLRRKLGNSGLKVSPLGLGCMGWTT-FGGQIDKEEAFELLDHAYEAGINFFDTAEVYGNGQSEELLGEFIKSRGWRRD 88 (336)
T ss_pred hcceeeeccCCCceecceeecceeeec-cccCCCHHHHHHHHHHHHHcCCCEEehhhhcCCcccHHHHHHHHHhcCCcCC
Confidence 458999999999999999999974443 4444699999999999999999999999999999999999999998 7899
Q ss_pred CEEEEeccCccCCCCcccccCCChHHHHHHHHHHHHHcCCCcccEEEccCCCCCCCHHHHHHHHHHHHHcCCccEEEccC
Q 025500 84 KIQVATKFGIAGIGVAGVIVKGAPDYVRSCCEASLKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSE 163 (252)
Q Consensus 84 ~~~i~tK~~~~~~~~~~~~~~~~~~~i~~~~~~sL~~Lg~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~G~ir~iGvs~ 163 (252)
+++|+||++.... +......+..++.+.++.|++||+++|||+|++||+|...+++++|++|.+++++|+|++||+|+
T Consensus 89 ~vviaTK~~~~~~--~~~~~G~~~~~i~~~~~~s~~rl~~~~IDl~q~Hr~D~~~piee~m~aL~~lve~Gki~yiGlSe 166 (336)
T KOG1575|consen 89 KVVIATKFGFDYG--GETPRGLSRKHIIEGVRDSLRRLQTDYIDLLQVHRWDPMVPIEETMRALTDLVEQGKIRYWGLSE 166 (336)
T ss_pred cEEEEEEEeccCC--CcCCCCCcHHHHHHHHHHHHHhcCCCeeEEEEEcccCCCCCHHHHHHHHHHHHhcCceEEEEecc
Confidence 9999999998662 22355678999999999999999999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHhhcCC--ceEEeeecCccccchh-hhHHHHHHHhCCeEEecccCccccCCCCCC-CCCCCCCccc
Q 025500 164 ASPGTIRRAHAVHP--ITAVQMEWSLWTRDIE-EEIIPLCRELGIGIVPYSPLGRGFFGGKAV-VENVPADSFL 233 (252)
Q Consensus 164 ~~~~~l~~~~~~~~--~~~~q~~~~~~~~~~~-~~l~~~~~~~gi~v~a~spl~~G~L~~~~~-~~~~~~~~~~ 233 (252)
++.+++.+++...+ +.++|++||++.++.+ .++++.|++.||++++||||++|+|++++. .++.+.+...
T Consensus 167 ~sa~~I~~a~~~~~~p~~s~Q~eysl~~Rd~ee~~i~~~c~~~Gi~li~ysPL~~G~Ltgk~~~~e~~~~~~~~ 240 (336)
T KOG1575|consen 167 WSAEEIREAHAVAPIPIVAVQVEYSLLSRDKEERGIIPLCRELGIGLIAWSPLGRGLLTGKYKLGEDSRNGDKR 240 (336)
T ss_pred CCHHHHHHHHHhcCCCceEeeeechhhhcchhhhhHHHHHHHcCcceEEecccccceeccCccccccccccccc
Confidence 99999999998876 9999999999999854 679999999999999999999999999954 3555555543
|
|
| >COG0656 ARA1 Aldo/keto reductases, related to diketogulonate reductase [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.7e-50 Score=339.52 Aligned_cols=220 Identities=30% Similarity=0.489 Sum_probs=184.3
Q ss_pred cCceecCCCCccccceeecccccCCCCCCCCCHHHHHHHHHHHHHCCCCEEeCcCCcCCCcHHHHHHHHHhc--CCCCCE
Q 025500 8 VPRVKLGTQGLEVSKLGYGCMNLSGGYSSPVSEEDGISMIKHAFSKGITFFDTADVYGQNANEVLLGKALKQ--LPREKI 85 (252)
Q Consensus 8 m~~~~lg~~g~~vs~lglG~~~~g~~~~~~~~~~~~~~~l~~A~~~Gin~~Dta~~Yg~g~se~~ig~~l~~--~~R~~~ 85 (252)
+.+.++ ++|.+||.||||||++++ .+...+++.+|++.|+|+||||..|| +|+.+|+++++ ++|+++
T Consensus 3 ~~~~~l-~~g~~iP~iGlGt~~~~~-------~~~~~~av~~Al~~Gyr~IDTA~~Yg---nE~~VG~aI~~s~v~Reel 71 (280)
T COG0656 3 KTKVTL-NNGVEIPAIGLGTWQIGD-------DEWAVRAVRAALELGYRLIDTAEIYG---NEEEVGEAIKESGVPREEL 71 (280)
T ss_pred Cceeec-CCCCcccCcceEeeecCC-------chhHHHHHHHHHHhCcceEecHhHhc---CHHHHHHHHHhcCCCHHHe
Confidence 456677 678889999999999864 23389999999999999999999999 89999999998 899999
Q ss_pred EEEeccCccCCCCcccccCCChHHHHHHHHHHHHHcCCCcccEEEccCCCCC--CCHHHHHHHHHHHHHcCCccEEEccC
Q 025500 86 QVATKFGIAGIGVAGVIVKGAPDYVRSCCEASLKRLDVDYIDLYYQHRVDTS--VPIEETIGEMKKLVEEGKIKYIGLSE 163 (252)
Q Consensus 86 ~i~tK~~~~~~~~~~~~~~~~~~~i~~~~~~sL~~Lg~d~iDl~~lh~~~~~--~~~~~~~~~L~~l~~~G~ir~iGvs~ 163 (252)
||+||+|... .+++.+.+++++||+|||+||+|||++|||... ..+.++|++|++++++|+||+|||||
T Consensus 72 FittKvw~~~---------~~~~~~~~a~e~Sl~rLg~dyvDLyLiHwP~~~~~~~~~etw~alE~l~~~G~ir~IGVSN 142 (280)
T COG0656 72 FITTKVWPSD---------LGYDETLKALEASLKRLGLDYVDLYLIHWPVPNKYVVIEETWKALEELVDEGLIRAIGVSN 142 (280)
T ss_pred EEEeecCCcc---------CCcchHHHHHHHHHHHhCCCceeEEEECCCCCccCccHHHHHHHHHHHHhcCCccEEEeeC
Confidence 9999999765 468899999999999999999999999999752 23689999999999999999999999
Q ss_pred CCHHHHHHHhhc--CCceEEeeecCccccchhhhHHHHHHHhCCeEEecccCcccc-CCCCCC-------CCCCCCCccc
Q 025500 164 ASPGTIRRAHAV--HPITAVQMEWSLWTRDIEEEIIPLCRELGIGIVPYSPLGRGF-FGGKAV-------VENVPADSFL 233 (252)
Q Consensus 164 ~~~~~l~~~~~~--~~~~~~q~~~~~~~~~~~~~l~~~~~~~gi~v~a~spl~~G~-L~~~~~-------~~~~~~~~~~ 233 (252)
|+.++|+++++. ..|.++|++||++.+.. +++++|+++||.++|||||+.|. |..... ... .+.+.+
T Consensus 143 F~~~~L~~l~~~~~~~p~~NQIe~hp~~~q~--el~~~~~~~gI~v~AysPL~~g~~l~~~~~l~~Ia~k~g~-t~AQv~ 219 (280)
T COG0656 143 FGVEHLEELLSLAKVKPAVNQIEYHPYLRQP--ELLPFCQRHGIAVEAYSPLAKGGKLLDNPVLAEIAKKYGK-TPAQVA 219 (280)
T ss_pred CCHHHHHHHHHhcCCCCceEEEEeccCCCcH--HHHHHHHHcCCEEEEECCcccccccccChHHHHHHHHhCC-CHHHHH
Confidence 999999999876 45899999999999974 59999999999999999999654 444321 111 233333
Q ss_pred cccCC--ccccccCccccc
Q 025500 234 VLFSV--NVYPHHFVSSVS 250 (252)
Q Consensus 234 ~~~~~--~~~~~~~~~~~~ 250 (252)
+.|.. ..+++|-.++++
T Consensus 220 L~W~i~~gv~~Ipks~~~~ 238 (280)
T COG0656 220 LRWHIQRGVIVIPKSTTPE 238 (280)
T ss_pred HHHHHhCCcEEecCCCCHH
Confidence 43332 367777776654
|
|
| >PRK09912 L-glyceraldehyde 3-phosphate reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-48 Score=344.02 Aligned_cols=214 Identities=28% Similarity=0.513 Sum_probs=185.2
Q ss_pred cccCceecCCCCccccceeecccccCCCCCCCCCHHHHHHHHHHHHHCCCCEEeCcCCcCC--CcHHHHHHHHHhc---C
Q 025500 6 HQVPRVKLGTQGLEVSKLGYGCMNLSGGYSSPVSEEDGISMIKHAFSKGITFFDTADVYGQ--NANEVLLGKALKQ---L 80 (252)
Q Consensus 6 ~~m~~~~lg~~g~~vs~lglG~~~~g~~~~~~~~~~~~~~~l~~A~~~Gin~~Dta~~Yg~--g~se~~ig~~l~~---~ 80 (252)
..|++|+||++|++||+||||||+. +|...+.+++.+++++|+++|||+||||+.||+ |.+|+.+|++|+. .
T Consensus 11 ~~m~~r~lg~tg~~vs~lglG~~~~---~g~~~~~~~~~~~l~~A~~~Gin~~DTA~~YG~~~g~sE~~lG~~l~~~~~~ 87 (346)
T PRK09912 11 GQMQYRYCGKSGLRLPALSLGLWHN---FGHVNALESQRAILRKAFDLGITHFDLANNYGPPPGSAEENFGRLLREDFAA 87 (346)
T ss_pred CCcceeecCCCCcccccccccCccc---cCCCCCHHHHHHHHHHHHHCCCCEEEChhhhCCCCCCcHHHHHHHHHhcccC
Confidence 4589999999999999999999973 222336788899999999999999999999995 8999999999985 2
Q ss_pred CCCCEEEEeccCccCCCCcccccCCChHHHHHHHHHHHHHcCCCcccEEEccCCCCCCCHHHHHHHHHHHHHcCCccEEE
Q 025500 81 PREKIQVATKFGIAGIGVAGVIVKGAPDYVRSCCEASLKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIG 160 (252)
Q Consensus 81 ~R~~~~i~tK~~~~~~~~~~~~~~~~~~~i~~~~~~sL~~Lg~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~G~ir~iG 160 (252)
+|++++|+||++....+. ......+++.+++++++||+|||+||||+|++|+|+...+.+++|++|++|+++|+||+||
T Consensus 88 ~Rd~~~I~TK~g~~~~~~-~~~~~~s~~~i~~~~e~SL~rLg~d~iDl~~lH~~~~~~~~~e~~~al~~l~~~GkIr~iG 166 (346)
T PRK09912 88 YRDELIISTKAGYDMWPG-PYGSGGSRKYLLASLDQSLKRMGLEYVDIFYSHRVDENTPMEETASALAHAVQSGKALYVG 166 (346)
T ss_pred CCCeEEEEEEecccCCCC-cCCCCCCHHHHHHHHHHHHHHHCCCcEEEEEeCCCCCCCCHHHHHHHHHHHHHcCCeeEEE
Confidence 699999999997531111 1112357999999999999999999999999999988778999999999999999999999
Q ss_pred ccCCCHHHHHHHhhc-----CCceEEeeecCccccchh-hhHHHHHHHhCCeEEecccCccccCCCCCC
Q 025500 161 LSEASPGTIRRAHAV-----HPITAVQMEWSLWTRDIE-EEIIPLCRELGIGIVPYSPLGRGFFGGKAV 223 (252)
Q Consensus 161 vs~~~~~~l~~~~~~-----~~~~~~q~~~~~~~~~~~-~~l~~~~~~~gi~v~a~spl~~G~L~~~~~ 223 (252)
||||+.++++++.+. .++.++|++||++++..+ .+++++|+++||+|++|+||++|+|++++.
T Consensus 167 vSn~~~~~~~~~~~~~~~~~~~~~~~Q~~ynll~~~~~~~~ll~~~~~~gI~via~spl~~G~Lt~~~~ 235 (346)
T PRK09912 167 ISSYSPERTQKMVELLREWKIPLLIHQPSYNLLNRWVDKSGLLDTLQNNGVGCIAFTPLAQGLLTGKYL 235 (346)
T ss_pred ecCCCHHHHHHHHHHHHhcCCCcEEeeccCCceecccchhhHHHHHHHcCceEEEehhhcCccccCCCC
Confidence 999999988766542 367899999999998654 579999999999999999999999999853
|
|
| >TIGR01293 Kv_beta voltage-dependent potassium channel beta subunit, animal | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.9e-48 Score=339.40 Aligned_cols=210 Identities=32% Similarity=0.495 Sum_probs=183.7
Q ss_pred ceecCCCCccccceeecccccCCCCCCCCCHHHHHHHHHHHHHCCCCEEeCcCCcCCCcHHHHHHHHHhc--CCCCCEEE
Q 025500 10 RVKLGTQGLEVSKLGYGCMNLSGGYSSPVSEEDGISMIKHAFSKGITFFDTADVYGQNANEVLLGKALKQ--LPREKIQV 87 (252)
Q Consensus 10 ~~~lg~~g~~vs~lglG~~~~g~~~~~~~~~~~~~~~l~~A~~~Gin~~Dta~~Yg~g~se~~ig~~l~~--~~R~~~~i 87 (252)
||+||++|++||+||||||++++ ...+.+++.++++.|+++|||+||||+.||.|.||+.+|++|+. .+|++++|
T Consensus 1 ~r~lg~tg~~vs~lglGt~~~~g---~~~~~~~a~~~l~~al~~Gi~~~DTA~~Yg~g~sE~~lG~~l~~~~~~R~~~~i 77 (317)
T TIGR01293 1 YRNLGKSGLRVSCLGLGTWVTFG---GQISDEMAEQLLTLAYENGINLFDTAEVYAAGKAEVVLGNILKKKGWRRSSYVI 77 (317)
T ss_pred CcccCCCCCeecceeecCCccCC---CCCCHHHHHHHHHHHHHcCCCeEECccccCCCccHHHHHHHHHhcCCCcccEEE
Confidence 58899999999999999997432 23478899999999999999999999999999999999999985 46999999
Q ss_pred EeccCccCCCCcccccCCChHHHHHHHHHHHHHcCCCcccEEEccCCCCCCCHHHHHHHHHHHHHcCCccEEEccCCCHH
Q 025500 88 ATKFGIAGIGVAGVIVKGAPDYVRSCCEASLKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPG 167 (252)
Q Consensus 88 ~tK~~~~~~~~~~~~~~~~~~~i~~~~~~sL~~Lg~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~G~ir~iGvs~~~~~ 167 (252)
+||+++.... ...+..+++.+++++++||+|||+||||+|++|||+...+.+++|++|++|+++|+||+||+||++.+
T Consensus 78 aTK~~~~~~~--~~~~~~~~~~i~~~~~~SL~rL~td~iDl~~lH~~~~~~~~~e~~~aL~~l~~~G~ir~iGvSn~~~~ 155 (317)
T TIGR01293 78 TTKIFWGGKA--ETERGLSRKHIIEGLKASLERLQLEYVDIVFANRPDPNTPMEETVRAMTYVINQGMAMYWGTSRWSSM 155 (317)
T ss_pred EeeeccCCCC--CCCCCCCHHHHHHHHHHHHHHhCCCcEeEEEeccCCCCCCHHHHHHHHHHHHHcCCeeEEEecCCCHH
Confidence 9998643210 01234679999999999999999999999999999887788999999999999999999999999999
Q ss_pred HHHHHhhc------CCceEEeeecCccccch-hhhHHHHHHHhCCeEEecccCccccCCCCCCC
Q 025500 168 TIRRAHAV------HPITAVQMEWSLWTRDI-EEEIIPLCRELGIGIVPYSPLGRGFFGGKAVV 224 (252)
Q Consensus 168 ~l~~~~~~------~~~~~~q~~~~~~~~~~-~~~l~~~~~~~gi~v~a~spl~~G~L~~~~~~ 224 (252)
++.++... .+++++|++||++++.. +.+++++|+++||++++|+||++|+|++++..
T Consensus 156 ~l~~~~~~~~~~~~~~~~~~Q~~~~l~~r~~~e~~l~~~~~~~gi~v~a~spl~~G~Ltg~~~~ 219 (317)
T TIGR01293 156 EIMEAYSVARQFNLIPPICEQAEYHMFQREKVEVQLPELYHKIGVGAMTWSPLACGLVSGKYDS 219 (317)
T ss_pred HHHHHHHHHHHcCCCCcceeccccChHhcchhHHHHHHHHHHcCCeEEEeccccccccCCCCCC
Confidence 98776432 46789999999999874 56899999999999999999999999998643
|
Plant beta subunits and their closely related bacterial homologs (in Deinococcus radiudurans, Xylella fastidiosa, etc.) appear more closely related to each other than to animal forms. However, the bacterial species lack convincing counterparts the Kv alpha subunit and the Kv beta homolog may serve as an enzyme. Cutoffs are set for this model such that yeast and plant forms and bacterial close homologs score between trusted and noise cutoffs. |
| >cd06660 Aldo_ket_red Aldo-keto reductases (AKRs) are a superfamily of soluble NAD(P)(H) oxidoreductases whose chief purpose is to reduce aldehydes and ketones to primary and secondary alcohols | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-47 Score=331.63 Aligned_cols=207 Identities=46% Similarity=0.744 Sum_probs=189.0
Q ss_pred ceecCCCCccccceeecccccCCCCCCCCCHHHHHHHHHHHHHCCCCEEeCcCCcCCCcHHHHHHHHHhcCC-CCCEEEE
Q 025500 10 RVKLGTQGLEVSKLGYGCMNLSGGYSSPVSEEDGISMIKHAFSKGITFFDTADVYGQNANEVLLGKALKQLP-REKIQVA 88 (252)
Q Consensus 10 ~~~lg~~g~~vs~lglG~~~~g~~~~~~~~~~~~~~~l~~A~~~Gin~~Dta~~Yg~g~se~~ig~~l~~~~-R~~~~i~ 88 (252)
+|+||++|++||+||||||.++..+ .+.+++.+++++|++.|||+||||+.||+|.+|+.+|++|+..+ |++++|+
T Consensus 1 ~r~lg~tg~~vs~lg~G~~~~~~~~---~~~~~~~~~l~~A~~~Gi~~iDTA~~Yg~g~sE~~lG~al~~~~~R~~~~i~ 77 (285)
T cd06660 1 YRTLGKTGLKVSRLGLGTWQLGGGY---VDEEEAAAAVRAALDAGINFIDTADVYGDGESEELLGEALKERGPREEVFIA 77 (285)
T ss_pred CcccCCCCceecCcceeccccCCCC---CCHHHHHHHHHHHHHcCCCeEECccccCCCCCHHHHHHHHhccCCcCcEEEE
Confidence 5789999999999999999988654 37899999999999999999999999999999999999999854 9999999
Q ss_pred eccCccCCCCcccccCCChHHHHHHHHHHHHHcCCCcccEEEccCCCCCCC-HHHHHHHHHHHHHcCCccEEEccCCCHH
Q 025500 89 TKFGIAGIGVAGVIVKGAPDYVRSCCEASLKRLDVDYIDLYYQHRVDTSVP-IEETIGEMKKLVEEGKIKYIGLSEASPG 167 (252)
Q Consensus 89 tK~~~~~~~~~~~~~~~~~~~i~~~~~~sL~~Lg~d~iDl~~lh~~~~~~~-~~~~~~~L~~l~~~G~ir~iGvs~~~~~ 167 (252)
||++..... .++.+++.+++++++||++|++||||+|++|+|+.... ..++|++|++++++|+||+||+||++.+
T Consensus 78 tK~~~~~~~----~~~~~~~~~~~~l~~sL~~L~~~~iDl~~lh~~~~~~~~~~~~~~~l~~l~~~G~ir~iGvS~~~~~ 153 (285)
T cd06660 78 TKVGPRPGD----GRDLSPEHIRRAVEESLKRLGTDYIDLYLLHWPDPDTPDIEETLRALEELVKEGKIRAIGVSNFSAE 153 (285)
T ss_pred eeecCCCCC----CCCCCHHHHHHHHHHHHHHhCCCceeEEEecCCCCCCCCHHHHHHHHHHHHHcCCccEEEeeCCCHH
Confidence 999865421 14568999999999999999999999999999987665 8899999999999999999999999999
Q ss_pred HHHHHhhc--CCceEEeeecCccccchhhhHHHHHHHhCCeEEecccCccccCCCCCC
Q 025500 168 TIRRAHAV--HPITAVQMEWSLWTRDIEEEIIPLCRELGIGIVPYSPLGRGFFGGKAV 223 (252)
Q Consensus 168 ~l~~~~~~--~~~~~~q~~~~~~~~~~~~~l~~~~~~~gi~v~a~spl~~G~L~~~~~ 223 (252)
.++++... .+|+++|++||++++..+.+++++|+++||+|++|+||++|.|++++.
T Consensus 154 ~l~~~~~~~~~~~~~~q~~~n~~~~~~~~~~~~~~~~~gi~v~~~~~l~~g~l~~~~~ 211 (285)
T cd06660 154 QLEEALAAAGVPPAVNQVEYNLLDRQAEEELLPYCREHGIGVIAYSPLAGGLLTGKYL 211 (285)
T ss_pred HHHHHHHhhCCCceEEecccCcccCchHHHHHHHHHHcCcEEEEeccccCceecCCCC
Confidence 99999887 799999999999999865579999999999999999999999987754
|
AKRs are present in all phyla and are of importance to both health and industrial applications. Members have very distinct functions and include the prokaryotic 2,5-diketo-D-gluconic acid reductases and beta-keto ester reductases, the eukaryotic aldose reductases, aldehyde reductases, hydroxysteroid dehydrogenases, steroid 5beta-reductases, potassium channel beta-subunits and aflatoxin aldehyde reductases, among others. |
| >PRK10625 tas putative aldo-keto reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-47 Score=338.96 Aligned_cols=213 Identities=29% Similarity=0.416 Sum_probs=182.6
Q ss_pred cCceecCCCCccccceeecccccCCCCCCCCCHHHHHHHHHHHHHCCCCEEeCcCCcC-------CCcHHHHHHHHHhc-
Q 025500 8 VPRVKLGTQGLEVSKLGYGCMNLSGGYSSPVSEEDGISMIKHAFSKGITFFDTADVYG-------QNANEVLLGKALKQ- 79 (252)
Q Consensus 8 m~~~~lg~~g~~vs~lglG~~~~g~~~~~~~~~~~~~~~l~~A~~~Gin~~Dta~~Yg-------~g~se~~ig~~l~~- 79 (252)
|++|+||++|+.||+||||||++|. ..+.+++.++++.|++.|||+||||+.|| .|.+|+.+|++|+.
T Consensus 1 m~~r~lg~t~~~vs~iglGt~~~g~----~~~~~~a~~~l~~al~~Gi~~~DTA~~Yg~~~~~~~~g~sE~~iG~aL~~~ 76 (346)
T PRK10625 1 MQYHRIPHSSLEVSTLGLGTMTFGE----QNSEADAHAQLDYAVAQGINLIDVAEMYPVPPRPETQGLTETYIGNWLAKR 76 (346)
T ss_pred CCceecCCCCCccccEeEeccccCC----CCCHHHHHHHHHHHHHcCCCEEECccccCCCcCCCCCCchHHHHHHHHhhc
Confidence 6789999999999999999999874 23688999999999999999999999998 48899999999985
Q ss_pred CCCCCEEEEeccCccCCCCcc---cccCCChHHHHHHHHHHHHHcCCCcccEEEccCCCC-----------------CCC
Q 025500 80 LPREKIQVATKFGIAGIGVAG---VIVKGAPDYVRSCCEASLKRLDVDYIDLYYQHRVDT-----------------SVP 139 (252)
Q Consensus 80 ~~R~~~~i~tK~~~~~~~~~~---~~~~~~~~~i~~~~~~sL~~Lg~d~iDl~~lh~~~~-----------------~~~ 139 (252)
.+|++++|+||++........ .....+++.+++++++||+|||+||||+|++|||+. ..+
T Consensus 77 ~~R~~v~i~TK~~~~~~~~~~~~~~~~~~s~~~i~~~~e~SL~rL~~d~iDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~ 156 (346)
T PRK10625 77 GSREKLIIASKVSGPSRNNDKGIRPNQALDRKNIREALHDSLKRLQTDYLDLYQVHWPQRPTNCFGKLGYSWTDSAPAVS 156 (346)
T ss_pred CCcceEEEEcccccCCcCCCCCcCCCCCCCHHHHHHHHHHHHHHhCCCeEeEEEeeccCcccccccccccccccccCCCC
Confidence 469999999998642110000 012468999999999999999999999999999964 235
Q ss_pred HHHHHHHHHHHHHcCCccEEEccCCCHHHHHHHhhc------CCceEEeeecCccccchhhhHHHHHHHhCCeEEecccC
Q 025500 140 IEETIGEMKKLVEEGKIKYIGLSEASPGTIRRAHAV------HPITAVQMEWSLWTRDIEEEIIPLCRELGIGIVPYSPL 213 (252)
Q Consensus 140 ~~~~~~~L~~l~~~G~ir~iGvs~~~~~~l~~~~~~------~~~~~~q~~~~~~~~~~~~~l~~~~~~~gi~v~a~spl 213 (252)
+.++|++|++|+++|+||+||+|||+.++++++... ..+.++|++||++++..+.+++++|+++||++++|+||
T Consensus 157 ~~e~~~aL~~l~~~GkIr~iGvSn~~~~~l~~~~~~~~~~~~~~~~~~q~~y~l~~r~~~~~ll~~~~~~gi~via~spL 236 (346)
T PRK10625 157 LLETLDALAEQQRAGKIRYIGVSNETAFGVMRYLHLAEKHDLPRIVTIQNPYSLLNRSFEVGLAEVSQYEGVELLAYSCL 236 (346)
T ss_pred HHHHHHHHHHHHHCCCeEEEEecCCCHHHHHHHHHHHHHcCCCCcEEecCCCCcccccchhHHHHHHHHcCCeEEEeccc
Confidence 789999999999999999999999999988776431 35788999999999876678999999999999999999
Q ss_pred ccccCCCCCCC
Q 025500 214 GRGFFGGKAVV 224 (252)
Q Consensus 214 ~~G~L~~~~~~ 224 (252)
++|+|++++..
T Consensus 237 ~~G~Ltg~~~~ 247 (346)
T PRK10625 237 AFGTLTGKYLN 247 (346)
T ss_pred cCeeccCCCCC
Confidence 99999998543
|
|
| >PLN02587 L-galactose dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-47 Score=336.29 Aligned_cols=206 Identities=34% Similarity=0.576 Sum_probs=178.2
Q ss_pred ceecCCCCccccceeecccccCCCCCCCCCHHHHHHHHHHHHHCCCCEEeCcCCcCCCcHHHHHHHHHhc--CCCCCEEE
Q 025500 10 RVKLGTQGLEVSKLGYGCMNLSGGYSSPVSEEDGISMIKHAFSKGITFFDTADVYGQNANEVLLGKALKQ--LPREKIQV 87 (252)
Q Consensus 10 ~~~lg~~g~~vs~lglG~~~~g~~~~~~~~~~~~~~~l~~A~~~Gin~~Dta~~Yg~g~se~~ig~~l~~--~~R~~~~i 87 (252)
||+||+||++||+||||||++|+.|+. .+.+++.+++++|++.|||+||||+.||.|.+|+.+|++|+. .+|++++|
T Consensus 1 ~r~lg~t~~~vs~lglG~~~~g~~~~~-~~~~~~~~~l~~A~~~Gin~~DTA~~Yg~g~sE~~lG~al~~~~~~R~~v~I 79 (314)
T PLN02587 1 LRELGSTGLKVSSVGFGASPLGSVFGP-VSEEDAIASVREAFRLGINFFDTSPYYGGTLSEKVLGKALKALGIPREKYVV 79 (314)
T ss_pred CCcCCCCCCcccCcccccccccCCCCC-CCHHHHHHHHHHHHHcCCCEEECcCccCCCchHHHHHHHHHhCCCCcceEEE
Confidence 688999999999999999999876654 478999999999999999999999999999999999999997 47999999
Q ss_pred EeccCccCCCCcccccCCChHHHHHHHHHHHHHcCCCcccEEEccCCCCC---CCHHHHHHHHHHHHHcCCccEEEccCC
Q 025500 88 ATKFGIAGIGVAGVIVKGAPDYVRSCCEASLKRLDVDYIDLYYQHRVDTS---VPIEETIGEMKKLVEEGKIKYIGLSEA 164 (252)
Q Consensus 88 ~tK~~~~~~~~~~~~~~~~~~~i~~~~~~sL~~Lg~d~iDl~~lh~~~~~---~~~~~~~~~L~~l~~~G~ir~iGvs~~ 164 (252)
+||++.... ..+.+++.+++++++||+|||+||||+|++|+|+.. ..++++|++|++|+++|+||+||+||+
T Consensus 80 ~TK~~~~~~-----~~~~~~~~i~~~~e~SL~rL~~d~iDl~~lH~~~~~~~~~~~~~~~~~l~~l~~~Gkir~iGvSn~ 154 (314)
T PLN02587 80 STKCGRYGE-----GFDFSAERVTKSVDESLARLQLDYVDILHCHDIEFGSLDQIVNETIPALQKLKESGKVRFIGITGL 154 (314)
T ss_pred EeccccCCC-----CCCCCHHHHHHHHHHHHHHhCCCCeeEEEecCCCCcchhhhHHHHHHHHHHHHHCCCeEEEEecCC
Confidence 999984321 124679999999999999999999999999999642 245689999999999999999999999
Q ss_pred CHHHHHHHhhc---C--CceEEeeecCccccchhhhHHHHHHHhCCeEEecccCccccCCCCC
Q 025500 165 SPGTIRRAHAV---H--PITAVQMEWSLWTRDIEEEIIPLCRELGIGIVPYSPLGRGFFGGKA 222 (252)
Q Consensus 165 ~~~~l~~~~~~---~--~~~~~q~~~~~~~~~~~~~l~~~~~~~gi~v~a~spl~~G~L~~~~ 222 (252)
+.++++.+... . .+..+|+.||+.++.. .+++++|+++||++++|+||++|+|+++.
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~ll~~~~~~gi~v~a~spl~~G~L~~~~ 216 (314)
T PLN02587 155 PLAIFTYVLDRVPPGTVDVILSYCHYSLNDSSL-EDLLPYLKSKGVGVISASPLAMGLLTENG 216 (314)
T ss_pred CHHHHHHHHHhhhcCCCCeEEeccccCcchhhH-HHHHHHHHHcCceEEEechhhccccCCCC
Confidence 99988776643 2 2333567888876543 58999999999999999999999999874
|
|
| >KOG1577 consensus Aldo/keto reductase family proteins [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-46 Score=316.37 Aligned_cols=186 Identities=32% Similarity=0.490 Sum_probs=171.3
Q ss_pred ceecCCCCccccceeecccccCCCCCCCCCHHHHHHHHHHHHHCCCCEEeCcCCcCCCcHHHHHHHHHhc------CCCC
Q 025500 10 RVKLGTQGLEVSKLGYGCMNLSGGYSSPVSEEDGISMIKHAFSKGITFFDTADVYGQNANEVLLGKALKQ------LPRE 83 (252)
Q Consensus 10 ~~~lg~~g~~vs~lglG~~~~g~~~~~~~~~~~~~~~l~~A~~~Gin~~Dta~~Yg~g~se~~ig~~l~~------~~R~ 83 (252)
.++| ++|.+||.||||||+. ++.+...+++.|++.|+||||||..|+ +|+.+|++|++ ++|+
T Consensus 6 ~~~L-n~G~~mP~iGlGTw~~--------~~~~~~~aV~~Al~~GYRHIDtA~~Y~---NE~evG~aik~~i~~~~v~Re 73 (300)
T KOG1577|consen 6 TVKL-NNGFKMPIIGLGTWQS--------PPGQVAEAVKAAIKAGYRHIDTAHVYG---NEKEVGEAIKELLAEGGVKRE 73 (300)
T ss_pred eEec-cCCCccceeeeEeccc--------ChhhHHHHHHHHHHhCcceeechhhhC---ChHHHHHHHHHHhhhCCcchh
Confidence 6788 9999999999999983 678999999999999999999999999 89999999995 7999
Q ss_pred CEEEEeccCccCCCCcccccCCChHHHHHHHHHHHHHcCCCcccEEEccCCCCC----------------CCHHHHHHHH
Q 025500 84 KIQVATKFGIAGIGVAGVIVKGAPDYVRSCCEASLKRLDVDYIDLYYQHRVDTS----------------VPIEETIGEM 147 (252)
Q Consensus 84 ~~~i~tK~~~~~~~~~~~~~~~~~~~i~~~~~~sL~~Lg~d~iDl~~lh~~~~~----------------~~~~~~~~~L 147 (252)
++||+||+|... +.++.++.++++||++||+||+|+|++|||-.. .+..++|++|
T Consensus 74 diFiTSKlw~~~---------~~~~~v~~al~~sLk~L~ldYvDLyLiH~P~~~k~~~~~~~~~~~~~~~~~~~~tW~am 144 (300)
T KOG1577|consen 74 DIFITSKLWPTD---------HAPELVEKALEKSLKKLQLDYVDLYLIHWPVAFKDSFPKDENGKVNYDDVDRIETWKAM 144 (300)
T ss_pred hheeeeccCccc---------cChhhHHHHHHHHHHHhChhhhheeeEecccccCCCCCcccccccccccchHHHHHHHH
Confidence 999999999765 568999999999999999999999999999553 3467899999
Q ss_pred HHHHHcCCccEEEccCCCHHHHHHHhhc--CCceEEeeecCccccchhhhHHHHHHHhCCeEEecccCccccC
Q 025500 148 KKLVEEGKIKYIGLSEASPGTIRRAHAV--HPITAVQMEWSLWTRDIEEEIIPLCRELGIGIVPYSPLGRGFF 218 (252)
Q Consensus 148 ~~l~~~G~ir~iGvs~~~~~~l~~~~~~--~~~~~~q~~~~~~~~~~~~~l~~~~~~~gi~v~a~spl~~G~L 218 (252)
+++++.|++|+||||||+..+|++++.. .+|.++|+++|++.+. .+++++|+++||.|.|||||+.+.-
T Consensus 145 E~~~~~Gl~rsIGVSNF~~~~le~ll~~~ki~P~vnQvE~HP~~~Q--~~L~~fCk~~~I~v~AYSpLg~~~~ 215 (300)
T KOG1577|consen 145 EKLVDEGLVRSIGVSNFNIKQLEELLNLAKIKPAVNQVECHPYLQQ--KKLVEFCKSKGIVVTAYSPLGSPGR 215 (300)
T ss_pred HHHHHcCCceEeeeecCCHHHHHHHHhcCCCCCccceeeccCCcCh--HHHHHHHhhCCcEEEEecCCCCCCC
Confidence 9999999999999999999999999876 6799999999998884 7899999999999999999998754
|
|
| >PRK10376 putative oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-44 Score=311.05 Aligned_cols=207 Identities=27% Similarity=0.459 Sum_probs=177.7
Q ss_pred cccCceecCCCCccccceeecccccCC--CCCCCCCHHHHHHHHHHHHHCCCCEEeCcCCcCCCcHHHHHHHHHhcCCCC
Q 025500 6 HQVPRVKLGTQGLEVSKLGYGCMNLSG--GYSSPVSEEDGISMIKHAFSKGITFFDTADVYGQNANEVLLGKALKQLPRE 83 (252)
Q Consensus 6 ~~m~~~~lg~~g~~vs~lglG~~~~g~--~~~~~~~~~~~~~~l~~A~~~Gin~~Dta~~Yg~g~se~~ig~~l~~~~R~ 83 (252)
|+-.+++|+ |++||+||||||++|+ .||...+++++.++++.|++.|||+||||+.||+|.+|+.+|++++ ..|+
T Consensus 5 ~~~~~~~l~--g~~vs~iglG~~~lg~~~~~g~~~~~~~~~~~l~~A~~~Gin~~DTA~~Yg~~~sE~~lg~~l~-~~R~ 81 (290)
T PRK10376 5 MSSGTFTLG--GRSVNRLGYGAMQLAGPGVFGPPKDRDAAIAVLREAVALGVNHIDTSDFYGPHVTNQLIREALH-PYPD 81 (290)
T ss_pred ccCCceecC--CeeecccceeccccCCCCcCCCCCCHHHHHHHHHHHHHcCCCeEEChhhcCCCcHHHHHHHHHh-cCCC
Confidence 445566774 9999999999999985 2565557889999999999999999999999999999999999997 3699
Q ss_pred CEEEEeccCccCCCCcccccCCChHHHHHHHHHHHHHcCCCcccEEEccCCCC-----CCCHHHHHHHHHHHHHcCCccE
Q 025500 84 KIQVATKFGIAGIGVAGVIVKGAPDYVRSCCEASLKRLDVDYIDLYYQHRVDT-----SVPIEETIGEMKKLVEEGKIKY 158 (252)
Q Consensus 84 ~~~i~tK~~~~~~~~~~~~~~~~~~~i~~~~~~sL~~Lg~d~iDl~~lh~~~~-----~~~~~~~~~~L~~l~~~G~ir~ 158 (252)
+++|+||++.............+++.+++++++||+|||+||||+|++|+++. ..+..++|++|++|+++||||+
T Consensus 82 ~~~i~TK~g~~~~~~~~~~~~~~~~~i~~~~e~SL~rL~td~iDl~~~H~~~~~h~p~~~~~~~~~~~l~~l~~~Gkir~ 161 (290)
T PRK10376 82 DLTIVTKVGARRGEDGSWLPAFSPAELRRAVHDNLRNLGLDVLDVVNLRLMGDGHGPAEGSIEEPLTVLAELQRQGLVRH 161 (290)
T ss_pred eEEEEeeecccCCCCCccCCCCCHHHHHHHHHHHHHHhCCCeEEEEEEeccCCCCCCCCCCHHHHHHHHHHHHHCCceeE
Confidence 99999998753211111223467999999999999999999999999887421 2347889999999999999999
Q ss_pred EEccCCCHHHHHHHhhcCCceEEeeecCccccchhhhHHHHHHHhCCeEEecccCccc
Q 025500 159 IGLSEASPGTIRRAHAVHPITAVQMEWSLWTRDIEEEIIPLCRELGIGIVPYSPLGRG 216 (252)
Q Consensus 159 iGvs~~~~~~l~~~~~~~~~~~~q~~~~~~~~~~~~~l~~~~~~~gi~v~a~spl~~G 216 (252)
||||||+.++++++.+..+++++|++||++++.. .+++++|+++||++++|+||+++
T Consensus 162 iGvSn~~~~~l~~~~~~~~~~~~q~~~~~~~~~~-~~~~~~~~~~gi~v~a~~pL~g~ 218 (290)
T PRK10376 162 IGLSNVTPTQVAEARKIAEIVCVQNHYNLAHRAD-DALIDALARDGIAYVPFFPLGGF 218 (290)
T ss_pred EEecCCCHHHHHHHHhhCCeEEEecccCCCcCCh-HHHHHHHHHcCCEEEEeecCCCC
Confidence 9999999999999988888999999999998763 67999999999999999999854
|
|
| >PF00248 Aldo_ket_red: Aldo/keto reductase family; InterPro: IPR023210 The aldo-keto reductase family includes a number of related monomeric NADPH-dependent oxidoreductases, such as aldehyde reductase, aldose reductase, prostaglandin F synthase, xylose reductase, rho crystallin, and many others [] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-44 Score=311.23 Aligned_cols=196 Identities=40% Similarity=0.653 Sum_probs=171.8
Q ss_pred ceeecccccCCCCCCCCCHHHHHHHHHHHHHCCCCEEeCcCCcCCCcHHHHHHHHHhc--CCCCCEEEEeccCccCCCCc
Q 025500 22 KLGYGCMNLSGGYSSPVSEEDGISMIKHAFSKGITFFDTADVYGQNANEVLLGKALKQ--LPREKIQVATKFGIAGIGVA 99 (252)
Q Consensus 22 ~lglG~~~~g~~~~~~~~~~~~~~~l~~A~~~Gin~~Dta~~Yg~g~se~~ig~~l~~--~~R~~~~i~tK~~~~~~~~~ 99 (252)
+||||||++++. ..+.+++.++++.|++.|||+||||+.||+|.+|+.+|++|+. .+|++++|+||+... .
T Consensus 1 ~l~lG~~~~~~~---~~~~~~~~~~l~~a~~~Gin~~DtA~~Y~~g~sE~~lg~~l~~~~~~r~~~~i~tK~~~~----~ 73 (283)
T PF00248_consen 1 PLGLGTWRLGGE---RVSEEEAEAILRRALEAGINFFDTADSYGNGRSERILGRALRKSRVPRDDIFISTKVYGD----G 73 (283)
T ss_dssp SBEEECTTBTTT---TSTHHHHHHHHHHHHHTT--EEEECGGGGGGTHHHHHHHHHHHTSSTGGGSEEEEEEESS----S
T ss_pred CEEEEccccCCC---CCCHHHHHHHHHHHHHcCCCeecccccccccccccccccccccccccccccccccccccc----c
Confidence 589999999863 4589999999999999999999999999988999999999998 799999999999221 1
Q ss_pred ccccCCChHHHHHHHHHHHHHcCCCcccEEEccCCCCCCC-HHHHHHHHHHHHHcCCccEEEccCCCHHHHHHH--hhcC
Q 025500 100 GVIVKGAPDYVRSCCEASLKRLDVDYIDLYYQHRVDTSVP-IEETIGEMKKLVEEGKIKYIGLSEASPGTIRRA--HAVH 176 (252)
Q Consensus 100 ~~~~~~~~~~i~~~~~~sL~~Lg~d~iDl~~lh~~~~~~~-~~~~~~~L~~l~~~G~ir~iGvs~~~~~~l~~~--~~~~ 176 (252)
......+++.+++++++||++||+||+|+|++|+|+.... ..++|++|++|+++|+||+||||||+++.++++ ....
T Consensus 74 ~~~~~~~~~~i~~~~~~sL~~L~~d~iDl~~lH~~~~~~~~~~~~~~~l~~l~~~G~ir~iGvs~~~~~~l~~~~~~~~~ 153 (283)
T PF00248_consen 74 KPEPDYSPDSIRESLERSLERLGTDYIDLLLLHWPDPSEDALEEVWEALEELKKEGKIRHIGVSNFSPEQLEAALKIGSI 153 (283)
T ss_dssp STGGGSSHHHHHHHHHHHHHHHTSSSEEEEEESSSSTTSSHHHHHHHHHHHHHHTTSEEEEEEES--HHHHHHHHTCTSS
T ss_pred cccccccccccccccccccccccccchhccccccccccccccchhhhhhhhccccccccccccccccccccccccccccc
Confidence 2345678999999999999999999999999999999888 899999999999999999999999999999999 5557
Q ss_pred CceEEeeecCccccchhhhHHHHHHHhCCeEEecccCccccCCCCCCC
Q 025500 177 PITAVQMEWSLWTRDIEEEIIPLCRELGIGIVPYSPLGRGFFGGKAVV 224 (252)
Q Consensus 177 ~~~~~q~~~~~~~~~~~~~l~~~~~~~gi~v~a~spl~~G~L~~~~~~ 224 (252)
+|+++|++||++++....+++++|+++||++++|+||++|.|++++..
T Consensus 154 ~~~~~q~~~n~~~~~~~~~l~~~~~~~gi~v~a~~~l~~G~l~~~~~~ 201 (283)
T PF00248_consen 154 PPDVVQINYNLLNRREEEGLLEFCREHGIGVIAYSPLAGGLLTGKYKS 201 (283)
T ss_dssp -ESEEEEE-BTTBHBGGHHHHHHHHHTT-EEEEESTTGGGCGGTTTTT
T ss_pred cccccccccccccccccccccccccccccccccccccccCcccccccc
Confidence 899999999999766668999999999999999999999999988543
|
All possess a similar structure, with a beta-alpha-beta fold characteristic of nucleotide binding proteins []. The fold comprises a parallel beta-8/alpha-8-barrel, which contains a novel NADP-binding motif. The binding site is located in a large, deep, elliptical pocket in the C-terminal end of the beta sheet, the substrate being bound in an extended conformation. The hydrophobic nature of the pocket favours aromatic and apolar substrates over highly polar ones []. Binding of the NADPH coenzyme causes a massive conformational change, reorienting a loop, effectively locking the coenzyme in place. This binding is more similar to FAD- than to NAD(P)-binding oxidoreductases []. Some proteins of this entry contain a K+ ion channel beta chain regulatory domain; these are reported to have oxidoreductase activity []. This entry represents the NADP-dependent oxidoreductase domain found in these proteins.; PDB: 1C9W_A 4F40_B 1VBJ_A 1XGD_A 1X97_A 2ACS_A 1EF3_A 2ACU_A 1PWM_A 2NVD_A .... |
| >PRK14863 bifunctional regulator KidO; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-44 Score=313.77 Aligned_cols=191 Identities=19% Similarity=0.254 Sum_probs=168.0
Q ss_pred CccccceeecccccCCC-------CCCCCCHHHHHHHHHHHHHCCCCEEeCcCCcCCCcHHHHHHHHHhcCCCCCEEEEe
Q 025500 17 GLEVSKLGYGCMNLSGG-------YSSPVSEEDGISMIKHAFSKGITFFDTADVYGQNANEVLLGKALKQLPREKIQVAT 89 (252)
Q Consensus 17 g~~vs~lglG~~~~g~~-------~~~~~~~~~~~~~l~~A~~~Gin~~Dta~~Yg~g~se~~ig~~l~~~~R~~~~i~t 89 (252)
+++||+||||||++|+. |+. ++++++.++++.|++.||||||||+.|| .+|+.+|++|+...+++++|+|
T Consensus 2 ~~~vs~iglGt~~~g~~~~~~~~~~~~-~~~~ea~~~l~~A~~~Gin~~DTA~~YG--~SE~~lG~al~~~~~~~~~i~t 78 (292)
T PRK14863 2 SSPVSKLGLAAAQFGLDPGSSSAPRGR-TPEAEARDILNIAARAGLSVLDASGLFG--RAETVLGQLIPRPVPFRVTLST 78 (292)
T ss_pred CCcceeeeeeeeccCCCcccccCCCCC-CCHHHHHHHHHHHHHcCCCEEecchhhh--hHHHHHhhhhccCCceEeeccc
Confidence 57899999999999864 343 5899999999999999999999999997 5999999999843346788888
Q ss_pred ccCccCCCCcccccCCChHHHHHHHHHHHHHcCCCcccEEEccCCCCC-CCH-HHHHHHHHHHHHcCCccEEEccCCCHH
Q 025500 90 KFGIAGIGVAGVIVKGAPDYVRSCCEASLKRLDVDYIDLYYQHRVDTS-VPI-EETIGEMKKLVEEGKIKYIGLSEASPG 167 (252)
Q Consensus 90 K~~~~~~~~~~~~~~~~~~~i~~~~~~sL~~Lg~d~iDl~~lh~~~~~-~~~-~~~~~~L~~l~~~G~ir~iGvs~~~~~ 167 (252)
|.. +.+++.+++++++||+|||+||||+|++|+|+.. .+. +++|++|++|+++|+||+|||||++++
T Consensus 79 k~~-----------~~~~~~i~~~~e~SL~rLg~d~iDl~~lH~~~~~~~~~~~~~~~~l~~l~~~Gkir~iGvSn~~~~ 147 (292)
T PRK14863 79 VRA-----------DRGPDFVEAEARASLRRMGVERADAILVHSPTELFGPHGAALWERLQALKDQGLFAKIGVSAHASD 147 (292)
T ss_pred ccc-----------cccHHHHHHHHHHHHHHhCCCccCeEEEeCchhhcCcchHHHHHHHHHHHHcCCcceEeeeccCHH
Confidence 842 1358999999999999999999999999999753 223 578999999999999999999999999
Q ss_pred HHHHHhhcCCceEEeeecCccccchh-hhHHHHHHHhCCeEEecccCccccCCCC
Q 025500 168 TIRRAHAVHPITAVQMEWSLWTRDIE-EEIIPLCRELGIGIVPYSPLGRGFFGGK 221 (252)
Q Consensus 168 ~l~~~~~~~~~~~~q~~~~~~~~~~~-~~l~~~~~~~gi~v~a~spl~~G~L~~~ 221 (252)
++.++....+|+++|++||++++..+ .+++++|+++||++++|+||++|+|++.
T Consensus 148 ~~~~~~~~~~~~~~Q~~~n~l~~~~~~~~~l~~~~~~gi~v~a~spl~~G~L~~~ 202 (292)
T PRK14863 148 DPVGVARRFKPDILQAPASLLDQRLLADGSLQRIAGMGVEVHLRSIFLNGLLFLP 202 (292)
T ss_pred HHHHHHhcCCCCEEEecCCcccccccccchHHHHHhCCCEEEEechhhCccccCC
Confidence 99888877899999999999998654 5799999999999999999999999864
|
|
| >PRK11172 dkgB 2,5-diketo-D-gluconate reductase B; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.4e-43 Score=300.97 Aligned_cols=181 Identities=27% Similarity=0.453 Sum_probs=162.3
Q ss_pred ccccceeecccccCCCCCCCCCHHHHHHHHHHHHHCCCCEEeCcCCcCCCcHHHHHHHHHhc--CCCCCEEEEeccCccC
Q 025500 18 LEVSKLGYGCMNLSGGYSSPVSEEDGISMIKHAFSKGITFFDTADVYGQNANEVLLGKALKQ--LPREKIQVATKFGIAG 95 (252)
Q Consensus 18 ~~vs~lglG~~~~g~~~~~~~~~~~~~~~l~~A~~~Gin~~Dta~~Yg~g~se~~ig~~l~~--~~R~~~~i~tK~~~~~ 95 (252)
++||+||||||+++ .+++.+++++|++.|||+||||+.|| +|+.+|++|+. .+|+++||+||++..
T Consensus 1 ~~vs~lglGt~~~~--------~~~~~~~i~~A~~~Gi~~~DTA~~Yg---~E~~lG~al~~~~~~R~~v~i~TK~~~~- 68 (267)
T PRK11172 1 MSIPAFGLGTFRLK--------DQVVIDSVKTALELGYRAIDTAQIYD---NEAAVGQAIAESGVPRDELFITTKIWID- 68 (267)
T ss_pred CCCCCEeeEccccC--------hHHHHHHHHHHHHcCCCEEEccchhC---CHHHHHHHHHHcCCChhHeEEEEEeCCC-
Confidence 36999999999863 47799999999999999999999999 69999999985 579999999998532
Q ss_pred CCCcccccCCChHHHHHHHHHHHHHcCCCcccEEEccCCCCC--CCHHHHHHHHHHHHHcCCccEEEccCCCHHHHHHHh
Q 025500 96 IGVAGVIVKGAPDYVRSCCEASLKRLDVDYIDLYYQHRVDTS--VPIEETIGEMKKLVEEGKIKYIGLSEASPGTIRRAH 173 (252)
Q Consensus 96 ~~~~~~~~~~~~~~i~~~~~~sL~~Lg~d~iDl~~lh~~~~~--~~~~~~~~~L~~l~~~G~ir~iGvs~~~~~~l~~~~ 173 (252)
..+++.+++++++||+|||+||+|+|++|+|+.. .+..++|++|++++++|+||+||||||+.++++++.
T Consensus 69 --------~~~~~~~~~~~~~SL~rL~~d~iDl~~lH~~~~~~~~~~~~~~~~l~~l~~~Gkir~iGvSn~~~~~l~~~~ 140 (267)
T PRK11172 69 --------NLAKDKLIPSLKESLQKLRTDYVDLTLIHWPSPNDEVSVEEFMQALLEAKKQGLTREIGISNFTIALMKQAI 140 (267)
T ss_pred --------CCCHHHHHHHHHHHHHHhCCCceEEEEeCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEccCCHHHHHHHH
Confidence 2568999999999999999999999999999653 467899999999999999999999999999999887
Q ss_pred hc---CCceEEeeecCccccchhhhHHHHHHHhCCeEEecccCccccCCC
Q 025500 174 AV---HPITAVQMEWSLWTRDIEEEIIPLCRELGIGIVPYSPLGRGFFGG 220 (252)
Q Consensus 174 ~~---~~~~~~q~~~~~~~~~~~~~l~~~~~~~gi~v~a~spl~~G~L~~ 220 (252)
+. .+++++|++||++++. .+++++|+++||+|++|+||++|.+..
T Consensus 141 ~~~~~~~~~~~Q~~~~~~~~~--~~ll~~~~~~gi~v~a~spl~~G~~~~ 188 (267)
T PRK11172 141 AAVGAENIATNQIELSPYLQN--RKVVAFAKEHGIHVTSYMTLAYGKVLK 188 (267)
T ss_pred HhcCCCCCeEEeeecCCCCCc--HHHHHHHHHCCCEEEEECCCCCCcccC
Confidence 64 3689999999999874 689999999999999999999997654
|
|
| >COG4989 Predicted oxidoreductase [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-43 Score=290.04 Aligned_cols=239 Identities=28% Similarity=0.381 Sum_probs=207.6
Q ss_pred cCceecCCCCccccceeecccccCCCCCCCCCHHHHHHHHHHHHHCCCCEEeCcCCcCCCcHHHHHHHHHhc--CCCCCE
Q 025500 8 VPRVKLGTQGLEVSKLGYGCMNLSGGYSSPVSEEDGISMIKHAFSKGITFFDTADVYGQNANEVLLGKALKQ--LPREKI 85 (252)
Q Consensus 8 m~~~~lg~~g~~vs~lglG~~~~g~~~~~~~~~~~~~~~l~~A~~~Gin~~Dta~~Yg~g~se~~ig~~l~~--~~R~~~ 85 (252)
|++..+++.|+.+|++.+|+|++.. |+. ..++....++.|++.|||+||.|+.||.|+.|+.+|.+|+- ..|+++
T Consensus 1 m~rI~l~~~~~e~Sriv~G~wRl~d-~~~--~~~e~~~~Ie~~le~Gitt~DhADIYGgy~cE~~fg~aL~l~p~lReki 77 (298)
T COG4989 1 MQRITLAPDGLEFSRIVLGYWRLND-WNM--SARELLSFIETALELGITTFDHADIYGGYQCEALFGEALKLAPGLREKI 77 (298)
T ss_pred CceEEecCCCccHHHHHHHHHhhhh-ccC--CHHHHHHHHHHHHHcCcccchhhhhcCCccHHHHHHHHHhcChhhhhhe
Confidence 6788999999999999999999975 543 56899999999999999999999999999999999999996 569999
Q ss_pred EEEeccCccCCCC---cccccCCChHHHHHHHHHHHHHcCCCcccEEEccCCCCCCCHHHHHHHHHHHHHcCCccEEEcc
Q 025500 86 QVATKFGIAGIGV---AGVIVKGAPDYVRSCCEASLKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLS 162 (252)
Q Consensus 86 ~i~tK~~~~~~~~---~~~~~~~~~~~i~~~~~~sL~~Lg~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~G~ir~iGvs 162 (252)
.|.||.+...... ....++.|.++|..++++||.||++||+|++++|+||+-.+.+++.+|+..|+++||||++|||
T Consensus 78 eivsKCGI~~~s~~~~~~~hydts~~HI~~SVe~SL~~L~tDylD~LLiHRPDpLmd~eeVAeAf~~L~~sGKVr~fGVS 157 (298)
T COG4989 78 EIVSKCGIRLPSREEPRIGHYDTSKEHIIKSVEQSLINLKTDYLDLLLIHRPDPLMDAEEVAEAFTHLHKSGKVRHFGVS 157 (298)
T ss_pred EeeeccccccccccccccccccCcHHHHHHHHHHHHHHhccchhhhhhccCCcccCCHHHHHHHHHHHHhcCCeeeeecC
Confidence 9999999765321 1235688999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCHHHHHHHhhc--CCceEEeeecCccccchh-hhHHHHHHHhCCeEEecccCccccCCCCC-C---------------
Q 025500 163 EASPGTIRRAHAV--HPITAVQMEWSLWTRDIE-EEIIPLCRELGIGIVPYSPLGRGFFGGKA-V--------------- 223 (252)
Q Consensus 163 ~~~~~~l~~~~~~--~~~~~~q~~~~~~~~~~~-~~l~~~~~~~gi~v~a~spl~~G~L~~~~-~--------------- 223 (252)
||++.+++-+... .++.+||+++|+++.+.- .+.+++|+++.|.+++||||++|.++... .
T Consensus 158 Nf~p~Q~~LL~s~l~~~LvtNQlelS~~~~~~~~DGtLd~~q~~~v~pmaWSpl~gG~~F~g~~~~q~l~~~l~~ia~e~ 237 (298)
T COG4989 158 NFNPAQFELLQSRLPFTLVTNQLELSPLHTPMLLDGTLDYCQQLRVRPMAWSPLGGGGLFLGDDKFQRLRKVLDRIAEEY 237 (298)
T ss_pred CCCHHHHHHHHHhccchhhhcceeeccccccccccchHHHHHHcCCCcccccccCCCccccCCcchHHHHHHHHHHHHHh
Confidence 9999999888776 457999999999998744 77999999999999999999999666531 1
Q ss_pred ---CCCCCCCccccccCCccccccCcccc
Q 025500 224 ---VENVPADSFLVLFSVNVYPHHFVSSV 249 (252)
Q Consensus 224 ---~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (252)
....-.-.|++++++...|+=|+.++
T Consensus 238 ga~s~~~VaiAWllR~Pa~~~PiiGt~~~ 266 (298)
T COG4989 238 GAVSITAVAIAWLLRHPAKPQPIIGTGNL 266 (298)
T ss_pred CcccHHHHHHHHHHhCcCcccceecCCCH
Confidence 00111346888999888888888765
|
|
| >PRK11565 dkgA 2,5-diketo-D-gluconate reductase A; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-41 Score=291.16 Aligned_cols=182 Identities=31% Similarity=0.399 Sum_probs=163.3
Q ss_pred eecCCCCccccceeecccccCCCCCCCCCHHHHHHHHHHHHHCCCCEEeCcCCcCCCcHHHHHHHHHhc--CCCCCEEEE
Q 025500 11 VKLGTQGLEVSKLGYGCMNLSGGYSSPVSEEDGISMIKHAFSKGITFFDTADVYGQNANEVLLGKALKQ--LPREKIQVA 88 (252)
Q Consensus 11 ~~lg~~g~~vs~lglG~~~~g~~~~~~~~~~~~~~~l~~A~~~Gin~~Dta~~Yg~g~se~~ig~~l~~--~~R~~~~i~ 88 (252)
..| ++|+.||+||||||++ +.+++.+++++|++.|+|+||||+.|| +|+.+|++|+. .+|++++|+
T Consensus 7 ~~l-~~g~~v~~lglG~~~~--------~~~~~~~~l~~A~~~Gi~~~DTA~~Yg---~E~~lG~al~~~~~~R~~~~i~ 74 (275)
T PRK11565 7 IKL-QDGNVMPQLGLGVWQA--------SNEEVITAIHKALEVGYRSIDTAAIYK---NEEGVGKALKEASVAREELFIT 74 (275)
T ss_pred EEc-CCCCccCCcceECccC--------CHHHHHHHHHHHHHhCCCEEEchhhhC---CHHHHHHHHHHcCCCHHHEEEE
Confidence 557 8999999999999975 468899999999999999999999998 79999999986 469999999
Q ss_pred eccCccCCCCcccccCCChHHHHHHHHHHHHHcCCCcccEEEccCCCCCC-CHHHHHHHHHHHHHcCCccEEEccCCCHH
Q 025500 89 TKFGIAGIGVAGVIVKGAPDYVRSCCEASLKRLDVDYIDLYYQHRVDTSV-PIEETIGEMKKLVEEGKIKYIGLSEASPG 167 (252)
Q Consensus 89 tK~~~~~~~~~~~~~~~~~~~i~~~~~~sL~~Lg~d~iDl~~lh~~~~~~-~~~~~~~~L~~l~~~G~ir~iGvs~~~~~ 167 (252)
||++. .+++.+++++++||+|||+||+|+|++|+|+... +..++|++|++|+++|+||+|||||++.+
T Consensus 75 tK~~~-----------~~~~~~~~~~~~sL~rL~~d~iDl~~lH~p~~~~~~~~~~~~~l~~l~~~G~ir~iGvSn~~~~ 143 (275)
T PRK11565 75 TKLWN-----------DDHKRPREALEESLKKLQLDYVDLYLMHWPVPAIDHYVEAWKGMIELQKEGLIKSIGVCNFQIH 143 (275)
T ss_pred EEecC-----------cchHHHHHHHHHHHHHhCCCceEEEEecCCCCCcCcHHHHHHHHHHHHHcCCeeEEeeccCCHH
Confidence 99863 2467899999999999999999999999997643 46799999999999999999999999999
Q ss_pred HHHHHhhc--CCceEEeeecCccccchhhhHHHHHHHhCCeEEecccCcccc
Q 025500 168 TIRRAHAV--HPITAVQMEWSLWTRDIEEEIIPLCRELGIGIVPYSPLGRGF 217 (252)
Q Consensus 168 ~l~~~~~~--~~~~~~q~~~~~~~~~~~~~l~~~~~~~gi~v~a~spl~~G~ 217 (252)
+++++... ..+.++|++|+++.+. .+++++|+++||.+++|+||++|.
T Consensus 144 ~l~~~~~~~~v~~~~~Q~~~~~~~~~--~~~~~~~~~~~i~~~a~spl~~G~ 193 (275)
T PRK11565 144 HLQRLIDETGVTPVINQIELHPLMQQ--RQLHAWNATHKIQTESWSPLAQGG 193 (275)
T ss_pred HHHHHHHhCCCCceeeeeecCCccch--HHHHHHHHHCCCEEEEEccCCCCC
Confidence 99988754 3578999999998874 679999999999999999999773
|
|
| >KOG1576 consensus Predicted oxidoreductase [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.5e-42 Score=281.25 Aligned_cols=226 Identities=30% Similarity=0.471 Sum_probs=196.9
Q ss_pred cCceecCCCCccccceeecccccCCCCCCCCCHHHHHHHHHHHHHCCCCEEeCcCCcCCCcHHHHHHHHHhcCCCCCEEE
Q 025500 8 VPRVKLGTQGLEVSKLGYGCMNLSGGYSSPVSEEDGISMIKHAFSKGITFFDTADVYGQNANEVLLGKALKQLPREKIQV 87 (252)
Q Consensus 8 m~~~~lg~~g~~vs~lglG~~~~g~~~~~~~~~~~~~~~l~~A~~~Gin~~Dta~~Yg~g~se~~ig~~l~~~~R~~~~i 87 (252)
|.+|.+|+||++||+||||+..++..|+.. ++++....+..|++.|||+|||++.||.+++|+.+|.+++++||+.++|
T Consensus 22 meyR~lg~tgl~VSk~~fGga~L~~~fgd~-~~e~~i~tv~eA~k~GINyiDTsp~Ygqs~se~~lg~al~~vPR~aYyI 100 (342)
T KOG1576|consen 22 MEYRQLGSTGLRVSKLGFGGAALGQLFGDE-DEEEGILTVIEAFKSGINYIDTSPYYGQSRSEEGLGLALKDVPREAYYI 100 (342)
T ss_pred HHHhhcCCCcceeeeeeecchhhhhhcCCc-chhhhHHHHHHHHHccccceecCcccCcchhHHHHHHHHhhCChhheee
Confidence 889999999999999999999999988874 7888888788899999999999999999999999999999999999999
Q ss_pred EeccCccCCCCcccccCCChHHHHHHHHHHHHHcCCCcccEEEccCCCCC----CCHHHHHHHHHHHHHcCCccEEEccC
Q 025500 88 ATKFGIAGIGVAGVIVKGAPDYVRSCCEASLKRLDVDYIDLYYQHRVDTS----VPIEETIGEMKKLVEEGKIKYIGLSE 163 (252)
Q Consensus 88 ~tK~~~~~~~~~~~~~~~~~~~i~~~~~~sL~~Lg~d~iDl~~lh~~~~~----~~~~~~~~~L~~l~~~G~ir~iGvs~ 163 (252)
+||++..... ....++++++.+++++++||+||++||+|++++|..+.. ..+.|++.+|+++|++||+|+||++.
T Consensus 101 aTKvgRy~ld-~~~~FdfsadkvreSv~rSlerLqldyvDilqiHDvefap~ld~vl~Etlp~Le~lk~~Gk~RfiGitg 179 (342)
T KOG1576|consen 101 ATKVGRYELD-YANMFDFSADKVRESVKRSLERLQLDYVDILQIHDVEFAPNLDIVLNETLPALEELKQEGKIRFIGITG 179 (342)
T ss_pred eeeeeecccC-ccccccchHHHHHHHHHHHHHHhCCceeEEEEeecccccccccHHHHHHHHHHHHHHhcCceeEeeecc
Confidence 9999975532 234578999999999999999999999999999998764 23678999999999999999999999
Q ss_pred CCHHHHHHHhhc--CCceEEe--eecCccccchhhhHHHHHHHhCCeEEecccCccccCCCCCCCCCCCCCcccccc
Q 025500 164 ASPGTIRRAHAV--HPITAVQ--MEWSLWTRDIEEEIIPLCRELGIGIVPYSPLGRGFFGGKAVVENVPADSFLVLF 236 (252)
Q Consensus 164 ~~~~~l~~~~~~--~~~~~~q--~~~~~~~~~~~~~l~~~~~~~gi~v~a~spl~~G~L~~~~~~~~~~~~~~~~~~ 236 (252)
++.+.+.++++. +.++++- ..|++.+.. .-..+++.+.+|++|+.-++++.|+|+++-.+.+.|+.+-++..
T Consensus 180 ypldvl~~~ae~~~G~~dvvlsY~ry~l~d~t-Ll~~~~~~~sk~vgVi~AsalsmgLLt~~gp~~wHPaS~Elk~~ 255 (342)
T KOG1576|consen 180 YPLDVLTECAERGKGRLDVVLSYCRYTLNDNT-LLRYLKRLKSKGVGVINASALSMGLLTNQGPPPWHPASDELKEA 255 (342)
T ss_pred cchHHHHHHHhcCCCceeeehhhhhhccccHH-HHHHHHHHHhcCceEEehhhHHHHHhhcCCCCCCCCCCHHHHHH
Confidence 999999999876 3456555 455555443 25677888999999999999999999999888899887666543
|
|
| >COG1453 Predicted oxidoreductases of the aldo/keto reductase family [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-41 Score=290.83 Aligned_cols=231 Identities=27% Similarity=0.364 Sum_probs=198.7
Q ss_pred cCceecCCCCccccceeecccccCCCCCCCCCHHHHHHHHHHHHHCCCCEEeCcCCcCCCcHHHHHHHHHhcCCCCCEEE
Q 025500 8 VPRVKLGTQGLEVSKLGYGCMNLSGGYSSPVSEEDGISMIKHAFSKGITFFDTADVYGQNANEVLLGKALKQLPREKIQV 87 (252)
Q Consensus 8 m~~~~lg~~g~~vs~lglG~~~~g~~~~~~~~~~~~~~~l~~A~~~Gin~~Dta~~Yg~g~se~~ig~~l~~~~R~~~~i 87 (252)
|.||++|+||.++|.+|||||++...+....|.+.+.+++++|++.|||+||||..|..|.||..+|++|....|++|.+
T Consensus 1 Mlyr~~~k~g~~~s~lgfG~MRlp~~~~~~id~~~~~~~i~~aie~GiNyidTA~~Yh~g~sE~~lgkaL~~~~Rekv~L 80 (391)
T COG1453 1 MLYRKFPKTGDELSILGFGCMRLPLKEQGSIDEENANETIDYAIEHGINYIDTAWPYHGGESEEFLGKALKDGYREKVKL 80 (391)
T ss_pred CchhhcCCCCcccceeccceeecccccCCCccHHHHHHHHHHHHHcCCceEeecccccCCCchHHHHHHhhhcccceEEE
Confidence 78999999999999999999999876655568999999999999999999999999987889999999999988999999
Q ss_pred EeccCccCCCCcccccCCChHHHHHHHHHHHHHcCCCcccEEEccCCCCCCCHH-----HHHHHHHHHHHcCCccEEEcc
Q 025500 88 ATKFGIAGIGVAGVIVKGAPDYVRSCCEASLKRLDVDYIDLYYQHRVDTSVPIE-----ETIGEMKKLVEEGKIKYIGLS 162 (252)
Q Consensus 88 ~tK~~~~~~~~~~~~~~~~~~~i~~~~~~sL~~Lg~d~iDl~~lh~~~~~~~~~-----~~~~~L~~l~~~G~ir~iGvs 162 (252)
+||+..... -+++.+++-++++|++|++||+|+|+||..+. ..++ +.++.+++++++|+||++|+|
T Consensus 81 aTKlp~~~~--------~~~edm~r~fneqLekl~~Dy~D~yliH~l~~-e~~~k~~~~g~~df~~kak~eGkIr~~GFS 151 (391)
T COG1453 81 ATKLPSWPV--------KDREDMERIFNEQLEKLGTDYIDYYLIHGLNT-ETWEKIERLGVFDFLEKAKAEGKIRNAGFS 151 (391)
T ss_pred EeecCCccc--------cCHHHHHHHHHHHHHHhCCchhhhhhhccccH-HHHHHHHccChHHHHHHHHhcCcEEEeeec
Confidence 999986442 36899999999999999999999999999976 3322 368999999999999999999
Q ss_pred CCCH-HHHHHHhhcCCceEEeeecCccccchh--hhHHHHHHHhCCeEEecccCccccCCCCCC----------CCCCCC
Q 025500 163 EASP-GTIRRAHAVHPITAVQMEWSLWTRDIE--EEIIPLCRELGIGIVPYSPLGRGFFGGKAV----------VENVPA 229 (252)
Q Consensus 163 ~~~~-~~l~~~~~~~~~~~~q~~~~~~~~~~~--~~l~~~~~~~gi~v~a~spl~~G~L~~~~~----------~~~~~~ 229 (252)
.|+. +.+++++...+++++|++||.++.... .+.+++|+++|++|+.++|+.+|-|..+.. ...-.|
T Consensus 152 fHgs~e~~~~iv~a~~~dfvqlq~ny~d~~n~~~~~~l~~A~~~~~gI~IMeP~~gG~l~~~vP~~~~~l~~~~~~~~sP 231 (391)
T COG1453 152 FHGSTEVFKEIVDAYPWDFVQLQYNYIDQKNQAGTEGLKYAASKGLGIFIMEPLDGGGLLYNVPEKLEELCRPASPKRSP 231 (391)
T ss_pred CCCCHHHHHHHHhcCCcceEEeeeeeeccchhcccHHHHHHHhCCCcEEEEeeCCCCCcccCCCHHHHHHHHhcCCCCCc
Confidence 9875 679999999999999999999998744 489999999999999999999998887421 111113
Q ss_pred CccccccCCccccccCccccc
Q 025500 230 DSFLVLFSVNVYPHHFVSSVS 250 (252)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~~~ 250 (252)
.+|.. +++.++|.|++|+
T Consensus 232 ~~wa~---R~~~shp~V~~vl 249 (391)
T COG1453 232 AEWAL---RYLLSHPEVTTVL 249 (391)
T ss_pred HHHHH---HHHhcCCCeEEEe
Confidence 34433 3458888888775
|
|
| >KOG3023 consensus Glutamate-cysteine ligase regulatory subunit [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.13 E-value=7e-06 Score=67.79 Aligned_cols=78 Identities=15% Similarity=0.195 Sum_probs=64.1
Q ss_pred HHHHHHHHHHHHHcCCccEEEccCCCHHHHHHHhhc--CCceEEeeecCccccchhhhHHHHHHHhCCeEEecccCcccc
Q 025500 140 IEETIGEMKKLVEEGKIKYIGLSEASPGTIRRAHAV--HPITAVQMEWSLWTRDIEEEIIPLCRELGIGIVPYSPLGRGF 217 (252)
Q Consensus 140 ~~~~~~~L~~l~~~G~ir~iGvs~~~~~~l~~~~~~--~~~~~~q~~~~~~~~~~~~~l~~~~~~~gi~v~a~spl~~G~ 217 (252)
+.+.|..||+++..|+|..||+|.|+..+|++++.. ..|..+|+++.-...- .+++.+||.++.|.+...+=-. -+
T Consensus 155 lkplwk~LE~lv~~~kI~~lGvSDfda~qLe~Li~saqVvP~snqVnL~~cCvv-PpdLqafa~~hdiQLltHsDP~-~l 232 (285)
T KOG3023|consen 155 LKPLWKLLEELVGEGKIGTLGVSDFDANQLERLISSAQVVPESNQVNLGQCCVV-PPDLQAFADRHDIQLLTHSDPS-AL 232 (285)
T ss_pred HHHHHHHHHHHhccCceeeeeecccCHHHHHHHHhhhccccccceeeccccccC-CHHHHHHhhhcceeeeecCCch-hc
Confidence 457899999999999999999999999999999887 4578888876655543 2799999999999999876433 34
Q ss_pred CC
Q 025500 218 FG 219 (252)
Q Consensus 218 L~ 219 (252)
|+
T Consensus 233 ls 234 (285)
T KOG3023|consen 233 LS 234 (285)
T ss_pred CC
Confidence 44
|
|
| >cd03319 L-Ala-DL-Glu_epimerase L-Ala-D/L-Glu epimerase catalyzes the epimerization of L-Ala-D/L-Glu and other dipeptides | Back alignment and domain information |
|---|
Probab=96.13 E-value=0.27 Score=43.17 Aligned_cols=156 Identities=11% Similarity=0.059 Sum_probs=99.3
Q ss_pred CHHHHHHHHHHHHHCCCCEEeCcCCcCCCcHHHHHHHHHhc-CCCCCEEEEeccCccCCCCcccccCCChHHHHHHHHHH
Q 025500 39 SEEDGISMIKHAFSKGITFFDTADVYGQNANEVLLGKALKQ-LPREKIQVATKFGIAGIGVAGVIVKGAPDYVRSCCEAS 117 (252)
Q Consensus 39 ~~~~~~~~l~~A~~~Gin~~Dta~~Yg~g~se~~ig~~l~~-~~R~~~~i~tK~~~~~~~~~~~~~~~~~~~i~~~~~~s 117 (252)
+.++..+.++.+.+.|++.|..--.-......+.+ +++++ .+ ++-|.-+.... ++.+.. ..+-+.
T Consensus 134 ~~~~~~~~~~~~~~~Gf~~iKik~g~~~~~d~~~v-~~lr~~~g--~~~l~vD~n~~----------~~~~~A-~~~~~~ 199 (316)
T cd03319 134 TPEAMAAAAKKAAKRGFPLLKIKLGGDLEDDIERI-RAIREAAP--DARLRVDANQG----------WTPEEA-VELLRE 199 (316)
T ss_pred CHHHHHHHHHHHHHcCCCEEEEEeCCChhhHHHHH-HHHHHhCC--CCeEEEeCCCC----------cCHHHH-HHHHHH
Confidence 56778888899999999999974311111122333 34444 33 56666666432 334332 233344
Q ss_pred HHHcCCCcccEEEccCCCCCCCHHHHHHHHHHHHHcCCcc-EEEccCCCHHHHHHHhhcCCceEEeeecCccccch-hhh
Q 025500 118 LKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIK-YIGLSEASPGTIRRAHAVHPITAVQMEWSLWTRDI-EEE 195 (252)
Q Consensus 118 L~~Lg~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~G~ir-~iGvs~~~~~~l~~~~~~~~~~~~q~~~~~~~~~~-~~~ 195 (252)
|+..+ +.++..|-.. +-++.+.++++.-.+. ..|=+-++.+.+.++++....+++|+..+..-.-. -..
T Consensus 200 l~~~~-----l~~iEeP~~~----~d~~~~~~L~~~~~ipIa~~E~~~~~~~~~~~~~~~~~d~v~~~~~~~GGi~~~~~ 270 (316)
T cd03319 200 LAELG-----VELIEQPVPA----GDDDGLAYLRDKSPLPIMADESCFSAADAARLAGGGAYDGINIKLMKTGGLTEALR 270 (316)
T ss_pred HHhcC-----CCEEECCCCC----CCHHHHHHHHhcCCCCEEEeCCCCCHHHHHHHHhcCCCCEEEEeccccCCHHHHHH
Confidence 55554 4444555432 2367778888887766 33445578899999998888999999877653221 278
Q ss_pred HHHHHHHhCCeEEecccCcccc
Q 025500 196 IIPLCRELGIGIVPYSPLGRGF 217 (252)
Q Consensus 196 l~~~~~~~gi~v~a~spl~~G~ 217 (252)
+...|+++|+.++..+-+..++
T Consensus 271 ~~~~a~~~gi~~~~~~~~~~~i 292 (316)
T cd03319 271 IADLARAAGLKVMVGCMVESSL 292 (316)
T ss_pred HHHHHHHcCCCEEEECchhhHH
Confidence 9999999999999876665443
|
The genomic context and the substrate specificity of characterized members of this family from E.coli and B.subtilis indicates a possible role in the metabolism of the murein peptide of peptidoglycan, of which L-Ala-D-Glu is a component. L-Ala-D/L-Glu epimerase is a member of the enolase-superfamily, which is characterized by the presence of an enolate anion intermediate which is generated by abstraction of the alpha-proton of the carboxylate substrate by an active site residue and is stabilized by coordination to the essential Mg2+ ion. |
| >cd03316 MR_like Mandelate racemase (MR)-like subfamily of the enolase superfamily | Back alignment and domain information |
|---|
Probab=93.91 E-value=2.8 Score=37.28 Aligned_cols=154 Identities=12% Similarity=0.093 Sum_probs=93.7
Q ss_pred CHHHHHHHHHHHHHCCCCEEeCcCCcCC-----CcHHHHHHHHHhcCCCCCEEEEeccCccCCCCcccccCCChHHHHHH
Q 025500 39 SEEDGISMIKHAFSKGITFFDTADVYGQ-----NANEVLLGKALKQLPREKIQVATKFGIAGIGVAGVIVKGAPDYVRSC 113 (252)
Q Consensus 39 ~~~~~~~~l~~A~~~Gin~~Dta~~Yg~-----g~se~~ig~~l~~~~R~~~~i~tK~~~~~~~~~~~~~~~~~~~i~~~ 113 (252)
+.++..+..+.+.+.|++.|-.--..+. -..+..+=+++++.-..++.|...... .++.+...
T Consensus 139 ~~~~~~~~a~~~~~~Gf~~~Kik~g~~~~~~~~~~~d~~~v~~ir~~~g~~~~l~vDaN~----------~~~~~~a~-- 206 (357)
T cd03316 139 SPEELAEEAKRAVAEGFTAVKLKVGGPDSGGEDLREDLARVRAVREAVGPDVDLMVDANG----------RWDLAEAI-- 206 (357)
T ss_pred CHHHHHHHHHHHHHcCCCEEEEcCCCCCcchHHHHHHHHHHHHHHHhhCCCCEEEEECCC----------CCCHHHHH--
Confidence 4677788888889999998875432221 011222223444422234555544421 13444433
Q ss_pred HHHHHHHcCCCcccEEEccCCCCCCCHHHHHHHHHHHHHcCCcc-EEEccCCCHHHHHHHhhcCCceEEeeecCccccch
Q 025500 114 CEASLKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIK-YIGLSEASPGTIRRAHAVHPITAVQMEWSLWTRDI 192 (252)
Q Consensus 114 ~~~sL~~Lg~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~G~ir-~iGvs~~~~~~l~~~~~~~~~~~~q~~~~~~~~~~ 192 (252)
+.+++|. ..++.+++.|-.. +.++.+.+++++-.+. ..|=+-++++.+.++++...++++|+.....-.-.
T Consensus 207 --~~~~~l~--~~~i~~iEqP~~~----~~~~~~~~l~~~~~ipi~~dE~~~~~~~~~~~i~~~~~d~v~~k~~~~GGi~ 278 (357)
T cd03316 207 --RLARALE--EYDLFWFEEPVPP----DDLEGLARLRQATSVPIAAGENLYTRWEFRDLLEAGAVDIIQPDVTKVGGIT 278 (357)
T ss_pred --HHHHHhC--ccCCCeEcCCCCc----cCHHHHHHHHHhCCCCEEeccccccHHHHHHHHHhCCCCEEecCccccCCHH
Confidence 3333332 2345566666442 2467778888875555 33444578899999998888999999876654221
Q ss_pred -hhhHHHHHHHhCCeEEeccc
Q 025500 193 -EEEIIPLCRELGIGIVPYSP 212 (252)
Q Consensus 193 -~~~l~~~~~~~gi~v~a~sp 212 (252)
-..+.+.|+++|+.++..+.
T Consensus 279 ~~~~i~~~a~~~g~~~~~~~~ 299 (357)
T cd03316 279 EAKKIAALAEAHGVRVAPHGA 299 (357)
T ss_pred HHHHHHHHHHHcCCeEeccCC
Confidence 27899999999999887764
|
Enzymes of this subgroup share three conserved carboxylate ligands for the essential divalent metal ion (usually Mg2+), two aspartates and a glutamate, and conserved catalytic residues, a Lys-X-Lys motif and a conserved histidine-aspartate dyad. Members of the MR subgroup are mandelate racemase, D-glucarate/L-idarate dehydratase (GlucD), D-altronate/D-mannonate dehydratase , D-galactonate dehydratase (GalD) , D-gluconate dehydratase (GlcD), and L-rhamnonate dehydratase (RhamD). |
| >cd03315 MLE_like Muconate lactonizing enzyme (MLE) like subgroup of the enolase superfamily | Back alignment and domain information |
|---|
Probab=93.63 E-value=4 Score=34.71 Aligned_cols=158 Identities=15% Similarity=0.148 Sum_probs=96.2
Q ss_pred CHHHHHHHHHHHHHCCCCEEeCcCCcCCCcHHHHHHHHHhcCCCCCEEEEeccCccCCCCcccccCCChHHHHHHHHHHH
Q 025500 39 SEEDGISMIKHAFSKGITFFDTADVYGQNANEVLLGKALKQLPREKIQVATKFGIAGIGVAGVIVKGAPDYVRSCCEASL 118 (252)
Q Consensus 39 ~~~~~~~~l~~A~~~Gin~~Dta~~Yg~g~se~~ig~~l~~~~R~~~~i~tK~~~~~~~~~~~~~~~~~~~i~~~~~~sL 118 (252)
+.++..+.++.+.+.|++.|-.--.-.. ..+...=+++++.-.+++.|...... .++.+...+-+ +.|
T Consensus 85 ~~~~~~~~~~~~~~~G~~~~KiKvg~~~-~~d~~~v~~vr~~~g~~~~l~vDan~----------~~~~~~a~~~~-~~l 152 (265)
T cd03315 85 EPAEVAEEARRALEAGFRTFKLKVGRDP-ARDVAVVAALREAVGDDAELRVDANR----------GWTPKQAIRAL-RAL 152 (265)
T ss_pred CHHHHHHHHHHHHHCCCCEEEEecCCCH-HHHHHHHHHHHHhcCCCCEEEEeCCC----------CcCHHHHHHHH-HHH
Confidence 4577778888899999998875421111 11222224445422334444333321 13444433322 344
Q ss_pred HHcCCCcccEEEccCCCCCCCHHHHHHHHHHHHHcCCcc-EEEccCCCHHHHHHHhhcCCceEEeeecCccccch-hhhH
Q 025500 119 KRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIK-YIGLSEASPGTIRRAHAVHPITAVQMEWSLWTRDI-EEEI 196 (252)
Q Consensus 119 ~~Lg~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~G~ir-~iGvs~~~~~~l~~~~~~~~~~~~q~~~~~~~~~~-~~~l 196 (252)
+.++ +.+++.|-.. +.++.+.++++.-.+. ..|=+-++...+.++++...++++|+..+..-.-. ...+
T Consensus 153 ~~~~-----i~~iEeP~~~----~d~~~~~~l~~~~~ipia~dE~~~~~~~~~~~i~~~~~d~v~~k~~~~GGi~~~~~~ 223 (265)
T cd03315 153 EDLG-----LDYVEQPLPA----DDLEGRAALARATDTPIMADESAFTPHDAFRELALGAADAVNIKTAKTGGLTKAQRV 223 (265)
T ss_pred HhcC-----CCEEECCCCc----ccHHHHHHHHhhCCCCEEECCCCCCHHHHHHHHHhCCCCEEEEecccccCHHHHHHH
Confidence 4444 4445666432 2356677777776555 34445578888999888888999999887755322 2789
Q ss_pred HHHHHHhCCeEEecccCcccc
Q 025500 197 IPLCRELGIGIVPYSPLGRGF 217 (252)
Q Consensus 197 ~~~~~~~gi~v~a~spl~~G~ 217 (252)
.+.|+++|+.++..+.+..|+
T Consensus 224 ~~~A~~~gi~~~~~~~~~s~i 244 (265)
T cd03315 224 LAVAEALGLPVMVGSMIESGL 244 (265)
T ss_pred HHHHHHcCCcEEecCccchHH
Confidence 999999999999887666553
|
Enzymes of this subgroup share three conserved carboxylate ligands for the essential divalent metal ion (usually Mg2+), two aspartates and a glutamate, and residues that can function as general acid/base catalysts, a Lys-X-Lys motif and another conserved lysine. Despite these conserved residues, the members of the MLE subgroup, like muconate lactonizing enzyme, o-succinylbenzoate synthase (OSBS) and N-acylamino acid racemase (NAAAR), catalyze different reactions. |
| >PRK08392 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=92.43 E-value=4.2 Score=33.56 Aligned_cols=149 Identities=17% Similarity=0.140 Sum_probs=74.4
Q ss_pred HHHHHHHHHHHHCCCCEEeCcCCcCCC---cHHHHHHHHHhcCCCCCEEEEeccCccCCCCcccccCCChHHHHHHHHHH
Q 025500 41 EDGISMIKHAFSKGITFFDTADVYGQN---ANEVLLGKALKQLPREKIQVATKFGIAGIGVAGVIVKGAPDYVRSCCEAS 117 (252)
Q Consensus 41 ~~~~~~l~~A~~~Gin~~Dta~~Yg~g---~se~~ig~~l~~~~R~~~~i~tK~~~~~~~~~~~~~~~~~~~i~~~~~~s 117 (252)
....+.++.|.+.|++.|=.+++.... .-+..+.+..+-..+.++.| ..|... +..++. .+..++.
T Consensus 14 ~~~~e~v~~A~~~Gl~~i~iTdH~~~~~~~~~~~y~~~i~~l~~~~~i~i--l~GiE~--------~~~~~~-~~~~~~~ 82 (215)
T PRK08392 14 GSVRDNIAEAERKGLRLVGISDHIHYFTPSKFNAYINEIRQWGEESEIVV--LAGIEA--------NITPNG-VDITDDF 82 (215)
T ss_pred CCHHHHHHHHHHcCCCEEEEccCCCccchhhHHHHHHHHHHHhhccCceE--EEeEEe--------eecCCc-chhHHHH
Confidence 346889999999999998777665311 11222221111011223333 222211 000111 1233344
Q ss_pred HHHcCCCcccEEEccCCCCCCCHHHHHHHHHHHHHcCCccEEEccCC-------C-HHHHHHHh----hcC-CceEEeee
Q 025500 118 LKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEA-------S-PGTIRRAH----AVH-PITAVQME 184 (252)
Q Consensus 118 L~~Lg~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~G~ir~iGvs~~-------~-~~~l~~~~----~~~-~~~~~q~~ 184 (252)
+++ .|++ +..+|........++..+.+.++.+.+.+.-+|=-+. . .+.+++++ +.. .+.+|-
T Consensus 83 ~~~--~D~v-I~SvH~~~~~~~~~~Y~~~~~~~~~~~~~dvlgH~d~~~~~~~~~~~~~~~~i~~~~~~~g~~lEiNt-- 157 (215)
T PRK08392 83 AKK--LDYV-IASVHEWFGRPEHHEYIELVKLALMDENVDIIGHFGNSFPYIGYPSEEELKEILDLAEAYGKAFEISS-- 157 (215)
T ss_pred Hhh--CCEE-EEEeecCcCCcHHHHHHHHHHHHHhcCCCCEEeCCCccccCCCCchHHHHHHHHHHHHHhCCEEEEeC--
Confidence 443 4555 6677854333335567788888888888777764321 1 12333322 222 233332
Q ss_pred cCccccchhhhHHHHHHHhCCeEE
Q 025500 185 WSLWTRDIEEEIIPLCRELGIGIV 208 (252)
Q Consensus 185 ~~~~~~~~~~~l~~~~~~~gi~v~ 208 (252)
..+.+...+++.|++.|+.++
T Consensus 158 ---~~~~p~~~~l~~~~~~G~~~~ 178 (215)
T PRK08392 158 ---RYRVPDLEFIRECIKRGIKLT 178 (215)
T ss_pred ---CCCCCCHHHHHHHHHcCCEEE
Confidence 112223578888888887655
|
|
| >PRK10550 tRNA-dihydrouridine synthase C; Provisional | Back alignment and domain information |
|---|
Probab=91.81 E-value=7.4 Score=34.23 Aligned_cols=132 Identities=11% Similarity=0.009 Sum_probs=85.2
Q ss_pred CHHHHHHHHHHHHHCCCCEEeC---cC-----CcCCC----cHHHHHHHHHhcC---CCCCEEEEeccCccCCCCccccc
Q 025500 39 SEEDGISMIKHAFSKGITFFDT---AD-----VYGQN----ANEVLLGKALKQL---PREKIQVATKFGIAGIGVAGVIV 103 (252)
Q Consensus 39 ~~~~~~~~l~~A~~~Gin~~Dt---a~-----~Yg~g----~se~~ig~~l~~~---~R~~~~i~tK~~~~~~~~~~~~~ 103 (252)
++++..++...+.+.|+..||- ++ .||.| ..-+.+.+.++.+ -..++-|+.|+...+.
T Consensus 73 ~p~~~~~aA~~~~~~g~d~IdiN~GCP~~~v~~~g~Gs~Ll~~~~~~~eiv~avr~~~~~~~pVsvKiR~g~~------- 145 (312)
T PRK10550 73 YPQWLAENAARAVELGSWGVDLNCGCPSKTVNGSGGGATLLKDPELIYQGAKAMREAVPAHLPVTVKVRLGWD------- 145 (312)
T ss_pred CHHHHHHHHHHHHHcCCCEEEEeCCCCchHHhcCCCchHhhcCHHHHHHHHHHHHHhcCCCcceEEEEECCCC-------
Confidence 6788888888889999999993 33 25544 2334455555442 1225788889765321
Q ss_pred CCChHHHHHHHHHHHHHcCCCcccEEEccCCCCCCCHHH---HHHHHHHHHHcCCccEEEccC-CCHHHHHHHhhcCCce
Q 025500 104 KGAPDYVRSCCEASLKRLDVDYIDLYYQHRVDTSVPIEE---TIGEMKKLVEEGKIKYIGLSE-ASPGTIRRAHAVHPIT 179 (252)
Q Consensus 104 ~~~~~~i~~~~~~sL~~Lg~d~iDl~~lh~~~~~~~~~~---~~~~L~~l~~~G~ir~iGvs~-~~~~~l~~~~~~~~~~ 179 (252)
+.+. ...+-+.++..|+ |.+.+|.......... -|+...++++.-.|.-||..+ .++++.+++++....+
T Consensus 146 --~~~~-~~~~a~~l~~~Gv---d~i~Vh~Rt~~~~y~g~~~~~~~i~~ik~~~~iPVi~nGdI~t~~da~~~l~~~g~D 219 (312)
T PRK10550 146 --SGER-KFEIADAVQQAGA---TELVVHGRTKEDGYRAEHINWQAIGEIRQRLTIPVIANGEIWDWQSAQQCMAITGCD 219 (312)
T ss_pred --CchH-HHHHHHHHHhcCC---CEEEECCCCCccCCCCCcccHHHHHHHHhhcCCcEEEeCCcCCHHHHHHHHhccCCC
Confidence 1122 2356666777775 6777887544322211 378888888887899999888 5788888888665566
Q ss_pred EEee
Q 025500 180 AVQM 183 (252)
Q Consensus 180 ~~q~ 183 (252)
.+++
T Consensus 220 gVmi 223 (312)
T PRK10550 220 AVMI 223 (312)
T ss_pred EEEE
Confidence 6655
|
|
| >TIGR02370 pyl_corrinoid methyltransferase cognate corrinoid proteins, Methanosarcina family | Back alignment and domain information |
|---|
Probab=91.81 E-value=2.5 Score=34.55 Aligned_cols=145 Identities=12% Similarity=0.033 Sum_probs=89.2
Q ss_pred CHHHHHHHHHHHHHCCCCEEeCcCCcCCCcHHHHHHHHHhc----CCCCCEEEEeccCccCCCCcccccCCChHHHHHHH
Q 025500 39 SEEDGISMIKHAFSKGITFFDTADVYGQNANEVLLGKALKQ----LPREKIQVATKFGIAGIGVAGVIVKGAPDYVRSCC 114 (252)
Q Consensus 39 ~~~~~~~~l~~A~~~Gin~~Dta~~Yg~g~se~~ig~~l~~----~~R~~~~i~tK~~~~~~~~~~~~~~~~~~~i~~~~ 114 (252)
|.+++.++++.|++.|++..| .| ++.+..+++. ..++++++.-=. ...+.+++.+
T Consensus 10 d~~~~~~~v~~~l~~g~~~~~---i~-----~~~l~p~m~~iG~~w~~gei~va~~~-------------~a~~~~~~~l 68 (197)
T TIGR02370 10 EEDDVVEGAQKALDAGIDPIE---LI-----EKGLMAGMGVVGKLFEDGELFLPHVM-------------MSADAMLAGI 68 (197)
T ss_pred CHHHHHHHHHHHHHcCCCHHH---HH-----HHHHHHHHHHHHHHHcCCCccHHHHH-------------HHHHHHHHHH
Confidence 789999999999999987666 22 3444455543 345555552111 2344555566
Q ss_pred HHHHHHcCCC----cccEEEccCCCCCCCHHHHHHHHHHHHHcCC-ccEEEccCCCHHHHHHHhhcCCceEEeeecCccc
Q 025500 115 EASLKRLDVD----YIDLYYQHRVDTSVPIEETIGEMKKLVEEGK-IKYIGLSEASPGTIRRAHAVHPITAVQMEWSLWT 189 (252)
Q Consensus 115 ~~sL~~Lg~d----~iDl~~lh~~~~~~~~~~~~~~L~~l~~~G~-ir~iGvs~~~~~~l~~~~~~~~~~~~q~~~~~~~ 189 (252)
+.....+... .---+++-.+..+.+--...-.-.-++..|. |.++|. +.+.+.+.+......++++.+.++...
T Consensus 69 ~~l~~~~~~~~~~~~~~~vv~~t~~gd~H~lG~~~v~~~l~~~G~~vi~LG~-~vp~e~~v~~~~~~~pd~v~lS~~~~~ 147 (197)
T TIGR02370 69 KVLTPEMEKAVETEVLGKVVCGVAEGDVHDIGKNIVVTMLRANGFDVIDLGR-DVPIDTVVEKVKKEKPLMLTGSALMTT 147 (197)
T ss_pred HHHHHHhhccccCCCCCeEEEEeCCCchhHHHHHHHHHHHHhCCcEEEECCC-CCCHHHHHHHHHHcCCCEEEEcccccc
Confidence 5555555421 1112333334333333333333445667787 778885 556677777777788999999887666
Q ss_pred cchh-hhHHHHHHHhCC
Q 025500 190 RDIE-EEIIPLCRELGI 205 (252)
Q Consensus 190 ~~~~-~~l~~~~~~~gi 205 (252)
+... .++++.+++.|.
T Consensus 148 ~~~~~~~~i~~l~~~~~ 164 (197)
T TIGR02370 148 TMYGQKDINDKLKEEGY 164 (197)
T ss_pred CHHHHHHHHHHHHHcCC
Confidence 5433 789999999864
|
This model describes a subfamily of the B12 binding domain (pfam02607, pfam02310) proteins. Members of the seed alignment include corrinoid proteins specific to four different, mutally non-homologous enzymes of the genus Methanosarcina. Three of the four cognate enzymes (trimethylamine, dimethylamine, and monomethylamine methyltransferases) all have the unusual, ribosomally incorporated amino acid pyrrolysine at the active site. All act in systems in which a methyl group is transferred to the corrinoid protein to create methylcobalamin, from which the methyl group is later transferred elsewhere. |
| >cd03174 DRE_TIM_metallolyase DRE-TIM metallolyase superfamily | Back alignment and domain information |
|---|
Probab=91.50 E-value=1.9 Score=36.49 Aligned_cols=105 Identities=16% Similarity=0.125 Sum_probs=69.8
Q ss_pred CChHHHHHHHHHHHHHcCCCcccEEEccCCCCCCCHHHHHHHHHHHHHcC-CccEEEccCCCHHHHHHHhhcCCceEEee
Q 025500 105 GAPDYVRSCCEASLKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEG-KIKYIGLSEASPGTIRRAHAVHPITAVQM 183 (252)
Q Consensus 105 ~~~~~i~~~~~~sL~~Lg~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~G-~ir~iGvs~~~~~~l~~~~~~~~~~~~q~ 183 (252)
++.+...+ +-+.|..+|+++|++-....+......++.++.++.+++.+ .++...++....+.++.+.+.. ++.+++
T Consensus 16 ~s~e~~~~-i~~~L~~~GV~~IEvg~~~~~~~~p~~~~~~~~i~~l~~~~~~~~~~~l~~~~~~~i~~a~~~g-~~~i~i 93 (265)
T cd03174 16 FSTEDKLE-IAEALDEAGVDSIEVGSGASPKAVPQMEDDWEVLRAIRKLVPNVKLQALVRNREKGIERALEAG-VDEVRI 93 (265)
T ss_pred CCHHHHHH-HHHHHHHcCCCEEEeccCcCccccccCCCHHHHHHHHHhccCCcEEEEEccCchhhHHHHHhCC-cCEEEE
Confidence 45555554 44458889999999887765533222346788889999988 5777677766666777776643 566666
Q ss_pred ecCccc--------c------chhhhHHHHHHHhCCeEEecc
Q 025500 184 EWSLWT--------R------DIEEEIIPLCRELGIGIVPYS 211 (252)
Q Consensus 184 ~~~~~~--------~------~~~~~l~~~~~~~gi~v~a~s 211 (252)
.+...+ + ..-...+++++++|+.+..+-
T Consensus 94 ~~~~s~~~~~~~~~~~~~~~~~~~~~~i~~a~~~G~~v~~~~ 135 (265)
T cd03174 94 FDSASETHSRKNLNKSREEDLENAEEAIEAAKEAGLEVEGSL 135 (265)
T ss_pred EEecCHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCCeEEEEE
Confidence 655441 1 112677888999998877655
|
The DRE-TIM metallolyase superfamily includes 2-isopropylmalate synthase (IPMS), alpha-isopropylmalate synthase (LeuA), 3-hydroxy-3-methylglutaryl-CoA lyase, homocitrate synthase, citramalate synthase, 4-hydroxy-2-oxovalerate aldolase, re-citrate synthase, transcarboxylase 5S, pyruvate carboxylase, AksA, and FrbC. These members all share a conserved triose-phosphate isomerase (TIM) barrel domain consisting of a core beta(8)-alpha(8) motif with the eight parallel beta strands forming an enclosed barrel surrounded by eight alpha helices. The domain has a catalytic center containing a divalent cation-binding site formed by a cluster of invariant residues that cap the core of the barrel. In addition, the catalytic site includes three invariant residues - an aspartate (D), an arginine (R), and a glutamate (E) - which is the basis for the domain name "DRE-TIM". |
| >cd06543 GH18_PF-ChiA-like PF-ChiA is an uncharacterized chitinase found in the hyperthermophilic archaeon Pyrococcus furiosus with a glycosyl hydrolase family 18 (GH18) catalytic domain as well as a cellulose-binding domain | Back alignment and domain information |
|---|
Probab=91.39 E-value=7.4 Score=33.92 Aligned_cols=182 Identities=15% Similarity=0.134 Sum_probs=87.8
Q ss_pred ceeecccccCCCCC-CCCCHHHHHHHHHHHHHC-CCCEEeCcCCcCCCc---HHHHHHHHHhcC--CCCCEEEEeccCcc
Q 025500 22 KLGYGCMNLSGGYS-SPVSEEDGISMIKHAFSK-GITFFDTADVYGQNA---NEVLLGKALKQL--PREKIQVATKFGIA 94 (252)
Q Consensus 22 ~lglG~~~~g~~~~-~~~~~~~~~~~l~~A~~~-Gin~~Dta~~Yg~g~---se~~ig~~l~~~--~R~~~~i~tK~~~~ 94 (252)
.|.||.+.-.. +. ...+.+...+.+...++. |++.||----|+.-. +-..+-++|+.+ .+..+.|+.-+...
T Consensus 71 iiS~GG~~g~~-~~~~~~~~~~~~~a~~~~i~~y~~dgiDfDiE~~~~~d~~~~~~~~~al~~Lq~~~p~l~vs~Tlp~~ 149 (294)
T cd06543 71 IVSFGGASGTP-LATSCTSADQLAAAYQKVIDAYGLTHLDFDIEGGALTDTAAIDRRAQALALLQKEYPDLKISFTLPVL 149 (294)
T ss_pred EEEecCCCCCc-cccCcccHHHHHHHHHHHHHHhCCCeEEEeccCCccccchhHHHHHHHHHHHHHHCCCcEEEEecCCC
Confidence 46788776332 11 112445554555555554 999999755554211 124455566542 22356666555433
Q ss_pred CCCCcccccCCChHHHHHHHHHHHHHcCC--CcccEEEccCCCC--CCC-HHHHHHHHHHHHHcCCccEEEccCCCHHHH
Q 025500 95 GIGVAGVIVKGAPDYVRSCCEASLKRLDV--DYIDLYYQHRVDT--SVP-IEETIGEMKKLVEEGKIKYIGLSEASPGTI 169 (252)
Q Consensus 95 ~~~~~~~~~~~~~~~i~~~~~~sL~~Lg~--d~iDl~~lh~~~~--~~~-~~~~~~~L~~l~~~G~ir~iGvs~~~~~~l 169 (252)
+. .++++.+ .+-+..+..|+ |++-++-+..-.. ..+ -+.+..+.+.++.+=+--+=+ ++.+++
T Consensus 150 p~-------gl~~~g~--~~l~~a~~~Gv~~d~VNiMtmDyg~~~~~~~mg~~a~~aa~~~~~ql~~~~~~---~s~~~~ 217 (294)
T cd06543 150 PT-------GLTPDGL--NVLEAAAANGVDLDTVNIMTMDYGSSAGSQDMGAAAISAAESLHDQLKDLYPK---LSDAEL 217 (294)
T ss_pred CC-------CCChhHH--HHHHHHHHcCCCcceeeeeeecCCCCCCcccHHHHHHHHHHHHHHHHHHHccC---CCHHHH
Confidence 21 1233322 34455566665 4444444433322 122 234555555555442111111 222232
Q ss_pred HHHhhcCCceEEeeec--CccccchhhhHHHHHHHhCCeEEecccCcccc
Q 025500 170 RRAHAVHPITAVQMEW--SLWTRDIEEEIIPLCRELGIGIVPYSPLGRGF 217 (252)
Q Consensus 170 ~~~~~~~~~~~~q~~~--~~~~~~~~~~l~~~~~~~gi~v~a~spl~~G~ 217 (252)
-..+...|. +-+.+. ..+.......+.++|+++||+-++|-.+.+..
T Consensus 218 ~~~ig~TpM-iG~nD~~~e~ft~~da~~~~~fA~~~~l~~~s~Ws~~RD~ 266 (294)
T cd06543 218 WAMIGVTPM-IGVNDVGSEVFTLADAQTLVDFAKEKGLGRLSMWSLNRDR 266 (294)
T ss_pred HHHcccccc-ccccCCCCceeeHHHHHHHHHHHHhCCCCeEeeeeccCCC
Confidence 222332221 111111 02222223789999999999999999887554
|
Members of this domain family are found not only in archaea but also in eukaryotes and prokaryotes. PF-ChiA exhibits hydrolytic activity toward both colloidal and crystalline (beta/alpha) chitins at high temperature. |
| >PF07021 MetW: Methionine biosynthesis protein MetW; InterPro: IPR010743 This family consists of several bacterial and one archaeal methionine biosynthesis MetW proteins | Back alignment and domain information |
|---|
Probab=90.85 E-value=1.2 Score=36.18 Aligned_cols=102 Identities=14% Similarity=0.147 Sum_probs=71.2
Q ss_pred HHHHHHHcCCCcccEEEccCCCCCCCHHHHHHHHHHHHHcCCccEEEccCCCHHHHHHHhh-cC-CceEEeeecCccccc
Q 025500 114 CEASLKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPGTIRRAHA-VH-PITAVQMEWSLWTRD 191 (252)
Q Consensus 114 ~~~sL~~Lg~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~G~ir~iGvs~~~~~~l~~~~~-~~-~~~~~q~~~~~~~~~ 191 (252)
+++.|..+.-+.+|.+.+..- -+.+..-.+.|+++..-|+---|++.||.-+.....+- .+ -|..-+++|+.++.+
T Consensus 64 ld~gL~~f~d~sFD~VIlsqt--LQ~~~~P~~vL~EmlRVgr~~IVsFPNFg~W~~R~~l~~~GrmPvt~~lPy~WYdTP 141 (193)
T PF07021_consen 64 LDEGLADFPDQSFDYVILSQT--LQAVRRPDEVLEEMLRVGRRAIVSFPNFGHWRNRLQLLLRGRMPVTKALPYEWYDTP 141 (193)
T ss_pred HHHhHhhCCCCCccEEehHhH--HHhHhHHHHHHHHHHHhcCeEEEEecChHHHHHHHHHHhcCCCCCCCCCCCcccCCC
Confidence 444555555566666666432 11223345568888888998889999998876555433 23 355677888888865
Q ss_pred h-----hhhHHHHHHHhCCeEEecccCcccc
Q 025500 192 I-----EEEIIPLCRELGIGIVPYSPLGRGF 217 (252)
Q Consensus 192 ~-----~~~l~~~~~~~gi~v~a~spl~~G~ 217 (252)
. -.+.-++|++.|+.|.-..++.++.
T Consensus 142 Nih~~Ti~DFe~lc~~~~i~I~~~~~~~~~~ 172 (193)
T PF07021_consen 142 NIHLCTIKDFEDLCRELGIRIEERVFLDGGR 172 (193)
T ss_pred CcccccHHHHHHHHHHCCCEEEEEEEEcCCC
Confidence 2 2889999999999999999998776
|
Biosynthesis of methionine from homoserine in Pseudomonas putida takes place in three steps. The first step is the acylation of homoserine to yield an acyl-L-homoserine. This reaction is catalysed by the products of the metXW genes and is equivalent to the first step in enterobacteria, Gram-positive bacteria and fungi, except that in these microorganisms the reaction is catalysed by a single polypeptide (the product of the metA gene in Escherichia coli and the met5 gene product in Neurospora crassa). In P. putida, as in Gram-positive bacteria and certain fungi, the second and third steps are a direct sulphydrylation that converts the O-acyl-L-homoserine into homocysteine and further methylation to yield methionine. The latter reaction can be mediated by either of the two methionine synthetases present in the cells []. |
| >cd02070 corrinoid_protein_B12-BD B12 binding domain of corrinoid proteins | Back alignment and domain information |
|---|
Probab=90.44 E-value=6.9 Score=31.93 Aligned_cols=145 Identities=18% Similarity=0.145 Sum_probs=87.6
Q ss_pred CHHHHHHHHHHHHHCCCCEEeCcCCcCCCcHHHHHHHHHhc----CCCCCEEEEeccCccCCCCcccccCCChHHHHHHH
Q 025500 39 SEEDGISMIKHAFSKGITFFDTADVYGQNANEVLLGKALKQ----LPREKIQVATKFGIAGIGVAGVIVKGAPDYVRSCC 114 (252)
Q Consensus 39 ~~~~~~~~l~~A~~~Gin~~Dta~~Yg~g~se~~ig~~l~~----~~R~~~~i~tK~~~~~~~~~~~~~~~~~~~i~~~~ 114 (252)
|++.+.+++..+++.|+...| .| +..+..+++. ..++++++.-=. ...+.+++.+
T Consensus 9 D~~~~~~~v~~~l~~g~~~~~---i~-----~~~l~p~m~~vG~~w~~~~i~va~e~-------------~as~~~~~~l 67 (201)
T cd02070 9 DEEETVELVKKALEAGIDPQD---II-----EEGLAPGMDIVGDKYEEGEIFVPELL-------------MAADAMKAGL 67 (201)
T ss_pred CHHHHHHHHHHHHHcCCCHHH---HH-----HHHHHHHHHHHHHHHccCCeeHHHHH-------------HHHHHHHHHH
Confidence 789999999999999986554 22 2344444443 345556553221 2234455555
Q ss_pred HHHHHHcCCCc---ccEEEccCCCCCCCHHHHHHHHHHHHHcCC-ccEEEccCCCHHHHHHHhhcCCceEEeeecCcccc
Q 025500 115 EASLKRLDVDY---IDLYYQHRVDTSVPIEETIGEMKKLVEEGK-IKYIGLSEASPGTIRRAHAVHPITAVQMEWSLWTR 190 (252)
Q Consensus 115 ~~sL~~Lg~d~---iDl~~lh~~~~~~~~~~~~~~L~~l~~~G~-ir~iGvs~~~~~~l~~~~~~~~~~~~q~~~~~~~~ 190 (252)
......+.... ---+++-.+..+.+.-...=.-.-++..|. |.++| .+.+.+.+.+......++++-+.++...+
T Consensus 68 ~~l~~~~~~~~~~~~~~vl~~~~~gd~H~lG~~~v~~~l~~~G~~vi~lG-~~~p~~~l~~~~~~~~~d~v~lS~~~~~~ 146 (201)
T cd02070 68 DLLKPLLGKSKSAKKGKVVIGTVEGDIHDIGKNLVATMLEANGFEVIDLG-RDVPPEEFVEAVKEHKPDILGLSALMTTT 146 (201)
T ss_pred HHHHHHHhhcCCCCCCeEEEEecCCccchHHHHHHHHHHHHCCCEEEECC-CCCCHHHHHHHHHHcCCCEEEEecccccc
Confidence 55544443322 113344444433333333333345667887 67788 56677888888777888898888866554
Q ss_pred chh-hhHHHHHHHhCC
Q 025500 191 DIE-EEIIPLCRELGI 205 (252)
Q Consensus 191 ~~~-~~l~~~~~~~gi 205 (252)
-.. ..+++.+++.+.
T Consensus 147 ~~~~~~~i~~lr~~~~ 162 (201)
T cd02070 147 MGGMKEVIEALKEAGL 162 (201)
T ss_pred HHHHHHHHHHHHHCCC
Confidence 322 778888888854
|
A family of small methanogenic corrinoid proteins that bind methyl-Co(III) 5-hydroxybenzimidazolylcobamide as a cofactor. They play a role on the methanogenesis from trimethylamine, dimethylamine or monomethylamine, which is initiated by a series of corrinoid-dependent methyltransferases. |
| >TIGR01928 menC_lowGC/arch o-succinylbenzoic acid (OSB) synthetase | Back alignment and domain information |
|---|
Probab=90.15 E-value=13 Score=32.84 Aligned_cols=153 Identities=14% Similarity=0.094 Sum_probs=95.6
Q ss_pred CHHHHHHHHHHHHHCCCCEEeCcCCcCCCcHHHHHHHHHhc-CCCCCEEEEeccCccCCCCcccccCCChHHHHHHHHHH
Q 025500 39 SEEDGISMIKHAFSKGITFFDTADVYGQNANEVLLGKALKQ-LPREKIQVATKFGIAGIGVAGVIVKGAPDYVRSCCEAS 117 (252)
Q Consensus 39 ~~~~~~~~l~~A~~~Gin~~Dta~~Yg~g~se~~ig~~l~~-~~R~~~~i~tK~~~~~~~~~~~~~~~~~~~i~~~~~~s 117 (252)
++++..+.+..+.+.|++.|=.-- +. ..+.-.=+++++ .+ ++.|..-.. ..++++... . -+.
T Consensus 132 ~~~~~~~~a~~~~~~Gf~~~KiKv--~~-~~d~~~v~~vr~~~~--~~~l~vDaN----------~~~~~~~a~-~-~~~ 194 (324)
T TIGR01928 132 NDEQMLKQIESLKATGYKRIKLKI--TP-QIMHQLVKLRRLRFP--QIPLVIDAN----------ESYDLQDFP-R-LKE 194 (324)
T ss_pred CHHHHHHHHHHHHHcCCcEEEEEe--CC-chhHHHHHHHHHhCC--CCcEEEECC----------CCCCHHHHH-H-HHH
Confidence 456777888888899999874321 11 122233345554 32 332222211 123454431 1 233
Q ss_pred HHHcCCCcccEEEccCCCCCCCHHHHHHHHHHHHHcCCcc-EEEccCCCHHHHHHHhhcCCceEEeeecCccccch-hhh
Q 025500 118 LKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIK-YIGLSEASPGTIRRAHAVHPITAVQMEWSLWTRDI-EEE 195 (252)
Q Consensus 118 L~~Lg~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~G~ir-~iGvs~~~~~~l~~~~~~~~~~~~q~~~~~~~~~~-~~~ 195 (252)
|+. .++.++..|-.. +.++.+.+++++-.+. ..|=|.++...+.++++....+++|++.+..-.-. -..
T Consensus 195 l~~-----~~~~~iEeP~~~----~~~~~~~~l~~~~~~pia~dEs~~~~~~~~~~~~~~~~dvi~~d~~~~GGit~~~~ 265 (324)
T TIGR01928 195 LDR-----YQLLYIEEPFKI----DDLSMLDELAKGTITPICLDESITSLDDARNLIELGNVKVINIKPGRLGGLTEVQK 265 (324)
T ss_pred Hhh-----CCCcEEECCCCh----hHHHHHHHHHhhcCCCEeeCCCcCCHHHHHHHHHcCCCCEEEeCcchhcCHHHHHH
Confidence 433 456666666432 3467788888875554 55777789999999998888999999877644321 278
Q ss_pred HHHHHHHhCCeEEecccCcccc
Q 025500 196 IIPLCRELGIGIVPYSPLGRGF 217 (252)
Q Consensus 196 l~~~~~~~gi~v~a~spl~~G~ 217 (252)
+.+.|+++|+.++..+.+..|+
T Consensus 266 ~~~~A~~~gi~~~~~~~~es~i 287 (324)
T TIGR01928 266 AIETCREHGAKVWIGGMLETGI 287 (324)
T ss_pred HHHHHHHcCCeEEEcceEcccH
Confidence 9999999999999877666663
|
This model describes the enzyme o-succinylbenzoic acid synthetase (menC) that is involved in one of the steps of the menaquinone biosynthesis pathway. It takes SHCHC and makes it into 2-succinylbenzoate. Included in this model are low GC gram positive bacteria and archaea. Also included in the seed and in the model are enzymes with the com-name of N-acylamino acid racemase (or the more general term, racemase / racemase family), which refers to the enzyme's industrial application as racemases, and not to its biological function as o-succinylbenzoic acid synthetase. |
| >cd00308 enolase_like Enolase-superfamily, characterized by the presence of an enolate anion intermediate which is generated by abstraction of the alpha-proton of the carboxylate substrate by an active site residue and is stabilized by coordination to the essential Mg2+ ion | Back alignment and domain information |
|---|
Probab=89.52 E-value=3.4 Score=34.36 Aligned_cols=88 Identities=13% Similarity=0.058 Sum_probs=63.1
Q ss_pred ccEEEccCCCCCCCHHHHHHHHHHHHHcCCcc-EEEccCCCHHHHHHHhhcCCceEEeeecCccccchh-hhHHHHHHHh
Q 025500 126 IDLYYQHRVDTSVPIEETIGEMKKLVEEGKIK-YIGLSEASPGTIRRAHAVHPITAVQMEWSLWTRDIE-EEIIPLCREL 203 (252)
Q Consensus 126 iDl~~lh~~~~~~~~~~~~~~L~~l~~~G~ir-~iGvs~~~~~~l~~~~~~~~~~~~q~~~~~~~~~~~-~~l~~~~~~~ 203 (252)
.++.++..|-... .++.+.+|++...+. ..+=|-++.+.+.++++...++++|+..+..-.-.+ ..+.+.|+++
T Consensus 120 ~~i~~iEeP~~~~----d~~~~~~L~~~~~~pIa~dEs~~~~~~~~~~~~~~~~d~~~~k~~~~GGi~~~~~i~~~a~~~ 195 (229)
T cd00308 120 YGLAWIEEPCAPD----DLEGYAALRRRTGIPIAADESVTTVDDALEALELGAVDILQIKPTRVGGLTESRRAADLAEAF 195 (229)
T ss_pred cCCCeEECCCCcc----CHHHHHHHHhhCCCCEEeCCCCCCHHHHHHHHHcCCCCEEecCccccCCHHHHHHHHHHHHHc
Confidence 5667777775432 356677788777665 334445677888788777789999998877543222 6889999999
Q ss_pred CCeEEecccCcccc
Q 025500 204 GIGIVPYSPLGRGF 217 (252)
Q Consensus 204 gi~v~a~spl~~G~ 217 (252)
|+.++..+.+..|.
T Consensus 196 gi~~~~~~~~~s~i 209 (229)
T cd00308 196 GIRVMVHGTLESSI 209 (229)
T ss_pred CCEEeecCCCCCHH
Confidence 99999988776553
|
Enolase superfamily contains different enzymes, like enolases, glutarate-, fucanate- and galactonate dehydratases, o-succinylbenzoate synthase, N-acylamino acid racemase, L-alanine-DL-glutamate epimerase, mandelate racemase, muconate lactonizing enzyme and 3-methylaspartase. |
| >cd03318 MLE Muconate Lactonizing Enzyme (MLE), an homooctameric enzyme, catalyses the conversion of cis,cis-muconate (CCM) to muconolactone (ML) in the catechol branch of the beta-ketoadipate pathway | Back alignment and domain information |
|---|
Probab=89.39 E-value=14 Score=32.95 Aligned_cols=156 Identities=9% Similarity=0.048 Sum_probs=90.2
Q ss_pred HHHHHHHHHHHHHCC-CCEEeCcCC-cCCCcHHHHHHHHHhcCCCCCEEEEeccCccCCCCcccccCCChHHHHHHHHHH
Q 025500 40 EEDGISMIKHAFSKG-ITFFDTADV-YGQNANEVLLGKALKQLPREKIQVATKFGIAGIGVAGVIVKGAPDYVRSCCEAS 117 (252)
Q Consensus 40 ~~~~~~~l~~A~~~G-in~~Dta~~-Yg~g~se~~ig~~l~~~~R~~~~i~tK~~~~~~~~~~~~~~~~~~~i~~~~~~s 117 (252)
.++..+....+++.| ++.|=.--. -......+.+ +++++.-.+++.|..=... .++.+... .+-+.
T Consensus 143 ~~~~~~~~~~~~~~G~f~~~KiKvg~~~~~~d~~~v-~avr~~~g~~~~l~iDaN~----------~~~~~~A~-~~~~~ 210 (365)
T cd03318 143 TERDIAEAEEMLEAGRHRRFKLKMGARPPADDLAHV-EAIAKALGDRASVRVDVNQ----------AWDESTAI-RALPR 210 (365)
T ss_pred HHHHHHHHHHHHhCCCceEEEEEeCCCChHHHHHHH-HHHHHHcCCCcEEEEECCC----------CCCHHHHH-HHHHH
Confidence 445556667778889 887764311 0100122333 4444422233333322211 13444322 22234
Q ss_pred HHHcCCCcccEEEccCCCCCCCHHHHHHHHHHHHHcCCcc-EEEccCCCHHHHHHHhhcCCceEEeeecCccccch-hhh
Q 025500 118 LKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIK-YIGLSEASPGTIRRAHAVHPITAVQMEWSLWTRDI-EEE 195 (252)
Q Consensus 118 L~~Lg~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~G~ir-~iGvs~~~~~~l~~~~~~~~~~~~q~~~~~~~~~~-~~~ 195 (252)
|+.+ ++.++..|-.. +.++.+.+|+++..+. ++|=+-++...+.++++...++++|++....-.-. -..
T Consensus 211 l~~~-----~~~~iEeP~~~----~~~~~~~~l~~~~~~pia~dE~~~~~~~~~~~i~~~~~d~~~~d~~~~GGit~~~~ 281 (365)
T cd03318 211 LEAA-----GVELIEQPVPR----ENLDGLARLRSRNRVPIMADESVSGPADAFELARRGAADVFSLKIAKSGGLRRAQK 281 (365)
T ss_pred HHhc-----CcceeeCCCCc----ccHHHHHHHHhhcCCCEEcCcccCCHHHHHHHHHhCCCCeEEEeecccCCHHHHHH
Confidence 4444 45566666432 2467788888876655 55666678889999988888899999876654321 278
Q ss_pred HHHHHHHhCCeEEecccCccc
Q 025500 196 IIPLCRELGIGIVPYSPLGRG 216 (252)
Q Consensus 196 l~~~~~~~gi~v~a~spl~~G 216 (252)
+...|+++|+.++..+-+..|
T Consensus 282 ~~~~a~~~gi~~~~~~~~~s~ 302 (365)
T cd03318 282 VAAIAEAAGIALYGGTMLESS 302 (365)
T ss_pred HHHHHHHcCCceeecCcchhH
Confidence 999999999999865444333
|
This pathway is used in soil microbes to breakdown lignin-derived aromatics, catechol and protocatechuate, to citric acid cycle intermediates. Some bacterial species are also capable of dehalogenating chloroaromatic compounds by the action of chloromuconate lactonizing enzymes (Cl-MLEs). MLEs are members of the enolase superfamily characterized by the presence of an enolate anion intermediate which is generated by abstraction of the alpha-proton of the carboxylate substrate by an active site residue and that is stabilized by coordination to the essential Mg2+ ion. |
| >cd03323 D-glucarate_dehydratase D-Glucarate dehydratase (GlucD) catalyzes the dehydration of both D-glucarate and L-idarate to form 5-keto-4-deoxy-D-glucarate (5-KDG) , the initial reaction of the catabolic pathway for (D)-glucarate | Back alignment and domain information |
|---|
Probab=88.49 E-value=19 Score=32.72 Aligned_cols=151 Identities=13% Similarity=0.100 Sum_probs=93.0
Q ss_pred CHHHHHHHHHHHHH-CCCCEEeCcCCcCCCcHHHHHHHHHhc-CCCCCEEEEeccCccCCCCcccccCCChHHHHHHHHH
Q 025500 39 SEEDGISMIKHAFS-KGITFFDTADVYGQNANEVLLGKALKQ-LPREKIQVATKFGIAGIGVAGVIVKGAPDYVRSCCEA 116 (252)
Q Consensus 39 ~~~~~~~~l~~A~~-~Gin~~Dta~~Yg~g~se~~ig~~l~~-~~R~~~~i~tK~~~~~~~~~~~~~~~~~~~i~~~~~~ 116 (252)
+.++..+..+.+.+ .|++.|=.--.-.+...+...=+++++ ++ ++.|..-... .++++... +
T Consensus 168 ~~e~~~~~a~~~~~~~Gf~~~KiKvG~~~~~~di~~v~avRea~~--~~~l~vDaN~----------~w~~~~A~----~ 231 (395)
T cd03323 168 TPEGVVRLARAAIDRYGFKSFKLKGGVLPGEEEIEAVKALAEAFP--GARLRLDPNG----------AWSLETAI----R 231 (395)
T ss_pred CHHHHHHHHHHHHHhcCCcEEEEecCCCCHHHHHHHHHHHHHhCC--CCcEEEeCCC----------CcCHHHHH----H
Confidence 55667777777775 599987543211110112222234444 42 3333333211 23444333 3
Q ss_pred HHHHcCCCcccEEEccCCCCCCCHHHHHHHHHHHHHcCCcc-EEEccCCCHHHHHHHhhcCCceEEeeecCccccch-hh
Q 025500 117 SLKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIK-YIGLSEASPGTIRRAHAVHPITAVQMEWSLWTRDI-EE 194 (252)
Q Consensus 117 sL~~Lg~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~G~ir-~iGvs~~~~~~l~~~~~~~~~~~~q~~~~~~~~~~-~~ 194 (252)
.+++|. . ++.++..|-. .++.+.+|+++..+. +.|=|-++..++.++++...++++|...+..-.-. -.
T Consensus 232 ~~~~l~--~-~l~~iEeP~~------d~~~~~~L~~~~~~PIa~dEs~~~~~~~~~~i~~~avdil~~d~~~~GGit~~~ 302 (395)
T cd03323 232 LAKELE--G-VLAYLEDPCG------GREGMAEFRRATGLPLATNMIVTDFRQLGHAIQLNAVDIPLADHHFWGGMRGSV 302 (395)
T ss_pred HHHhcC--c-CCCEEECCCC------CHHHHHHHHHhcCCCEEcCCcccCHHHHHHHHHcCCCcEEeeccccccCHHHHH
Confidence 444453 2 6667777653 377788888886655 55666678888999988888999999887654321 27
Q ss_pred hHHHHHHHhCCeEEecccCc
Q 025500 195 EIIPLCRELGIGIVPYSPLG 214 (252)
Q Consensus 195 ~l~~~~~~~gi~v~a~spl~ 214 (252)
.+.+.|+++|+.+...+...
T Consensus 303 kia~~A~~~gi~~~~h~~~e 322 (395)
T cd03323 303 RVAQVCETWGLGWGMHSNNH 322 (395)
T ss_pred HHHHHHHHcCCeEEEecCcc
Confidence 89999999999999887653
|
GlucD belongs to the enolase superfamily of enzymes, characterized by the presence of an enolate anion intermediate which is generated by abstraction of the alpha-proton of the carboxylate substrate by an active site residue and that is stabilized by coordination to the essential Mg2+ ion. |
| >cd03322 rpsA The starvation sensing protein RpsA from E | Back alignment and domain information |
|---|
Probab=88.46 E-value=18 Score=32.38 Aligned_cols=147 Identities=10% Similarity=0.045 Sum_probs=93.1
Q ss_pred CHHHHHHHHHHHHHCCCCEEeCcCCcCCCcHHHHHHHHHhcCCCCCEEEEeccCccCCCCcccccCCChHHHHHHHHHHH
Q 025500 39 SEEDGISMIKHAFSKGITFFDTADVYGQNANEVLLGKALKQLPREKIQVATKFGIAGIGVAGVIVKGAPDYVRSCCEASL 118 (252)
Q Consensus 39 ~~~~~~~~l~~A~~~Gin~~Dta~~Yg~g~se~~ig~~l~~~~R~~~~i~tK~~~~~~~~~~~~~~~~~~~i~~~~~~sL 118 (252)
+.++..+.+..+.+.|++.|=.-- .+.+ +++++.-.+++.+..-.. ..++.+... +.+
T Consensus 126 ~~~~~~~~a~~~~~~Gf~~~KiKv-------~~~v-~avre~~G~~~~l~vDaN----------~~w~~~~A~----~~~ 183 (361)
T cd03322 126 DIPELLEAVERHLAQGYRAIRVQL-------PKLF-EAVREKFGFEFHLLHDVH----------HRLTPNQAA----RFG 183 (361)
T ss_pred CHHHHHHHHHHHHHcCCCeEeeCH-------HHHH-HHHHhccCCCceEEEECC----------CCCCHHHHH----HHH
Confidence 456677777888889999765321 2233 344442223444433221 124454332 333
Q ss_pred HHcCCCcccEEEccCCCCCCCHHHHHHHHHHHHHcCCcc-EEEccCCCHHHHHHHhhcCCceEEeeecCccccch-hhhH
Q 025500 119 KRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIK-YIGLSEASPGTIRRAHAVHPITAVQMEWSLWTRDI-EEEI 196 (252)
Q Consensus 119 ~~Lg~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~G~ir-~iGvs~~~~~~l~~~~~~~~~~~~q~~~~~~~~~~-~~~l 196 (252)
+.|. .+++.++..|-.. +-++.+.+|+++..+. ..|=|-++...+.++++...++++|+.....-.-. -..+
T Consensus 184 ~~l~--~~~l~~iEeP~~~----~d~~~~~~L~~~~~~pia~gE~~~~~~~~~~~i~~~a~di~~~d~~~~GGit~~~~i 257 (361)
T cd03322 184 KDVE--PYRLFWMEDPTPA----ENQEAFRLIRQHTATPLAVGEVFNSIWDWQNLIQERLIDYIRTTVSHAGGITPARKI 257 (361)
T ss_pred HHhh--hcCCCEEECCCCc----ccHHHHHHHHhcCCCCEEeccCCcCHHHHHHHHHhCCCCEEecCccccCCHHHHHHH
Confidence 3332 3467777777543 2377788888887665 66777788999999998888999999877644221 2789
Q ss_pred HHHHHHhCCeEEecccC
Q 025500 197 IPLCRELGIGIVPYSPL 213 (252)
Q Consensus 197 ~~~~~~~gi~v~a~spl 213 (252)
.+.|+++|+.++..+..
T Consensus 258 a~~A~~~gi~~~~h~~~ 274 (361)
T cd03322 258 ADLASLYGVRTGWHGPT 274 (361)
T ss_pred HHHHHHcCCeeeccCCC
Confidence 99999999999876543
|
coli and its homologs are lactonizing enzymes whose putative targets are homoserine lactone (HSL)-derivative. They are part of the mandelate racemase (MR)-like subfamily of the enolase superfamily. Enzymes of this subfamily share three conserved carboxylate ligands for the essential divalent metal ion (usually Mg2+), two aspartates and a glutamate, and catalytic residues, a partially conserved Lys-X-Lys motif and a conserved histidine-aspartate dyad. |
| >TIGR01502 B_methylAsp_ase methylaspartate ammonia-lyase | Back alignment and domain information |
|---|
Probab=87.94 E-value=9.4 Score=34.95 Aligned_cols=106 Identities=10% Similarity=-0.049 Sum_probs=72.5
Q ss_pred CChHHHHHHHHHHHHHcCCCcccEEEccCCCCCCCHHHHHHHHHHHHHc------CCccEEEccCCCHHHHHHHhhcCCc
Q 025500 105 GAPDYVRSCCEASLKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEE------GKIKYIGLSEASPGTIRRAHAVHPI 178 (252)
Q Consensus 105 ~~~~~i~~~~~~sL~~Lg~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~------G~ir~iGvs~~~~~~l~~~~~~~~~ 178 (252)
++++...+-+.+. ++...+ +++ ++..|-...+.++.++.+.+|+++ ..--..+=+-++.+.+.++++....
T Consensus 245 ~~~~~ai~~l~~l-~~~~~~-~~~-~iEqPv~~~d~~~~~e~la~Lr~~~~~~~~~vPI~aDEs~~t~~d~~~~i~~~a~ 321 (408)
T TIGR01502 245 VDIKAMADYIQTL-AEAAKP-FHL-RIEGPMDVGSRQAQIEAMADLRAELDGRGVDAEIVADEWCNTVEDVKFFTDAKAG 321 (408)
T ss_pred CCHHHHHHHHHHH-HHhCcc-CCe-EEecCCCCCcchhhHHHHHHHHHHhhcCCCCceEEecCCCCCHHHHHHHHHhCCC
Confidence 5665555433332 221111 345 788886554445667888888766 4444556666789999999988889
Q ss_pred eEEeeecCccccchh-hhHHHHHHHhCCeEEecccC
Q 025500 179 TAVQMEWSLWTRDIE-EEIIPLCRELGIGIVPYSPL 213 (252)
Q Consensus 179 ~~~q~~~~~~~~~~~-~~l~~~~~~~gi~v~a~spl 213 (252)
+++|+..+-.-.-.+ .++.++|+++||.++..+..
T Consensus 322 d~v~iK~~k~GGIt~a~kia~lA~~~Gi~~~~g~~~ 357 (408)
T TIGR01502 322 HMVQIKTPDVGGVNNIARAIMYCKANGMGAYVGGTC 357 (408)
T ss_pred CEEEeCccccCCHHHHHHHHHHHHHcCCEEEEeCCC
Confidence 999998876543222 78999999999999987765
|
This model describes methylaspartate ammonia-lyase, also called beta-methylaspartase (EC 4.3.1.2). It follows methylaspartate mutase (composed of S and E subunits) in one of several possible pathways of glutamate fermentation. |
| >TIGR02534 mucon_cyclo muconate and chloromuconate cycloisomerases | Back alignment and domain information |
|---|
Probab=87.00 E-value=22 Score=31.82 Aligned_cols=156 Identities=10% Similarity=0.041 Sum_probs=90.2
Q ss_pred HHHHHHHHHHH-HCCCCEEeCcCCcCCCcHHHHHHHHHhcCCCCCEEEEeccCccCCCCcccccCCChHHHHHHHHHHHH
Q 025500 41 EDGISMIKHAF-SKGITFFDTADVYGQNANEVLLGKALKQLPREKIQVATKFGIAGIGVAGVIVKGAPDYVRSCCEASLK 119 (252)
Q Consensus 41 ~~~~~~l~~A~-~~Gin~~Dta~~Yg~g~se~~ig~~l~~~~R~~~~i~tK~~~~~~~~~~~~~~~~~~~i~~~~~~sL~ 119 (252)
++..+.+..++ +.|++.|=.--.-.+-..+...=+++++.-.+++.+.--.. ..++++...+ +-+.|+
T Consensus 143 ~~~~~~~~~~~~~~Gf~~~KiKvg~~~~~~d~~~v~~~re~~g~~~~l~~DaN----------~~~~~~~A~~-~~~~l~ 211 (368)
T TIGR02534 143 DRDIAEAEERIEEKRHRSFKLKIGARDPADDVAHVVAIAKALGDRASVRVDVN----------AAWDERTALH-YLPQLA 211 (368)
T ss_pred HHHHHHHHHHHHhcCcceEEEEeCCCCcHHHHHHHHHHHHhcCCCcEEEEECC----------CCCCHHHHHH-HHHHHH
Confidence 33344455565 47999875421100001222233455542233444332221 1244544332 223344
Q ss_pred HcCCCcccEEEccCCCCCCCHHHHHHHHHHHHHcCCcc-EEEccCCCHHHHHHHhhcCCceEEeeecCccccch-hhhHH
Q 025500 120 RLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIK-YIGLSEASPGTIRRAHAVHPITAVQMEWSLWTRDI-EEEII 197 (252)
Q Consensus 120 ~Lg~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~G~ir-~iGvs~~~~~~l~~~~~~~~~~~~q~~~~~~~~~~-~~~l~ 197 (252)
.+ ++.++..|-.. +.++.+.++++...+. ..|=+-++..++.++++....+++|+..+..-.-. -..+.
T Consensus 212 ~~-----~~~~iEeP~~~----~d~~~~~~l~~~~~~pia~dE~~~~~~~~~~~~~~~~~d~~~~d~~~~GGi~~~~~i~ 282 (368)
T TIGR02534 212 DA-----GVELIEQPTPA----ENREALARLTRRFNVPIMADESVTGPADALAIAKASAADVFALKTTKSGGLLESKKIA 282 (368)
T ss_pred hc-----ChhheECCCCc----ccHHHHHHHHHhCCCCEEeCcccCCHHHHHHHHHhCCCCEEEEcccccCCHHHHHHHH
Confidence 43 55566666443 2367777888776655 66777788889999888778899999877644321 26799
Q ss_pred HHHHHhCCeEEecccCccc
Q 025500 198 PLCRELGIGIVPYSPLGRG 216 (252)
Q Consensus 198 ~~~~~~gi~v~a~spl~~G 216 (252)
..|+.+|+.++..+.+.+|
T Consensus 283 ~lA~~~gi~~~~~~~~~s~ 301 (368)
T TIGR02534 283 AIAEAAGIALYGGTMLEGP 301 (368)
T ss_pred HHHHHcCCceeeecchhhH
Confidence 9999999999876555444
|
This model encompasses muconate cycloisomerase (EC 5.5.1.1) and chloromuconate cycloisomerase (EC 5.5.1.7), enzymes that often overlap in specificity. It excludes more distantly related proteins such as mandelate racemase (5.1.2.2). |
| >PF04476 DUF556: Protein of unknown function (DUF556); InterPro: IPR007565 The proteins in this entry are functionally uncharacterised | Back alignment and domain information |
|---|
Probab=86.51 E-value=13 Score=31.22 Aligned_cols=153 Identities=17% Similarity=0.186 Sum_probs=86.5
Q ss_pred CHHHHHHHHHHHHHCCCCEEeCcCCc-CC-Cc-HHHHHHHHHhcCCCCCEEEEeccCccCCCCcccccCCChHHHHHHHH
Q 025500 39 SEEDGISMIKHAFSKGITFFDTADVY-GQ-NA-NEVLLGKALKQLPREKIQVATKFGIAGIGVAGVIVKGAPDYVRSCCE 115 (252)
Q Consensus 39 ~~~~~~~~l~~A~~~Gin~~Dta~~Y-g~-g~-se~~ig~~l~~~~R~~~~i~tK~~~~~~~~~~~~~~~~~~~i~~~~~ 115 (252)
+.+|+. .|++.|..+||.-+-- |. |. ....+. .+......+.-||..++-.+ ..+..+..+..
T Consensus 9 ~~~EA~----~a~~~gaDiID~K~P~~GaLGA~~~~vi~-~i~~~~~~~~pvSAtiGDlp---------~~p~~~~~aa~ 74 (235)
T PF04476_consen 9 NVEEAE----EALAGGADIIDLKNPAEGALGALFPWVIR-EIVAAVPGRKPVSATIGDLP---------MKPGTASLAAL 74 (235)
T ss_pred CHHHHH----HHHhCCCCEEEccCCCCCCCCCCCHHHHH-HHHHHcCCCCceEEEecCCC---------CCchHHHHHHH
Confidence 455554 4678899999975422 21 22 344444 33433344477888887544 34555555544
Q ss_pred HHHHHcCCCcccEEEccCCCCCCCHHHHHHH----HHHHHHcCCccEEEccCCC------HHHHHHHhhcCCceEEeee-
Q 025500 116 ASLKRLDVDYIDLYYQHRVDTSVPIEETIGE----MKKLVEEGKIKYIGLSEAS------PGTIRRAHAVHPITAVQME- 184 (252)
Q Consensus 116 ~sL~~Lg~d~iDl~~lh~~~~~~~~~~~~~~----L~~l~~~G~ir~iGvs~~~------~~~l~~~~~~~~~~~~q~~- 184 (252)
..- ..|+||+-+=+....+.. ...+.|+. +.+.-.+.++-.++.+++. +-.+-++.....|+.++++
T Consensus 75 ~~a-~~GvdyvKvGl~g~~~~~-~a~e~l~~v~~av~~~~~~~~vVAv~yAD~~r~~~~~p~~l~~~a~~aG~~gvMlDT 152 (235)
T PF04476_consen 75 GAA-ATGVDYVKVGLFGCKDYD-EAIEALEAVVRAVKDFDPDKKVVAVGYADAQRVGSISPLDLPEIAAEAGFDGVMLDT 152 (235)
T ss_pred HHH-hcCCCEEEEecCCCCCHH-HHHHHHHHHHHHHhhhCCCcEEEEEEecchhhhcCCCHHHHHHHHHHcCCCEEEEec
Confidence 443 469999998887443322 11223322 2222234567788888874 3344444444557777774
Q ss_pred -----cCccccc---hhhhHHHHHHHhCCeE
Q 025500 185 -----WSLWTRD---IEEEIIPLCRELGIGI 207 (252)
Q Consensus 185 -----~~~~~~~---~~~~l~~~~~~~gi~v 207 (252)
-++++.- .-.++++.|+++|+.+
T Consensus 153 a~Kdg~~L~d~~~~~~L~~Fv~~ar~~gL~~ 183 (235)
T PF04476_consen 153 ADKDGGSLFDHLSEEELAEFVAQARAHGLMC 183 (235)
T ss_pred ccCCCCchhhcCCHHHHHHHHHHHHHccchh
Confidence 2333332 2267888899999853
|
|
| >PRK07945 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=86.20 E-value=24 Score=31.37 Aligned_cols=108 Identities=18% Similarity=0.160 Sum_probs=56.7
Q ss_pred HHHHHHHHHHHHHCCCCEEeCcCCcCC-----CcHHHHHHHHHhc---CCC--CCEEEEeccCccCCCCcccccCCChHH
Q 025500 40 EEDGISMIKHAFSKGITFFDTADVYGQ-----NANEVLLGKALKQ---LPR--EKIQVATKFGIAGIGVAGVIVKGAPDY 109 (252)
Q Consensus 40 ~~~~~~~l~~A~~~Gin~~Dta~~Yg~-----g~se~~ig~~l~~---~~R--~~~~i~tK~~~~~~~~~~~~~~~~~~~ 109 (252)
.....+++++|.+.|+..+=.++|... +.+.+.+-..+.. .++ .++.| +.|... +..++.+.+.
T Consensus 110 ~~~~ee~v~~Ai~~Gl~~i~~TDH~p~~~~~~~~~~~~l~~y~~~i~~l~~ky~~I~I--l~GiE~----d~~~~g~~~~ 183 (335)
T PRK07945 110 GSPIEEMARTAAALGHEYCALTDHSPRLTVANGLSAERLRKQLDVVAELNEELAPFRI--LTGIEV----DILDDGSLDQ 183 (335)
T ss_pred CCCHHHHHHHHHHCCCCEEEEeCCCCCccCCCCCCHHHHHHHHHHHHHHHHhcCCceE--EEEeEe----cccCCCCcch
Confidence 345789999999999998877766421 1122222222221 111 12333 222211 0011112222
Q ss_pred HHHHHHHHHHHcCCCcccEEEccCCCCCCCHHHHHHHHHHHHHcCCccEEEc
Q 025500 110 VRSCCEASLKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGL 161 (252)
Q Consensus 110 i~~~~~~sL~~Lg~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~G~ir~iGv 161 (252)
. ++.|+. .||+ +..+|+... .+..+..+.|.++.+.+.+..||=
T Consensus 184 ~----~~~l~~--~D~v-IgSvH~~~~-~~~~~~~~~l~~ai~~~~~dvlgH 227 (335)
T PRK07945 184 E----PELLDR--LDVV-VASVHSKLR-MDAAAMTRRMLAAVANPHTDVLGH 227 (335)
T ss_pred h----HHHHHh--CCEE-EEEeecCCC-CCHHHHHHHHHHHhcCCCCeEEec
Confidence 2 333443 4665 777798643 334566788888888888888874
|
|
| >PRK13958 N-(5'-phosphoribosyl)anthranilate isomerase; Provisional | Back alignment and domain information |
|---|
Probab=85.01 E-value=4 Score=33.65 Aligned_cols=67 Identities=15% Similarity=0.198 Sum_probs=47.2
Q ss_pred HHHHcCCCcccEEEccCCCCCCCHHHHHHHHHHHHHcCCccEEEcc-CCCHHHHHHHhhcCCceEEeeec
Q 025500 117 SLKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLS-EASPGTIRRAHAVHPITAVQMEW 185 (252)
Q Consensus 117 sL~~Lg~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~G~ir~iGvs-~~~~~~l~~~~~~~~~~~~q~~~ 185 (252)
.+..+|.|++=+.+........+.+.+ ..+.+.. .+.++.+||. |.+++.+.++.+...++++|+.-
T Consensus 16 ~~~~~GaD~iGfIf~~~SpR~V~~~~a-~~i~~~~-~~~~~~VgVf~~~~~~~i~~~~~~~~~d~vQLHG 83 (207)
T PRK13958 16 AASQLPIDAIGFIHYEKSKRHQTITQI-KKLASAV-PNHIDKVCVVVNPDLTTIEHILSNTSINTIQLHG 83 (207)
T ss_pred HHHHcCCCEEEEecCCCCcccCCHHHH-HHHHHhC-CCCCCEEEEEeCCCHHHHHHHHHhCCCCEEEECC
Confidence 466799999999865544444444433 3333322 3568889996 78889999999888999999953
|
|
| >PRK08609 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=84.78 E-value=9.9 Score=36.40 Aligned_cols=148 Identities=18% Similarity=0.218 Sum_probs=78.3
Q ss_pred HHHHHHHHHHCCCCEEeCcCCcC-----CCcHHHHHHHH------Hhc-CCCCCEEEEeccCccCCCCcccccCCChHHH
Q 025500 43 GISMIKHAFSKGITFFDTADVYG-----QNANEVLLGKA------LKQ-LPREKIQVATKFGIAGIGVAGVIVKGAPDYV 110 (252)
Q Consensus 43 ~~~~l~~A~~~Gin~~Dta~~Yg-----~g~se~~ig~~------l~~-~~R~~~~i~tK~~~~~~~~~~~~~~~~~~~i 110 (252)
..++++.|.+.|+..|=.++|+. .|.+...+-.. +++ ...=+|+...-+.... +..
T Consensus 351 leemv~~A~~~Gl~~i~iTdH~~~~~~~~~~~~~~l~~~~~ei~~l~~~~~~i~Il~GiEv~i~~------------~g~ 418 (570)
T PRK08609 351 IEEMVEACIAKGYEYMAITDHSQYLKVANGLTEERLLEQAEEIKALNEKYPEIDILSGIEMDILP------------DGS 418 (570)
T ss_pred HHHHHHHHHHCCCCEEEEeCCCCCccccCCCCHHHHHHHHHHHHHHHHhcCCCeEEEEEEEeecC------------Ccc
Confidence 55699999999999998888862 12223222222 221 1111233333332211 111
Q ss_pred HHHHHHHHHHcCCCcccEEEccCCCCCCCHHHHHHHHHHHHHcCCccEEEccC------CC--HHHHHHH----hhcCCc
Q 025500 111 RSCCEASLKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSE------AS--PGTIRRA----HAVHPI 178 (252)
Q Consensus 111 ~~~~~~sL~~Lg~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~G~ir~iGvs~------~~--~~~l~~~----~~~~~~ 178 (252)
.+-.+..|+. .||+ +.-+|++. ..+.+++++.+.++.+.|.+.-||=-. .. ...++++ .+.+
T Consensus 419 ~d~~~~~L~~--~D~v-I~SvH~~~-~~~~~~~~~~l~~a~~~~~~dILaHpd~rli~~~~~~~~d~~~i~~~a~~~G-- 492 (570)
T PRK08609 419 LDYDDEVLAE--LDYV-IAAIHSSF-SQSEEEIMKRLENACRNPYVRLIAHPTGRLIGRRDGYDVNIDQLIELAKETN-- 492 (570)
T ss_pred hhhcHHHHHh--hCEE-EEEeecCC-CCCHHHHHHHHHHHhcCCCceEEECCCccccccCCCchHHHHHHHHHHHHhC--
Confidence 2222334444 4665 77778753 234567788888888888887776443 11 1122222 2222
Q ss_pred eEEeeecCccccchhhhHHHHHHHhCCeEE
Q 025500 179 TAVQMEWSLWTRDIEEEIIPLCRELGIGIV 208 (252)
Q Consensus 179 ~~~q~~~~~~~~~~~~~l~~~~~~~gi~v~ 208 (252)
.++|++-+.+.......++..|++.|+.++
T Consensus 493 ~~lEINa~~~r~~~~~~~~~~~~e~Gv~i~ 522 (570)
T PRK08609 493 TALELNANPNRLDLSAEHLKKAQEAGVKLA 522 (570)
T ss_pred CEEEEcCCccccCccHHHHHHHHHcCCEEE
Confidence 234454444333333678888888887654
|
|
| >PRK13796 GTPase YqeH; Provisional | Back alignment and domain information |
|---|
Probab=83.78 E-value=31 Score=31.01 Aligned_cols=138 Identities=14% Similarity=0.199 Sum_probs=89.6
Q ss_pred ceeecccccCCCCCC----CCCHHHHHHHHHHHHHCC---CCEEeCcCCcCCCcHHHHHHHHHhcCCCCCEEEEeccCcc
Q 025500 22 KLGYGCMNLSGGYSS----PVSEEDGISMIKHAFSKG---ITFFDTADVYGQNANEVLLGKALKQLPREKIQVATKFGIA 94 (252)
Q Consensus 22 ~lglG~~~~g~~~~~----~~~~~~~~~~l~~A~~~G---in~~Dta~~Yg~g~se~~ig~~l~~~~R~~~~i~tK~~~~ 94 (252)
.+|-=|.++-. |+. ..+.++..++++..-+.- +-.+|..+.-+ .-...+.+... .+.-++|.+|.-..
T Consensus 35 ~~C~RC~~l~h-y~~~~~~~~~~~~~~~~l~~i~~~~~lIv~VVD~~D~~~--s~~~~L~~~~~--~kpviLViNK~DLl 109 (365)
T PRK13796 35 VYCQRCFRLKH-YNEIQDVSLTDDDFLKLLNGIGDSDALVVNVVDIFDFNG--SWIPGLHRFVG--NNPVLLVGNKADLL 109 (365)
T ss_pred eEchhhhhhhc-cCcccCCCCCHHHHHHHHHhhcccCcEEEEEEECccCCC--chhHHHHHHhC--CCCEEEEEEchhhC
Confidence 45555554432 332 246677778888887665 44678666443 23344444443 45668899998653
Q ss_pred CCCCcccccCCChHHHHHHHHHHHHHcCCCcccEEEccCCCCCCCHHHHHHHHHHHHHcCCccEEEccCCCHHHHHHH
Q 025500 95 GIGVAGVIVKGAPDYVRSCCEASLKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPGTIRRA 172 (252)
Q Consensus 95 ~~~~~~~~~~~~~~~i~~~~~~sL~~Lg~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~G~ir~iGvs~~~~~~l~~~ 172 (252)
.. ....+.+.+-++...+.+|....|++.+.... ...++++++.+.+..+.+.+-.||.+|..-..|-..
T Consensus 110 ~~-------~~~~~~i~~~l~~~~k~~g~~~~~v~~vSAk~-g~gI~eL~~~I~~~~~~~~v~vvG~~NvGKSTLiN~ 179 (365)
T PRK13796 110 PK-------SVKKNKVKNWLRQEAKELGLRPVDVVLISAQK-GHGIDELLEAIEKYREGRDVYVVGVTNVGKSTLINR 179 (365)
T ss_pred CC-------ccCHHHHHHHHHHHHHhcCCCcCcEEEEECCC-CCCHHHHHHHHHHhcCCCeEEEEcCCCCcHHHHHHH
Confidence 21 13455666666777777887656777776543 356788888888887778899999999987765444
|
|
| >PRK05692 hydroxymethylglutaryl-CoA lyase; Provisional | Back alignment and domain information |
|---|
Probab=83.19 E-value=8.7 Score=33.36 Aligned_cols=102 Identities=12% Similarity=0.044 Sum_probs=63.0
Q ss_pred CChHHHHHHHHHHHHHcCCCcccEEEccCCCCCCCHHHHHHHHHHHHHcCCccEEEccCCCHHHHHHHhhcCCceEEeee
Q 025500 105 GAPDYVRSCCEASLKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPGTIRRAHAVHPITAVQME 184 (252)
Q Consensus 105 ~~~~~i~~~~~~sL~~Lg~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~G~ir~iGvs~~~~~~l~~~~~~~~~~~~q~~ 184 (252)
++.+.. ..+-+.|.++|+++|++-.+.+|.......+.++.+..+.+...++...+. .+...++++.+.. ++.+.+-
T Consensus 23 ~s~e~k-~~ia~~L~~~Gv~~IEvgsf~~p~~~p~~~d~~e~~~~l~~~~~~~~~~l~-~~~~~ie~A~~~g-~~~v~i~ 99 (287)
T PRK05692 23 IPTADK-IALIDRLSAAGLSYIEVASFVSPKWVPQMADAAEVMAGIQRRPGVTYAALT-PNLKGLEAALAAG-ADEVAVF 99 (287)
T ss_pred cCHHHH-HHHHHHHHHcCCCEEEeCCCcCcccccccccHHHHHHhhhccCCCeEEEEe-cCHHHHHHHHHcC-CCEEEEE
Confidence 444444 456677999999999998666664333333456666776655456655554 4778888887752 2333332
Q ss_pred cCccc--------cc------hhhhHHHHHHHhCCeEEe
Q 025500 185 WSLWT--------RD------IEEEIIPLCRELGIGIVP 209 (252)
Q Consensus 185 ~~~~~--------~~------~~~~l~~~~~~~gi~v~a 209 (252)
++.-+ .. .-.+.+++++++|+.+.+
T Consensus 100 ~~~s~~~~~~n~~~~~~e~l~~~~~~v~~ak~~g~~v~~ 138 (287)
T PRK05692 100 ASASEAFSQKNINCSIAESLERFEPVAEAAKQAGVRVRG 138 (287)
T ss_pred EecCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCEEEE
Confidence 22211 11 115789999999999864
|
|
| >PRK00164 moaA molybdenum cofactor biosynthesis protein A; Reviewed | Back alignment and domain information |
|---|
Probab=83.18 E-value=31 Score=30.26 Aligned_cols=150 Identities=14% Similarity=0.136 Sum_probs=81.9
Q ss_pred CCHHHHHHHHHHHHHCCCCEEeCcCCcCCC----cHHHHHHHHHhcC-CCCCEEEEeccCccCCCCcccccCCChHHHHH
Q 025500 38 VSEEDGISMIKHAFSKGITFFDTADVYGQN----ANEVLLGKALKQL-PREKIQVATKFGIAGIGVAGVIVKGAPDYVRS 112 (252)
Q Consensus 38 ~~~~~~~~~l~~A~~~Gin~~Dta~~Yg~g----~se~~ig~~l~~~-~R~~~~i~tK~~~~~~~~~~~~~~~~~~~i~~ 112 (252)
.+.++..++++.+.+.|++.|.-+. |.- .-.+++.. +++. .-.++.|+|-... +.+
T Consensus 49 ls~eei~~~i~~~~~~gi~~I~~tG--GEPll~~~l~~li~~-i~~~~~~~~i~itTNG~l----------------l~~ 109 (331)
T PRK00164 49 LSLEEIERLVRAFVALGVRKVRLTG--GEPLLRKDLEDIIAA-LAALPGIRDLALTTNGYL----------------LAR 109 (331)
T ss_pred CCHHHHHHHHHHHHHCCCCEEEEEC--CCCcCccCHHHHHHH-HHhcCCCceEEEEcCchh----------------HHH
Confidence 5789999999999999998877432 210 11222222 2222 1235666655321 112
Q ss_pred HHHHHHHHcCCCcccEEEccCCCC--------CCCHHHHHHHHHHHHHcCC----ccEEEccCCCHHHHHHHhhc---CC
Q 025500 113 CCEASLKRLDVDYIDLYYQHRVDT--------SVPIEETIGEMKKLVEEGK----IKYIGLSEASPGTIRRAHAV---HP 177 (252)
Q Consensus 113 ~~~~sL~~Lg~d~iDl~~lh~~~~--------~~~~~~~~~~L~~l~~~G~----ir~iGvs~~~~~~l~~~~~~---~~ 177 (252)
. -..|...|++.+- +-+|..+. ...++.++++++.+++.|. +..+.+.+.+.+.+.++.+. ..
T Consensus 110 ~-~~~L~~agl~~i~-ISlds~~~e~~~~i~~~~~~~~vl~~i~~~~~~g~~~v~i~~vv~~g~n~~ei~~l~~~~~~~g 187 (331)
T PRK00164 110 R-AAALKDAGLDRVN-VSLDSLDPERFKAITGRDRLDQVLAGIDAALAAGLTPVKVNAVLMKGVNDDEIPDLLEWAKDRG 187 (331)
T ss_pred H-HHHHHHcCCCEEE-EEeccCCHHHhccCCCCCCHHHHHHHHHHHHHCCCCcEEEEEEEECCCCHHHHHHHHHHHHhCC
Confidence 2 2334555665443 34454432 2357889999999999885 33444445555555554433 34
Q ss_pred ceEEeeecCccccc---------hhhhHHHHHHHhCCeEE
Q 025500 178 ITAVQMEWSLWTRD---------IEEEIIPLCRELGIGIV 208 (252)
Q Consensus 178 ~~~~q~~~~~~~~~---------~~~~l~~~~~~~gi~v~ 208 (252)
+.+.-++|.+.... ...++++..+++|+.+.
T Consensus 188 v~v~~ie~~p~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 227 (331)
T PRK00164 188 IQLRFIELMPTGEGNEWFRKHHLSGAEIRARLAERGWTLQ 227 (331)
T ss_pred CeEEEEEeeECCCCcchhhhcCCCHHHHHHHHHhccCccc
Confidence 55555555543321 11567777777765543
|
|
| >PLN02428 lipoic acid synthase | Back alignment and domain information |
|---|
Probab=82.36 E-value=25 Score=31.51 Aligned_cols=158 Identities=13% Similarity=0.214 Sum_probs=86.8
Q ss_pred CCHHHHHHHHHHHHHCCCCEEeCc-C---CcCCCcHHHHHHHHHhcCCC--CCEEEEeccCccCCCCcccccCCChHHHH
Q 025500 38 VSEEDGISMIKHAFSKGITFFDTA-D---VYGQNANEVLLGKALKQLPR--EKIQVATKFGIAGIGVAGVIVKGAPDYVR 111 (252)
Q Consensus 38 ~~~~~~~~~l~~A~~~Gin~~Dta-~---~Yg~g~se~~ig~~l~~~~R--~~~~i~tK~~~~~~~~~~~~~~~~~~~i~ 111 (252)
.+.++..++.+.+.+.|++++=.. . .|-++..+ .+.+.++.+.+ .++.|..=. + . ...+
T Consensus 130 ~d~~Ep~~vA~~v~~~Glk~vvltSg~rddl~D~ga~-~~~elir~Ir~~~P~i~Ie~L~-p-d-------f~~d----- 194 (349)
T PLN02428 130 PDPDEPENVAEAIASWGVDYVVLTSVDRDDLPDGGSG-HFAETVRRLKQLKPEILVEALV-P-D-------FRGD----- 194 (349)
T ss_pred CChhhHHHHHHHHHHcCCCEEEEEEcCCCCCCcccHH-HHHHHHHHHHHhCCCcEEEEeC-c-c-------ccCC-----
Confidence 466777888888889999865432 1 23332232 33344443222 133333311 1 1 0011
Q ss_pred HHHHHHHHHcCCCcccEEEccCCCC-----------CCCHHHHHHHHHHHHHc--CCcc----EEEccCCCHHHHHHHhh
Q 025500 112 SCCEASLKRLDVDYIDLYYQHRVDT-----------SVPIEETIGEMKKLVEE--GKIK----YIGLSEASPGTIRRAHA 174 (252)
Q Consensus 112 ~~~~~sL~~Lg~d~iDl~~lh~~~~-----------~~~~~~~~~~L~~l~~~--G~ir----~iGvs~~~~~~l~~~~~ 174 (252)
+.+-+.|..-| +|. +-|+++. ....++.++.|+.+++. |..- -+|+ +-+.+++.+.+.
T Consensus 195 ~elL~~L~eAG---~d~-i~hnlETv~rL~~~Ir~~~~sye~~Le~L~~ak~~~pGi~tkSg~MvGL-GET~Edv~e~l~ 269 (349)
T PLN02428 195 LGAVETVATSG---LDV-FAHNIETVERLQRIVRDPRAGYKQSLDVLKHAKESKPGLLTKTSIMLGL-GETDEEVVQTME 269 (349)
T ss_pred HHHHHHHHHcC---CCE-EccCccCcHHHHHHhcCCCCCHHHHHHHHHHHHHhCCCCeEEEeEEEec-CCCHHHHHHHHH
Confidence 22223333444 455 3366654 13457788999999988 7653 2577 566666655543
Q ss_pred c---CCceE-----------EeeecCccccchh-hhHHHHHHHhCCeEEecccCcc
Q 025500 175 V---HPITA-----------VQMEWSLWTRDIE-EEIIPLCRELGIGIVPYSPLGR 215 (252)
Q Consensus 175 ~---~~~~~-----------~q~~~~~~~~~~~-~~l~~~~~~~gi~v~a~spl~~ 215 (252)
. ..+++ ..++.+.+-+..+ ..+-+++.+.|...++.+||-.
T Consensus 270 ~Lrelgvd~vtigqyL~Ps~~h~~v~~~v~p~~f~~~~~~~~~~gf~~v~sgp~vr 325 (349)
T PLN02428 270 DLRAAGVDVVTFGQYLRPTKRHLPVKEYVTPEKFEFWREYGEEMGFRYVASGPLVR 325 (349)
T ss_pred HHHHcCCCEEeeccccCCCcceeeeecccCHHHHHHHHHHHHHcCCceEEecCccc
Confidence 2 23333 3334444444433 7788889999999999999863
|
|
| >cd03325 D-galactonate_dehydratase D-galactonate dehydratase catalyses the dehydration of galactonate to 2-keto-3-deoxygalactnate (KDGal), as part of the D-galactonate nonphosphorolytic catabolic Entner-Doudoroff pathway | Back alignment and domain information |
|---|
Probab=82.24 E-value=36 Score=30.30 Aligned_cols=153 Identities=12% Similarity=0.068 Sum_probs=92.3
Q ss_pred CHHHHHHHHHHHHHCCCCEEeCcCCcCCC--------cHHHHHHHHHhcCCCCCEEEEeccCccCCCCcccccCCChHHH
Q 025500 39 SEEDGISMIKHAFSKGITFFDTADVYGQN--------ANEVLLGKALKQLPREKIQVATKFGIAGIGVAGVIVKGAPDYV 110 (252)
Q Consensus 39 ~~~~~~~~l~~A~~~Gin~~Dta~~Yg~g--------~se~~ig~~l~~~~R~~~~i~tK~~~~~~~~~~~~~~~~~~~i 110 (252)
+.++..+.+..+.+.|++.|=.--....+ ..+...=+++++.-..++.|..=... .++.+.
T Consensus 123 ~~~~~~~~~~~~~~~Gf~~~KiKvg~~~~~~~~~~~~~~D~~~i~avr~~~g~~~~l~vDaN~----------~~~~~~- 191 (352)
T cd03325 123 RPSDVAEAARARREAGFTAVKMNATEELQWIDTSKKVDAAVERVAALREAVGPDIDIGVDFHG----------RVSKPM- 191 (352)
T ss_pred CHHHHHHHHHHHHHcCCCEEEecCCCCcccCCCHHHHHHHHHHHHHHHHhhCCCCEEEEECCC----------CCCHHH-
Confidence 45666777788889999988754321100 12222334555422223333322211 134433
Q ss_pred HHHHHHHHHHcCCCcccEEEccCCCCCCCHHHHHHHHHHHHHcCCcc-EEEccCCCHHHHHHHhhcCCceEEeeecCccc
Q 025500 111 RSCCEASLKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIK-YIGLSEASPGTIRRAHAVHPITAVQMEWSLWT 189 (252)
Q Consensus 111 ~~~~~~sL~~Lg~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~G~ir-~iGvs~~~~~~l~~~~~~~~~~~~q~~~~~~~ 189 (252)
..+.++.|. ..++.++..|-... .++.+.+|+++.-+. +.|=|.++..++..+++...++++|+.....-
T Consensus 192 ---A~~~~~~l~--~~~i~~iEeP~~~~----d~~~~~~L~~~~~~pia~dEs~~~~~~~~~~~~~~~~d~v~~d~~~~G 262 (352)
T cd03325 192 ---AKDLAKELE--PYRLLFIEEPVLPE----NVEALAEIAARTTIPIATGERLFSRWDFKELLEDGAVDIIQPDISHAG 262 (352)
T ss_pred ---HHHHHHhcc--ccCCcEEECCCCcc----CHHHHHHHHHhCCCCEEecccccCHHHHHHHHHhCCCCEEecCccccC
Confidence 333444442 34566677665432 377888888876555 45556688899999888778899999876543
Q ss_pred cc-hhhhHHHHHHHhCCeEEecc
Q 025500 190 RD-IEEEIIPLCRELGIGIVPYS 211 (252)
Q Consensus 190 ~~-~~~~l~~~~~~~gi~v~a~s 211 (252)
.- .-..+.+.|+++|+.++..+
T Consensus 263 Git~~~~~~~lA~~~gi~~~~h~ 285 (352)
T cd03325 263 GITELKKIAAMAEAYDVALAPHC 285 (352)
T ss_pred CHHHHHHHHHHHHHcCCcEeccC
Confidence 21 12789999999999998765
|
D-galactonate dehydratase belongs to the enolase superfamily of enzymes, characterized by the presence of an enolate anion intermediate which is generated by abstraction of the alpha-proton of the carboxylate substrate by an active site residue and is stabilized by coordination to the essential Mg2+ ion. |
| >cd03321 mandelate_racemase Mandelate racemase (MR) catalyzes the Mg2+-dependent 1,1-proton transfer reaction that interconverts the enantiomers of mandelic acid | Back alignment and domain information |
|---|
Probab=82.00 E-value=37 Score=30.25 Aligned_cols=153 Identities=9% Similarity=0.037 Sum_probs=88.8
Q ss_pred CHHHHHHHHHHHHHCCCCEEeCcCCcCCCcHHHHHHHHHhcCCCCCEEEEeccCccCCCCcccccCCChHHHHHHHHHHH
Q 025500 39 SEEDGISMIKHAFSKGITFFDTADVYGQNANEVLLGKALKQLPREKIQVATKFGIAGIGVAGVIVKGAPDYVRSCCEASL 118 (252)
Q Consensus 39 ~~~~~~~~l~~A~~~Gin~~Dta~~Yg~g~se~~ig~~l~~~~R~~~~i~tK~~~~~~~~~~~~~~~~~~~i~~~~~~sL 118 (252)
+.++..+....+.+.|++.|=.--...+-..+...=+++++.-.+++.|..-... .++.+...+-+ +.|
T Consensus 141 ~~~~~~~~a~~~~~~Gf~~~KiKvg~~~~~~d~~~v~air~~~g~~~~l~vDaN~----------~~~~~~A~~~~-~~l 209 (355)
T cd03321 141 GAKLATERAVTAAEEGFHAVKTKIGYPTADEDLAVVRSIRQAVGDGVGLMVDYNQ----------SLTVPEAIERG-QAL 209 (355)
T ss_pred hHHHHHHHHHHHHHhhhHHHhhhcCCCChHhHHHHHHHHHHhhCCCCEEEEeCCC----------CcCHHHHHHHH-HHH
Confidence 3456666667777788876543211111012223334555433335544433211 24555433322 233
Q ss_pred HHcCCCcccEEEccCCCCCCCHHHHHHHHHHHHHcCCcc-EEEccCCCHHHHHHHhhcCCceEEeeecCccccchh-hhH
Q 025500 119 KRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIK-YIGLSEASPGTIRRAHAVHPITAVQMEWSLWTRDIE-EEI 196 (252)
Q Consensus 119 ~~Lg~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~G~ir-~iGvs~~~~~~l~~~~~~~~~~~~q~~~~~~~~~~~-~~l 196 (252)
+.+ ++.++..|-.. +.++.+.+++++-.|. +.|=+.++...+.++++...++++|+..+..-.-.+ ..+
T Consensus 210 ~~~-----~i~~iEeP~~~----~d~~~~~~l~~~~~ipia~~E~~~~~~~~~~~i~~~~~d~i~~~~~~~GGit~~~~i 280 (355)
T cd03321 210 DQE-----GLTWIEEPTLQ----HDYEGHARIASALRTPVQMGENWLGPEEMFKALSAGACDLVMPDLMKIGGVTGWLRA 280 (355)
T ss_pred HcC-----CCCEEECCCCC----cCHHHHHHHHHhcCCCEEEcCCCcCHHHHHHHHHhCCCCeEecCHhhhCCHHHHHHH
Confidence 444 45566666433 2467778888775433 445555888999999888889999998776543222 679
Q ss_pred HHHHHHhCCeEEecc
Q 025500 197 IPLCRELGIGIVPYS 211 (252)
Q Consensus 197 ~~~~~~~gi~v~a~s 211 (252)
.+.|+++|+.++...
T Consensus 281 a~~A~~~gi~~~~h~ 295 (355)
T cd03321 281 SALAEQAGIPMSSHL 295 (355)
T ss_pred HHHHHHcCCeecccc
Confidence 999999999987554
|
MR is the first enzyme in the bacterial pathway that converts mandelic acid to benzoic acid and allows this pathway to utilize either enantiomer of mandelate. MR belongs to the enolase superfamily of enzymes, characterized by the presence of an enolate anion intermediate which is generated by abstraction of the alpha-proton of the carboxylate substrate by an active site residue and is stabilized by coordination to the essential Mg2+ ion. |
| >cd03327 MR_like_2 Mandelate racemase (MR)-like subfamily of the enolase superfamily, subgroup 2 | Back alignment and domain information |
|---|
Probab=81.83 E-value=37 Score=30.10 Aligned_cols=152 Identities=14% Similarity=0.123 Sum_probs=90.9
Q ss_pred CHHHHHHHHHHHHHCCCCEEeCcCCcCC--C-----cHHHHHHHHHhcCCCCCEEEEeccCccCCCCcccccCCChHHHH
Q 025500 39 SEEDGISMIKHAFSKGITFFDTADVYGQ--N-----ANEVLLGKALKQLPREKIQVATKFGIAGIGVAGVIVKGAPDYVR 111 (252)
Q Consensus 39 ~~~~~~~~l~~A~~~Gin~~Dta~~Yg~--g-----~se~~ig~~l~~~~R~~~~i~tK~~~~~~~~~~~~~~~~~~~i~ 111 (252)
+.++..+..+.+.+.|++.|=.--..+. + ...+.+ +++++.-..++-|..-.. ..++++...
T Consensus 120 ~~~~~~~~a~~~~~~Gf~~~Kikvg~~~~~~~~~~~~d~~~v-~avr~~~g~~~~l~vDan----------~~~~~~~A~ 188 (341)
T cd03327 120 DLDELPDEAKEYLKEGYRGMKMRFGYGPSDGHAGLRKNVELV-RAIREAVGYDVDLMLDCY----------MSWNLNYAI 188 (341)
T ss_pred CHHHHHHHHHHHHHcCCCEEEECCCCCCCcchHHHHHHHHHH-HHHHHHhCCCCcEEEECC----------CCCCHHHHH
Confidence 5666777888888999998764321111 0 112222 334432112332322111 123444333
Q ss_pred HHHHHHHHHcCCCcccEEEccCCCCCCCHHHHHHHHHHHHHcCCcc-EEEccCCCHHHHHHHhhcCCceEEeeecCcccc
Q 025500 112 SCCEASLKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIK-YIGLSEASPGTIRRAHAVHPITAVQMEWSLWTR 190 (252)
Q Consensus 112 ~~~~~sL~~Lg~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~G~ir-~iGvs~~~~~~l~~~~~~~~~~~~q~~~~~~~~ 190 (252)
+.+++|. .+++.++..|-... .++.+.+++++..+. +.|=+-++...+.++++....+++|+..+..-.
T Consensus 189 ----~~~~~l~--~~~~~~iEeP~~~~----d~~~~~~l~~~~~~pIa~gE~~~~~~~~~~~i~~~a~d~i~~d~~~~GG 258 (341)
T cd03327 189 ----KMARALE--KYELRWIEEPLIPD----DIEGYAELKKATGIPISTGEHEYTVYGFKRLLEGRAVDILQPDVNWVGG 258 (341)
T ss_pred ----HHHHHhh--hcCCccccCCCCcc----CHHHHHHHHhcCCCCeEeccCccCHHHHHHHHHcCCCCEEecCccccCC
Confidence 2333332 24666777765432 366777888876665 556566888999999988889999998776543
Q ss_pred ch-hhhHHHHHHHhCCeEEecc
Q 025500 191 DI-EEEIIPLCRELGIGIVPYS 211 (252)
Q Consensus 191 ~~-~~~l~~~~~~~gi~v~a~s 211 (252)
-. -..+.+.|+++|+.++..+
T Consensus 259 it~~~~i~~~A~~~g~~~~~h~ 280 (341)
T cd03327 259 ITELKKIAALAEAYGVPVVPHA 280 (341)
T ss_pred HHHHHHHHHHHHHcCCeecccc
Confidence 22 2789999999999988764
|
Enzymes of this subgroup share three conserved carboxylate ligands for the essential divalent metal ion (usually Mg2+), two aspartates and a glutamate, and conserved catalytic residues, a Lys-X-Lys motif and a conserved histidine-aspartate dyad. This subgroup's function is unknown. |
| >cd03314 MAL Methylaspartate ammonia lyase (3-methylaspartase, MAL) is a homodimeric enzyme, catalyzing the magnesium-dependent reversible alpha,beta-elimination of ammonia from L-threo-(2S,3S)-3-methylaspartic acid to mesaconic acid | Back alignment and domain information |
|---|
Probab=81.72 E-value=17 Score=32.83 Aligned_cols=85 Identities=16% Similarity=0.036 Sum_probs=62.8
Q ss_pred EEEccCCCCCCCHHHHHHHHHHHHHc------CCccEEEccCCCHHHHHHHhhcCCceEEeeecCccccchh-hhHHHHH
Q 025500 128 LYYQHRVDTSVPIEETIGEMKKLVEE------GKIKYIGLSEASPGTIRRAHAVHPITAVQMEWSLWTRDIE-EEIIPLC 200 (252)
Q Consensus 128 l~~lh~~~~~~~~~~~~~~L~~l~~~------G~ir~iGvs~~~~~~l~~~~~~~~~~~~q~~~~~~~~~~~-~~l~~~~ 200 (252)
++++..|-...+..+.++.+.+++++ +.--..|=+.++...+.++++....+++|+..+-.-.-.+ ..+.+.|
T Consensus 229 ~~~iEqP~~~~d~~~~~~~~a~Lr~~~~~~~~~iPIa~dEs~~t~~d~~~li~~~a~div~~kl~k~GGIt~a~kia~lA 308 (369)
T cd03314 229 PLRIEGPMDAGSREAQIERMAALRAELDRRGVGVRIVADEWCNTLEDIRDFADAGAAHMVQIKTPDLGGIDNTIDAVLYC 308 (369)
T ss_pred cEEEecCCCCCcchhhHHHHHHHHHHhhcCCCCceEEecCCcCCHHHHHHHHHhCCCCEEEecchhcCCHHHHHHHHHHH
Confidence 45777775544333457777788766 4555567677889999999988889999998876543222 7899999
Q ss_pred HHhCCeEEeccc
Q 025500 201 RELGIGIVPYSP 212 (252)
Q Consensus 201 ~~~gi~v~a~sp 212 (252)
+.+|+.++..+.
T Consensus 309 ~a~Gi~~~~h~~ 320 (369)
T cd03314 309 KEHGVGAYLGGS 320 (369)
T ss_pred HHcCCcEEEeCC
Confidence 999999998654
|
This reaction is part of the main catabolic pathway for glutamate. MAL belongs to the enolase superfamily of enzymes, characterized by the presence of an enolate anion intermediate which is generated by abstraction of the alpha-proton of the carboxylate substrate by an active site residue and is stabilized by coordination to the essential Mg2+ ion. |
| >PRK01222 N-(5'-phosphoribosyl)anthranilate isomerase; Provisional | Back alignment and domain information |
|---|
Probab=81.37 E-value=5.9 Score=32.68 Aligned_cols=67 Identities=19% Similarity=0.256 Sum_probs=45.4
Q ss_pred HHHHcCCCcccEEEccCCCCCCCHHHHHHHHHHHHHcCCccEEEcc-CCCHHHHHHHhhcCCceEEeeec
Q 025500 117 SLKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLS-EASPGTIRRAHAVHPITAVQMEW 185 (252)
Q Consensus 117 sL~~Lg~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~G~ir~iGvs-~~~~~~l~~~~~~~~~~~~q~~~ 185 (252)
.+..+|.|++=+.+........+.+.+ ..+.+.. .+.+..+||. +-+++.+.++.+...++++|+.-
T Consensus 18 ~~~~~Gad~iGfI~~~~S~R~V~~~~a-~~i~~~~-~~~i~~VgVf~~~~~~~i~~~~~~~~~d~vQLHg 85 (210)
T PRK01222 18 AAAELGADAIGFVFYPKSPRYVSPEQA-AELAAAL-PPFVKVVGVFVNASDEEIDEIVETVPLDLLQLHG 85 (210)
T ss_pred HHHHcCCCEEEEccCCCCCCcCCHHHH-HHHHHhC-CCCCCEEEEEeCCCHHHHHHHHHhcCCCEEEECC
Confidence 455799999998754443333444333 3332222 3568899998 57888899998888999999943
|
|
| >COG0135 TrpF Phosphoribosylanthranilate isomerase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=81.32 E-value=14 Score=30.56 Aligned_cols=83 Identities=18% Similarity=0.237 Sum_probs=55.3
Q ss_pred HHHHcCCCcccEEEccCCCCCCCHHHHHHHHHHHHHcCC-ccEEEcc-CCCHHHHHHHhhcCCceEEeeecCccccchhh
Q 025500 117 SLKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGK-IKYIGLS-EASPGTIRRAHAVHPITAVQMEWSLWTRDIEE 194 (252)
Q Consensus 117 sL~~Lg~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~G~-ir~iGvs-~~~~~~l~~~~~~~~~~~~q~~~~~~~~~~~~ 194 (252)
....+|.||+=+++.-......+.+. ..++.+.-. ++.+||. |.+.+.+.++++..+++.+|+.-. ...
T Consensus 17 ~a~~~gad~iG~If~~~SpR~Vs~~~----a~~i~~~v~~~~~VgVf~n~~~~~i~~i~~~~~ld~VQlHG~-----e~~ 87 (208)
T COG0135 17 AAAKAGADYIGFIFVPKSPRYVSPEQ----AREIASAVPKVKVVGVFVNESIEEILEIAEELGLDAVQLHGD-----EDP 87 (208)
T ss_pred HHHHcCCCEEEEEEcCCCCCcCCHHH----HHHHHHhCCCCCEEEEECCCCHHHHHHHHHhcCCCEEEECCC-----CCH
Confidence 35678999998888864444444433 333443333 7899997 477888999999899999998433 125
Q ss_pred hHHHHHHHhC-CeEE
Q 025500 195 EIIPLCRELG-IGIV 208 (252)
Q Consensus 195 ~l~~~~~~~g-i~v~ 208 (252)
+.++..++.. +.|+
T Consensus 88 ~~~~~l~~~~~~~v~ 102 (208)
T COG0135 88 EYIDQLKEELGVPVI 102 (208)
T ss_pred HHHHHHHhhcCCceE
Confidence 5666666554 5554
|
|
| >cd00739 DHPS DHPS subgroup of Pterin binding enzymes | Back alignment and domain information |
|---|
Probab=81.31 E-value=17 Score=31.01 Aligned_cols=102 Identities=20% Similarity=0.145 Sum_probs=64.5
Q ss_pred CChHHHHHHHHHHHHHcCCCcccEEEc-cCCCCC-CCHHH----HHHHHHHHHHcCCccEEEccCCCHHHHHHHhhcCCc
Q 025500 105 GAPDYVRSCCEASLKRLDVDYIDLYYQ-HRVDTS-VPIEE----TIGEMKKLVEEGKIKYIGLSEASPGTIRRAHAVHPI 178 (252)
Q Consensus 105 ~~~~~i~~~~~~sL~~Lg~d~iDl~~l-h~~~~~-~~~~~----~~~~L~~l~~~G~ir~iGvs~~~~~~l~~~~~~~~~ 178 (252)
.+.+.+.+..++.+ +-|.+.||+-.- .+|+.. .+.++ +...++.+++.-.+. |.+-+++++.++++++.+..
T Consensus 21 ~~~~~~~~~a~~~~-~~GAdiIDIG~~st~p~~~~i~~~~E~~rl~~~v~~i~~~~~~p-lSIDT~~~~v~e~al~~G~~ 98 (257)
T cd00739 21 LSLDKAVAHAEKMI-AEGADIIDIGGESTRPGADPVSVEEELERVIPVLEALRGELDVL-ISVDTFRAEVARAALEAGAD 98 (257)
T ss_pred CCHHHHHHHHHHHH-HCCCCEEEECCCcCCCCCCCCCHHHHHHHHHHHHHHHHhcCCCc-EEEeCCCHHHHHHHHHhCCC
Confidence 45566666555554 668899999643 234332 22233 333456666553443 88999999999999987633
Q ss_pred eEEeeecCccccchhhhHHHHHHHhCCeEEeccc
Q 025500 179 TAVQMEWSLWTRDIEEEIIPLCRELGIGIVPYSP 212 (252)
Q Consensus 179 ~~~q~~~~~~~~~~~~~l~~~~~~~gi~v~a~sp 212 (252)
-+ +..+....+ ..+++.++++|..++.+..
T Consensus 99 iI--Ndisg~~~~--~~~~~l~~~~~~~vV~m~~ 128 (257)
T cd00739 99 II--NDVSGGSDD--PAMLEVAAEYGAPLVLMHM 128 (257)
T ss_pred EE--EeCCCCCCC--hHHHHHHHHcCCCEEEECC
Confidence 22 333443322 5789999999999999543
|
DHPS (dihydropteroate synthase), a functional homodimer, catalyzes the condensation of p-aminobenzoic acid (pABA) in the de novo biosynthesis of folate, which is an essential cofactor in both nucleic acid and protein biosynthesis. Prokaryotes (and some lower eukaryotes) must synthesize folate de novo, while higher eukaryotes are able to utilize dietary folate and therefore lack DHPS. Sulfonamide drugs, which are substrate analogs of pABA, target DHPS. |
| >cd02069 methionine_synthase_B12_BD B12 binding domain of methionine synthase | Back alignment and domain information |
|---|
Probab=81.15 E-value=28 Score=28.78 Aligned_cols=145 Identities=12% Similarity=-0.016 Sum_probs=83.4
Q ss_pred CHHHHHHHHHHHHHCCCCEEeCcCCcCCCcHHHHHHHHHhc----CCCCCEEEEeccCccCCCCcccccCCChHHHHHHH
Q 025500 39 SEEDGISMIKHAFSKGITFFDTADVYGQNANEVLLGKALKQ----LPREKIQVATKFGIAGIGVAGVIVKGAPDYVRSCC 114 (252)
Q Consensus 39 ~~~~~~~~l~~A~~~Gin~~Dta~~Yg~g~se~~ig~~l~~----~~R~~~~i~tK~~~~~~~~~~~~~~~~~~~i~~~~ 114 (252)
|++.+.++++.|++.|+...|+- ++.+-..+.. ..+.++++.--. ...+.+++.+
T Consensus 13 D~~~~~~~l~~al~~~~~~~~ii--------~~~l~p~m~~vG~~w~~gei~vaqe~-------------~as~~~~~~l 71 (213)
T cd02069 13 IRDGIEEDTEEARQQYARPLEII--------NGPLMDGMKVVGDLFGAGKMFLPQVL-------------KSARVMKAAV 71 (213)
T ss_pred CHHHHHHHHHHHHHcCCCHHHHH--------HHHHHHHHHHHHHHHccCCCcHHHHH-------------HHHHHHHHHH
Confidence 78999999999999987644421 2334444443 345566653221 2344555555
Q ss_pred HHHHHHcCCC-----cccEEEccCCCCCCCHHHHHHHHHHHHHcCC-ccEEEccCCCHHHHHHHhhcCCceEEeeecCcc
Q 025500 115 EASLKRLDVD-----YIDLYYQHRVDTSVPIEETIGEMKKLVEEGK-IKYIGLSEASPGTIRRAHAVHPITAVQMEWSLW 188 (252)
Q Consensus 115 ~~sL~~Lg~d-----~iDl~~lh~~~~~~~~~~~~~~L~~l~~~G~-ir~iGvs~~~~~~l~~~~~~~~~~~~q~~~~~~ 188 (252)
.....++... ..=-+++-.+..+.+--...=.-.-|+..|. |.++|.. .+++.+.++.....++++.+.....
T Consensus 72 ~~l~~~l~~~~~~~~~~~~vvl~t~~gd~HdiG~~iv~~~l~~~G~~Vi~LG~~-vp~e~~v~~~~~~~~~~V~lS~~~~ 150 (213)
T cd02069 72 AYLEPYMEKEKGENSSKGKIVLATVKGDVHDIGKNLVGVILSNNGYEVIDLGVM-VPIEKILEAAKEHKADIIGLSGLLV 150 (213)
T ss_pred HHHHHHHhhccccCCCCCeEEEEeCCCchhHHHHHHHHHHHHhCCCEEEECCCC-CCHHHHHHHHHHcCCCEEEEccchh
Confidence 5553322211 1112333334333332222222234566776 7888864 4667777777777888888887765
Q ss_pred ccchh-hhHHHHHHHhCC
Q 025500 189 TRDIE-EEIIPLCRELGI 205 (252)
Q Consensus 189 ~~~~~-~~l~~~~~~~gi 205 (252)
..... .++++.+++.+.
T Consensus 151 ~~~~~~~~~i~~L~~~~~ 168 (213)
T cd02069 151 PSLDEMVEVAEEMNRRGI 168 (213)
T ss_pred ccHHHHHHHHHHHHhcCC
Confidence 54323 788888888866
|
This domain binds methylcobalamin, which it uses as an intermediate methyl carrier from methyltetrahydrofolate (CH3H4folate) to homocysteine (Hcy). |
| >cd07943 DRE_TIM_HOA 4-hydroxy-2-oxovalerate aldolase, N-terminal catalytic TIM barrel domain | Back alignment and domain information |
|---|
Probab=80.35 E-value=22 Score=30.25 Aligned_cols=104 Identities=16% Similarity=0.166 Sum_probs=61.1
Q ss_pred CChHHHHHHHHHHHHHcCCCcccEEEccCCCC-----CCCHHHHHHHHHHHHHc-CCccEEEcc---CCCHHHHHHHhhc
Q 025500 105 GAPDYVRSCCEASLKRLDVDYIDLYYQHRVDT-----SVPIEETIGEMKKLVEE-GKIKYIGLS---EASPGTIRRAHAV 175 (252)
Q Consensus 105 ~~~~~i~~~~~~sL~~Lg~d~iDl~~lh~~~~-----~~~~~~~~~~L~~l~~~-G~ir~iGvs---~~~~~~l~~~~~~ 175 (252)
++.+... .+-+.|.++|++++++-+...... .......|+.++.+++. +..+...+. ....+.++++.+.
T Consensus 19 ~~~~~k~-~i~~~L~~~Gv~~iEvg~~~~~~~~~~~~~~~~~~~~e~i~~~~~~~~~~~~~~~~~~~~~~~~~i~~a~~~ 97 (263)
T cd07943 19 FTLEQVR-AIARALDAAGVPLIEVGHGDGLGGSSLNYGFAAHTDEEYLEAAAEALKQAKLGVLLLPGIGTVDDLKMAADL 97 (263)
T ss_pred cCHHHHH-HHHHHHHHcCCCEEEeecCCCCCCcccccCCCCCChHHHHHHHHHhccCCEEEEEecCCccCHHHHHHHHHc
Confidence 4555555 455569999999999985432110 01112246666666443 346666554 3345667777663
Q ss_pred CCceEEeeecCccccchhhhHHHHHHHhCCeEEec
Q 025500 176 HPITAVQMEWSLWTRDIEEEIIPLCRELGIGIVPY 210 (252)
Q Consensus 176 ~~~~~~q~~~~~~~~~~~~~l~~~~~~~gi~v~a~ 210 (252)
.++.+.+-++.-+.....+.+++++++|+.+..+
T Consensus 98 -g~~~iri~~~~s~~~~~~~~i~~ak~~G~~v~~~ 131 (263)
T cd07943 98 -GVDVVRVATHCTEADVSEQHIGAARKLGMDVVGF 131 (263)
T ss_pred -CCCEEEEEechhhHHHHHHHHHHHHHCCCeEEEE
Confidence 4556655444433222377899999999877654
|
4-hydroxy 2-ketovalerate aldolase (Also known as 4-hydroxy-2-ketovalerate aldolase and 4-hydroxy-2-oxopentanoate aldolase (HOA)) converts 4-hydroxy-2-oxopentanoate to acetaldehyde and pyruvate, the penultimate step in the meta-cleavage pathway for the degradation of phenols, cresols and catechol. This family includes the Escherichia coli MhpE aldolase, the Pseudomonas DmpG aldolase, and the Burkholderia xenovorans BphI pyruvate aldolase. In Pseudomonas, the DmpG aldolase tightly associates with a dehydrogenase (DmpF ) and is inactive without it. HOA has a canonical TIM-barrel fold with a C-terminal extension that forms a funnel leading to the active site. This family belongs to the DRE-TIM metallolyase superfamily. DRE-TIM metallolyases include 2-isopropylmalate synthase (IPMS), alpha-isopropylmalate synthase (LeuA), 3-hydroxy-3-methylglutaryl-CoA lyase, homocitrate synthase, citramalate |
| >COG0635 HemN Coproporphyrinogen III oxidase and related Fe-S oxidoreductases [Coenzyme metabolism] | Back alignment and domain information |
|---|
Probab=80.09 E-value=17 Score=33.41 Aligned_cols=109 Identities=18% Similarity=0.254 Sum_probs=67.8
Q ss_pred ccceeecccccCC----CCCCCCCHHHHHHHHHHHHHCCCCEEeCcCCcCCCcHHHHHHHHHhcCCCCCEEEEeccCccC
Q 025500 20 VSKLGYGCMNLSG----GYSSPVSEEDGISMIKHAFSKGITFFDTADVYGQNANEVLLGKALKQLPREKIQVATKFGIAG 95 (252)
Q Consensus 20 vs~lglG~~~~g~----~~~~~~~~~~~~~~l~~A~~~Gin~~Dta~~Yg~g~se~~ig~~l~~~~R~~~~i~tK~~~~~ 95 (252)
|.+|++|..+|.. .-++.-+.+++..++..|-+.|+.-|..-=.||-
T Consensus 148 vNRiSlGVQsf~~~~lk~lgR~h~~~~~~~a~~~~~~~g~~~in~DLIygl----------------------------- 198 (416)
T COG0635 148 VNRISLGVQSFNDEVLKALGRIHDEEEAKEAVELARKAGFTSINIDLIYGL----------------------------- 198 (416)
T ss_pred CCEEEeccccCCHHHHHHhcCCCCHHHHHHHHHHHHHcCCCcEEEEeecCC-----------------------------
Confidence 3488888877654 1233346677788888888888776655555551
Q ss_pred CCCcccccCCChHHHHHHHHHHHHHcCCCcccEEEccC-CCCC----------CC-H---HHHHHHHH-HHHHcCCccEE
Q 025500 96 IGVAGVIVKGAPDYVRSCCEASLKRLDVDYIDLYYQHR-VDTS----------VP-I---EETIGEMK-KLVEEGKIKYI 159 (252)
Q Consensus 96 ~~~~~~~~~~~~~~i~~~~~~sL~~Lg~d~iDl~~lh~-~~~~----------~~-~---~~~~~~L~-~l~~~G~ir~i 159 (252)
+.-+.+.+.+.+++.++ |+.|+|.+|.+-. |... .+ . .+.++... .|.+.|- +.+
T Consensus 199 -------P~QT~~~~~~~l~~a~~-l~pdhis~y~L~~~p~t~~~~~~~~~~~lP~~d~~~~~~~~~~e~L~~~Gy-~~y 269 (416)
T COG0635 199 -------PGQTLESLKEDLEQALE-LGPDHLSLYSLAIEPGTKFAQRKIKGKALPDEDEKADMYELVEELLEKAGY-RQY 269 (416)
T ss_pred -------CCCCHHHHHHHHHHHHh-CCCCEEEEeeeecCCCchhhhhcccCCCCcChHHHHHHHHHHHHHHHHCCC-cEE
Confidence 01356667777776664 6689999998833 3110 11 1 23455444 4556666 999
Q ss_pred EccCCCH
Q 025500 160 GLSEASP 166 (252)
Q Consensus 160 Gvs~~~~ 166 (252)
|+|||..
T Consensus 270 eisnfa~ 276 (416)
T COG0635 270 EISNFAK 276 (416)
T ss_pred eechhcC
Confidence 9999886
|
|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() | |
| Query | 252 | ||||
| 3v0u_A | 338 | Crystal Structure Of Perakine Reductase, Founder Me | 5e-95 | ||
| 3v0t_A | 337 | Crystal Structure Of Perakine Reductase, Founder Me | 5e-95 | ||
| 3uyi_A | 337 | Crystal Structure Of Perakine Reductase, Founder Me | 9e-95 | ||
| 3v0s_A | 337 | Crystal Structure Of Perakine Reductase, Founder Me | 2e-92 | ||
| 1pyf_A | 312 | Structure Of Nadph-Dependent Family 11 Aldo-Keto Re | 2e-29 | ||
| 1ynp_A | 317 | Aldo-keto Reductase Akr11c1 From Bacillus Haloduran | 3e-26 | ||
| 1pz1_A | 333 | Structure Of Nadph-Dependent Family 11 Aldo-Keto Re | 6e-26 | ||
| 3n2t_A | 348 | Structure Of The Glycerol Dehydrogenase Akr11b4 Fro | 6e-23 | ||
| 3eb3_A | 327 | Voltage-Dependent K+ Channel Beta Subunit (W121a) I | 1e-19 | ||
| 1zsx_A | 347 | Crystal Structure Of Human Potassium Channel Kv Bet | 1e-19 | ||
| 1qrq_A | 325 | Structure Of A Voltage-Dependent K+ Channel Beta Su | 2e-19 | ||
| 1exb_A | 332 | Structure Of The Cytoplasmic Beta Subunit-T1 Assemb | 2e-19 | ||
| 3eau_A | 327 | Voltage-Dependent K+ Channel Beta Subunit In Comple | 2e-19 | ||
| 2a79_A | 333 | Mammalian Shaker Kv1.2 Potassium Channel- Beta Subu | 2e-19 | ||
| 3eb4_A | 327 | Voltage-Dependent K+ Channel Beta Subunit (I211r) I | 2e-19 | ||
| 3lut_A | 367 | A Structural Model For The Full-Length Shaker Potas | 2e-19 | ||
| 3erp_A | 353 | Structure Of Idp01002, A Putative Oxidoreductase Fr | 2e-18 | ||
| 4aub_A | 366 | The Complex Structure Of The Bacterial Aldo-Keto Re | 4e-17 | ||
| 3n6q_A | 346 | Crystal Structure Of Yghz From E. Coli Length = 346 | 4e-17 | ||
| 2bp1_B | 360 | Structure Of The Aflatoxin Aldehyde Reductase In Co | 6e-15 | ||
| 2c91_A | 338 | Mouse Succinic Semialdehyde Reductase, Akr7a5 Lengt | 8e-15 | ||
| 1lqa_A | 346 | Tas Protein From Escherichia Coli In Complex With N | 1e-14 | ||
| 2clp_A | 347 | Crystal Structure Of Human Aflatoxin B1 Aldehyde Re | 1e-14 | ||
| 1gve_A | 327 | Aflatoxin Aldehyde Reductase (Akr7a1) From Rat Live | 1e-13 | ||
| 3up8_A | 298 | Crystal Structure Of A Putative 2,5-Diketo-D-Glucon | 3e-11 | ||
| 1og6_A | 298 | Ydhf, An Aldo-keto Reductase From E.coli Complexed | 3e-11 | ||
| 3o0k_A | 283 | Crystal Structure Of AldoKETO REDUCTASE FROM BRUCEL | 1e-10 | ||
| 1ur3_M | 319 | Crystal Structure Of The Apo Form Of The E.Coli Ydh | 2e-10 | ||
| 4gac_A | 324 | High Resolution Structure Of Mouse Aldehyde Reducta | 5e-10 | ||
| 3krb_A | 334 | Structure Of Aldose Reductase From Giardia Lamblia | 1e-08 | ||
| 1qwk_A | 317 | Structural Genomics Of Caenorhabditis Elegans: Hypo | 2e-08 | ||
| 3cv7_A | 325 | Crystal Structure Of Porcine Aldehyde Reductase Ter | 3e-08 | ||
| 1cwn_A | 324 | Crystal Structure Of Porcine Aldehyde Reductase Hol | 3e-08 | ||
| 1ae4_A | 325 | Aldehyde Reductase Complexed With Cofactor And Inhi | 3e-08 | ||
| 2alr_A | 324 | Aldehyde Reductase Length = 324 | 5e-08 | ||
| 1hqt_A | 326 | The Crystal Structure Of An Aldehyde Reductase Y50f | 7e-08 | ||
| 1ye4_A | 322 | Crystal Structure Of The Lys-274 To Arg Mutant Of C | 1e-07 | ||
| 1jez_A | 322 | The Structure Of Xylose Reductase, A Dimeric Aldo-K | 1e-07 | ||
| 1sm9_A | 322 | Crystal Structure Of An Engineered K274rn276d Doubl | 1e-07 | ||
| 1z9a_A | 321 | Crystal Structure Of The Asn-309 To Asp Mutant Of C | 1e-07 | ||
| 2bgq_A | 344 | Apo Aldose Reductase From Barley Length = 344 | 2e-07 | ||
| 1r38_A | 322 | Crystal Structure Of H114a Mutant Of Candida Tenuis | 3e-07 | ||
| 4fzi_A | 290 | Crystal Structure Of Prostaglandin F Synthase From | 3e-07 | ||
| 2wzm_A | 283 | Crystal Structure Of A Mycobacterium Aldo-Keto Redu | 1e-06 | ||
| 1vbj_A | 281 | The Crystal Structure Of Prostaglandin F Synthase F | 3e-06 | ||
| 3h7r_A | 331 | Crystal Structure Of The Plant Stress-Response Enzy | 5e-06 | ||
| 1vp5_A | 298 | Crystal Structure Of 2,5-diketo-d-gluconic Acid Red | 1e-05 | ||
| 4f40_A | 288 | X-Ray Crystal Structure Of Apo Prostaglandin F Synt | 2e-05 | ||
| 1mzr_A | 296 | Structure Of Dkga From E.Coli At 2.13 A Resolution | 5e-05 | ||
| 2ipj_A | 321 | Crystal Structure Of H3alpha-Hydroxysteroid Dehydro | 8e-05 | ||
| 1ihi_A | 323 | Crystal Structure Of Human Type Iii 3-Alpha-Hydroxy | 9e-05 | ||
| 1xjb_A | 325 | Crystal Structure Of Human Type 3 3alpha-Hydroxyste | 1e-04 | ||
| 1j96_A | 323 | Human 3alpha-Hsd Type 3 In Ternary Complex With Nad | 1e-04 | ||
| 1zua_X | 317 | Crystal Structure Of Akr1b10 Complexed With Nadp+ A | 2e-04 | ||
| 1afs_A | 323 | Recombinant Rat Liver 3-Alpha-Hydroxysteroid Dehydr | 4e-04 | ||
| 1ral_A | 308 | Three-Dimensional Structure Of Rat Liver 3alpha- Hy | 4e-04 | ||
| 1lwi_A | 322 | 3-Alpha-HydroxysteroidDIHYDRODIOL DEHYDROGENASE FRO | 4e-04 | ||
| 3gug_A | 323 | Crystal Structure Of Akr1c1 L308v Mutant In Complex | 5e-04 | ||
| 3c3u_A | 323 | Crystal Structure Of Akr1c1 In Complex With Nadp An | 5e-04 | ||
| 1mrq_A | 323 | Crystal Structure Of Human 20alpha-hsd In Ternary C | 6e-04 | ||
| 4exa_A | 292 | Crystal Structure Of The Pa4992, The Putative Aldo- | 6e-04 |
| >pdb|3V0U|A Chain A, Crystal Structure Of Perakine Reductase, Founder Member Of A Novel Akr Subfamily With Unique Conformational Changes During Nadph Binding Length = 338 | Back alignment and structure |
|
| >pdb|3V0T|A Chain A, Crystal Structure Of Perakine Reductase, Founder Member Of A Novel Akr Subfamily With Unique Conformational Changes During Nadph Binding Length = 337 | Back alignment and structure |
|
| >pdb|3UYI|A Chain A, Crystal Structure Of Perakine Reductase, Founder Member Of A Novel Akr Subfamily With Unique Conformational Changes During Nadph Binding Length = 337 | Back alignment and structure |
|
| >pdb|3V0S|A Chain A, Crystal Structure Of Perakine Reductase, Founder Member Of A Novel Akr Subfamily With Unique Conformational Changes During Nadph Binding Length = 337 | Back alignment and structure |
|
| >pdb|1PYF|A Chain A, Structure Of Nadph-Dependent Family 11 Aldo-Keto Reductase Akr11a(Apo) Length = 312 | Back alignment and structure |
|
| >pdb|1YNP|A Chain A, Aldo-keto Reductase Akr11c1 From Bacillus Halodurans (apo Form) Length = 317 | Back alignment and structure |
|
| >pdb|1PZ1|A Chain A, Structure Of Nadph-Dependent Family 11 Aldo-Keto Reductase Akr11b(Holo) Length = 333 | Back alignment and structure |
|
| >pdb|3N2T|A Chain A, Structure Of The Glycerol Dehydrogenase Akr11b4 From Gluconobacter Oxydans Length = 348 | Back alignment and structure |
|
| >pdb|3EB3|A Chain A, Voltage-Dependent K+ Channel Beta Subunit (W121a) In Complex With Cortisone Length = 327 | Back alignment and structure |
|
| >pdb|1ZSX|A Chain A, Crystal Structure Of Human Potassium Channel Kv Beta-Subunit (Kcnab2) Length = 347 | Back alignment and structure |
|
| >pdb|1QRQ|A Chain A, Structure Of A Voltage-Dependent K+ Channel Beta Subunit Length = 325 | Back alignment and structure |
|
| >pdb|1EXB|A Chain A, Structure Of The Cytoplasmic Beta Subunit-T1 Assembly Of Voltage-Dependent K Channels Length = 332 | Back alignment and structure |
|
| >pdb|3EAU|A Chain A, Voltage-Dependent K+ Channel Beta Subunit In Complex With Cortisone Length = 327 | Back alignment and structure |
|
| >pdb|2A79|A Chain A, Mammalian Shaker Kv1.2 Potassium Channel- Beta Subunit Complex Length = 333 | Back alignment and structure |
|
| >pdb|3EB4|A Chain A, Voltage-Dependent K+ Channel Beta Subunit (I211r) In Complex With Cortisone Length = 327 | Back alignment and structure |
|
| >pdb|3LUT|A Chain A, A Structural Model For The Full-Length Shaker Potassium Channel Kv1.2 Length = 367 | Back alignment and structure |
|
| >pdb|3ERP|A Chain A, Structure Of Idp01002, A Putative Oxidoreductase From And Essential Gene Of Salmonella Typhimurium Length = 353 | Back alignment and structure |
|
| >pdb|4AUB|A Chain A, The Complex Structure Of The Bacterial Aldo-Keto Reductase Akr14a1 With Nadp And Citrate Length = 366 | Back alignment and structure |
|
| >pdb|3N6Q|A Chain A, Crystal Structure Of Yghz From E. Coli Length = 346 | Back alignment and structure |
|
| >pdb|2C91|A Chain A, Mouse Succinic Semialdehyde Reductase, Akr7a5 Length = 338 | Back alignment and structure |
|
| >pdb|1LQA|A Chain A, Tas Protein From Escherichia Coli In Complex With Nadph Length = 346 | Back alignment and structure |
|
| >pdb|2CLP|A Chain A, Crystal Structure Of Human Aflatoxin B1 Aldehyde Reductase Member 3 Length = 347 | Back alignment and structure |
|
| >pdb|1GVE|A Chain A, Aflatoxin Aldehyde Reductase (Akr7a1) From Rat Liver Length = 327 | Back alignment and structure |
|
| >pdb|3UP8|A Chain A, Crystal Structure Of A Putative 2,5-Diketo-D-Gluconic Acid Reductase B Length = 298 | Back alignment and structure |
|
| >pdb|1OG6|A Chain A, Ydhf, An Aldo-keto Reductase From E.coli Complexed With Nadph Length = 298 | Back alignment and structure |
|
| >pdb|3O0K|A Chain A, Crystal Structure Of AldoKETO REDUCTASE FROM BRUCELLA MELITENSIS Length = 283 | Back alignment and structure |
|
| >pdb|1UR3|M Chain M, Crystal Structure Of The Apo Form Of The E.Coli Ydhf Protein Length = 319 | Back alignment and structure |
|
| >pdb|4GAC|A Chain A, High Resolution Structure Of Mouse Aldehyde Reductase (akr1a4) In Its Apo-form Length = 324 | Back alignment and structure |
|
| >pdb|3KRB|A Chain A, Structure Of Aldose Reductase From Giardia Lamblia At 1.75a Resolution Length = 334 | Back alignment and structure |
|
| >pdb|1QWK|A Chain A, Structural Genomics Of Caenorhabditis Elegans: Hypothetical 35.2 Kda Protein (Aldose Reductase Family Member) Length = 317 | Back alignment and structure |
|
| >pdb|3CV7|A Chain A, Crystal Structure Of Porcine Aldehyde Reductase Ternary Complex Length = 325 | Back alignment and structure |
|
| >pdb|1CWN|A Chain A, Crystal Structure Of Porcine Aldehyde Reductase Holoenzyme Length = 324 | Back alignment and structure |
|
| >pdb|1AE4|A Chain A, Aldehyde Reductase Complexed With Cofactor And Inhibitor, Alpha Carbon Atoms Only Length = 325 | Back alignment and structure |
|
| >pdb|2ALR|A Chain A, Aldehyde Reductase Length = 324 | Back alignment and structure |
|
| >pdb|1HQT|A Chain A, The Crystal Structure Of An Aldehyde Reductase Y50f Mutant- Nadp Complex And Its Implications For Substrate Binding Length = 326 | Back alignment and structure |
|
| >pdb|1YE4|A Chain A, Crystal Structure Of The Lys-274 To Arg Mutant Of Candida Tenuis Xylose Reductase (Akr2b5) Bound To Nad+ Length = 322 | Back alignment and structure |
|
| >pdb|1JEZ|A Chain A, The Structure Of Xylose Reductase, A Dimeric Aldo-Keto Reductase From Candida Tenuis Length = 322 | Back alignment and structure |
|
| >pdb|1SM9|A Chain A, Crystal Structure Of An Engineered K274rn276d Double Mutant Of Xylose Reductase From Candida Tenuis Optimized To Utilize Nad Length = 322 | Back alignment and structure |
|
| >pdb|1Z9A|A Chain A, Crystal Structure Of The Asn-309 To Asp Mutant Of Candida Tenuis Xylose Reductase (Akr2b5) Bound To Nad+ Length = 321 | Back alignment and structure |
|
| >pdb|2BGQ|A Chain A, Apo Aldose Reductase From Barley Length = 344 | Back alignment and structure |
|
| >pdb|1R38|A Chain A, Crystal Structure Of H114a Mutant Of Candida Tenuis Xylose Reductase Length = 322 | Back alignment and structure |
|
| >pdb|4FZI|A Chain A, Crystal Structure Of Prostaglandin F Synthase From Trypanosoma Cruzi Length = 290 | Back alignment and structure |
|
| >pdb|2WZM|A Chain A, Crystal Structure Of A Mycobacterium Aldo-Keto Reductase In Its Apo And Liganded Form Length = 283 | Back alignment and structure |
|
| >pdb|1VBJ|A Chain A, The Crystal Structure Of Prostaglandin F Synthase From Trypanosoma Brucei Length = 281 | Back alignment and structure |
|
| >pdb|3H7R|A Chain A, Crystal Structure Of The Plant Stress-Response Enzyme Akr4c8 Length = 331 | Back alignment and structure |
|
| >pdb|1VP5|A Chain A, Crystal Structure Of 2,5-diketo-d-gluconic Acid Reductase (tm1009) From Thermotoga Maritima At 2.40 A Resolution Length = 298 | Back alignment and structure |
|
| >pdb|4F40|A Chain A, X-Ray Crystal Structure Of Apo Prostaglandin F Synthase From Leishmania Major Friedlin Length = 288 | Back alignment and structure |
|
| >pdb|1MZR|A Chain A, Structure Of Dkga From E.Coli At 2.13 A Resolution Solved By Molecular Replacement Length = 296 | Back alignment and structure |
|
| >pdb|2IPJ|A Chain A, Crystal Structure Of H3alpha-Hydroxysteroid Dehydrogenase Type 3 Mutant Y24a In Complex With Nadp+ And Epi-Testosterone Length = 321 | Back alignment and structure |
|
| >pdb|1IHI|A Chain A, Crystal Structure Of Human Type Iii 3-Alpha-Hydroxysteroid DehydrogenaseBILE ACID BINDING PROTEIN (AKR1C2) COMPLEXED With Nadp+ And Ursodeoxycholate Length = 323 | Back alignment and structure |
|
| >pdb|1XJB|A Chain A, Crystal Structure Of Human Type 3 3alpha-Hydroxysteroid Dehydrogenase In Complex With Nadp(H), Citrate And Acetate Molecules Length = 325 | Back alignment and structure |
|
| >pdb|1J96|A Chain A, Human 3alpha-Hsd Type 3 In Ternary Complex With Nadp And Testosterone Length = 323 | Back alignment and structure |
|
| >pdb|1ZUA|X Chain X, Crystal Structure Of Akr1b10 Complexed With Nadp+ And Tolrestat Length = 317 | Back alignment and structure |
|
| >pdb|1AFS|A Chain A, Recombinant Rat Liver 3-Alpha-Hydroxysteroid Dehydrogenase (3-Alpha-Hsd) Complexed With Nadp And Testosterone Length = 323 | Back alignment and structure |
|
| >pdb|1RAL|A Chain A, Three-Dimensional Structure Of Rat Liver 3alpha- Hydroxysteroid(Slash)dihydrodiol Dehydrogenase: A Member Of The Aldo-Keto Reductase Superfamily Length = 308 | Back alignment and structure |
|
| >pdb|1LWI|A Chain A, 3-Alpha-HydroxysteroidDIHYDRODIOL DEHYDROGENASE FROM Rattus Norvegicus Length = 322 | Back alignment and structure |
|
| >pdb|3GUG|A Chain A, Crystal Structure Of Akr1c1 L308v Mutant In Complex With Nadp And 3,5-Dichlorosalicylic Acid Length = 323 | Back alignment and structure |
|
| >pdb|3C3U|A Chain A, Crystal Structure Of Akr1c1 In Complex With Nadp And 3,5- Dichlorosalicylic Acid Length = 323 | Back alignment and structure |
|
| >pdb|1MRQ|A Chain A, Crystal Structure Of Human 20alpha-hsd In Ternary Complex With Nadp And 20alpha-hydroxy-progesterone Length = 323 | Back alignment and structure |
|
| >pdb|4EXA|A Chain A, Crystal Structure Of The Pa4992, The Putative Aldo-keto Reductase From Pseudomona Aeruginosa Length = 292 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 252 | |||
| 1pyf_A | 312 | IOLS protein; beta-alpha barrel, aldo-keto reducta | 1e-136 | |
| 3n2t_A | 348 | Putative oxidoreductase; aldo/keto reductase super | 1e-135 | |
| 1pz1_A | 333 | GSP69, general stress protein 69; beta-alpha barre | 1e-120 | |
| 3v0s_A | 337 | Perakine reductase; AKR superfamily, oxidoreductas | 1e-112 | |
| 1ynp_A | 317 | Oxidoreductase, AKR11C1; aldo-keto reductase, NADP | 1e-108 | |
| 1ur3_M | 319 | Hypothetical oxidoreductase YDHF; NADP binding, al | 1e-102 | |
| 2bp1_A | 360 | Aflatoxin B1 aldehyde reductase member 2; oxidored | 9e-72 | |
| 1gve_A | 327 | Aflatoxin B1 aldehyde reductase member 3; oxidored | 3e-69 | |
| 3eau_A | 327 | Voltage-gated potassium channel subunit beta-2; kv | 5e-65 | |
| 3erp_A | 353 | Putative oxidoreductase; funded by the national in | 6e-65 | |
| 3lut_A | 367 | Voltage-gated potassium channel subunit beta-2; vo | 3e-63 | |
| 3n6q_A | 346 | YGHZ aldo-keto reductase; TIM barrel, oxidoreducta | 1e-62 | |
| 1lqa_A | 346 | TAS protein; TIM barrel, structure 2 function proj | 5e-57 | |
| 1qwk_A | 317 | Aldose reductase, aldo-keto reductase family 1 mem | 1e-25 | |
| 3up8_A | 298 | Putative 2,5-diketo-D-gluconic acid reductase B; n | 4e-25 | |
| 1zgd_A | 312 | Chalcone reductase; polyketide, deoxychalcone, iso | 3e-24 | |
| 2bgs_A | 344 | Aldose reductase; holoenzyme, aldo/keto reductase, | 3e-24 | |
| 3buv_A | 326 | 3-OXO-5-beta-steroid 4-dehydrogenase; 5-beta-reduc | 4e-24 | |
| 1s1p_A | 331 | Aldo-keto reductase family 1 member C3; TIM-barrel | 2e-23 | |
| 1mi3_A | 322 | Xylose reductase, XR; aldo-keto reductase, beta-al | 2e-22 | |
| 1afs_A | 323 | 3-alpha-HSD, 3-alpha-hydroxysteroid dehydrogenase; | 2e-22 | |
| 3h7u_A | 335 | Aldo-keto reductase; stress response, NADP, drough | 2e-22 | |
| 1us0_A | 316 | Aldose reductase; oxidoreductase, NADP, IDD594; HE | 3e-22 | |
| 2wzm_A | 283 | Aldo-keto reductase; oxidoreductase; HET: NA7; 1.6 | 3e-22 | |
| 1vp5_A | 298 | 2,5-diketo-D-gluconic acid reductase; TM1009, stru | 3e-22 | |
| 3o3r_A | 316 | Aldo-keto reductase family 1, member B7; aldose re | 6e-22 | |
| 3krb_A | 334 | Aldose reductase; ssgcid, SBRI, emerald biostructu | 7e-22 | |
| 2ao0_A | 324 | Aldehyde dehydrogenase; TIM barrel, aldo-keto redu | 8e-22 | |
| 3o0k_A | 283 | Aldo/keto reductase; ssgcid, ALS collaborative cry | 9e-22 | |
| 4f40_A | 288 | Prostaglandin F2-alpha synthase/D-arabinose dehyd; | 1e-21 | |
| 3h7r_A | 331 | Aldo-keto reductase; stress response, NADP, drough | 1e-21 | |
| 1hw6_A | 278 | 2,5-diketo-D-gluconic acid reductase; aldo-keto re | 1e-21 | |
| 1vbj_A | 281 | Prostaglandin F synthase; TIM barrel, oxidoreducta | 4e-21 | |
| 1mzr_A | 296 | 2,5-diketo-D-gluconate reductase A; alpha/beta-bar | 6e-21 | |
| 4gie_A | 290 | Prostaglandin F synthase; structural genomics, nia | 8e-21 | |
| 3b3e_A | 310 | YVGN protein; aldo-keto reductase, oxidoreductase; | 2e-20 | |
| 3f7j_A | 276 | YVGN protein; aldo-keto reductase, oxidoreductase; | 2e-20 | |
| 3ln3_A | 324 | Dihydrodiol dehydrogenase; putative reductase, str | 3e-15 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 2e-04 |
| >1pyf_A IOLS protein; beta-alpha barrel, aldo-keto reductase, TIM barrel, oxidoreductase; 1.80A {Bacillus subtilis} SCOP: c.1.7.1 PDB: 1pz0_A* Length = 312 | Back alignment and structure |
|---|
Score = 384 bits (989), Expect = e-136
Identities = 69/225 (30%), Positives = 114/225 (50%), Gaps = 3/225 (1%)
Query: 10 RVKLGTQGLEVSKLGYGCMNLSG-GYSSPVSEEDGISMIKHAFSKGITFFDTADVYGQNA 68
+ KLG L+V +G G + G ++EE G +++ A G+T DTA +YG
Sbjct: 3 KAKLGKSDLQVFPIGLGTNAVGGHNLYPNLNEETGKELVREAIRNGVTMLDTAYIYGIGR 62
Query: 69 NEVLLGKALKQLPREKIQVATKFGIAGIGVAGVIVKGAPDYVRSCCEASLKRLDVDYIDL 128
+E L+G+ L++ RE + +ATK + +PD+++ + SLKRL+ DYIDL
Sbjct: 63 SEELIGEVLREFNREDVVIATKAAHR-KQGNDFVFDNSPDFLKKSVDESLKRLNTDYIDL 121
Query: 129 YYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPGTIRRAHAVHPITAVQMEWSLW 188
+Y H D P +E + + ++ + GKI+ IG+S S ++ A+ + +Q E++L
Sbjct: 122 FYIHFPDEHTPKDEAVNALNEMKKAGKIRSIGVSNFSLEQLKEANKDGLVDVLQGEYNLL 181
Query: 189 TRDIEEEIIPLCRELGIGIVPYSPLGRGFFGGK-AVVENVPADSF 232
R+ E+ P +E I +PY PL G GK P
Sbjct: 182 NREAEKTFFPYTKEHNISFIPYFPLVSGLLAGKYTEDTTFPEGDL 226
|
| >3n2t_A Putative oxidoreductase; aldo/keto reductase superfamily, AKR, AKR11B4, TIM barrel; 2.00A {Gluconobacter oxydans} Length = 348 | Back alignment and structure |
|---|
Score = 383 bits (985), Expect = e-135
Identities = 68/231 (29%), Positives = 109/231 (47%), Gaps = 6/231 (2%)
Query: 7 QVPRVKLGTQGLEVSKLGYGCMNLSGGYSSPVSEEDGISMIKHAFSKGITFFDTADVYGQ 66
+++ +S++ G + G +++G+ I A +GI DTA VYG
Sbjct: 18 ASDTIRIPGIDTPLSRVALGTWAIGGWMWGGPDDDNGVRTIHAALDEGINLIDTAPVYGF 77
Query: 67 NANEVLLGKALKQLPREKIQVATKFGI----AGIGVAGVIVKGAPDYVRSCCEASLKRLD 122
+E ++G+AL + K VATK G+ V P +R E SL+RL
Sbjct: 78 GHSEEIVGRALAEK-PNKAHVATKLGLHWVGEDEKNMKVFRDSRPARIRKEVEDSLRRLR 136
Query: 123 VDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPGTIRRAHAVHPITAVQ 182
V+ IDL H D PI+E+ E++KL ++GKI+ +G+S SP + V P+ +Q
Sbjct: 137 VETIDLEQIHWPDDKTPIDESARELQKLHQDGKIRALGVSNFSPEQMDIFREVAPLATIQ 196
Query: 183 MEWSLWTRDIEEEIIPLCRELGIGIVPYSPLGRGFFGGK-AVVENVPADSF 232
+L+ R IE++I+P + ++ Y L RG GK P D
Sbjct: 197 PPLNLFERTIEKDILPYAEKHNAVVLAYGALCRGLLTGKMNRDTTFPKDDL 247
|
| >1pz1_A GSP69, general stress protein 69; beta-alpha barrel, aldo-keto reductase, TIM barrel, oxidoreductase; HET: NAP; 2.20A {Bacillus subtilis} SCOP: c.1.7.1 Length = 333 | Back alignment and structure |
|---|
Score = 345 bits (888), Expect = e-120
Identities = 73/212 (34%), Positives = 110/212 (51%), Gaps = 2/212 (0%)
Query: 11 VKLGTQGLEVSKLGYGCMNLSGGYSSPVSEEDGISMIKHAFSKGITFFDTADVYGQNANE 70
+ G+E S++G G + G E+ I I+ A +GIT DTA YG +E
Sbjct: 4 TSIADTGIEASRIGLGTWAIGGTMWGGTDEKTSIETIRAALDQGITLIDTAPAYGFGQSE 63
Query: 71 VLLGKALKQL-PREKIQVATKFGIAGIGVAGVIVKGAPDYVRSCCEASLKRLDVDYIDLY 129
++GKA+K+ R+++ +ATK + + + E SLKRL DYIDLY
Sbjct: 64 EIVGKAIKEYMKRDQVILATKTALD-WKNNQLFRHANRARIVEEVENSLKRLQTDYIDLY 122
Query: 130 YQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPGTIRRAHAVHPITAVQMEWSLWT 189
H D VPIEET MK+L + GKI+ IG+S S + AV P+ +Q ++L+
Sbjct: 123 QVHWPDPLVPIEETAEVMKELYDAGKIRAIGVSNFSIEQMDTFRAVAPLHTIQPPYNLFE 182
Query: 190 RDIEEEIIPLCRELGIGIVPYSPLGRGFFGGK 221
R++EE ++P ++ I + Y L RG GK
Sbjct: 183 REMEESVLPYAKDNKITTLLYGSLCRGLLTGK 214
|
| >3v0s_A Perakine reductase; AKR superfamily, oxidoreductase; HET: MLZ M3L MLY ATR; 1.77A {Rauvolfia serpentina} PDB: 3v0u_A 3v0t_A* 3uyi_A* Length = 337 | Back alignment and structure |
|---|
Score = 324 bits (833), Expect = e-112
Identities = 166/226 (73%), Positives = 196/226 (86%), Gaps = 1/226 (0%)
Query: 8 VPRVKLGTQGLEVSKLGYGCMNLSGGYSSPVSEEDGISMIKHAFSKGITFFDTADVYGQN 67
+PRVKLGTQGLEVSKLG+GCM LSG Y+ + EE GI++IK AF+ GITFFDT+D+YG+N
Sbjct: 1 MPRVKLGTQGLEVSKLGFGCMGLSGDYNDALPEEQGIAVIKEAFNCGITFFDTSDIYGEN 60
Query: 68 -ANEVLLGKALKQLPREKIQVATKFGIAGIGVAGVIVKGAPDYVRSCCEASLKRLDVDYI 126
+NE LLGKALKQLPRE IQV TKFGI IG +GV G PDYVRSCCEASLKRLDVDYI
Sbjct: 61 GSNEELLGKALKQLPREXIQVGTKFGIHEIGFSGVKAXGTPDYVRSCCEASLKRLDVDYI 120
Query: 127 DLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPGTIRRAHAVHPITAVQMEWS 186
DL+Y HR+DT+VPIE T+GE+ LVEEGKI Y+GLSEASP TIRRAHAVHP+TA+Q+E+S
Sbjct: 121 DLFYIHRIDTTVPIEITMGELXXLVEEGKIXYVGLSEASPDTIRRAHAVHPVTALQIEYS 180
Query: 187 LWTRDIEEEIIPLCRELGIGIVPYSPLGRGFFGGKAVVENVPADSF 232
LWTRDIE+EI+PLCR+LGIGIVPYSP+GRG F GKA+ E++P +S
Sbjct: 181 LWTRDIEDEIVPLCRQLGIGIVPYSPIGRGLFWGKAIKESLPENSV 226
|
| >1ynp_A Oxidoreductase, AKR11C1; aldo-keto reductase, NADPH; HET: SUC; 1.25A {Bacillus halodurans} PDB: 1ynq_A* Length = 317 | Back alignment and structure |
|---|
Score = 313 bits (804), Expect = e-108
Identities = 76/212 (35%), Positives = 109/212 (51%), Gaps = 9/212 (4%)
Query: 11 VKLGTQGLEVSKLGYGCMNLSGGYSSPVSEEDGISMIKHAFSKGITFFDTADVYGQNANE 70
+LGT L VS+LG+GCM+L E ++ GI + DTAD+Y Q NE
Sbjct: 24 RQLGTSDLHVSELGFGCMSLGT------DETKARRIMDEVLELGINYLDTADLYNQGLNE 77
Query: 71 VLLGKALKQLPREKIQVATKFGIA-GIGVAGVIVKGAPDYVRSCCEASLKRLDVDYIDLY 129
+GKALK R+ I +ATK G G G + Y++ + SL+RL DYIDLY
Sbjct: 78 QFVGKALKG-RRQDIILATKVGNRFEQGKEGWWWDPSKAYIKEAVKDSLRRLQTDYIDLY 136
Query: 130 YQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPGTIRRAHAVHPITAVQMEWSLWT 189
H PI+ETI ++L +EG I+Y G+S P I+ I ++ M++S+
Sbjct: 137 QLHGGTIDDPIDETIEAFEELKQEGVIRYYGISSIRPNVIKEYLKRSNIVSIMMQYSILD 196
Query: 190 RDIEEEIIPLCRELGIGIVPYSPLGRGFFGGK 221
R EE PL +E G+ +V P+ RG +
Sbjct: 197 RRP-EEWFPLIQEHGVSVVVRGPVARGLLSRR 227
|
| >1ur3_M Hypothetical oxidoreductase YDHF; NADP binding, aldo-keto reductase; 2.57A {Escherichia coli} SCOP: c.1.7.1 PDB: 1og6_A* Length = 319 | Back alignment and structure |
|---|
Score = 298 bits (765), Expect = e-102
Identities = 57/228 (25%), Positives = 100/228 (43%), Gaps = 11/228 (4%)
Query: 1 MAEEKHQVPRVKLGTQGLEVSKLGYGCMNLSGGYSSPVSEEDGISMIKHAFSKGITFFDT 60
+ ++ V R+ + QG E S+ G L +S +S I+ G+T D
Sbjct: 16 LYKKAGLVQRITIAPQGPEFSRFVMGYWRLMD---WNMSARQLVSFIEEHLDLGVTTVDH 72
Query: 61 ADVYGQNANEVLLGKALKQLP--REKIQVATKFGIAGIGVAGVIVKGA---PDYVRSCCE 115
AD+YG E G+ALK P RE++++ +K GIA ++ D++ E
Sbjct: 73 ADIYGGYQCEAAFGEALKLAPHLRERMEIVSKCGIATTAREENVIGHYITDRDHIIKSAE 132
Query: 116 ASLKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPGTIRRAHAV 175
SL L D++DL HR D + +E K L + GK+++ G+S +P +
Sbjct: 133 QSLINLATDHLDLLLIHRPDPLMDADEVADAFKHLHQSGKVRHFGVSNFTPAQFALLQSR 192
Query: 176 --HPITAVQMEWSLWTRD-IEEEIIPLCRELGIGIVPYSPLGRGFFGG 220
+ Q+E S + + + + ++L + + +S LG G
Sbjct: 193 LPFTLATNQVEISPVHQPLLLDGTLDQLQQLRVRPMAWSCLGGGRLFN 240
|
| >1gve_A Aflatoxin B1 aldehyde reductase member 3; oxidoreductase, aldo-keto reductase, succinic semialdehyde oxidoreductase, AKR7 family; HET: NAP CIT; 1.38A {Rattus norvegicus} SCOP: c.1.7.1 PDB: 2clp_A* 2c91_A* Length = 327 | Back alignment and structure |
|---|
Score = 215 bits (549), Expect = 3e-69
Identities = 59/211 (27%), Positives = 87/211 (41%), Gaps = 20/211 (9%)
Query: 20 VSKLGYGCMNLSGGYSSPVSEEDGISMIKHAFSKGITFFDTADVYGQNANEVLLGKALKQ 79
G M + G + + ++ +G T DTA VY +E +LG
Sbjct: 5 RPATVLGAMEM-GR---RMDVTSSSASVRAFLQRGHTEIDTAFVYANGQSETILGDLGLG 60
Query: 80 LP--REKIQVATKFGIAGIGVAGVIVKGA-PDYVRSCCEASLKRLDVDYIDLYYQHRVDT 136
L K+++ATK + G K P VR E SLKRL +DL+Y H D
Sbjct: 61 LGRSGCKVKIATKAA----PMFG---KTLKPADVRFQLETSLKRLQCPRVDLFYLHFPDH 113
Query: 137 SVPIEETIGEMKKLVEEGKIKYIGLSEASPGTIRRAHAV------HPITAVQMEWSLWTR 190
PIEET+ +L +EGK +GLS + + T Q ++ TR
Sbjct: 114 GTPIEETLQACHQLHQEGKFVELGLSNYVSWEVAEICTLCKKNGWIMPTVYQGMYNAITR 173
Query: 191 DIEEEIIPLCRELGIGIVPYSPLGRGFFGGK 221
+E E+ P R G+ ++PL G G+
Sbjct: 174 QVETELFPCLRHFGLRFYAFNPLAGGLLTGR 204
|
| >3eau_A Voltage-gated potassium channel subunit beta-2; kvbeta, cortisone, NADPH, cytoplasm, ION transport, ionic channel, NADP, phosphoprotein; HET: NDP PDN; 1.82A {Rattus norvegicus} SCOP: c.1.7.1 PDB: 2r9r_A* 2a79_A* 3lnm_A* 1exb_A* 3eb4_A* 3eb3_A* 1qrq_A* 1zsx_A* Length = 327 | Back alignment and structure |
|---|
Score = 204 bits (521), Expect = 5e-65
Identities = 68/232 (29%), Positives = 115/232 (49%), Gaps = 21/232 (9%)
Query: 12 KLGTQGLEVSKLGYGC-MNLSGGYSSPVSEEDGISMIKHAFSKGITFFDTADVYGQNANE 70
LG GL VS LG G + + +++E ++ A+ GI FDTA+VY E
Sbjct: 7 NLGKSGLRVSCLGLGTWVT----FGGQITDEMAEHLMTLAYDNGINLFDTAEVYAAGKAE 62
Query: 71 VLLGKALKQL--PREKIQVATK--FGIAGIGVAGVIVKGAPDYVRSCCEASLKRLDVDYI 126
V+LG +K+ R + + TK +G G+ K ++ +ASL+RL ++Y+
Sbjct: 63 VVLGNIIKKKGWRRSSLVITTKIFWGGKAETERGLSRK----HIIEGLKASLERLQLEYV 118
Query: 127 DLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPGTIRRAHAV------HPITA 180
D+ + +R D + P+EET+ M ++ +G Y G S S I A++V P
Sbjct: 119 DVVFANRPDPNTPMEETVRAMTHVINQGMAMYWGTSRWSSMEIMEAYSVARQFNLIPPIC 178
Query: 181 VQMEWSLWTRD-IEEEIIPLCRELGIGIVPYSPLGRGFFGGKAVVENVPADS 231
Q E+ ++ R+ +E ++ L ++G+G + +SPL G GK +P S
Sbjct: 179 EQAEYHMFQREKVEVQLPELFHKIGVGAMTWSPLACGIVSGK-YDSGIPPYS 229
|
| >3erp_A Putative oxidoreductase; funded by the national institute of allergy and infectious D of NIH contract number HHSN272200700058C; 1.55A {Salmonella enterica subsp} Length = 353 | Back alignment and structure |
|---|
Score = 204 bits (522), Expect = 6e-65
Identities = 63/232 (27%), Positives = 117/232 (50%), Gaps = 17/232 (7%)
Query: 11 VKLGTQGLEVSKLGYGCMNLSGGYSSPVSEEDGISMIKHAFSKGITFFDTADVYGQN--A 68
+ G G+++ + G + + E+ ++++ AF GIT FD A+ YG +
Sbjct: 37 RRCGRSGVKLPAISLGLWH---NFGDTTRVENSRALLQRAFDLGITHFDLANNYGPPPGS 93
Query: 69 NEVLLGKALKQLP---REKIQVATK-FGIAGIGVAGVIVKGAPDYVRSCCEASLKRLDVD 124
E G+ L++ R+++ ++TK G G G+ Y+ + + SLKR+ ++
Sbjct: 94 AECNFGRILQEDFLPWRDELIISTKAGYTMWDGPYGD--WGSRKYLIASLDQSLKRMGLE 151
Query: 125 YIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPGTIRRAHAV-----HPIT 179
Y+D++Y HR D P++ET+ + LV GK Y+G+S R+A + P
Sbjct: 152 YVDIFYHHRPDPETPLKETMKALDHLVRHGKALYVGISNYPADLARQAIDILEDLGTPCL 211
Query: 180 AVQMEWSLWTRDIEEEIIPLCRELGIGIVPYSPLGRGFFGGKAVVENVPADS 231
Q ++SL+ R +E+ ++ L +E G+G + +SPL G + + +P DS
Sbjct: 212 IHQPKYSLFERWVEDGLLALLQEKGVGSIAFSPLAGGQLTDR-YLNGIPEDS 262
|
| >3lut_A Voltage-gated potassium channel subunit beta-2; voltage gating, potassium channel, KV1.2, gating charges, no analysis, ION transport; HET: NAP; 2.90A {Rattus norvegicus} Length = 367 | Back alignment and structure |
|---|
Score = 200 bits (512), Expect = 3e-63
Identities = 68/232 (29%), Positives = 115/232 (49%), Gaps = 21/232 (9%)
Query: 12 KLGTQGLEVSKLGYGC-MNLSGGYSSPVSEEDGISMIKHAFSKGITFFDTADVYGQNANE 70
LG GL VS LG G + + +++E ++ A+ GI FDTA+VY E
Sbjct: 41 NLGKSGLRVSCLGLGTWVT----FGGQITDEMAEHLMTLAYDNGINLFDTAEVYAAGKAE 96
Query: 71 VLLGKALKQL--PREKIQVATK--FGIAGIGVAGVIVKGAPDYVRSCCEASLKRLDVDYI 126
V+LG +K+ R + + TK +G G+ K ++ +ASL+RL ++Y+
Sbjct: 97 VVLGNIIKKKGWRRSSLVITTKIFWGGKAETERGLSRK----HIIEGLKASLERLQLEYV 152
Query: 127 DLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPGTIRRAHAV------HPITA 180
D+ + +R D + P+EET+ M ++ +G Y G S S I A++V P
Sbjct: 153 DVVFANRPDPNTPMEETVRAMTHVINQGMAMYWGTSRWSSMEIMEAYSVARQFNLIPPIC 212
Query: 181 VQMEWSLWTRD-IEEEIIPLCRELGIGIVPYSPLGRGFFGGKAVVENVPADS 231
Q E+ ++ R+ +E ++ L ++G+G + +SPL G GK +P S
Sbjct: 213 EQAEYHMFQREKVEVQLPELFHKIGVGAMTWSPLACGIVSGK-YDSGIPPYS 263
|
| >3n6q_A YGHZ aldo-keto reductase; TIM barrel, oxidoreductase; 1.80A {Escherichia coli} Length = 346 | Back alignment and structure |
|---|
Score = 198 bits (507), Expect = 1e-62
Identities = 64/232 (27%), Positives = 116/232 (50%), Gaps = 18/232 (7%)
Query: 12 KLGTQGLEVSKLGYGCMNLSGGYSSPVSEEDGISMIKHAFSKGITFFDTADVYGQN--AN 69
G GL + L G + G + E ++++ AF GIT FD A+ YG +
Sbjct: 17 YCGKSGLRLPALSLGLWHNFGHV---NALESQRAILRKAFDLGITHFDLANNYGPPPGSA 73
Query: 70 EVLLGKALKQ---LPREKIQVATK-FGIAGIGVAGVIVKGAPDYVRSCCEASLKRLDVDY 125
E G+ L++ R+++ ++TK G G G+ Y+ + + SLKR+ ++Y
Sbjct: 74 EENFGRLLREDFAAYRDELIISTKAGYDMWPGPYGS--GGSRKYLLASLDQSLKRMGLEY 131
Query: 126 IDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPGTIRRAHAV-----HPITA 180
+D++Y HRVD + P+EET + V+ GK Y+G+S SP ++ + P+
Sbjct: 132 VDIFYSHRVDENTPMEETASALAHAVQSGKALYVGISSYSPERTQKMVELLREWKIPLLI 191
Query: 181 VQMEWSLWTRDIEE-EIIPLCRELGIGIVPYSPLGRGFFGGKAVVENVPADS 231
Q ++L R +++ ++ + G+G + ++PL +G GK + +P DS
Sbjct: 192 HQPSYNLLNRWVDKSGLLDTLQNNGVGCIAFTPLAQGLLTGK-YLNGIPQDS 242
|
| >1lqa_A TAS protein; TIM barrel, structure 2 function project, S2F, structural GE oxidoreductase; HET: NDP; 1.60A {Escherichia coli} SCOP: c.1.7.1 Length = 346 | Back alignment and structure |
|---|
Score = 184 bits (469), Expect = 5e-57
Identities = 70/262 (26%), Positives = 112/262 (42%), Gaps = 42/262 (16%)
Query: 12 KLGTQGLEVSKLGYGCMNLSGGYSSPVSEEDGISMIKHAFSKGITFFDTADVYGQNAN-- 69
++ LEVS LG G M + SE D + + +A ++GI D A++Y
Sbjct: 5 RIPHSSLEVSTLGLGTMT----FGEQNSEADAHAQLDYAVAQGINLIDVAEMYPVPPRPE 60
Query: 70 -----EVLLGKALKQL-PREKIQVATKFGIAGIGVAGV-IVKGAPDY----VRSCCEASL 118
E +G L + REK+ +A+K ++G ++ +R SL
Sbjct: 61 TQGLTETYVGNWLAKHGSREKLIIASK--VSGPSRNNDKGIRPDQALDRKNIREALHDSL 118
Query: 119 KRLDVDYIDLYYQHRVD-----------------TSVPIEETIGEMKKLVEEGKIKYIGL 161
KRL DY+DLY H +V + +T+ + + GKI+YIG+
Sbjct: 119 KRLQTDYLDLYQVHWPQRPTNCFGKLGYSWTDSAPAVSLLDTLDALAEYQRAGKIRYIGV 178
Query: 162 S-EASPGTIR-----RAHAVHPITAVQMEWSLWTRDIEEEIIPLCRELGIGIVPYSPLGR 215
S E + G +R H + I +Q +SL R E + + + G+ ++ YS LG
Sbjct: 179 SNETAFGVMRYLHLADKHDLPRIVTIQNPYSLLNRSFEVGLAEVSQYEGVELLAYSCLGF 238
Query: 216 GFFGGKAVVENVPADSFLVLFS 237
G GK + PA + LFS
Sbjct: 239 GTLTGKYLNGAKPAGARNTLFS 260
|
| >1qwk_A Aldose reductase, aldo-keto reductase family 1 member C1, XH961; structural genomics, PSI, protein structure initiative; 1.60A {Caenorhabditis elegans} SCOP: c.1.7.1 Length = 317 | Back alignment and structure |
|---|
Score = 101 bits (253), Expect = 1e-25
Identities = 52/228 (22%), Positives = 93/228 (40%), Gaps = 42/228 (18%)
Query: 7 QVPRVKLGTQGLEVSKLGYGCMNLSGGYSSPVSEEDGISMIKHAFSKGITFFDTADVYGQ 66
+KL G+E+ +G G + S + I+ +K A G DTA VY
Sbjct: 4 ATASIKLSN-GVEMPVIGLGT------WQSS--PAEVITAVKTAVKAGYRLIDTASVYQ- 53
Query: 67 NANEVLLGKALKQ------LPREKIQVATKFGIAGIGVAGVIVKGAPDYVRSCCEASLKR 120
NE +G A+K+ + RE++ + TK + P + SLK+
Sbjct: 54 --NEEAIGTAIKELLEEGVVKREELFITTKAWTHELA---------PGKLEGGLRESLKK 102
Query: 121 LDVDYIDLYYQH---------RVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPGTIRR 171
L ++Y+DLY H + P+E+ + + + G K +G+S + I R
Sbjct: 103 LQLEYVDLYLAHMPAAFNDDMSEHIASPVEDVWRQFDAVYKAGLAKAVGVSNWNNDQISR 162
Query: 172 --AHAVHPITAVQME-WSLWTRDIEEEIIPLCRELGIGIVPYSPLGRG 216
A + P+ Q+E + + + + C++ I + Y+ LG
Sbjct: 163 ALALGLTPVHNSQVELHLYFPQ---HDHVDFCKKHNISVTSYATLGSP 207
|
| >3up8_A Putative 2,5-diketo-D-gluconic acid reductase B; nysgrc, PSI-biology, structural genomics; 1.96A {Sinorhizobium meliloti} Length = 298 | Back alignment and structure |
|---|
Score = 99.6 bits (249), Expect = 4e-25
Identities = 48/218 (22%), Positives = 94/218 (43%), Gaps = 29/218 (13%)
Query: 4 EKHQVPRVKLGTQGLEVSKLGYGCMNLSGGYSSPVSEEDGISMIKHAFSKGITFFDTADV 63
+ + G + LG+G +SG + + ++ A G DTA +
Sbjct: 19 YFQSMMHAVS-SNGANIPALGFGTFRMSG--------AEVLRILPQALKLGFRHVDTAQI 69
Query: 64 YGQNANEVLLGKALKQ--LPREKIQVATKFGIAGIGVAGVIVKGAPDYVRSCCEASLKRL 121
YG NE +G+A+++ +PR + + TK + D + + SL++L
Sbjct: 70 YG---NEAEVGEAIQKSGIPRADVFLTTKVWVDNYR---------HDAFIASVDESLRKL 117
Query: 122 DVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPGTIRRAHAVHPIT-A 180
D++DL H + VP+ E IG + ++ GK+++IG+S + + A + A
Sbjct: 118 RTDHVDLLLLHWPGSDVPMAERIGALNEVRNAGKVRHIGISNFNTTQMEEAARLSDAPIA 177
Query: 181 V-QMEWS-LWTRDIEEEIIPLCRELGIGIVPYSPLGRG 216
Q+E+ + +++ R LG+ + Y + G
Sbjct: 178 TNQVEYHPYLDQ---TKVLQTARRLGMSLTSYYAMANG 212
|
| >1zgd_A Chalcone reductase; polyketide, deoxychalcone, isoflavonoid, biosynthesis, plant protein; HET: NAP; 1.70A {Medicago sativa} Length = 312 | Back alignment and structure |
|---|
Score = 97.6 bits (244), Expect = 3e-24
Identities = 59/247 (23%), Positives = 98/247 (39%), Gaps = 52/247 (21%)
Query: 7 QVPRVKL--GTQGLEVSKLGYGCMNLSGGYSSPVSEEDGISMIKHAFSKGITFFDTADVY 64
++P L + L++ +G G ++D I A +G FDTA Y
Sbjct: 5 EIPTKVLTNTSSQLKMPVVGMGS------APDFTCKKDTKDAIIEAIKQGYRHFDTAAAY 58
Query: 65 GQNANEVLLGKALKQ------LPREKIQVATKFGIAGIGVAGVIVKGAPDYVRSCCEASL 118
G +E LG+ALK+ + R+ + V +K + P V + SL
Sbjct: 59 G---SEQALGEALKEAIELGLVTRDDLFVTSKLWVTENH---------PHLVIPALQKSL 106
Query: 119 KRLDVDYIDLYYQH----------------RVDTSVPIEETIGEMKKLVEEGKIKYIGLS 162
K L +DY+DLY H ++ M++ ++ G K IG+S
Sbjct: 107 KTLQLDYLDLYLIHWPLSSQPGKFSFPIDVADLLPFDVKGVWESMEESLKLGLTKAIGVS 166
Query: 163 EASPGTIRR--AHA-VHPITAV-QMEWS-LWTRDIEEEIIPLCRELGIGIVPYSPLGRGF 217
S + + A V P AV Q+E + W + +++ C GI + +SP+ +G
Sbjct: 167 NFSVKKLENLLSVATVLP--AVNQVEMNLAWQQ---KKLREFCNAHGIVLTAFSPVRKGA 221
Query: 218 FGGKAVV 224
G V
Sbjct: 222 SRGPNEV 228
|
| >2bgs_A Aldose reductase; holoenzyme, aldo/keto reductase, oxidoreductase; HET: NDP; 1.64A {Hordeum vulgare} PDB: 2bgq_A* 2vdg_A* Length = 344 | Back alignment and structure |
|---|
Score = 98.1 bits (245), Expect = 3e-24
Identities = 61/249 (24%), Positives = 93/249 (37%), Gaps = 50/249 (20%)
Query: 1 MAEEKHQVPRVKLGTQGLEVSKLGYGCMNLSGGYSSPVSEEDGISMIKHAFSKGITFFDT 60
+ + L + G + +G G + + + S+ G DT
Sbjct: 30 ATMGQGEQDHFVLKS-GHAMPAVGLGT------WRAG--SDTAHSVRTAITEAGYRHVDT 80
Query: 61 ADVYGQNANEVLLGKALKQ-----LPREKIQVATKFGIAGIGVAGVIVKGAPDYVRSCCE 115
A YG E +GK LK + R+ + V +K AP+ VR E
Sbjct: 81 AAEYG---VEKEVGKGLKAAMEAGIDRKDLFVTSKIWCT---------NLAPERVRPALE 128
Query: 116 ASLKRLDVDYIDLYYQH---------------RVDTSVPIEETIGEMKKLVEEGKIKYIG 160
+LK L +DYIDLY+ H +E EM+ LV++G +K IG
Sbjct: 129 NTLKDLQLDYIDLYHIHWPFRLKDGAHMPPEAGEVLEFDMEGVWKEMENLVKDGLVKDIG 188
Query: 161 LSEASPGTIRR--AHAVHPITAVQMEWS-LWTRDIEEEIIPLCRELGIGIVPYSPLGRGF 217
+ + + R A P QME W ++I C++ GI I YSPLG
Sbjct: 189 VCNYTVTKLNRLLRSAKIPPAVCQMEMHPGWKN---DKIFEACKKHGIHITAYSPLGS-- 243
Query: 218 FGGKAVVEN 226
K + +
Sbjct: 244 -SEKNLAHD 251
|
| >3buv_A 3-OXO-5-beta-steroid 4-dehydrogenase; 5-beta-reductase, catalytic tetrad, hepes, NADP, bIle catabolism, disease mutation, lipid metabolism; HET: NAP EPE; 1.35A {Homo sapiens} PDB: 3bur_A* 3bv7_A* 3caq_A* 3cas_A* 3cav_A* 3g1r_A* 3cot_A* 3dop_A* 3cmf_A* 3uzx_A* 3uzw_A* 3uzy_A* 3uzz_A* Length = 326 | Back alignment and structure |
|---|
Score = 97.6 bits (244), Expect = 4e-24
Identities = 53/248 (21%), Positives = 87/248 (35%), Gaps = 62/248 (25%)
Query: 5 KHQVPRVKLGTQGLEVSKLGYGCMNLSGGYSSPVSEEDG--ISMIKHAFSKGITFFDTAD 62
R+ L G + +G G YS P S G + +K A G D A
Sbjct: 4 SAASHRIPLSD-GNSIPIIGLGT------YSEPKSTPKGACATSVKVAIDTGYRHIDGAY 56
Query: 63 VYGQNANEVLLGKALKQL------PREKIQVATK----FGIAGIGVAGVIVKGAPDYVRS 112
+Y NE +G+A+++ RE I K P+ VR
Sbjct: 57 IYQ---NEHEVGEAIREKIAEGKVRREDIFYCGKLWATNH-------------VPEMVRP 100
Query: 113 CCEASLKRLDVDYIDLYYQH-------------------RVDTSVPIEETIGEMKKLVEE 153
E +L+ L +DY+DLY + + T M+ +
Sbjct: 101 TLERTLRVLQLDYVDLYIIEVPMAFKPGDEIYPRDENGKWLYHKSNLCATWEAMEACKDA 160
Query: 154 GKIKYIGLSEASPGTIRR----AHAVHPITAVQME-WSLWTRDIEEEIIPLCRELGIGIV 208
G +K +G+S + + H + Q+E +T + +++ C++ I I
Sbjct: 161 GLVKSLGVSNFNRRQLELILNKPGLKHKPVSNQVECHPYFT---QPKLLKFCQQHDIVIT 217
Query: 209 PYSPLGRG 216
YSPLG
Sbjct: 218 AYSPLGTS 225
|
| >1s1p_A Aldo-keto reductase family 1 member C3; TIM-barrel, oxidoreductase; HET: NAP; 1.20A {Homo sapiens} SCOP: c.1.7.1 PDB: 1s1r_A* 1s2a_A* 1s2c_A* 3uwe_A* 3r58_A* 3r43_A* 3r7m_A* 3r6i_A* 3r8h_A* 3r94_A* 3r8g_A* 1zq5_A* 1ry8_A* 1xf0_A* 1ry0_A* 2f38_A* 2fgb_A* 4dbs_A* 4dbu_A* 3gug_A* ... Length = 331 | Back alignment and structure |
|---|
Score = 96.1 bits (240), Expect = 2e-23
Identities = 55/244 (22%), Positives = 85/244 (34%), Gaps = 59/244 (24%)
Query: 7 QVPRVKLGTQGLEVSKLGYGCMNLSGGYSSPVSEEDGISMIKHAFSKGITFFDTADVYGQ 66
+ VKL G + LG+G V + + K A G D+A +Y
Sbjct: 4 KQQCVKLND-GHFMPVLGFGTYA-----PPEVPRSKALEVTKLAIEAGFRHIDSAHLYN- 56
Query: 67 NANEVLLGKALKQL------PREKIQVATK----FGIAGIGVAGVIVKGAPDYVRSCCEA 116
NE +G A++ RE I +K F P+ VR E
Sbjct: 57 --NEEQVGLAIRSKIADGSVKREDIFYTSKLWSTFH-------------RPELVRPALEN 101
Query: 117 SLKRLDVDYIDLYYQH-------------------RVDTSVPIEETIGEMKKLVEEGKIK 157
SLK+ +DY+DLY H + V + T M+K + G K
Sbjct: 102 SLKKAQLDYVDLYLIHSPMSLKPGEELSPTDENGKVIFDIVDLCTTWEAMEKCKDAGLAK 161
Query: 158 YIGLSEASPGTIRR----AHAVHPITAVQME-WSLWTRDIEEEIIPLCRELGIGIVPYSP 212
IG+S + + + Q+E + R +++ C+ I +V YS
Sbjct: 162 SIGVSNFNRRQLEMILNKPGLKYKPVCNQVECHPYFNR---SKLLDFCKSKDIVLVAYSA 218
Query: 213 LGRG 216
LG
Sbjct: 219 LGSQ 222
|
| >1mi3_A Xylose reductase, XR; aldo-keto reductase, beta-alpha barrel, dimer, oxidoreductase; HET: NAD; 1.80A {Candida tenuis} SCOP: c.1.7.1 PDB: 1jez_A* 1k8c_A* 1ye6_A* 1ye4_A* 1sm9_A* 1r38_A* 1z9a_A* Length = 322 | Back alignment and structure |
|---|
Score = 92.6 bits (231), Expect = 2e-22
Identities = 58/250 (23%), Positives = 91/250 (36%), Gaps = 66/250 (26%)
Query: 7 QVPRVKLGTQGLEVSKLGYGCMNLSGGYSSPVSEEDGISMIKHAFSKGITFFDTADVYGQ 66
+P +KL + G + +G+GC + + A G FD A+ YG
Sbjct: 4 SIPDIKLSS-GHLMPSIGFGC------WKLA--NATAGEQVYQAIKAGYRLFDGAEDYG- 53
Query: 67 NANEVLLGKALKQ------LPREKIQVATK----FGIAGIGVAGVIVKGAPDYVRSCCEA 116
NE +G +K+ + RE+I + +K + P V +
Sbjct: 54 --NEKEVGDGVKRAIDEGLVKREEIFLTSKLWNNYH-------------DPKNVETALNK 98
Query: 117 SLKRLDVDYIDLYYQH-------------------------RVDTSVPIEETIGEMKKLV 151
+L L VDY+DL+ H V VPI ET ++KLV
Sbjct: 99 TLADLKVDYVDLFLIHFPIAFKFVPIEEKYPPGFYCGDGNNFVYEDVPILETWKALEKLV 158
Query: 152 EEGKIKYIGLSEASPGTIRR--AHAVHPITAVQME-WSLWTRDIEEEIIPLCRELGIGIV 208
GKIK IG+S + A +Q+E + ++I ++ G+ I
Sbjct: 159 AAGKIKSIGVSNFPGALLLDLLRGATIKPAVLQVEHHPYLQQ---PKLIEFAQKAGVTIT 215
Query: 209 PYSPLGRGFF 218
YS G F
Sbjct: 216 AYSSFGPQSF 225
|
| >1afs_A 3-alpha-HSD, 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, NAD; HET: NAP TES; 2.50A {Rattus norvegicus} SCOP: c.1.7.1 PDB: 1lwi_A* Length = 323 | Back alignment and structure |
|---|
Score = 92.6 bits (231), Expect = 2e-22
Identities = 56/243 (23%), Positives = 91/243 (37%), Gaps = 61/243 (25%)
Query: 9 PRVKLGTQGLEVSKLGYGCMNLSGGYSSP-VSEEDGISMIKHAFSKGITFFDTADVYGQN 67
RV L G + LG+G V++++ I K A G FD+A +Y
Sbjct: 6 LRVALND-GNFIPVLGFGT------TVPEKVAKDEVIKATKIAIDNGFRHFDSAYLYE-- 56
Query: 68 ANEVLLGKALKQ------LPREKIQVATK----FGIAGIGVAGVIVKGAPDYVRSCCEAS 117
E +G+A++ + RE I +K F P+ VR+C E +
Sbjct: 57 -VEEEVGQAIRSKIEDGTVKREDIFYTSKLWSTFH-------------RPELVRTCLEKT 102
Query: 118 LKRLDVDYIDLYYQH-------------------RVDTSVPIEETIGEMKKLVEEGKIKY 158
LK +DY+DLY H + +V I +T M+K + G K
Sbjct: 103 LKSTQLDYVDLYIIHFPMALQPGDIFFPRDEHGKLLFETVDICDTWEAMEKCKDAGLAKS 162
Query: 159 IGLSEASPGTIRR----AHAVHPITAVQME-WSLWTRDIEEEIIPLCRELGIGIVPYSPL 213
IG+S + + R + Q+E + +++ C+ I +V Y L
Sbjct: 163 IGVSNFNCRQLERILNKPGLKYKPVCNQVECHLYLNQ---SKMLDYCKSKDIILVSYCTL 219
Query: 214 GRG 216
G
Sbjct: 220 GSS 222
|
| >3h7u_A Aldo-keto reductase; stress response, NADP, drought tolerance, oxidoreductase; HET: NAP; 1.25A {Arabidopsis thaliana} Length = 335 | Back alignment and structure |
|---|
Score = 92.7 bits (231), Expect = 2e-22
Identities = 57/251 (22%), Positives = 90/251 (35%), Gaps = 52/251 (20%)
Query: 1 MAEEKHQVPRVKLGTQGLEVSKLGYGCMNLSGGYSSPVSEEDGISMIKHAFSKGITFFDT 60
MA + + KL T G + +G G + + + A G D
Sbjct: 21 MA---NAITFFKLNT-GAKFPSVGLGT------WQAS--PGLVGDAVAAAVKIGYRHIDC 68
Query: 61 ADVYGQNANEVLLGKALKQ------LPREKIQVATKFGIAGIGVAGVIVKGAPDYVRSCC 114
A +YG NE +G LK+ + RE + + +K P V
Sbjct: 69 AQIYG---NEKEIGAVLKKLFEDRVVKREDLFITSKLWCT---------DHDPQDVPEAL 116
Query: 115 EASLKRLDVDYIDLYYQH--------------RVDTSVPIEETIGEMKKLVEEGKIKYIG 160
+LK L ++Y+DLY H V I T M+ L + GK + IG
Sbjct: 117 NRTLKDLQLEYVDLYLIHWPARIKKGSVGIKPENLLPVDIPSTWKAMEALYDSGKARAIG 176
Query: 161 LSEASPGTIRR--AHAVHPITAVQMEWS-LWTRDIEEEIIPLCRELGIGIVPYSPLGRG- 216
+S S + A P Q+E W + ++ C+ G+ + YSPLG
Sbjct: 177 VSNFSTKKLADLLELARVPPAVNQVECHPSWRQ---TKLQEFCKSKGVHLSAYSPLGSPG 233
Query: 217 -FFGGKAVVEN 226
+ V++N
Sbjct: 234 TTWLKSDVLKN 244
|
| >1us0_A Aldose reductase; oxidoreductase, NADP, IDD594; HET: NDP LDT CIT; 0.66A {Homo sapiens} SCOP: c.1.7.1 PDB: 1pwl_A* 1t41_A* 1pwm_A* 1x96_A* 1x97_A* 1x98_A* 1z89_A* 1z8a_A* 2dux_A* 2duz_A* 2dv0_A* 2fz8_A* 2fz9_A* 2fzb_A* 2fzd_A* 2hv5_A* 2hvn_A* 2hvo_A* 2i16_A* 2i17_A* ... Length = 316 | Back alignment and structure |
|---|
Score = 92.2 bits (230), Expect = 3e-22
Identities = 59/242 (24%), Positives = 94/242 (38%), Gaps = 62/242 (25%)
Query: 9 PRVKLGTQGLEVSKLGYGCMNLSGGYSSPVSEEDGISMIKHAFSKGITFFDTADVYGQNA 68
R+ L G ++ LG G + SP +K A G D A VY
Sbjct: 3 SRILLNN-GAKMPILGLGT------WKSP--PGQVTEAVKVAIDVGYRHIDCAHVYQ--- 50
Query: 69 NEVLLGKALKQ------LPREKIQVATK----FGIAGIGVAGVIVKGAPDYVRSCCEASL 118
NE +G A+++ + RE++ + +K + V+ C+ +L
Sbjct: 51 NENEVGVAIQEKLREQVVKREELFIVSKLWCTYH-------------EKGLVKGACQKTL 97
Query: 119 KRLDVDYIDLYYQH-------------------RVDTSVPIEETIGEMKKLVEEGKIKYI 159
L +DY+DLY H V + I +T M++LV+EG +K I
Sbjct: 98 SDLKLDYLDLYLIHWPTGFKPGKEFFPLDESGNVVPSDTNILDTWAAMEELVDEGLVKAI 157
Query: 160 GLSEASPGTIRR--AHAVHPIT-AV-QME-WSLWTRDIEEEIIPLCRELGIGIVPYSPLG 214
G+S + + AV Q+E T+ E++I C+ GI + YSPLG
Sbjct: 158 GISNFNHLQVEMILNKPGLKYKPAVNQIECHPYLTQ---EKLIQYCQSKGIVVTAYSPLG 214
Query: 215 RG 216
Sbjct: 215 SP 216
|
| >2wzm_A Aldo-keto reductase; oxidoreductase; HET: NA7; 1.64A {Mycobacterium smegmatis} PDB: 2wzt_A Length = 283 | Back alignment and structure |
|---|
Score = 91.8 bits (229), Expect = 3e-22
Identities = 54/218 (24%), Positives = 86/218 (39%), Gaps = 36/218 (16%)
Query: 8 VPRVKLGTQGLEVSKLGYGCMNLSGGYSSPVSEEDGISMIKHAFSKGITFFDTADVYGQN 67
+P V L + +G G +S+ + + A G DTA YG
Sbjct: 11 IPTVTL-NDDNTLPVVGIGV------G--ELSDSEAERSVSAALEAGYRLIDTAAAYG-- 59
Query: 68 ANEVLLGKALKQ--LPREKIQVATKFGIAGIGVAGVIVKGAPDYVRSCCEASLKRLDVDY 125
NE +G+A+ +PR++I V TK G ++ ASL+RL +DY
Sbjct: 60 -NEAAVGRAIAASGIPRDEIYVTTKLATPDQG---------FTSSQAAARASLERLGLDY 109
Query: 126 IDLYYQH----RVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPGTIRRAHAVHPIT-A 180
+DLY H V ++ G + K+ E+G + IG+ + ++ T A
Sbjct: 110 VDLYLIHWPGGDTSKYV---DSWGGLMKVKEDGIARSIGVCNFGAEDLETIVSLTYFTPA 166
Query: 181 V-QMEWS-LWTRDIEEEIIPLCRELGIGIVPYSPLGRG 216
V Q+E L + + + I Y PLG G
Sbjct: 167 VNQIELHPLLNQ---AALREVNAGYNIVTEAYGPLGVG 201
|
| >1vp5_A 2,5-diketo-D-gluconic acid reductase; TM1009, structural genomics, joint center for structural genomics, PSI, protein structure initiative; HET: NAP; 2.40A {Thermotoga maritima} SCOP: c.1.7.1 Length = 298 | Back alignment and structure |
|---|
Score = 91.9 bits (229), Expect = 3e-22
Identities = 60/222 (27%), Positives = 95/222 (42%), Gaps = 41/222 (18%)
Query: 7 QVPRVKLGTQGLEVSKLGYGCMNLSGGYSSPVSEEDGISMIKHAFSKGITFFDTADVYGQ 66
QVP+V L G+E+ LGYG + E + A G DTA Y
Sbjct: 14 QVPKVTLNN-GVEMPILGYGVFQ--------IPPEKTEECVYEAIKVGYRLIDTAASYM- 63
Query: 67 NANEVLLGKALKQ------LPREKIQVATKFGIAGIGVAGVIVKGAPDYVRSCCEASLKR 120
NE +G+A+K+ + RE++ V TK ++ +G + + E SLK+
Sbjct: 64 --NEEGVGRAIKRAIDEGIVRREELFVTTKLWVSDVG---------YESTKKAFEKSLKK 112
Query: 121 LDVDYIDLYYQHRVDTSVPIEETIG---EMKKLVEEGKIKYIGLSEASPGTIRRAHAVHP 177
L ++YIDLY H+ P + M+++ ++G ++ IG+S P + H
Sbjct: 113 LQLEYIDLYLIHQ-----PFGDVHCAWKAMEEMYKDGLVRAIGVSNFYPDRLMDLMVHHE 167
Query: 178 IT-AV-QMEWS-LWTRDIEEEIIPLCRELGIGIVPYSPLGRG 216
I AV Q+E + R +E I R I + P G
Sbjct: 168 IVPAVNQIEIHPFYQR---QEEIEFMRNYNIQPEAWGPFAEG 206
|
| >3o3r_A Aldo-keto reductase family 1, member B7; aldose reductase like protein, AKR1B14, oxidoreductase; HET: NAP; 1.86A {Rattus norvegicus} PDB: 3qkz_A* Length = 316 | Back alignment and structure |
|---|
Score = 91.4 bits (228), Expect = 6e-22
Identities = 54/243 (22%), Positives = 91/243 (37%), Gaps = 62/243 (25%)
Query: 8 VPRVKLGTQGLEVSKLGYGCMNLSGGYSSPVSEEDGISMIKHAFSKGITFFDTADVYGQN 67
VKL T ++ +G G + SP +K A G FD A VY
Sbjct: 2 TTFVKLRT-KAKMPLVGLGT------WKSP--PGQVKEAVKAAIDAGYRHFDCAYVYQ-- 50
Query: 68 ANEVLLGKALKQ------LPREKIQVATK----FGIAGIGVAGVIVKGAPDYVRSCCEAS 117
NE +G+A+++ + RE + + +K F ++ + +
Sbjct: 51 -NESEVGEAIQEKIKEKAVRREDLFIVSKLWSTFF-------------EKSLMKEAFQKT 96
Query: 118 LKRLDVDYIDLYYQH-------------------RVDTSVPIEETIGEMKKLVEEGKIKY 158
L L +DY+DLY H + + + M++LV++G +K
Sbjct: 97 LSDLKLDYLDLYLIHWPQGLQAGKEFLPKDSQGKVLMSKSTFLDAWEGMEELVDQGLVKA 156
Query: 159 IGLSEASPGTIRR--AHAVHPIT-AV-QME-WSLWTRDIEEEIIPLCRELGIGIVPYSPL 213
+G+S + I R Q+E T+ E++I C GI ++ YSPL
Sbjct: 157 LGVSNFNHFQIERLLNKPGLKHKPVTNQVECHPYLTQ---EKLIQYCHSKGIAVIAYSPL 213
Query: 214 GRG 216
G
Sbjct: 214 GSP 216
|
| >3krb_A Aldose reductase; ssgcid, SBRI, emerald biostructures, university of washingto niaid, oxidoreductase, S genomics; HET: NAP; 1.75A {Giardia lamblia} Length = 334 | Back alignment and structure |
|---|
Score = 91.5 bits (228), Expect = 7e-22
Identities = 55/253 (21%), Positives = 95/253 (37%), Gaps = 66/253 (26%)
Query: 1 MAEEKHQVPRVKLGTQGLEVSKLGYGCMNLSGGYSSPVSEEDGISMIKHAFSKGITFFDT 60
M + G+ +LG+G + +P E + ++ A G D
Sbjct: 9 MGTLEA--QTQGPGS-MQYPPRLGFGT------WQAP--PEAVQTAVETALMTGYRHIDC 57
Query: 61 ADVYGQNANEVLLGKALKQ--------LPREKIQVATK----FGIAGIGVAGVIVKGAPD 108
A VY NE +G+A + + RE + + +K P+
Sbjct: 58 AYVYQ---NEEAIGRAFGKIFKDASSGIKREDVWITSKLWNYNH-------------RPE 101
Query: 109 YVRSCCEASLKRLDVDYIDLYYQH---------------------RVDTSVPIEETIGEM 147
VR C+ ++ L VDY+DL+ H + VP+ +T M
Sbjct: 102 LVREQCKKTMSDLQVDYLDLFLVHWPLAFVRNDVGDLFPKDAEGRAMLEKVPLADTWRAM 161
Query: 148 KKLVEEGKIKYIGLSEASPGTIRR--AHAVHPITAVQMEWS-LWTRDIEEEIIPLCRELG 204
++LVEEG +K+IG+S + + +A Q+E + + C + G
Sbjct: 162 EQLVEEGLVKHIGVSNYTVPLLADLLNYAKIKPLVNQIEIHPWHPN---DATVKFCLDNG 218
Query: 205 IGIVPYSPLGRGF 217
IG+ YSP+G +
Sbjct: 219 IGVTAYSPMGGSY 231
|
| >3o0k_A Aldo/keto reductase; ssgcid, ALS collaborative crystallography; 1.80A {Brucella melitensis biovar} Length = 283 | Back alignment and structure |
|---|
Score = 90.3 bits (225), Expect = 9e-22
Identities = 62/219 (28%), Positives = 95/219 (43%), Gaps = 36/219 (16%)
Query: 7 QVPRVKLGTQGLEVSKLGYGCMNLSGGYSSPVSEEDGISMIKHAFSKGITFFDTADVYGQ 66
VP VKL G + +LGYG + +S ++ +S + A G DTA +YG
Sbjct: 25 TVPTVKL-NDGNHIPQLGYGV------W--QISNDEAVSAVSEALKAGYRHIDTATIYG- 74
Query: 67 NANEVLLGKALKQ--LPREKIQVATKFGIAGIGVAGVIVKGAPDYVRSCCEASLKRLDVD 124
NE +GKA+ + R I + TK + G + + SLK+L D
Sbjct: 75 --NEEGVGKAINGSGIARADIFLTTKLWNSDQG---------YESTLKAFDTSLKKLGTD 123
Query: 125 YIDLYYQH----RVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPGTIRRAHAVHPIT- 179
Y+DLY H D + ET KL EEG++K IG+S + R +T
Sbjct: 124 YVDLYLIHWPMPSKDLFM---ETWRAFIKLKEEGRVKSIGVSNFRTADLERLIKESGVTP 180
Query: 180 AV-QMEWS-LWTRDIEEEIIPLCRELGIGIVPYSPLGRG 216
+ Q+E + + +E+ + I +SPLG+G
Sbjct: 181 VLNQIELHPQFQQ---DELRLFHGKHDIATEAWSPLGQG 216
|
| >4f40_A Prostaglandin F2-alpha synthase/D-arabinose dehyd; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: CIT; 1.60A {Leishmania major} Length = 288 | Back alignment and structure |
|---|
Score = 90.3 bits (225), Expect = 1e-21
Identities = 56/224 (25%), Positives = 95/224 (42%), Gaps = 35/224 (15%)
Query: 5 KHQVPRVKLGTQGLEVSKLGYGCMNLSGGYSSPVSEEDGISMIKHAFSKGITFFDTADVY 64
V L + G+++ + G G + SP + E + +K A G DTA +Y
Sbjct: 7 GVDKAMVTL-SNGVKMPQFGLGV------WQSP-AGEVTENAVKWALCAGYRHIDTAAIY 58
Query: 65 GQNANEVLLGKALKQ--LPREKIQVATKFGIAGIGVAGVIVKGAPDYVRSCCEASLKRLD 122
NE +G L+ +PRE + + TK G + + E S ++L
Sbjct: 59 K---NEESVGAGLRASGVPREDVFITTKLWNTEQG---------YESTLAAFEESRQKLG 106
Query: 123 VDYIDLYYQH----RVDTSVPIEETIG---EMKKLVEEGKIKYIGLSEASPGTIRRAHAV 175
VDYIDLY H + S ++ + ++L +E K++ IG+S + A+
Sbjct: 107 VDYIDLYLIHWPRGKDILSKEGKKYLDSWRAFEQLYKEKKVRAIGVSNFHIHHLEDVLAM 166
Query: 176 HPIT-AV-QMEWS-LWTRDIEEEIIPLCRELGIGIVPYSPLGRG 216
+T V Q+E L + ++ C I + +SPLG+G
Sbjct: 167 CTVTPMVNQVELHPLNNQ---ADLRAFCDAKQIKVEAWSPLGQG 207
|
| >3h7r_A Aldo-keto reductase; stress response, NADP, drought tolerance, oxidoreductase; HET: NAP; 1.40A {Arabidopsis thaliana} Length = 331 | Back alignment and structure |
|---|
Score = 91.1 bits (227), Expect = 1e-21
Identities = 59/238 (24%), Positives = 93/238 (39%), Gaps = 54/238 (22%)
Query: 1 MAEEKHQVPRVKLGTQGLEVSKLGYGCMNLSGGYSSPVSEEDGISMIKHAFSKGITFFDT 60
MA + +L T G ++ +G G Y+ V+ I+ A G D
Sbjct: 21 MAA---PIRFFELNT-GAKLPCVGLGT------YAM-VATA-----IEQAIKIGYRHIDC 64
Query: 61 ADVYGQNANEVLLGKALKQL------PREKIQVATKFGIAGIGVAGVIVKGAPDYVRSCC 114
A +YG NE +G LK+L RE++ + +K P+ V
Sbjct: 65 ASIYG---NEKEIGGVLKKLIGDGFVKREELFITSKLWSN---------DHLPEDVPKAL 112
Query: 115 EASLKRLDVDYIDLYYQH--------------RVDTSVPIEETIGEMKKLVEEGKIKYIG 160
E +L+ L +DY+DLY H + T I T M+ L + GK + IG
Sbjct: 113 EKTLQDLQIDYVDLYLIHWPASLKKESLMPTPEMLTKPDITSTWKAMEALYDSGKARAIG 172
Query: 161 LSEASPGTIRR--AHAVHPITAVQMEWS-LWTRDIEEEIIPLCRELGIGIVPYSPLGR 215
+S S + A Q+E +W + + + LC+ G+ + YSPLG
Sbjct: 173 VSNFSSKKLTDLLNVARVTPAVNQVECHPVWQQ---QGLHELCKSKGVHLSGYSPLGS 227
|
| >1hw6_A 2,5-diketo-D-gluconic acid reductase; aldo-keto reductase, TIM barrel, oxidoreductase; 1.90A {Corynebacterium SP} SCOP: c.1.7.1 PDB: 1a80_A* 1m9h_A* Length = 278 | Back alignment and structure |
|---|
Score = 89.9 bits (224), Expect = 1e-21
Identities = 54/218 (24%), Positives = 83/218 (38%), Gaps = 36/218 (16%)
Query: 8 VPRVKLGTQGLEVSKLGYGCMNLSGGYSSPVSEEDGISMIKHAFSKGITFFDTADVYGQN 67
VP + L G + +LGYG + V D ++ A G DTA +YG
Sbjct: 3 VPSIVL-NDGNSIPQLGYGV------F--KVPPADTQRAVEEALEVGYRHIDTAAIYG-- 51
Query: 68 ANEVLLGKALKQ--LPREKIQVATKFGIAGIGVAGVIVKGAPDYVRSCCEASLKRLDVDY 125
NE +G A+ + R+ + + TK D + SL +L +D
Sbjct: 52 -NEEGVGAAIAASGIARDDLFITTKLWNDRHD---------GDEPAAAIAESLAKLALDQ 101
Query: 126 IDLYYQH----RVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPGTIRRAHAVHPIT-A 180
+DLY H D V +M +L G + IG+S + R A + A
Sbjct: 102 VDLYLVHWPTPAADNYV---HAWEKMIELRAAGLTRSIGVSNHLVPHLERIVAATGVVPA 158
Query: 181 V-QMEWS-LWTRDIEEEIIPLCRELGIGIVPYSPLGRG 216
V Q+E + + EI + I + PLG+G
Sbjct: 159 VNQIELHPAYQQ---REITDWAAAHDVKIESWGPLGQG 193
|
| >1vbj_A Prostaglandin F synthase; TIM barrel, oxidoreductase; HET: NAP CIT; 2.10A {Trypanosoma brucei} Length = 281 | Back alignment and structure |
|---|
Score = 88.4 bits (220), Expect = 4e-21
Identities = 54/224 (24%), Positives = 91/224 (40%), Gaps = 37/224 (16%)
Query: 2 AEEKHQVPRVKLGTQGLEVSKLGYGCMNLSGGYSSPVSEEDGISMIKHAFSKGITFFDTA 61
E +KL + G+ + LG+G + E + A G DTA
Sbjct: 3 PEFMALTQSLKL-SNGVMMPVLGFGM------WKLQDGNE-AETATMWAIKSGYRHIDTA 54
Query: 62 DVYGQNANEVLLGKALKQ--LPREKIQVATKFGIAGIGVAGVIVKGAPDYVRSCCEASLK 119
+Y NE G+A+ +PRE++ V TK + G + S E S+K
Sbjct: 55 AIYK---NEESAGRAIASCGVPREELFVTTKLWNSDQG---------YESTLSAFEKSIK 102
Query: 120 RLDVDYIDLYYQHRVDTSVPIEETIGE----MKKLVEEGKIKYIGLSEASPGTIRRAHAV 175
+L ++Y+DLY H P ++ + +KL + K++ IG+S I
Sbjct: 103 KLGLEYVDLYLIHW-----PGKDKFIDTWKAFEKLYADKKVRAIGVSNFHEHHIEELLKH 157
Query: 176 HPIT-AV-QMEWS-LWTRDIEEEIIPLCRELGIGIVPYSPLGRG 216
+ V Q+E L + + + C+ I + +SPLG+G
Sbjct: 158 CKVAPMVNQIELHPLLNQ---KALCEYCKSKNIAVTAWSPLGQG 198
|
| >1mzr_A 2,5-diketo-D-gluconate reductase A; alpha/beta-barrel, aldo-ketoreductase, NADPH dependant, BACT targets at IGS-CNRS, france, BIGS; 2.13A {Escherichia coli} SCOP: c.1.7.1 Length = 296 | Back alignment and structure |
|---|
Score = 88.4 bits (220), Expect = 6e-21
Identities = 60/219 (27%), Positives = 88/219 (40%), Gaps = 38/219 (17%)
Query: 7 QVPRVKLGTQGLEVSKLGYGCMNLSGGYSSPVSEEDGISMIKHAFSKGITFFDTADVYGQ 66
+KL G + +LG G + S E+ I+ I+ A G DTA Y
Sbjct: 24 NPTVIKL-QDGNVMPQLGLGV------W--QASNEEVITAIQKALEVGYRSIDTAAAYK- 73
Query: 67 NANEVLLGKALKQ--LPREKIQVATKFGIAGIGVAGVIVKGAPDYVRSCCEASLKRLDVD 124
NE +GKALK + RE++ + TK R SLK+L +D
Sbjct: 74 --NEEGVGKALKNASVNREELFITTKLWNDDH-----------KRPREALLDSLKKLQLD 120
Query: 125 YIDLYYQH----RVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPGTIRRAHAVHPIT- 179
YIDLY H +D V E M +L +EG IK IG+ ++R +T
Sbjct: 121 YIDLYLMHWPVPAIDHYV---EAWKGMIELQKEGLIKSIGVCNFQIHHLQRLIDETGVTP 177
Query: 180 AV-QMEWS-LWTRDIEEEIIPLCRELGIGIVPYSPLGRG 216
+ Q+E L + ++ I +SPL +G
Sbjct: 178 VINQIELHPLMQQ---RQLHAWNATHKIQTESWSPLAQG 213
|
| >4gie_A Prostaglandin F synthase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: NAP; 1.25A {Trypanosoma cruzi} PDB: 4fzi_A* Length = 290 | Back alignment and structure |
|---|
Score = 88.0 bits (219), Expect = 8e-21
Identities = 54/221 (24%), Positives = 93/221 (42%), Gaps = 37/221 (16%)
Query: 5 KHQVPRVKLGTQGLEVSKLGYGCMNLSGGYSSPVSEEDGISMIKHAFSKGITFFDTADVY 64
V L + + +LG G + + E + ++ A G DTA +Y
Sbjct: 10 NCNYNCVTL-HNSVRMPQLGLGV------WRAQDGAE-TANAVRWAIEAGYRHIDTAYIY 61
Query: 65 GQNANEVLLGKALKQ--LPREKIQVATKFGIAGIGVAGVIVKGAPDYVRSCCEASLKRLD 122
NE +G+ +++ +PRE++ V TK + G + + E S + L
Sbjct: 62 S---NERGVGQGIRESGVPREEVWVTTKVWNSDQG---------YEKTLAAFERSRELLG 109
Query: 123 VDYIDLYYQHRVDTSVPIEETIGE----MKKLVEEGKIKYIGLSEASPGTIRRAHAVHPI 178
++YIDLY H P ++ + ++KL EE K++ IG+S P + I
Sbjct: 110 LEYIDLYLIHW-----PGKKKFVDTWKALEKLYEEKKVRAIGVSNFEPHHLTELFKSCKI 164
Query: 179 T-AV-QMEWS-LWTRDIEEEIIPLCRELGIGIVPYSPLGRG 216
V Q+E L+ + + C++ I I +SPLG G
Sbjct: 165 RPMVNQVELHPLFQQ---RTLREFCKQHNIAITAWSPLGSG 202
|
| >3f7j_A YVGN protein; aldo-keto reductase, oxidoreductase; 1.70A {Bacillus subtilis} PDB: 3d3f_A* Length = 276 | Back alignment and structure |
|---|
Score = 86.4 bits (215), Expect = 2e-20
Identities = 56/221 (25%), Positives = 93/221 (42%), Gaps = 37/221 (16%)
Query: 5 KHQVPRVKLGTQGLEVSKLGYGCMNLSGGYSSPVSEEDGISMIKHAFSKGITFFDTADVY 64
VKL G+E+ G G + E +K A G DTA +Y
Sbjct: 3 TSLKDTVKL-HNGVEMPWFGLGV------FKVENGNE-ATESVKAAIKNGYRSIDTAAIY 54
Query: 65 GQNANEVLLGKALKQ--LPREKIQVATKFGIAGIGVAGVIVKGAPDYVRSCCEASLKRLD 122
NE +G +K+ + RE++ + +K G + + E SL+RL
Sbjct: 55 K---NEEGVGIGIKESGVAREELFITSKVWNEDQG---------YETTLAAFEKSLERLQ 102
Query: 123 VDYIDLYYQHRVDTSVPIEETIGE----MKKLVEEGKIKYIGLSEASPGTIRRAHAVHPI 178
+DY+DLY H P ++ + ++KL ++GKI+ IG+S + I
Sbjct: 103 LDYLDLYLIHW-----PGKDKYKDTWRALEKLYKDGKIRAIGVSNFQVHHLEELLKDAEI 157
Query: 179 T-AV-QMEWS-LWTRDIEEEIIPLCRELGIGIVPYSPLGRG 216
V Q+E+ T+ +E+ C+ GI + +SPL +G
Sbjct: 158 KPMVNQVEFHPRLTQ---KELRDYCKGQGIQLEAWSPLMQG 195
|
| >3ln3_A Dihydrodiol dehydrogenase; putative reductase, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; HET: MLY MSE NAD; 1.18A {Mus musculus} Length = 324 | Back alignment and structure |
|---|
Score = 73.1 bits (179), Expect = 3e-15
Identities = 49/238 (20%), Positives = 79/238 (33%), Gaps = 49/238 (20%)
Query: 8 VPRVKLGTQGLEVSKLGYGCMNLSGGYSSPVSEEDGISMIKHAFSKGITFFDTADVYGQN 67
V L G + LG+G V + A G DTA Y
Sbjct: 6 QHCVXLND-GHLIPALGFGT-----YXPXEVPXSXSLEAACLALDVGYRHVDTAYAYQ-- 57
Query: 68 ANEVLLGKALKQ------LPREKIQVATKFGIAGIGVAGVIVKGAPDYVRSCCEASLKRL 121
E +G+A++ + RE + V TK P+ V E SL L
Sbjct: 58 -VEEEIGQAIQSXIXAGVVXREDLFVTTKLWCT---------CFRPELVXPALEXSLXXL 107
Query: 122 DVDYIDLYYQH-------------------RVDTSVPIEETIGEMKKLVEEGKIKYIGLS 162
+DY+DLY H + +V +T +++ + G + IG+S
Sbjct: 108 QLDYVDLYIMHYPVPMXSGDNDFPVNEQGXSLLDTVDFCDTWERLEECXDAGLVXSIGVS 167
Query: 163 EASPGTIRR----AHAVHPITAVQMEWSLWTRDIEEEIIPLCRELGIGIVPYSPLGRG 216
+ + R + Q+E L+ + ++ C I +V Y LG
Sbjct: 168 NFNHRQLERILNXPGLXYXPVCNQVECHLYLN--QRXLLDYCESXDIVLVAYGALGTQ 223
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 41.4 bits (96), Expect = 2e-04
Identities = 25/182 (13%), Positives = 60/182 (32%), Gaps = 59/182 (32%)
Query: 30 LSGGYSSPVSEEDGISMIKHAFSKGITFFDTADVYGQNANEVLLGKALKQLPREKIQVAT 89
LS ++ +S + S +T + + + L + LPRE +
Sbjct: 281 LSAATTTHISLDH--------HSMTLTPDEVKSLLLKY-----LDCRPQDLPREVLTTNP 327
Query: 90 KFGIAGIGVAGVIVKGAPDYVRSCCEASLKRLDVDYIDLYYQHR--------VDTSVPIE 141
++ I S++ + D ++H +++S+ +
Sbjct: 328 -RRLSIIA------------------ESIRD-GLATWD-NWKHVNCDKLTTIIESSLNVL 366
Query: 142 ETIGEMKKLVEEGKIKYIGLSEASPGTIRRAHAVHPITAVQMEWSLWTRDIEEEIIPLCR 201
E E +K+ + LS + A I + + +W I+ +++ +
Sbjct: 367 EP-AEYRKM-------FDRLS------VFPPSA--HIPTILLS-LIWFDVIKSDVMVVVN 409
Query: 202 EL 203
+L
Sbjct: 410 KL 411
|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 252 | |||
| 3v0s_A | 337 | Perakine reductase; AKR superfamily, oxidoreductas | 100.0 | |
| 1pyf_A | 312 | IOLS protein; beta-alpha barrel, aldo-keto reducta | 100.0 | |
| 3n2t_A | 348 | Putative oxidoreductase; aldo/keto reductase super | 100.0 | |
| 3n6q_A | 346 | YGHZ aldo-keto reductase; TIM barrel, oxidoreducta | 100.0 | |
| 1ynp_A | 317 | Oxidoreductase, AKR11C1; aldo-keto reductase, NADP | 100.0 | |
| 3erp_A | 353 | Putative oxidoreductase; funded by the national in | 100.0 | |
| 1pz1_A | 333 | GSP69, general stress protein 69; beta-alpha barre | 100.0 | |
| 3eau_A | 327 | Voltage-gated potassium channel subunit beta-2; kv | 100.0 | |
| 4exb_A | 292 | Putative uncharacterized protein; aldo-keto reduct | 100.0 | |
| 1ur3_M | 319 | Hypothetical oxidoreductase YDHF; NADP binding, al | 100.0 | |
| 3lut_A | 367 | Voltage-gated potassium channel subunit beta-2; vo | 100.0 | |
| 1lqa_A | 346 | TAS protein; TIM barrel, structure 2 function proj | 100.0 | |
| 3o0k_A | 283 | Aldo/keto reductase; ssgcid, ALS collaborative cry | 100.0 | |
| 3f7j_A | 276 | YVGN protein; aldo-keto reductase, oxidoreductase; | 100.0 | |
| 3b3e_A | 310 | YVGN protein; aldo-keto reductase, oxidoreductase; | 100.0 | |
| 3ln3_A | 324 | Dihydrodiol dehydrogenase; putative reductase, str | 100.0 | |
| 1hw6_A | 278 | 2,5-diketo-D-gluconic acid reductase; aldo-keto re | 100.0 | |
| 3up8_A | 298 | Putative 2,5-diketo-D-gluconic acid reductase B; n | 100.0 | |
| 1vbj_A | 281 | Prostaglandin F synthase; TIM barrel, oxidoreducta | 100.0 | |
| 1afs_A | 323 | 3-alpha-HSD, 3-alpha-hydroxysteroid dehydrogenase; | 100.0 | |
| 3buv_A | 326 | 3-OXO-5-beta-steroid 4-dehydrogenase; 5-beta-reduc | 100.0 | |
| 2wzm_A | 283 | Aldo-keto reductase; oxidoreductase; HET: NA7; 1.6 | 100.0 | |
| 4f40_A | 288 | Prostaglandin F2-alpha synthase/D-arabinose dehyd; | 100.0 | |
| 1s1p_A | 331 | Aldo-keto reductase family 1 member C3; TIM-barrel | 100.0 | |
| 2bp1_A | 360 | Aflatoxin B1 aldehyde reductase member 2; oxidored | 100.0 | |
| 1gve_A | 327 | Aflatoxin B1 aldehyde reductase member 3; oxidored | 100.0 | |
| 4gie_A | 290 | Prostaglandin F synthase; structural genomics, nia | 100.0 | |
| 1zgd_A | 312 | Chalcone reductase; polyketide, deoxychalcone, iso | 100.0 | |
| 3h7u_A | 335 | Aldo-keto reductase; stress response, NADP, drough | 100.0 | |
| 1qwk_A | 317 | Aldose reductase, aldo-keto reductase family 1 mem | 100.0 | |
| 1mi3_A | 322 | Xylose reductase, XR; aldo-keto reductase, beta-al | 100.0 | |
| 3o3r_A | 316 | Aldo-keto reductase family 1, member B7; aldose re | 100.0 | |
| 1mzr_A | 296 | 2,5-diketo-D-gluconate reductase A; alpha/beta-bar | 100.0 | |
| 1us0_A | 316 | Aldose reductase; oxidoreductase, NADP, IDD594; HE | 100.0 | |
| 3krb_A | 334 | Aldose reductase; ssgcid, SBRI, emerald biostructu | 100.0 | |
| 1vp5_A | 298 | 2,5-diketo-D-gluconic acid reductase; TM1009, stru | 100.0 | |
| 3h7r_A | 331 | Aldo-keto reductase; stress response, NADP, drough | 100.0 | |
| 2bgs_A | 344 | Aldose reductase; holoenzyme, aldo/keto reductase, | 100.0 | |
| 3b3d_A | 314 | YTBE protein, putative morphine dehydrogenase; ald | 100.0 | |
| 4gac_A | 324 | Alcohol dehydrogenase [NADP(+)]; TIM barrel, aldhe | 100.0 | |
| 3cf4_A | 807 | Acetyl-COA decarboxylase/synthase alpha subunit; m | 97.79 | |
| 2pgw_A | 384 | Muconate cycloisomerase; enolase superfamily, octa | 95.49 | |
| 1nu5_A | 370 | Chloromuconate cycloisomerase; enzyme, dehalogenat | 95.14 | |
| 1mdl_A | 359 | Mandelate racemase; isomerase, mandelate pathway, | 95.12 | |
| 2nql_A | 388 | AGR_PAT_674P, isomerase/lactonizing enzyme; enolas | 95.1 | |
| 2rdx_A | 379 | Mandelate racemase/muconate lactonizing enzyme, P; | 95.1 | |
| 3i4k_A | 383 | Muconate lactonizing enzyme; structural genomics, | 95.02 | |
| 2zad_A | 345 | Muconate cycloisomerase; muconate lactonizing enzy | 95.0 | |
| 2ovl_A | 371 | Putative racemase; structural genomics, PSI-2, pro | 94.86 | |
| 3ik4_A | 365 | Mandelate racemase/muconate lactonizing protein; s | 94.63 | |
| 1tkk_A | 366 | Similar to chloromuconate cycloisomerase; epimeras | 94.56 | |
| 2qgy_A | 391 | Enolase from the environmental genome shotgun sequ | 94.51 | |
| 3gd6_A | 391 | Muconate cycloisomerase; structural genomics, NYSG | 94.43 | |
| 3jva_A | 354 | Dipeptide epimerase; enolase superfamily, isomeras | 94.24 | |
| 2qde_A | 397 | Mandelate racemase/muconate lactonizing enzyme FA | 94.24 | |
| 2o56_A | 407 | Putative mandelate racemase; dehydratase, structur | 94.21 | |
| 2og9_A | 393 | Mandelate racemase/muconate lactonizing enzyme; NY | 94.15 | |
| 3eez_A | 378 | Putative mandelate racemase/muconate lactonizing e | 93.92 | |
| 3dg3_A | 367 | Muconate cycloisomerase; muconate lactonizing enzy | 93.87 | |
| 3i6e_A | 385 | Muconate cycloisomerase I; structural genomics, NY | 93.73 | |
| 1r0m_A | 375 | N-acylamino acid racemase; isomerase; 1.30A {Deino | 93.72 | |
| 2qdd_A | 378 | Mandelate racemase/muconate lactonizing enzyme; en | 93.7 | |
| 2p8b_A | 369 | Mandelate racemase/muconate lactonizing enzyme fam | 93.69 | |
| 2pp0_A | 398 | L-talarate/galactarate dehydratase; enolase superf | 93.59 | |
| 2poz_A | 392 | Putative dehydratase; octamer, structural genomics | 93.57 | |
| 2ps2_A | 371 | Putative mandelate racemase/muconate lactonizing e | 93.56 | |
| 3fv9_G | 386 | Mandelate racemase/muconate lactonizing enzyme; st | 93.55 | |
| 3q45_A | 368 | Mandelate racemase/muconate lactonizing enzyme FA | 93.42 | |
| 3s5s_A | 389 | Mandelate racemase/muconate lactonizing enzyme FA | 93.39 | |
| 2gl5_A | 410 | Putative dehydratase protein; structural genomics, | 93.35 | |
| 3bjs_A | 428 | Mandelate racemase/muconate lactonizing enzyme; en | 93.29 | |
| 3r0u_A | 379 | Enzyme of enolase superfamily; structural genomics | 92.95 | |
| 2zc8_A | 369 | N-acylamino acid racemase; octamer, TIM beta/alpha | 92.91 | |
| 3mwc_A | 400 | Mandelate racemase/muconate lactonizing protein; e | 92.82 | |
| 1sjd_A | 368 | N-acylamino acid racemase; lyase, isomerase; HET: | 92.78 | |
| 1rvk_A | 382 | Isomerase/lactonizing enzyme; enolase superfamily, | 92.76 | |
| 2ox4_A | 403 | Putative mandelate racemase; enolase, dehydratase, | 92.66 | |
| 3ozy_A | 389 | Putative mandelate racemase; beta-alpha barrel, en | 92.61 | |
| 4dwd_A | 393 | Mandelate racemase/muconate lactonizing enzyme, C | 92.47 | |
| 3tj4_A | 372 | Mandelate racemase; enolase, dehydratase, enzyme f | 92.4 | |
| 4e8g_A | 391 | Enolase, mandelate racemase/muconate lactonizing e | 92.24 | |
| 3u9i_A | 393 | Mandelate racemase/muconate lactonizing enzyme, C | 92.22 | |
| 2qq6_A | 410 | Mandelate racemase/muconate lactonizing enzyme- li | 92.15 | |
| 1tzz_A | 392 | Hypothetical protein L1841; structural genomics, m | 91.9 | |
| 2hzg_A | 401 | Mandelate racemase/muconate lactonizing enzyme/EN | 91.84 | |
| 3toy_A | 383 | Mandelate racemase/muconate lactonizing enzyme FA | 91.78 | |
| 2gdq_A | 382 | YITF; mandelate racemase/muconate lactonizing enzy | 91.71 | |
| 3my9_A | 377 | Muconate cycloisomerase; structural genomics, PSI- | 91.67 | |
| 2hxt_A | 441 | L-fuconate dehydratase; enolase superfamily, D-ery | 91.62 | |
| 3rr1_A | 405 | GALD, putative D-galactonate dehydratase; enolase, | 91.32 | |
| 4dye_A | 398 | Isomerase; enolase family protein, EFI, enzym func | 91.19 | |
| 3qld_A | 388 | Mandelate racemase/muconate lactonizing protein; s | 91.06 | |
| 3ro6_B | 356 | Putative chloromuconate cycloisomerase; TIM barrel | 90.98 | |
| 1chr_A | 370 | Chloromuconate cycloisomerase; 3.00A {Ralstonia eu | 90.88 | |
| 1kko_A | 413 | 3-methylaspartate ammonia-lyase; enolase superfami | 90.76 | |
| 3stp_A | 412 | Galactonate dehydratase, putative; PSI biology, st | 90.7 | |
| 3fcp_A | 381 | L-Ala-D/L-Glu epimerase, A muconate lactonizing en | 90.69 | |
| 4h1z_A | 412 | Enolase Q92ZS5; dehydratase, magnesium binding sit | 90.38 | |
| 3sjn_A | 374 | Mandelate racemase/muconate lactonizing protein; e | 89.59 | |
| 2chr_A | 370 | Chloromuconate cycloisomerase; 3.00A {Cupriavidus | 89.58 | |
| 2oz8_A | 389 | MLL7089 protein; structural genomics, unknown func | 89.18 | |
| 3va8_A | 445 | Probable dehydratase; enolase, magnesium binding s | 89.0 | |
| 4a35_A | 441 | Mitochondrial enolase superfamily member 1; isomer | 88.74 | |
| 4e5t_A | 404 | Mandelate racemase / muconate lactonizing enzyme, | 88.63 | |
| 1wuf_A | 393 | Hypothetical protein LIN2664; structural genomics, | 88.58 | |
| 3rcy_A | 433 | Mandelate racemase/muconate lactonizing enzyme-LI | 88.51 | |
| 3r4e_A | 418 | Mandelate racemase/muconate lactonizing enzyme; en | 88.37 | |
| 3dgb_A | 382 | Muconate cycloisomerase; muconate lactonizing enzy | 88.36 | |
| 3ddm_A | 392 | Putative mandelate racemase/muconate lactonizing e | 87.84 | |
| 2akz_A | 439 | Gamma enolase, neural; fluoride inhibition, negati | 87.81 | |
| 3vc5_A | 441 | Mandelate racemase/muconate lactonizing protein; d | 87.74 | |
| 2ozt_A | 332 | TLR1174 protein; structural genomics, O-succinylbe | 87.52 | |
| 4e4u_A | 412 | Mandalate racemase/muconate lactonizing enzyme; ma | 87.49 | |
| 3qtp_A | 441 | Enolase 1; glycolysis, lyase; HET: 2PG; 1.90A {Ent | 87.38 | |
| 3vdg_A | 445 | Probable glucarate dehydratase; enolase, magnesium | 87.36 | |
| 3sbf_A | 401 | Mandelate racemase / muconate lactonizing enzyme; | 87.36 | |
| 3t6c_A | 440 | RSPA, putative MAND family dehydratase; enolase, m | 86.91 | |
| 3mkc_A | 394 | Racemase; metabolic process, PSI2, NYSGXRC, struct | 86.82 | |
| 1ydn_A | 295 | Hydroxymethylglutaryl-COA lyase; TIM-barrel protei | 86.58 | |
| 4hnl_A | 421 | Mandelate racemase/muconate lactonizing enzyme; de | 86.48 | |
| 3v3w_A | 424 | Starvation sensing protein RSPA; enolase, enzyme f | 85.85 | |
| 3ugv_A | 390 | Enolase; enzyme function initiative, EFI, lyase; 2 | 85.34 | |
| 3tji_A | 422 | Mandelate racemase/muconate lactonizing enzyme, N | 85.07 | |
| 3mqt_A | 394 | Mandelate racemase/muconate lactonizing protein; P | 84.63 | |
| 2al1_A | 436 | Enolase 1, 2-phospho-D-; beta barrel, lyase; HET: | 84.28 | |
| 3p3b_A | 392 | Mandelate racemase/muconate lactonizing protein; e | 84.25 | |
| 3go2_A | 409 | Putative L-alanine-DL-glutamate epimerase; structu | 84.06 | |
| 2ftp_A | 302 | Hydroxymethylglutaryl-COA lyase; structural genomi | 84.04 | |
| 4g8t_A | 464 | Glucarate dehydratase; enolase, enzyme function IN | 83.76 | |
| 4h2h_A | 376 | Mandelate racemase/muconate lactonizing enzyme; en | 83.67 | |
| 3vcn_A | 425 | Mannonate dehydratase; enolase, magnesium binding | 83.21 | |
| 1wue_A | 386 | Mandelate racemase/muconate lactonizing enzyme FA | 83.0 | |
| 3qy7_A | 262 | Tyrosine-protein phosphatase YWQE; TIM barrel, pol | 82.4 | |
| 4hpn_A | 378 | Putative uncharacterized protein; enolase, enzyme | 81.47 | |
| 3p0w_A | 470 | Mandelate racemase/muconate lactonizing protein; s | 81.34 | |
| 1nvm_A | 345 | HOA, 4-hydroxy-2-oxovalerate aldolase; sequestered | 81.34 | |
| 3mzn_A | 450 | Glucarate dehydratase; lyase, structural genomics, | 80.46 | |
| 4h83_A | 388 | Mandelate racemase/muconate lactonizing enzyme; st | 80.18 |
| >3v0s_A Perakine reductase; AKR superfamily, oxidoreductase; HET: MLZ M3L MLY ATR; 1.77A {Rauvolfia serpentina} PDB: 3v0u_A 3v0t_A* 3uyi_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-56 Score=394.15 Aligned_cols=214 Identities=75% Similarity=1.269 Sum_probs=192.4
Q ss_pred cCceecCCCCccccceeecccccCCCCCCCCCHHHHHHHHHHHHHCCCCEEeCcCCcCC-CcHHHHHHHHHhcCCCCCEE
Q 025500 8 VPRVKLGTQGLEVSKLGYGCMNLSGGYSSPVSEEDGISMIKHAFSKGITFFDTADVYGQ-NANEVLLGKALKQLPREKIQ 86 (252)
Q Consensus 8 m~~~~lg~~g~~vs~lglG~~~~g~~~~~~~~~~~~~~~l~~A~~~Gin~~Dta~~Yg~-g~se~~ig~~l~~~~R~~~~ 86 (252)
|+||+||++|++||+||||||++|+.|+...+.+++.+++++|++.|||+||||+.||+ |.+|+.+|++|+..+|+++|
T Consensus 1 M~~~~lg~tg~~vs~lglGt~~~g~~~~~~~~~~~~~~~l~~Al~~Gi~~~DTA~~Yg~~G~sE~~lG~al~~~~R~~~~ 80 (337)
T 3v0s_A 1 MPRVKLGTQGLEVSKLGFGCMGLSGDYNDALPEEQGIAVIKEAFNCGITFFDTSDIYGENGSNEELLGKALKQLPREXIQ 80 (337)
T ss_dssp CCEEECSSSSCEEESSCEECGGGC-------CHHHHHHHHHHHHHTTCCEEECCTTSSSTTHHHHHHHHHHTTSCGGGCE
T ss_pred CCeeecCCCCceecCeeecccccCCCCCCCCCHHHHHHHHHHHHHcCCCEEEChhhhCCCCcHHHHHHHHHhhcCCcceE
Confidence 78999999999999999999999877776568899999999999999999999999997 68999999999976899999
Q ss_pred EEeccCccCCCCcccccCCChHHHHHHHHHHHHHcCCCcccEEEccCCCCCCCHHHHHHHHHHHHHcCCccEEEccCCCH
Q 025500 87 VATKFGIAGIGVAGVIVKGAPDYVRSCCEASLKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASP 166 (252)
Q Consensus 87 i~tK~~~~~~~~~~~~~~~~~~~i~~~~~~sL~~Lg~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~G~ir~iGvs~~~~ 166 (252)
|+||++......+....+.+++.+++++++||+|||+||||+|++|||+...+.+++|++|++|+++|+||+||||||+.
T Consensus 81 i~TK~~~~~~~~~~~~~~~~~~~i~~~~~~SL~rLg~dyiDl~~lH~p~~~~~~~e~~~al~~l~~~Gkir~iGvSn~~~ 160 (337)
T 3v0s_A 81 VGTKFGIHEIGFSGVKAXGTPDYVRSCCEASLKRLDVDYIDLFYIHRIDTTVPIEITMGELXXLVEEGKIXYVGLSEASP 160 (337)
T ss_dssp EEEEECEEEEETTEEEECCCHHHHHHHHHHHHHHHTCSCEEEEEESSCCTTSCHHHHHHHHHHHHHTTSEEEEEEESCCH
T ss_pred EEeeeccccCCCCcccCCCCHHHHHHHHHHHHHHhCCCCeeEEEecCCCCCCCHHHHHHHHHHHHHCCCeeEEeccCCCH
Confidence 99999875422122334678999999999999999999999999999999889999999999999999999999999999
Q ss_pred HHHHHHhhcCCceEEeeecCccccchhhhHHHHHHHhCCeEEecccCccccCCCC
Q 025500 167 GTIRRAHAVHPITAVQMEWSLWTRDIEEEIIPLCRELGIGIVPYSPLGRGFFGGK 221 (252)
Q Consensus 167 ~~l~~~~~~~~~~~~q~~~~~~~~~~~~~l~~~~~~~gi~v~a~spl~~G~L~~~ 221 (252)
++++++.+..+++++|++||++++..+.+++++|+++||+|++|+||++|+|+++
T Consensus 161 ~~l~~~~~~~~~~~~Q~~~~~~~~~~e~~l~~~~~~~gi~v~a~spL~~G~L~g~ 215 (337)
T 3v0s_A 161 DTIRRAHAVHPVTALQIEYSLWTRDIEDEIVPLCRQLGIGIVPYSPIGRGLFWGK 215 (337)
T ss_dssp HHHHHHHHHSCCCEEEEECBTTBCGGGTTHHHHHHHHTCEEEEESTTHHHHHHHH
T ss_pred HHHHHHhccCCceEEEeeccccccchhHHHHHHHHHcCceEEEeccccCcccCCC
Confidence 9999999989999999999999998778899999999999999999999999875
|
| >1pyf_A IOLS protein; beta-alpha barrel, aldo-keto reductase, TIM barrel, oxidoreductase; 1.80A {Bacillus subtilis} SCOP: c.1.7.1 PDB: 1pz0_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-55 Score=383.90 Aligned_cols=214 Identities=32% Similarity=0.608 Sum_probs=193.2
Q ss_pred cCceecCCCCccccceeecccccCCC--CCCCCCHHHHHHHHHHHHHCCCCEEeCcCCcCCCcHHHHHHHHHhcCCCCCE
Q 025500 8 VPRVKLGTQGLEVSKLGYGCMNLSGG--YSSPVSEEDGISMIKHAFSKGITFFDTADVYGQNANEVLLGKALKQLPREKI 85 (252)
Q Consensus 8 m~~~~lg~~g~~vs~lglG~~~~g~~--~~~~~~~~~~~~~l~~A~~~Gin~~Dta~~Yg~g~se~~ig~~l~~~~R~~~ 85 (252)
|++++||+||+.||+||||||++|+. |+. .+++++.++++.|++.|||+||||+.||+|.+|+.+|++|+..+|+++
T Consensus 1 M~~~~lg~tg~~vs~lglGt~~~g~~~~~~~-~~~~~~~~~l~~Al~~Gi~~~DTA~~Yg~G~sE~~lG~al~~~~R~~~ 79 (312)
T 1pyf_A 1 MKKAKLGKSDLQVFPIGLGTNAVGGHNLYPN-LNEETGKELVREAIRNGVTMLDTAYIYGIGRSEELIGEVLREFNREDV 79 (312)
T ss_dssp -CCEECTTSCCEECSBCEECTTSSCTTTCSS-CCHHHHHHHHHHHHHTTCCEEECCTTTTTTHHHHHHHHHHTTSCGGGC
T ss_pred CCeeecCCCCCcccCEeEeccccCCCCCCCC-CCHHHHHHHHHHHHHcCCCEEECccccCCCchHHHHHHHhhhcCCCeE
Confidence 78999999999999999999999864 442 478999999999999999999999999999999999999996589999
Q ss_pred EEEeccCccCCCCcccccCCChHHHHHHHHHHHHHcCCCcccEEEccCCCCCCCHHHHHHHHHHHHHcCCccEEEccCCC
Q 025500 86 QVATKFGIAGIGVAGVIVKGAPDYVRSCCEASLKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEAS 165 (252)
Q Consensus 86 ~i~tK~~~~~~~~~~~~~~~~~~~i~~~~~~sL~~Lg~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~G~ir~iGvs~~~ 165 (252)
+|+||++.... .+....+.+++.+++++++||+|||+||||+|++|||+...+.+++|++|++|+++|+||+||||||+
T Consensus 80 ~i~TK~g~~~~-~~~~~~~~~~~~i~~~~~~SL~rL~~dyiDl~~lH~p~~~~~~~e~~~al~~l~~~Gkir~iGvSn~~ 158 (312)
T 1pyf_A 80 VIATKAAHRKQ-GNDFVFDNSPDFLKKSVDESLKRLNTDYIDLFYIHFPDEHTPKDEAVNALNEMKKAGKIRSIGVSNFS 158 (312)
T ss_dssp EEEEEECEEEE-TTEEEECCCHHHHHHHHHHHHHHHTSSCBSEEEECSCCSSSCHHHHHHHHHHHHHTTSBSCEEEESCC
T ss_pred EEEEEeCCCCC-CCCCCCCCCHHHHHHHHHHHHHHhCCCcEEEEEeCCCCCCCCHHHHHHHHHHHHHCCCcCEEEecCCC
Confidence 99999863210 11112457899999999999999999999999999999888899999999999999999999999999
Q ss_pred HHHHHHHhhcCCceEEeeecCccccchhhhHHHHHHHhCCeEEecccCccccCCCCCC
Q 025500 166 PGTIRRAHAVHPITAVQMEWSLWTRDIEEEIIPLCRELGIGIVPYSPLGRGFFGGKAV 223 (252)
Q Consensus 166 ~~~l~~~~~~~~~~~~q~~~~~~~~~~~~~l~~~~~~~gi~v~a~spl~~G~L~~~~~ 223 (252)
.++++++++..+|+++|++||++++..+.+++++|+++||+|++|+||++|+|++++.
T Consensus 159 ~~~l~~~~~~~~~~~~Q~~~~~~~~~~e~~l~~~~~~~gi~v~a~spL~~G~L~~~~~ 216 (312)
T 1pyf_A 159 LEQLKEANKDGLVDVLQGEYNLLNREAEKTFFPYTKEHNISFIPYFPLVSGLLAGKYT 216 (312)
T ss_dssp HHHHHHHTTTSCCCEEEEECBTTBCGGGTTHHHHHHHHTCEEEEESTTTTTGGGTCCC
T ss_pred HHHHHHHHhhCCceEEeccCCccccchHHHHHHHHHHcCCeEEEecccccccccCCCC
Confidence 9999999998899999999999999876789999999999999999999999999853
|
| >3n2t_A Putative oxidoreductase; aldo/keto reductase superfamily, AKR, AKR11B4, TIM barrel; 2.00A {Gluconobacter oxydans} SCOP: c.1.7.0 | Back alignment and structure |
|---|
Probab=100.00 E-value=7e-55 Score=386.06 Aligned_cols=217 Identities=30% Similarity=0.522 Sum_probs=198.1
Q ss_pred ccccCceecCCCCccccceeecccccCCC-CCCCCCHHHHHHHHHHHHHCCCCEEeCcCCcCCCcHHHHHHHHHhcCCCC
Q 025500 5 KHQVPRVKLGTQGLEVSKLGYGCMNLSGG-YSSPVSEEDGISMIKHAFSKGITFFDTADVYGQNANEVLLGKALKQLPRE 83 (252)
Q Consensus 5 ~~~m~~~~lg~~g~~vs~lglG~~~~g~~-~~~~~~~~~~~~~l~~A~~~Gin~~Dta~~Yg~g~se~~ig~~l~~~~R~ 83 (252)
.|+|+||+||++|++||+||||||++|+. |+. .+.+++.++++.|+++|||+||||+.||+|.+|+.+|++|+. +|+
T Consensus 16 ~m~M~~~~lg~tg~~vs~lglGt~~~g~~~~g~-~~~~~~~~~l~~Al~~Gi~~~DTA~~Yg~G~sE~~lG~al~~-~R~ 93 (348)
T 3n2t_A 16 HMASDTIRIPGIDTPLSRVALGTWAIGGWMWGG-PDDDNGVRTIHAALDEGINLIDTAPVYGFGHSEEIVGRALAE-KPN 93 (348)
T ss_dssp -CTTSEECCTTCSSCEESEEEECTTSSCSSSCS-TTHHHHHHHHHHHHHTTCCEEECCTTGGGGHHHHHHHHHHHH-SCC
T ss_pred CCCceeeecCCCCCccCCEeEeCccccCCCCCC-CCHHHHHHHHHHHHHcCCCEEEChhhcCCChHHHHHHHHHhh-CCC
Confidence 36799999999999999999999999863 554 488999999999999999999999999999999999999996 999
Q ss_pred CEEEEeccCccCC-CCc---ccccCCChHHHHHHHHHHHHHcCCCcccEEEccCCCCCCCHHHHHHHHHHHHHcCCccEE
Q 025500 84 KIQVATKFGIAGI-GVA---GVIVKGAPDYVRSCCEASLKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYI 159 (252)
Q Consensus 84 ~~~i~tK~~~~~~-~~~---~~~~~~~~~~i~~~~~~sL~~Lg~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~G~ir~i 159 (252)
++||+||++..+. ..+ ....+.+++.+++++++||+|||+||||+|++|||+...+.+++|++|++|+++|+||+|
T Consensus 94 ~v~I~TK~g~~~~~~~~~~~~~~~~~~~~~i~~~~e~SL~rLg~dyiDl~~lH~p~~~~~~~e~~~al~~l~~~Gkir~i 173 (348)
T 3n2t_A 94 KAHVATKLGLHWVGEDEKNMKVFRDSRPARIRKEVEDSLRRLRVETIDLEQIHWPDDKTPIDESARELQKLHQDGKIRAL 173 (348)
T ss_dssp CCEEEEEECEEEESSSTTTCEEEECCCHHHHHHHHHHHHHHHTCSSEEEEEESSCCTTSCHHHHHHHHHHHHHTTSEEEE
T ss_pred eEEEEEeecCCCcCCCcccccccCCCCHHHHHHHHHHHHHHhCCCcEEEEEecCCCCCCCHHHHHHHHHHHHHhCcceEE
Confidence 9999999975431 111 123457899999999999999999999999999999988999999999999999999999
Q ss_pred EccCCCHHHHHHHhhcCCceEEeeecCccccchhhhHHHHHHHhCCeEEecccCccccCCCCCC
Q 025500 160 GLSEASPGTIRRAHAVHPITAVQMEWSLWTRDIEEEIIPLCRELGIGIVPYSPLGRGFFGGKAV 223 (252)
Q Consensus 160 Gvs~~~~~~l~~~~~~~~~~~~q~~~~~~~~~~~~~l~~~~~~~gi~v~a~spl~~G~L~~~~~ 223 (252)
|||||+.++++++++..+++++|++||++++..+.+++++|+++||+|++|+||++|+|++++.
T Consensus 174 GvSn~~~~~l~~~~~~~~~~~~Q~~~nl~~~~~e~~l~~~~~~~gi~v~a~spL~~G~Ltg~~~ 237 (348)
T 3n2t_A 174 GVSNFSPEQMDIFREVAPLATIQPPLNLFERTIEKDILPYAEKHNAVVLAYGALCRGLLTGKMN 237 (348)
T ss_dssp EEESCCHHHHHHHHHHSCCCEEECBCBTTBCGGGGTHHHHHHHHTCEEEEBCTTGGGGGGTCCC
T ss_pred ecCCCCHHHHHHHHHhCCccEEEeeecCccCchHHHHHHHHHHcCCeEEEeecccCccccCCcc
Confidence 9999999999999998999999999999999877899999999999999999999999999854
|
| >3n6q_A YGHZ aldo-keto reductase; TIM barrel, oxidoreductase; 1.80A {Escherichia coli} SCOP: c.1.7.0 PDB: 4ast_A 4aub_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.4e-54 Score=378.98 Aligned_cols=219 Identities=28% Similarity=0.522 Sum_probs=192.4
Q ss_pred CCcccc--ccCceecCCCCccccceeecccccCCCCCCCCCHHHHHHHHHHHHHCCCCEEeCcCCcCC--CcHHHHHHHH
Q 025500 1 MAEEKH--QVPRVKLGTQGLEVSKLGYGCMNLSGGYSSPVSEEDGISMIKHAFSKGITFFDTADVYGQ--NANEVLLGKA 76 (252)
Q Consensus 1 m~~~~~--~m~~~~lg~~g~~vs~lglG~~~~g~~~~~~~~~~~~~~~l~~A~~~Gin~~Dta~~Yg~--g~se~~ig~~ 76 (252)
||+.++ .|+||+||+||++||+||||||+. +|...+.+++.++++.|++.|||+||||+.||+ |.+|+.+|++
T Consensus 4 ~~~~~~~~~M~~r~lg~tg~~vs~lglGt~~~---~g~~~~~~~~~~~l~~Al~~Gi~~~DTA~~Yg~~~G~sE~~lG~a 80 (346)
T 3n6q_A 4 LANPERYGQMQYRYCGKSGLRLPALSLGLWHN---FGHVNALESQRAILRKAFDLGITHFDLANNYGPPPGSAEENFGRL 80 (346)
T ss_dssp CCCTTTTSSCCEEECTTSSCEEESEEEECSSS---CSTTSCHHHHHHHHHHHHHTTCCEEECCTTCTTTTTHHHHHHHHH
T ss_pred ccCCCcccCceeEecCCCCCeecCeeecCccc---cCCCCCHHHHHHHHHHHHHcCCCEEECccccCCCCCcHHHHHHHH
Confidence 555554 499999999999999999999864 333457899999999999999999999999998 8999999999
Q ss_pred Hhc--CC-CCCEEEEeccCccCCCCcccccCCChHHHHHHHHHHHHHcCCCcccEEEccCCCCCCCHHHHHHHHHHHHHc
Q 025500 77 LKQ--LP-REKIQVATKFGIAGIGVAGVIVKGAPDYVRSCCEASLKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEE 153 (252)
Q Consensus 77 l~~--~~-R~~~~i~tK~~~~~~~~~~~~~~~~~~~i~~~~~~sL~~Lg~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~ 153 (252)
|+. .+ |+++||+||++...+.. ......+++.+++++++||+|||+||||+|++|||+...+++++|++|++|+++
T Consensus 81 l~~~~~~~R~~~~I~TK~g~~~~~~-~~~~~~s~~~i~~~~e~SL~rL~~dyiDl~~lH~p~~~~~~~e~~~al~~l~~~ 159 (346)
T 3n6q_A 81 LREDFAAYRDELIISTKAGYDMWPG-PYGSGGSRKYLLASLDQSLKRMGLEYVDIFYSHRVDENTPMEETASALAHAVQS 159 (346)
T ss_dssp HHHHCTTTGGGCEEEEEECSCCSSS-TTSSSSCHHHHHHHHHHHHHHHTCSCEEEEEECSCCTTSCHHHHHHHHHHHHHT
T ss_pred HHhhcccccccEEEEEEecccCCCC-CCCCCCCHHHHHHHHHHHHHHhCCCcEeEEEEeCCCCCCCHHHHHHHHHHHHHc
Confidence 996 34 99999999987543211 111234899999999999999999999999999999888999999999999999
Q ss_pred CCccEEEccCCCHHHHHHHhhc-----CCceEEeeecCccccchhh-hHHHHHHHhCCeEEecccCccccCCCCCC
Q 025500 154 GKIKYIGLSEASPGTIRRAHAV-----HPITAVQMEWSLWTRDIEE-EIIPLCRELGIGIVPYSPLGRGFFGGKAV 223 (252)
Q Consensus 154 G~ir~iGvs~~~~~~l~~~~~~-----~~~~~~q~~~~~~~~~~~~-~l~~~~~~~gi~v~a~spl~~G~L~~~~~ 223 (252)
|+||+||||||+.++++++.+. .++.++|++||++++..+. +++++|+++||+|++|+||++|+|++++.
T Consensus 160 Gkir~iGvSn~~~~~l~~~~~~~~~~~~~~~~~Q~~~~l~~~~~~~~~l~~~~~~~gi~v~a~spL~~G~L~g~~~ 235 (346)
T 3n6q_A 160 GKALYVGISSYSPERTQKMVELLREWKIPLLIHQPSYNLLNRWVDKSGLLDTLQNNGVGCIAFTPLAQGLLTGKYL 235 (346)
T ss_dssp TSEEEEEEESCCHHHHHHHHHHHHTTTCCCCEEECBCBTTBCHHHHTTHHHHHHHHTCEEEEBSTTGGGGGGTSCC
T ss_pred CCeeEEEeCCCCHHHHHHHHHHHHHcCCCeEEEeccCchhhcCcchhhHHHHHHHcCCeEEEeccccCeecCCCcc
Confidence 9999999999999999987653 5789999999999997665 89999999999999999999999998854
|
| >1ynp_A Oxidoreductase, AKR11C1; aldo-keto reductase, NADPH; HET: SUC; 1.25A {Bacillus halodurans} PDB: 1ynq_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-54 Score=378.06 Aligned_cols=209 Identities=36% Similarity=0.602 Sum_probs=184.5
Q ss_pred ccccCceecCCCCccccceeecccccCCCCCCCCCHHHHHHHHHHHHHCCCCEEeCcCCcCCCcHHHHHHHHHhcCCCCC
Q 025500 5 KHQVPRVKLGTQGLEVSKLGYGCMNLSGGYSSPVSEEDGISMIKHAFSKGITFFDTADVYGQNANEVLLGKALKQLPREK 84 (252)
Q Consensus 5 ~~~m~~~~lg~~g~~vs~lglG~~~~g~~~~~~~~~~~~~~~l~~A~~~Gin~~Dta~~Yg~g~se~~ig~~l~~~~R~~ 84 (252)
..+|++|+||++|++||+||||||++|. +.+++.++++.|++.|||+||||+.||+|.+|+.+|++|+. +|++
T Consensus 18 ~~~M~~r~lg~tg~~vs~lglGt~~~g~------~~~~~~~~l~~Al~~Gi~~~DTA~~Yg~G~sE~~lG~al~~-~R~~ 90 (317)
T 1ynp_A 18 GSHMKKRQLGTSDLHVSELGFGCMSLGT------DETKARRIMDEVLELGINYLDTADLYNQGLNEQFVGKALKG-RRQD 90 (317)
T ss_dssp --CCCEEECTTSSCEEESBCBCSCCCCS------CHHHHHHHHHHHHHTTCCEEECSCBTTBCCCHHHHHHHHTT-CGGG
T ss_pred cCCcceeecCCCCCcccCEeEcCcccCC------CHHHHHHHHHHHHHcCCCeEECccccCCCchHHHHHHHHhc-CCCe
Confidence 3569999999999999999999999875 56899999999999999999999999999999999999995 8999
Q ss_pred EEEEeccCccCCCCc-ccccCCChHHHHHHHHHHHHHcCCCcccEEEccCCCCCCCHHHHHHHHHHHHHcCCccEEEccC
Q 025500 85 IQVATKFGIAGIGVA-GVIVKGAPDYVRSCCEASLKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSE 163 (252)
Q Consensus 85 ~~i~tK~~~~~~~~~-~~~~~~~~~~i~~~~~~sL~~Lg~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~G~ir~iGvs~ 163 (252)
+||+||++....... .+..+.+++.+++++++||+|||+||||+|++|||+...+.+++|++|++|+++|+||+|||||
T Consensus 91 v~I~TK~~~~~~~~~~~~~~~~~~~~v~~~~e~SL~rL~~dyiDl~llH~p~~~~~~~e~~~al~~l~~~Gkir~iGvSn 170 (317)
T 1ynp_A 91 IILATKVGNRFEQGKEGWWWDPSKAYIKEAVKDSLRRLQTDYIDLYQLHGGTIDDPIDETIEAFEELKQEGVIRYYGISS 170 (317)
T ss_dssp CEEEEEC---------------CHHHHHHHHHHHHHHHTCSCEEEEEECSCCTTSCHHHHHHHHHHHHHHTSEEEEEEEC
T ss_pred EEEEeeeCCCcCCCCccccCCCCHHHHHHHHHHHHHHHCCCcEeEEEecCCCCCCChHHHHHHHHHHHhCCceEEEEecC
Confidence 999999986432110 1123578999999999999999999999999999998888899999999999999999999999
Q ss_pred CCHHHHHHHhhcCCceEEeeecCccccchhhhHHHHHHHhCCeEEecccCccccCCCC
Q 025500 164 ASPGTIRRAHAVHPITAVQMEWSLWTRDIEEEIIPLCRELGIGIVPYSPLGRGFFGGK 221 (252)
Q Consensus 164 ~~~~~l~~~~~~~~~~~~q~~~~~~~~~~~~~l~~~~~~~gi~v~a~spl~~G~L~~~ 221 (252)
|+.++++++++..+++++|++||++++..+. ++++|+++||+|++|+||++|.|+++
T Consensus 171 ~~~~~l~~~~~~~~~~~~Q~~~nl~~~~~e~-l~~~~~~~gI~v~a~spL~~G~L~~~ 227 (317)
T 1ynp_A 171 IRPNVIKEYLKRSNIVSIMMQYSILDRRPEE-WFPLIQEHGVSVVVRGPVARGLLSRR 227 (317)
T ss_dssp CCHHHHHHHHHHSCCCEEEEECBTTBCGGGG-GHHHHHHTTCEEEEECTTGGGTTSSS
T ss_pred CCHHHHHHHHhcCCCEEEeccCCchhCCHHH-HHHHHHHcCCeEEEecCccCcccCCC
Confidence 9999999999888899999999999987644 99999999999999999999999986
|
| >3erp_A Putative oxidoreductase; funded by the national institute of allergy and infectious D of NIH contract number HHSN272200700058C; 1.55A {Salmonella enterica subsp} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-53 Score=377.17 Aligned_cols=212 Identities=28% Similarity=0.540 Sum_probs=190.0
Q ss_pred ccCceecCCCCccccceeeccc-ccCCCCCCCCCHHHHHHHHHHHHHCCCCEEeCcCCcCC--CcHHHHHHHHHhc-C--
Q 025500 7 QVPRVKLGTQGLEVSKLGYGCM-NLSGGYSSPVSEEDGISMIKHAFSKGITFFDTADVYGQ--NANEVLLGKALKQ-L-- 80 (252)
Q Consensus 7 ~m~~~~lg~~g~~vs~lglG~~-~~g~~~~~~~~~~~~~~~l~~A~~~Gin~~Dta~~Yg~--g~se~~ig~~l~~-~-- 80 (252)
.|+||+||+||++||+|||||| .+| ...+.+++.++|+.|++.|||+||||+.||+ |.+|+.+|++|++ .
T Consensus 33 ~M~~r~lg~tg~~vs~lglGt~~~~g----~~~~~~~~~~~l~~Al~~Gi~~~DTA~~Yg~~~G~sE~~lG~al~~~~~~ 108 (353)
T 3erp_A 33 TMEYRRCGRSGVKLPAISLGLWHNFG----DTTRVENSRALLQRAFDLGITHFDLANNYGPPPGSAECNFGRILQEDFLP 108 (353)
T ss_dssp SCCEEECSSSSCEEESEEEECSSSCS----TTSCHHHHHHHHHHHHHTTCCEEECCTTCTTTTTHHHHHHHHHHHHHTGG
T ss_pred cceeeecCCCCCccCCeeecChhhcC----CCCCHHHHHHHHHHHHHcCCCEEEChhhhCCCCChHHHHHHHHHHhhccC
Confidence 4999999999999999999999 444 3357899999999999999999999999998 9999999999985 3
Q ss_pred CCCCEEEEeccCccCCCCcccccCCChHHHHHHHHHHHHHcCCCcccEEEccCCCCCCCHHHHHHHHHHHHHcCCccEEE
Q 025500 81 PREKIQVATKFGIAGIGVAGVIVKGAPDYVRSCCEASLKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIG 160 (252)
Q Consensus 81 ~R~~~~i~tK~~~~~~~~~~~~~~~~~~~i~~~~~~sL~~Lg~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~G~ir~iG 160 (252)
.|+++||+||++...+. .......+++.+++++++||+|||+||||+|++|||+...+++++|++|++|+++|+||+||
T Consensus 109 ~R~~v~I~TK~g~~~~~-~~~~~~~s~~~i~~~~e~SL~rLg~dyiDl~~lH~p~~~~~~~e~~~aL~~l~~~Gkir~iG 187 (353)
T 3erp_A 109 WRDELIISTKAGYTMWD-GPYGDWGSRKYLIASLDQSLKRMGLEYVDIFYHHRPDPETPLKETMKALDHLVRHGKALYVG 187 (353)
T ss_dssp GGGGCEEEEEESSCCSS-STTSSTTCHHHHHHHHHHHHHHHTCSCEEEEEECSCCTTSCHHHHHHHHHHHHHTTSEEEEE
T ss_pred CCCeEEEEeeeccCCCC-CcccCCCCHHHHHHHHHHHHHHhCCCeEeEEEecCCCCCCCHHHHHHHHHHHHHCCCccEEE
Confidence 39999999999764321 11122348999999999999999999999999999999889999999999999999999999
Q ss_pred ccCCCHHHHHHHhhc-----CCceEEeeecCccccchhhhHHHHHHHhCCeEEecccCccccCCCCCC
Q 025500 161 LSEASPGTIRRAHAV-----HPITAVQMEWSLWTRDIEEEIIPLCRELGIGIVPYSPLGRGFFGGKAV 223 (252)
Q Consensus 161 vs~~~~~~l~~~~~~-----~~~~~~q~~~~~~~~~~~~~l~~~~~~~gi~v~a~spl~~G~L~~~~~ 223 (252)
||||++++++++.+. .+++++|++||++++..+.+++++|+++||+|++|+||++|+|++++.
T Consensus 188 vSn~~~~~l~~~~~~~~~~~~~~~~~Q~~~~~~~~~~e~~ll~~~~~~gI~v~a~spL~~G~Ltg~~~ 255 (353)
T 3erp_A 188 ISNYPADLARQAIDILEDLGTPCLIHQPKYSLFERWVEDGLLALLQEKGVGSIAFSPLAGGQLTDRYL 255 (353)
T ss_dssp EESCCHHHHHHHHHHHHHHTCCEEEEECBCBTTBCGGGGTHHHHHHHHTCEEEEBSTTGGGTSSGGGT
T ss_pred ecCCCHHHHHHHHHHHHHcCCCeEEeeccccccccchhhHHHHHHHHcCCeEEEeccccccccCCCcc
Confidence 999999999988764 589999999999999877889999999999999999999999998754
|
| >1pz1_A GSP69, general stress protein 69; beta-alpha barrel, aldo-keto reductase, TIM barrel, oxidoreductase; HET: NAP; 2.20A {Bacillus subtilis} SCOP: c.1.7.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=3e-53 Score=373.56 Aligned_cols=214 Identities=34% Similarity=0.571 Sum_probs=194.2
Q ss_pred cCceecCCCCccccceeecccccCCC-CCCCCCHHHHHHHHHHHHHCCCCEEeCcCCcCCCcHHHHHHHHHhc-CCCCCE
Q 025500 8 VPRVKLGTQGLEVSKLGYGCMNLSGG-YSSPVSEEDGISMIKHAFSKGITFFDTADVYGQNANEVLLGKALKQ-LPREKI 85 (252)
Q Consensus 8 m~~~~lg~~g~~vs~lglG~~~~g~~-~~~~~~~~~~~~~l~~A~~~Gin~~Dta~~Yg~g~se~~ig~~l~~-~~R~~~ 85 (252)
|++|+||+||++||+||||||++|+. |+. .+.+++.++++.|+++|||+||||+.||+|.+|+.+|++|+. .+|+++
T Consensus 1 M~~~~lg~tg~~vs~lglGt~~~g~~~~g~-~~~~~~~~~l~~Al~~Gi~~~DTA~~Yg~G~sE~~lG~al~~~~~R~~~ 79 (333)
T 1pz1_A 1 MEYTSIADTGIEASRIGLGTWAIGGTMWGG-TDEKTSIETIRAALDQGITLIDTAPAYGFGQSEEIVGKAIKEYMKRDQV 79 (333)
T ss_dssp CCEEECTTSSCEEESEEEECTGGGCTTTTC-CCHHHHHHHHHHHHHTTCCEEECCTTGGGGHHHHHHHHHHHHHTCGGGC
T ss_pred CCceecCCCCCcccCEeEechhhcCCcCCC-CCHHHHHHHHHHHHHcCCCeEECccccCCCchHHHHHHHHhcCCCcCeE
Confidence 78999999999999999999999864 653 488999999999999999999999999999999999999986 379999
Q ss_pred EEEeccCccCCCCcccccCCChHHHHHHHHHHHHHcCCCcccEEEccCCCCCCCHHHHHHHHHHHHHcCCccEEEccCCC
Q 025500 86 QVATKFGIAGIGVAGVIVKGAPDYVRSCCEASLKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEAS 165 (252)
Q Consensus 86 ~i~tK~~~~~~~~~~~~~~~~~~~i~~~~~~sL~~Lg~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~G~ir~iGvs~~~ 165 (252)
+|+||++..+.. +....+.+++.+++++++||+|||+||||+|++|||+...+.+++|++|++|+++|+||+||||||+
T Consensus 80 ~i~TK~~~~~~~-~~~~~~~~~~~i~~~~~~SL~rLg~dyiDl~~lH~p~~~~~~~e~~~al~~l~~~Gkir~iGvSn~~ 158 (333)
T 1pz1_A 80 ILATKTALDWKN-NQLFRHANRARIVEEVENSLKRLQTDYIDLYQVHWPDPLVPIEETAEVMKELYDAGKIRAIGVSNFS 158 (333)
T ss_dssp EEEEEECEEESS-SCEEECCCHHHHHHHHHHHHHHTTSSCBSEEEECSCCTTSCHHHHHHHHHHHHHTTSBSCEEECSCC
T ss_pred EEEEeeCccCCC-CCCCCCCCHHHHHHHHHHHHHHhCCCceeEEEecCCCCCCCHHHHHHHHHHHHHCCcCCEEEecCCC
Confidence 999999732110 1111246899999999999999999999999999999888899999999999999999999999999
Q ss_pred HHHHHHHhhcCCceEEeeecCccccchhhhHHHHHHHhCCeEEecccCccccCCCCCC
Q 025500 166 PGTIRRAHAVHPITAVQMEWSLWTRDIEEEIIPLCRELGIGIVPYSPLGRGFFGGKAV 223 (252)
Q Consensus 166 ~~~l~~~~~~~~~~~~q~~~~~~~~~~~~~l~~~~~~~gi~v~a~spl~~G~L~~~~~ 223 (252)
.++++++++..+|+++|++||++++..+.+++++|+++||+|++|+||++|+|++++.
T Consensus 159 ~~~l~~~~~~~~~~~~Q~~~nl~~~~~e~~l~~~~~~~gi~v~a~spL~~G~Ltg~~~ 216 (333)
T 1pz1_A 159 IEQMDTFRAVAPLHTIQPPYNLFEREMEESVLPYAKDNKITTLLYGSLCRGLLTGKMT 216 (333)
T ss_dssp HHHHHHHHTTSCCCEECCBCBTTBCGGGGTHHHHHHHTTCEEEEBCTTGGGTTSSCCC
T ss_pred HHHHHHHHhcCCcEEEeccccCccCchHHHHHHHHHHcCceEEEeecccCCccCCCcc
Confidence 9999999998999999999999999877899999999999999999999999999853
|
| >3eau_A Voltage-gated potassium channel subunit beta-2; kvbeta, cortisone, NADPH, cytoplasm, ION transport, ionic channel, NADP, phosphoprotein; HET: NDP PDN; 1.82A {Rattus norvegicus} SCOP: c.1.7.1 PDB: 2r9r_A* 2a79_A* 3lnm_A* 1exb_A* 3eb4_A* 3eb3_A* 1qrq_A* 1zsx_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.1e-53 Score=372.67 Aligned_cols=214 Identities=30% Similarity=0.481 Sum_probs=191.8
Q ss_pred cccCceecCCCCccccceeecccccCCCCCCCCCHHHHHHHHHHHHHCCCCEEeCcCCcCCCcHHHHHHHHHhc--CCCC
Q 025500 6 HQVPRVKLGTQGLEVSKLGYGCMNLSGGYSSPVSEEDGISMIKHAFSKGITFFDTADVYGQNANEVLLGKALKQ--LPRE 83 (252)
Q Consensus 6 ~~m~~~~lg~~g~~vs~lglG~~~~g~~~~~~~~~~~~~~~l~~A~~~Gin~~Dta~~Yg~g~se~~ig~~l~~--~~R~ 83 (252)
|.|.||+||+||++||+||||||.. +|...+.+++.+++++|+++|||+||||+.||+|.+|+.+|++|+. .+|+
T Consensus 1 ~~m~yr~lG~tg~~vs~iglGt~~~---~g~~~~~~~~~~~l~~Al~~Gi~~~DTA~~Yg~G~sE~~lG~al~~~~~~R~ 77 (327)
T 3eau_A 1 MLQFYRNLGKSGLRVSCLGLGTWVT---FGGQITDEMAEHLMTLAYDNGINLFDTAEVYAAGKAEVVLGNIIKKKGWRRS 77 (327)
T ss_dssp CCCSEEESTTSSCEEESEEEECTTC---CCCCSCHHHHHHHHHHHHHTTCCEEEEETTGGGGHHHHHHHHHHHHHTCCGG
T ss_pred CcchhcccCCCCCcccceeecCccc---cCCCCCHHHHHHHHHHHHHcCCCEEECccccCCCChHHHHHHHHHhcCCccC
Confidence 6799999999999999999999843 3334588999999999999999999999999999999999999997 5899
Q ss_pred CEEEEeccCccCCCCcccccCCChHHHHHHHHHHHHHcCCCcccEEEccCCCCCCCHHHHHHHHHHHHHcCCccEEEccC
Q 025500 84 KIQVATKFGIAGIGVAGVIVKGAPDYVRSCCEASLKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSE 163 (252)
Q Consensus 84 ~~~i~tK~~~~~~~~~~~~~~~~~~~i~~~~~~sL~~Lg~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~G~ir~iGvs~ 163 (252)
++||+||+++... .....+.+++.+++++++||+|||+||||+|++|||+...+.+++|++|++|+++|+||+|||||
T Consensus 78 ~v~I~TK~~~~~~--~~~~~~~s~~~i~~~~e~SL~rLg~dyiDl~~lH~p~~~~~~~e~~~al~~l~~~Gkir~iGvSn 155 (327)
T 3eau_A 78 SLVITTKIFWGGK--AETERGLSRKHIIEGLKASLERLQLEYVDVVFANRPDPNTPMEETVRAMTHVINQGMAMYWGTSR 155 (327)
T ss_dssp GCEEEEEESBCCS--SGGGBSSSHHHHHHHHHHHHHHHTCSCEEEEEESSCCTTSCHHHHHHHHHHHHHTTSEEEEEEES
T ss_pred eEEEEEeecCCCC--CCCCCCCCHHHHHHHHHHHHHHhCCCccceEEEeCCCCCCCHHHHHHHHHHHHHcCCeeEEeecC
Confidence 9999999964321 12234578999999999999999999999999999999889999999999999999999999999
Q ss_pred CCHHHHHHHhhc------CCceEEeeecCccccch-hhhHHHHHHHhCCeEEecccCccccCCCCCCC
Q 025500 164 ASPGTIRRAHAV------HPITAVQMEWSLWTRDI-EEEIIPLCRELGIGIVPYSPLGRGFFGGKAVV 224 (252)
Q Consensus 164 ~~~~~l~~~~~~------~~~~~~q~~~~~~~~~~-~~~l~~~~~~~gi~v~a~spl~~G~L~~~~~~ 224 (252)
|+.++++++... .+++++|++||++++.. +.+++++|+++||++++|+||++|+|++++..
T Consensus 156 ~~~~~l~~~~~~~~~~~~~~~~~~Q~~~~~~~~~~~~~~l~~~~~~~gi~v~a~spL~~G~Ltg~~~~ 223 (327)
T 3eau_A 156 WSSMEIMEAYSVARQFNLIPPICEQAEYHMFQREKVEVQLPELFHKIGVGAMTWSPLACGIVSGKYDS 223 (327)
T ss_dssp CCHHHHHHHHHHHHHTTCCCCCEEEEECBTTBCHHHHHHHHHHHHHHCCEEEEECTTGGGGGGTTTTT
T ss_pred CCHHHHHHHHHHHHHcCCCCceeecccccccccchhHhhHHHHHHHcCCeEEEeccccCceecCcccC
Confidence 999999988653 58999999999999863 46799999999999999999999999999754
|
| >4exb_A Putative uncharacterized protein; aldo-keto reductase, NADP+ binding, oxidoreducta; 2.75A {Pseudomonas aeruginosa} PDB: 4exa_A | Back alignment and structure |
|---|
Probab=100.00 E-value=4e-54 Score=372.45 Aligned_cols=242 Identities=23% Similarity=0.237 Sum_probs=196.1
Q ss_pred CCccccccCceecCCCCccccceeecccccCCC--------CCCCCCHHHHHHHHHHHHHCCCCEEeCcCCcCCCcHHHH
Q 025500 1 MAEEKHQVPRVKLGTQGLEVSKLGYGCMNLSGG--------YSSPVSEEDGISMIKHAFSKGITFFDTADVYGQNANEVL 72 (252)
Q Consensus 1 m~~~~~~m~~~~lg~~g~~vs~lglG~~~~g~~--------~~~~~~~~~~~~~l~~A~~~Gin~~Dta~~Yg~g~se~~ 72 (252)
|+..+..|+||+||++|++||+||||||++++. |+. .+++++.++++.|++.|||+||||+.|| .+|+.
T Consensus 23 ~~~~~~~m~~r~Lg~tg~~vs~lglGt~~~g~~~~~~~~~~~~~-~~~~~~~~~l~~Al~~Gi~~~DTA~~Yg--~sE~~ 99 (292)
T 4exb_A 23 MIRDTLHDLHRPLGDTGLAVSPLGLGTVKFGRDQGVKYPSGFTI-PDDREAADLLALARDLGINLIDTAPAYG--RSEER 99 (292)
T ss_dssp CCCSCSTTCCEECTTSSCEECSEEEECSTTTCC---------CC-CCHHHHHHHHHHHHHTTCCEEECCTTST--THHHH
T ss_pred ccCCCCCceeeecCCCCCccCCEeEcccccCCCcccccccccCC-CCHHHHHHHHHHHHHcCCCEEEcCCccc--hHHHH
Confidence 444455699999999999999999999999863 443 4789999999999999999999999998 69999
Q ss_pred HHHHHhcCCCCCEEEEeccCccCCCCcccccCCChHHHHHHHHHHHHHcCCCcccEEEccCC--CCCCCHH-HHHHHHHH
Q 025500 73 LGKALKQLPREKIQVATKFGIAGIGVAGVIVKGAPDYVRSCCEASLKRLDVDYIDLYYQHRV--DTSVPIE-ETIGEMKK 149 (252)
Q Consensus 73 ig~~l~~~~R~~~~i~tK~~~~~~~~~~~~~~~~~~~i~~~~~~sL~~Lg~d~iDl~~lh~~--~~~~~~~-~~~~~L~~ 149 (252)
+|++|+. +|+++||+||++..... +....+.+++.+++++++||+|||+||||+|++||| +...+.+ ++|++|++
T Consensus 100 lG~al~~-~R~~v~I~TK~~~~~~~-~~~~~~~~~~~i~~~~e~SL~rLg~dyiDl~llH~p~~d~~~~~~~e~~~al~~ 177 (292)
T 4exb_A 100 LGPLLRG-QREHWVIVSKVGEEFVD-GQSVFDFSAAHTRRSVERSLKRLETDRIELVLVHSDGNDLDILENSEVYPTLAA 177 (292)
T ss_dssp HHHHHTT-TGGGCEEEEEESBC--C-CSCCBCCCHHHHHHHHHHHHHHTTSSCEEEEEEECCSCHHHHHHHSSHHHHHHH
T ss_pred HHHHhcc-CCCcEEEEEeeccccCC-CCccCCCCHHHHHHHHHHHHHHhCCCceeEEEEecCCCCccccchHHHHHHHHH
Confidence 9999996 89999999999964321 122345789999999999999999999999999999 4333344 89999999
Q ss_pred HHHcCCccEEEccCCCHHHHHHHhhcCCceEEeeecCccccchhhhHHHHHHHhCCeEEecccCccccCCCCCCCCC-CC
Q 025500 150 LVEEGKIKYIGLSEASPGTIRRAHAVHPITAVQMEWSLWTRDIEEEIIPLCRELGIGIVPYSPLGRGFFGGKAVVEN-VP 228 (252)
Q Consensus 150 l~~~G~ir~iGvs~~~~~~l~~~~~~~~~~~~q~~~~~~~~~~~~~l~~~~~~~gi~v~a~spl~~G~L~~~~~~~~-~~ 228 (252)
|+++|+||+||||||+.++++++++. |+++|++||++++.. .+++++|+++||+|++|+||++|+|++++-.+. .-
T Consensus 178 l~~~Gkir~iGvSn~~~~~l~~~~~~--~~~~Q~~~~~~~~~~-~~l~~~~~~~gi~v~a~spL~~G~L~~~~g~t~aqv 254 (292)
T 4exb_A 178 LKREGLIGAYGLSGKTVEGGLRALRE--GDCAMVTYNLNERAE-RPVIEYAAAHAKGILVKKALASGHACLGAGQDPVRA 254 (292)
T ss_dssp HHHTTSEEEEEEECSSHHHHHHHHHH--SSEEEEECSSSCCTT-HHHHHHHHHTTCEEEEECCSCC--------CCHHHH
T ss_pred HHHCCCceEEEeCCCCHHHHHHHHHh--hcEEeeccccccCCH-HHHHHHHHHCCcEEEEeccccCCccCCCCCCCHHHH
Confidence 99999999999999999999999887 999999999999875 699999999999999999999999987632111 01
Q ss_pred CCccccccCCccccccCccccc
Q 025500 229 ADSFLVLFSVNVYPHHFVSSVS 250 (252)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~ 250 (252)
.-.|++.+.....++||+++++
T Consensus 255 aL~w~l~~~~v~~vI~g~~~~~ 276 (292)
T 4exb_A 255 SFELVFDQPGVAAAIVGTINPL 276 (292)
T ss_dssp HHHHHHHSTTCCEEEECCCCHH
T ss_pred HHHHHHhCCCCeEEEeCCCCHH
Confidence 2234444554567788888765
|
| >1ur3_M Hypothetical oxidoreductase YDHF; NADP binding, aldo-keto reductase; 2.57A {Escherichia coli} SCOP: c.1.7.1 PDB: 1og6_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-52 Score=366.96 Aligned_cols=240 Identities=24% Similarity=0.332 Sum_probs=202.6
Q ss_pred cCceecCCCCccccceeecccccCCCCCCCCCHHHHHHHHHHHHHCCCCEEeCcCCcCCCcHHHHHHHHHhc--CCCCCE
Q 025500 8 VPRVKLGTQGLEVSKLGYGCMNLSGGYSSPVSEEDGISMIKHAFSKGITFFDTADVYGQNANEVLLGKALKQ--LPREKI 85 (252)
Q Consensus 8 m~~~~lg~~g~~vs~lglG~~~~g~~~~~~~~~~~~~~~l~~A~~~Gin~~Dta~~Yg~g~se~~ig~~l~~--~~R~~~ 85 (252)
|++++||++|++||+||||||++|+ |+ .+.+++.++++.|++.|||+||||+.||+|.+|+.+|++|+. .+|+++
T Consensus 23 M~~~~Lg~~~~~vs~lglGt~~~g~-~~--~~~~~~~~~l~~Al~~Gi~~~DTA~~Yg~G~sE~~lG~al~~~~~~R~~v 99 (319)
T 1ur3_M 23 VQRITIAPQGPEFSRFVMGYWRLMD-WN--MSARQLVSFIEEHLDLGVTTVDHADIYGGYQCEAAFGEALKLAPHLRERM 99 (319)
T ss_dssp CCEEECSTTCCEEESSEEECTTTTT-TT--CCHHHHHHHHHHHHHHTCCEEECCSSTTTTTHHHHHHHHHHHCGGGTTTC
T ss_pred CceEECCCCCcccccccEeccccCC-CC--CCHHHHHHHHHHHHHcCCCeEEcccccCCCcHHHHHHHHHHhCCCCCCeE
Confidence 8999999999999999999999986 53 378999999999999999999999999999999999999986 479999
Q ss_pred EEEeccCccCCCCc---ccccCCChHHHHHHHHHHHHHcCCCcccEEEccCCCCCCCHHHHHHHHHHHHHcCCccEEEcc
Q 025500 86 QVATKFGIAGIGVA---GVIVKGAPDYVRSCCEASLKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLS 162 (252)
Q Consensus 86 ~i~tK~~~~~~~~~---~~~~~~~~~~i~~~~~~sL~~Lg~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~G~ir~iGvs 162 (252)
||+||++....... ....+.+++.+++++++||+|||+||||+|++|||+...+.+++|++|++|+++|+||+||||
T Consensus 100 ~I~TK~~~~~~~~~~~~~~~~~~~~~~i~~~~e~SL~rLg~dyiDl~~lH~p~~~~~~~e~~~al~~l~~~Gkir~iGvS 179 (319)
T 1ur3_M 100 EIVSKCGIATTAREENVIGHYITDRDHIIKSAEQSLINLATDHLDLLLIHRPDPLMDADEVADAFKHLHQSGKVRHFGVS 179 (319)
T ss_dssp EEEEEECEECTTSTTCSSCEECCCHHHHHHHHHHHHHHHTCSCBSEEEECSCCTTCCHHHHHHHHHHHHHTTSBCCEEEE
T ss_pred EEEEeeccCCCCCcccccccCCCCHHHHHHHHHHHHHHhCCCCeeEEEecCCCCCCCHHHHHHHHHHHHHCCCccEEEec
Confidence 99999986421100 012357899999999999999999999999999999888899999999999999999999999
Q ss_pred CCCHHHHHHHhhcC--CceEEeeecCccccch-hhhHHHHHHHhCCeEEecccCccccCCCCC-------------CCCC
Q 025500 163 EASPGTIRRAHAVH--PITAVQMEWSLWTRDI-EEEIIPLCRELGIGIVPYSPLGRGFFGGKA-------------VVEN 226 (252)
Q Consensus 163 ~~~~~~l~~~~~~~--~~~~~q~~~~~~~~~~-~~~l~~~~~~~gi~v~a~spl~~G~L~~~~-------------~~~~ 226 (252)
||+.++++++.+.. +|+++|++||++++.. +.+++++|+++||++++|+||++|.|.... ....
T Consensus 180 n~~~~~l~~~~~~~~~~~~~~Q~~~~~~~~~~~~~~ll~~~~~~gi~v~a~spL~~G~L~~~~~~~~~~~~l~~ia~~~g 259 (319)
T 1ur3_M 180 NFTPAQFALLQSRLPFTLATNQVEISPVHQPLLLDGTLDQLQQLRVRPMAWSCLGGGRLFNDDYFQPLRDELAVVAEELN 259 (319)
T ss_dssp SCCHHHHHHHHTTCSSCCCCEEEECBTTBCGGGTSSHHHHHHHHTCCCEEECCCTTTCSSSCGGGHHHHHHHHHHHHHTT
T ss_pred CCCHHHHHHHHHhcCCCcEEEEccCchhhCchhhHHHHHHHHHcCCeEEEeccccCccccCCchhHHHHHHHHHHHHHcC
Confidence 99999999988763 7999999999999875 367999999999999999999999886420 0011
Q ss_pred CCC-----CccccccCCccccccCccccc
Q 025500 227 VPA-----DSFLVLFSVNVYPHHFVSSVS 250 (252)
Q Consensus 227 ~~~-----~~~~~~~~~~~~~~~~~~~~~ 250 (252)
..+ -.|++.++....++||+++++
T Consensus 260 ~t~~aqvaL~w~l~~~~~~~~I~G~~~~~ 288 (319)
T 1ur3_M 260 AGSIEQVVNAWVLRLPSQPLPIIGSGKIE 288 (319)
T ss_dssp CSCHHHHHHHHHHTSTTCCEEEECCSCHH
T ss_pred CChHHHHHHHHHHhCCCCeEEEeCCCCHH
Confidence 222 234444444567788887764
|
| >3lut_A Voltage-gated potassium channel subunit beta-2; voltage gating, potassium channel, KV1.2, gating charges, no analysis, ION transport; HET: NAP; 2.90A {Rattus norvegicus} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.6e-52 Score=370.47 Aligned_cols=212 Identities=31% Similarity=0.503 Sum_probs=190.0
Q ss_pred ccCceecCCCCccccceeecccccCCCCCCCCCHHHHHHHHHHHHHCCCCEEeCcCCcCCCcHHHHHHHHHhc--CCCCC
Q 025500 7 QVPRVKLGTQGLEVSKLGYGCMNLSGGYSSPVSEEDGISMIKHAFSKGITFFDTADVYGQNANEVLLGKALKQ--LPREK 84 (252)
Q Consensus 7 ~m~~~~lg~~g~~vs~lglG~~~~g~~~~~~~~~~~~~~~l~~A~~~Gin~~Dta~~Yg~g~se~~ig~~l~~--~~R~~ 84 (252)
.| ||+||+||++||+||||||.. +|...+.+++.++|+.|+++|||+||||+.||+|.+|+.||++|+. .+|++
T Consensus 37 ~m-yr~lG~tg~~vs~iglGt~~~---~g~~~~~~~~~~~l~~Al~~Gi~~~DTA~~Yg~G~sE~~lG~al~~~~~~R~~ 112 (367)
T 3lut_A 37 QF-YRNLGKSGLRVSCLGLGTWVT---FGGQITDEMAEHLMTLAYDNGINLFDTAEVYAAGKAEVVLGNIIKKKGWRRSS 112 (367)
T ss_dssp CS-EEESTTSSCEEESEEEECTTC---CCCCSCHHHHHHHHHHHHHTTCCEEEEETTGGGGHHHHHHHHHHHHHTCCGGG
T ss_pred hc-eeecCCCCCcccceeECCccc---cCCCCCHHHHHHHHHHHHHcCCCEEECccccCCCchHHHHHHHHHhCCCCCce
Confidence 38 999999999999999999842 3334578999999999999999999999999999999999999997 58999
Q ss_pred EEEEeccCccCCCCcccccCCChHHHHHHHHHHHHHcCCCcccEEEccCCCCCCCHHHHHHHHHHHHHcCCccEEEccCC
Q 025500 85 IQVATKFGIAGIGVAGVIVKGAPDYVRSCCEASLKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEA 164 (252)
Q Consensus 85 ~~i~tK~~~~~~~~~~~~~~~~~~~i~~~~~~sL~~Lg~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~G~ir~iGvs~~ 164 (252)
+||+||+++... .....+.+++.+++++++||+|||+||||+|++|||+...+++++|++|++|+++|+||+||||||
T Consensus 113 v~I~TK~~~~~~--~~~~~~~s~~~i~~~~e~SL~rLg~dyiDl~~lH~pd~~~~~~e~~~al~~l~~~Gkir~iGvSn~ 190 (367)
T 3lut_A 113 LVITTKIFWGGK--AETERGLSRKHIIEGLKASLERLQLEYVDVVFANRPDPNTPMEETVRAMTHVINQGMAMYWGTSRW 190 (367)
T ss_dssp CEEEEEESBCCS--SGGGBSSCHHHHHHHHHHHHHHHTCSCEEEEEESSCCTTSCHHHHHHHHHHHHHTTSEEEEEEESC
T ss_pred EEEEeccccCCC--CccCCCCCHHHHHHHHHHHHHHhCCCccceEEecCCCCCCCHHHHHHHHHHHHHcCCeeEEEecCC
Confidence 999999965331 122345789999999999999999999999999999998899999999999999999999999999
Q ss_pred CHHHHHHHhhc------CCceEEeeecCccccch-hhhHHHHHHHhCCeEEecccCccccCCCCCCC
Q 025500 165 SPGTIRRAHAV------HPITAVQMEWSLWTRDI-EEEIIPLCRELGIGIVPYSPLGRGFFGGKAVV 224 (252)
Q Consensus 165 ~~~~l~~~~~~------~~~~~~q~~~~~~~~~~-~~~l~~~~~~~gi~v~a~spl~~G~L~~~~~~ 224 (252)
+.++++++... .+++++|++||++++.. +.+++++|+++||+|++|+||++|+|++++..
T Consensus 191 ~~~~l~~~~~~~~~~~~~~~~~~Q~~~~~~~~~~~e~~l~~~~~~~gi~v~a~spL~~G~Ltgk~~~ 257 (367)
T 3lut_A 191 SSMEIMEAYSVARQFNLIPPICEQAEYHMFQREKVEVQLPELFHKIGVGAMTWSPLACGIVSGKYDS 257 (367)
T ss_dssp CHHHHHHHHHHHHHHTCCCCCEEEEECBTTBCHHHHTHHHHHHHHHCCEEEEECTTGGGGGGTTTTT
T ss_pred CHHHHHHHHHHHHHcCCCCceeeeccccceecchhHhHHHHHHHHcCCeEEEecccccccccCCcCC
Confidence 99999888653 58999999999999875 45899999999999999999999999998653
|
| >1lqa_A TAS protein; TIM barrel, structure 2 function project, S2F, structural GE oxidoreductase; HET: NDP; 1.60A {Escherichia coli} SCOP: c.1.7.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=7.6e-52 Score=366.39 Aligned_cols=213 Identities=29% Similarity=0.423 Sum_probs=185.3
Q ss_pred cCceecCCCCccccceeecccccCCCCCCCCCHHHHHHHHHHHHHCCCCEEeCcCCcC-------CCcHHHHHHHHHhc-
Q 025500 8 VPRVKLGTQGLEVSKLGYGCMNLSGGYSSPVSEEDGISMIKHAFSKGITFFDTADVYG-------QNANEVLLGKALKQ- 79 (252)
Q Consensus 8 m~~~~lg~~g~~vs~lglG~~~~g~~~~~~~~~~~~~~~l~~A~~~Gin~~Dta~~Yg-------~g~se~~ig~~l~~- 79 (252)
|++|+||++|+.||+||||||+||. ..+.+++.++++.|+++|||+||||+.|| .|.+|+.||++|+.
T Consensus 1 M~~~~lg~tg~~vs~lglGt~~~g~----~~~~~~~~~~l~~Al~~Gi~~~DTA~~Yg~~~~~~~~G~sE~~lG~al~~~ 76 (346)
T 1lqa_A 1 MQYHRIPHSSLEVSTLGLGTMTFGE----QNSEADAHAQLDYAVAQGINLIDVAEMYPVPPRPETQGLTETYVGNWLAKH 76 (346)
T ss_dssp CCEEECTTSSCEEESEEEECTTBTT----TBCHHHHHHHHHHHHHTTCCEEECCTTCSSSCCTTTTTHHHHHHHHHHHHH
T ss_pred CCeeecCCCCCeecCeeEEccccCC----CCCHHHHHHHHHHHHHcCCCEEEChhhcCCCccCCCCCccHHHHHHHHhhc
Confidence 7899999999999999999998764 23789999999999999999999999996 68899999999986
Q ss_pred CCCCCEEEEeccCccCCC---CcccccCCChHHHHHHHHHHHHHcCCCcccEEEccCCC---------------C--CCC
Q 025500 80 LPREKIQVATKFGIAGIG---VAGVIVKGAPDYVRSCCEASLKRLDVDYIDLYYQHRVD---------------T--SVP 139 (252)
Q Consensus 80 ~~R~~~~i~tK~~~~~~~---~~~~~~~~~~~~i~~~~~~sL~~Lg~d~iDl~~lh~~~---------------~--~~~ 139 (252)
.+|+++||+||++..... ......+.+++.+++++++||+|||+||||+|++|||. . ..+
T Consensus 77 ~~R~~~~i~TK~~~~~~~~~~~~~~~~~~~~~~i~~~~~~SL~rL~~dyiDl~~lH~p~~~~~~~~~~~~~~~d~~~~~~ 156 (346)
T 1lqa_A 77 GSREKLIIASKVSGPSRNNDKGIRPDQALDRKNIREALHDSLKRLQTDYLDLYQVHWPQRPTNCFGKLGYSWTDSAPAVS 156 (346)
T ss_dssp CCGGGCEEEEEECCSCCTTCCCSSTTCCSSHHHHHHHHHHHHHHHTSSCEEEEEECSCSSCCSCTTCCSCCCCSSCCSSC
T ss_pred CCCceEEEEEeECCCcCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCceeEEEecCccccccccccccccccccccCCC
Confidence 489999999999753110 00001247899999999999999999999999999993 2 356
Q ss_pred HHHHHHHHHHHHHcCCccEEEccCCCHHHHHHHhhc------CCceEEeeecCccccchhhhHHHHHHHhCCeEEecccC
Q 025500 140 IEETIGEMKKLVEEGKIKYIGLSEASPGTIRRAHAV------HPITAVQMEWSLWTRDIEEEIIPLCRELGIGIVPYSPL 213 (252)
Q Consensus 140 ~~~~~~~L~~l~~~G~ir~iGvs~~~~~~l~~~~~~------~~~~~~q~~~~~~~~~~~~~l~~~~~~~gi~v~a~spl 213 (252)
.+++|++|++|+++|+||+||||||+.++++++... .+++++|++||++++..+.+++++|+++||+|++|+||
T Consensus 157 ~~e~~~al~~l~~~Gkir~iGvSn~~~~~l~~~~~~~~~~~~~~~~~~Q~~~~l~~~~~~~~l~~~~~~~gi~v~a~spL 236 (346)
T 1lqa_A 157 LLDTLDALAEYQRAGKIRYIGVSNETAFGVMRYLHLADKHDLPRIVTIQNPYSLLNRSFEVGLAEVSQYEGVELLAYSCL 236 (346)
T ss_dssp HHHHHHHHHHHHHTTSEEEEEEESCCHHHHHHHHHHHHHHTCCCCCEEEEECBTTBCTHHHHHHHHHHHHCCEEEEECTT
T ss_pred HHHHHHHHHHHHHcCCeEEEEecCCCHHHHHHHHHHHHHcCCCCceEEeccCChhhchhHHHHHHHHHHcCCeEEEecch
Confidence 789999999999999999999999999888776432 46999999999999987788999999999999999999
Q ss_pred ccccCCCCCCC
Q 025500 214 GRGFFGGKAVV 224 (252)
Q Consensus 214 ~~G~L~~~~~~ 224 (252)
++|+|++++..
T Consensus 237 ~~G~L~g~~~~ 247 (346)
T 1lqa_A 237 GFGTLTGKYLN 247 (346)
T ss_dssp GGGGGGTTTGG
T ss_pred hhhhhcCcccc
Confidence 99999988543
|
| >3o0k_A Aldo/keto reductase; ssgcid, ALS collaborative crystallography; 1.80A {Brucella melitensis biovar} | Back alignment and structure |
|---|
Probab=100.00 E-value=6e-50 Score=344.77 Aligned_cols=225 Identities=27% Similarity=0.370 Sum_probs=189.9
Q ss_pred ccccccCceecCCCCccccceeecccccCCCCCCCCCHHHHHHHHHHHHHCCCCEEeCcCCcCCCcHHHHHHHHHhc--C
Q 025500 3 EEKHQVPRVKLGTQGLEVSKLGYGCMNLSGGYSSPVSEEDGISMIKHAFSKGITFFDTADVYGQNANEVLLGKALKQ--L 80 (252)
Q Consensus 3 ~~~~~m~~~~lg~~g~~vs~lglG~~~~g~~~~~~~~~~~~~~~l~~A~~~Gin~~Dta~~Yg~g~se~~ig~~l~~--~ 80 (252)
.+.|+|++++| ++|++||+||||||++ +.+++.++++.|++.|||+||||+.|| +|+.+|++|+. .
T Consensus 21 ~~~~~m~~~~L-~~g~~v~~lglGt~~~--------~~~~~~~~v~~Al~~Gi~~~DTA~~Yg---~E~~lG~al~~~~~ 88 (283)
T 3o0k_A 21 SMIMTVPTVKL-NDGNHIPQLGYGVWQI--------SNDEAVSAVSEALKAGYRHIDTATIYG---NEEGVGKAINGSGI 88 (283)
T ss_dssp CEECCCCEEEC-TTSCEEESBCEECCSC--------CHHHHHHHHHHHHHHTCCEEECCGGGS---CHHHHHHHHHTSSS
T ss_pred cccCCCceEEC-CCCCEECCeeEECccC--------CHHHHHHHHHHHHHcCCCEEECccccc---CHHHHHHHHHHcCC
Confidence 34578999999 8999999999999986 568999999999999999999999999 69999999996 5
Q ss_pred CCCCEEEEeccCccCCCCcccccCCChHHHHHHHHHHHHHcCCCcccEEEccCCCCC-CCHHHHHHHHHHHHHcCCccEE
Q 025500 81 PREKIQVATKFGIAGIGVAGVIVKGAPDYVRSCCEASLKRLDVDYIDLYYQHRVDTS-VPIEETIGEMKKLVEEGKIKYI 159 (252)
Q Consensus 81 ~R~~~~i~tK~~~~~~~~~~~~~~~~~~~i~~~~~~sL~~Lg~d~iDl~~lh~~~~~-~~~~~~~~~L~~l~~~G~ir~i 159 (252)
+|+++||+||++... .+++.+++++++||+|||+||||+|++|||+.. .+..++|++|++|+++|+||+|
T Consensus 89 ~R~~~~i~TK~~~~~---------~~~~~i~~~~e~SL~rLg~dyiDl~~lH~p~~~~~~~~e~~~al~~l~~~Gkir~i 159 (283)
T 3o0k_A 89 ARADIFLTTKLWNSD---------QGYESTLKAFDTSLKKLGTDYVDLYLIHWPMPSKDLFMETWRAFIKLKEEGRVKSI 159 (283)
T ss_dssp CGGGCEEEEEECGGG---------CSHHHHHHHHHHHHHHHTSSCEEEEEECCSCSCHHHHHHHHHHHHHHHHTTSEEEE
T ss_pred CcccEEEEEccCCCC---------CCHHHHHHHHHHHHHHhCCCceeEEEECCCCCCcccHHHHHHHHHHHHHCCCcceE
Confidence 899999999998643 568999999999999999999999999999876 3578999999999999999999
Q ss_pred EccCCCHHHHHHHhhc--CCceEEeeecCccccchhhhHHHHHHHhCCeEEecccCccccCCCCCCC------CCCCCCc
Q 025500 160 GLSEASPGTIRRAHAV--HPITAVQMEWSLWTRDIEEEIIPLCRELGIGIVPYSPLGRGFFGGKAVV------ENVPADS 231 (252)
Q Consensus 160 Gvs~~~~~~l~~~~~~--~~~~~~q~~~~~~~~~~~~~l~~~~~~~gi~v~a~spl~~G~L~~~~~~------~~~~~~~ 231 (252)
|||||+.++++++++. .++.++|++||++.+. .+++++|+++||++++|+||++|.|...... ....+.+
T Consensus 160 GvSn~~~~~l~~~~~~~~~~p~~~Q~~~~~~~~~--~~l~~~~~~~gi~v~a~spL~~G~l~~~~~l~~ia~~~g~t~aq 237 (283)
T 3o0k_A 160 GVSNFRTADLERLIKESGVTPVLNQIELHPQFQQ--DELRLFHGKHDIATEAWSPLGQGKLLEDPTLKSIAEKHAKSVAQ 237 (283)
T ss_dssp EEESCCHHHHHHHHHHHSCCCSEEEEECBTTBCC--HHHHHHHHHTTCEEEEESTTCCC-CTTCHHHHHHHHHHTSCHHH
T ss_pred EeccCcHHHHHHHHHhCCCCeEEEEeecCcccCc--HHHHHHHHHCCcEEEEecCCCCCccccchHHHHHHHHhCCCHHH
Confidence 9999999999998765 4678999999999874 6899999999999999999999988754210 1122223
Q ss_pred cccccC--CccccccCccccc
Q 025500 232 FLVLFS--VNVYPHHFVSSVS 250 (252)
Q Consensus 232 ~~~~~~--~~~~~~~~~~~~~ 250 (252)
.++.|. ....++||.++++
T Consensus 238 vaL~w~l~~~~v~I~g~~~~~ 258 (283)
T 3o0k_A 238 IILRWHIETGNIVIPKSITPA 258 (283)
T ss_dssp HHHHHHHHHTCEECCCCCSHH
T ss_pred HHHHHHHHCCCEEEeCCCCHH
Confidence 222222 1244678887764
|
| >3f7j_A YVGN protein; aldo-keto reductase, oxidoreductase; 1.70A {Bacillus subtilis} PDB: 3d3f_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.4e-49 Score=338.42 Aligned_cols=220 Identities=25% Similarity=0.351 Sum_probs=188.2
Q ss_pred cccCceecCCCCccccceeecccccCCCCCCCCCHHHHHHHHHHHHHCCCCEEeCcCCcCCCcHHHHHHHHHhc--CCCC
Q 025500 6 HQVPRVKLGTQGLEVSKLGYGCMNLSGGYSSPVSEEDGISMIKHAFSKGITFFDTADVYGQNANEVLLGKALKQ--LPRE 83 (252)
Q Consensus 6 ~~m~~~~lg~~g~~vs~lglG~~~~g~~~~~~~~~~~~~~~l~~A~~~Gin~~Dta~~Yg~g~se~~ig~~l~~--~~R~ 83 (252)
..|++++|+ +|++||+||||||+++ +.+++.++++.|++.|||+||||+.|| +|+.+|++|+. .+|+
T Consensus 4 ~~m~~~~L~-~g~~v~~lglGt~~~~-------~~~~~~~~l~~Al~~G~~~~DTA~~Yg---~E~~lG~al~~~~~~R~ 72 (276)
T 3f7j_A 4 SLKDTVKLH-NGVEMPWFGLGVFKVE-------NGNEATESVKAAIKNGYRSIDTAAIYK---NEEGVGIGIKESGVARE 72 (276)
T ss_dssp STTCEEECT-TSCEEESBCEECTTCC-------TTHHHHHHHHHHHHTTCCEEECCGGGS---CHHHHHHHHHHHCSCGG
T ss_pred CCcceEECC-CCCEecceeecCCcCC-------CHHHHHHHHHHHHHcCCCEEECcCccc---CHHHHHHHHhhcCCCcc
Confidence 348999996 9999999999999874 468999999999999999999999999 69999999995 6899
Q ss_pred CEEEEeccCccCCCCcccccCCChHHHHHHHHHHHHHcCCCcccEEEccCCCCCCCHHHHHHHHHHHHHcCCccEEEccC
Q 025500 84 KIQVATKFGIAGIGVAGVIVKGAPDYVRSCCEASLKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSE 163 (252)
Q Consensus 84 ~~~i~tK~~~~~~~~~~~~~~~~~~~i~~~~~~sL~~Lg~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~G~ir~iGvs~ 163 (252)
++||+||++... .+++.+++++++||+|||+||||+|++|||+... ..++|++|++|+++|+||+|||||
T Consensus 73 ~~~i~TK~~~~~---------~~~~~v~~~~~~SL~rLg~dyiDl~~lH~p~~~~-~~~~~~~l~~l~~~Gkir~iGvSn 142 (276)
T 3f7j_A 73 ELFITSKVWNED---------QGYETTLAAFEKSLERLQLDYLDLYLIHWPGKDK-YKDTWRALEKLYKDGKIRAIGVSN 142 (276)
T ss_dssp GCEEEEEECGGG---------CSHHHHHHHHHHHHHHHTCSCEEEEEESCCCSSS-HHHHHHHHHHHHHTTSEEEEEEES
T ss_pred cEEEEEeeCCCC---------CCHHHHHHHHHHHHHHhCCCeeEEEEEecCCCCc-HHHHHHHHHHHHHcCCccEEEecc
Confidence 999999997643 5799999999999999999999999999997654 889999999999999999999999
Q ss_pred CCHHHHHHHhhc--CCceEEeeecCccccchhhhHHHHHHHhCCeEEecccCccccCCCCCCC------CCCCCCc----
Q 025500 164 ASPGTIRRAHAV--HPITAVQMEWSLWTRDIEEEIIPLCRELGIGIVPYSPLGRGFFGGKAVV------ENVPADS---- 231 (252)
Q Consensus 164 ~~~~~l~~~~~~--~~~~~~q~~~~~~~~~~~~~l~~~~~~~gi~v~a~spl~~G~L~~~~~~------~~~~~~~---- 231 (252)
|+.++++++++. .++.++|++||++.+. .+++++|+++||++++|+||++|.|...... ....+.+
T Consensus 143 ~~~~~l~~~~~~~~~~~~~~Q~~~~~~~~~--~~l~~~~~~~gi~v~a~spl~~G~l~~~~~l~~ia~~~g~t~aqval~ 220 (276)
T 3f7j_A 143 FQVHHLEELLKDAEIKPMVNQVEFHPRLTQ--KELRDYCKGQGIQLEAWSPLMQGQLLDNEVLTQIAEKHNKSVAQVILR 220 (276)
T ss_dssp CCHHHHHHHHHHCSSCCSEEEEECBTTBCC--HHHHHHHHHHTCEEEEESTTGGGTTTTCHHHHHHHHHHTCCHHHHHHH
T ss_pred CCHHHHHHHHHhcCCCceeeeeeeccccCC--HHHHHHHHHCCCEEEEecCCCCCccCCCHHHHHHHHHhCCCHHHHHHH
Confidence 999999999765 4678999999999874 7899999999999999999999987754211 1122222
Q ss_pred cccccCCccccccCccccc
Q 025500 232 FLVLFSVNVYPHHFVSSVS 250 (252)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~ 250 (252)
|++.+ ...++||+++++
T Consensus 221 w~l~~--~~v~i~g~~~~~ 237 (276)
T 3f7j_A 221 WDLQH--GVVTIPKSIKEH 237 (276)
T ss_dssp HHHHT--TCEECCBCCSHH
T ss_pred HHHhC--CCEEeeCCCCHH
Confidence 33333 345788887765
|
| >3ln3_A Dihydrodiol dehydrogenase; putative reductase, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; HET: MLY MSE NAD; 1.18A {Mus musculus} SCOP: c.1.7.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=9.1e-49 Score=343.83 Aligned_cols=195 Identities=25% Similarity=0.383 Sum_probs=175.6
Q ss_pred ccccCceecCCCCccccceeecccccCCCCCCCCCHHHHHHHHHHHHHCCCCEEeCcCCcCCCcHHHHHHHHHhc-----
Q 025500 5 KHQVPRVKLGTQGLEVSKLGYGCMNLSGGYSSPVSEEDGISMIKHAFSKGITFFDTADVYGQNANEVLLGKALKQ----- 79 (252)
Q Consensus 5 ~~~m~~~~lg~~g~~vs~lglG~~~~g~~~~~~~~~~~~~~~l~~A~~~Gin~~Dta~~Yg~g~se~~ig~~l~~----- 79 (252)
.++|++++| +||++||+||||||+++. .+.+++.++++.|+++|||+||||+.|| +|+.+|++|++
T Consensus 3 ~~~m~~~~L-~tg~~v~~lglGt~~~~~-----~~~~~~~~~v~~Al~~Gi~~~DTA~~Yg---~E~~lG~al~~~~~~~ 73 (324)
T 3ln3_A 3 SSXQHCVXL-NDGHLIPALGFGTYXPXE-----VPXSXSLEAACLALDVGYRHVDTAYAYQ---VEEEIGQAIQSXIXAG 73 (324)
T ss_dssp ---CCEEEC-TTSCEEESSEEECCCCTT-----SCHHHHHHHHHHHHHHTCCEEECCGGGT---CHHHHHHHHHHHHHTT
T ss_pred CcCCceEEC-CCCCCcCCeeecCCcccC-----CChHHHHHHHHHHHHcCCCEEECccccc---CHHHHHHHHHHhhccC
Confidence 357999999 999999999999999752 3789999999999999999999999999 79999999985
Q ss_pred -CCCCCEEEEeccCccCCCCcccccCCChHHHHHHHHHHHHHcCCCcccEEEccCCCC-------------------CCC
Q 025500 80 -LPREKIQVATKFGIAGIGVAGVIVKGAPDYVRSCCEASLKRLDVDYIDLYYQHRVDT-------------------SVP 139 (252)
Q Consensus 80 -~~R~~~~i~tK~~~~~~~~~~~~~~~~~~~i~~~~~~sL~~Lg~d~iDl~~lh~~~~-------------------~~~ 139 (252)
++|+++||+||++... .+++.+++++++||+|||+||||+|++|||+. ..+
T Consensus 74 ~~~R~~~~I~TK~~~~~---------~~~~~v~~~~~~SL~rL~~dyiDl~llH~p~~~~~~~~~~~~~~~~~~~~~~~~ 144 (324)
T 3ln3_A 74 VVXREDLFVTTKLWCTC---------FRPELVXPALEXSLXXLQLDYVDLYIMHYPVPMXSGDNDFPVNEQGXSLLDTVD 144 (324)
T ss_dssp SCCGGGCEEEEEECGGG---------CSHHHHHHHHHHHHHHHTCSCEEEEEESCSCCBCCSSCSSCBCTTCCBCBCCCC
T ss_pred CcccceeEEEeeeCCcc---------CCHHHHHHHHHHHHHHhCCCcceEEEEecCccccccccccccccccccccccCC
Confidence 5899999999997643 57999999999999999999999999999975 345
Q ss_pred HHHHHHHHHHHHHcCCccEEEccCCCHHHHHHHhhcC----CceEEeeecCccccchhhhHHHHHHHhCCeEEecccCcc
Q 025500 140 IEETIGEMKKLVEEGKIKYIGLSEASPGTIRRAHAVH----PITAVQMEWSLWTRDIEEEIIPLCRELGIGIVPYSPLGR 215 (252)
Q Consensus 140 ~~~~~~~L~~l~~~G~ir~iGvs~~~~~~l~~~~~~~----~~~~~q~~~~~~~~~~~~~l~~~~~~~gi~v~a~spl~~ 215 (252)
.+++|++|++|+++|+||+||||||+.++++++++.. ++.++|++||++.+. .+++++|+++||+|++|+||++
T Consensus 145 ~~e~~~al~~l~~~Gkir~iGvSn~~~~~l~~~~~~~~~~~~p~~~Q~~~~~~~~~--~~l~~~~~~~gi~v~a~spL~~ 222 (324)
T 3ln3_A 145 FCDTWERLEECXDAGLVXSIGVSNFNHRQLERILNXPGLXYXPVCNQVECHLYLNQ--RXLLDYCESXDIVLVAYGALGT 222 (324)
T ss_dssp HHHHHHHHHHHHHTTSEEEEEEESCCHHHHHHHHTCTTCCCCCSEEEEECBTTBCC--HHHHHHHHHTTCEEEEESTTSC
T ss_pred HHHHHHHHHHHHhcCCeeEEEecCCcHHHHHHHHHhcCccCCceeeEeeeCcccch--HHHHHHHHHcCCEEEEecCCCC
Confidence 7899999999999999999999999999999998763 377999999999873 7899999999999999999999
Q ss_pred ccCC
Q 025500 216 GFFG 219 (252)
Q Consensus 216 G~L~ 219 (252)
|.+.
T Consensus 223 g~~~ 226 (324)
T 3ln3_A 223 QRYX 226 (324)
T ss_dssp CCCT
T ss_pred CCcc
Confidence 9864
|
| >1hw6_A 2,5-diketo-D-gluconic acid reductase; aldo-keto reductase, TIM barrel, oxidoreductase; 1.90A {Corynebacterium SP} SCOP: c.1.7.1 PDB: 1a80_A* 1m9h_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-49 Score=340.24 Aligned_cols=188 Identities=26% Similarity=0.380 Sum_probs=169.5
Q ss_pred cccCceecCCCCccccceeecccccCCCCCCCCCHHHHHHHHHHHHHCCCCEEeCcCCcCCCcHHHHHHHHHhc--CCCC
Q 025500 6 HQVPRVKLGTQGLEVSKLGYGCMNLSGGYSSPVSEEDGISMIKHAFSKGITFFDTADVYGQNANEVLLGKALKQ--LPRE 83 (252)
Q Consensus 6 ~~m~~~~lg~~g~~vs~lglG~~~~g~~~~~~~~~~~~~~~l~~A~~~Gin~~Dta~~Yg~g~se~~ig~~l~~--~~R~ 83 (252)
|+|++++| ++|++||+||||||+++ .+++.++++.|++.|||+||||+.|| +|+.+|++|+. .+|+
T Consensus 1 m~M~~~~l-~~g~~v~~lglGt~~~~--------~~~~~~~l~~Al~~G~~~iDTA~~Yg---~E~~vG~al~~~~~~R~ 68 (278)
T 1hw6_A 1 MTVPSIVL-NDGNSIPQLGYGVFKVP--------PADTQRAVEEALEVGYRHIDTAAIYG---NEEGVGAAIAASGIARD 68 (278)
T ss_dssp -CCCEEEC-TTSCEEESBCEECCSCC--------GGGHHHHHHHHHHHTCCEEECGGGTT---CCHHHHHHHHHHCCCGG
T ss_pred CCCceEEC-CCCCccCCeeEECCcCC--------hHHHHHHHHHHHHcCCCEEECccccc---CHHHHHHHHHHcCCChh
Confidence 67999999 99999999999999864 36789999999999999999999999 69999999985 6899
Q ss_pred CEEEEeccCccCCCCcccccCCChHHHHHHHHHHHHHcCCCcccEEEccCCCC-CCCHHHHHHHHHHHHHcCCccEEEcc
Q 025500 84 KIQVATKFGIAGIGVAGVIVKGAPDYVRSCCEASLKRLDVDYIDLYYQHRVDT-SVPIEETIGEMKKLVEEGKIKYIGLS 162 (252)
Q Consensus 84 ~~~i~tK~~~~~~~~~~~~~~~~~~~i~~~~~~sL~~Lg~d~iDl~~lh~~~~-~~~~~~~~~~L~~l~~~G~ir~iGvs 162 (252)
++||+||++... .+++.+++++++||+|||+||||+|++|||+. ..+..++|++|++|+++|+||+||||
T Consensus 69 ~~~i~TK~~~~~---------~~~~~v~~~~~~SL~rLg~dyiDl~llH~p~~~~~~~~e~~~al~~l~~~Gkir~iGvS 139 (278)
T 1hw6_A 69 DLFITTKLWNDR---------HDGDEPAAAIAESLAKLALDQVDLYLVHWPTPAADNYVHAWEKMIELRAAGLTRSIGVS 139 (278)
T ss_dssp GCEEEEEECCC--------------CHHHHHHHHHHHHTCSCEEEEEECCCCTTCSSHHHHHHHHHHHHHTTSEEEEEEE
T ss_pred hEEEEEeeCCCC---------CCHHHHHHHHHHHHHHhCCCCEEEEEEcCCCCCCCCHHHHHHHHHHHHHcCCccEEEec
Confidence 999999997532 56889999999999999999999999999987 36788999999999999999999999
Q ss_pred CCCHHHHHHHhhc--CCceEEeeecCccccchhhhHHHHHHHhCCeEEecccCccc
Q 025500 163 EASPGTIRRAHAV--HPITAVQMEWSLWTRDIEEEIIPLCRELGIGIVPYSPLGRG 216 (252)
Q Consensus 163 ~~~~~~l~~~~~~--~~~~~~q~~~~~~~~~~~~~l~~~~~~~gi~v~a~spl~~G 216 (252)
||+.++++++++. .+++++|++||++.+. .+++++|+++||++++|+||++|
T Consensus 140 n~~~~~l~~~~~~~~~~p~~~Q~~~~~~~~~--~~l~~~~~~~gi~v~a~spl~~G 193 (278)
T 1hw6_A 140 NHLVPHLERIVAATGVVPAVNQIELHPAYQQ--REITDWAAAHDVKIESWGPLGQG 193 (278)
T ss_dssp SCCHHHHHHHHHHHSCCCSEEEEECBTTBCC--HHHHHHHHHTTCEEEEESTTGGG
T ss_pred CCCHHHHHHHHHhcCCCceeEEEEeCcccCC--HHHHHHHHHcCCEEEEeccccCC
Confidence 9999999998875 4679999999999986 68999999999999999999999
|
| >3up8_A Putative 2,5-diketo-D-gluconic acid reductase B; nysgrc, PSI-biology, structural genomics; 1.96A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=100.00 E-value=9.9e-49 Score=339.24 Aligned_cols=192 Identities=26% Similarity=0.506 Sum_probs=177.9
Q ss_pred cccCceecCCCCccccceeecccccCCCCCCCCCHHHHHHHHHHHHHCCCCEEeCcCCcCCCcHHHHHHHHHhc--CCCC
Q 025500 6 HQVPRVKLGTQGLEVSKLGYGCMNLSGGYSSPVSEEDGISMIKHAFSKGITFFDTADVYGQNANEVLLGKALKQ--LPRE 83 (252)
Q Consensus 6 ~~m~~~~lg~~g~~vs~lglG~~~~g~~~~~~~~~~~~~~~l~~A~~~Gin~~Dta~~Yg~g~se~~ig~~l~~--~~R~ 83 (252)
+.|++++|| |++||.||||||++ +.+++.++++.|++.|||+||||+.|| +|+.+|++|+. ++|+
T Consensus 22 ~~m~~~~l~--g~~v~~lglGt~~~--------~~~~~~~~v~~Al~~Gi~~~DTA~~Yg---~E~~lG~al~~~~~~R~ 88 (298)
T 3up8_A 22 SMMHAVSSN--GANIPALGFGTFRM--------SGAEVLRILPQALKLGFRHVDTAQIYG---NEAEVGEAIQKSGIPRA 88 (298)
T ss_dssp GSCCEECCT--TCCEESEEEECTTC--------CHHHHHHHHHHHHHHTCCEEECCTTTT---CHHHHHHHHHHHTCCGG
T ss_pred ccCceEEeC--CeecCCeeEECCcC--------CHHHHHHHHHHHHHcCCCEEECCCccc---CHHHHHHHHHHcCCChH
Confidence 348999997 99999999999986 458999999999999999999999999 79999999997 5899
Q ss_pred CEEEEeccCccCCCCcccccCCChHHHHHHHHHHHHHcCCCcccEEEccCCCCCCCHHHHHHHHHHHHHcCCccEEEccC
Q 025500 84 KIQVATKFGIAGIGVAGVIVKGAPDYVRSCCEASLKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSE 163 (252)
Q Consensus 84 ~~~i~tK~~~~~~~~~~~~~~~~~~~i~~~~~~sL~~Lg~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~G~ir~iGvs~ 163 (252)
++||+||++... .+++.+++++++||+|||+||||+|++|||+...+.+++|++|++|+++|+||+|||||
T Consensus 89 ~v~I~TK~~~~~---------~~~~~i~~~~e~SL~rLg~dyiDl~llH~p~~~~~~~e~~~al~~l~~~Gkir~iGvSn 159 (298)
T 3up8_A 89 DVFLTTKVWVDN---------YRHDAFIASVDESLRKLRTDHVDLLLLHWPGSDVPMAERIGALNEVRNAGKVRHIGISN 159 (298)
T ss_dssp GCEEEEEECGGG---------CSHHHHHHHHHHHHHHHTSSCEEEEEESCSCCSSCHHHHHHHHHHHHHTTSEEEEEEES
T ss_pred HEEEEeccCCCC---------CCHHHHHHHHHHHHHHhCCCcEEEEEEccCCCCCCHHHHHHHHHHHHHcCCccEEEEcC
Confidence 999999998543 67999999999999999999999999999998888999999999999999999999999
Q ss_pred CCHHHHHHHhhcC--CceEEeeecCccccchhhhHHHHHHHhCCeEEecccCccccCCCC
Q 025500 164 ASPGTIRRAHAVH--PITAVQMEWSLWTRDIEEEIIPLCRELGIGIVPYSPLGRGFFGGK 221 (252)
Q Consensus 164 ~~~~~l~~~~~~~--~~~~~q~~~~~~~~~~~~~l~~~~~~~gi~v~a~spl~~G~L~~~ 221 (252)
|+.++++++.+.. +++++|++||++.+. .+++++|+++||++++|+||++|.|...
T Consensus 160 ~~~~~l~~~~~~~~~~~~~~Q~~~~~~~~~--~~l~~~~~~~gi~v~a~spL~~G~l~~~ 217 (298)
T 3up8_A 160 FNTTQMEEAARLSDAPIATNQVEYHPYLDQ--TKVLQTARRLGMSLTSYYAMANGKVPAD 217 (298)
T ss_dssp CCHHHHHHHHHHCSSCEEEEEEECBTTBCC--HHHHHHHHHHTCEEEEECTTGGGHHHHC
T ss_pred CCHHHHHHHHHhCCCCceEEEEeccccccc--HHHHHHHHHCCCEEEEECCCcCCccccc
Confidence 9999999998763 799999999999884 7899999999999999999999987654
|
| >1vbj_A Prostaglandin F synthase; TIM barrel, oxidoreductase; HET: NAP CIT; 2.10A {Trypanosoma brucei} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-48 Score=336.17 Aligned_cols=220 Identities=24% Similarity=0.346 Sum_probs=187.7
Q ss_pred cccCceecCCCCccccceeecccccCCCCCCCCCHHHHHHHHHHHHHCCCCEEeCcCCcCCCcHHHHHHHHHhc--CCCC
Q 025500 6 HQVPRVKLGTQGLEVSKLGYGCMNLSGGYSSPVSEEDGISMIKHAFSKGITFFDTADVYGQNANEVLLGKALKQ--LPRE 83 (252)
Q Consensus 6 ~~m~~~~lg~~g~~vs~lglG~~~~g~~~~~~~~~~~~~~~l~~A~~~Gin~~Dta~~Yg~g~se~~ig~~l~~--~~R~ 83 (252)
..|++++| ++|+.||+||||||+++ +.+++.++++.|++.|||+||||+.|| +|+.+|++|+. .+|+
T Consensus 7 ~~m~~~~l-~~g~~v~~lglGt~~~~-------~~~~~~~~v~~Al~~G~~~iDTA~~Yg---~E~~vG~al~~~~~~R~ 75 (281)
T 1vbj_A 7 ALTQSLKL-SNGVMMPVLGFGMWKLQ-------DGNEAETATMWAIKSGYRHIDTAAIYK---NEESAGRAIASCGVPRE 75 (281)
T ss_dssp CCCCEEEC-TTSCEEESBCEECTTCC-------TTHHHHHHHHHHHHHTCCEEECCGGGT---CHHHHHHHHHHSSSCGG
T ss_pred CCCceEEC-CCCCeecCeeEECCcCC-------CHHHHHHHHHHHHHcCCCEEECCcccC---CHHHHHHHHHhcCCChh
Confidence 35999999 89999999999999874 358899999999999999999999999 69999999995 5899
Q ss_pred CEEEEeccCccCCCCcccccCCChHHHHHHHHHHHHHcCCCcccEEEccCCCCCCCHHHHHHHHHHHHHcCCccEEEccC
Q 025500 84 KIQVATKFGIAGIGVAGVIVKGAPDYVRSCCEASLKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSE 163 (252)
Q Consensus 84 ~~~i~tK~~~~~~~~~~~~~~~~~~~i~~~~~~sL~~Lg~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~G~ir~iGvs~ 163 (252)
++||+||++... .+++.+++++++||+|||+||||+|++|||+ ..+..++|++|++|+++|+||+|||||
T Consensus 76 ~~~i~TK~~~~~---------~~~~~v~~~~~~SL~rL~~dyiDl~~lH~p~-~~~~~~~~~al~~l~~~Gkir~iGvSn 145 (281)
T 1vbj_A 76 ELFVTTKLWNSD---------QGYESTLSAFEKSIKKLGLEYVDLYLIHWPG-KDKFIDTWKAFEKLYADKKVRAIGVSN 145 (281)
T ss_dssp GCEEEEEECGGG---------CSHHHHHHHHHHHHHHHTCSCBSEEEESCCC-SSCHHHHHHHHHHHHHTTSBSCEEEES
T ss_pred HEEEEeccCCCC---------CCHHHHHHHHHHHHHHhCCCcEEEEEEcCCC-CCCHHHHHHHHHHHHHCCCccEEEeeC
Confidence 999999998633 5799999999999999999999999999998 667889999999999999999999999
Q ss_pred CCHHHHHHHhhc--CCceEEeeecCccccchhhhHHHHHHHhCCeEEecccCccccCCCCCC------CCCCCCC----c
Q 025500 164 ASPGTIRRAHAV--HPITAVQMEWSLWTRDIEEEIIPLCRELGIGIVPYSPLGRGFFGGKAV------VENVPAD----S 231 (252)
Q Consensus 164 ~~~~~l~~~~~~--~~~~~~q~~~~~~~~~~~~~l~~~~~~~gi~v~a~spl~~G~L~~~~~------~~~~~~~----~ 231 (252)
|+.++++++++. .+++++|++||++.+. .+++++|+++||++++|+||++|.+..... .....+. .
T Consensus 146 ~~~~~l~~~~~~~~~~p~~~Q~~~~~~~~~--~~l~~~~~~~gi~v~a~spL~~G~~~~~~~l~~ia~~~g~s~aqvaL~ 223 (281)
T 1vbj_A 146 FHEHHIEELLKHCKVAPMVNQIELHPLLNQ--KALCEYCKSKNIAVTAWSPLGQGHLVEDARLKAIGGKYGKTAAQVMLR 223 (281)
T ss_dssp CCHHHHHHHHTSCSSCCSEEEEECBTTBCC--HHHHHHHHHTTCEEEEESTTGGGTTTTCHHHHHHHHTTTCCHHHHHHH
T ss_pred CCHHHHHHHHHhCCCCceeeeEEeccccCC--HHHHHHHHHcCCEEEEecCCcCCCCCCCHHHHHHHHHhCCCHHHHHHH
Confidence 999999999876 4679999999999885 689999999999999999999995433210 1112222 2
Q ss_pred cccccCCccccccCccccc
Q 025500 232 FLVLFSVNVYPHHFVSSVS 250 (252)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~ 250 (252)
|++.+ .+.++||+++++
T Consensus 224 w~l~~--~~~~I~g~~~~~ 240 (281)
T 1vbj_A 224 WEIQA--GVITIPKSGNEA 240 (281)
T ss_dssp HHHHT--TCEECCBCSCHH
T ss_pred HHHHC--CCEEecCCCCHH
Confidence 33333 357788887764
|
| >1afs_A 3-alpha-HSD, 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, NAD; HET: NAP TES; 2.50A {Rattus norvegicus} SCOP: c.1.7.1 PDB: 1lwi_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.2e-49 Score=343.92 Aligned_cols=196 Identities=29% Similarity=0.406 Sum_probs=176.9
Q ss_pred ccccCceecCCCCccccceeecccccCCCCCCCCCHHHHHHHHHHHHHCCCCEEeCcCCcCCCcHHHHHHHHHhc-----
Q 025500 5 KHQVPRVKLGTQGLEVSKLGYGCMNLSGGYSSPVSEEDGISMIKHAFSKGITFFDTADVYGQNANEVLLGKALKQ----- 79 (252)
Q Consensus 5 ~~~m~~~~lg~~g~~vs~lglG~~~~g~~~~~~~~~~~~~~~l~~A~~~Gin~~Dta~~Yg~g~se~~ig~~l~~----- 79 (252)
.++|++++| ++|+.||+||||||++|. .+.+++.++++.|++.|||+||||+.|| +|+.+|++|+.
T Consensus 2 ~~~~~~~~L-~tg~~v~~lglGt~~~g~-----~~~~~~~~~l~~Al~~G~~~iDTA~~Yg---~E~~vG~al~~~~~~g 72 (323)
T 1afs_A 2 DSISLRVAL-NDGNFIPVLGFGTTVPEK-----VAKDEVIKATKIAIDNGFRHFDSAYLYE---VEEEVGQAIRSKIEDG 72 (323)
T ss_dssp CGGGCEEEC-TTSCEEESSEEECCCCTT-----SCTTHHHHHHHHHHHTTCCEEECCTTTT---CHHHHHHHHHHHHHTT
T ss_pred CCCCceEEC-CCCCeECCeeEecccCCC-----CCHHHHHHHHHHHHHcCCCEEECccccc---CHHHHHHHHHHHHhcC
Confidence 367899999 899999999999998753 3568899999999999999999999999 69999999986
Q ss_pred -CCCCCEEEEeccCccCCCCcccccCCChHHHHHHHHHHHHHcCCCcccEEEccCCCC-------------------CCC
Q 025500 80 -LPREKIQVATKFGIAGIGVAGVIVKGAPDYVRSCCEASLKRLDVDYIDLYYQHRVDT-------------------SVP 139 (252)
Q Consensus 80 -~~R~~~~i~tK~~~~~~~~~~~~~~~~~~~i~~~~~~sL~~Lg~d~iDl~~lh~~~~-------------------~~~ 139 (252)
++|+++||+||++... .+++.+++++++||+|||+||||+|++|||+. ..+
T Consensus 73 ~~~R~~~~I~TK~~~~~---------~~~~~v~~~~~~SL~rLg~dyiDl~llH~p~~~~~~~~~~~~d~~~~~~~~~~~ 143 (323)
T 1afs_A 73 TVKREDIFYTSKLWSTF---------HRPELVRTCLEKTLKSTQLDYVDLYIIHFPMALQPGDIFFPRDEHGKLLFETVD 143 (323)
T ss_dssp SCCGGGCEEEEEECGGG---------CSTTTHHHHHHHHHHHHCCSSEEEEEESCSCEECSSSSSSCBCTTCCBCEECCC
T ss_pred CCChHHeEEEEecCCCc---------CCHHHHHHHHHHHHHHhCCCceeEEEecCcCcCCCCcccCcccccccccccCCC
Confidence 5899999999997533 56889999999999999999999999999942 235
Q ss_pred HHHHHHHHHHHHHcCCccEEEccCCCHHHHHHHhhcC----CceEEeeecCccccchhhhHHHHHHHhCCeEEecccCcc
Q 025500 140 IEETIGEMKKLVEEGKIKYIGLSEASPGTIRRAHAVH----PITAVQMEWSLWTRDIEEEIIPLCRELGIGIVPYSPLGR 215 (252)
Q Consensus 140 ~~~~~~~L~~l~~~G~ir~iGvs~~~~~~l~~~~~~~----~~~~~q~~~~~~~~~~~~~l~~~~~~~gi~v~a~spl~~ 215 (252)
.+++|++|++|+++|+||+||||||+.++++++++.. +|+++|++||++.+. .+++++|+++||+|++|+||++
T Consensus 144 ~~e~~~ale~l~~~Gkir~iGvSn~~~~~l~~~~~~~~~~~~p~~~Q~~~~~~~~~--~~l~~~~~~~gI~v~a~spL~~ 221 (323)
T 1afs_A 144 ICDTWEAMEKCKDAGLAKSIGVSNFNCRQLERILNKPGLKYKPVCNQVECHLYLNQ--SKMLDYCKSKDIILVSYCTLGS 221 (323)
T ss_dssp HHHHHHHHHHHHHTTSEEEEEEESCCHHHHHHHHTCTTCCSCCSEEEEECBTTBCC--HHHHHHHHHHTCEEEEESTTSC
T ss_pred HHHHHHHHHHHHHcCCcCEEEeeCCCHHHHHHHHHhcCcCCCCEEEeeccccccch--HHHHHHHHHcCCEEEEecCccC
Confidence 7899999999999999999999999999999998763 679999999998875 6899999999999999999999
Q ss_pred ccCCC
Q 025500 216 GFFGG 220 (252)
Q Consensus 216 G~L~~ 220 (252)
|.|++
T Consensus 222 G~l~~ 226 (323)
T 1afs_A 222 SRDKT 226 (323)
T ss_dssp CCCTT
T ss_pred Ccccc
Confidence 99875
|
| >3buv_A 3-OXO-5-beta-steroid 4-dehydrogenase; 5-beta-reductase, catalytic tetrad, hepes, NADP, bIle catabolism, disease mutation, lipid metabolism; HET: NAP EPE; 1.35A {Homo sapiens} PDB: 3bur_A* 3bv7_A* 3caq_A* 3cas_A* 3cav_A* 3g1r_A* 3cot_A* 3dop_A* 3cmf_A* 3uzx_A* 3uzw_A* 3uzy_A* 3uzz_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-48 Score=343.47 Aligned_cols=195 Identities=24% Similarity=0.358 Sum_probs=176.3
Q ss_pred cccCceecCCCCccccceeecccccCCCCCCCCCHHHHHHHHHHHHHCCCCEEeCcCCcCCCcHHHHHHHHHhc------
Q 025500 6 HQVPRVKLGTQGLEVSKLGYGCMNLSGGYSSPVSEEDGISMIKHAFSKGITFFDTADVYGQNANEVLLGKALKQ------ 79 (252)
Q Consensus 6 ~~m~~~~lg~~g~~vs~lglG~~~~g~~~~~~~~~~~~~~~l~~A~~~Gin~~Dta~~Yg~g~se~~ig~~l~~------ 79 (252)
+++++++| ++|++||+||||||++|+ ..+.+++.++++.|++.|||+||||+.|| +|+.+|++|+.
T Consensus 5 ~~~~~~~L-~tg~~v~~lglGt~~~g~----~~~~~~~~~~l~~Al~~G~~~iDTA~~Yg---~E~~vG~al~~~~~~g~ 76 (326)
T 3buv_A 5 AASHRIPL-SDGNSIPIIGLGTYSEPK----STPKGACATSVKVAIDTGYRHIDGAYIYQ---NEHEVGEAIREKIAEGK 76 (326)
T ss_dssp SSCCEEEC-TTSCEEESBCEECCCCGG----GCCTTHHHHHHHHHHHHTCCEEECCGGGT---CHHHHHHHHHHHHHTTS
T ss_pred CCCCeEEC-CCCCeeCCeeEcccCCCC----CCCHHHHHHHHHHHHHcCCCEEECccccC---CHHHHHHHHHHHHhcCC
Confidence 45889999 899999999999999763 23668899999999999999999999999 69999999986
Q ss_pred CCCCCEEEEeccCccCCCCcccccCCChHHHHHHHHHHHHHcCCCcccEEEccCCCC-------------------CCCH
Q 025500 80 LPREKIQVATKFGIAGIGVAGVIVKGAPDYVRSCCEASLKRLDVDYIDLYYQHRVDT-------------------SVPI 140 (252)
Q Consensus 80 ~~R~~~~i~tK~~~~~~~~~~~~~~~~~~~i~~~~~~sL~~Lg~d~iDl~~lh~~~~-------------------~~~~ 140 (252)
++|+++||+||++... .+++.+++++++||+|||+||||+|++|||+. ..+.
T Consensus 77 ~~R~~~~i~TK~~~~~---------~~~~~v~~~~~~SL~rL~~dyiDl~llH~p~~~~~~~~~~~~~~~~~~~~~~~~~ 147 (326)
T 3buv_A 77 VRREDIFYCGKLWATN---------HVPEMVRPTLERTLRVLQLDYVDLYIIEVPMAFKPGDEIYPRDENGKWLYHKSNL 147 (326)
T ss_dssp CCGGGCEEEEEECGGG---------CSHHHHHHHHHHHHHHHTCSCEEEEEESCSCCBCCSSCSSCBCTTCCBCBCCCCH
T ss_pred CChhHeEEEeeeCCCc---------CCHHHHHHHHHHHHHHhCCCceeEEEEccCCccCCccccCccccccccccccccH
Confidence 5899999999997533 57999999999999999999999999999963 1257
Q ss_pred HHHHHHHHHHHHcCCccEEEccCCCHHHHHHHhhcC--C--ceEEeeecCccccchhhhHHHHHHHhCCeEEecccCccc
Q 025500 141 EETIGEMKKLVEEGKIKYIGLSEASPGTIRRAHAVH--P--ITAVQMEWSLWTRDIEEEIIPLCRELGIGIVPYSPLGRG 216 (252)
Q Consensus 141 ~~~~~~L~~l~~~G~ir~iGvs~~~~~~l~~~~~~~--~--~~~~q~~~~~~~~~~~~~l~~~~~~~gi~v~a~spl~~G 216 (252)
.++|++|++|+++|+||+||||||+.++++++++.. + ++++|++||++.+. .+++++|+++||+|++|+||++|
T Consensus 148 ~e~~~ale~l~~~Gkir~iGvSn~~~~~l~~~~~~~~~~~~p~~~Q~~~~~~~~~--~~l~~~~~~~gI~v~a~spL~~G 225 (326)
T 3buv_A 148 CATWEAMEACKDAGLVKSLGVSNFNRRQLELILNKPGLKHKPVSNQVECHPYFTQ--PKLLKFCQQHDIVITAYSPLGTS 225 (326)
T ss_dssp HHHHHHHHHHHHTTSEEEEEEESCCHHHHHHHHTCTTCCSCCCEEEEECBTTBCC--HHHHHHHHHTTCEEEEESTTCCC
T ss_pred HHHHHHHHHHHHcCCccEEEEeCCCHHHHHHHHHhCCCCCCCeeeeeecccccCc--HHHHHHHHHcCCEEEEeccccCC
Confidence 899999999999999999999999999999998763 4 77999999999874 68999999999999999999999
Q ss_pred cCC
Q 025500 217 FFG 219 (252)
Q Consensus 217 ~L~ 219 (252)
.|+
T Consensus 226 ~l~ 228 (326)
T 3buv_A 226 RNP 228 (326)
T ss_dssp CCT
T ss_pred ccc
Confidence 986
|
| >2wzm_A Aldo-keto reductase; oxidoreductase; HET: NA7; 1.64A {Mycobacterium smegmatis} PDB: 2wzt_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-48 Score=336.16 Aligned_cols=191 Identities=26% Similarity=0.414 Sum_probs=174.0
Q ss_pred cccCceecCCCCccccceeecccccCCCCCCCCCHHHHHHHHHHHHHCCCCEEeCcCCcCCCcHHHHHHHHHhc--CCCC
Q 025500 6 HQVPRVKLGTQGLEVSKLGYGCMNLSGGYSSPVSEEDGISMIKHAFSKGITFFDTADVYGQNANEVLLGKALKQ--LPRE 83 (252)
Q Consensus 6 ~~m~~~~lg~~g~~vs~lglG~~~~g~~~~~~~~~~~~~~~l~~A~~~Gin~~Dta~~Yg~g~se~~ig~~l~~--~~R~ 83 (252)
+.|++++| ++|++||+||||||+++ .+++.++++.|++.|||+||||+.|| +|+.+|++|+. .+|+
T Consensus 9 ~~m~~~~l-~~g~~v~~lglGt~~~~--------~~~~~~~v~~Al~~Gi~~iDTA~~Yg---~E~~lG~al~~~~~~R~ 76 (283)
T 2wzm_A 9 AAIPTVTL-NDDNTLPVVGIGVGELS--------DSEAERSVSAALEAGYRLIDTAAAYG---NEAAVGRAIAASGIPRD 76 (283)
T ss_dssp -CCCEEEC-TTSCEEESEEEECTTCC--------HHHHHHHHHHHHHHTCCEEECCGGGT---CHHHHHHHHHHTCCCGG
T ss_pred CCCceEEC-CCCCEEcceeEECCCCC--------hHHHHHHHHHHHHcCCCEEECCCccc---CHHHHHHHHHhcCCCcc
Confidence 46999999 99999999999999863 48899999999999999999999999 69999999995 5899
Q ss_pred CEEEEeccCccCCCCcccccCCChHHHHHHHHHHHHHcCCCcccEEEccCCCCC-CCHHHHHHHHHHHHHcCCccEEEcc
Q 025500 84 KIQVATKFGIAGIGVAGVIVKGAPDYVRSCCEASLKRLDVDYIDLYYQHRVDTS-VPIEETIGEMKKLVEEGKIKYIGLS 162 (252)
Q Consensus 84 ~~~i~tK~~~~~~~~~~~~~~~~~~~i~~~~~~sL~~Lg~d~iDl~~lh~~~~~-~~~~~~~~~L~~l~~~G~ir~iGvs 162 (252)
++||+||++... .+++.+++++++||+|||+||||+|++|||+.. .+..++|++|++|+++|+||+||||
T Consensus 77 ~v~i~TK~~~~~---------~~~~~v~~~~~~SL~rL~~dyiDl~llH~p~~~~~~~~e~~~al~~l~~~Gkir~iGvS 147 (283)
T 2wzm_A 77 EIYVTTKLATPD---------QGFTSSQAAARASLERLGLDYVDLYLIHWPGGDTSKYVDSWGGLMKVKEDGIARSIGVC 147 (283)
T ss_dssp GCEEEEEECGGG---------CSHHHHHHHHHHHHHHHTCSCEEEEEECCCTTCHHHHHHHHHHHHHHHHTTSEEEEEEE
T ss_pred cEEEEeccCCCC---------CCHHHHHHHHHHHHHHhCCCCEeEEEEcCCCCCCCCHHHHHHHHHHHHHcCCccEEEEc
Confidence 999999997532 579999999999999999999999999999864 3577999999999999999999999
Q ss_pred CCCHHHHHHHhhc--CCceEEeeecCccccchhhhHHHHHHHhCCeEEecccCccccCC
Q 025500 163 EASPGTIRRAHAV--HPITAVQMEWSLWTRDIEEEIIPLCRELGIGIVPYSPLGRGFFG 219 (252)
Q Consensus 163 ~~~~~~l~~~~~~--~~~~~~q~~~~~~~~~~~~~l~~~~~~~gi~v~a~spl~~G~L~ 219 (252)
||+.++++++++. .+++++|++||++.+. .+++++|+++||+|++|+||++|.|.
T Consensus 148 n~~~~~l~~~~~~~~~~p~~~Q~~~~~~~~~--~~l~~~~~~~gi~v~a~spl~~G~l~ 204 (283)
T 2wzm_A 148 NFGAEDLETIVSLTYFTPAVNQIELHPLLNQ--AALREVNAGYNIVTEAYGPLGVGRLL 204 (283)
T ss_dssp SCCHHHHHHHHHHHCCCCSEEEEECBTTBCC--HHHHHHHHHTTCEEEEECTTTTTGGG
T ss_pred CCCHHHHHHHHHhcCCCcccccccCCcccCC--HHHHHHHHHCCCEEEEecCCCCCccc
Confidence 9999999999875 4679999999999885 57999999999999999999999654
|
| >4f40_A Prostaglandin F2-alpha synthase/D-arabinose dehyd; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: CIT; 1.60A {Leishmania major} PDB: 4g5d_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-48 Score=336.23 Aligned_cols=219 Identities=23% Similarity=0.334 Sum_probs=185.9
Q ss_pred cCceecCCCCccccceeecccccCCCCCCCCCHHHHHHHHHHHHHCCCCEEeCcCCcCCCcHHHHHHHHHhc--CCCCCE
Q 025500 8 VPRVKLGTQGLEVSKLGYGCMNLSGGYSSPVSEEDGISMIKHAFSKGITFFDTADVYGQNANEVLLGKALKQ--LPREKI 85 (252)
Q Consensus 8 m~~~~lg~~g~~vs~lglG~~~~g~~~~~~~~~~~~~~~l~~A~~~Gin~~Dta~~Yg~g~se~~ig~~l~~--~~R~~~ 85 (252)
.++.+| ++|++||+||||||+++. .+++.++++.|++.|||+||||+.|| +|+.+|++|+. .+|+++
T Consensus 10 ~~~~~l-~~g~~v~~lglGt~~~~~-------~~~~~~~v~~Al~~G~~~~DTA~~Yg---~E~~vG~al~~~~~~R~~~ 78 (288)
T 4f40_A 10 KAMVTL-SNGVKMPQFGLGVWQSPA-------GEVTENAVKWALCAGYRHIDTAAIYK---NEESVGAGLRASGVPREDV 78 (288)
T ss_dssp TCEEEC-TTSCEEESBCEECTTCCT-------THHHHHHHHHHHHTTCCEEECCGGGT---CHHHHHHHHHHHTCCGGGC
T ss_pred CCeEEC-CCCCeecceeEECCcCCC-------cHHHHHHHHHHHHcCCCeEECccccc---CHHHHHHHHHhcCCChhhE
Confidence 567888 899999999999999863 38899999999999999999999999 79999999996 689999
Q ss_pred EEEeccCccCCCCcccccCCChHHHHHHHHHHHHHcCCCcccEEEccCCCCC-------CCHHHHHHHHHHHHHcCCccE
Q 025500 86 QVATKFGIAGIGVAGVIVKGAPDYVRSCCEASLKRLDVDYIDLYYQHRVDTS-------VPIEETIGEMKKLVEEGKIKY 158 (252)
Q Consensus 86 ~i~tK~~~~~~~~~~~~~~~~~~~i~~~~~~sL~~Lg~d~iDl~~lh~~~~~-------~~~~~~~~~L~~l~~~G~ir~ 158 (252)
||+||++... .+++.+++++++||+|||+||||+|++|||+.. .+..++|++|++|+++|+||+
T Consensus 79 ~I~TK~~~~~---------~~~~~i~~~~~~SL~rLg~dyiDl~llH~p~~~~~~~~~~~~~~e~~~al~~l~~~Gkir~ 149 (288)
T 4f40_A 79 FITTKLWNTE---------QGYESTLAAFEESRQKLGVDYIDLYLIHWPRGKDILSKEGKKYLDSWRAFEQLYKEKKVRA 149 (288)
T ss_dssp EEEEEECGGG---------CSHHHHHHHHHHHHHHHTCSCEEEEEECCCCCHHHHHHHCCHHHHHHHHHHHHHHTTSEEE
T ss_pred EEEEecCCCc---------CCHHHHHHHHHHHHHHhCCCcEEEEEEecCCCCcccccccccHHHHHHHHHHHHHcCCccE
Confidence 9999998643 578999999999999999999999999999853 457899999999999999999
Q ss_pred EEccCCCHHHHHHHhhc--CCceEEeeecCccccchhhhHHHHHHHhCCeEEecccCccccCCCCCCC------CCCCCC
Q 025500 159 IGLSEASPGTIRRAHAV--HPITAVQMEWSLWTRDIEEEIIPLCRELGIGIVPYSPLGRGFFGGKAVV------ENVPAD 230 (252)
Q Consensus 159 iGvs~~~~~~l~~~~~~--~~~~~~q~~~~~~~~~~~~~l~~~~~~~gi~v~a~spl~~G~L~~~~~~------~~~~~~ 230 (252)
||||||+.++++++.+. .+++++|++||++.+. .+++++|+++||+|++|+||++|.|++.... ....+.
T Consensus 150 iGvSn~~~~~l~~~~~~~~~~~~~~Q~~~~~~~~~--~~l~~~~~~~gi~v~a~spl~~G~l~~~~~l~~ia~~~g~t~a 227 (288)
T 4f40_A 150 IGVSNFHIHHLEDVLAMCTVTPMVNQVELHPLNNQ--ADLRAFCDAKQIKVEAWSPLGQGKLLSNPILSAIGAKYNKTAA 227 (288)
T ss_dssp EEEESCCHHHHHHHHTTCSSCCCEEEEECBTTBCC--HHHHHHHHHTTCEEEEESTTC--CGGGCHHHHHHHHHHTCCHH
T ss_pred EEeccCCHHHHHHHHHhCCCCCeEEeccCccccCC--HHHHHHHHHCCCEEEEecCCCCCcccccHHHHHHHHHhCCCHH
Confidence 99999999999999875 4689999999999985 6899999999999999999999988764211 112222
Q ss_pred ----ccccccCCccccccCccccc
Q 025500 231 ----SFLVLFSVNVYPHHFVSSVS 250 (252)
Q Consensus 231 ----~~~~~~~~~~~~~~~~~~~~ 250 (252)
.|++.+. ..++||.++++
T Consensus 228 qvaL~w~l~~~--~~~i~g~~~~~ 249 (288)
T 4f40_A 228 QVILRWNIQKN--LITIPKSVHRE 249 (288)
T ss_dssp HHHHHHHHHTT--CEECCBCSSHH
T ss_pred HHHHHHHHhCC--CeEeeCCCCHH
Confidence 2333333 66778877764
|
| >1s1p_A Aldo-keto reductase family 1 member C3; TIM-barrel, oxidoreductase; HET: NAP; 1.20A {Homo sapiens} SCOP: c.1.7.1 PDB: 1s1r_A* 1s2a_A* 1s2c_A* 3uwe_A* 3r58_A* 3r43_A* 3r7m_A* 3r6i_A* 3r8h_A* 3r94_A* 3r8g_A* 1zq5_A* 1ry8_A* 1xf0_A* 1ry0_A* 2f38_A* 2fgb_A* 4dbs_A* 4dbu_A* 3gug_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=3.3e-48 Score=341.12 Aligned_cols=196 Identities=27% Similarity=0.380 Sum_probs=174.4
Q ss_pred ccccCceecCCCCccccceeecccccCCCCCCCCCHHHHHHHHHHHHHCCCCEEeCcCCcCCCcHHHHHHHHHhc-----
Q 025500 5 KHQVPRVKLGTQGLEVSKLGYGCMNLSGGYSSPVSEEDGISMIKHAFSKGITFFDTADVYGQNANEVLLGKALKQ----- 79 (252)
Q Consensus 5 ~~~m~~~~lg~~g~~vs~lglG~~~~g~~~~~~~~~~~~~~~l~~A~~~Gin~~Dta~~Yg~g~se~~ig~~l~~----- 79 (252)
.|++++++| ++|+.||+||||||.++. .+.+++.++++.|++.|||+||||+.|| +|+.+|++|+.
T Consensus 2 ~~~~~~~~L-~tg~~v~~lglGt~~~~~-----~~~~~~~~~l~~Al~~G~~~iDTA~~Yg---~E~~vG~al~~~~~~~ 72 (331)
T 1s1p_A 2 DSKQQCVKL-NDGHFMPVLGFGTYAPPE-----VPRSKALEVTKLAIEAGFRHIDSAHLYN---NEEQVGLAIRSKIADG 72 (331)
T ss_dssp ----CEEEC-TTSCEEESEEEECCCCTT-----SCTTHHHHHHHHHHHHTCCEEECCGGGT---CHHHHHHHHHHHHHTT
T ss_pred CCCCCeEEC-CCCCEeCCeeEcCccCCC-----CCHHHHHHHHHHHHHcCCCEEEcccccc---CHHHHHHHHHHHHhcC
Confidence 367889999 899999999999998752 3668899999999999999999999999 69999999985
Q ss_pred -CCCCCEEEEeccCccCCCCcccccCCChHHHHHHHHHHHHHcCCCcccEEEccCCCC-------------------CCC
Q 025500 80 -LPREKIQVATKFGIAGIGVAGVIVKGAPDYVRSCCEASLKRLDVDYIDLYYQHRVDT-------------------SVP 139 (252)
Q Consensus 80 -~~R~~~~i~tK~~~~~~~~~~~~~~~~~~~i~~~~~~sL~~Lg~d~iDl~~lh~~~~-------------------~~~ 139 (252)
++|+++||+||++... .+++.+++++++||+|||+||||+|++|||+. ..+
T Consensus 73 ~~~R~~~~I~TK~~~~~---------~~~~~v~~~~e~SL~rLg~dyiDl~llH~p~~~~~~~~~~~~d~~g~~~~~~~~ 143 (331)
T 1s1p_A 73 SVKREDIFYTSKLWSTF---------HRPELVRPALENSLKKAQLDYVDLYLIHSPMSLKPGEELSPTDENGKVIFDIVD 143 (331)
T ss_dssp SCCGGGCEEEEEECGGG---------CSHHHHHHHHHHHHHHHTCSCEEEEEECCSCCBCCSSCSSCBCTTSCBCBCCCC
T ss_pred CCCchheEEEeccCCcc---------CCHHHHHHHHHHHHHHhCCCcEEEEEeccCcccCCCcccCCccccccccccccC
Confidence 5899999999997533 57999999999999999999999999999942 125
Q ss_pred HHHHHHHHHHHHHcCCccEEEccCCCHHHHHHHhhcC----CceEEeeecCccccchhhhHHHHHHHhCCeEEecccCcc
Q 025500 140 IEETIGEMKKLVEEGKIKYIGLSEASPGTIRRAHAVH----PITAVQMEWSLWTRDIEEEIIPLCRELGIGIVPYSPLGR 215 (252)
Q Consensus 140 ~~~~~~~L~~l~~~G~ir~iGvs~~~~~~l~~~~~~~----~~~~~q~~~~~~~~~~~~~l~~~~~~~gi~v~a~spl~~ 215 (252)
.+++|++|++|+++|+||+||||||+.++++++++.. +|+++|++||++.+. .+++++|+++||+|++|+||++
T Consensus 144 ~~e~~~ale~l~~~Gkir~iGvSn~~~~~l~~~~~~~~~~~~p~v~Q~~~~~~~~~--~~l~~~~~~~gI~v~a~spL~~ 221 (331)
T 1s1p_A 144 LCTTWEAMEKCKDAGLAKSIGVSNFNRRQLEMILNKPGLKYKPVCNQVECHPYFNR--SKLLDFCKSKDIVLVAYSALGS 221 (331)
T ss_dssp HHHHHHHHHHHHHTTSEEEEEEESCCHHHHHHHHTCTTCCCCCSEEEEECBTTBCC--HHHHHHHHHTTCEEEEESTTSC
T ss_pred HHHHHHHHHHHHHcCCccEEEEeCCCHHHHHHHHHhcCccCCCceeeeecCCCcCh--HHHHHHHHHcCCEEEEeccccC
Confidence 7899999999999999999999999999999998763 679999999999875 6899999999999999999999
Q ss_pred ccCCC
Q 025500 216 GFFGG 220 (252)
Q Consensus 216 G~L~~ 220 (252)
|.|++
T Consensus 222 G~l~~ 226 (331)
T 1s1p_A 222 QRDKR 226 (331)
T ss_dssp CCCTT
T ss_pred Ccccc
Confidence 99875
|
| >1gve_A Aflatoxin B1 aldehyde reductase member 3; oxidoreductase, aldo-keto reductase, succinic semialdehyde oxidoreductase, AKR7 family; HET: NAP CIT; 1.38A {Rattus norvegicus} SCOP: c.1.7.1 PDB: 2clp_A* 2c91_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.1e-48 Score=340.04 Aligned_cols=194 Identities=28% Similarity=0.367 Sum_probs=175.9
Q ss_pred cccceeecccccCCCCCCCCCHHHHHHHHHHHHHCCCCEEeCcCCcCCCcHHHHHHHHHhc--CCCCCEEEEeccCccCC
Q 025500 19 EVSKLGYGCMNLSGGYSSPVSEEDGISMIKHAFSKGITFFDTADVYGQNANEVLLGKALKQ--LPREKIQVATKFGIAGI 96 (252)
Q Consensus 19 ~vs~lglG~~~~g~~~~~~~~~~~~~~~l~~A~~~Gin~~Dta~~Yg~g~se~~ig~~l~~--~~R~~~~i~tK~~~~~~ 96 (252)
.+|+||||||++|+. .+.+++.++|+.|+++|||+||||+.||.|.+|+.+|++|+. ..|++++|+||++...
T Consensus 4 ~~~~lglGt~~~g~~----~~~~~~~~~l~~Al~~Gi~~~DTA~~Yg~G~sE~~lG~al~~~~~~r~~~~i~TK~~~~~- 78 (327)
T 1gve_A 4 ARPATVLGAMEMGRR----MDVTSSSASVRAFLQRGHTEIDTAFVYANGQSETILGDLGLGLGRSGCKVKIATKAAPMF- 78 (327)
T ss_dssp CCCEEEEECTTBTTT----BCHHHHHHHHHHHHHTTCCEEECCTTGGGGHHHHHHTTSCCCTTSTTCCSEEEEEECSCT-
T ss_pred CCCCeEEcccccCCC----CCHHHHHHHHHHHHHcCCCEEEchhhcCCCchHHHHHHHHhhcCCCCCeEEEEEEECCCC-
Confidence 468999999998751 478999999999999999999999999999999999999985 3478899999996432
Q ss_pred CCcccccCCChHHHHHHHHHHHHHcCCCcccEEEccCCCCCCCHHHHHHHHHHHHHcCCccEEEccCCCHHHHHHHhhc-
Q 025500 97 GVAGVIVKGAPDYVRSCCEASLKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPGTIRRAHAV- 175 (252)
Q Consensus 97 ~~~~~~~~~~~~~i~~~~~~sL~~Lg~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~G~ir~iGvs~~~~~~l~~~~~~- 175 (252)
..+.+++.+++++++||+|||+||||+|++|||+...+++++|++|++|+++|+||+||||||+.++++++.+.
T Consensus 79 -----~~~~~~~~i~~~~~~SL~rL~~dyiDl~~lH~p~~~~~~~e~~~al~~l~~~Gkir~iGvSn~~~~~l~~~~~~~ 153 (327)
T 1gve_A 79 -----GKTLKPADVRFQLETSLKRLQCPRVDLFYLHFPDHGTPIEETLQACHQLHQEGKFVELGLSNYVSWEVAEICTLC 153 (327)
T ss_dssp -----TCCSSHHHHHHHHHHHHHHTTCSCEEEEEECSCCTTSCHHHHHHHHHHHHHTTSEEEEEEESCCHHHHHHHHHHH
T ss_pred -----CCCCCHHHHHHHHHHHHHHHCCCeEeEEEecCCCCCCCHHHHHHHHHHHHhCCceeEEEecCCCHHHHHHHHHHH
Confidence 11468999999999999999999999999999998888999999999999999999999999999999887654
Q ss_pred -----CCceEEeeecCccccchhhhHHHHHHHhCCeEEecccCccccCCCCC
Q 025500 176 -----HPITAVQMEWSLWTRDIEEEIIPLCRELGIGIVPYSPLGRGFFGGKA 222 (252)
Q Consensus 176 -----~~~~~~q~~~~~~~~~~~~~l~~~~~~~gi~v~a~spl~~G~L~~~~ 222 (252)
.+++++|++||++++..+.+++++|+++||+|++|+||++|+|++++
T Consensus 154 ~~~g~~~~~~~Q~~~~~~~~~~e~~l~~~~~~~gi~v~a~spL~~G~Ltg~~ 205 (327)
T 1gve_A 154 KKNGWIMPTVYQGMYNAITRQVETELFPCLRHFGLRFYAFNPLAGGLLTGRY 205 (327)
T ss_dssp HHHTCCCEEEEEEECBTTBCGGGTTHHHHHHHHTCEEEEECTTGGGGGGTCC
T ss_pred HHcCCCCeEEEeccCcceecccHHHHHHHHHHcCCeEEEecccccccccCcc
Confidence 57899999999999987788999999999999999999999999874
|
| >4gie_A Prostaglandin F synthase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: NAP; 1.25A {Trypanosoma cruzi} PDB: 4fzi_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.5e-48 Score=335.09 Aligned_cols=220 Identities=23% Similarity=0.334 Sum_probs=187.7
Q ss_pred cccCceecCCCCccccceeecccccCCCCCCCCCHHHHHHHHHHHHHCCCCEEeCcCCcCCCcHHHHHHHHHhc--CCCC
Q 025500 6 HQVPRVKLGTQGLEVSKLGYGCMNLSGGYSSPVSEEDGISMIKHAFSKGITFFDTADVYGQNANEVLLGKALKQ--LPRE 83 (252)
Q Consensus 6 ~~m~~~~lg~~g~~vs~lglG~~~~g~~~~~~~~~~~~~~~l~~A~~~Gin~~Dta~~Yg~g~se~~ig~~l~~--~~R~ 83 (252)
.+|+|++| +||++||.||||||+++ +.+++.+++++|+++||||||||+.|| +|+.+|++++. .+|+
T Consensus 11 ~~~~~v~L-n~G~~ip~lGlGtw~~~-------d~~e~~~~v~~Al~~Gin~~DTA~~Yg---sE~~vG~~l~~~~~~r~ 79 (290)
T 4gie_A 11 CNYNCVTL-HNSVRMPQLGLGVWRAQ-------DGAETANAVRWAIEAGYRHIDTAYIYS---NERGVGQGIRESGVPRE 79 (290)
T ss_dssp SSSCEEEC-TTSCEEESBCEECTTCC-------TTHHHHHHHHHHHHHTCCEEECCGGGT---CHHHHHHHHHHHCCCGG
T ss_pred CCCCEEEc-CCCCCccceeEECCCCC-------CHHHHHHHHHHHHHcCCCEEecccccC---CHHHHHHHHHhcCCcch
Confidence 57999999 99999999999999864 468899999999999999999999999 89999999997 7899
Q ss_pred CEEEEeccCccCCCCcccccCCChHHHHHHHHHHHHHcCCCcccEEEccCCCCCCCHHHHHHHHHHHHHcCCccEEEccC
Q 025500 84 KIQVATKFGIAGIGVAGVIVKGAPDYVRSCCEASLKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSE 163 (252)
Q Consensus 84 ~~~i~tK~~~~~~~~~~~~~~~~~~~i~~~~~~sL~~Lg~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~G~ir~iGvs~ 163 (252)
+++|+||++... .+++.+.+++++||+|||+||||+|++|||+. .+..++|++|++|+++||||+|||||
T Consensus 80 ~~~i~tk~~~~~---------~~~~~~~~~~e~SL~rL~~dyiDly~lH~p~~-~~~~e~~~al~~l~~~Gkir~iGvSn 149 (290)
T 4gie_A 80 EVWVTTKVWNSD---------QGYEKTLAAFERSRELLGLEYIDLYLIHWPGK-KKFVDTWKALEKLYEEKKVRAIGVSN 149 (290)
T ss_dssp GSEEEEEECGGG---------CSHHHHHHHHHHHHHHHTCSCEEEEEECCCCS-SSHHHHHHHHHHHHHTTSEEEEEEES
T ss_pred hccccccccccC---------CChHHHHHHHHHHHHHhCCCceeeEEecCCCC-CcchHHHHHHHHHHHCCCcceeeecC
Confidence 999999998654 57899999999999999999999999999976 46789999999999999999999999
Q ss_pred CCHHHHHHHhhcC--CceEEeeecCccccchhhhHHHHHHHhCCeEEecccCccccCCCCCCCC---------CCCC---
Q 025500 164 ASPGTIRRAHAVH--PITAVQMEWSLWTRDIEEEIIPLCRELGIGIVPYSPLGRGFFGGKAVVE---------NVPA--- 229 (252)
Q Consensus 164 ~~~~~l~~~~~~~--~~~~~q~~~~~~~~~~~~~l~~~~~~~gi~v~a~spl~~G~L~~~~~~~---------~~~~--- 229 (252)
|+.+++.++.... .+.++|+++++..+ +.+++++|+++||++++|+||++|.|++..... ...+
T Consensus 150 ~~~~~l~~~~~~~~~~~~~~q~~~~~~~~--~~~l~~~~~~~gi~~~a~spl~~G~l~~~~~~~~l~~iA~~~g~t~aqv 227 (290)
T 4gie_A 150 FEPHHLTELFKSCKIRPMVNQVELHPLFQ--QRTLREFCKQHNIAITAWSPLGSGEEAGILKNHVLGEIAKKHNKSPAQV 227 (290)
T ss_dssp CCHHHHHHHHTTCSSCCSEEEEECBTTBC--CHHHHHHHHHTTCEEEEESTTCSSGGGCGGGCHHHHHHHHHHTCCHHHH
T ss_pred CCHHHHHHHHHhccCCCceeeEeccccch--hHHHHHHHHHcCceEeeecccccccccccchhHHHHHHHHHhCCCHHHH
Confidence 9999999998764 45677777776655 478999999999999999999999998763321 1122
Q ss_pred -CccccccCCccccccCccccc
Q 025500 230 -DSFLVLFSVNVYPHHFVSSVS 250 (252)
Q Consensus 230 -~~~~~~~~~~~~~~~~~~~~~ 250 (252)
-.|++.+. ..++||+++++
T Consensus 228 aL~w~l~~~--~v~I~G~~~~~ 247 (290)
T 4gie_A 228 VIRWDIQHG--IVTIPKSTNKG 247 (290)
T ss_dssp HHHHHHHTT--CEECCBCCSHH
T ss_pred HHHHHHhCC--CEEEECCCCHH
Confidence 22333333 55788888764
|
| >1zgd_A Chalcone reductase; polyketide, deoxychalcone, isoflavonoid, biosynthesis, plant protein; HET: NAP; 1.70A {Medicago sativa} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.9e-48 Score=338.90 Aligned_cols=194 Identities=28% Similarity=0.423 Sum_probs=173.6
Q ss_pred ccCcee-cCC-CCccccceeecccccCCCCCCCCCHHHHHHHHHHHHHCCCCEEeCcCCcCCCcHHHHHHHHHhc-----
Q 025500 7 QVPRVK-LGT-QGLEVSKLGYGCMNLSGGYSSPVSEEDGISMIKHAFSKGITFFDTADVYGQNANEVLLGKALKQ----- 79 (252)
Q Consensus 7 ~m~~~~-lg~-~g~~vs~lglG~~~~g~~~~~~~~~~~~~~~l~~A~~~Gin~~Dta~~Yg~g~se~~ig~~l~~----- 79 (252)
+|++++ ||+ ||++||+|||||+.++. +.+++.++++.|++.|||+||||+.|| +|+.+|++|+.
T Consensus 5 ~m~~~~~l~~~tg~~v~~lglGt~~~~~------~~~~~~~~v~~Al~~G~~~iDTA~~Yg---sE~~vG~al~~~~~~g 75 (312)
T 1zgd_A 5 EIPTKVLTNTSSQLKMPVVGMGSAPDFT------CKKDTKDAIIEAIKQGYRHFDTAAAYG---SEQALGEALKEAIELG 75 (312)
T ss_dssp CCCEEECTTSTTCCEEESBCBCCSCCTT------CCSCHHHHHHHHHHHTCCEEECCGGGT---CHHHHHHHHHHHHHTT
T ss_pred CCchhhhcCCCCCCCCCceeEcCcccCC------CHHHHHHHHHHHHHcCCCEEECccccC---CHHHHHHHHHHHHhcC
Confidence 478999 987 79999999999954332 346789999999999999999999999 79999999986
Q ss_pred -CCCCCEEEEeccCccCCCCcccccCCChHHHHHHHHHHHHHcCCCcccEEEccCCCC----------------CCCHHH
Q 025500 80 -LPREKIQVATKFGIAGIGVAGVIVKGAPDYVRSCCEASLKRLDVDYIDLYYQHRVDT----------------SVPIEE 142 (252)
Q Consensus 80 -~~R~~~~i~tK~~~~~~~~~~~~~~~~~~~i~~~~~~sL~~Lg~d~iDl~~lh~~~~----------------~~~~~~ 142 (252)
++|+++||+||++... .+++.+++++++||+|||+||||+|++|||+. ..+.++
T Consensus 76 ~~~R~~~~i~TK~~~~~---------~~~~~v~~~~~~SL~rL~~dyiDl~llH~p~~~~~~~~~~~~~~~~~~~~~~~e 146 (312)
T 1zgd_A 76 LVTRDDLFVTSKLWVTE---------NHPHLVIPALQKSLKTLQLDYLDLYLIHWPLSSQPGKFSFPIDVADLLPFDVKG 146 (312)
T ss_dssp SCCGGGCEEEEEECGGG---------CSGGGHHHHHHHHHHHHTCSCBSEEEECCSCEECTTCCCSSEEGGGEECCCHHH
T ss_pred CCcchheEEEeccCCCC---------CCHHHHHHHHHHHHHHhCCCceeEEEEeccCcccCccccccccccccccccHHH
Confidence 4899999999997543 57899999999999999999999999999963 246789
Q ss_pred HHHHHHHHHHcCCccEEEccCCCHHHHHHHhhcC--CceEEeeecCccccchhhhHHHHHHHhCCeEEecccCccccCCC
Q 025500 143 TIGEMKKLVEEGKIKYIGLSEASPGTIRRAHAVH--PITAVQMEWSLWTRDIEEEIIPLCRELGIGIVPYSPLGRGFFGG 220 (252)
Q Consensus 143 ~~~~L~~l~~~G~ir~iGvs~~~~~~l~~~~~~~--~~~~~q~~~~~~~~~~~~~l~~~~~~~gi~v~a~spl~~G~L~~ 220 (252)
+|++|++|+++|+||+||||||+.++++++++.. +++++|++||++.+. .+++++|+++||+|++|+||++|.+.+
T Consensus 147 ~~~ale~l~~~Gkir~iGvSn~~~~~l~~~~~~~~~~p~~~Q~~~~~~~~~--~~l~~~~~~~gi~v~a~spl~~G~~~~ 224 (312)
T 1zgd_A 147 VWESMEESLKLGLTKAIGVSNFSVKKLENLLSVATVLPAVNQVEMNLAWQQ--KKLREFCNAHGIVLTAFSPVRKGASRG 224 (312)
T ss_dssp HHHHHHHHHHTTSBSCEEEESCCHHHHHHHHTTCSSCCSEEEEECBTTBCC--HHHHHHHHHTTCEEEEESTTTTTTTTS
T ss_pred HHHHHHHHHHcCCCCEEEEeCCCHHHHHHHHHhCCCCceEEeeecCcccCC--HHHHHHHHHcCCEEEEecCCCCCCCCC
Confidence 9999999999999999999999999999998764 789999999999885 689999999999999999999997554
|
| >3h7u_A Aldo-keto reductase; stress response, NADP, drought tolerance, oxidoreductase; HET: NAP; 1.25A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.1e-48 Score=339.39 Aligned_cols=191 Identities=27% Similarity=0.406 Sum_probs=172.2
Q ss_pred cccccCceecCCCCccccceeecccccCCCCCCCCCHHHHHHHHHHHHHCCCCEEeCcCCcCCCcHHHHHHHHHhc----
Q 025500 4 EKHQVPRVKLGTQGLEVSKLGYGCMNLSGGYSSPVSEEDGISMIKHAFSKGITFFDTADVYGQNANEVLLGKALKQ---- 79 (252)
Q Consensus 4 ~~~~m~~~~lg~~g~~vs~lglG~~~~g~~~~~~~~~~~~~~~l~~A~~~Gin~~Dta~~Yg~g~se~~ig~~l~~---- 79 (252)
|.|+|++++| ++|++||+||||||++ +.+++.++++.|++.|||+||||+.|| +|+.+|++|++
T Consensus 21 ~~~~m~~~~L-~tg~~v~~lglGt~~~--------~~~~~~~~v~~Al~~Gi~~~DTA~~Yg---sE~~lG~al~~~~~~ 88 (335)
T 3h7u_A 21 MANAITFFKL-NTGAKFPSVGLGTWQA--------SPGLVGDAVAAAVKIGYRHIDCAQIYG---NEKEIGAVLKKLFED 88 (335)
T ss_dssp ---CCCEEEC-TTSCEEESBCEECTTC--------CHHHHHHHHHHHHHHTCCEEECCGGGS---CHHHHHHHHHHHHHT
T ss_pred hccCCceEEc-CCCCEecceeEeCCcC--------CHHHHHHHHHHHHHcCCCEEECCcccC---CHHHHHHHHHHHHhc
Confidence 4578999999 4999999999999974 678999999999999999999999999 79999999985
Q ss_pred --CCCCCEEEEeccCccCCCCcccccCCChHHHHHHHHHHHHHcCCCcccEEEccCCCC--------------CCCHHHH
Q 025500 80 --LPREKIQVATKFGIAGIGVAGVIVKGAPDYVRSCCEASLKRLDVDYIDLYYQHRVDT--------------SVPIEET 143 (252)
Q Consensus 80 --~~R~~~~i~tK~~~~~~~~~~~~~~~~~~~i~~~~~~sL~~Lg~d~iDl~~lh~~~~--------------~~~~~~~ 143 (252)
++|+++||+||++... .+++.+++++++||+|||+||||+|++|||+. ..+.+++
T Consensus 89 g~~~R~~v~I~TK~~~~~---------~~~~~v~~~~e~SL~rLg~dyiDl~llH~p~~~~~~~~~~~~~~~~~~~~~e~ 159 (335)
T 3h7u_A 89 RVVKREDLFITSKLWCTD---------HDPQDVPEALNRTLKDLQLEYVDLYLIHWPARIKKGSVGIKPENLLPVDIPST 159 (335)
T ss_dssp TSCCGGGCEEEEEECGGG---------CSTTHHHHHHHHHHHHHTCSCBSEEEECSSCEECSSCSSCCGGGEECCCHHHH
T ss_pred CCCCcceeEEEeeeCCCC---------CCHHHHHHHHHHHHHHcCCCceeEEEEcCCCccccccccccccccccCCHHHH
Confidence 3899999999997543 57899999999999999999999999999963 2467899
Q ss_pred HHHHHHHHHcCCccEEEccCCCHHHHHHHhhc--CCceEEeeecCccccchhhhHHHHHHHhCCeEEecccCcccc
Q 025500 144 IGEMKKLVEEGKIKYIGLSEASPGTIRRAHAV--HPITAVQMEWSLWTRDIEEEIIPLCRELGIGIVPYSPLGRGF 217 (252)
Q Consensus 144 ~~~L~~l~~~G~ir~iGvs~~~~~~l~~~~~~--~~~~~~q~~~~~~~~~~~~~l~~~~~~~gi~v~a~spl~~G~ 217 (252)
|++|++|+++|+||+||||||+.++++++++. .+++++|++||++.+. .+++++|+++||+|++|+||++|.
T Consensus 160 ~~aL~~l~~~Gkir~iGvSn~~~~~l~~~~~~~~~~~~~~Q~~~~~~~~~--~~l~~~~~~~gI~v~a~sPL~~g~ 233 (335)
T 3h7u_A 160 WKAMEALYDSGKARAIGVSNFSTKKLADLLELARVPPAVNQVECHPSWRQ--TKLQEFCKSKGVHLSAYSPLGSPG 233 (335)
T ss_dssp HHHHHHHHHTTSBSSEEEESCCHHHHHHHHHHCSSCCSEEEEECBTTBCC--HHHHHHHHHHTCEEEEESTTCCTT
T ss_pred HHHHHHHHHcCCccEEEecCCCHHHHHHHHHhCCCCeEEEecccccccCC--HHHHHHHHHCCCEEEEeccCcCCC
Confidence 99999999999999999999999999998775 4689999999999885 689999999999999999999763
|
| >1qwk_A Aldose reductase, aldo-keto reductase family 1 member C1, XH961; structural genomics, PSI, protein structure initiative; 1.60A {Caenorhabditis elegans} SCOP: c.1.7.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=8.3e-48 Score=336.72 Aligned_cols=189 Identities=29% Similarity=0.486 Sum_probs=172.9
Q ss_pred cCceecCCCCccccceeecccccCCCCCCCCCHHHHHHHHHHHHHCCCCEEeCcCCcCCCcHHHHHHHHHhc------CC
Q 025500 8 VPRVKLGTQGLEVSKLGYGCMNLSGGYSSPVSEEDGISMIKHAFSKGITFFDTADVYGQNANEVLLGKALKQ------LP 81 (252)
Q Consensus 8 m~~~~lg~~g~~vs~lglG~~~~g~~~~~~~~~~~~~~~l~~A~~~Gin~~Dta~~Yg~g~se~~ig~~l~~------~~ 81 (252)
+++++| ++|++||+||||||++ +.+++.++++.|++.|||+||||+.|| +|+.+|++|+. ++
T Consensus 5 ~~~~~l-~~g~~vs~lglGt~~~--------~~~~~~~~v~~Al~~Gi~~~DTA~~Yg---~E~~vG~al~~~~~~~~~~ 72 (317)
T 1qwk_A 5 TASIKL-SNGVEMPVIGLGTWQS--------SPAEVITAVKTAVKAGYRLIDTASVYQ---NEEAIGTAIKELLEEGVVK 72 (317)
T ss_dssp CCEEEC-TTSCEEESBCEECTTC--------CHHHHHHHHHHHHHHTCCEEECCGGGT---CHHHHHHHHHHHHHHTSCC
T ss_pred cceEEC-CCCCEeCCeeEECCcC--------CHHHHHHHHHHHHHcCCCEEEcccccc---CHHHHHHHHHHHhhcCCCC
Confidence 378899 7999999999999974 678999999999999999999999999 69999999986 58
Q ss_pred CCCEEEEeccCccCCCCcccccCCChHHHHHHHHHHHHHcCCCcccEEEccCCCC---------CCCHHHHHHHHHHHHH
Q 025500 82 REKIQVATKFGIAGIGVAGVIVKGAPDYVRSCCEASLKRLDVDYIDLYYQHRVDT---------SVPIEETIGEMKKLVE 152 (252)
Q Consensus 82 R~~~~i~tK~~~~~~~~~~~~~~~~~~~i~~~~~~sL~~Lg~d~iDl~~lh~~~~---------~~~~~~~~~~L~~l~~ 152 (252)
|+++||+||++... .+++.+++++++||+|||+||||+|++|||+. ..+.+++|++|++|++
T Consensus 73 R~~~~i~TK~~~~~---------~~~~~i~~~~~~SL~rL~~dyiDl~~lH~p~~~~~~~~~~~~~~~~e~~~al~~l~~ 143 (317)
T 1qwk_A 73 REELFITTKAWTHE---------LAPGKLEGGLRESLKKLQLEYVDLYLAHMPAAFNDDMSEHIASPVEDVWRQFDAVYK 143 (317)
T ss_dssp GGGCEEEEEECTTT---------SSTTTHHHHHHHHHHHHTCSCBSEEEESCSCEECTTSCSEECCCHHHHHHHHHHHHH
T ss_pred hhheEEEeeeCCCc---------CCHHHHHHHHHHHHHHhCCCceeEEEEeccCccccccccccCCCHHHHHHHHHHHHH
Confidence 99999999997533 56889999999999999999999999999974 3468899999999999
Q ss_pred cCCccEEEccCCCHHHHHHHhhc--CCceEEeeecCccccchhhhHHHHHHHhCCeEEecccCccccCC
Q 025500 153 EGKIKYIGLSEASPGTIRRAHAV--HPITAVQMEWSLWTRDIEEEIIPLCRELGIGIVPYSPLGRGFFG 219 (252)
Q Consensus 153 ~G~ir~iGvs~~~~~~l~~~~~~--~~~~~~q~~~~~~~~~~~~~l~~~~~~~gi~v~a~spl~~G~L~ 219 (252)
+|+||+||||||+.++++++++. .+++++|++||++.+. .+++++|+++||+|++|+||++|.|+
T Consensus 144 ~Gkir~iGvSn~~~~~l~~~~~~~~~~~~~~Q~~~~~~~~~--~~l~~~~~~~gI~v~a~spL~~G~l~ 210 (317)
T 1qwk_A 144 AGLAKAVGVSNWNNDQISRALALGLTPVHNSQVELHLYFPQ--HDHVDFCKKHNISVTSYATLGSPGRV 210 (317)
T ss_dssp TTSBSSEEEESCCHHHHHHHHTTCSSCCCEEEEECBTTBCC--HHHHHHHHHTTCEEEEESTTCSCCEE
T ss_pred cCCeeEEEecCCCHHHHHHHHHhcCCccceecceeccccCc--HHHHHHHHHcCCEEEEecCccCCCcc
Confidence 99999999999999999999876 3589999999999874 68999999999999999999999875
|
| >1mi3_A Xylose reductase, XR; aldo-keto reductase, beta-alpha barrel, dimer, oxidoreductase; HET: NAD; 1.80A {Candida tenuis} SCOP: c.1.7.1 PDB: 1jez_A* 1k8c_A* 1ye6_A* 1ye4_A* 1sm9_A* 1r38_A* 1z9a_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-47 Score=335.43 Aligned_cols=190 Identities=30% Similarity=0.489 Sum_probs=172.3
Q ss_pred cccCceecCCCCccccceeecccccCCCCCCCCCHHHHHHHHHHHHHCCCCEEeCcCCcCCCcHHHHHHHHHhc------
Q 025500 6 HQVPRVKLGTQGLEVSKLGYGCMNLSGGYSSPVSEEDGISMIKHAFSKGITFFDTADVYGQNANEVLLGKALKQ------ 79 (252)
Q Consensus 6 ~~m~~~~lg~~g~~vs~lglG~~~~g~~~~~~~~~~~~~~~l~~A~~~Gin~~Dta~~Yg~g~se~~ig~~l~~------ 79 (252)
.+|++++| ++|++||+||||||++ +.+++.++++.|++.|||+||||+.|| +|+.+|++|+.
T Consensus 3 ~~m~~~~L-~tg~~v~~lglGt~~~--------~~~~~~~~v~~Al~~G~~~iDTA~~Yg---~E~~vG~al~~~~~~g~ 70 (322)
T 1mi3_A 3 ASIPDIKL-SSGHLMPSIGFGCWKL--------ANATAGEQVYQAIKAGYRLFDGAEDYG---NEKEVGDGVKRAIDEGL 70 (322)
T ss_dssp -CCCEEEC-TTSCEEESBCEECTTC--------CHHHHHHHHHHHHHTTCCEEECCGGGS---CHHHHHHHHHHHHHTTS
T ss_pred CCCceEEC-CCCCEECCeeeeCCcC--------CHHHHHHHHHHHHHcCCCEEEcccccc---CHHHHHHHHHHHhhcCC
Confidence 45899999 8999999999999873 679999999999999999999999999 69999999986
Q ss_pred CCCCCEEEEeccCccCCCCcccccCCChHHHHHHHHHHHHHcCCCcccEEEccCCCC-----------------------
Q 025500 80 LPREKIQVATKFGIAGIGVAGVIVKGAPDYVRSCCEASLKRLDVDYIDLYYQHRVDT----------------------- 136 (252)
Q Consensus 80 ~~R~~~~i~tK~~~~~~~~~~~~~~~~~~~i~~~~~~sL~~Lg~d~iDl~~lh~~~~----------------------- 136 (252)
++|+++||+||++... .+++.+++++++||+|||+||||+|++|||+.
T Consensus 71 ~~R~~~~i~TK~~~~~---------~~~~~v~~~~~~SL~rL~~dyiDl~llH~p~~~~~~~~~~~~~~d~~~~~~~~~~ 141 (322)
T 1mi3_A 71 VKREEIFLTSKLWNNY---------HDPKNVETALNKTLADLKVDYVDLFLIHFPIAFKFVPIEEKYPPGFYCGDGNNFV 141 (322)
T ss_dssp CCGGGCEEEEEECGGG---------CSHHHHHHHHHHHHHHHTCSCEEEEEECCSCCBCCCCTTTCSSCTTCCSSTTCCC
T ss_pred CChhhEEEEEeeCCCC---------CCHHHHHHHHHHHHHHhCCCCeeeEEEecCcccccCccccccccccccccccccc
Confidence 5899999999997533 57999999999999999999999999999942
Q ss_pred --CCCHHHHHHHHHHHHHcCCccEEEccCCCHHHHHHHhhc--CCceEEeeecCccccchhhhHHHHHHHhCCeEEeccc
Q 025500 137 --SVPIEETIGEMKKLVEEGKIKYIGLSEASPGTIRRAHAV--HPITAVQMEWSLWTRDIEEEIIPLCRELGIGIVPYSP 212 (252)
Q Consensus 137 --~~~~~~~~~~L~~l~~~G~ir~iGvs~~~~~~l~~~~~~--~~~~~~q~~~~~~~~~~~~~l~~~~~~~gi~v~a~sp 212 (252)
..+++++|++|++|+++|+||+||||||+.++++++++. .+++++|++||++.+. .+++++|+++||+|++|+|
T Consensus 142 ~~~~~~~e~~~al~~l~~~Gkir~iGvSn~~~~~l~~~~~~~~~~~~~~Q~~~~~~~~~--~~l~~~~~~~gi~v~a~sp 219 (322)
T 1mi3_A 142 YEDVPILETWKALEKLVAAGKIKSIGVSNFPGALLLDLLRGATIKPAVLQVEHHPYLQQ--PKLIEFAQKAGVTITAYSS 219 (322)
T ss_dssp BCCCCHHHHHHHHHHHHHTTSEEEEEEESCCHHHHHHHHHHCSSCCCEEEEECBTTBCC--HHHHHHHHHTTCEEEEECT
T ss_pred ccCCCHHHHHHHHHHHHHcCCcCEEEEcCCCHHHHHHHHHhCCCCceEeecccCcCcCc--HHHHHHHHHcCCEEEEECC
Confidence 125789999999999999999999999999999999876 4689999999999874 6899999999999999999
Q ss_pred CccccC
Q 025500 213 LGRGFF 218 (252)
Q Consensus 213 l~~G~L 218 (252)
|++|.+
T Consensus 220 L~~G~~ 225 (322)
T 1mi3_A 220 FGPQSF 225 (322)
T ss_dssp TTTHHH
T ss_pred CCCCCc
Confidence 999943
|
| >3o3r_A Aldo-keto reductase family 1, member B7; aldose reductase like protein, AKR1B14, oxidoreductase; HET: NAP; 1.86A {Rattus norvegicus} SCOP: c.1.7.1 PDB: 3qkz_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.3e-47 Score=332.79 Aligned_cols=187 Identities=26% Similarity=0.400 Sum_probs=170.0
Q ss_pred cCceecCCCCccccceeecccccCCCCCCCCCHHHHHHHHHHHHHCCCCEEeCcCCcCCCcHHHHHHHHHhc------CC
Q 025500 8 VPRVKLGTQGLEVSKLGYGCMNLSGGYSSPVSEEDGISMIKHAFSKGITFFDTADVYGQNANEVLLGKALKQ------LP 81 (252)
Q Consensus 8 m~~~~lg~~g~~vs~lglG~~~~g~~~~~~~~~~~~~~~l~~A~~~Gin~~Dta~~Yg~g~se~~ig~~l~~------~~ 81 (252)
+++++| +||++||.||||||++ +.+++.++++.|++.|||+||||+.|| +|+.+|++|++ .+
T Consensus 2 ~~~~~l-~tg~~v~~lglGt~~~--------~~~~~~~~l~~Al~~Gi~~~DTA~~Yg---~E~~lG~al~~~~~~~~~~ 69 (316)
T 3o3r_A 2 TTFVKL-RTKAKMPLVGLGTWKS--------PPGQVKEAVKAAIDAGYRHFDCAYVYQ---NESEVGEAIQEKIKEKAVR 69 (316)
T ss_dssp CCEEEC-TTSCEEESBEEBCTTC--------CTTHHHHHHHHHHHTTCCEEECCGGGS---CHHHHHHHHHHHHHTTSCC
T ss_pred CCeEEC-CCCCEeCCeeeECCcC--------CcHHHHHHHHHHHHcCCCEEEccCccC---CHHHHHHHHHHHHhhCCCC
Confidence 456788 8999999999999974 457899999999999999999999999 79999999985 58
Q ss_pred CCCEEEEeccCccCCCCcccccCCChHHHHHHHHHHHHHcCCCcccEEEccCCC-------------------CCCCHHH
Q 025500 82 REKIQVATKFGIAGIGVAGVIVKGAPDYVRSCCEASLKRLDVDYIDLYYQHRVD-------------------TSVPIEE 142 (252)
Q Consensus 82 R~~~~i~tK~~~~~~~~~~~~~~~~~~~i~~~~~~sL~~Lg~d~iDl~~lh~~~-------------------~~~~~~~ 142 (252)
|+++||+||++... .+++.+++++++||+|||+||||+|++|||+ ...+.++
T Consensus 70 R~~v~I~TK~~~~~---------~~~~~i~~~~~~SL~rL~~dyiDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~e 140 (316)
T 3o3r_A 70 REDLFIVSKLWSTF---------FEKSLMKEAFQKTLSDLKLDYLDLYLIHWPQGLQAGKEFLPKDSQGKVLMSKSTFLD 140 (316)
T ss_dssp GGGCEEEEEECGGG---------CSHHHHHHHHHHHHHHHTCSCEEEEEESCSSCBCCSSCSSCBCTTSCBCBCSCCHHH
T ss_pred hHHcEEEeeeCCCc---------CCHHHHHHHHHHHHHHcCCCeeeEEEEcCCccccCcccccccccccccccccccHHH
Confidence 99999999998643 5799999999999999999999999999996 3456889
Q ss_pred HHHHHHHHHHcCCccEEEccCCCHHHHHHHhhcC----CceEEeeecCccccchhhhHHHHHHHhCCeEEecccCcccc
Q 025500 143 TIGEMKKLVEEGKIKYIGLSEASPGTIRRAHAVH----PITAVQMEWSLWTRDIEEEIIPLCRELGIGIVPYSPLGRGF 217 (252)
Q Consensus 143 ~~~~L~~l~~~G~ir~iGvs~~~~~~l~~~~~~~----~~~~~q~~~~~~~~~~~~~l~~~~~~~gi~v~a~spl~~G~ 217 (252)
+|++|++|+++|+||+||||||+.++++++++.. ++.++|++||++.+. .+++++|+++||+|++|+||++|.
T Consensus 141 ~~~al~~l~~~Gkir~iGvSn~~~~~l~~~~~~~~~~~~p~~~Q~~~~~~~~~--~~l~~~~~~~gi~v~a~spL~~G~ 217 (316)
T 3o3r_A 141 AWEGMEELVDQGLVKALGVSNFNHFQIERLLNKPGLKHKPVTNQVECHPYLTQ--EKLIQYCHSKGIAVIAYSPLGSPD 217 (316)
T ss_dssp HHHHHHHHHHTTSEEEEEEESCCHHHHHHHHTCTTCCSCCCEEEEECBTTBCC--HHHHHHHHTTTCEEEEECTTCCTT
T ss_pred HHHHHHHHHHcCCCcEEEEecCCHHHHHHHHHhCCCCCCceEeeccCCcccch--HHHHHHHHHcCCEEEEecccCCCC
Confidence 9999999999999999999999999999998753 489999999998874 789999999999999999999993
|
| >1mzr_A 2,5-diketo-D-gluconate reductase A; alpha/beta-barrel, aldo-ketoreductase, NADPH dependant, BACT targets at IGS-CNRS, france, BIGS; 2.13A {Escherichia coli} SCOP: c.1.7.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=2.8e-47 Score=329.84 Aligned_cols=187 Identities=30% Similarity=0.348 Sum_probs=171.3
Q ss_pred cccCceecCCCCccccceeecccccCCCCCCCCCHHHHHHHHHHHHHCCCCEEeCcCCcCCCcHHHHHHHHHhc--CCCC
Q 025500 6 HQVPRVKLGTQGLEVSKLGYGCMNLSGGYSSPVSEEDGISMIKHAFSKGITFFDTADVYGQNANEVLLGKALKQ--LPRE 83 (252)
Q Consensus 6 ~~m~~~~lg~~g~~vs~lglG~~~~g~~~~~~~~~~~~~~~l~~A~~~Gin~~Dta~~Yg~g~se~~ig~~l~~--~~R~ 83 (252)
+.|++++| ++|+.||+||||||++ +.+++.++++.|++.|||+||||+.|| +|+.+|++|+. .+|+
T Consensus 23 ~~~~~~~L-~tg~~vs~lglGt~~~--------~~~~~~~~l~~Al~~Gi~~~DTA~~Yg---~E~~vG~al~~~~~~R~ 90 (296)
T 1mzr_A 23 ANPTVIKL-QDGNVMPQLGLGVWQA--------SNEEVITAIQKALEVGYRSIDTAAAYK---NEEGVGKALKNASVNRE 90 (296)
T ss_dssp CCCCEEEC-TTSCEEESBCEECCSC--------CHHHHHHHHHHHHHHTCCEEECCGGGT---CHHHHHHHHHHSCSCGG
T ss_pred CCCceEEC-CCCCeeCCEeEECCCC--------CHHHHHHHHHHHHHcCCCEEECCcccc---CHHHHHHHHHhcCCCcc
Confidence 46899999 7999999999999986 368899999999999999999999999 69999999995 5899
Q ss_pred CEEEEeccCccCCCCcccccCCChHHHHHHHHHHHHHcCCCcccEEEccCCCC-CCCHHHHHHHHHHHHHcCCccEEEcc
Q 025500 84 KIQVATKFGIAGIGVAGVIVKGAPDYVRSCCEASLKRLDVDYIDLYYQHRVDT-SVPIEETIGEMKKLVEEGKIKYIGLS 162 (252)
Q Consensus 84 ~~~i~tK~~~~~~~~~~~~~~~~~~~i~~~~~~sL~~Lg~d~iDl~~lh~~~~-~~~~~~~~~~L~~l~~~G~ir~iGvs 162 (252)
++||+||++... . +.+++++++||+|||+||||+|++|||+. ..+..++|++|++|+++|+||+||||
T Consensus 91 ~v~I~TK~~~~~---------~--~~v~~~~e~SL~rLg~dyiDl~llH~p~~~~~~~~e~~~al~~l~~~Gkir~iGvS 159 (296)
T 1mzr_A 91 ELFITTKLWNDD---------H--KRPREALLDSLKKLQLDYIDLYLMHWPVPAIDHYVEAWKGMIELQKEGLIKSIGVC 159 (296)
T ss_dssp GCEEEEEECGGG---------T--TCHHHHHHHHHHHHTCSCEEEEEESCCCTTTCCHHHHHHHHHHHHHTTSEEEEEEE
T ss_pred cEEEEeccCCCc---------H--HHHHHHHHHHHHHhCCCcEEEEEEccCCCCcCCHHHHHHHHHHHHHCCCcCEEEEe
Confidence 999999997532 2 67999999999999999999999999987 46788999999999999999999999
Q ss_pred CCCHHHHHHHhhc--CCceEEeeecCccccchhhhHHHHHHHhCCeEEecccCcccc
Q 025500 163 EASPGTIRRAHAV--HPITAVQMEWSLWTRDIEEEIIPLCRELGIGIVPYSPLGRGF 217 (252)
Q Consensus 163 ~~~~~~l~~~~~~--~~~~~~q~~~~~~~~~~~~~l~~~~~~~gi~v~a~spl~~G~ 217 (252)
||+.++++++.+. .++.++|++||++.+. .+++++|+++||++++|+||++|.
T Consensus 160 n~~~~~l~~~~~~~~~~p~v~Q~~~~~~~~~--~~l~~~~~~~gI~v~a~spL~~G~ 214 (296)
T 1mzr_A 160 NFQIHHLQRLIDETGVTPVINQIELHPLMQQ--RQLHAWNATHKIQTESWSPLAQGG 214 (296)
T ss_dssp SCCHHHHHHHHHHHSCCCSEEEEECBTTBCC--HHHHHHHHHTTCEEEEESTTTTTC
T ss_pred CCCHHHHHHHHHhcCCCceEEeeecccccCC--HHHHHHHHHCCCeEEEeccccCCc
Confidence 9999999998764 5678999999999885 689999999999999999999994
|
| >1us0_A Aldose reductase; oxidoreductase, NADP, IDD594; HET: NDP LDT CIT; 0.66A {Homo sapiens} SCOP: c.1.7.1 PDB: 1pwl_A* 1t41_A* 1pwm_A* 1x96_A* 1x97_A* 1x98_A* 1z89_A* 1z8a_A* 2dux_A* 2duz_A* 2dv0_A* 2fz8_A* 2fz9_A* 2fzb_A* 2fzd_A* 2hv5_A* 2hvn_A* 2hvo_A* 2i16_A* 2i17_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=7.6e-47 Score=330.51 Aligned_cols=187 Identities=28% Similarity=0.436 Sum_probs=170.9
Q ss_pred CceecCCCCccccceeecccccCCCCCCCCCHHHHHHHHHHHHHCCCCEEeCcCCcCCCcHHHHHHHHHhc------CCC
Q 025500 9 PRVKLGTQGLEVSKLGYGCMNLSGGYSSPVSEEDGISMIKHAFSKGITFFDTADVYGQNANEVLLGKALKQ------LPR 82 (252)
Q Consensus 9 ~~~~lg~~g~~vs~lglG~~~~g~~~~~~~~~~~~~~~l~~A~~~Gin~~Dta~~Yg~g~se~~ig~~l~~------~~R 82 (252)
++++| ++|++||+||||||++ +.+++.++++.|++.|||+||||+.|| +|+.+|++|+. ++|
T Consensus 3 ~~~~l-~tg~~v~~lglGt~~~--------~~~~~~~~l~~Al~~G~~~iDTA~~Yg---~E~~vG~al~~~~~~g~~~R 70 (316)
T 1us0_A 3 SRILL-NNGAKMPILGLGTWKS--------PPGQVTEAVKVAIDVGYRHIDCAHVYQ---NENEVGVAIQEKLREQVVKR 70 (316)
T ss_dssp SEEEC-TTSCEEESBCEECTTC--------CHHHHHHHHHHHHHHTCCEEECCGGGT---CHHHHHHHHHHHHHTTSSCG
T ss_pred ceEEC-CCCCEECCEeEECCcC--------CHHHHHHHHHHHHHcCCCEEEcccccC---CHHHHHHHHHHHHhcCCCCh
Confidence 47888 8999999999999873 678999999999999999999999999 69999999985 489
Q ss_pred CCEEEEeccCccCCCCcccccCCChHHHHHHHHHHHHHcCCCcccEEEccCCCC-------------------CCCHHHH
Q 025500 83 EKIQVATKFGIAGIGVAGVIVKGAPDYVRSCCEASLKRLDVDYIDLYYQHRVDT-------------------SVPIEET 143 (252)
Q Consensus 83 ~~~~i~tK~~~~~~~~~~~~~~~~~~~i~~~~~~sL~~Lg~d~iDl~~lh~~~~-------------------~~~~~~~ 143 (252)
+++||+||++... .+++.+++++++||+|||+||||+|++|||+. ..+.+++
T Consensus 71 ~~~~I~TK~~~~~---------~~~~~v~~~~~~SL~rL~~dyiDl~llH~p~~~~~~~~~~~~~~~~~~~~~~~~~~e~ 141 (316)
T 1us0_A 71 EELFIVSKLWCTY---------HEKGLVKGACQKTLSDLKLDYLDLYLIHWPTGFKPGKEFFPLDESGNVVPSDTNILDT 141 (316)
T ss_dssp GGCEEEEEECGGG---------CSHHHHHHHHHHHHHHHTCSCBSEEEESSSCCBCCSSCSSCBCTTSCBCBCSCCHHHH
T ss_pred hHeEEEEeeCCCc---------CCHHHHHHHHHHHHHHhCCCceeeEEEecCccccccccccccccccccccccccHHHH
Confidence 9999999997543 57999999999999999999999999999963 2257899
Q ss_pred HHHHHHHHHcCCccEEEccCCCHHHHHHHhhcC----CceEEeeecCccccchhhhHHHHHHHhCCeEEecccCccccC
Q 025500 144 IGEMKKLVEEGKIKYIGLSEASPGTIRRAHAVH----PITAVQMEWSLWTRDIEEEIIPLCRELGIGIVPYSPLGRGFF 218 (252)
Q Consensus 144 ~~~L~~l~~~G~ir~iGvs~~~~~~l~~~~~~~----~~~~~q~~~~~~~~~~~~~l~~~~~~~gi~v~a~spl~~G~L 218 (252)
|++|++|+++|+||+||||||+.++++++++.. +|+++|++||++.+. .+++++|+++||+|++|+||++|.|
T Consensus 142 ~~ale~l~~~Gkir~iGvSn~~~~~l~~~~~~~~~~~~p~~~Q~~~~~~~~~--~~l~~~~~~~gI~v~a~spL~~G~l 218 (316)
T 1us0_A 142 WAAMEELVDEGLVKAIGISNFNHLQVEMILNKPGLKYKPAVNQIECHPYLTQ--EKLIQYCQSKGIVVTAYSPLGSPDR 218 (316)
T ss_dssp HHHHHHHHHTTSBSCEEEESCCHHHHHHHHTCTTCCSCCSEEEEECBTTBCC--HHHHHHHHHTTCEEEEESTTCCTTC
T ss_pred HHHHHHHHHCCCccEEEEecCCHHHHHHHHHhCcccCCceeeehhcCCccCC--HHHHHHHHHcCCEEEEecccccCcc
Confidence 999999999999999999999999999998763 569999999999874 6899999999999999999999976
|
| >3krb_A Aldose reductase; ssgcid, SBRI, emerald biostructures, university of washingto niaid, oxidoreductase, S genomics; HET: NAP; 1.75A {Giardia lamblia} | Back alignment and structure |
|---|
Probab=100.00 E-value=6e-47 Score=333.40 Aligned_cols=194 Identities=27% Similarity=0.469 Sum_probs=167.5
Q ss_pred cCceecC-CCCccccceeecccccCCCCCCCCCHHHHHHHHHHHHHCCCCEEeCcCCcCCCcHHHHHHHHHh--------
Q 025500 8 VPRVKLG-TQGLEVSKLGYGCMNLSGGYSSPVSEEDGISMIKHAFSKGITFFDTADVYGQNANEVLLGKALK-------- 78 (252)
Q Consensus 8 m~~~~lg-~~g~~vs~lglG~~~~g~~~~~~~~~~~~~~~l~~A~~~Gin~~Dta~~Yg~g~se~~ig~~l~-------- 78 (252)
+.-.++| +||.+||+||||||++ +.+++.++++.|++.|||+||||+.|| +|+.+|++|+
T Consensus 12 ~~~~~~~~~tg~~vp~lGlGt~~~--------~~~~~~~~v~~Al~~Gi~~~DTA~~Yg---sE~~vG~al~~~~~~~~~ 80 (334)
T 3krb_A 12 LEAQTQGPGSMQYPPRLGFGTWQA--------PPEAVQTAVETALMTGYRHIDCAYVYQ---NEEAIGRAFGKIFKDASS 80 (334)
T ss_dssp ---------CCSSCCSBCEECTTC--------CHHHHHHHHHHHHHHTCCEEECCGGGS---CHHHHHHHHHHHHHCTTS
T ss_pred eecCCcCCCCCCccCCeeeeCCCC--------CHHHHHHHHHHHHHcCCCEEECccccc---CHHHHHHHHHHHhhhccC
Confidence 4444443 6799999999999974 679999999999999999999999999 8999999998
Q ss_pred cCCCCCEEEEeccCccCCCCcccccCCChHHHHHHHHHHHHHcCCCcccEEEccCCCC--------------C-------
Q 025500 79 QLPREKIQVATKFGIAGIGVAGVIVKGAPDYVRSCCEASLKRLDVDYIDLYYQHRVDT--------------S------- 137 (252)
Q Consensus 79 ~~~R~~~~i~tK~~~~~~~~~~~~~~~~~~~i~~~~~~sL~~Lg~d~iDl~~lh~~~~--------------~------- 137 (252)
.++|+++||+||++... .+++.+++++++||+|||+||||+|++|||+. .
T Consensus 81 g~~R~~v~I~TK~~~~~---------~~~~~v~~~~e~SL~rLg~dyiDl~llH~p~~~~~~~~~~~~~~d~~g~~~~~~ 151 (334)
T 3krb_A 81 GIKREDVWITSKLWNYN---------HRPELVREQCKKTMSDLQVDYLDLFLVHWPLAFVRNDVGDLFPKDAEGRAMLEK 151 (334)
T ss_dssp SCCGGGCEEEEEECGGG---------CSGGGHHHHHHHHHHHHTCSCEEEEEECCSCCBCCCTTCCSSCBCTTSCBCBCC
T ss_pred CCChhhEEEEeeeCCCC---------CCHHHHHHHHHHHHHHcCCCceeEEEEccccccccccccccCcccccccccccC
Confidence 45899999999998643 57899999999999999999999999999943 1
Q ss_pred CCHHHHHHHHHHHHHcCCccEEEccCCCHHHHHHHhhcC--CceEEeeecCccccchhhhHHHHHHHhCCeEEecccCcc
Q 025500 138 VPIEETIGEMKKLVEEGKIKYIGLSEASPGTIRRAHAVH--PITAVQMEWSLWTRDIEEEIIPLCRELGIGIVPYSPLGR 215 (252)
Q Consensus 138 ~~~~~~~~~L~~l~~~G~ir~iGvs~~~~~~l~~~~~~~--~~~~~q~~~~~~~~~~~~~l~~~~~~~gi~v~a~spl~~ 215 (252)
.+.+++|++|++|+++|+||+||||||+.++++++++.. +++++|++||++.+. .+++++|+++||++++|+||++
T Consensus 152 ~~~~e~~~al~~l~~~Gkir~iGvSn~~~~~l~~~~~~~~~~~~~~Q~~~~~~~~~--~~l~~~c~~~gI~v~ayspL~~ 229 (334)
T 3krb_A 152 VPLADTWRAMEQLVEEGLVKHIGVSNYTVPLLADLLNYAKIKPLVNQIEIHPWHPN--DATVKFCLDNGIGVTAYSPMGG 229 (334)
T ss_dssp CCHHHHHHHHHHHHHHTSEEEEEEESCCHHHHHHHHHHCSSCCSEEEEECBTTBCC--HHHHHHHHHTTCEEEEESTTCC
T ss_pred CCHHHHHHHHHHHHHcCCccEEEEecCCHHHHHHHHHhCCCceEEeeeecCccccc--HHHHHHHHHcCCEEEEEecCCC
Confidence 467899999999999999999999999999999998764 789999999999884 7899999999999999999999
Q ss_pred ccCCCCCC
Q 025500 216 GFFGGKAV 223 (252)
Q Consensus 216 G~L~~~~~ 223 (252)
|+|++++.
T Consensus 230 G~L~~~~~ 237 (334)
T 3krb_A 230 SYADPRDP 237 (334)
T ss_dssp SBC-----
T ss_pred CcccCCCC
Confidence 99998753
|
| >1vp5_A 2,5-diketo-D-gluconic acid reductase; TM1009, structural genomics, joint center for structural genomics, PSI, protein structure initiative; HET: NAP; 2.40A {Thermotoga maritima} SCOP: c.1.7.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=9.8e-47 Score=326.72 Aligned_cols=183 Identities=26% Similarity=0.396 Sum_probs=168.4
Q ss_pred ceecCCCCccccceeecccccCCCCCCCCCHHHHHHHHHHHHHCCCCEEeCcCCcCCCcHHHHHHHHHhc------CCCC
Q 025500 10 RVKLGTQGLEVSKLGYGCMNLSGGYSSPVSEEDGISMIKHAFSKGITFFDTADVYGQNANEVLLGKALKQ------LPRE 83 (252)
Q Consensus 10 ~~~lg~~g~~vs~lglG~~~~g~~~~~~~~~~~~~~~l~~A~~~Gin~~Dta~~Yg~g~se~~ig~~l~~------~~R~ 83 (252)
.+.+|++|++||+||||||++ +.+++.++++.|++.|||+||||+.|| +|+.+|++|+. .+|+
T Consensus 16 ~~~~~~tg~~v~~lglGt~~~--------~~~~~~~~v~~Al~~Gi~~~DTA~~Yg---~E~~vG~al~~~~~~~~~~R~ 84 (298)
T 1vp5_A 16 PKVTLNNGVEMPILGYGVFQI--------PPEKTEECVYEAIKVGYRLIDTAASYM---NEEGVGRAIKRAIDEGIVRRE 84 (298)
T ss_dssp CEEECTTSCEEESBCEECTTC--------CHHHHHHHHHHHHHHTCCEEECCGGGT---CHHHHHHHHHHHHHTTSCCGG
T ss_pred ceEeCCCCCCccCeeEeCCcC--------ChHHHHHHHHHHHHcCCCEEECCCccc---CHHHHHHHHHHhhhccCCChh
Confidence 556789999999999999986 357899999999999999999999999 69999999984 4799
Q ss_pred CEEEEeccCccCCCCcccccCCChHHHHHHHHHHHHHcCCCcccEEEccCCCCCCCHHHHHHHHHHHHHcCCccEEEccC
Q 025500 84 KIQVATKFGIAGIGVAGVIVKGAPDYVRSCCEASLKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSE 163 (252)
Q Consensus 84 ~~~i~tK~~~~~~~~~~~~~~~~~~~i~~~~~~sL~~Lg~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~G~ir~iGvs~ 163 (252)
++||+||++... .+++.+++++++||+|||+||||+|++|||+. +..++|++|++|+++|+||+|||||
T Consensus 85 ~v~I~TK~~~~~---------~~~~~v~~~~~~SL~rLg~dyiDl~llH~p~~--~~~e~~~al~~l~~~Gkir~iGvSn 153 (298)
T 1vp5_A 85 ELFVTTKLWVSD---------VGYESTKKAFEKSLKKLQLEYIDLYLIHQPFG--DVHCAWKAMEEMYKDGLVRAIGVSN 153 (298)
T ss_dssp GCEEEEEECGGG---------CSSHHHHHHHHHHHHHHTCSCEEEEEECSSCS--CHHHHHHHHHHHHHTTSEEEEEEES
T ss_pred hEEEEeccCCCC---------CCHHHHHHHHHHHHHHHCCCcEEEEEecCCCC--CHHHHHHHHHHHHHcCCccEEEecC
Confidence 999999997532 57899999999999999999999999999976 7889999999999999999999999
Q ss_pred CCHHHHHHHhhc--CCceEEeeecCccccchhhhHHHHHHHhCCeEEecccCccc
Q 025500 164 ASPGTIRRAHAV--HPITAVQMEWSLWTRDIEEEIIPLCRELGIGIVPYSPLGRG 216 (252)
Q Consensus 164 ~~~~~l~~~~~~--~~~~~~q~~~~~~~~~~~~~l~~~~~~~gi~v~a~spl~~G 216 (252)
|+.++++++++. .+|+++|++||++.+. .+++++|+++||++++|+||++|
T Consensus 154 ~~~~~l~~~~~~~~~~p~v~Q~~~~~~~~~--~~l~~~~~~~gI~v~a~spL~~G 206 (298)
T 1vp5_A 154 FYPDRLMDLMVHHEIVPAVNQIEIHPFYQR--QEEIEFMRNYNIQPEAWGPFAEG 206 (298)
T ss_dssp CCHHHHHHHHHHCSSCCSEEEEECBTTBCC--HHHHHHHHHTTCEEEEESTTGGG
T ss_pred CCHHHHHHHHHhCCCCceEEEEecccccCC--HHHHHHHHHCCCEEEEecccccC
Confidence 999999999876 3569999999999985 68999999999999999999999
|
| >3h7r_A Aldo-keto reductase; stress response, NADP, drought tolerance, oxidoreductase; HET: NAP; 1.40A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.8e-47 Score=332.95 Aligned_cols=186 Identities=27% Similarity=0.421 Sum_probs=167.4
Q ss_pred cccccCceecCCCCccccceeecccccCCCCCCCCCHHHHHHHHHHHHHCCCCEEeCcCCcCCCcHHHHHHHHHhc----
Q 025500 4 EKHQVPRVKLGTQGLEVSKLGYGCMNLSGGYSSPVSEEDGISMIKHAFSKGITFFDTADVYGQNANEVLLGKALKQ---- 79 (252)
Q Consensus 4 ~~~~m~~~~lg~~g~~vs~lglG~~~~g~~~~~~~~~~~~~~~l~~A~~~Gin~~Dta~~Yg~g~se~~ig~~l~~---- 79 (252)
+.|+|++++| ++|++||+||||||+ ++.++++.|++.|||+||||+.|| +|+.+|++|++
T Consensus 21 ~~~~m~~~~L-~tg~~vs~lglGt~~------------~~~~~v~~Al~~Gi~~~DTA~~Yg---sE~~lG~al~~~~~~ 84 (331)
T 3h7r_A 21 MAAPIRFFEL-NTGAKLPCVGLGTYA------------MVATAIEQAIKIGYRHIDCASIYG---NEKEIGGVLKKLIGD 84 (331)
T ss_dssp ----CCEEEC-TTSCEEESBEEECTT------------CCHHHHHHHHHHTCCEEECCGGGS---CHHHHHHHHHHHHHT
T ss_pred cccCCcEEEC-CCCCEecCEeeccHH------------HHHHHHHHHHHcCCCEEECccccC---CHHHHHHHHHHHhhc
Confidence 4468999999 799999999999985 468999999999999999999999 89999999986
Q ss_pred --CCCCCEEEEeccCccCCCCcccccCCChHHHHHHHHHHHHHcCCCcccEEEccCCCC--------------CCCHHHH
Q 025500 80 --LPREKIQVATKFGIAGIGVAGVIVKGAPDYVRSCCEASLKRLDVDYIDLYYQHRVDT--------------SVPIEET 143 (252)
Q Consensus 80 --~~R~~~~i~tK~~~~~~~~~~~~~~~~~~~i~~~~~~sL~~Lg~d~iDl~~lh~~~~--------------~~~~~~~ 143 (252)
++|+++||+||++... .+++.+++++++||+|||+||||+|++|||+. ..+.+++
T Consensus 85 g~~~R~~v~I~TK~~~~~---------~~~~~i~~~~e~SL~rLg~dyiDl~llH~p~~~~~~~~~~~~~~~~~~~~~e~ 155 (331)
T 3h7r_A 85 GFVKREELFITSKLWSND---------HLPEDVPKALEKTLQDLQIDYVDLYLIHWPASLKKESLMPTPEMLTKPDITST 155 (331)
T ss_dssp TSSCGGGCEEEEEECGGG---------CSTTHHHHHHHHHHHHHTCSCBSEEEECCSCEECTTCSSCCGGGEECCCHHHH
T ss_pred CCCCchhEEEEEeeCCCC---------CCHHHHHHHHHHHHHHcCCCeeEEEEEecCcccccccccccccccccCCHHHH
Confidence 3899999999997543 56899999999999999999999999999964 2467899
Q ss_pred HHHHHHHHHcCCccEEEccCCCHHHHHHHhhc--CCceEEeeecCccccchhhhHHHHHHHhCCeEEecccCccc
Q 025500 144 IGEMKKLVEEGKIKYIGLSEASPGTIRRAHAV--HPITAVQMEWSLWTRDIEEEIIPLCRELGIGIVPYSPLGRG 216 (252)
Q Consensus 144 ~~~L~~l~~~G~ir~iGvs~~~~~~l~~~~~~--~~~~~~q~~~~~~~~~~~~~l~~~~~~~gi~v~a~spl~~G 216 (252)
|++|++|+++|+||+||||||+.++++++++. .+++++|++||++.+. .+++++|+++||+|++|+||++|
T Consensus 156 ~~aL~~l~~~Gkir~iGvSn~~~~~l~~~~~~~~~~~~~~Q~~~~~~~~~--~~l~~~~~~~gI~v~a~spL~~g 228 (331)
T 3h7r_A 156 WKAMEALYDSGKARAIGVSNFSSKKLTDLLNVARVTPAVNQVECHPVWQQ--QGLHELCKSKGVHLSGYSPLGSQ 228 (331)
T ss_dssp HHHHHHHHHTTSBSSEEEESCCHHHHHHHHHHCSSCCSEEEEECBTTBCC--HHHHHHHHHHTCEEEEESTTSCS
T ss_pred HHHHHHHHHcCCCcEEEecCCCHHHHHHHHHhcCCCceeEEeecccccCC--HHHHHHHHHCCCEEEEeCCCCCC
Confidence 99999999999999999999999999998876 4789999999999885 68999999999999999999976
|
| >2bgs_A Aldose reductase; holoenzyme, aldo/keto reductase, oxidoreductase; HET: NDP; 1.64A {Hordeum vulgare} PDB: 2bgq_A* 2vdg_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-46 Score=330.51 Aligned_cols=187 Identities=32% Similarity=0.471 Sum_probs=167.8
Q ss_pred cccC-ceecCCCCccccceeecccccCCCCCCCCCHHHHHHHHHHHHH-CCCCEEeCcCCcCCCcHHHHHHHHHhc----
Q 025500 6 HQVP-RVKLGTQGLEVSKLGYGCMNLSGGYSSPVSEEDGISMIKHAFS-KGITFFDTADVYGQNANEVLLGKALKQ---- 79 (252)
Q Consensus 6 ~~m~-~~~lg~~g~~vs~lglG~~~~g~~~~~~~~~~~~~~~l~~A~~-~Gin~~Dta~~Yg~g~se~~ig~~l~~---- 79 (252)
|+|. +++| ++|+.||+||||||+. + +++.++++.|++ .|||+||||+.|| +|+.+|++|+.
T Consensus 34 ~~m~~~~~L-~tg~~vp~lglGt~~~--------~-~~~~~~l~~Al~~~Gi~~iDTA~~Yg---~E~~vG~al~~~~~~ 100 (344)
T 2bgs_A 34 QGEQDHFVL-KSGHAMPAVGLGTWRA--------G-SDTAHSVRTAITEAGYRHVDTAAEYG---VEKEVGKGLKAAMEA 100 (344)
T ss_dssp ---CCEEEC-TTSCEEESBCEECTTC--------G-GGHHHHHHHHHHTTCCCEEECCGGGT---CHHHHHHHHHHHHHT
T ss_pred ccCCceEEC-CCCCccCCeeEeCCCC--------c-HHHHHHHHHHHHhcCCCEEECCCccC---CHHHHHHHHHHhhhc
Confidence 4564 8888 7999999999999863 5 788999999999 9999999999999 69999999986
Q ss_pred -CCCCCEEEEeccCccCCCCcccccCCChHHHHHHHHHHHHHcCCCcccEEEccCCCC---------------CCCHHHH
Q 025500 80 -LPREKIQVATKFGIAGIGVAGVIVKGAPDYVRSCCEASLKRLDVDYIDLYYQHRVDT---------------SVPIEET 143 (252)
Q Consensus 80 -~~R~~~~i~tK~~~~~~~~~~~~~~~~~~~i~~~~~~sL~~Lg~d~iDl~~lh~~~~---------------~~~~~~~ 143 (252)
.+|+++||+||++... .+++.+++++++||+|||+||||+|++|||+. ..+..++
T Consensus 101 g~~R~~v~I~TK~~~~~---------~~~~~v~~ale~SL~rLg~dyIDl~llH~p~~~~~~~~~~~~~~~~~~~~~~e~ 171 (344)
T 2bgs_A 101 GIDRKDLFVTSKIWCTN---------LAPERVRPALENTLKDLQLDYIDLYHIHWPFRLKDGAHMPPEAGEVLEFDMEGV 171 (344)
T ss_dssp TCCGGGCEEEEEECGGG---------CSHHHHHHHHHHHHHHHTCSCEEEEEESSSCEECTTCCSSCCTTCEECCCHHHH
T ss_pred CCCcccEEEEeccCCCC---------CCHHHHHHHHHHHHHHhCCCcEEEEEEecCCccccccccccccccccCCCHHHH
Confidence 5899999999997533 57999999999999999999999999999962 2367899
Q ss_pred HHHHHHHHHcCCccEEEccCCCHHHHHHHhhc--CCceEEeeecCccccchhhhHHHHHHHhCCeEEecccCccc
Q 025500 144 IGEMKKLVEEGKIKYIGLSEASPGTIRRAHAV--HPITAVQMEWSLWTRDIEEEIIPLCRELGIGIVPYSPLGRG 216 (252)
Q Consensus 144 ~~~L~~l~~~G~ir~iGvs~~~~~~l~~~~~~--~~~~~~q~~~~~~~~~~~~~l~~~~~~~gi~v~a~spl~~G 216 (252)
|++|++|+++|+||+||||||+.++++++++. .+++++|++||++.+. .+++++|+++||+|++|+||++|
T Consensus 172 ~~aLe~l~~~GkIr~iGvSn~~~~~l~~~~~~~~i~p~v~Q~e~~~~~~~--~~ll~~~~~~gI~v~a~spL~~G 244 (344)
T 2bgs_A 172 WKEMENLVKDGLVKDIGVCNYTVTKLNRLLRSAKIPPAVCQMEMHPGWKN--DKIFEACKKHGIHITAYSPLGSS 244 (344)
T ss_dssp HHHHHHHHHTTSEEEEEEESCCHHHHHHHHHHCSSCCSEEEEECBTTBCC--HHHHHHHHHTTCEEEEESTTCTT
T ss_pred HHHHHHHHHcCCccEEEEecCCHHHHHHHHHhcCCCceeeecccCcccCc--HHHHHHHHHCCCEEEEeCcccCC
Confidence 99999999999999999999999999999875 4689999999999874 68999999999999999999998
|
| >3b3d_A YTBE protein, putative morphine dehydrogenase; aldo-keto reductase, oxidoreductase; 2.30A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-46 Score=326.88 Aligned_cols=219 Identities=24% Similarity=0.373 Sum_probs=182.1
Q ss_pred CceecCCCCccccceeecccccCCCCCCCCCHHHHHHHHHHHHHCCCCEEeCcCCcCCCcHHHHHHHHHhc------CCC
Q 025500 9 PRVKLGTQGLEVSKLGYGCMNLSGGYSSPVSEEDGISMIKHAFSKGITFFDTADVYGQNANEVLLGKALKQ------LPR 82 (252)
Q Consensus 9 ~~~~lg~~g~~vs~lglG~~~~g~~~~~~~~~~~~~~~l~~A~~~Gin~~Dta~~Yg~g~se~~ig~~l~~------~~R 82 (252)
.++.| ++|++||.||||||+++ +.+++.+++++|+++|||+||||+.|| +|+.+|+++++ +.|
T Consensus 41 ~~~TL-n~G~~ip~lGlGt~~~~-------d~~e~~~~v~~Al~~Gi~~~DTA~~Yg---nE~~vG~~l~~~~~~~~i~r 109 (314)
T 3b3d_A 41 AKATL-HNGVEMPWFGLGVFQVE-------EGSELVNAVKTAIVHGYRSIDTAAIYG---NEAGVGEGIREGIEEAGISR 109 (314)
T ss_dssp CEEEC-TTSCEEESBCEECCSCC-------CSHHHHHHHHHHHHHTCCEEECCGGGT---CHHHHHHHHHHHHHHHTCCG
T ss_pred CcEEC-CCcCcccceeEECCCCC-------CHHHHHHHHHHHHHcCCCEEECccccC---ChHHHHHHHHHHHHHhCCCc
Confidence 35667 89999999999999875 458899999999999999999999999 79999998874 789
Q ss_pred CCEEEEeccCccCCCCcccccCCChHHHHHHHHHHHHHcCCCcccEEEccCCCCCCCHHHHHHHHHHHHHcCCccEEEcc
Q 025500 83 EKIQVATKFGIAGIGVAGVIVKGAPDYVRSCCEASLKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLS 162 (252)
Q Consensus 83 ~~~~i~tK~~~~~~~~~~~~~~~~~~~i~~~~~~sL~~Lg~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~G~ir~iGvs 162 (252)
+++++++|.+... .+++.+++++++||+|||+||||+|++|||+. ....++|++|++|+++||||+||||
T Consensus 110 ~~~~i~~k~~~~~---------~~~~~~~~~~e~SL~rL~~dyiDL~~~H~~~~-~~~~e~~~al~~l~~~Gkir~iGvS 179 (314)
T 3b3d_A 110 EDLFITSKVWNAD---------LGYEETLAAFETSLSKLGLDYLDLYLIHWPVE-GKYKEAWRALETLYKEGRIKAIGVS 179 (314)
T ss_dssp GGCEEEEEECGGG---------CSHHHHHHHHHHHHHHHTCSCEEEEEESSCCT-TTHHHHHHHHHHHHHTTSEEEEEEE
T ss_pred ccccccccCcCCC---------CCHHHHHHHHHHHHHHhCCCcccccccccccc-cchhHHHHHHHHHHHCCCEeEEEec
Confidence 9999999997654 67999999999999999999999999999975 4678899999999999999999999
Q ss_pred CCCHHHHHHHhhcCCceEEeeecCccccchhhhHHHHHHHhCCeEEecccCccccCCCCCCC------CCCCCC----cc
Q 025500 163 EASPGTIRRAHAVHPITAVQMEWSLWTRDIEEEIIPLCRELGIGIVPYSPLGRGFFGGKAVV------ENVPAD----SF 232 (252)
Q Consensus 163 ~~~~~~l~~~~~~~~~~~~q~~~~~~~~~~~~~l~~~~~~~gi~v~a~spl~~G~L~~~~~~------~~~~~~----~~ 232 (252)
||+.++++++.+...+..+|++|++..+..+.+++++|+++||++++|+||++|.|++++.. ....+. .|
T Consensus 180 n~~~~~l~~~~~~~~i~~~~nq~~~~~~~~~~~ll~~c~~~gI~v~a~sPL~~G~L~~~~~~~~ia~~~g~t~aqvaL~w 259 (314)
T 3b3d_A 180 NFQIHHLEDLMTAAEIKPMINQVEFHPRLTQKELIRYCQNQGIQMEAWSPLMQGQLLDHPVLADIAQTYNKSVAQIILRW 259 (314)
T ss_dssp SCCHHHHHHHTTTCSSCCSEEEEECBTTBCCHHHHHHHHHHTCEEEEESTTGGGTTTTCHHHHHHHHHTTCCHHHHHHHH
T ss_pred CCchHHHHHHHHhcCCCeEEEEeccccccchHHHHHHHHHcCCEEEEeccccCCcccCchhhHHHHHHcCCCHHHHHHHH
Confidence 99999999998875544444444444444458899999999999999999999999987321 112222 23
Q ss_pred ccccCCccccccCccccc
Q 025500 233 LVLFSVNVYPHHFVSSVS 250 (252)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~ 250 (252)
++.+. ..++||+++++
T Consensus 260 ~l~~~--~v~I~G~~~~~ 275 (314)
T 3b3d_A 260 DLQHG--IITIPKSTKEH 275 (314)
T ss_dssp HHHTT--CEECCBCCCHH
T ss_pred HHhCC--CEEEECCCCHH
Confidence 33333 55788888764
|
| >4gac_A Alcohol dehydrogenase [NADP(+)]; TIM barrel, aldheyde reductase AKR1A4, SMAR1, oxidoreductase; HET: FLC; 1.64A {Mus musculus} PDB: 2alr_A 3h4g_A* 3cv7_A* 3fx4_A* 1ae4_A* 1cwn_A* 1hqt_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.1e-46 Score=326.28 Aligned_cols=193 Identities=31% Similarity=0.462 Sum_probs=174.4
Q ss_pred cCceecCCCCccccceeecccccCCCCCCCCCHHHHHHHHHHHHHCCCCEEeCcCCcCCCcHHHHHHHHHhc-------C
Q 025500 8 VPRVKLGTQGLEVSKLGYGCMNLSGGYSSPVSEEDGISMIKHAFSKGITFFDTADVYGQNANEVLLGKALKQ-------L 80 (252)
Q Consensus 8 m~~~~lg~~g~~vs~lglG~~~~g~~~~~~~~~~~~~~~l~~A~~~Gin~~Dta~~Yg~g~se~~ig~~l~~-------~ 80 (252)
-+++.| |||++||.||||||++ +++++.+++++|+++||||||||+.|| +|+.+|++|++ +
T Consensus 2 ~~~v~L-ntG~~vp~iGlGtw~~--------~~~~a~~~i~~Al~~Gin~~DTA~~Yg---sE~~vG~al~~~~~~~~~~ 69 (324)
T 4gac_A 2 ASSVLL-HTGQKMPLIGLGTWKS--------EPGQVKAAIKHALSAGYRHIDCASVYG---NETEIGEALKESVGSGKAV 69 (324)
T ss_dssp CCEEEC-TTSCEEESBCEECTTC--------CHHHHHHHHHHHHHTTCCEEECCGGGS---CHHHHHHHHHHHBSTTSSB
T ss_pred CCeEEC-CCCCEeccceeECCCC--------CHHHHHHHHHHHHHcCCCEEECCcccC---CHHHHHHHHHhhhccccee
Confidence 467778 9999999999999874 679999999999999999999999999 79999999985 5
Q ss_pred CCCCEEEEeccCccCCCCcccccCCChHHHHHHHHHHHHHcCCCcccEEEccCCCC-------------------CCCHH
Q 025500 81 PREKIQVATKFGIAGIGVAGVIVKGAPDYVRSCCEASLKRLDVDYIDLYYQHRVDT-------------------SVPIE 141 (252)
Q Consensus 81 ~R~~~~i~tK~~~~~~~~~~~~~~~~~~~i~~~~~~sL~~Lg~d~iDl~~lh~~~~-------------------~~~~~ 141 (252)
.|+++++++|.+... .+++.+++++++||+|||+||||+|++|||+. ..+++
T Consensus 70 ~r~~~~~~~~~~~~~---------~~~~~i~~~~~~SL~rL~~dyiDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (324)
T 4gac_A 70 PREELFVTSKLWNTK---------HHPEDVEPALRKTLADLQLEYLDLYLMHWPYAFERGDNPFPKNADGTVRYDSTHYK 140 (324)
T ss_dssp CGGGCEEEEEECGGG---------CSHHHHHHHHHHHHHHHTCSCBSEEEESCSSEECSSSCSSCBCTTSCBCEECCCHH
T ss_pred cccccccccccCCCC---------CCHHHHHHHHHHHHHHhCCCccceeeeccCcccccccccccccccCccccCCCCHH
Confidence 789999999987654 57999999999999999999999999999853 34688
Q ss_pred HHHHHHHHHHHcCCccEEEccCCCHHHHHHHhhc--CCceEEeeecCccccchhhhHHHHHHHhCCeEEecccCccccCC
Q 025500 142 ETIGEMKKLVEEGKIKYIGLSEASPGTIRRAHAV--HPITAVQMEWSLWTRDIEEEIIPLCRELGIGIVPYSPLGRGFFG 219 (252)
Q Consensus 142 ~~~~~L~~l~~~G~ir~iGvs~~~~~~l~~~~~~--~~~~~~q~~~~~~~~~~~~~l~~~~~~~gi~v~a~spl~~G~L~ 219 (252)
++|++|++|+++||||+||||||+.++++++... ..+.++|++++++... .+++++|+++||++++|+||++|.++
T Consensus 141 e~~~al~~l~~~Gkir~iGvSn~~~~~l~~~~~~~~~~~~~~q~~~~~~~~~--~~l~~~~~~~gi~~~a~spL~~g~~~ 218 (324)
T 4gac_A 141 ETWKALEVLVAKGLVKALGLSNFNSRQIDDVLSVASVRPAVLQVECHPYLAQ--NELIAHCHARGLEVTAYSPLGSSDRA 218 (324)
T ss_dssp HHHHHHHHHHHTTSBSCEEEESCCHHHHHHHHHHCSSCCCEEEEECBTTBCC--HHHHHHHHHHTCEEEEESTTCCGGGG
T ss_pred HHHHHHHHHHHCCCeeEecCCCCCHHHHHHHHHhCCCCcceeeeccCchhhH--HHHHHHHHHhceeeeecCCcccCccc
Confidence 9999999999999999999999999999998766 4578999999998774 78999999999999999999999998
Q ss_pred CCCC
Q 025500 220 GKAV 223 (252)
Q Consensus 220 ~~~~ 223 (252)
+++.
T Consensus 219 ~~~~ 222 (324)
T 4gac_A 219 WRHP 222 (324)
T ss_dssp GGST
T ss_pred cCCC
Confidence 8754
|
| >3cf4_A Acetyl-COA decarboxylase/synthase alpha subunit; methanomicrobia, iron-nikel-sulfur, 4Fe-NI-4S, oxidoreductas; 2.00A {Methanosarcina barkeri} | Back alignment and structure |
|---|
Probab=97.79 E-value=7.1e-06 Score=79.14 Aligned_cols=100 Identities=13% Similarity=0.100 Sum_probs=75.2
Q ss_pred HHHHHHHcCCCcccEEEccCCCCCCCHHHHHHHHHHHHHcCCccEEEc--cCCCH---H----------------HHHHH
Q 025500 114 CEASLKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGL--SEASP---G----------------TIRRA 172 (252)
Q Consensus 114 ~~~sL~~Lg~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~G~ir~iGv--s~~~~---~----------------~l~~~ 172 (252)
++.+|.+|++|++|++ +|..+.. ..+++++++++++.+|+|+++|+ |++.. + ...++
T Consensus 231 ~e~sL~~L~~d~vdI~-I~Ghn~~-~~~~iLeaa~~a~~~g~I~~iG~c~T~he~lr~~~~~~~~~~~pv~G~~~~~~~~ 308 (807)
T 3cf4_A 231 VEIGMGTIDKSKPFLC-VIGHNVA-GVTYMMDYMEDNNLTDKMEIAGLCCTAIDLTRYKEADRRPPYAKVIGSMSKELKV 308 (807)
T ss_dssp EEESGGGSCTTSCEEE-EESSCCH-HHHHHHHHHHHTTCTTTSEEEEESHHHHHHTTTTCTTCCCCCSEEEESGGGHHHH
T ss_pred eeccccccCCCCceEE-EECCcCc-cHHHHHHHHHHCCCCCCCcEEeeccCCCchhhccccccccccccccccHHHHHHH
Confidence 4567788999999995 6554432 23578999999999999999944 43333 1 23334
Q ss_pred hhcCCceEEeeecCccccchhhhHHHHHHHhCCeEEecccCcc-ccCC
Q 025500 173 HAVHPITAVQMEWSLWTRDIEEEIIPLCRELGIGIVPYSPLGR-GFFG 219 (252)
Q Consensus 173 ~~~~~~~~~q~~~~~~~~~~~~~l~~~~~~~gi~v~a~spl~~-G~L~ 219 (252)
+..+.+++++++|+...+ ++++.|.++|++|++.+|.++ |++.
T Consensus 309 i~tGa~dv~vV~~n~i~~----~ll~~a~~~Gm~Vit~sp~~~~Grpd 352 (807)
T 3cf4_A 309 IRSGMPDVIVVDEQCVRG----DIVPEAQKLKIPVIASNPKIMYGLPN 352 (807)
T ss_dssp HHHTCCSEEEECSSSCCT----THHHHHHHTTCCEEECSTTCCTTCCB
T ss_pred hhcCCCeEEEEEecCCCh----HHHHHHHHCCCEEEEechhhhcCCCc
Confidence 556889999999987653 688999999999999999986 5543
|
| >2pgw_A Muconate cycloisomerase; enolase superfamily, octamer, small metabolism, PSI-II, NYSGXRC, structural genomics, PR structure initiative; 1.95A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=95.49 E-value=0.61 Score=40.79 Aligned_cols=155 Identities=11% Similarity=0.051 Sum_probs=100.5
Q ss_pred CHHHHHHHHHHHHHCCCCEEeCcCCcCCCcHHHHHHHHHhc-CCCCCEEEEeccCccCCCCcccccCCChHHHHHHHHHH
Q 025500 39 SEEDGISMIKHAFSKGITFFDTADVYGQNANEVLLGKALKQ-LPREKIQVATKFGIAGIGVAGVIVKGAPDYVRSCCEAS 117 (252)
Q Consensus 39 ~~~~~~~~l~~A~~~Gin~~Dta~~Yg~g~se~~ig~~l~~-~~R~~~~i~tK~~~~~~~~~~~~~~~~~~~i~~~~~~s 117 (252)
+.++..+....+.+.|++.|..--........+.+ +++++ .+ ++.|..+... .++.+...+- -+.
T Consensus 147 ~~e~~~~~a~~~~~~Gf~~iKik~g~~~~~~~e~v-~avr~a~g--d~~l~vD~n~----------~~~~~~a~~~-~~~ 212 (384)
T 2pgw_A 147 TAEELARDAAVGHAQGERVFYLKVGRGEKLDLEIT-AAVRGEIG--DARLRLDANE----------GWSVHDAINM-CRK 212 (384)
T ss_dssp SHHHHHHHHHHHHHTTCCEEEEECCSCHHHHHHHH-HHHHTTST--TCEEEEECTT----------CCCHHHHHHH-HHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEECcCCCHHHHHHHH-HHHHHHcC--CcEEEEecCC----------CCCHHHHHHH-HHH
Confidence 56778888888999999999853211000122333 55555 44 5555544321 2456655543 346
Q ss_pred HHHcCCCcccEEEccCCCCCCCHHHHHHHHHHHHHcCCccEEEccC-CCHHHHHHHhhcCCceEEeeecCccccch-hhh
Q 025500 118 LKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSE-ASPGTIRRAHAVHPITAVQMEWSLWTRDI-EEE 195 (252)
Q Consensus 118 L~~Lg~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~G~ir~iGvs~-~~~~~l~~~~~~~~~~~~q~~~~~~~~~~-~~~ 195 (252)
|+.+++++++ .|-.. +.|+.+.+++++-.|--++--+ ++.+.++++++....+++|+..+-.-.-. ...
T Consensus 213 l~~~~i~~iE-----qP~~~----~~~~~~~~l~~~~~iPI~~de~i~~~~~~~~~i~~~~~d~v~ik~~~~GGit~~~~ 283 (384)
T 2pgw_A 213 LEKYDIEFIE-----QPTVS----WSIPAMAHVREKVGIPIVADQAAFTLYDVYEICRQRAADMICIGPREIGGIQPMMK 283 (384)
T ss_dssp HGGGCCSEEE-----CCSCT----TCHHHHHHHHHHCSSCEEESTTCCSHHHHHHHHHTTCCSEEEECHHHHTSHHHHHH
T ss_pred HHhcCCCEEe-----CCCCh----hhHHHHHHHHhhCCCCEEEeCCcCCHHHHHHHHHcCCCCEEEEcchhhCCHHHHHH
Confidence 7888877654 44322 3477778888776666555444 67889999998888999999876543321 268
Q ss_pred HHHHHHHhCCeEEecccCccc
Q 025500 196 IIPLCRELGIGIVPYSPLGRG 216 (252)
Q Consensus 196 l~~~~~~~gi~v~a~spl~~G 216 (252)
+.+.|+++|+.++..+.+..+
T Consensus 284 i~~~A~~~g~~~~~~~~~es~ 304 (384)
T 2pgw_A 284 AAAVAEAAGLKICIHSSFTTG 304 (384)
T ss_dssp HHHHHHHTTCCEEECCCSCCH
T ss_pred HHHHHHHCCCeEeeccCcCCH
Confidence 999999999999988755544
|
| >1nu5_A Chloromuconate cycloisomerase; enzyme, dehalogenation; 1.95A {Pseudomonas SP} SCOP: c.1.11.2 d.54.1.1 | Back alignment and structure |
|---|
Probab=95.14 E-value=0.59 Score=40.62 Aligned_cols=158 Identities=10% Similarity=0.063 Sum_probs=97.7
Q ss_pred CHHHHHHHHHHHHH-CCCCEEeCcCCcCCCcHHHHHHHHHhcCCCCCEEEEeccCccCCCCcccccCCChHHHHHHHHHH
Q 025500 39 SEEDGISMIKHAFS-KGITFFDTADVYGQNANEVLLGKALKQLPREKIQVATKFGIAGIGVAGVIVKGAPDYVRSCCEAS 117 (252)
Q Consensus 39 ~~~~~~~~l~~A~~-~Gin~~Dta~~Yg~g~se~~ig~~l~~~~R~~~~i~tK~~~~~~~~~~~~~~~~~~~i~~~~~~s 117 (252)
+.++..+....+.+ .|++.|..--.-++-.....+=+++++.-.+++.|...... .++.+...+-+ +.
T Consensus 142 ~~e~~~~~a~~~~~~~Gf~~iKik~g~~~~~~~~e~v~avr~a~g~~~~l~vDan~----------~~~~~~a~~~~-~~ 210 (370)
T 1nu5_A 142 DTARDIDSALEMIETRRHNRFKVKLGARTPAQDLEHIRSIVKAVGDRASVRVDVNQ----------GWDEQTASIWI-PR 210 (370)
T ss_dssp CHHHHHHHHHHHHHTTSCSEEEEECSSSCHHHHHHHHHHHHHHHGGGCEEEEECTT----------CCCHHHHHHHH-HH
T ss_pred CHHHHHHHHHHHHHhCCccEEEEecCCCChHHHHHHHHHHHHhcCCCCEEEEECCC----------CCCHHHHHHHH-HH
Confidence 56777788888999 99999885321111011222223444311123444444321 24566555444 46
Q ss_pred HHHcCCCcccEEEccCCCCCCCHHHHHHHHHHHHHcCCccEEEc-cCCCHHHHHHHhhcCCceEEeeecCccccchh-hh
Q 025500 118 LKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGL-SEASPGTIRRAHAVHPITAVQMEWSLWTRDIE-EE 195 (252)
Q Consensus 118 L~~Lg~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~G~ir~iGv-s~~~~~~l~~~~~~~~~~~~q~~~~~~~~~~~-~~ 195 (252)
|+.+++++ +..|-.. +.|+.+.+++++-.|.-++- +-++.+.++++++....+++|+..+..-.-.+ ..
T Consensus 211 l~~~~i~~-----iEqP~~~----~~~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~i~~~~~d~v~ik~~~~GGit~~~~ 281 (370)
T 1nu5_A 211 LEEAGVEL-----VEQPVPR----ANFGALRRLTEQNGVAILADESLSSLSSAFELARDHAVDAFSLKLCNMGGIANTLK 281 (370)
T ss_dssp HHHHTCCE-----EECCSCT----TCHHHHHHHHHHCSSEEEESTTCCSHHHHHHHHHTTCCSEEEECHHHHTSHHHHHH
T ss_pred HHhcCcce-----EeCCCCc----ccHHHHHHHHHhCCCCEEeCCCCCCHHHHHHHHHhCCCCEEEEchhhcCCHHHHHH
Confidence 78777764 4455332 34777788887655554433 34788899999988889999998765432212 68
Q ss_pred HHHHHHHhCCeEEecccCccc
Q 025500 196 IIPLCRELGIGIVPYSPLGRG 216 (252)
Q Consensus 196 l~~~~~~~gi~v~a~spl~~G 216 (252)
+.+.|+++|+.++..+.+..+
T Consensus 282 i~~~A~~~g~~~~~~~~~es~ 302 (370)
T 1nu5_A 282 VAAVAEAAGISSYGGTMLDST 302 (370)
T ss_dssp HHHHHHHHTCEEEECCSSCCH
T ss_pred HHHHHHHcCCcEEecCCcchH
Confidence 999999999999988776544
|
| >1mdl_A Mandelate racemase; isomerase, mandelate pathway, magnesium; HET: RMN SMN; 1.85A {Pseudomonas aeruginosa} SCOP: c.1.11.2 d.54.1.1 PDB: 1mdr_A* 3uxk_A* 3uxl_A* 1dtn_A* 1mra_A* 2mnr_A 1mns_A | Back alignment and structure |
|---|
Probab=95.12 E-value=0.95 Score=39.08 Aligned_cols=153 Identities=9% Similarity=0.028 Sum_probs=97.6
Q ss_pred CHHHHHHHHHHHHHCCCCEEeCcCCcCCCc-HHHHHHHHHhcCCCCCEEEEeccCccCCCCcccccCCChHHHHHHHHHH
Q 025500 39 SEEDGISMIKHAFSKGITFFDTADVYGQNA-NEVLLGKALKQLPREKIQVATKFGIAGIGVAGVIVKGAPDYVRSCCEAS 117 (252)
Q Consensus 39 ~~~~~~~~l~~A~~~Gin~~Dta~~Yg~g~-se~~ig~~l~~~~R~~~~i~tK~~~~~~~~~~~~~~~~~~~i~~~~~~s 117 (252)
+.++..+....+.+.|++.|..--..++-+ ..+.+ +++++.-..++-|..+... .++.+...+-++.
T Consensus 144 ~~~~~~~~a~~~~~~Gf~~iKik~g~~~~~~~~e~v-~avr~a~g~~~~l~vDan~----------~~~~~~a~~~~~~- 211 (359)
T 1mdl_A 144 GVKLATERAVTAAELGFRAVKTRIGYPALDQDLAVV-RSIRQAVGDDFGIMVDYNQ----------SLDVPAAIKRSQA- 211 (359)
T ss_dssp HHHHHHHHHHHHHHTTCSEEEEECCCSSHHHHHHHH-HHHHHHHCSSSEEEEECTT----------CSCHHHHHHHHHH-
T ss_pred CHHHHHHHHHHHHHcCCCEEEEecCCCCHHHHHHHH-HHHHHHhCCCCEEEEECCC----------CCCHHHHHHHHHH-
Confidence 567777888888999999998532111101 22333 3444411234445444421 2456655554444
Q ss_pred HHHcCCCcccEEEccCCCCCCCHHHHHHHHHHHHHcCCccEEEccC-CCHHHHHHHhhcCCceEEeeecCccccchh-hh
Q 025500 118 LKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSE-ASPGTIRRAHAVHPITAVQMEWSLWTRDIE-EE 195 (252)
Q Consensus 118 L~~Lg~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~G~ir~iGvs~-~~~~~l~~~~~~~~~~~~q~~~~~~~~~~~-~~ 195 (252)
|+.++++++ ..|-.. +.|+.+.+++++-.|.-++--+ ++.+.++++++....+++|+..+..-.-.+ ..
T Consensus 212 l~~~~i~~i-----E~P~~~----~~~~~~~~l~~~~~iPI~~de~~~~~~~~~~~i~~~~~d~v~ik~~~~GGi~~~~~ 282 (359)
T 1mdl_A 212 LQQEGVTWI-----EEPTLQ----HDYEGHQRIQSKLNVPVQMGENWLGPEEMFKALSIGACRLAMPDAMKIGGVTGWIR 282 (359)
T ss_dssp HHHHTCSCE-----ECCSCT----TCHHHHHHHHHTCSSCEEECTTCCSHHHHHHHHHTTCCSEECCBTTTTTHHHHHHH
T ss_pred HHHhCCCeE-----ECCCCh----hhHHHHHHHHHhCCCCEEeCCCCCCHHHHHHHHHcCCCCEEeecchhhCCHHHHHH
Confidence 788887765 344322 3477888888876666555443 678899999988889999998876543222 68
Q ss_pred HHHHHHHhCCeEEeccc
Q 025500 196 IIPLCRELGIGIVPYSP 212 (252)
Q Consensus 196 l~~~~~~~gi~v~a~sp 212 (252)
+.+.|+++|+.++..+.
T Consensus 283 i~~~A~~~g~~~~~~~~ 299 (359)
T 1mdl_A 283 ASALAQQFGIPMSSHLF 299 (359)
T ss_dssp HHHHHHHTTCCBCCBSC
T ss_pred HHHHHHHcCCeEeeccH
Confidence 99999999999887753
|
| >2nql_A AGR_PAT_674P, isomerase/lactonizing enzyme; enolase, structural genomics, protein structure initiative, nysgxrc; 1.80A {Agrobacterium tumefaciens str} PDB: 4dn1_A | Back alignment and structure |
|---|
Probab=95.10 E-value=0.57 Score=41.05 Aligned_cols=156 Identities=17% Similarity=0.177 Sum_probs=99.9
Q ss_pred CHHHHHHHHHHHHHCCCCEEeCcCCcCCCcHHHHHHHHHhcCCCCCEEEEeccCccCCCCcccccCCChHHHHHHHHHHH
Q 025500 39 SEEDGISMIKHAFSKGITFFDTADVYGQNANEVLLGKALKQLPREKIQVATKFGIAGIGVAGVIVKGAPDYVRSCCEASL 118 (252)
Q Consensus 39 ~~~~~~~~l~~A~~~Gin~~Dta~~Yg~g~se~~ig~~l~~~~R~~~~i~tK~~~~~~~~~~~~~~~~~~~i~~~~~~sL 118 (252)
+.++..+....+.+.|++.|..--.-.+-+..+.+ +++++.-..++.|..+... .++.+...+-++ .|
T Consensus 164 ~~e~~~~~a~~~~~~Gf~~vKik~g~~~~~~~e~v-~avr~a~g~d~~l~vDan~----------~~~~~~a~~~~~-~l 231 (388)
T 2nql_A 164 TLKARGELAKYWQDRGFNAFKFATPVADDGPAAEI-ANLRQVLGPQAKIAADMHW----------NQTPERALELIA-EM 231 (388)
T ss_dssp SHHHHHHHHHHHHHTTCCEEEEEGGGCTTCHHHHH-HHHHHHHCTTSEEEEECCS----------CSCHHHHHHHHH-HH
T ss_pred CHHHHHHHHHHHHHhCCCEEEEeCCCCChHHHHHH-HHHHHHhCCCCEEEEECCC----------CCCHHHHHHHHH-HH
Confidence 57888888889999999998853111011123333 3444411234445444321 245666555544 48
Q ss_pred HHcCCCcccEEEccCCCCCCCHHHHHHHHHHHHHcCCccEEEccC-CCHHHHHHHhhcCCceEEeeecCccccchh-hhH
Q 025500 119 KRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSE-ASPGTIRRAHAVHPITAVQMEWSLWTRDIE-EEI 196 (252)
Q Consensus 119 ~~Lg~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~G~ir~iGvs~-~~~~~l~~~~~~~~~~~~q~~~~~~~~~~~-~~l 196 (252)
+.++++++ ..|-.. +.|+.+.+++++-.|.-++--+ ++.+.++++++....+++|+..+. -.-.+ ..+
T Consensus 232 ~~~~i~~i-----EqP~~~----~d~~~~~~l~~~~~iPI~~dE~~~~~~~~~~~i~~~~~d~v~ik~~~-GGit~~~~i 301 (388)
T 2nql_A 232 QPFDPWFA-----EAPVWT----EDIAGLEKVSKNTDVPIAVGEEWRTHWDMRARIERCRIAIVQPEMGH-KGITNFIRI 301 (388)
T ss_dssp GGGCCSCE-----ECCSCT----TCHHHHHHHHTSCCSCEEECTTCCSHHHHHHHHTTSCCSEECCCHHH-HCHHHHHHH
T ss_pred hhcCCCEE-----ECCCCh----hhHHHHHHHHhhCCCCEEEeCCcCCHHHHHHHHHcCCCCEEEecCCC-CCHHHHHHH
Confidence 88887765 344322 3477888888776666554444 678899999988889999998776 32222 678
Q ss_pred HHHHHHhCCeEEecccCccc
Q 025500 197 IPLCRELGIGIVPYSPLGRG 216 (252)
Q Consensus 197 ~~~~~~~gi~v~a~spl~~G 216 (252)
.+.|+++|+.++..+.+..+
T Consensus 302 ~~~A~~~g~~~~~h~~~es~ 321 (388)
T 2nql_A 302 GALAAEHGIDVIPHATVGAG 321 (388)
T ss_dssp HHHHHHHTCEECCCCCSSCS
T ss_pred HHHHHHcCCeEEeecCCCcH
Confidence 99999999999987655544
|
| >2rdx_A Mandelate racemase/muconate lactonizing enzyme, P; enolase, structural genomics, PSI, protein structu initiative, nysgrc; 2.00A {Roseovarius nubinhibens} | Back alignment and structure |
|---|
Probab=95.10 E-value=0.42 Score=41.79 Aligned_cols=154 Identities=10% Similarity=-0.055 Sum_probs=96.3
Q ss_pred CHHHHHHHHHHHHHCCCCEEeCcCCcCCCcHHHHHHHHHhcCCCCCEEEEeccCccCCCCcccccCCChHHHHHHHHHHH
Q 025500 39 SEEDGISMIKHAFSKGITFFDTADVYGQNANEVLLGKALKQLPREKIQVATKFGIAGIGVAGVIVKGAPDYVRSCCEASL 118 (252)
Q Consensus 39 ~~~~~~~~l~~A~~~Gin~~Dta~~Yg~g~se~~ig~~l~~~~R~~~~i~tK~~~~~~~~~~~~~~~~~~~i~~~~~~sL 118 (252)
+.++..+....+.+.|++.|..--.... +....+=+++++.-..++.|..+... .++.+...+-+ +.|
T Consensus 145 ~~~~~~~~a~~~~~~Gf~~iKik~g~~~-~~~~e~v~avr~a~g~d~~l~vDan~----------~~~~~~a~~~~-~~l 212 (379)
T 2rdx_A 145 SEAETRAELARHRAAGYRQFQIKVGADW-QSDIDRIRACLPLLEPGEKAMADANQ----------GWRVDNAIRLA-RAT 212 (379)
T ss_dssp CSHHHHHHHHHHHHTTCCEEEEECCSCH-HHHHHHHHHHGGGSCTTCEEEEECTT----------CSCHHHHHHHH-HHT
T ss_pred CHHHHHHHHHHHHHcCCCEEEEeccCCH-HHHHHHHHHHHHhcCCCCEEEEECCC----------CCCHHHHHHHH-HHH
Confidence 4577778888899999999885321110 12222234555422335555555421 13555444322 224
Q ss_pred HHcCCCcccEEEccCCCCCCCHHHHHHHHHHHHHcCCccEEEccC-CCHHHHHHHhhcCCceEEeeecCccccchh-hhH
Q 025500 119 KRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSE-ASPGTIRRAHAVHPITAVQMEWSLWTRDIE-EEI 196 (252)
Q Consensus 119 ~~Lg~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~G~ir~iGvs~-~~~~~l~~~~~~~~~~~~q~~~~~~~~~~~-~~l 196 (252)
+.++ + ++..|-. .++.+.+++++-.|--++--+ ++.+.++++++....+++|+..+..-.-.+ ..+
T Consensus 213 ~~~~-----i-~iE~P~~------~~~~~~~l~~~~~iPI~~de~i~~~~~~~~~i~~~~~d~v~ik~~~~GGit~~~~i 280 (379)
T 2rdx_A 213 RDLD-----Y-ILEQPCR------SYEECQQVRRVADQPMKLDECVTGLHMAQRIVADRGAEICCLKISNLGGLSKARRT 280 (379)
T ss_dssp TTSC-----C-EEECCSS------SHHHHHHHHTTCCSCEEECTTCCSHHHHHHHHHHTCCSEEEEETTTTTSHHHHHHH
T ss_pred HhCC-----e-EEeCCcC------CHHHHHHHHhhCCCCEEEeCCcCCHHHHHHHHHcCCCCEEEEeccccCCHHHHHHH
Confidence 4444 4 4555532 477888888776665554433 678899999988889999998877543222 689
Q ss_pred HHHHHHhCCeEEecccCccc
Q 025500 197 IPLCRELGIGIVPYSPLGRG 216 (252)
Q Consensus 197 ~~~~~~~gi~v~a~spl~~G 216 (252)
.+.|+++|+.++..+.+..+
T Consensus 281 ~~~A~~~g~~~~~~~~~es~ 300 (379)
T 2rdx_A 281 RDFLIDNRMPVVAEDSWGGE 300 (379)
T ss_dssp HHHHHHTTCCEEEECSBCSH
T ss_pred HHHHHHcCCeEEEeeccCcH
Confidence 99999999999988655444
|
| >3i4k_A Muconate lactonizing enzyme; structural genomics, NYSGXRC, target 9450D, isomerase, PSI-2, protein structure initiative; 2.20A {Corynebacterium glutamicum} | Back alignment and structure |
|---|
Probab=95.02 E-value=1.3 Score=38.68 Aligned_cols=158 Identities=9% Similarity=0.089 Sum_probs=98.3
Q ss_pred CHHHHHHHHHHHHHC-CCCEEeCcCCcCCCcHHHHHHHHHhcCCCCCEEEEeccCccCCCCcccccCCChHHHHHHHHHH
Q 025500 39 SEEDGISMIKHAFSK-GITFFDTADVYGQNANEVLLGKALKQLPREKIQVATKFGIAGIGVAGVIVKGAPDYVRSCCEAS 117 (252)
Q Consensus 39 ~~~~~~~~l~~A~~~-Gin~~Dta~~Yg~g~se~~ig~~l~~~~R~~~~i~tK~~~~~~~~~~~~~~~~~~~i~~~~~~s 117 (252)
+.++..+....+++. |++.|-.--...+-..+...=+++++.-.+++.|...... .++.+... .+-+.
T Consensus 148 ~~~~~~~~a~~~~~~~G~~~~K~Kvg~~~~~~d~~~v~avR~a~g~~~~l~vDan~----------~~~~~~A~-~~~~~ 216 (383)
T 3i4k_A 148 PLDVAVAEIEERIEEFGNRSFKLKMGAGDPAEDTRRVAELAREVGDRVSLRIDINA----------RWDRRTAL-HYLPI 216 (383)
T ss_dssp CHHHHHHHHHHHHHHHCCSEEEEECCSSCHHHHHHHHHHHHHTTTTTSEEEEECTT----------CSCHHHHH-HHHHH
T ss_pred CHHHHHHHHHHHHHhcCCcEEEEeeCCCCHHHHHHHHHHHHHHcCCCCEEEEECCC----------CCCHHHHH-HHHHH
Confidence 567777778888887 9999875422111112233335566533345555555422 13454443 34466
Q ss_pred HHHcCCCcccEEEccCCCCCCCHHHHHHHHHHHHHcCCcc-EEEccCCCHHHHHHHhhcCCceEEeeecCccccchh-hh
Q 025500 118 LKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIK-YIGLSEASPGTIRRAHAVHPITAVQMEWSLWTRDIE-EE 195 (252)
Q Consensus 118 L~~Lg~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~G~ir-~iGvs~~~~~~l~~~~~~~~~~~~q~~~~~~~~~~~-~~ 195 (252)
|+.++++++ ..|-... .++.+.+++++-.+. ..|=+-++.+.+.++++....+++|+..+..-.-.+ ..
T Consensus 217 l~~~~i~~i-----EqP~~~~----d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~~~d~v~~k~~~~GGit~~~~ 287 (383)
T 3i4k_A 217 LAEAGVELF-----EQPTPAD----DLETLREITRRTNVSVMADESVWTPAEALAVVKAQAADVIALKTTKHGGLLESKK 287 (383)
T ss_dssp HHHTTCCEE-----ESCSCTT----CHHHHHHHHHHHCCEEEESTTCSSHHHHHHHHHHTCCSEEEECTTTTTSHHHHHH
T ss_pred HHhcCCCEE-----ECCCChh----hHHHHHHHHhhCCCCEEecCccCCHHHHHHHHHcCCCCEEEEcccccCCHHHHHH
Confidence 777776555 4554322 356667777653443 334455788999999988889999998876543222 77
Q ss_pred HHHHHHHhCCeEEecccCccc
Q 025500 196 IIPLCRELGIGIVPYSPLGRG 216 (252)
Q Consensus 196 l~~~~~~~gi~v~a~spl~~G 216 (252)
+.+.|+++|+.++..+.+..+
T Consensus 288 ia~~A~~~gi~~~~~~~~es~ 308 (383)
T 3i4k_A 288 IAAIAEAGGLACHGATSLEGP 308 (383)
T ss_dssp HHHHHHHTTCEEEECCSCCCH
T ss_pred HHHHHHHcCCeEEeCCCCccH
Confidence 999999999999877665543
|
| >2zad_A Muconate cycloisomerase; muconate lactonizing enzyme (MLE), TM0006, struct genomics, NPPSFA; HET: 1PE; 1.60A {Thermotoga maritima} PDB: 3deq_A 3der_A* 3des_A* 3dfy_A | Back alignment and structure |
|---|
Probab=95.00 E-value=0.64 Score=39.99 Aligned_cols=157 Identities=8% Similarity=0.037 Sum_probs=98.0
Q ss_pred CHHHHHHHHHHHHHCCCCEEeCcCCcCCCcHHHHHHHHHhcCCCCCEEEEeccCccCCCCcccccCCChHHHHHHHHHHH
Q 025500 39 SEEDGISMIKHAFSKGITFFDTADVYGQNANEVLLGKALKQLPREKIQVATKFGIAGIGVAGVIVKGAPDYVRSCCEASL 118 (252)
Q Consensus 39 ~~~~~~~~l~~A~~~Gin~~Dta~~Yg~g~se~~ig~~l~~~~R~~~~i~tK~~~~~~~~~~~~~~~~~~~i~~~~~~sL 118 (252)
+.++..+....+.+.|++.|..--.-......+.+ +++++. ..++.|..... ..++.+...+-+ +.|
T Consensus 139 ~~~~~~~~a~~~~~~Gf~~iKik~g~~~~~d~~~v-~avr~~-g~~~~l~vDan----------~~~~~~~a~~~~-~~l 205 (345)
T 2zad_A 139 TVENRVKEAKKIFEEGFRVIKIKVGENLKEDIEAV-EEIAKV-TRGAKYIVDAN----------MGYTQKEAVEFA-RAV 205 (345)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEEECCSCHHHHHHHH-HHHHHH-STTCEEEEECT----------TCSCHHHHHHHH-HHH
T ss_pred CHHHHHHHHHHHHHcCcCEEEEeecCCHHHHHHHH-HHHHhh-CCCCeEEEECC----------CCCCHHHHHHHH-HHH
Confidence 56777888888999999998752111100122333 555543 34444433221 124566655544 447
Q ss_pred HHcCCCcccEEEccCCCCCCCHHHHHHHHHHHHHcCCccEEEc-cCCCHHHHHHHhhcCCceEEeeecCccccchh-hhH
Q 025500 119 KRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGL-SEASPGTIRRAHAVHPITAVQMEWSLWTRDIE-EEI 196 (252)
Q Consensus 119 ~~Lg~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~G~ir~iGv-s~~~~~~l~~~~~~~~~~~~q~~~~~~~~~~~-~~l 196 (252)
+.++++ ..++..|-.. +.++.+.+++++-.|.-.+- +-++.+.++++++....+++|+..+- -.-.+ ..+
T Consensus 206 ~~~~i~---~~~iE~P~~~----~~~~~~~~l~~~~~ipia~dE~~~~~~~~~~~i~~~~~d~v~ik~~~-GGit~~~~i 277 (345)
T 2zad_A 206 YQKGID---IAVYEQPVRR----EDIEGLKFVRFHSPFPVAADESARTKFDVMRLVKEEAVDYVNIKLMK-SGISDALAI 277 (345)
T ss_dssp HHTTCC---CSEEECCSCT----TCHHHHHHHHHHSSSCEEESTTCCSHHHHHHHHHHTCCSEEEECHHH-HHHHHHHHH
T ss_pred HhcCCC---eeeeeCCCCc----ccHHHHHHHHHhCCCCEEEeCCcCCHHHHHHHHHhCCCCEEEEeccc-ccHHHHHHH
Confidence 777765 1144565432 33677777877655554433 34688899999988889999997766 32112 679
Q ss_pred HHHHHHhCCeEEecccCccc
Q 025500 197 IPLCRELGIGIVPYSPLGRG 216 (252)
Q Consensus 197 ~~~~~~~gi~v~a~spl~~G 216 (252)
.+.|+++|+.++..+.+..+
T Consensus 278 ~~~A~~~g~~~~~~~~~es~ 297 (345)
T 2zad_A 278 VEIAESSGLKLMIGCMGESS 297 (345)
T ss_dssp HHHHHTTTCEEEECCSSCCH
T ss_pred HHHHHHcCCeEEEecCcccH
Confidence 99999999999998776444
|
| >2ovl_A Putative racemase; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.13A {Streptomyces coelicolor A3} PDB: 3ck5_A | Back alignment and structure |
|---|
Probab=94.86 E-value=0.75 Score=40.01 Aligned_cols=154 Identities=10% Similarity=0.044 Sum_probs=95.7
Q ss_pred CHHHHHHHHHHHHHCCCCEEeCcCCcCC-CcHHHHHHHHHhcCCCCCEEEEeccCccCCCCcccccCCChHHHHHHHHHH
Q 025500 39 SEEDGISMIKHAFSKGITFFDTADVYGQ-NANEVLLGKALKQLPREKIQVATKFGIAGIGVAGVIVKGAPDYVRSCCEAS 117 (252)
Q Consensus 39 ~~~~~~~~l~~A~~~Gin~~Dta~~Yg~-g~se~~ig~~l~~~~R~~~~i~tK~~~~~~~~~~~~~~~~~~~i~~~~~~s 117 (252)
+.++..+....+.+.|++.|..--..++ ....+.+ +++++.--.++.|..+... .++.+...+-++ .
T Consensus 146 ~~e~~~~~a~~~~~~Gf~~iKik~g~~~~~~~~e~v-~avr~a~G~d~~l~vDan~----------~~~~~~a~~~~~-~ 213 (371)
T 2ovl_A 146 PVADLKTQADRFLAGGFRAIKMKVGRPDLKEDVDRV-SALREHLGDSFPLMVDANM----------KWTVDGAIRAAR-A 213 (371)
T ss_dssp CHHHHHHHHHHHHHTTCSCEEEECCCSSHHHHHHHH-HHHHHHHCTTSCEEEECTT----------CSCHHHHHHHHH-H
T ss_pred CHHHHHHHHHHHHHcCCCEEEECCCCCCHHHHHHHH-HHHHHHhCCCCeEEEECCC----------CCCHHHHHHHHH-H
Confidence 5777888888899999999885321111 0122333 4444411123333333321 245665554444 4
Q ss_pred HHHcCCCcccEEEccCCCCCCCHHHHHHHHHHHHHcCCccEEEc-cCCCHHHHHHHhhcCCceEEeeecCccccchh-hh
Q 025500 118 LKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGL-SEASPGTIRRAHAVHPITAVQMEWSLWTRDIE-EE 195 (252)
Q Consensus 118 L~~Lg~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~G~ir~iGv-s~~~~~~l~~~~~~~~~~~~q~~~~~~~~~~~-~~ 195 (252)
|+.++++++ ..|-.. +.|+.+.+++++-.|.-++- +-++.+.++++++....+++|+..+-.-.-.+ ..
T Consensus 214 l~~~~i~~i-----EqP~~~----~d~~~~~~l~~~~~iPI~~dE~~~~~~~~~~~i~~~~~d~v~ik~~~~GGi~~~~~ 284 (371)
T 2ovl_A 214 LAPFDLHWI-----EEPTIP----DDLVGNARIVRESGHTIAGGENLHTLYDFHNAVRAGSLTLPEPDVSNIGGYTTFRK 284 (371)
T ss_dssp HGGGCCSEE-----ECCSCT----TCHHHHHHHHHHHCSCEEECTTCCSHHHHHHHHHHTCCSEECCCTTTTTSHHHHHH
T ss_pred HHhcCCCEE-----ECCCCc----ccHHHHHHHHhhCCCCEEeCCCCCCHHHHHHHHHcCCCCEEeeCccccCCHHHHHH
Confidence 777777654 455332 23667777776645554443 34688999999988889999998876543222 78
Q ss_pred HHHHHHHhCCeEEecccC
Q 025500 196 IIPLCRELGIGIVPYSPL 213 (252)
Q Consensus 196 l~~~~~~~gi~v~a~spl 213 (252)
+.+.|+++|+.++..+.+
T Consensus 285 i~~~A~~~gi~~~~h~~~ 302 (371)
T 2ovl_A 285 VAALAEANNMLLTSHGVH 302 (371)
T ss_dssp HHHHHHHTTCCEEECSCH
T ss_pred HHHHHHHcCCeEccccHH
Confidence 999999999999987654
|
| >3ik4_A Mandelate racemase/muconate lactonizing protein; structural genomics, enolase, epimerase, PSI-2, protein STRU initiative; 2.10A {Herpetosiphon aurantiacus atcc 23779} | Back alignment and structure |
|---|
Probab=94.63 E-value=0.74 Score=40.06 Aligned_cols=157 Identities=12% Similarity=0.074 Sum_probs=99.1
Q ss_pred CHHHHHHHHHHHHHCCCCEEeCcCCcCCCcHHHHHHHHHhc-CCCCCEEEEeccCccCCCCcccccCCChHHHHHHHHHH
Q 025500 39 SEEDGISMIKHAFSKGITFFDTADVYGQNANEVLLGKALKQ-LPREKIQVATKFGIAGIGVAGVIVKGAPDYVRSCCEAS 117 (252)
Q Consensus 39 ~~~~~~~~l~~A~~~Gin~~Dta~~Yg~g~se~~ig~~l~~-~~R~~~~i~tK~~~~~~~~~~~~~~~~~~~i~~~~~~s 117 (252)
+.++..+..+.+++.|++.|-.--...+-..+...=+++++ .+.-++.|=..- .++.+... +.
T Consensus 143 ~~e~~~~~a~~~~~~G~~~iK~Kvg~~~~~~d~~~v~avr~~~~~~~l~vDaN~------------~~~~~~A~----~~ 206 (365)
T 3ik4_A 143 DEVHAAASAKAILARGIKSIKVKTAGVDVAYDLARLRAIHQAAPTAPLIVDGNC------------GYDVERAL----AF 206 (365)
T ss_dssp CHHHHHHHHHHHHHTTCCCEEEECCSSCHHHHHHHHHHHHHHSSSCCEEEECTT------------CCCHHHHH----HH
T ss_pred CHHHHHHHHHHHHHcCCCEEEEEeCCCCHHHHHHHHHHHHHhCCCCeEEEECCC------------CCCHHHHH----HH
Confidence 67888888899999999987643211110122222344554 443344442221 23444333 23
Q ss_pred HHHcCCCcccEEEccCCCCCCCHHHHHHHHHHHHHcCCc-cEEEccCCCHHHHHHHhhcCCceEEeeecCccccchh-hh
Q 025500 118 LKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKI-KYIGLSEASPGTIRRAHAVHPITAVQMEWSLWTRDIE-EE 195 (252)
Q Consensus 118 L~~Lg~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~G~i-r~iGvs~~~~~~l~~~~~~~~~~~~q~~~~~~~~~~~-~~ 195 (252)
+++|..+..++.++..|-...+ ++.+.+++++-.+ -+.|=+-++...+.++++...++++|+..+. -.-.+ ..
T Consensus 207 ~~~L~~~~~~i~~iEeP~~~~d----~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~i~~~a~d~v~ik~~~-GGit~~~~ 281 (365)
T 3ik4_A 207 CAACKAESIPMVLFEQPLPRED----WAGMAQVTAQSGFAVAADESARSAHDVLRIAREGTASVINIKLMK-AGVAEGLK 281 (365)
T ss_dssp HHHHHHTTCCEEEEECCSCTTC----HHHHHHHHHHSSSCEEESTTCSSHHHHHHHHHHTCCSEEEECHHH-HCHHHHHH
T ss_pred HHHHhhCCCCceEEECCCCccc----HHHHHHHHhhCCCCEEECCCCCCHHHHHHHHHhCCCCEEEEcCCc-cCHHHHHH
Confidence 3344112358888888865433 6677777765444 4556666889999999888889999998877 32112 67
Q ss_pred HHHHHHHhCCeEEecccCccc
Q 025500 196 IIPLCRELGIGIVPYSPLGRG 216 (252)
Q Consensus 196 l~~~~~~~gi~v~a~spl~~G 216 (252)
+.+.|+++|+.++..+.+..+
T Consensus 282 i~~~A~~~gi~~~~~~~~es~ 302 (365)
T 3ik4_A 282 MIAIAQAAGLGLMIGGMVESI 302 (365)
T ss_dssp HHHHHHHHTCEEEECCSSCCH
T ss_pred HHHHHHHcCCeEEecCCcccH
Confidence 899999999999988877544
|
| >1tkk_A Similar to chloromuconate cycloisomerase; epimerase, enolase super family,; 2.10A {Bacillus subtilis} SCOP: c.1.11.2 d.54.1.1 PDB: 1jpm_A | Back alignment and structure |
|---|
Probab=94.56 E-value=0.76 Score=39.83 Aligned_cols=158 Identities=8% Similarity=0.064 Sum_probs=96.4
Q ss_pred CHHHHHHHHHHHHHCCCCEEeCcCCcCCCc-HHHHHHHHHhcCCCCCEEEEeccCccCCCCcccccCCChHHHHHHHHHH
Q 025500 39 SEEDGISMIKHAFSKGITFFDTADVYGQNA-NEVLLGKALKQLPREKIQVATKFGIAGIGVAGVIVKGAPDYVRSCCEAS 117 (252)
Q Consensus 39 ~~~~~~~~l~~A~~~Gin~~Dta~~Yg~g~-se~~ig~~l~~~~R~~~~i~tK~~~~~~~~~~~~~~~~~~~i~~~~~~s 117 (252)
+.++..+....+.+.|++.|..--.-++-. ..+.+ +++++.-..++.|...... .++.+...+-++.
T Consensus 140 ~~~~~~~~a~~~~~~Gf~~iKik~g~~~~~~d~~~v-~avr~a~g~~~~l~vDan~----------~~~~~~a~~~~~~- 207 (366)
T 1tkk_A 140 SPEEMAADAENYLKQGFQTLKIKVGKDDIATDIARI-QEIRKRVGSAVKLRLDANQ----------GWRPKEAVTAIRK- 207 (366)
T ss_dssp CHHHHHHHHHHHHHHTCCEEEEECCSSCHHHHHHHH-HHHHHHHCSSSEEEEECTT----------CSCHHHHHHHHHH-
T ss_pred CHHHHHHHHHHHHHcCCCeEEEEeCCCCHHHHHHHH-HHHHHHhCCCCeEEEECCC----------CCCHHHHHHHHHH-
Confidence 567777888888899999998532111101 12333 3444411124445444321 2456555544443
Q ss_pred HHHcCCCcccEEEccCCCCCCCHHHHHHHHHHHHHcCCccEE-EccCCCHHHHHHHhhcCCceEEeeecCccccchh-hh
Q 025500 118 LKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYI-GLSEASPGTIRRAHAVHPITAVQMEWSLWTRDIE-EE 195 (252)
Q Consensus 118 L~~Lg~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~G~ir~i-Gvs~~~~~~l~~~~~~~~~~~~q~~~~~~~~~~~-~~ 195 (252)
|+..+ .++.++..|-.. +.|+.+.+++++-.|.-. |=+-++.+.+.++++....+++|+..+..-.-.+ ..
T Consensus 208 l~~~~---~~i~~iEqP~~~----~d~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~i~~~~~d~v~ik~~~~GGit~~~~ 280 (366)
T 1tkk_A 208 MEDAG---LGIELVEQPVHK----DDLAGLKKVTDATDTPIMADESVFTPRQAFEVLQTRSADLINIKLMKAGGISGAEK 280 (366)
T ss_dssp HHHTT---CCEEEEECCSCT----TCHHHHHHHHHHCSSCEEECTTCCSHHHHHHHHHHTCCSEEEECHHHHTSHHHHHH
T ss_pred HhhcC---CCceEEECCCCc----ccHHHHHHHHhhCCCCEEEcCCCCCHHHHHHHHHhCCCCEEEeehhhhcCHHHHHH
Confidence 66611 244566666432 236777778776555433 3344788899999988889999998766432212 67
Q ss_pred HHHHHHHhCCeEEecccCcc
Q 025500 196 IIPLCRELGIGIVPYSPLGR 215 (252)
Q Consensus 196 l~~~~~~~gi~v~a~spl~~ 215 (252)
+.+.|+++|+.++..+.+..
T Consensus 281 i~~~A~~~g~~~~~~~~~es 300 (366)
T 1tkk_A 281 INAMAEACGVECMVGSMIET 300 (366)
T ss_dssp HHHHHHHHTCCEEECCSSCC
T ss_pred HHHHHHHcCCcEEecCcccc
Confidence 99999999999998877643
|
| >2qgy_A Enolase from the environmental genome shotgun sequencing of the sargasso SEA; structural genomics, unknown function, PSI-2; 1.80A {Environmental sample} | Back alignment and structure |
|---|
Probab=94.51 E-value=2.2 Score=37.26 Aligned_cols=153 Identities=12% Similarity=0.103 Sum_probs=96.8
Q ss_pred CHHHHHHHHHHHHHCCCCEEeCcCCcC-CCcHHHHHHHHHhcCCCCCEEEEeccCccCCCCcccccCCChHHHHHHHHHH
Q 025500 39 SEEDGISMIKHAFSKGITFFDTADVYG-QNANEVLLGKALKQLPREKIQVATKFGIAGIGVAGVIVKGAPDYVRSCCEAS 117 (252)
Q Consensus 39 ~~~~~~~~l~~A~~~Gin~~Dta~~Yg-~g~se~~ig~~l~~~~R~~~~i~tK~~~~~~~~~~~~~~~~~~~i~~~~~~s 117 (252)
+.++..+....+.+.|++.|..-.... .....+.+ +++++.-..++.|..+... .++.+...+-++.
T Consensus 149 ~~~~~~~~a~~~~~~Gf~~vKik~g~~~~~~~~e~v-~avR~a~G~d~~l~vDan~----------~~~~~~a~~~~~~- 216 (391)
T 2qgy_A 149 DTNDYLRQIEKFYGKKYGGIKIYPMLDSLSISIQFV-EKVREIVGDELPLMLDLAV----------PEDLDQTKSFLKE- 216 (391)
T ss_dssp CHHHHHHHHHHHHHTTCSCEEECCCCSSHHHHHHHH-HHHHHHHCSSSCEEEECCC----------CSCHHHHHHHHHH-
T ss_pred CHHHHHHHHHHHHHcCCCEEEEccCCChHHHHHHHH-HHHHHHhCCCCEEEEEcCC----------CCCHHHHHHHHHH-
Confidence 678888888899999999988532111 01122333 3444411123334334321 2456665554444
Q ss_pred HHHcCCCcccEEEccCCCCCCCHHHHHHHHHHHHHcCCccEEEcc-CCCHHHHHHHhhcCCceEEeeecCccccchh-hh
Q 025500 118 LKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLS-EASPGTIRRAHAVHPITAVQMEWSLWTRDIE-EE 195 (252)
Q Consensus 118 L~~Lg~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~G~ir~iGvs-~~~~~~l~~~~~~~~~~~~q~~~~~~~~~~~-~~ 195 (252)
|+.++++++ ..|-.. +.|+.+.+++++-.|.-++-- -++.+.++++++....+++|+..+..-.-.+ ..
T Consensus 217 l~~~~i~~i-----EqP~~~----~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~~~d~v~ik~~~~GGit~~~~ 287 (391)
T 2qgy_A 217 VSSFNPYWI-----EEPVDG----ENISLLTEIKNTFNMKVVTGEKQSGLVHFRELISRNAADIFNPDISGMGGLIDIIE 287 (391)
T ss_dssp HGGGCCSEE-----ECSSCT----TCHHHHHHHHHHCSSCEEECTTCCSHHHHHHHHHTTCCSEECCBTTTSSCHHHHHH
T ss_pred HHhcCCCeE-----eCCCCh----hhHHHHHHHHhhCCCCEEEcCCcCCHHHHHHHHHcCCCCEEEECcchhCCHHHHHH
Confidence 777777654 444332 347777888877556544443 3678899999988889999998876543222 68
Q ss_pred HHHHHHHhCCeEEeccc
Q 025500 196 IIPLCRELGIGIVPYSP 212 (252)
Q Consensus 196 l~~~~~~~gi~v~a~sp 212 (252)
+.+.|+++|+.++..+.
T Consensus 288 i~~~A~~~gi~~~~~~~ 304 (391)
T 2qgy_A 288 ISNEASNNGIFISPHCW 304 (391)
T ss_dssp HHHHHHHTTCEECCBCC
T ss_pred HHHHHHHCCCEEeccCC
Confidence 99999999999998875
|
| >3gd6_A Muconate cycloisomerase; structural genomics, NYSGXRC, target 9375A, divergent enolase, lyase, PSI-2; 1.60A {Oceanobacillus iheyensis HTE831} PDB: 2oqy_A 3es8_A 3es7_A 3fyy_A 3hpf_A* | Back alignment and structure |
|---|
Probab=94.43 E-value=0.64 Score=40.86 Aligned_cols=158 Identities=8% Similarity=-0.021 Sum_probs=100.4
Q ss_pred CHHHHHHHHHHHHHCCCCEEeCcCCcCCCcHHHHHHHHHhcCCCCCEEEE-eccCccCCCCcccccCCChHHHHHHHHHH
Q 025500 39 SEEDGISMIKHAFSKGITFFDTADVYGQNANEVLLGKALKQLPREKIQVA-TKFGIAGIGVAGVIVKGAPDYVRSCCEAS 117 (252)
Q Consensus 39 ~~~~~~~~l~~A~~~Gin~~Dta~~Yg~g~se~~ig~~l~~~~R~~~~i~-tK~~~~~~~~~~~~~~~~~~~i~~~~~~s 117 (252)
+.++..+..+.+++.|++.|..--.... ..+...=+++++.-..++-|. ..... .++.+...+ +-+.
T Consensus 142 ~~e~~~~~a~~~~~~G~~~~KiKvG~~~-~~d~~~v~avR~a~g~~~~l~~vDan~----------~~~~~~A~~-~~~~ 209 (391)
T 3gd6_A 142 EVESNLDVVRQKLEQGFDVFRLYVGKNL-DADEEFLSRVKEEFGSRVRIKSYDFSH----------LLNWKDAHR-AIKR 209 (391)
T ss_dssp HHHHHHHHHHHHHHTTCCEEEEECSSCH-HHHHHHHHHHHHHHGGGCEEEEEECTT----------CSCHHHHHH-HHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEEeeCCCH-HHHHHHHHHHHHHcCCCCcEEEecCCC----------CcCHHHHHH-HHHH
Confidence 5688888889999999999885422211 122222245554211233333 33311 134444332 3345
Q ss_pred HHHcCCCcccEEEccCCCCCCCHHHHHHHHHHHHHcCCccEEEccCCCHHHHHHHhhcCCceEEeeecCccccch-hhhH
Q 025500 118 LKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPGTIRRAHAVHPITAVQMEWSLWTRDI-EEEI 196 (252)
Q Consensus 118 L~~Lg~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~G~ir~iGvs~~~~~~l~~~~~~~~~~~~q~~~~~~~~~~-~~~l 196 (252)
|+.+++ ++.++..|-... .++.+.+++++-.|.- |=+-++.+.++++++....+++|+..+..-.-. -..+
T Consensus 210 l~~~~i---~~~~iEqP~~~~----d~~~~~~l~~~~~iPI-dE~~~~~~~~~~~~~~~~~d~v~~k~~~~GGit~~~~i 281 (391)
T 3gd6_A 210 LTKYDL---GLEMIESPAPRN----DFDGLYQLRLKTDYPI-SEHVWSFKQQQEMIKKDAIDIFNISPVFIGGLTSAKKA 281 (391)
T ss_dssp HTTCCS---SCCEEECCSCTT----CHHHHHHHHHHCSSCE-EEECCCHHHHHHHHHHTCCSEEEECHHHHTSHHHHHHH
T ss_pred HHhcCC---CcceecCCCChh----hHHHHHHHHHHcCCCc-CCCCCCHHHHHHHHHcCCCCEEEECchhcCCHHHHHHH
Confidence 555554 335666664432 3677888888766665 888899999999998888999999876643221 2689
Q ss_pred HHHHHHhCCeEEecccCccc
Q 025500 197 IPLCRELGIGIVPYSPLGRG 216 (252)
Q Consensus 197 ~~~~~~~gi~v~a~spl~~G 216 (252)
.+.|+++|+.++..+.+.++
T Consensus 282 a~~A~~~gi~~~~~~~~es~ 301 (391)
T 3gd6_A 282 AYAAEVASKDVVLGTTQELS 301 (391)
T ss_dssp HHHHHHTTCEEEECCCCCCH
T ss_pred HHHHHHcCCEEEecCCCccH
Confidence 99999999999987766544
|
| >3jva_A Dipeptide epimerase; enolase superfamily, isomerase; 1.70A {Enterococcus faecalis V583} PDB: 3jw7_A* 3jzu_A* 3k1g_A* 3kum_A* | Back alignment and structure |
|---|
Probab=94.24 E-value=1.6 Score=37.69 Aligned_cols=154 Identities=9% Similarity=0.001 Sum_probs=97.2
Q ss_pred CHHHHHHHHHHHHHCCCCEEeCcCCcCCCcHHHHHHHHHhcCCCCCEEEEeccCccCCCCcccccCCChHHHHHHHHHHH
Q 025500 39 SEEDGISMIKHAFSKGITFFDTADVYGQNANEVLLGKALKQLPREKIQVATKFGIAGIGVAGVIVKGAPDYVRSCCEASL 118 (252)
Q Consensus 39 ~~~~~~~~l~~A~~~Gin~~Dta~~Yg~g~se~~ig~~l~~~~R~~~~i~tK~~~~~~~~~~~~~~~~~~~i~~~~~~sL 118 (252)
+.++..+..+.+++.|++.|-.--.... ..+...=+++++.-..++.+...... .++.+... +.+
T Consensus 139 ~~~~~~~~a~~~~~~G~~~~K~K~g~~~-~~d~~~v~avR~a~g~~~~l~vDan~----------~~~~~~a~----~~~ 203 (354)
T 3jva_A 139 EPNVMAQKAVEKVKLGFDTLKIKVGTGI-EADIARVKAIREAVGFDIKLRLDANQ----------AWTPKDAV----KAI 203 (354)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEEECCSCH-HHHHHHHHHHHHHHCTTSEEEEECTT----------CSCHHHHH----HHH
T ss_pred CHHHHHHHHHHHHHhCCCeEEEEeCCCH-HHHHHHHHHHHHHcCCCCeEEEECCC----------CCCHHHHH----HHH
Confidence 6788888888899999999885432111 12223334555521234444444321 13444332 334
Q ss_pred HHcCCCcccEEEccCCCCCCCHHHHHHHHHHHHHcCCccE-EEccCCCHHHHHHHhhcCCceEEeeecCccccchh-hhH
Q 025500 119 KRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKY-IGLSEASPGTIRRAHAVHPITAVQMEWSLWTRDIE-EEI 196 (252)
Q Consensus 119 ~~Lg~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~G~ir~-iGvs~~~~~~l~~~~~~~~~~~~q~~~~~~~~~~~-~~l 196 (252)
++|. ..++.++..|-... .++.+.+++++-.+.- .|=+-++.+.+.++++....+++|+..+..-.-.+ ..+
T Consensus 204 ~~L~--~~~i~~iEqP~~~~----d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~l~~~~~d~v~~k~~~~GGit~~~~i 277 (354)
T 3jva_A 204 QALA--DYQIELVEQPVKRR----DLEGLKYVTSQVNTTIMADESCFDAQDALELVKKGTVDVINIKLMKCGGIHEALKI 277 (354)
T ss_dssp HHTT--TSCEEEEECCSCTT----CHHHHHHHHHHCSSEEEESTTCCSHHHHHHHHHHTCCSEEEECHHHHTSHHHHHHH
T ss_pred HHHH--hcCCCEEECCCChh----hHHHHHHHHHhCCCCEEEcCCcCCHHHHHHHHHcCCCCEEEECchhcCCHHHHHHH
Confidence 4442 35677777775433 3667778877655543 33455888999999988889999998766433222 789
Q ss_pred HHHHHHhCCeEEecccC
Q 025500 197 IPLCRELGIGIVPYSPL 213 (252)
Q Consensus 197 ~~~~~~~gi~v~a~spl 213 (252)
.+.|+++|+.++..+.+
T Consensus 278 ~~~A~~~gi~~~~~~~~ 294 (354)
T 3jva_A 278 NQICETAGIECMIGCMA 294 (354)
T ss_dssp HHHHHHTTCEEEECCCT
T ss_pred HHHHHHcCCeEEecCCC
Confidence 99999999999988877
|
| >2qde_A Mandelate racemase/muconate lactonizing enzyme FA protein; PSI-II, NYSGXRC, enolase, structural genomics, protei structure initiative, PSI-2; 1.93A {Azoarcus SP} | Back alignment and structure |
|---|
Probab=94.24 E-value=0.57 Score=41.18 Aligned_cols=157 Identities=9% Similarity=0.048 Sum_probs=96.6
Q ss_pred CHHHHHHHHHHHHHCCCCEEeCcCCcCCCcHHHHHHHHHhcCCCCCEEEEeccCccCCCCcccccCCChHHHHHHHHHHH
Q 025500 39 SEEDGISMIKHAFSKGITFFDTADVYGQNANEVLLGKALKQLPREKIQVATKFGIAGIGVAGVIVKGAPDYVRSCCEASL 118 (252)
Q Consensus 39 ~~~~~~~~l~~A~~~Gin~~Dta~~Yg~g~se~~ig~~l~~~~R~~~~i~tK~~~~~~~~~~~~~~~~~~~i~~~~~~sL 118 (252)
+.++..+....+.+.|++.|..--........+.+ +++++.-..++.|...... .++.+...+-+ +.|
T Consensus 145 ~~e~~~~~a~~~~~~Gf~~vKik~g~~~~~~~e~v-~avR~a~g~d~~l~vDan~----------~~~~~~a~~~~-~~l 212 (397)
T 2qde_A 145 EPEAVAEEALAVLREGFHFVKLKAGGPLKADIAMV-AEVRRAVGDDVDLFIDING----------AWTYDQALTTI-RAL 212 (397)
T ss_dssp CHHHHHHHHHHHHHHTCSCEEEECCSCHHHHHHHH-HHHHHHHCTTSCEEEECTT----------CCCHHHHHHHH-HHH
T ss_pred CHHHHHHHHHHHHHhhhhheeecccCCHHHHHHHH-HHHHHhhCCCCEEEEECCC----------CCCHHHHHHHH-HHH
Confidence 56777888888899999988753211100122333 4555411123333333211 24566555443 367
Q ss_pred HHcCCCcccEEEccCCCCCCCHHHHHHHHHHHHHcCCccEEEc-cCCCHHHHHHHhhcCCceEEeeecCccccchh-hhH
Q 025500 119 KRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGL-SEASPGTIRRAHAVHPITAVQMEWSLWTRDIE-EEI 196 (252)
Q Consensus 119 ~~Lg~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~G~ir~iGv-s~~~~~~l~~~~~~~~~~~~q~~~~~~~~~~~-~~l 196 (252)
+.++++++ ..|-.. +.++.+.+++++-.|--++- +-++.+.++++++....+++|+..+..-.-.+ ..+
T Consensus 213 ~~~~i~~i-----EqP~~~----~~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~~~d~v~ik~~~~GGit~~~~i 283 (397)
T 2qde_A 213 EKYNLSKI-----EQPLPA----WDLDGMARLRGKVATPIYADESAQELHDLLAIINKGAADGLMIKTQKAGGLLKAQRW 283 (397)
T ss_dssp GGGCCSCE-----ECCSCT----TCHHHHHHHHTTCSSCEEESTTCCSHHHHHHHHHHTCCSEEEECHHHHTSHHHHHHH
T ss_pred HhCCCCEE-----ECCCCh----hhHHHHHHHHhhCCCCEEEeCCcCCHHHHHHHHHcCCCCEEEEeccccCCHHHHHHH
Confidence 77777654 455322 24777788887655554433 34678899999988889999998766432222 679
Q ss_pred HHHHHHhCCeEEecccCccc
Q 025500 197 IPLCRELGIGIVPYSPLGRG 216 (252)
Q Consensus 197 ~~~~~~~gi~v~a~spl~~G 216 (252)
.+.|+++|+.++..+-+.+|
T Consensus 284 ~~~A~~~g~~~~~~~~~es~ 303 (397)
T 2qde_A 284 LTLARLANLPVICGCMVGSG 303 (397)
T ss_dssp HHHHHHHTCCEEECCCSCCH
T ss_pred HHHHHHcCCeEEEecCcccH
Confidence 99999999999998755443
|
| >2o56_A Putative mandelate racemase; dehydratase, structural genomics, protein structure initiati 2; 2.00A {Salmonella typhimurium} | Back alignment and structure |
|---|
Probab=94.21 E-value=0.91 Score=39.98 Aligned_cols=154 Identities=10% Similarity=0.022 Sum_probs=97.2
Q ss_pred CHHHHHHHHHHHHHCCCCEEeCcCC----cCC------------Cc---HHHHHHHHHhcCCCCCEEEEeccCccCCCCc
Q 025500 39 SEEDGISMIKHAFSKGITFFDTADV----YGQ------------NA---NEVLLGKALKQLPREKIQVATKFGIAGIGVA 99 (252)
Q Consensus 39 ~~~~~~~~l~~A~~~Gin~~Dta~~----Yg~------------g~---se~~ig~~l~~~~R~~~~i~tK~~~~~~~~~ 99 (252)
+.++..+....+.+.|++.|..-.. +|. .. ..+.+ +++++.-..++.|......
T Consensus 152 ~~~~~~~~a~~~~~~Gf~~vKik~~~~~~~G~~~~s~~~~~~~~~~~~~~~e~v-~avR~a~G~d~~l~vDan~------ 224 (407)
T 2o56_A 152 EPEQYAQAALTAVSEGYDAIKVDTVAMDRHGNWNQQNLNGPLTDKILRLGYDRM-AAIRDAVGPDVDIIAEMHA------ 224 (407)
T ss_dssp SHHHHHHHHHHHHHTTCSEEEECCSSBCTTSCBSCSCCCSSCCHHHHHHHHHHH-HHHHHHHCTTSEEEEECTT------
T ss_pred CHHHHHHHHHHHHHcCCCEEEEcccccCCcCccccCcccCCCchhHHHHHHHHH-HHHHHhcCCCCEEEEECCC------
Confidence 5778888888999999999875321 121 00 11222 3334311234555544321
Q ss_pred ccccCCChHHHHHHHHHHHHHcCCCcccEEEccCCCCCCCHHHHHHHHHHHHHcCCccEEEccC-CCHHHHHHHhhcCCc
Q 025500 100 GVIVKGAPDYVRSCCEASLKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSE-ASPGTIRRAHAVHPI 178 (252)
Q Consensus 100 ~~~~~~~~~~i~~~~~~sL~~Lg~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~G~ir~iGvs~-~~~~~l~~~~~~~~~ 178 (252)
.++.+...+-++. |+.++++++ ..|-.. +.++.+.+++++-.|.-++--+ ++.+.++++++....
T Consensus 225 ----~~~~~~a~~~~~~-l~~~~i~~i-----E~P~~~----~~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~~~ 290 (407)
T 2o56_A 225 ----FTDTTSAIQFGRM-IEELGIFYY-----EEPVMP----LNPAQMKQVADKVNIPLAAGERIYWRWGYRPFLENGSL 290 (407)
T ss_dssp ----CSCHHHHHHHHHH-HGGGCCSCE-----ECSSCS----SSHHHHHHHHHHCCSCEEECTTCCHHHHHHHHHHTTCC
T ss_pred ----CCCHHHHHHHHHH-HHhcCCCEE-----eCCCCh----hhHHHHHHHHHhCCCCEEeCCCcCCHHHHHHHHHcCCC
Confidence 2456666555543 777777654 445332 2377778887775665444433 567889999988889
Q ss_pred eEEeeecCccccchh-hhHHHHHHHhCCeEEecccC
Q 025500 179 TAVQMEWSLWTRDIE-EEIIPLCRELGIGIVPYSPL 213 (252)
Q Consensus 179 ~~~q~~~~~~~~~~~-~~l~~~~~~~gi~v~a~spl 213 (252)
+++|+..+-.-.-.+ ..+.+.|+++|+.++..+..
T Consensus 291 d~v~ik~~~~GGite~~~i~~~A~~~g~~~~~h~~~ 326 (407)
T 2o56_A 291 SVIQPDICTCGGITEVKKICDMAHVYDKTVQIHVCG 326 (407)
T ss_dssp SEECCCTTTTTHHHHHHHHHHHHHTTTCEECCCCCS
T ss_pred CEEecCccccCCHHHHHHHHHHHHHcCCeEeecCCC
Confidence 999998876543222 68999999999999987764
|
| >2og9_A Mandelate racemase/muconate lactonizing enzyme; NYSGXRC, protein structure initiative (PSI) II, PSI-2, 9382A mandelate racemase; 1.90A {Polaromonas SP} PDB: 3cb3_A* | Back alignment and structure |
|---|
Probab=94.15 E-value=0.91 Score=39.84 Aligned_cols=152 Identities=9% Similarity=0.005 Sum_probs=95.9
Q ss_pred CHHHHHHHHHHHHHCCCCEEeCcCCcCCCc-HHHHHHHHHhc-C-CCCCEEEEeccCccCCCCcccccCCChHHHHHHHH
Q 025500 39 SEEDGISMIKHAFSKGITFFDTADVYGQNA-NEVLLGKALKQ-L-PREKIQVATKFGIAGIGVAGVIVKGAPDYVRSCCE 115 (252)
Q Consensus 39 ~~~~~~~~l~~A~~~Gin~~Dta~~Yg~g~-se~~ig~~l~~-~-~R~~~~i~tK~~~~~~~~~~~~~~~~~~~i~~~~~ 115 (252)
+.++..+....+.+.|++.|..--.-++-+ ..+.+ +++++ + +.-.+.| ... ..++.+...+-++
T Consensus 162 ~~e~~~~~a~~~~~~Gf~~vKik~g~~~~~~~~e~v-~avR~avg~d~~l~v--Dan----------~~~~~~~a~~~~~ 228 (393)
T 2og9_A 162 PIDQLMVNASASIERGIGGIKLKVGQPDGALDIARV-TAVRKHLGDAVPLMV--DAN----------QQWDRPTAQRMCR 228 (393)
T ss_dssp CHHHHHHHHHHHHHTTCCCEEEECCCSCHHHHHHHH-HHHHHHHCTTSCEEE--ECT----------TCCCHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEEecCCCCHHHHHHHH-HHHHHHcCCCCEEEE--ECC----------CCCCHHHHHHHHH
Confidence 577788888889999999887532111101 22333 55554 2 3333443 321 1246666655554
Q ss_pred HHHHHcCCCcccEEEccCCCCCCCHHHHHHHHHHHHHcCCccEEEc-cCCCHHHHHHHhhcCCceEEeeecCccccchh-
Q 025500 116 ASLKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGL-SEASPGTIRRAHAVHPITAVQMEWSLWTRDIE- 193 (252)
Q Consensus 116 ~sL~~Lg~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~G~ir~iGv-s~~~~~~l~~~~~~~~~~~~q~~~~~~~~~~~- 193 (252)
. |+.+++++++ .|-.. +.++.+.+++++-.|.-++. +-++.+.++++++....+++|+..+..-.-.+
T Consensus 229 ~-l~~~~i~~iE-----~P~~~----~~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~~~d~v~ik~~~~GGit~~ 298 (393)
T 2og9_A 229 I-FEPFNLVWIE-----EPLDA----YDHEGHAALALQFDTPIATGEMLTSAAEHGDLIRHRAADYLMPDAPRVGGITPF 298 (393)
T ss_dssp H-HGGGCCSCEE-----CCSCT----TCHHHHHHHHHHCSSCEEECTTCCSHHHHHHHHHTTCCSEECCCHHHHTSHHHH
T ss_pred H-HHhhCCCEEE-----CCCCc----ccHHHHHHHHHhCCCCEEeCCCcCCHHHHHHHHHCCCCCEEeeCccccCCHHHH
Confidence 4 7888877653 44322 24677778877755554443 34688999999988889999998765432212
Q ss_pred hhHHHHHHHhCCeEEecccC
Q 025500 194 EEIIPLCRELGIGIVPYSPL 213 (252)
Q Consensus 194 ~~l~~~~~~~gi~v~a~spl 213 (252)
..+.+.|+++|+.++..+..
T Consensus 299 ~~i~~~A~~~gi~~~~h~~~ 318 (393)
T 2og9_A 299 LKIASLAEHAGLMLAPHFAM 318 (393)
T ss_dssp HHHHHHHHHTTCEECCCSCH
T ss_pred HHHHHHHHHcCCEEeccCcc
Confidence 68999999999999866543
|
| >3eez_A Putative mandelate racemase/muconate lactonizing enzyme; structural genomics, unknown function, PSI-2, protein structure initiative; 2.80A {Silicibacter pomeroyi} | Back alignment and structure |
|---|
Probab=93.92 E-value=0.82 Score=39.96 Aligned_cols=154 Identities=7% Similarity=-0.020 Sum_probs=97.4
Q ss_pred CHHHHHHHHHHHHHCCCCEEeCcCCcCCCcHHHHHHHHHhcCCCCCEEEEeccCccCCCCcccccCCChHHHHHHHHHHH
Q 025500 39 SEEDGISMIKHAFSKGITFFDTADVYGQNANEVLLGKALKQLPREKIQVATKFGIAGIGVAGVIVKGAPDYVRSCCEASL 118 (252)
Q Consensus 39 ~~~~~~~~l~~A~~~Gin~~Dta~~Yg~g~se~~ig~~l~~~~R~~~~i~tK~~~~~~~~~~~~~~~~~~~i~~~~~~sL 118 (252)
+.++..+..+.+.+.|++.|..--.... ..+...=+++++.-..++.|..+.... ++.+...+ +-+.|
T Consensus 145 ~~e~~~~~a~~~~~~G~~~iKiK~G~~~-~~d~~~v~avR~a~g~~~~l~vDan~~----------~~~~~a~~-~~~~l 212 (378)
T 3eez_A 145 SVEETRAVIDRYRQRGYVAHSVKIGGDV-ERDIARIRDVEDIREPGEIVLYDVNRG----------WTRQQALR-VMRAT 212 (378)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEEECCSCH-HHHHHHHHHHTTSCCTTCEEEEECTTC----------CCHHHHHH-HHHHT
T ss_pred CHHHHHHHHHHHHhCCCCEEEeccCCCH-HHHHHHHHHHHHHcCCCceEEEECCCC----------CCHHHHHH-HHHHh
Confidence 6788888889999999999986432111 122223345665333455555554321 34443332 22334
Q ss_pred HHcCCCcccEEEccCCCCCCCHHHHHHHHHHHHHcCCccE-EEccCCCHHHHHHHhhcCCceEEeeecCccccch-hhhH
Q 025500 119 KRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKY-IGLSEASPGTIRRAHAVHPITAVQMEWSLWTRDI-EEEI 196 (252)
Q Consensus 119 ~~Lg~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~G~ir~-iGvs~~~~~~l~~~~~~~~~~~~q~~~~~~~~~~-~~~l 196 (252)
+.+ ++ ++..|-. .++.+.+++++-.+.- .|=+-++.+.++++++....+++|+..+..-.-. ...+
T Consensus 213 ~~~-----~i-~iEqP~~------~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~l~~~~~d~v~ik~~~~GGit~~~~i 280 (378)
T 3eez_A 213 EDL-----HV-MFEQPGE------TLDDIAAIRPLHSAPVSVDECLVTLQDAARVARDGLAEVFGIKLNRVGGLTRAARM 280 (378)
T ss_dssp GGG-----TC-CEECCSS------SHHHHHHTGGGCCCCEEECTTCCSHHHHHHHHHTTCCSEEEEEHHHHTSHHHHHHH
T ss_pred ccC-----Ce-EEecCCC------CHHHHHHHHhhCCCCEEECCCCCCHHHHHHHHHcCCCCEEEeCchhcCCHHHHHHH
Confidence 444 44 5566643 3677788877755543 3444588899999998888999999876643221 2789
Q ss_pred HHHHHHhCCeEEecccCccc
Q 025500 197 IPLCRELGIGIVPYSPLGRG 216 (252)
Q Consensus 197 ~~~~~~~gi~v~a~spl~~G 216 (252)
.+.|+++|+.++..+.+.++
T Consensus 281 a~~A~~~g~~~~~~~~~es~ 300 (378)
T 3eez_A 281 RDIALTHGIDMFVMATGGSV 300 (378)
T ss_dssp HHHHHHTTCEEEEECSSCSH
T ss_pred HHHHHHcCCEEEcCCCCCCH
Confidence 99999999999977665544
|
| >3dg3_A Muconate cycloisomerase; muconate lactonizing enzyme, muconolactone binding; 1.60A {Mycobacterium smegmatis} PDB: 3dg6_A* 3dg7_A* | Back alignment and structure |
|---|
Probab=93.87 E-value=1.2 Score=38.77 Aligned_cols=157 Identities=12% Similarity=0.079 Sum_probs=95.7
Q ss_pred CHHHHHHHHHHHHHC-CCCEEeCcCCcCCCcHHHHHHHHHhcCCCCCEEEEeccCccCCCCcccccCCChHHHHHHHHHH
Q 025500 39 SEEDGISMIKHAFSK-GITFFDTADVYGQNANEVLLGKALKQLPREKIQVATKFGIAGIGVAGVIVKGAPDYVRSCCEAS 117 (252)
Q Consensus 39 ~~~~~~~~l~~A~~~-Gin~~Dta~~Yg~g~se~~ig~~l~~~~R~~~~i~tK~~~~~~~~~~~~~~~~~~~i~~~~~~s 117 (252)
+.++..+..+.+++. |++.|-.--.......+...=+++++.-..++.|...... .++.+... .+-+.
T Consensus 139 ~~~~~~~~a~~~~~~~G~~~~K~K~g~~~~~~d~~~v~avR~a~g~~~~l~vDan~----------~~~~~~a~-~~~~~ 207 (367)
T 3dg3_A 139 DPVKMVAEAERIRETYGINTFKVKVGRRPVQLDTAVVRALRERFGDAIELYVDGNR----------GWSAAESL-RAMRE 207 (367)
T ss_dssp CHHHHHHHHHHHHHHHCCCEEEEECCCSSTHHHHHHHHHHHHHHGGGSEEEEECTT----------CSCHHHHH-HHHHH
T ss_pred CHHHHHHHHHHHHHhcCccEEEEeeCCChhhhHHHHHHHHHHHhCCCCEEEEECCC----------CCCHHHHH-HHHHH
Confidence 578888888889998 9998875432222212233334555411123333333211 13444333 23344
Q ss_pred HHHcCCCcccEEEccCCCCCCCHHHHHHHHHHHHHcCCccE-EEccCCCHHHHHHHhhcCCceEEeeecCccccchh-hh
Q 025500 118 LKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKY-IGLSEASPGTIRRAHAVHPITAVQMEWSLWTRDIE-EE 195 (252)
Q Consensus 118 L~~Lg~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~G~ir~-iGvs~~~~~~l~~~~~~~~~~~~q~~~~~~~~~~~-~~ 195 (252)
|+.++++ +++.|-... .++.+.+++++-.+.- .|=+-++.+.+.++++....+++|+..+.. .-.+ ..
T Consensus 208 l~~~~i~-----~iEqP~~~~----d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~~~d~v~~k~~~~-Git~~~~ 277 (367)
T 3dg3_A 208 MADLDLL-----FAEELCPAD----DVLSRRRLVGQLDMPFIADESVPTPADVTREVLGGSATAISIKTART-GFTGSTR 277 (367)
T ss_dssp TTTSCCS-----CEESCSCTT----SHHHHHHHHHHCSSCEEECTTCSSHHHHHHHHHHTSCSEEEECHHHH-TTHHHHH
T ss_pred HHHhCCC-----EEECCCCcc----cHHHHHHHHHhCCCCEEecCCcCCHHHHHHHHHcCCCCEEEeehhhh-hHHHHHH
Confidence 5555544 445664332 3667777877655543 344557889999998888899999987765 3222 67
Q ss_pred HHHHHHHhCCeEEecccCccc
Q 025500 196 IIPLCRELGIGIVPYSPLGRG 216 (252)
Q Consensus 196 l~~~~~~~gi~v~a~spl~~G 216 (252)
+.+.|+++|+.++..+.+.++
T Consensus 278 ia~~A~~~gi~~~~~~~~es~ 298 (367)
T 3dg3_A 278 VHHLAEGLGLDMVMGNQIDGQ 298 (367)
T ss_dssp HHHHHHHHTCEEEECCSSCCH
T ss_pred HHHHHHHcCCeEEECCcCCcH
Confidence 999999999999987655544
|
| >3i6e_A Muconate cycloisomerase I; structural genomics, NYSGXRC, targer 9468A, muconate lactonizing enzyme, PSI-2, protein structure initiative; 1.70A {Ruegeria pomeroyi} PDB: 3i6t_A | Back alignment and structure |
|---|
Probab=93.73 E-value=1.1 Score=39.15 Aligned_cols=157 Identities=10% Similarity=0.074 Sum_probs=96.8
Q ss_pred CHHHHHHHHHHHHHCCCCEEeCcCCcCCCcHHHHHHHHHhcCCCCCEEEEeccCccCCCCcccccCCChHHHHHHHHHHH
Q 025500 39 SEEDGISMIKHAFSKGITFFDTADVYGQNANEVLLGKALKQLPREKIQVATKFGIAGIGVAGVIVKGAPDYVRSCCEASL 118 (252)
Q Consensus 39 ~~~~~~~~l~~A~~~Gin~~Dta~~Yg~g~se~~ig~~l~~~~R~~~~i~tK~~~~~~~~~~~~~~~~~~~i~~~~~~sL 118 (252)
+.++..+..+.+++.|++.|-.--...+-..+...=+++++.- .++-|....... ++.+... .+-+.|
T Consensus 148 ~~~~~~~~a~~~~~~G~~~~K~Kvg~~~~~~d~~~v~avR~a~-~~~~l~vDan~~----------~~~~~A~-~~~~~L 215 (385)
T 3i6e_A 148 DFDADIALMERLRADGVGLIKLKTGFRDHAFDIMRLELIARDF-PEFRVRVDYNQG----------LEIDEAV-PRVLDV 215 (385)
T ss_dssp SHHHHHHHHHHHHHHTCCEEEEECSSSCHHHHHHHHHHHHHHC-TTSEEEEECTTC----------CCGGGHH-HHHHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEEecCCCCHHHHHHHHHHHHHhC-CCCeEEEECCCC----------CCHHHHH-HHHHHH
Confidence 5666677778888899998875432111012233334556522 555555554221 2333332 234556
Q ss_pred HHcCCCcccEEEccCCCCCCCHHHHHHHHHHHHHcCCcc-EEEccCCCHHHHHHHhhcCCceEEeeecCccccch-hhhH
Q 025500 119 KRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIK-YIGLSEASPGTIRRAHAVHPITAVQMEWSLWTRDI-EEEI 196 (252)
Q Consensus 119 ~~Lg~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~G~ir-~iGvs~~~~~~l~~~~~~~~~~~~q~~~~~~~~~~-~~~l 196 (252)
+.++++++ ..|-... .++.+.+++++-.+. ..|=+-++.+.+.++++....+++|+..+..-.-. -..+
T Consensus 216 ~~~~i~~i-----EqP~~~~----d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~~~~~~~d~v~~k~~~~GGit~~~~i 286 (385)
T 3i6e_A 216 AQFQPDFI-----EQPVRAH----HFELMARLRGLTDVPLLADESVYGPEDMVRAAHEGICDGVSIKIMKSGGLTRAQTV 286 (385)
T ss_dssp HTTCCSCE-----ECCSCTT----CHHHHHHHHTTCSSCEEESTTCCSHHHHHHHHHHTCCSEEEECHHHHTSHHHHHHH
T ss_pred HhcCCCEE-----ECCCCcc----cHHHHHHHHHhCCCCEEEeCCcCCHHHHHHHHHcCCCCEEEecccccCCHHHHHHH
Confidence 66666554 4554322 367778888764443 44555688899999998888999999876543211 2679
Q ss_pred HHHHHHhCCeEEecccCccc
Q 025500 197 IPLCRELGIGIVPYSPLGRG 216 (252)
Q Consensus 197 ~~~~~~~gi~v~a~spl~~G 216 (252)
.+.|+++|+.++..+.+.+|
T Consensus 287 ~~~A~~~gi~~~~~~~~es~ 306 (385)
T 3i6e_A 287 ARIAAAHGLMAYGGDMFEAG 306 (385)
T ss_dssp HHHHHHTTCEEEECCCSCCH
T ss_pred HHHHHHcCCEEEeCCCCccH
Confidence 99999999999876655544
|
| >1r0m_A N-acylamino acid racemase; isomerase; 1.30A {Deinococcus radiodurans} SCOP: c.1.11.2 d.54.1.1 PDB: 1xpy_A* 1xs2_A 2ggj_A 2ggi_A 2ggh_A* 2ggg_A* 2fkp_A | Back alignment and structure |
|---|
Probab=93.72 E-value=1.4 Score=38.28 Aligned_cols=152 Identities=12% Similarity=0.103 Sum_probs=93.8
Q ss_pred CHHHHHHHHHHHHHCCCCEEeCcCCcCCCcHHHHHHHHHhcCCCCCEEEEeccCccCCCCcccccCCChHHHHHHHHHHH
Q 025500 39 SEEDGISMIKHAFSKGITFFDTADVYGQNANEVLLGKALKQLPREKIQVATKFGIAGIGVAGVIVKGAPDYVRSCCEASL 118 (252)
Q Consensus 39 ~~~~~~~~l~~A~~~Gin~~Dta~~Yg~g~se~~ig~~l~~~~R~~~~i~tK~~~~~~~~~~~~~~~~~~~i~~~~~~sL 118 (252)
+.++..+....+.+.|++.|..-- +.....+.+ +++++.- .++.|...... .++.+. .+-+ +.|
T Consensus 148 ~~~~~~~~a~~~~~~G~~~iKik~--~~~~d~~~v-~avr~a~-~~~~l~vDan~----------~~~~~~-~~~~-~~l 211 (375)
T 1r0m_A 148 DEQATVDLVRRHVEQGYRRIKLKI--KPGWDVQPV-RATREAF-PDIRLTVDANS----------AYTLAD-AGRL-RQL 211 (375)
T ss_dssp SHHHHHHHHHHHHHTTCSCEEEEC--BTTBSHHHH-HHHHHHC-TTSCEEEECTT----------CCCGGG-HHHH-HTT
T ss_pred CHHHHHHHHHHHHHhcccEEEEec--ChHHHHHHH-HHHHHHc-CCCeEEEeCCC----------CCCHHH-HHHH-HHH
Confidence 567778888889999999877432 222234444 5555522 44444444311 134444 3333 336
Q ss_pred HHcCCCcccEEEccCCCCCCCHHHHHHHHHHHHHcCCcc-EEEccCCCHHHHHHHhhcCCceEEeeecCccccchh-hhH
Q 025500 119 KRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIK-YIGLSEASPGTIRRAHAVHPITAVQMEWSLWTRDIE-EEI 196 (252)
Q Consensus 119 ~~Lg~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~G~ir-~iGvs~~~~~~l~~~~~~~~~~~~q~~~~~~~~~~~-~~l 196 (252)
+.++++++ +.|-.. +.++.+.+++++-.|. ..|=+-++.+.++++++....+++|+..+..-.-.+ ..+
T Consensus 212 ~~~~i~~i-----EqP~~~----~d~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~i~~~~~d~v~ik~~~~GGit~~~~i 282 (375)
T 1r0m_A 212 DEYDLTYI-----EQPLAW----DDLVDHAELARRIRTPLCLDESVASASDARKALALGAGGVINLKVARVGGHAESRRV 282 (375)
T ss_dssp GGGCCSCE-----ECCSCT----TCSHHHHHHHHHCSSCEEESTTCCSHHHHHHHHHHTSCSEEEECTTTTTSHHHHHHH
T ss_pred HhCCCcEE-----ECCCCc----ccHHHHHHHHHhCCCCEEecCccCCHHHHHHHHHhCCCCEEEECcchhcCHHHHHHH
Confidence 66665554 455332 2366677777664443 333344788999999988889999998876543222 689
Q ss_pred HHHHHHhCCeEEecccCcc
Q 025500 197 IPLCRELGIGIVPYSPLGR 215 (252)
Q Consensus 197 ~~~~~~~gi~v~a~spl~~ 215 (252)
.+.|+++|+.++..+-+..
T Consensus 283 ~~~A~~~g~~~~~~~~~es 301 (375)
T 1r0m_A 283 HDVAQSFGAPVWCGGMLES 301 (375)
T ss_dssp HHHHHHTTCCEEECCCCCC
T ss_pred HHHHHHcCCcEEecCcccc
Confidence 9999999999766555443
|
| >2qdd_A Mandelate racemase/muconate lactonizing enzyme; enolase, structural genomics, PSI, protein structu initiative, nysgrc; 2.30A {Roseovarius nubinhibens} PDB: 3fvd_B | Back alignment and structure |
|---|
Probab=93.70 E-value=1 Score=39.21 Aligned_cols=153 Identities=8% Similarity=-0.025 Sum_probs=97.0
Q ss_pred CHHHHHHHHHHHHHCCCCEEeCcCCcCC-CcHHHHHHHHHhcCCCCCEEEEeccCccCCCCcccccCCChHHHHHHHHHH
Q 025500 39 SEEDGISMIKHAFSKGITFFDTADVYGQ-NANEVLLGKALKQLPREKIQVATKFGIAGIGVAGVIVKGAPDYVRSCCEAS 117 (252)
Q Consensus 39 ~~~~~~~~l~~A~~~Gin~~Dta~~Yg~-g~se~~ig~~l~~~~R~~~~i~tK~~~~~~~~~~~~~~~~~~~i~~~~~~s 117 (252)
+.++..+....+.+.|++.|..--.-++ ....+.+ +++++.-.+++.|..+... .++.+ ...+.
T Consensus 145 ~~e~~~~~a~~~~~~Gf~~iKik~g~~~~~~~~e~v-~avr~a~g~~~~l~vDan~----------~~~~~----~a~~~ 209 (378)
T 2qdd_A 145 TPDQMLGLIAEAAAQGYRTHSAKIGGSDPAQDIARI-EAISAGLPDGHRVTFDVNR----------AWTPA----IAVEV 209 (378)
T ss_dssp CHHHHHHHHHHHHHHTCCEEEEECCSSCHHHHHHHH-HHHHHSCCTTCEEEEECTT----------CCCHH----HHHHH
T ss_pred CHHHHHHHHHHHHHHhhhheeecCCCCChHHHHHHH-HHHHHHhCCCCEEEEeCCC----------CCCHH----HHHHH
Confidence 5677888888889999999985321111 0122333 4455422334555555421 13443 23345
Q ss_pred HHHcCCCcccEEEccCCCCCCCHHHHHHHHHHHHHcCCccEEEcc-CCCHHHHHHHhhcCCceEEeeecCccccchh-hh
Q 025500 118 LKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLS-EASPGTIRRAHAVHPITAVQMEWSLWTRDIE-EE 195 (252)
Q Consensus 118 L~~Lg~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~G~ir~iGvs-~~~~~~l~~~~~~~~~~~~q~~~~~~~~~~~-~~ 195 (252)
+++|. .++ ++..|-. .|+.+.+++++-.|--++-- -++.+.++++++....+++|+..+..-.-.+ ..
T Consensus 210 ~~~l~---~~i-~iEqP~~------d~~~~~~l~~~~~iPI~~dE~~~~~~~~~~~i~~~~~d~v~ik~~~~GGi~~~~~ 279 (378)
T 2qdd_A 210 LNSVR---ARD-WIEQPCQ------TLDQCAHVARRVANPIMLDECLHEFSDHLAAWSRGACEGVKIKPNRVGGLTRARQ 279 (378)
T ss_dssp HTSCC---CCC-EEECCSS------SHHHHHHHHTTCCSCEEECTTCCSHHHHHHHHHHTCCSEEEECHHHHTSHHHHHH
T ss_pred HHHhC---CCc-EEEcCCC------CHHHHHHHHHhCCCCEEECCCcCCHHHHHHHHHhCCCCEEEecccccCCHHHHHH
Confidence 56663 466 6766643 47788888877556544433 3678889999988889999998766433212 68
Q ss_pred HHHHHHHhCCeEEecccCccc
Q 025500 196 IIPLCRELGIGIVPYSPLGRG 216 (252)
Q Consensus 196 l~~~~~~~gi~v~a~spl~~G 216 (252)
+.+.|+++|+.++..+.+..+
T Consensus 280 i~~~A~~~g~~~~~~~~~es~ 300 (378)
T 2qdd_A 280 IRDFGVSVGWQMHIEDVGGTA 300 (378)
T ss_dssp HHHHHHHHTCEEEECCSSCCH
T ss_pred HHHHHHHcCCeEEecCCCCcH
Confidence 999999999999998655443
|
| >2p8b_A Mandelate racemase/muconate lactonizing enzyme family protein; enolase superfamily, prediction of function; HET: NSK; 1.70A {Bacillus cereus atcc 14579} PDB: 2p88_A* 2p8c_A* | Back alignment and structure |
|---|
Probab=93.69 E-value=0.87 Score=39.51 Aligned_cols=156 Identities=12% Similarity=0.071 Sum_probs=93.7
Q ss_pred CHHHHHHHHHHHHHCCCCEEeCcCCcCCCcHHHHHHHHHhcCCCCCEEEEeccCccCCCCcccccCCChHHHH-HHHHHH
Q 025500 39 SEEDGISMIKHAFSKGITFFDTADVYGQNANEVLLGKALKQLPREKIQVATKFGIAGIGVAGVIVKGAPDYVR-SCCEAS 117 (252)
Q Consensus 39 ~~~~~~~~l~~A~~~Gin~~Dta~~Yg~g~se~~ig~~l~~~~R~~~~i~tK~~~~~~~~~~~~~~~~~~~i~-~~~~~s 117 (252)
+.++..+....+.+.|++.|..--........+.+ +++++.-..++-|..+... .++.+... +-++ .
T Consensus 141 ~~~~~~~~a~~~~~~Gf~~iKik~g~~~~~~~e~v-~avr~a~g~~~~l~vDan~----------~~~~~~a~~~~~~-~ 208 (369)
T 2p8b_A 141 DPENMAEEAASMIQKGYQSFKMKVGTNVKEDVKRI-EAVRERVGNDIAIRVDVNQ----------GWKNSANTLTALR-S 208 (369)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEEECCSCHHHHHHHH-HHHHHHHCTTSEEEEECTT----------TTBSHHHHHHHHH-T
T ss_pred ChHHHHHHHHHHHHcCcCEEEEEeCCCHHHHHHHH-HHHHHHhCCCCeEEEECCC----------CCCHHHHHHHHHH-H
Confidence 56777888888999999999853211100112333 3444411124444444321 13344333 3332 3
Q ss_pred HHHcCCCcccEEEccCCCCCCCHHHHHHHHHHHHHcCCccEEEc-cCCCHHHHHHHhhcCCceEEeeecCccccchh-hh
Q 025500 118 LKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGL-SEASPGTIRRAHAVHPITAVQMEWSLWTRDIE-EE 195 (252)
Q Consensus 118 L~~Lg~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~G~ir~iGv-s~~~~~~l~~~~~~~~~~~~q~~~~~~~~~~~-~~ 195 (252)
|+.+++++ +..|-.. +.|+.+.+++++-.|.-++- +-++.+.++++++....+++|+..+-.-.-.+ ..
T Consensus 209 l~~~~i~~-----iEqP~~~----~d~~~~~~l~~~~~iPI~~dE~~~~~~~~~~~i~~~~~d~v~ik~~~~GGit~~~~ 279 (369)
T 2p8b_A 209 LGHLNIDW-----IEQPVIA----DDIDAMAHIRSKTDLPLMIDEGLKSSREMRQIIKLEAADKVNIKLMKCGGIYPAVK 279 (369)
T ss_dssp STTSCCSC-----EECCBCT----TCHHHHHHHHHTCCSCEEESTTCCSHHHHHHHHHHTCCSEEEECHHHHTSHHHHHH
T ss_pred HHhCCCcE-----EECCCCc----ccHHHHHHHHHhCCCCEEeCCCCCCHHHHHHHHHhCCCCEEEeecchhCCHHHHHH
Confidence 55555554 4455322 24777888888766654443 33688899999988889999998765432212 67
Q ss_pred HHHHHHHhCCeEEecccCcc
Q 025500 196 IIPLCRELGIGIVPYSPLGR 215 (252)
Q Consensus 196 l~~~~~~~gi~v~a~spl~~ 215 (252)
+.+.|+++|+.++..+.+..
T Consensus 280 i~~~A~~~g~~~~~~~~~es 299 (369)
T 2p8b_A 280 LAHQAEMAGIECQVGSMVES 299 (369)
T ss_dssp HHHHHHHTTCEEEECCSSCC
T ss_pred HHHHHHHcCCcEEecCCCcc
Confidence 99999999999988776543
|
| >2pp0_A L-talarate/galactarate dehydratase; enolase superfamily, LYA; 2.20A {Salmonella typhimurium} PDB: 2pp1_A* 2pp3_A* | Back alignment and structure |
|---|
Probab=93.59 E-value=1.3 Score=38.92 Aligned_cols=149 Identities=12% Similarity=0.006 Sum_probs=95.0
Q ss_pred CHHHHHHHHHHHHHCCCCEEeCcCCcCCCc---HHHHHHHHHhc-C-CCCCEEEEeccCccCCCCcccccCCChHHHHHH
Q 025500 39 SEEDGISMIKHAFSKGITFFDTADVYGQNA---NEVLLGKALKQ-L-PREKIQVATKFGIAGIGVAGVIVKGAPDYVRSC 113 (252)
Q Consensus 39 ~~~~~~~~l~~A~~~Gin~~Dta~~Yg~g~---se~~ig~~l~~-~-~R~~~~i~tK~~~~~~~~~~~~~~~~~~~i~~~ 113 (252)
+.++..+....+.+.|++.|..- -|.+. ..+.+ +++++ + +.-.+.| .... .++.+...+-
T Consensus 175 ~~e~~~~~a~~~~~~Gf~~vKik--~g~~~~~~d~e~v-~avR~avG~d~~l~v--Dan~----------~~~~~~ai~~ 239 (398)
T 2pp0_A 175 PLDQVLKNVVISRENGIGGIKLK--VGQPNCAEDIRRL-TAVREALGDEFPLMV--DANQ----------QWDRETAIRM 239 (398)
T ss_dssp CHHHHHHHHHHHHHTTCSCEEEE--CCCSCHHHHHHHH-HHHHHHHCSSSCEEE--ECTT----------CSCHHHHHHH
T ss_pred CHHHHHHHHHHHHHhCCCeEEEe--cCCCCHHHHHHHH-HHHHHHcCCCCeEEE--ECCC----------CCCHHHHHHH
Confidence 57778888888999999988752 22111 23333 45554 2 3333433 3311 2456666555
Q ss_pred HHHHHHHcCCCcccEEEccCCCCCCCHHHHHHHHHHHHHcCCccEEEc-cCCCHHHHHHHhhcCCceEEeeecCccccch
Q 025500 114 CEASLKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGL-SEASPGTIRRAHAVHPITAVQMEWSLWTRDI 192 (252)
Q Consensus 114 ~~~sL~~Lg~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~G~ir~iGv-s~~~~~~l~~~~~~~~~~~~q~~~~~~~~~~ 192 (252)
++. |+.++++++ ..|-.. +.++.+.+++++-.|.-++- +-++.+.++++++....+++|+..+-.-.-.
T Consensus 240 ~~~-l~~~~i~~i-----EqP~~~----~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~~~d~v~ik~~~~GGit 309 (398)
T 2pp0_A 240 GRK-MEQFNLIWI-----EEPLDA----YDIEGHAQLAAALDTPIATGEMLTSFREHEQLILGNASDFVQPDAPRVGGIS 309 (398)
T ss_dssp HHH-HGGGTCSCE-----ECCSCT----TCHHHHHHHHHHCSSCEEECTTCCSHHHHHHHHHTTCCSEECCCHHHHTSHH
T ss_pred HHH-HHHcCCcee-----eCCCCh----hhHHHHHHHHhhCCCCEEecCCcCCHHHHHHHHHcCCCCEEEeCccccCCHH
Confidence 544 787777654 455332 23777778877755554443 3468899999998888999999876543221
Q ss_pred h-hhHHHHHHHhCCeEEeccc
Q 025500 193 E-EEIIPLCRELGIGIVPYSP 212 (252)
Q Consensus 193 ~-~~l~~~~~~~gi~v~a~sp 212 (252)
+ ..+.+.|+++|+.++..+.
T Consensus 310 e~~~i~~~A~~~gi~~~~h~~ 330 (398)
T 2pp0_A 310 PFLKIMDLAAKHGRKLAPHFA 330 (398)
T ss_dssp HHHHHHHHHHHTTCEECCCSC
T ss_pred HHHHHHHHHHHcCCeEeecCc
Confidence 2 6899999999999986654
|
| >2poz_A Putative dehydratase; octamer, structural genomics, P protein structure initiative, NEW YORK SGX research center structural genomics, nysgxrc; 2.04A {Mesorhizobium loti} | Back alignment and structure |
|---|
Probab=93.57 E-value=1.6 Score=38.19 Aligned_cols=155 Identities=12% Similarity=0.102 Sum_probs=95.4
Q ss_pred CHHHHHHHHHHHHHCCCCEEeCcCC------------cCC-C--cHH--HHHHHHHhcCCCCCEEEEeccCccCCCCccc
Q 025500 39 SEEDGISMIKHAFSKGITFFDTADV------------YGQ-N--ANE--VLLGKALKQLPREKIQVATKFGIAGIGVAGV 101 (252)
Q Consensus 39 ~~~~~~~~l~~A~~~Gin~~Dta~~------------Yg~-g--~se--~~ig~~l~~~~R~~~~i~tK~~~~~~~~~~~ 101 (252)
+.++..+....+.+.|++.|..--. ||. . .-+ ..+=+++++.-..++.|......
T Consensus 137 ~~~~~~~~a~~~~~~Gf~~vKik~g~~~~g~~~~~~~~gg~~~~~~~~~~e~v~avr~a~G~d~~l~vD~n~-------- 208 (392)
T 2poz_A 137 TPDEFARAVERPLKEGYGALKFYPLAQRVGSALQHVTRRSMSAEAIELAYRRVKAVRDAAGPEIELMVDLSG-------- 208 (392)
T ss_dssp SHHHHHHHTHHHHHTTCSEEEECCCCEEETTEEECCBTTBCCHHHHHHHHHHHHHHHHHHCTTSEEEEECTT--------
T ss_pred CHHHHHHHHHHHHHcCCCEEEEecccccccccccccccCCcchhhHHHHHHHHHHHHHhcCCCCEEEEECCC--------
Confidence 6788888888899999998874321 220 0 001 11223334311234444444321
Q ss_pred ccCCChHHHHHHHHHHHHHcCCCcccEEEccCCCCCCCHHHHHHHHHHHHHcCCccEEEccC-CCHHHHHHHhhcCCceE
Q 025500 102 IVKGAPDYVRSCCEASLKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSE-ASPGTIRRAHAVHPITA 180 (252)
Q Consensus 102 ~~~~~~~~i~~~~~~sL~~Lg~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~G~ir~iGvs~-~~~~~l~~~~~~~~~~~ 180 (252)
.++.+...+-++. |+.++ +.++..|-.. +.++.+.+++++-.|.-++--+ ++.+.++++++....++
T Consensus 209 --~~~~~~a~~~~~~-l~~~~-----i~~iE~P~~~----~~~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~i~~~~~d~ 276 (392)
T 2poz_A 209 --GLTTDETIRFCRK-IGELD-----ICFVEEPCDP----FDNGALKVISEQIPLPIAVGERVYTRFGFRKIFELQACGI 276 (392)
T ss_dssp --CSCHHHHHHHHHH-HGGGC-----EEEEECCSCT----TCHHHHHHHHHHCSSCEEECTTCCHHHHHHHHHTTTCCSE
T ss_pred --CCCHHHHHHHHHH-HHhcC-----CCEEECCCCc----ccHHHHHHHHhhCCCCEEecCCcCCHHHHHHHHHcCCCCE
Confidence 2455555444433 55554 5566666433 2377778888776666554444 56788999998888999
Q ss_pred EeeecCccccchh-hhHHHHHHHhCCeEEecccC
Q 025500 181 VQMEWSLWTRDIE-EEIIPLCRELGIGIVPYSPL 213 (252)
Q Consensus 181 ~q~~~~~~~~~~~-~~l~~~~~~~gi~v~a~spl 213 (252)
+|+..+-.-.-.+ ..+.+.|+++|+.++..+.+
T Consensus 277 v~ik~~~~GGit~~~~i~~~A~~~g~~~~~h~~~ 310 (392)
T 2poz_A 277 IQPDIGTAGGLMETKKICAMAEAYNMRVAPHVCG 310 (392)
T ss_dssp ECCCTTTSSCHHHHHHHHHHHHTTTCEECCCCCS
T ss_pred EecCccccCCHHHHHHHHHHHHHcCCeEecCCCC
Confidence 9998876543222 68999999999999987765
|
| >2ps2_A Putative mandelate racemase/muconate lactonizing enzyme; structural genomics, NYSGXRC, target 9440A, enolase superfamily, PSI-2; 1.80A {Aspergillus oryzae RIB40} | Back alignment and structure |
|---|
Probab=93.56 E-value=0.82 Score=39.73 Aligned_cols=154 Identities=14% Similarity=-0.001 Sum_probs=96.1
Q ss_pred CHHHHHHHHHHHHHCCCCEEeCcCCcCCCcHHHHHHHHHhcCCCCCEEEEeccCccCCCCcccccCCChHHHHHHHHHHH
Q 025500 39 SEEDGISMIKHAFSKGITFFDTADVYGQNANEVLLGKALKQLPREKIQVATKFGIAGIGVAGVIVKGAPDYVRSCCEASL 118 (252)
Q Consensus 39 ~~~~~~~~l~~A~~~Gin~~Dta~~Yg~g~se~~ig~~l~~~~R~~~~i~tK~~~~~~~~~~~~~~~~~~~i~~~~~~sL 118 (252)
+.++..+....+.+.|++.|..--. ++-+....+=+++++.-.+++.|..+... .++.+... +.+
T Consensus 146 ~~~~~~~~a~~~~~~Gf~~iKik~g-~~~~~~~e~v~avr~a~g~~~~l~vDan~----------~~~~~~a~----~~~ 210 (371)
T 2ps2_A 146 EPEDMRARVAKYRAKGYKGQSVKIS-GEPVTDAKRITAALANQQPDEFFIVDANG----------KLSVETAL----RLL 210 (371)
T ss_dssp CHHHHHHHHHHHHTTTCCEEEEECC-SCHHHHHHHHHHHTTTCCTTCEEEEECTT----------BCCHHHHH----HHH
T ss_pred CHHHHHHHHHHHHHhChheEEeecC-CCHHHHHHHHHHHHHhcCCCCEEEEECCC----------CcCHHHHH----HHH
Confidence 5777888888899999999885211 11011222224455422345555555421 13444333 334
Q ss_pred HHc-CCCcccEEEccCCCCCCCHHHHHHHHHHHHHcCCccEEEccC-CCHHHHHHHhhcCCceEEeeecCccccchh-hh
Q 025500 119 KRL-DVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSE-ASPGTIRRAHAVHPITAVQMEWSLWTRDIE-EE 195 (252)
Q Consensus 119 ~~L-g~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~G~ir~iGvs~-~~~~~l~~~~~~~~~~~~q~~~~~~~~~~~-~~ 195 (252)
++| . ..++ ++..|-. .++.+.+++++-.|.-++--+ ++.+.++++++....+++|+..+..-.-.+ ..
T Consensus 211 ~~l~~--~~~i-~iE~P~~------~~~~~~~l~~~~~iPI~~dE~~~~~~~~~~~i~~~~~d~v~ik~~~~GGit~~~~ 281 (371)
T 2ps2_A 211 RLLPH--GLDF-ALEAPCA------TWRECISLRRKTDIPIIYDELATNEMSIVKILADDAAEGIDLKISKAGGLTRGRR 281 (371)
T ss_dssp HHSCT--TCCC-EEECCBS------SHHHHHHHHTTCCSCEEESTTCCSHHHHHHHHHHTCCSEEEEEHHHHTSHHHHHH
T ss_pred HHHHh--hcCC-cCcCCcC------CHHHHHHHHhhCCCCEEeCCCcCCHHHHHHHHHhCCCCEEEechhhcCCHHHHHH
Confidence 444 2 1244 5666643 477788888775665444433 678899999988889999998766433222 67
Q ss_pred HHHHHHHhCCeEEecccCccc
Q 025500 196 IIPLCRELGIGIVPYSPLGRG 216 (252)
Q Consensus 196 l~~~~~~~gi~v~a~spl~~G 216 (252)
+.+.|+++|+.++..+.+..+
T Consensus 282 i~~~A~~~g~~~~~~~~~es~ 302 (371)
T 2ps2_A 282 QRDICLAAGYSVSVQETCGSD 302 (371)
T ss_dssp HHHHHHHHTCEEEEECSSCCH
T ss_pred HHHHHHHcCCeEEecCCCcCH
Confidence 899999999999988776554
|
| >3fv9_G Mandelate racemase/muconate lactonizing enzyme; structural genomics, mandelate racemase/muconatelactonizing hydrolase, PSI-2; 1.90A {Roseovarius nubinhibens ism} PDB: 2pce_A | Back alignment and structure |
|---|
Probab=93.55 E-value=1.4 Score=38.56 Aligned_cols=156 Identities=10% Similarity=-0.071 Sum_probs=99.2
Q ss_pred CHHHHHHHHHHHHHCCCCEEeCcCCc----CCCcHHHHHHHHHhcCCCCCEEEEeccCccCCCCcccccCCChHHHHHHH
Q 025500 39 SEEDGISMIKHAFSKGITFFDTADVY----GQNANEVLLGKALKQLPREKIQVATKFGIAGIGVAGVIVKGAPDYVRSCC 114 (252)
Q Consensus 39 ~~~~~~~~l~~A~~~Gin~~Dta~~Y----g~g~se~~ig~~l~~~~R~~~~i~tK~~~~~~~~~~~~~~~~~~~i~~~~ 114 (252)
+.++..+..+.+.+.|++.|-.--.. ++-..+...=+++++.-..++-|....... ++.+. .
T Consensus 145 ~~e~~~~~a~~~~~~G~~~~K~Kvg~~~~~~~~~~d~~~v~avR~a~G~~~~L~vDaN~~----------~~~~~----A 210 (386)
T 3fv9_G 145 TPEAMRAKVARHRAQGFKGHSIKIGASEAEGGPALDAERITACLADRQPGEWYLADANNG----------LTVEH----A 210 (386)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEEECCCCTTTTHHHHHHHHHHHHTTTCCTTCEEEEECTTC----------CCHHH----H
T ss_pred CHHHHHHHHHHHHHCCCCEEEEeccCCCCCCCHHHHHHHHHHHHHHcCCCCeEEEECCCC----------CCHHH----H
Confidence 67888888899999999998753211 110122222345554323445555444221 34433 3
Q ss_pred HHHHHHcCCCcccEEEccCCCCCCCHHHHHHHHHHHHHcCCcc-EEEccCCCHHHHHHHhhcCCceEEeeecCccccchh
Q 025500 115 EASLKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIK-YIGLSEASPGTIRRAHAVHPITAVQMEWSLWTRDIE 193 (252)
Q Consensus 115 ~~sL~~Lg~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~G~ir-~iGvs~~~~~~l~~~~~~~~~~~~q~~~~~~~~~~~ 193 (252)
.+.+++|. +.+++ ++..|-. .++.+.+++++-.+. ..|=+-++.+.+.++++....+++|+..+..-.-.+
T Consensus 211 ~~~~~~l~-~~~~i-~iEeP~~------~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~~~~~a~d~v~~k~~~~GGit~ 282 (386)
T 3fv9_G 211 LRMLSLLP-PGLDI-VLEAPCA------SWAETKSLRARCALPLLLDELIQTETDLIAAIRDDLCDGVGLKVSKQGGITP 282 (386)
T ss_dssp HHHHHHSC-SSCCC-EEECCCS------SHHHHHHHHTTCCSCEEESTTCCSHHHHHHHHHTTCCSEEEEEHHHHTSHHH
T ss_pred HHHHHHhh-ccCCc-EEecCCC------CHHHHHHHHhhCCCCEEeCCCcCCHHHHHHHHHhCCCCEEEECccccCCHHH
Confidence 34556663 34577 7777754 266778887764443 445566888999999988889999998766432212
Q ss_pred -hhHHHHHHHhCCeEEecccCccc
Q 025500 194 -EEIIPLCRELGIGIVPYSPLGRG 216 (252)
Q Consensus 194 -~~l~~~~~~~gi~v~a~spl~~G 216 (252)
..+.+.|+++|+.++..+.+.++
T Consensus 283 ~~~i~~~A~~~gi~~~~~~~~es~ 306 (386)
T 3fv9_G 283 MLRQRAIAAAAGMVMSVQDTVGSQ 306 (386)
T ss_dssp HHHHHHHHHHTTCEEEEECSSCCH
T ss_pred HHHHHHHHHHcCCEEEeCCCCCCH
Confidence 67999999999999977665544
|
| >3q45_A Mandelate racemase/muconate lactonizing enzyme FA possible chloromuconate cycloisomerase...; (beta/alpha)8-barrel; 3.00A {Cytophaga hutchinsonii} PDB: 3q4d_A | Back alignment and structure |
|---|
Probab=93.42 E-value=1.2 Score=38.78 Aligned_cols=157 Identities=8% Similarity=0.002 Sum_probs=98.5
Q ss_pred CHHHHHHHHHHHHHCCCCEEeCcCCcCCCcHHHHHHHHHhcCCCCCEEEEeccCccCCCCcccccCCChHHHHHHHHHHH
Q 025500 39 SEEDGISMIKHAFSKGITFFDTADVYGQNANEVLLGKALKQLPREKIQVATKFGIAGIGVAGVIVKGAPDYVRSCCEASL 118 (252)
Q Consensus 39 ~~~~~~~~l~~A~~~Gin~~Dta~~Yg~g~se~~ig~~l~~~~R~~~~i~tK~~~~~~~~~~~~~~~~~~~i~~~~~~sL 118 (252)
+.++..+..+.+++.|++.|-.--.... ..+...=+++++.-..++.+...... .++.+...+ +-+.|
T Consensus 140 ~~e~~~~~a~~~~~~G~~~~K~KvG~~~-~~d~~~v~avR~~~g~~~~l~vDaN~----------~~~~~~A~~-~~~~l 207 (368)
T 3q45_A 140 EPHKMAADAVQIKKNGFEIIKVKVGGSK-ELDVERIRMIREAAGDSITLRIDANQ----------GWSVETAIE-TLTLL 207 (368)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEEECCSCH-HHHHHHHHHHHHHHCSSSEEEEECTT----------CBCHHHHHH-HHHHH
T ss_pred CHHHHHHHHHHHHHcCCCeEEEEecCCH-HHHHHHHHHHHHHhCCCCeEEEECCC----------CCChHHHHH-HHHHH
Confidence 5788888888899999999875432211 12233334555421233333333211 134544332 34566
Q ss_pred HHcCCCcccEEEccCCCCCCCHHHHHHHHHHHHHcCCcc-EEEccCCCHHHHHHHhhcCCceEEeeecCccccchh-hhH
Q 025500 119 KRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIK-YIGLSEASPGTIRRAHAVHPITAVQMEWSLWTRDIE-EEI 196 (252)
Q Consensus 119 ~~Lg~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~G~ir-~iGvs~~~~~~l~~~~~~~~~~~~q~~~~~~~~~~~-~~l 196 (252)
+.+++++++ .|-.. +.++.+.+++++-.+. ..|=+-++.+.+.++++....+++|+..+..-.-.+ ..+
T Consensus 208 ~~~~i~~iE-----qP~~~----~~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~~~~~~~d~v~~k~~~~GGit~~~~i 278 (368)
T 3q45_A 208 EPYNIQHCE-----EPVSR----NLYTALPKIRQACRIPIMADESCCNSFDAERLIQIQACDSFNLKLSKSAGITNALNI 278 (368)
T ss_dssp GGGCCSCEE-----CCBCG----GGGGGHHHHHHTCSSCEEESTTCCSHHHHHHHHHTTCCSEEEECTTTTTSHHHHHHH
T ss_pred hhcCCCEEE-----CCCCh----hHHHHHHHHHhhCCCCEEEcCCcCCHHHHHHHHHcCCCCeEEechhhcCCHHHHHHH
Confidence 777766554 44321 2466777887765444 334455889999999988889999999876543222 789
Q ss_pred HHHHHHhCCeEEecccCccc
Q 025500 197 IPLCRELGIGIVPYSPLGRG 216 (252)
Q Consensus 197 ~~~~~~~gi~v~a~spl~~G 216 (252)
.+.|+++|+.++..+.+.++
T Consensus 279 ~~~A~~~gi~~~~~~~~es~ 298 (368)
T 3q45_A 279 IRLAEQAHMPVQVGGFLESR 298 (368)
T ss_dssp HHHHHHTTCCEEECCSSCCH
T ss_pred HHHHHHcCCcEEecCccccH
Confidence 99999999999987776544
|
| >3s5s_A Mandelate racemase/muconate lactonizing enzyme FA protein; PSI-biology, structural genomics, NEW YORK structural genomi research consortium; 2.40A {Sorangium cellulosum} | Back alignment and structure |
|---|
Probab=93.39 E-value=1.1 Score=39.30 Aligned_cols=156 Identities=14% Similarity=0.040 Sum_probs=98.7
Q ss_pred CHHHHHHHHHHHHHCCCCEEeCcCCcC-CCcHHHHHHHHHhc-CCCCCEEEEeccCccCCCCcccccCCChHHHHHHHHH
Q 025500 39 SEEDGISMIKHAFSKGITFFDTADVYG-QNANEVLLGKALKQ-LPREKIQVATKFGIAGIGVAGVIVKGAPDYVRSCCEA 116 (252)
Q Consensus 39 ~~~~~~~~l~~A~~~Gin~~Dta~~Yg-~g~se~~ig~~l~~-~~R~~~~i~tK~~~~~~~~~~~~~~~~~~~i~~~~~~ 116 (252)
+.++..+..+.+++.|++.|=.--... .....+.+ +++++ .+..++.| -.- ..++.+... +
T Consensus 144 ~~e~~~~~a~~~~~~G~~~iKlKvg~~~~~~d~~~v-~avR~~~~~~~L~v--DaN----------~~w~~~~A~----~ 206 (389)
T 3s5s_A 144 SPERAEEAARRAAAMGFRALKVKVGGRLAASDPARI-EAIHAAAPGASLIL--DGN----------GGLTAGEAL----A 206 (389)
T ss_dssp CSHHHHHHHHHHHHHTCCEEEEECCGGGTTTHHHHH-HHHHHHCTTCEEEE--ECT----------TCSCHHHHH----H
T ss_pred CHHHHHHHHHHHHHcCCCeEEEEecCCChHHHHHHH-HHHHHhCCCCeEEE--ECC----------CCCCHHHHH----H
Confidence 457778888888999999876432111 11233334 45554 54333333 111 124444433 2
Q ss_pred HHHHcCCCcccEEEccCCCCCCCHHHHHHHHHHHHHcC-CccEEEccCCCHHHHHHHhhcCCceEEeeecCccccchh-h
Q 025500 117 SLKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEG-KIKYIGLSEASPGTIRRAHAVHPITAVQMEWSLWTRDIE-E 194 (252)
Q Consensus 117 sL~~Lg~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~G-~ir~iGvs~~~~~~l~~~~~~~~~~~~q~~~~~~~~~~~-~ 194 (252)
.+++|..+.+++.++..|-...+ ++.+.++.++- .--+.|=|-++...+.++++...++++|+..+. -.-.+ .
T Consensus 207 ~~~~L~~~~~~i~~iEeP~~~~d----~~~~~~l~~~~~iPIa~dEs~~~~~~~~~~i~~~a~d~v~~k~~~-GGit~~~ 281 (389)
T 3s5s_A 207 LVAHARRLGADVALLEQPVPRDD----WDGMKEVTRRAGVDVAADESAASAEDVLRVAAERAATVVNIKLMK-GGIAEAL 281 (389)
T ss_dssp HHHHHHHTTCEEEEEECCSCTTC----HHHHHHHHHHSSSCEEESTTCSSHHHHHHHHHTTCCSEEEECHHH-HHHHHHH
T ss_pred HHHHHhhCCCCeEEEECCCCccc----HHHHHHHHhhCCCCEEECCCCCCHHHHHHHHHcCCCCEEEecCCC-CCHHHHH
Confidence 34444213458999999865433 56667777653 334667677899999999988889999998877 32112 6
Q ss_pred hHHHHHHHhCCeEEecccCccc
Q 025500 195 EIIPLCRELGIGIVPYSPLGRG 216 (252)
Q Consensus 195 ~l~~~~~~~gi~v~a~spl~~G 216 (252)
.+.+.|+++|+.++..+.+.++
T Consensus 282 ~i~~~A~~~gi~~~~~~~~es~ 303 (389)
T 3s5s_A 282 DIAAVARAAGLGLMIGGMVESV 303 (389)
T ss_dssp HHHHHHHHTTCEEEECCSSCCH
T ss_pred HHHHHHHHcCCeEEecCCcccH
Confidence 7899999999999988876544
|
| >2gl5_A Putative dehydratase protein; structural genomics, protein structure initiati nysgxrc; 1.60A {Salmonella typhimurium} SCOP: c.1.11.2 d.54.1.1 PDB: 4e6m_A* | Back alignment and structure |
|---|
Probab=93.35 E-value=2.4 Score=37.24 Aligned_cols=154 Identities=10% Similarity=0.048 Sum_probs=95.3
Q ss_pred CHHHHHHHHHHHHHCCCCEEeCcCC----cCC------------C-----cHH--HHHHHHHhcCCCCCEEEEeccCccC
Q 025500 39 SEEDGISMIKHAFSKGITFFDTADV----YGQ------------N-----ANE--VLLGKALKQLPREKIQVATKFGIAG 95 (252)
Q Consensus 39 ~~~~~~~~l~~A~~~Gin~~Dta~~----Yg~------------g-----~se--~~ig~~l~~~~R~~~~i~tK~~~~~ 95 (252)
+.++..+....+.+.|++.|..-.. +|. | .-+ ..+=+++++.-..++.|......
T Consensus 150 ~~~~~~~~a~~~~~~Gf~~vKik~~~~~~~G~~~~~~~~~~~~GG~~~~~~~~~~~e~v~avR~a~G~d~~l~vDan~-- 227 (410)
T 2gl5_A 150 TPEEYAEAARAALDDGYDAIKVDPLEIDRNGDDCVFQNRNRNYSGLLLADQLKMGEARIAAMREAMGDDADIIVEIHS-- 227 (410)
T ss_dssp SHHHHHHHHHHHHHTTCSEEEECSSSBCTTSCBTTTSSCCGGGGSCCCHHHHHHHHHHHHHHHHHHCSSSEEEEECTT--
T ss_pred CHHHHHHHHHHHHHcCCCEEEEeccccCCcccccccccccccccCccchhHHHHHHHHHHHHHHhcCCCCEEEEECCC--
Confidence 6788888888999999999875321 121 0 001 11223334311234444444321
Q ss_pred CCCcccccCCChHHHHHHHHHHHHHcCCCcccEEEccCCCCCCCHHHHHHHHHHHHHcCCccEEEcc-CCCHHHHHHHhh
Q 025500 96 IGVAGVIVKGAPDYVRSCCEASLKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLS-EASPGTIRRAHA 174 (252)
Q Consensus 96 ~~~~~~~~~~~~~~i~~~~~~sL~~Lg~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~G~ir~iGvs-~~~~~~l~~~~~ 174 (252)
.++.+...+-++. |+.++ +.++..|-.. +.++.+.+++++-.|.-++-- -++.+.++++++
T Consensus 228 --------~~~~~~ai~~~~~-l~~~~-----i~~iE~P~~~----~~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~ 289 (410)
T 2gl5_A 228 --------LLGTNSAIQFAKA-IEKYR-----IFLYEEPIHP----LNSDNMQKVSRSTTIPIATGERSYTRWGYRELLE 289 (410)
T ss_dssp --------CSCHHHHHHHHHH-HGGGC-----EEEEECSSCS----SCHHHHHHHHHHCSSCEEECTTCCTTHHHHHHHH
T ss_pred --------CCCHHHHHHHHHH-HHhcC-----CCeEECCCCh----hhHHHHHHHHhhCCCCEEecCCcCCHHHHHHHHH
Confidence 2455555544433 56554 4566666433 237777888777556544433 367789999998
Q ss_pred cCCceEEeeecCccccchh-hhHHHHHHHhCCeEEeccc
Q 025500 175 VHPITAVQMEWSLWTRDIE-EEIIPLCRELGIGIVPYSP 212 (252)
Q Consensus 175 ~~~~~~~q~~~~~~~~~~~-~~l~~~~~~~gi~v~a~sp 212 (252)
....+++|+..+-.-.-.+ ..+.+.|+++|+.++..+.
T Consensus 290 ~~~~d~v~ik~~~~GGit~~~~ia~~A~~~gi~~~~h~~ 328 (410)
T 2gl5_A 290 KQSIAVAQPDLCLCGGITEGKKICDYANIYDTTVQVHVC 328 (410)
T ss_dssp TTCCSEECCCTTTTTHHHHHHHHHHHHHTTTCEECCCCC
T ss_pred cCCCCEEecCccccCCHHHHHHHHHHHHHcCCeEeecCC
Confidence 8889999998876543222 6899999999999998776
|
| >3bjs_A Mandelate racemase/muconate lactonizing enzyme; enolase, structural genomics, PSI-2, protein struc initiative; 2.70A {Polaromonas SP} | Back alignment and structure |
|---|
Probab=93.29 E-value=2.2 Score=37.86 Aligned_cols=151 Identities=7% Similarity=0.033 Sum_probs=93.6
Q ss_pred CH-HHHHHHHHHHHHCCCCEEeCcCCcCCCcHHHHHHHHHhcCCCCCEEEEeccCccCCCCcccccCCChHHHHHHHHHH
Q 025500 39 SE-EDGISMIKHAFSKGITFFDTADVYGQNANEVLLGKALKQLPREKIQVATKFGIAGIGVAGVIVKGAPDYVRSCCEAS 117 (252)
Q Consensus 39 ~~-~~~~~~l~~A~~~Gin~~Dta~~Yg~g~se~~ig~~l~~~~R~~~~i~tK~~~~~~~~~~~~~~~~~~~i~~~~~~s 117 (252)
+. ++..+....+.+.|++.|..--........+.+ +++++.-..++.|..... ..++.+...+-++.
T Consensus 184 ~~~e~~~~~a~~~~~~Gf~~vKik~g~~~~~d~e~v-~avR~avG~d~~l~vDan----------~~~~~~eai~~~~~- 251 (428)
T 3bjs_A 184 QPKESLAEEAQEYIARGYKALKLRIGDAARVDIERV-RHVRKVLGDEVDILTDAN----------TAYTMADARRVLPV- 251 (428)
T ss_dssp CCHHHHHHHHHHHHHHTCSEEEEECCSCHHHHHHHH-HHHHHHHCTTSEEEEECT----------TCCCHHHHHHHHHH-
T ss_pred ChHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHH-HHHHHhcCCCCEEEEECC----------CCCCHHHHHHHHHH-
Confidence 44 667777888889999988752111101122333 455541122444443331 12466666555544
Q ss_pred HHHcCCCcccEEEccCCCCCCCHHHHHHHHHHHHHcCC-ccEEE-ccCCCHHHHHHHhhcCCceEEeeecCccccchh-h
Q 025500 118 LKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGK-IKYIG-LSEASPGTIRRAHAVHPITAVQMEWSLWTRDIE-E 194 (252)
Q Consensus 118 L~~Lg~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~G~-ir~iG-vs~~~~~~l~~~~~~~~~~~~q~~~~~~~~~~~-~ 194 (252)
|+.++++++ ..|-.. +.++.+.+++++-. |--++ =+-++.+.++++++....+++|+..+-.-.-.+ .
T Consensus 252 L~~~~i~~i-----EqP~~~----~d~~~~~~l~~~~~~iPIa~dE~~~~~~~~~~~i~~~~~d~v~ik~~~~GGitea~ 322 (428)
T 3bjs_A 252 LAEIQAGWL-----EEPFAC----NDFASYREVAKITPLVPIAAGENHYTRFEFGQMLDAGAVQVWQPDLSKCGGITEGI 322 (428)
T ss_dssp HHHTTCSCE-----ECCSCT----TCHHHHHHHTTTCSSSCEEECTTCCSHHHHHHHHTTCCEEEECCBTTTSSCHHHHH
T ss_pred HHhcCCCEE-----ECCCCc----cCHHHHHHHHHhCCCCcEEcCCCcCCHHHHHHHHHhCCCCEEEeCccccCCHHHHH
Confidence 888887754 444322 23777777776644 44333 334678999999988889999998876543222 6
Q ss_pred hHHHHHHHhCCeEEec
Q 025500 195 EIIPLCRELGIGIVPY 210 (252)
Q Consensus 195 ~l~~~~~~~gi~v~a~ 210 (252)
.+.+.|+++|+.++..
T Consensus 323 ~ia~~A~~~gi~~~~~ 338 (428)
T 3bjs_A 323 RIAAMASAYRIPINAH 338 (428)
T ss_dssp HHHHHHHHTTCCBCCB
T ss_pred HHHHHHHHcCCeEEec
Confidence 8999999999998877
|
| >3r0u_A Enzyme of enolase superfamily; structural genomics, putative epimerase, PSI-biolog YORK structural genomics research consortium; HET: MSE TAR; 1.90A {Francisella philomiragia subsp} PDB: 3px5_A* 3r0k_A* 3r10_A 3r11_A 3r1z_A* | Back alignment and structure |
|---|
Probab=92.95 E-value=4.3 Score=35.35 Aligned_cols=159 Identities=11% Similarity=0.039 Sum_probs=98.7
Q ss_pred CHHHHHHHHHHHHHCCCCEEeCcCCcCCCcHHHHHHHHHhcCCCCCEEEEeccCccCCCCcccccCCChHHHHHHHHHHH
Q 025500 39 SEEDGISMIKHAFSKGITFFDTADVYGQNANEVLLGKALKQLPREKIQVATKFGIAGIGVAGVIVKGAPDYVRSCCEASL 118 (252)
Q Consensus 39 ~~~~~~~~l~~A~~~Gin~~Dta~~Yg~g~se~~ig~~l~~~~R~~~~i~tK~~~~~~~~~~~~~~~~~~~i~~~~~~sL 118 (252)
+.++..+..+.+++.|++.|-.--.... ..+...=+++++.-.+++-+...... .++.+...+ +-+.|
T Consensus 142 ~~e~~~~~a~~~~~~Gf~~~KlK~g~~~-~~d~~~v~avR~a~g~~~~L~vDaN~----------~w~~~~A~~-~~~~l 209 (379)
T 3r0u_A 142 NVAETIQNIQNGVEANFTAIKVKTGADF-NRDIQLLKALDNEFSKNIKFRFDANQ----------GWNLAQTKQ-FIEEI 209 (379)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEEECSSCH-HHHHHHHHHHHHHCCTTSEEEEECTT----------CCCHHHHHH-HHHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEeeecCCCH-HHHHHHHHHHHHhcCCCCeEEEeCCC----------CcCHHHHHH-HHHHH
Confidence 5778888888899999998875432211 12222334556522223333333211 234444332 22334
Q ss_pred HHcCCCcccEEEccCCCCCCCHHHHHHHHHHHHHcCC-ccEEEccCCCHHHHHHHhhcCCceEEeeecCccccchh-hhH
Q 025500 119 KRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGK-IKYIGLSEASPGTIRRAHAVHPITAVQMEWSLWTRDIE-EEI 196 (252)
Q Consensus 119 ~~Lg~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~G~-ir~iGvs~~~~~~l~~~~~~~~~~~~q~~~~~~~~~~~-~~l 196 (252)
+..+ .++.++..|-...+ ++.+.+++++-. --..|=+-++...+.++++....+++|+..+..-.-.+ ..+
T Consensus 210 ~~~~---~~l~~iEeP~~~~d----~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~a~d~v~~k~~~~GGi~~~~~i 282 (379)
T 3r0u_A 210 NKYS---LNVEIIEQPVKYYD----IKAMAEITKFSNIPVVADESVFDAKDAERVIDEQACNMINIKLAKTGGILEAQKI 282 (379)
T ss_dssp HTSC---CCEEEEECCSCTTC----HHHHHHHHHHCSSCEEESTTCSSHHHHHHHHHTTCCSEEEECHHHHTSHHHHHHH
T ss_pred hhcC---CCcEEEECCCCccc----HHHHHHHHhcCCCCEEeCCccCCHHHHHHHHHcCCCCEEEECccccCCHHHHHHH
Confidence 4411 46777877754333 566777776533 34556667889999999988889999998766432112 779
Q ss_pred HHHHHHhCCeEEecccCccc
Q 025500 197 IPLCRELGIGIVPYSPLGRG 216 (252)
Q Consensus 197 ~~~~~~~gi~v~a~spl~~G 216 (252)
.+.|+++|+.++..+.+..+
T Consensus 283 a~~A~~~gi~~~~~~~~es~ 302 (379)
T 3r0u_A 283 KKLADSAGISCMVGCMMESP 302 (379)
T ss_dssp HHHHHHTTCEEEECCCSCCH
T ss_pred HHHHHHcCCEEEEeCCCccH
Confidence 99999999999988776544
|
| >2zc8_A N-acylamino acid racemase; octamer, TIM beta/alpha-barrel, metal-binding, metal binding; 1.95A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=92.91 E-value=1.1 Score=38.82 Aligned_cols=152 Identities=16% Similarity=0.119 Sum_probs=92.6
Q ss_pred CHHHHHHHHHHHHHCCCCEEeCcCCcCCCcHHHHHHHHHhc-CCCCCEEEEeccCccCCCCcccccCCChHHHHHHHHHH
Q 025500 39 SEEDGISMIKHAFSKGITFFDTADVYGQNANEVLLGKALKQ-LPREKIQVATKFGIAGIGVAGVIVKGAPDYVRSCCEAS 117 (252)
Q Consensus 39 ~~~~~~~~l~~A~~~Gin~~Dta~~Yg~g~se~~ig~~l~~-~~R~~~~i~tK~~~~~~~~~~~~~~~~~~~i~~~~~~s 117 (252)
+.++..+....+.+.|++.|..-- +.....+.+ +++++ . .++.|...... .++.+. .+ +-+.
T Consensus 141 ~~~~~~~~a~~~~~~G~~~iKik~--~~~~d~~~v-~avr~a~--~~~~l~vDan~----------~~~~~~-~~-~~~~ 203 (369)
T 2zc8_A 141 SVEDTLRVVERHLEEGYRRIKLKI--KPGWDYEVL-KAVREAF--PEATLTADANS----------AYSLAN-LA-QLKR 203 (369)
T ss_dssp SHHHHHHHHHHHHHTTCSCEEEEC--BTTBSHHHH-HHHHHHC--TTSCEEEECTT----------CCCGGG-HH-HHHG
T ss_pred CHHHHHHHHHHHHHhhhheeeeec--ChhHHHHHH-HHHHHHc--CCCeEEEecCC----------CCCHHH-HH-HHHH
Confidence 567778888888999999877421 222234444 55555 4 34333333211 134444 33 3334
Q ss_pred HHHcCCCcccEEEccCCCCCCCHHHHHHHHHHHHHcCCccE-EEccCCCHHHHHHHhhcCCceEEeeecCccccchh-hh
Q 025500 118 LKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKY-IGLSEASPGTIRRAHAVHPITAVQMEWSLWTRDIE-EE 195 (252)
Q Consensus 118 L~~Lg~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~G~ir~-iGvs~~~~~~l~~~~~~~~~~~~q~~~~~~~~~~~-~~ 195 (252)
|+.++++++ ..|-.. +.++.+.+++++-.|.- .|=+-++.+.++++++....+++|+..+..-.-.+ ..
T Consensus 204 l~~~~i~~i-----EqP~~~----~d~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~i~~~~~d~v~ik~~~~GGit~~~~ 274 (369)
T 2zc8_A 204 LDELRLDYI-----EQPLAY----DDLLDHAKLQRELSTPICLDESLTGAEKARKAIELGAGRVFNVKPARLGGHGESLR 274 (369)
T ss_dssp GGGGCCSCE-----ECCSCT----TCSHHHHHHHHHCSSCEEESTTCCSHHHHHHHHHHTCCSEEEECHHHHTSHHHHHH
T ss_pred HHhCCCcEE-----ECCCCc----ccHHHHHHHHhhCCCCEEEcCccCCHHHHHHHHHhCCCCEEEEchhhhCCHHHHHH
Confidence 666665554 455332 23566677776644443 33344788999999988889999998765432212 68
Q ss_pred HHHHHHHhCCeEEecccCccc
Q 025500 196 IIPLCRELGIGIVPYSPLGRG 216 (252)
Q Consensus 196 l~~~~~~~gi~v~a~spl~~G 216 (252)
+.+.|+++|+.++..+-+..|
T Consensus 275 i~~~A~~~g~~~~~~~~~es~ 295 (369)
T 2zc8_A 275 VHALAESAGIPLWMGGMLEAG 295 (369)
T ss_dssp HHHHHHHTTCCEEECCCCCCH
T ss_pred HHHHHHHcCCcEEecCccccH
Confidence 999999999997665555433
|
| >3mwc_A Mandelate racemase/muconate lactonizing protein; enolase, structural genomics, protein structure initiative, nysgrc; 1.80A {Kosmotoga olearia} | Back alignment and structure |
|---|
Probab=92.82 E-value=1 Score=39.66 Aligned_cols=151 Identities=10% Similarity=-0.024 Sum_probs=97.3
Q ss_pred HHHHHHHHHHHHHCCCCEEeCcCCcCCCcHHHHHHHHHhc-C-CCCCEEEEeccCccCCCCcccccCCChHHHHHHHHHH
Q 025500 40 EEDGISMIKHAFSKGITFFDTADVYGQNANEVLLGKALKQ-L-PREKIQVATKFGIAGIGVAGVIVKGAPDYVRSCCEAS 117 (252)
Q Consensus 40 ~~~~~~~l~~A~~~Gin~~Dta~~Yg~g~se~~ig~~l~~-~-~R~~~~i~tK~~~~~~~~~~~~~~~~~~~i~~~~~~s 117 (252)
.++..+..+.+++.|++.|..-- +.....+.+ +++++ . +.-.+.| .... .++.+. . .+-+.
T Consensus 164 ~e~~~~~a~~~~~~G~~~iKlKv--~~~~d~~~v-~avR~a~G~~~~L~v--DaN~----------~w~~~~-~-~~~~~ 226 (400)
T 3mwc_A 164 IETLIHQVEESLQEGYRRIKIKI--KPGWDVEPL-QETRRAVGDHFPLWT--DANS----------SFELDQ-W-ETFKA 226 (400)
T ss_dssp HHHHHHHHHHHHHHTCSCEEEEC--BTTBSHHHH-HHHHHHHCTTSCEEE--ECTT----------CCCGGG-H-HHHHH
T ss_pred HHHHHHHHHHHHHcCCCEEEEEe--CcchHHHHH-HHHHHhcCCCCEEEE--eCCC----------CCCHHH-H-HHHHH
Confidence 78888889999999999887532 222233444 44554 2 4444554 2211 134444 2 33456
Q ss_pred HHHcCCCcccEEEccCCCCCCCHHHHHHHHHHHHHcCCcc-EEEccCCCHHHHHHHhhcCCceEEeeecCccccchh-hh
Q 025500 118 LKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIK-YIGLSEASPGTIRRAHAVHPITAVQMEWSLWTRDIE-EE 195 (252)
Q Consensus 118 L~~Lg~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~G~ir-~iGvs~~~~~~l~~~~~~~~~~~~q~~~~~~~~~~~-~~ 195 (252)
|+.++++++ ..|-... .++.+.+++++-.|. ..|=+-++.+.+.++++....+++|+..+..-.-.+ ..
T Consensus 227 l~~~~i~~i-----EqP~~~~----d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~~~~~~~d~v~~k~~~~GGit~~~~ 297 (400)
T 3mwc_A 227 MDAAKCLFH-----EQPLHYE----ALLDLKELGERIETPICLDESLISSRVAEFVAKLGISNIWNIKIQRVGGLLEAIK 297 (400)
T ss_dssp HGGGCCSCE-----ESCSCTT----CHHHHHHHHHHSSSCEEESTTCCSHHHHHHHHHTTCCSEEEECHHHHTSHHHHHH
T ss_pred HHhcCCCEE-----eCCCChh----hHHHHHHHHhhCCCCEEEeCCcCCHHHHHHHHhcCCCCEEEEcchhhCCHHHHHH
Confidence 777776554 4553322 367777887764443 445566889999999988889999998766432212 78
Q ss_pred HHHHHHHhCCeEEecccCccc
Q 025500 196 IIPLCRELGIGIVPYSPLGRG 216 (252)
Q Consensus 196 l~~~~~~~gi~v~a~spl~~G 216 (252)
+.+.|+++|+.++..+.+..|
T Consensus 298 ia~~A~~~gi~~~~~~~~es~ 318 (400)
T 3mwc_A 298 IYKIATDNGIKLWGGTMPESG 318 (400)
T ss_dssp HHHHHHHTTCEEEECCSCCCH
T ss_pred HHHHHHHcCCEEEecCCCCCH
Confidence 999999999999887755443
|
| >1sjd_A N-acylamino acid racemase; lyase, isomerase; HET: NPG; 1.87A {Amycolatopsis SP} SCOP: c.1.11.2 d.54.1.1 PDB: 1sja_A* 1sjb_A* 1sjc_A* | Back alignment and structure |
|---|
Probab=92.78 E-value=4.1 Score=35.16 Aligned_cols=152 Identities=11% Similarity=0.021 Sum_probs=93.4
Q ss_pred CHHHHHHHHHHHHHCCCCEEeCcCCcCCCcHHHHHHHHHhc-C-CCCCEEEEeccCccCCCCcccccCCChHHHHHHHHH
Q 025500 39 SEEDGISMIKHAFSKGITFFDTADVYGQNANEVLLGKALKQ-L-PREKIQVATKFGIAGIGVAGVIVKGAPDYVRSCCEA 116 (252)
Q Consensus 39 ~~~~~~~~l~~A~~~Gin~~Dta~~Yg~g~se~~ig~~l~~-~-~R~~~~i~tK~~~~~~~~~~~~~~~~~~~i~~~~~~ 116 (252)
+.++..+....+.+.|++.|..-- +.....+.+. ++++ . +.-.+.|-..- .++.+. .+- -+
T Consensus 141 ~~~~~~~~a~~~~~~Gf~~vKik~--~~~~~~e~v~-avr~~~g~~~~l~vDan~------------~~~~~~-~~~-~~ 203 (368)
T 1sjd_A 141 TIPQLLDVVGGYLDEGYVRIKLKI--EPGWDVEPVR-AVRERFGDDVLLQVDANT------------AYTLGD-APQ-LA 203 (368)
T ss_dssp CHHHHHHHHHHHHHHTCSEEEEEC--BTTBSHHHHH-HHHHHHCTTSEEEEECTT------------CCCGGG-HHH-HH
T ss_pred CHHHHHHHHHHHHHhCccEEEEec--CchhHHHHHH-HHHHhcCCCceEEEeccC------------CCCHHH-HHH-HH
Confidence 567778888888999999887421 2222344443 4443 2 32333332211 134555 333 33
Q ss_pred HHHHcCCCcccEEEccCCCCCCCHHHHHHHHHHHHHcCCccEEE-ccCCCHHHHHHHhhcCCceEEeeecCccccchh-h
Q 025500 117 SLKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIG-LSEASPGTIRRAHAVHPITAVQMEWSLWTRDIE-E 194 (252)
Q Consensus 117 sL~~Lg~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~G~ir~iG-vs~~~~~~l~~~~~~~~~~~~q~~~~~~~~~~~-~ 194 (252)
.|+.+++++ +..|-.. +.++.+.+++++-.|.-.+ =+-++.+.++++++....+++|+..+..-.-.+ .
T Consensus 204 ~l~~~~i~~-----iE~P~~~----~~~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~i~~~~~d~v~ik~~~~GGit~~~ 274 (368)
T 1sjd_A 204 RLDPFGLLL-----IEQPLEE----EDVLGHAELARRIQTPICLDESIVSARAAADAIKLGAVQIVNIKPGRVGGYLEAR 274 (368)
T ss_dssp TTGGGCCSE-----EECCSCT----TCHHHHHHHHTTCSSCEEESTTCCSHHHHHHHHHTTCCSEEEECTTTTTSHHHHH
T ss_pred HHHhcCCCe-----EeCCCCh----hhHHHHHHHHHhCCCCEEECCCcCCHHHHHHHHHcCCCCEEEecccccCCHHHHH
Confidence 367666654 4555332 2377778887765554333 334788999999988889999998876543222 7
Q ss_pred hHHHHHHHhCCeEEecccCccc
Q 025500 195 EIIPLCRELGIGIVPYSPLGRG 216 (252)
Q Consensus 195 ~l~~~~~~~gi~v~a~spl~~G 216 (252)
.+.+.|+++|+.++..+-+..|
T Consensus 275 ~i~~~A~~~g~~~~~~~~~es~ 296 (368)
T 1sjd_A 275 RVHDVCAAHGIPVWCGGMIETG 296 (368)
T ss_dssp HHHHHHHHTTCCEEECCCCCCH
T ss_pred HHHHHHHHcCCcEEeCCccccH
Confidence 8999999999997665554433
|
| >1rvk_A Isomerase/lactonizing enzyme; enolase superfamily, MR.GI-17937161, NYSGXRC, target T1522, structural genomics, PSI; 1.70A {Agrobacterium tumefaciens} SCOP: c.1.11.2 d.54.1.1 | Back alignment and structure |
|---|
Probab=92.76 E-value=2.8 Score=36.43 Aligned_cols=151 Identities=10% Similarity=-0.013 Sum_probs=94.6
Q ss_pred CHHHHHHHHHHHHHCCCCEEeCcCC--c-CC--C-c-HHHHHHHHHhcCCCCCEEEEeccCccCCCCcccccCCChHHHH
Q 025500 39 SEEDGISMIKHAFSKGITFFDTADV--Y-GQ--N-A-NEVLLGKALKQLPREKIQVATKFGIAGIGVAGVIVKGAPDYVR 111 (252)
Q Consensus 39 ~~~~~~~~l~~A~~~Gin~~Dta~~--Y-g~--g-~-se~~ig~~l~~~~R~~~~i~tK~~~~~~~~~~~~~~~~~~~i~ 111 (252)
+.++..+....+.+.|++.|..--. | +. . + ..+.+ +++++.-..++.|..+... .++.+...
T Consensus 149 ~~e~~~~~a~~~~~~Gf~~iKik~g~~~~~~~~~~~~~~e~v-~avr~a~g~d~~l~vDan~----------~~~~~~a~ 217 (382)
T 1rvk_A 149 TPEDYGRFAETLVKRGYKGIKLHTWMPPVSWAPDVKMDLKAC-AAVREAVGPDIRLMIDAFH----------WYSRTDAL 217 (382)
T ss_dssp SHHHHHHHHHHHHHHTCSEEEEECCCTTSTTCCCHHHHHHHH-HHHHHHHCTTSEEEEECCT----------TCCHHHHH
T ss_pred CHHHHHHHHHHHHHCCCCEEEEcCCcCccccccchHHHHHHH-HHHHHHhCCCCeEEEECCC----------CCCHHHHH
Confidence 6788888888899999999874211 1 10 0 1 12333 4444411234444444421 24565555
Q ss_pred HHHHHHHHHcCCCcccEEEccCCCCCCCHHHHHHHHHHHHHcCCccEEEcc-CCC-HHHHHHHhhcCCceEEeeecCccc
Q 025500 112 SCCEASLKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLS-EAS-PGTIRRAHAVHPITAVQMEWSLWT 189 (252)
Q Consensus 112 ~~~~~sL~~Lg~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~G~ir~iGvs-~~~-~~~l~~~~~~~~~~~~q~~~~~~~ 189 (252)
+-+ +.|+.+++++ +..|-.. +.++.+.+++++-.|.-++-- -++ .+.++++++....+++|+..+-.-
T Consensus 218 ~~~-~~l~~~~i~~-----iE~P~~~----~~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~~i~~~~~d~v~ik~~~~G 287 (382)
T 1rvk_A 218 ALG-RGLEKLGFDW-----IEEPMDE----QSLSSYKWLSDNLDIPVVGPESAAGKHWHRAEWIKAGACDILRTGVNDVG 287 (382)
T ss_dssp HHH-HHHHTTTCSE-----EECCSCT----TCHHHHHHHHHHCSSCEEECSSCSSHHHHHHHHHHTTCCSEEEECHHHHT
T ss_pred HHH-HHHHhcCCCE-----EeCCCCh----hhHHHHHHHHhhCCCCEEEeCCccCcHHHHHHHHHcCCCCEEeeCchhcC
Confidence 444 4577777654 4455332 247777888776555544433 367 889999998888999999876543
Q ss_pred cchh-hhHHHHHHHhCCeEEec
Q 025500 190 RDIE-EEIIPLCRELGIGIVPY 210 (252)
Q Consensus 190 ~~~~-~~l~~~~~~~gi~v~a~ 210 (252)
.-.+ ..+.+.|+++|+.++..
T Consensus 288 Git~~~~i~~~A~~~g~~~~~~ 309 (382)
T 1rvk_A 288 GITPALKTMHLAEAFGMECEVH 309 (382)
T ss_dssp SHHHHHHHHHHHHHTTCCEEEC
T ss_pred CHHHHHHHHHHHHHcCCeEeec
Confidence 2212 68999999999999988
|
| >2ox4_A Putative mandelate racemase; enolase, dehydratase, structural genomics, protein structure initiative, PSI, nysgrc; 1.80A {Zymomonas mobilis} | Back alignment and structure |
|---|
Probab=92.66 E-value=3.1 Score=36.41 Aligned_cols=154 Identities=9% Similarity=0.047 Sum_probs=95.9
Q ss_pred CHHHHHHHHHHHHHCCCCEEeCcCC----cCC--------C----c---HHHHHHHHHhcCCCCCEEEEeccCccCCCCc
Q 025500 39 SEEDGISMIKHAFSKGITFFDTADV----YGQ--------N----A---NEVLLGKALKQLPREKIQVATKFGIAGIGVA 99 (252)
Q Consensus 39 ~~~~~~~~l~~A~~~Gin~~Dta~~----Yg~--------g----~---se~~ig~~l~~~~R~~~~i~tK~~~~~~~~~ 99 (252)
+.++..+....+.+.|++.|..-.. +|. . . ..+.+ +++++.-..++.|......
T Consensus 146 ~~e~~~~~a~~~~~~Gf~~vKik~~~~~~~G~~~~s~~~g~~~~~~~~~~~e~v-~avr~avG~d~~l~vDan~------ 218 (403)
T 2ox4_A 146 RKEEYAEEALKAVAEGYDAVKVDVLAHDRNGSREGVFLEGPLPSETIKIGVERV-EAIRNAVGPDVDIIVENHG------ 218 (403)
T ss_dssp SHHHHHHHHHHHHHTTCSEEEECCSSSCTTSCCTTCCCSSSCCHHHHHHHHHHH-HHHHHHHCTTSEEEEECTT------
T ss_pred CHHHHHHHHHHHHHcCCCEEEEeccccCCccccccCcccCCCchHHHHHHHHHH-HHHHHHhCCCCeEEEECCC------
Confidence 6788888888899999999885421 221 0 0 11222 3334311234555544421
Q ss_pred ccccCCChHHHHHHHHHHHHHcCCCcccEEEccCCCCCCCHHHHHHHHHHHHHcCCccEEEccC-CCHHHHHHHhhcCCc
Q 025500 100 GVIVKGAPDYVRSCCEASLKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSE-ASPGTIRRAHAVHPI 178 (252)
Q Consensus 100 ~~~~~~~~~~i~~~~~~sL~~Lg~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~G~ir~iGvs~-~~~~~l~~~~~~~~~ 178 (252)
.++.+...+-++. |+.++ +.++..|-.. +.|+.+.+++++-.|.-++--+ ++.+.++++++....
T Consensus 219 ----~~~~~~ai~~~~~-l~~~~-----i~~iE~P~~~----~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~~~ 284 (403)
T 2ox4_A 219 ----HTDLVSAIQFAKA-IEEFN-----IFFYEEINTP----LNPRLLKEAKKKIDIPLASGERIYSRWGFLPFLEDRSI 284 (403)
T ss_dssp ----CSCHHHHHHHHHH-HGGGC-----EEEEECCSCT----TSTHHHHHHHHTCCSCEEECTTCCHHHHHHHHHHTTCC
T ss_pred ----CCCHHHHHHHHHH-HHhhC-----CCEEeCCCCh----hhHHHHHHHHHhCCCCEEecCCcCCHHHHHHHHHcCCC
Confidence 2455555544443 66554 4556666432 2377778888876666554444 567889999988889
Q ss_pred eEEeeecCccccchh-hhHHHHHHHhCCeEEecccC
Q 025500 179 TAVQMEWSLWTRDIE-EEIIPLCRELGIGIVPYSPL 213 (252)
Q Consensus 179 ~~~q~~~~~~~~~~~-~~l~~~~~~~gi~v~a~spl 213 (252)
+++|+..+-.-.-.+ ..+.+.|+++|+.++..+..
T Consensus 285 d~v~ik~~~~GGite~~~i~~~A~~~g~~~~~h~~~ 320 (403)
T 2ox4_A 285 DVIQPDLGTCGGFTEFKKIADMAHIFEVTVQAHVAG 320 (403)
T ss_dssp SEECCCHHHHTHHHHHHHHHHHHHHTTCEECCCCCS
T ss_pred CEEecCccccCCHHHHHHHHHHHHHcCCEEeecCCC
Confidence 999998765432112 68999999999999987764
|
| >3ozy_A Putative mandelate racemase; beta-alpha barrel, enolase superfamily member, M-xylarate, U function; HET: DXL; 1.30A {Bordetella bronchiseptica} PDB: 3ozm_A* 3h12_A 3op2_A* | Back alignment and structure |
|---|
Probab=92.61 E-value=3.2 Score=36.29 Aligned_cols=152 Identities=9% Similarity=-0.019 Sum_probs=96.1
Q ss_pred CHHHHHHHHHHHHHCCCCEEeCcCCcCCCcHHHHHHHHHhcCCCCCEEEEeccCccCCCCcccccCCChHHHHHHHHHHH
Q 025500 39 SEEDGISMIKHAFSKGITFFDTADVYGQNANEVLLGKALKQLPREKIQVATKFGIAGIGVAGVIVKGAPDYVRSCCEASL 118 (252)
Q Consensus 39 ~~~~~~~~l~~A~~~Gin~~Dta~~Yg~g~se~~ig~~l~~~~R~~~~i~tK~~~~~~~~~~~~~~~~~~~i~~~~~~sL 118 (252)
+.++..+..+.+.+.|++.|..--.... ..+..+=+++++.-..++-|..+... .++.+...+ +-+.|
T Consensus 151 ~~e~~~~~a~~~~~~G~~~iKiKvG~~~-~~d~~~v~avR~a~g~d~~l~vDan~----------~~~~~~A~~-~~~~l 218 (389)
T 3ozy_A 151 TPDQAADELAGWVEQGFTAAKLKVGRAP-RKDAANLRAMRQRVGADVEILVDANQ----------SLGRHDALA-MLRIL 218 (389)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEEECCSCH-HHHHHHHHHHHHHHCTTSEEEEECTT----------CCCHHHHHH-HHHHH
T ss_pred CHHHHHHHHHHHHHCCCCEEeeccCCCH-HHHHHHHHHHHHHcCCCceEEEECCC----------CcCHHHHHH-HHHHH
Confidence 6788889999999999999986422111 12222334555421233444444321 245554433 34567
Q ss_pred HHcCCCcccEEEccCCCCCCCHHHHHHHHHHHH-HcCCccEEEc-cCCCHHHHHHHhhcCCceEEeeecCccccchh-hh
Q 025500 119 KRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLV-EEGKIKYIGL-SEASPGTIRRAHAVHPITAVQMEWSLWTRDIE-EE 195 (252)
Q Consensus 119 ~~Lg~d~iDl~~lh~~~~~~~~~~~~~~L~~l~-~~G~ir~iGv-s~~~~~~l~~~~~~~~~~~~q~~~~~~~~~~~-~~ 195 (252)
+.++++++ +.|-.. +.++.+.+++ ++-.|.-++- +-++.+.++++++....+++|+..+..-.-.+ ..
T Consensus 219 ~~~~i~~i-----EqP~~~----~d~~~~~~l~~~~~~iPIa~dE~i~~~~~~~~~i~~~~~d~v~ik~~~~GGit~~~~ 289 (389)
T 3ozy_A 219 DEAGCYWF-----EEPLSI----DDIEGHRILRAQGTPVRIATGENLYTRNAFNDYIRNDAIDVLQADASRAGGITEALA 289 (389)
T ss_dssp HHTTCSEE-----ESCSCT----TCHHHHHHHHTTCCSSEEEECTTCCHHHHHHHHHHTTCCSEECCCTTTSSCHHHHHH
T ss_pred HhcCCCEE-----ECCCCc----ccHHHHHHHHhcCCCCCEEeCCCCCCHHHHHHHHHcCCCCEEEeCccccCCHHHHHH
Confidence 77776655 455432 2367778888 6655543333 34677889999988889999998877543222 78
Q ss_pred HHHHHHHhCCeEEecc
Q 025500 196 IIPLCRELGIGIVPYS 211 (252)
Q Consensus 196 l~~~~~~~gi~v~a~s 211 (252)
+.+.|+++|+.++..+
T Consensus 290 ia~~A~~~gi~~~~h~ 305 (389)
T 3ozy_A 290 ISASAASAHLAWNPHT 305 (389)
T ss_dssp HHHHHHHTTCEECCCC
T ss_pred HHHHHHHcCCEEEecC
Confidence 9999999999998774
|
| >4dwd_A Mandelate racemase/muconate lactonizing enzyme, C domain protein; structural genomics, EFI, enzyme function initiative, metal protein; HET: MSE; 1.50A {Paracoccus denitrificans} PDB: 3n4e_A* | Back alignment and structure |
|---|
Probab=92.47 E-value=3.4 Score=36.25 Aligned_cols=151 Identities=11% Similarity=0.085 Sum_probs=94.0
Q ss_pred CHHHHHHHH-HHHHHCCCCEEeCcCCcC------CCcHHHHHHHHHhc-C-CCCCEEEEeccCccCCCCcccccCCChHH
Q 025500 39 SEEDGISMI-KHAFSKGITFFDTADVYG------QNANEVLLGKALKQ-L-PREKIQVATKFGIAGIGVAGVIVKGAPDY 109 (252)
Q Consensus 39 ~~~~~~~~l-~~A~~~Gin~~Dta~~Yg------~g~se~~ig~~l~~-~-~R~~~~i~tK~~~~~~~~~~~~~~~~~~~ 109 (252)
+.++..+.. +.+++.|++.|-.--... +-..+...=+++++ + +.-.+.| .... .++.+.
T Consensus 139 ~~e~~~~~a~~~~~~~G~~~~KlKvG~~~~~~~~~~~~d~~~v~avR~a~g~~~~l~v--DaN~----------~~~~~~ 206 (393)
T 4dwd_A 139 SVDEVVREVARRVEAEQPAAVKIRWDGDRTRCDVDIPGDIAKARAVRELLGPDAVIGF--DANN----------GYSVGG 206 (393)
T ss_dssp CHHHHHHHHHHHHHHHCCSEEEEECCCCTTCCSCCHHHHHHHHHHHHHHHCTTCCEEE--ECTT----------CCCHHH
T ss_pred CHHHHHHHHHHHHHHcCCCEEEEccCCCCcccccCHHHHHHHHHHHHHHhCCCCeEEE--ECCC----------CCCHHH
Confidence 567777778 888999999987543210 00122222345554 2 3334443 3221 245544
Q ss_pred HHHHHHHHHHHcCCCcccEEEccCCCCCCCHHHHHHHHHHHHHcCCcc-EEEccCCCHHHHHHHhhcCCceEEeeecCcc
Q 025500 110 VRSCCEASLKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIK-YIGLSEASPGTIRRAHAVHPITAVQMEWSLW 188 (252)
Q Consensus 110 i~~~~~~sL~~Lg~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~G~ir-~iGvs~~~~~~l~~~~~~~~~~~~q~~~~~~ 188 (252)
..+ +-+.|+.++++++ ..|-... .++.+.+++++-.+. ..|=+-++.+.++++++.. .+++|+..+..
T Consensus 207 A~~-~~~~L~~~~i~~i-----EqP~~~~----d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~-~d~v~~k~~~~ 275 (393)
T 4dwd_A 207 AIR-VGRALEDLGYSWF-----EEPVQHY----HVGAMGEVAQRLDITVSAGEQTYTLQALKDLILSG-VRMVQPDIVKM 275 (393)
T ss_dssp HHH-HHHHHHHTTCSEE-----ECCSCTT----CHHHHHHHHHHCSSEEEBCTTCCSHHHHHHHHHHT-CCEECCCTTTT
T ss_pred HHH-HHHHHHhhCCCEE-----ECCCCcc----cHHHHHHHHhhCCCCEEecCCcCCHHHHHHHHHcC-CCEEEeCcccc
Confidence 433 3356677776555 4553322 367778888765554 3334457888999998888 99999988775
Q ss_pred ccchh-hhHHHHHHHhCCeEEeccc
Q 025500 189 TRDIE-EEIIPLCRELGIGIVPYSP 212 (252)
Q Consensus 189 ~~~~~-~~l~~~~~~~gi~v~a~sp 212 (252)
-.-.+ ..+.+.|+++|+.++..+.
T Consensus 276 GGit~~~~ia~~A~~~gi~~~~h~~ 300 (393)
T 4dwd_A 276 GGITGMMQCAALAHAHGVEFVPHQT 300 (393)
T ss_dssp THHHHHHHHHHHHHHHTCEECCCCC
T ss_pred CCHHHHHHHHHHHHHcCCEEeecCC
Confidence 43222 7899999999999998776
|
| >3tj4_A Mandelate racemase; enolase, dehydratase, enzyme function initiative, EFI, lyase; 1.50A {Agrobacterium tumefaciens} PDB: 4h19_A* | Back alignment and structure |
|---|
Probab=92.40 E-value=4.2 Score=35.25 Aligned_cols=153 Identities=13% Similarity=0.054 Sum_probs=95.9
Q ss_pred CHHHHHHHHHHHHHC-CCCEEeCcCCcCCCcHHHHHHHHHhcCCCCCEEEEeccCccCCCCcccccCCChHHHHHHHHHH
Q 025500 39 SEEDGISMIKHAFSK-GITFFDTADVYGQNANEVLLGKALKQLPREKIQVATKFGIAGIGVAGVIVKGAPDYVRSCCEAS 117 (252)
Q Consensus 39 ~~~~~~~~l~~A~~~-Gin~~Dta~~Yg~g~se~~ig~~l~~~~R~~~~i~tK~~~~~~~~~~~~~~~~~~~i~~~~~~s 117 (252)
+.++..+..+.+++. |++.|-.--...+...+...=+++++.-..++.|...... .++.+... +.
T Consensus 151 ~~~~~~~~a~~~~~~~G~~~~K~Kvg~~~~~~d~~~v~avR~~~g~~~~l~vDan~----------~~~~~~a~----~~ 216 (372)
T 3tj4_A 151 TLEDLLAGSARAVEEDGFTRLKIKVGHDDPNIDIARLTAVRERVDSAVRIAIDGNG----------KWDLPTCQ----RF 216 (372)
T ss_dssp CHHHHHHHHHHHHHTTCCCEEEEECCCSSHHHHHHHHHHHHHHSCTTCEEEEECTT----------CCCHHHHH----HH
T ss_pred CHHHHHHHHHHHHHccCCCEEEEcCCCCCHHHHHHHHHHHHHHcCCCCcEEeeCCC----------CCCHHHHH----HH
Confidence 578888888899999 9998875422111112223335556522234444444321 13444332 33
Q ss_pred HHHcCCCcccEEEccCCCCCCCHHHHHHHHHHHHHcCCcc-EEEccCCCHHHHHHHhhcCCceEEeeecCccccchh-hh
Q 025500 118 LKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIK-YIGLSEASPGTIRRAHAVHPITAVQMEWSLWTRDIE-EE 195 (252)
Q Consensus 118 L~~Lg~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~G~ir-~iGvs~~~~~~l~~~~~~~~~~~~q~~~~~~~~~~~-~~ 195 (252)
++.|. ..++.++..|-... .++.+.+++++-.+. ..|=+-++.+.+.++++....+++|+..+-.-.-.+ ..
T Consensus 217 ~~~l~--~~~i~~iEqP~~~~----d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~~~d~v~~k~~~~GGit~~~~ 290 (372)
T 3tj4_A 217 CAAAK--DLDIYWFEEPLWYD----DVTSHARLARNTSIPIALGEQLYTVDAFRSFIDAGAVAYVQPDVTRLGGITEYIQ 290 (372)
T ss_dssp HHHTT--TSCEEEEESCSCTT----CHHHHHHHHHHCSSCEEECTTCCSHHHHHHHHHTTCCSEECCCTTTTTHHHHHHH
T ss_pred HHHHh--hcCCCEEECCCCch----hHHHHHHHHhhcCCCEEeCCCccCHHHHHHHHHcCCCCEEEeCccccCCHHHHHH
Confidence 34442 34677777775432 367777777764443 445556889999999988889999998876543222 78
Q ss_pred HHHHHHHhCCeEEecc
Q 025500 196 IIPLCRELGIGIVPYS 211 (252)
Q Consensus 196 l~~~~~~~gi~v~a~s 211 (252)
+.+.|+++|+.++..+
T Consensus 291 ia~~A~~~gi~~~~h~ 306 (372)
T 3tj4_A 291 VADLALAHRLPVVPHA 306 (372)
T ss_dssp HHHHHHHTTCCBCCCC
T ss_pred HHHHHHHcCCEEEecC
Confidence 9999999999998665
|
| >4e8g_A Enolase, mandelate racemase/muconate lactonizing enzyme, N domain protein; putative racemase, nysgrc, structural genomics, PSI-biology; 2.00A {Paracoccus denitrificans} | Back alignment and structure |
|---|
Probab=92.24 E-value=4 Score=35.76 Aligned_cols=155 Identities=8% Similarity=-0.007 Sum_probs=97.9
Q ss_pred CHHHHHHHHHHHHHCCCCEEeCcCCcCCCcHHHHHHHHHhc-CCCCCEEEEeccCccCCCCcccccCCChHHHHHHHHHH
Q 025500 39 SEEDGISMIKHAFSKGITFFDTADVYGQNANEVLLGKALKQ-LPREKIQVATKFGIAGIGVAGVIVKGAPDYVRSCCEAS 117 (252)
Q Consensus 39 ~~~~~~~~l~~A~~~Gin~~Dta~~Yg~g~se~~ig~~l~~-~~R~~~~i~tK~~~~~~~~~~~~~~~~~~~i~~~~~~s 117 (252)
+.++..+..+.+++.|++.|-.--...+-..+...=+++++ ....++-|....-. .++.+. ..+.
T Consensus 164 ~~e~~~~~a~~~~~~G~~~~KlKvg~~~~~~d~~~v~avR~a~gg~~~~L~vDaN~----------~w~~~~----A~~~ 229 (391)
T 4e8g_A 164 QPDEIARIAAEKVAEGFPRLQIKIGGRPVEIDIETVRKVWERIRGTGTRLAVDGNR----------SLPSRD----ALRL 229 (391)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEEECCSSCHHHHHHHHHHHHHHHTTTTCEEEEECTT----------CCCHHH----HHHH
T ss_pred CHHHHHHHHHHHHHcCCcEEEEcCCCCCHHHHHHHHHHHHHHhCCCCCeEEEeCCC----------CCCHHH----HHHH
Confidence 67888888899999999998753221110122222244444 22134444444322 134433 3344
Q ss_pred HHHcCCCcccEEEccCCCCCCCHHHHHHHHHHHHHcCCc-cEEEccCCCHHHHHHHhhcCCceEEeeecCccccchh-hh
Q 025500 118 LKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKI-KYIGLSEASPGTIRRAHAVHPITAVQMEWSLWTRDIE-EE 195 (252)
Q Consensus 118 L~~Lg~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~G~i-r~iGvs~~~~~~l~~~~~~~~~~~~q~~~~~~~~~~~-~~ 195 (252)
+++|. ..++ ++..|-. .++.+.+++++-.+ -+.|=+-++...+.++++...++++|+..+..-.-.+ ..
T Consensus 230 ~~~L~--~~~i-~iEeP~~------~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~~~~~a~d~v~ik~~~~GGit~~~~ 300 (391)
T 4e8g_A 230 SRECP--EIPF-VLEQPCN------TLEEIAAIRGRVQHGIYLDESGEDLSTVIRAAGQGLCDGFGMKLTRIGGLQQMAA 300 (391)
T ss_dssp HHHCT--TSCE-EEESCSS------SHHHHHHHGGGCCSCEEESTTCCSHHHHHHHHHTTCCSEEEEEHHHHTSHHHHHH
T ss_pred HHHHh--hcCe-EEecCCc------cHHHHHHHHhhCCCCEEeCCCCCCHHHHHHHHHcCCCCEEEeCccccCCHHHHHH
Confidence 55554 3477 7887732 36777888776444 3455566889999999988889999998766432212 67
Q ss_pred HHHHHHHhCCeEEecccCccc
Q 025500 196 IIPLCRELGIGIVPYSPLGRG 216 (252)
Q Consensus 196 l~~~~~~~gi~v~a~spl~~G 216 (252)
+.+.|+++|+.++..+.+..+
T Consensus 301 ia~~A~~~gi~~~~~~~~es~ 321 (391)
T 4e8g_A 301 FRDICEARALPHSCDDAWGGD 321 (391)
T ss_dssp HHHHHHHTTCCEEEECSSCSH
T ss_pred HHHHHHHcCCeEEeCCcCCCH
Confidence 999999999999988776554
|
| >3u9i_A Mandelate racemase/muconate lactonizing enzyme, C domain protein; structural genomics, PSI-biology; 2.90A {Roseiflexus SP} | Back alignment and structure |
|---|
Probab=92.22 E-value=1.5 Score=38.44 Aligned_cols=157 Identities=12% Similarity=0.047 Sum_probs=96.9
Q ss_pred CHHHHHHHHHHHHHCCCCEEeCcCCcCC--------CcHHHHHHHHHhc-CCCCCEEEEeccCccCCCCcccccCCChHH
Q 025500 39 SEEDGISMIKHAFSKGITFFDTADVYGQ--------NANEVLLGKALKQ-LPREKIQVATKFGIAGIGVAGVIVKGAPDY 109 (252)
Q Consensus 39 ~~~~~~~~l~~A~~~Gin~~Dta~~Yg~--------g~se~~ig~~l~~-~~R~~~~i~tK~~~~~~~~~~~~~~~~~~~ 109 (252)
+.++..+..+.+++.|++.|=.--...+ -..+...=+++++ .+.-++.| -.- ..++.+.
T Consensus 165 ~~e~~~~~a~~~~~~Gf~~iKlKvg~~~~~~~~~~~~~~di~~v~avR~a~~d~~L~v--DaN----------~~w~~~~ 232 (393)
T 3u9i_A 165 SVTAAARAAQAIVARGVTTIKIKIGAGDPDATTIRTMEHDLARIVAIRDVAPTARLIL--DGN----------CGYTAPD 232 (393)
T ss_dssp -CHHHHHHHHHHHTTTCCEEEEECC-------CHHHHHHHHHHHHHHHHHSTTSEEEE--ECC----------SCCCHHH
T ss_pred CHHHHHHHHHHHHHcCCCeEEEEeCCCcccccccccHHHHHHHHHHHHHHCCCCeEEE--Ecc----------CCCCHHH
Confidence 4577788888889999998764322110 0012222234454 44223333 211 1234433
Q ss_pred HHHHHHHHHHHcCCCcccEEEccCCCCCCCHHHHHHHHHHHHHcCC-ccEEEccCCCHHHHHHHhhcCCceEEeeecCcc
Q 025500 110 VRSCCEASLKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGK-IKYIGLSEASPGTIRRAHAVHPITAVQMEWSLW 188 (252)
Q Consensus 110 i~~~~~~sL~~Lg~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~G~-ir~iGvs~~~~~~l~~~~~~~~~~~~q~~~~~~ 188 (252)
. .+.+++|.-+.+++.++..|-...+ ++.+.++.++-. --+.|=+-++...+.++++...++++|+..+.
T Consensus 233 A----~~~~~~L~~~~~~i~~iEeP~~~~d----~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~a~d~i~~k~~~- 303 (393)
T 3u9i_A 233 A----LRLLDMLGVHGIVPALFEQPVAKDD----EEGLRRLTATRRVPVAADESVASATDAARLARNAAVDVLNIKLMK- 303 (393)
T ss_dssp H----HHHHHTTTTTTCCCSEEECCSCTTC----TTHHHHHHHTCSSCEEESTTCCSHHHHHHHHHTTCCSEEEECHHH-
T ss_pred H----HHHHHHHhhCCCCeEEEECCCCCCc----HHHHHHHHhhCCCcEEeCCcCCCHHHHHHHHHcCCCCEEEecccc-
Confidence 2 3445566333468888888865433 556677776543 34566677899999999988889999998877
Q ss_pred ccchh-hhHHHHHHHhCCeEEecccCccc
Q 025500 189 TRDIE-EEIIPLCRELGIGIVPYSPLGRG 216 (252)
Q Consensus 189 ~~~~~-~~l~~~~~~~gi~v~a~spl~~G 216 (252)
-.-.+ ..+.+.|+++|+.++..+.+.++
T Consensus 304 GGit~~~~ia~~A~~~gi~~~~~~~~es~ 332 (393)
T 3u9i_A 304 CGIVEALDIAAIARTAGLHLMIGGMVESL 332 (393)
T ss_dssp HCHHHHHHHHHHHHHHTCEEEECCSSCCH
T ss_pred cCHHHHHHHHHHHHHcCCeEEecCCcccH
Confidence 32112 67899999999999988876544
|
| >2qq6_A Mandelate racemase/muconate lactonizing enzyme- like protein; enolase, Mg ION, PSI-2, NYSGXRC, structural genomics; 2.90A {Rubrobacter xylanophilus dsm 9941} | Back alignment and structure |
|---|
Probab=92.15 E-value=2.4 Score=37.30 Aligned_cols=154 Identities=12% Similarity=0.076 Sum_probs=95.6
Q ss_pred CHHHHHHHHHHHHHCCCCEEeCcC--CcCC-------C-----c---HHHHHHHHHhcCCCCCEEEEeccCccCCCCccc
Q 025500 39 SEEDGISMIKHAFSKGITFFDTAD--VYGQ-------N-----A---NEVLLGKALKQLPREKIQVATKFGIAGIGVAGV 101 (252)
Q Consensus 39 ~~~~~~~~l~~A~~~Gin~~Dta~--~Yg~-------g-----~---se~~ig~~l~~~~R~~~~i~tK~~~~~~~~~~~ 101 (252)
+.++..+....+.+.|++.|-.-- .||. | . ..+.+ +++++.-..++.|......
T Consensus 149 ~~~~~~~~a~~~~~~Gf~~vKik~~~~~G~~~~~~~G~~~~~~~~~~~~e~v-~avRea~G~d~~l~vDan~-------- 219 (410)
T 2qq6_A 149 SNEEYIAVAREAVERGFDAIKLDVDDITGPLHRDFWNGAISPREHEAMVARV-AAVREAVGPEVEVAIDMHG-------- 219 (410)
T ss_dssp HHHHHHHHHHHHHHTTCSEEEEECCCSSSTTCSCSSSCCCCHHHHHHHHHHH-HHHHHHHCSSSEEEEECTT--------
T ss_pred CHHHHHHHHHHHHHcCCCEEEeeccccCCcccCCcCccccchhhHHHHHHHH-HHHHHhcCCCCEEEEECCC--------
Confidence 467777888889999999877432 2332 1 1 12222 3444411234444444321
Q ss_pred ccCCChHHHHHHHHHHHHHcCCCcccEEEccCCCCCCCHHHHHHHHHHHHHcCCccEEEc-cCCCHHHHHHHhhcCCceE
Q 025500 102 IVKGAPDYVRSCCEASLKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGL-SEASPGTIRRAHAVHPITA 180 (252)
Q Consensus 102 ~~~~~~~~i~~~~~~sL~~Lg~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~G~ir~iGv-s~~~~~~l~~~~~~~~~~~ 180 (252)
.++.+...+-++. |+.+++++ +..|-.. +.++.+.+++++-.|.-++- +-++.+.++++++....++
T Consensus 220 --~~~~~~a~~~~~~-l~~~~i~~-----iEeP~~~----~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~~~d~ 287 (410)
T 2qq6_A 220 --RFDIPSSIRFARA-MEPFGLLW-----LEEPTPP----ENLDALAEVRRSTSTPICAGENVYTRFDFRELFAKRAVDY 287 (410)
T ss_dssp --CCCHHHHHHHHHH-HGGGCCSE-----EECCSCT----TCHHHHHHHHTTCSSCEEECTTCCSHHHHHHHHHTTCCSE
T ss_pred --CCCHHHHHHHHHH-HhhcCCCe-----EECCCCh----hhHHHHHHHHhhCCCCEEeCCCcCCHHHHHHHHHcCCCCE
Confidence 2456665554433 77776654 4555432 23777788887655554443 3368899999998888999
Q ss_pred EeeecCccccchh-hhHHHHHHHhCCeEEecccC
Q 025500 181 VQMEWSLWTRDIE-EEIIPLCRELGIGIVPYSPL 213 (252)
Q Consensus 181 ~q~~~~~~~~~~~-~~l~~~~~~~gi~v~a~spl 213 (252)
+|+..+-.-.-.+ ..+.+.|+++|+.++..+..
T Consensus 288 v~ik~~~~GGite~~~ia~~A~~~g~~~~~h~~~ 321 (410)
T 2qq6_A 288 VMPDVAKCGGLAEAKRIANLAELDYIPFAPHNVS 321 (410)
T ss_dssp ECCBHHHHTHHHHHHHHHHHHHTTTCCBCCBCCS
T ss_pred EecCccccCCHHHHHHHHHHHHHcCCeEeecCCC
Confidence 9998765432112 67899999999999887763
|
| >1tzz_A Hypothetical protein L1841; structural genomics, mandelate racemase like fold, nysgxrc target T1523, PSI, protein structure initiative; 1.86A {Bradyrhizobium japonicum} SCOP: c.1.11.2 d.54.1.1 PDB: 2dw7_A* 2dw6_A* | Back alignment and structure |
|---|
Probab=91.90 E-value=3.2 Score=36.21 Aligned_cols=151 Identities=10% Similarity=-0.028 Sum_probs=93.1
Q ss_pred CHHHHHHHHHHHHHCCCCEEeCcCCcCC-CcHHHHHHHHHhcCCCCCEEEEeccCccCCCCcccccCCChHHHHHHHHHH
Q 025500 39 SEEDGISMIKHAFSKGITFFDTADVYGQ-NANEVLLGKALKQLPREKIQVATKFGIAGIGVAGVIVKGAPDYVRSCCEAS 117 (252)
Q Consensus 39 ~~~~~~~~l~~A~~~Gin~~Dta~~Yg~-g~se~~ig~~l~~~~R~~~~i~tK~~~~~~~~~~~~~~~~~~~i~~~~~~s 117 (252)
+.++..+....+.+.|++.|..--.-++ ....+.+ +++++.-..++.|...... .++.+...+-++.
T Consensus 165 ~~~~~~~~a~~~~~~Gf~~iKik~g~~~~~~~~e~v-~avr~a~g~~~~l~vDan~----------~~~~~~a~~~~~~- 232 (392)
T 1tzz_A 165 GLSMLRGEMRGYLDRGYNVVKMKIGGAPIEEDRMRI-EAVLEEIGKDAQLAVDANG----------RFNLETGIAYAKM- 232 (392)
T ss_dssp CHHHHHHHHHHHHTTTCSEEEEECSSSCHHHHHHHH-HHHHHHHTTTCEEEEECTT----------CCCHHHHHHHHHH-
T ss_pred CHHHHHHHHHHHHHcCCCEEEEcCCCCCHHHHHHHH-HHHHHhcCCCCeEEEECCC----------CCCHHHHHHHHHH-
Confidence 5677888888899999998874321111 0122333 3444411124444433311 2456555544443
Q ss_pred HHHcCCCcccEEEccCCCCCCCHHHHHHHHHHHHHcCCccEEEc-cCCCHHHHHHHhhcC----CceEEeeecCccccch
Q 025500 118 LKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGL-SEASPGTIRRAHAVH----PITAVQMEWSLWTRDI 192 (252)
Q Consensus 118 L~~Lg~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~G~ir~iGv-s~~~~~~l~~~~~~~----~~~~~q~~~~~~~~~~ 192 (252)
|+.+++++ +..|-.. +.++.+.+++++-.|.-++- +-++.+.++++++.. ..+++|+..+..-.-.
T Consensus 233 l~~~~i~~-----iEqP~~~----~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~~~~~~~d~v~ik~~~~GGit 303 (392)
T 1tzz_A 233 LRDYPLFW-----YEEVGDP----LDYALQAALAEFYPGPMATGENLFSHQDARNLLRYGGMRPDRDWLQFDCALSYGLC 303 (392)
T ss_dssp HTTSCCSE-----EECCSCT----TCHHHHHHHTTTCCSCEEECTTCCSHHHHHHHHHHSCCCTTTCEECCCTTTTTCHH
T ss_pred HHHcCCCe-----ecCCCCh----hhHHHHHHHHhhCCCCEEECCCCCCHHHHHHHHHcCCCccCCcEEEECccccCCHH
Confidence 66666654 4555332 34777788887655554433 336788999998888 8999999887654322
Q ss_pred h-hhHHHHHHHhCCe---EEec
Q 025500 193 E-EEIIPLCRELGIG---IVPY 210 (252)
Q Consensus 193 ~-~~l~~~~~~~gi~---v~a~ 210 (252)
+ ..+.+.|+++|+. ++..
T Consensus 304 ~~~~i~~~A~~~gi~~~~~~~~ 325 (392)
T 1tzz_A 304 EYQRTLEVLKTHGWSPSRCIPH 325 (392)
T ss_dssp HHHHHHHHHHHTTCCGGGBCCS
T ss_pred HHHHHHHHHHHCCCCCceEeec
Confidence 2 6899999999999 7777
|
| >2hzg_A Mandelate racemase/muconate lactonizing enzyme/EN superfamily; structural genomics, predicted mandelate racemase, PSI; 2.02A {Rhodobacter sphaeroides} | Back alignment and structure |
|---|
Probab=91.84 E-value=4.2 Score=35.56 Aligned_cols=156 Identities=10% Similarity=0.022 Sum_probs=96.7
Q ss_pred CHHHHHHHHHHHHHCCCCEEeCcC-CcCCC--cHHHHHHHHHhcCCCCCEEEEeccCccCCCCcccccCC--ChHHHHHH
Q 025500 39 SEEDGISMIKHAFSKGITFFDTAD-VYGQN--ANEVLLGKALKQLPREKIQVATKFGIAGIGVAGVIVKG--APDYVRSC 113 (252)
Q Consensus 39 ~~~~~~~~l~~A~~~Gin~~Dta~-~Yg~g--~se~~ig~~l~~~~R~~~~i~tK~~~~~~~~~~~~~~~--~~~~i~~~ 113 (252)
+.++..+....+.+.|++.|..-. ..|.. +....+=+++++.--.++.|..+... .+ +.+...+-
T Consensus 145 ~~~~~~~~a~~~~~~Gf~~iKik~spvG~~~~~~~~e~v~avr~a~G~d~~l~vDan~----------~~~~~~~~a~~~ 214 (401)
T 2hzg_A 145 TPQETLERARAARRDGFAAVKFGWGPIGRGTVAADADQIMAAREGLGPDGDLMVDVGQ----------IFGEDVEAAAAR 214 (401)
T ss_dssp SHHHHHHHHHHHHHTTCSEEEEESTTTTSSCHHHHHHHHHHHHHHHCSSSEEEEECTT----------TTTTCHHHHHTT
T ss_pred CHHHHHHHHHHHHHhCCCeEEEcCCCCCCCHHHHHHHHHHHHHHHhCCCCeEEEECCC----------CCCCCHHHHHHH
Confidence 578888888889999999988530 02311 11222223444311124445444421 24 56655544
Q ss_pred HHHHHHHcCCCcccEEEccCCCCCCCHHHHHHHHHHHHH-cCCccEEEccC-CCHHHHHHHhhcCCceEEeeecCccccc
Q 025500 114 CEASLKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVE-EGKIKYIGLSE-ASPGTIRRAHAVHPITAVQMEWSLWTRD 191 (252)
Q Consensus 114 ~~~sL~~Lg~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~-~G~ir~iGvs~-~~~~~l~~~~~~~~~~~~q~~~~~~~~~ 191 (252)
++. |+.++++++ ..|-.. +.|+.+.++++ +-.|.-++--+ ++.+.++++++....+++|+..+..-.-
T Consensus 215 ~~~-l~~~~i~~i-----EqP~~~----~d~~~~~~l~~~~~~iPI~~dE~~~~~~~~~~~i~~~~~d~v~ik~~~~GGi 284 (401)
T 2hzg_A 215 LPT-LDAAGVLWL-----EEPFDA----GALAAHAALAGRGARVRIAGGEAAHNFHMAQHLMDYGRIGFIQIDCGRIGGL 284 (401)
T ss_dssp HHH-HHHTTCSEE-----ECCSCT----TCHHHHHHHHTTCCSSEEEECTTCSSHHHHHHHHHHSCCSEEEECHHHHTSH
T ss_pred HHH-HHhcCCCEE-----ECCCCc----cCHHHHHHHHhhCCCCCEEecCCcCCHHHHHHHHHCCCCCEEEeCcchhCCH
Confidence 444 777877654 455322 34778888887 65555444433 6788999999888899999987664322
Q ss_pred hh-hhHHHHHHHhCCeEEecccCcc
Q 025500 192 IE-EEIIPLCRELGIGIVPYSPLGR 215 (252)
Q Consensus 192 ~~-~~l~~~~~~~gi~v~a~spl~~ 215 (252)
.+ ..+.+.|+++|+.++.. .+..
T Consensus 285 t~~~~i~~~A~~~g~~~~~h-~~es 308 (401)
T 2hzg_A 285 GPAKRVADAAQARGITYVNH-TFTS 308 (401)
T ss_dssp HHHHHHHHHHHHHTCEEEEC-CCSC
T ss_pred HHHHHHHHHHHHcCCEEecC-CCCc
Confidence 12 67999999999999877 4443
|
| >3toy_A Mandelate racemase/muconate lactonizing enzyme FA protein; enolase, magnesium binding site, lyase; HET: P4C; 1.80A {Bradyrhizobium SP} PDB: 3tte_A* | Back alignment and structure |
|---|
Probab=91.78 E-value=5.6 Score=34.64 Aligned_cols=156 Identities=13% Similarity=0.060 Sum_probs=95.9
Q ss_pred CHHHHHHHHHHHHHC-CCCEEeCcCCcCCCcHHHHHHHHHhcCCCCCEEEEeccCccCCCCcccccCCChHHHHHHHHHH
Q 025500 39 SEEDGISMIKHAFSK-GITFFDTADVYGQNANEVLLGKALKQLPREKIQVATKFGIAGIGVAGVIVKGAPDYVRSCCEAS 117 (252)
Q Consensus 39 ~~~~~~~~l~~A~~~-Gin~~Dta~~Yg~g~se~~ig~~l~~~~R~~~~i~tK~~~~~~~~~~~~~~~~~~~i~~~~~~s 117 (252)
+.++..+..+.+++. |++.|-.--...+-..+...=+++++.-..++.|...... .++.+...+ +-+.
T Consensus 167 ~~e~~~~~a~~~~~~~G~~~~KlKvG~~~~~~d~~~v~avR~a~G~~~~l~vDaN~----------~~~~~~A~~-~~~~ 235 (383)
T 3toy_A 167 DARDDERTLRTACDEHGFRAIKSKGGHGDLATDEAMIKGLRALLGPDIALMLDFNQ----------SLDPAEATR-RIAR 235 (383)
T ss_dssp CHHHHHHHHHHHHHTSCCCEEEEECCSSCHHHHHHHHHHHHHHHCTTSEEEEECTT----------CSCHHHHHH-HHHH
T ss_pred CHHHHHHHHHHHHHccCCcEEEEecCCCCHHHHHHHHHHHHHHhCCCCeEEEeCCC----------CCCHHHHHH-HHHH
Confidence 678888889999999 9998875422111112223334555521233334333321 234544332 3345
Q ss_pred HHHcCCCcccEEEccCCCCCCCHHHHHHHHHHHHHcCCcc-EEEccCCCHHHHHHHhhcCCceEEeeecCccccchh-hh
Q 025500 118 LKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIK-YIGLSEASPGTIRRAHAVHPITAVQMEWSLWTRDIE-EE 195 (252)
Q Consensus 118 L~~Lg~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~G~ir-~iGvs~~~~~~l~~~~~~~~~~~~q~~~~~~~~~~~-~~ 195 (252)
|+.++++ ++..|-... .++.+.+++++-.+. ..|=+-++...+.++++....+++|+..+..-.-.+ ..
T Consensus 236 l~~~~i~-----~iEeP~~~~----d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~a~d~v~ik~~~~GGit~~~~ 306 (383)
T 3toy_A 236 LADYDLT-----WIEEPVPQE----NLSGHAAVRERSEIPIQAGENWWFPRGFAEAIAAGASDFIMPDLMKVGGITGWLN 306 (383)
T ss_dssp HGGGCCS-----EEECCSCTT----CHHHHHHHHHHCSSCEEECTTCCHHHHHHHHHHHTCCSEECCCTTTTTHHHHHHH
T ss_pred HHhhCCC-----EEECCCCcc----hHHHHHHHHhhcCCCEEeCCCcCCHHHHHHHHHcCCCCEEEeCccccCCHHHHHH
Confidence 5666554 445664432 356677787764443 445556778899999888889999998876543212 68
Q ss_pred HHHHHHHhCCeEEecccCc
Q 025500 196 IIPLCRELGIGIVPYSPLG 214 (252)
Q Consensus 196 l~~~~~~~gi~v~a~spl~ 214 (252)
+.+.|+++|+.++..+.+.
T Consensus 307 ia~~A~~~gi~~~~h~~~~ 325 (383)
T 3toy_A 307 VAGQADAASIPMSSHILPE 325 (383)
T ss_dssp HHHHHHHHTCCBCCCSCHH
T ss_pred HHHHHHHcCCEEeecCHHH
Confidence 9999999999998776554
|
| >2gdq_A YITF; mandelate racemase/muconate lactonizing enzyme, TIM-barrel, octamer, structural genomics, PSI; 1.80A {Bacillus subtilis subsp} SCOP: c.1.11.2 d.54.1.1 PDB: 2gge_A | Back alignment and structure |
|---|
Probab=91.71 E-value=2.1 Score=37.26 Aligned_cols=155 Identities=9% Similarity=0.010 Sum_probs=92.9
Q ss_pred HHHHHHHHHHHHCCCCEEeCcCCcCCCc-HHHHHHHHHhcCCCCCEEEEeccCccCCCCcccccCCChHHHHHHHHHHHH
Q 025500 41 EDGISMIKHAFSKGITFFDTADVYGQNA-NEVLLGKALKQLPREKIQVATKFGIAGIGVAGVIVKGAPDYVRSCCEASLK 119 (252)
Q Consensus 41 ~~~~~~l~~A~~~Gin~~Dta~~Yg~g~-se~~ig~~l~~~~R~~~~i~tK~~~~~~~~~~~~~~~~~~~i~~~~~~sL~ 119 (252)
++..+....+.+.|++.|..--.-++-+ ..+.+ +++++.-..++.|...... .++.+...+-++ .|+
T Consensus 141 e~~~~~a~~~~~~Gf~~vKik~g~~~~~~d~e~v-~avR~a~G~d~~l~vDan~----------~~~~~~a~~~~~-~l~ 208 (382)
T 2gdq_A 141 SRSVSNVEAQLKKGFEQIKVKIGGTSFKEDVRHI-NALQHTAGSSITMILDANQ----------SYDAAAAFKWER-YFS 208 (382)
T ss_dssp HHHHHHHHHHHTTTCCEEEEECSSSCHHHHHHHH-HHHHHHHCTTSEEEEECTT----------CCCHHHHHTTHH-HHT
T ss_pred HHHHHHHHHHHHcCCCEEEEcCCCCCHHHHHHHH-HHHHHhhCCCCEEEEECCC----------CCCHHHHHHHHH-HHh
Confidence 7777788888999999887532111101 22333 3444411124444433321 245554443333 245
Q ss_pred HcCCCcccEEEccCCCCCCCHHHHHHHHHHHHHcCCccEEEc-cCCCHHHHHHHhhcCCceEEeeecCccccchh-hhHH
Q 025500 120 RLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGL-SEASPGTIRRAHAVHPITAVQMEWSLWTRDIE-EEII 197 (252)
Q Consensus 120 ~Lg~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~G~ir~iGv-s~~~~~~l~~~~~~~~~~~~q~~~~~~~~~~~-~~l~ 197 (252)
.+ -++.++..|-.. +.++.+.+++++-.|.-++- +-++.+.++++++....+++|+..+..-.-.+ ..+.
T Consensus 209 ~~----~~i~~iEqP~~~----~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~~~d~v~ik~~~~GGit~~~~i~ 280 (382)
T 2gdq_A 209 EW----TNIGWLEEPLPF----DQPQDYAMLRSRLSVPVAGGENMKGPAQYVPLLSQRCLDIIQPDVMHVNGIDEFRDCL 280 (382)
T ss_dssp TC----SCEEEEECCSCS----SCHHHHHHHHTTCSSCEEECTTCCSHHHHHHHHHTTCCSEECCCTTTTTHHHHHHHHH
T ss_pred hc----cCCeEEECCCCc----ccHHHHHHHHhhCCCCEEecCCcCCHHHHHHHHHcCCCCEEecCccccCCHHHHHHHH
Confidence 44 045566666433 23677788887655554433 34678899999988889999998876543222 6899
Q ss_pred HHHHHhCCeEEecccCccc
Q 025500 198 PLCRELGIGIVPYSPLGRG 216 (252)
Q Consensus 198 ~~~~~~gi~v~a~spl~~G 216 (252)
+.|+++|+.++.. .+..+
T Consensus 281 ~~A~~~g~~~~~~-~~es~ 298 (382)
T 2gdq_A 281 QLARYFGVRASAH-AYDGS 298 (382)
T ss_dssp HHHHHHTCEECCC-CSSCS
T ss_pred HHHHHcCCEEeec-CCCcH
Confidence 9999999999887 44433
|
| >3my9_A Muconate cycloisomerase; structural genomics, PSI-2, protein structure INI NEW YORK SGX research center for structural genomics, nysgx; 2.20A {Azorhizobium caulinodans} | Back alignment and structure |
|---|
Probab=91.67 E-value=1.3 Score=38.63 Aligned_cols=158 Identities=10% Similarity=0.061 Sum_probs=93.1
Q ss_pred CHHHHHHHHHHHHHCCCCEEeCcCCcCCCcHHHHHHHHHhcCCCCCEEEEeccCccCCCCcccccCCChHHHHHHHHHHH
Q 025500 39 SEEDGISMIKHAFSKGITFFDTADVYGQNANEVLLGKALKQLPREKIQVATKFGIAGIGVAGVIVKGAPDYVRSCCEASL 118 (252)
Q Consensus 39 ~~~~~~~~l~~A~~~Gin~~Dta~~Yg~g~se~~ig~~l~~~~R~~~~i~tK~~~~~~~~~~~~~~~~~~~i~~~~~~sL 118 (252)
+.++..+..+.+++.|++.|-.--...+-..+...=+++++.-..++-|....... ++.+... .+-+.|
T Consensus 146 ~~~~~~~~a~~~~~~G~~~~K~Kvg~~~~~~d~~~v~avR~~~g~~~~l~vDan~~----------~~~~~A~-~~~~~l 214 (377)
T 3my9_A 146 DFDADLERMRAMVPAGHTVFKMKTGVKPHAEELRILETMRGEFGERIDLRLDFNQA----------LTPFGAM-KILRDV 214 (377)
T ss_dssp SHHHHHHHHHHHTTTTCCEEEEECSSSCHHHHHHHHHHHHHHHGGGSEEEEECTTC----------CCTTTHH-HHHHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEEccCCCcHHHHHHHHHHHHHHhCCCCeEEEeCCCC----------cCHHHHH-HHHHHH
Confidence 56666777788888999988754321110122223345554111333333333211 2232222 244566
Q ss_pred HHcCCCcccEEEccCCCCCCCHHHHHHHHHHHHHcCCcc-EEEccCCCHHHHHHHhhcCCceEEeeecCccccch-hhhH
Q 025500 119 KRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIK-YIGLSEASPGTIRRAHAVHPITAVQMEWSLWTRDI-EEEI 196 (252)
Q Consensus 119 ~~Lg~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~G~ir-~iGvs~~~~~~l~~~~~~~~~~~~q~~~~~~~~~~-~~~l 196 (252)
+.++++++ ..|-... .++.+.+++++-.+. ..|=+-++.+++.++++....+++|+..+..-.-. -..+
T Consensus 215 ~~~~i~~i-----EqP~~~~----d~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~i~~~~~d~v~~k~~~~GGit~~~~i 285 (377)
T 3my9_A 215 DAFRPTFI-----EQPVPRR----HLDAMAGFAAALDTPILADESCFDAVDLMEVVRRQAADAISVKIMKCGGLMKAQSL 285 (377)
T ss_dssp HTTCCSCE-----ECCSCTT----CHHHHHHHHHHCSSCEEESTTCSSHHHHHHHHHHTCCSEEECCHHHHTSHHHHHHH
T ss_pred hhcCCCEE-----ECCCCcc----CHHHHHHHHHhCCCCEEECCccCCHHHHHHHHHcCCCCEEEecccccCCHHHHHHH
Confidence 66666554 4453322 367777787764443 44445688899999998888999999876543211 2678
Q ss_pred HHHHHHhCCeEEecccCccc
Q 025500 197 IPLCRELGIGIVPYSPLGRG 216 (252)
Q Consensus 197 ~~~~~~~gi~v~a~spl~~G 216 (252)
.+.|+++|+.++..+.+.+|
T Consensus 286 ~~~a~~~gi~~~~~~~~es~ 305 (377)
T 3my9_A 286 MAIADTAGLPGYGGTLWEGG 305 (377)
T ss_dssp HHHHHHHTCCEECCEECCSH
T ss_pred HHHHHHcCCeEecCCCCCcH
Confidence 99999999999876555443
|
| >2hxt_A L-fuconate dehydratase; enolase superfamily, D-erythromohydr unknown function; HET: EHM; 1.70A {Xanthomonas campestris PV} PDB: 1yey_A 2hxu_A* 2hne_A | Back alignment and structure |
|---|
Probab=91.62 E-value=2.9 Score=37.21 Aligned_cols=151 Identities=11% Similarity=0.096 Sum_probs=91.6
Q ss_pred CHHHHHHHHHHHHHCCCCEEeCcCCcCCCcHHHHHHHHHhcCCCCCEEEEeccCccCCCCcccccCCChHHHHHHHHHHH
Q 025500 39 SEEDGISMIKHAFSKGITFFDTADVYGQNANEVLLGKALKQLPREKIQVATKFGIAGIGVAGVIVKGAPDYVRSCCEASL 118 (252)
Q Consensus 39 ~~~~~~~~l~~A~~~Gin~~Dta~~Yg~g~se~~ig~~l~~~~R~~~~i~tK~~~~~~~~~~~~~~~~~~~i~~~~~~sL 118 (252)
+.++..+....+.+.|++.|..--.-......+.+ +++++.-..++.|..... ..++.+...+-++. |
T Consensus 198 ~~e~~~~~a~~~~~~Gf~~vKik~g~~~~~d~e~v-~avR~a~G~d~~l~vDan----------~~~~~~~a~~~~~~-l 265 (441)
T 2hxt_A 198 SDEKLVRLAKEAVADGFRTIKLKVGANVQDDIRRC-RLARAAIGPDIAMAVDAN----------QRWDVGPAIDWMRQ-L 265 (441)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEEECCSCHHHHHHHH-HHHHHHHCSSSEEEEECT----------TCCCHHHHHHHHHT-T
T ss_pred CHHHHHHHHHHHHHcCCCEEEEccCCCHHHHHHHH-HHHHHhcCCCCeEEEECC----------CCCCHHHHHHHHHH-H
Confidence 67888888889999999988743210000122333 455541122333333321 12456555544444 6
Q ss_pred HHcCCCcccEEEccCCCCCCCHHHHHHHHHHHHHc-CCc-cEEEccCCCHHHHHHHhhcCCceEEeeecCccccchh-hh
Q 025500 119 KRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEE-GKI-KYIGLSEASPGTIRRAHAVHPITAVQMEWSLWTRDIE-EE 195 (252)
Q Consensus 119 ~~Lg~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~-G~i-r~iGvs~~~~~~l~~~~~~~~~~~~q~~~~~~~~~~~-~~ 195 (252)
+.+++++ +..|-.. +.++.+.+++++ +.| -..|=+-++.+.++++++....+++|+..+..-.-.+ ..
T Consensus 266 ~~~~i~~-----iEqP~~~----~d~~~~~~l~~~~~~iPIa~dE~~~~~~~~~~~i~~~~~d~v~ik~~~~GGite~~~ 336 (441)
T 2hxt_A 266 AEFDIAW-----IEEPTSP----DDVLGHAAIRQGITPVPVSTGEHTQNRVVFKQLLQAGAVDLIQIDAARVGGVNENLA 336 (441)
T ss_dssp GGGCCSC-----EECCSCT----TCHHHHHHHHHHHTTSCEEECTTCCSHHHHHHHHHHTCCSEECCCTTTSSHHHHHHH
T ss_pred HhcCCCe-----eeCCCCH----HHHHHHHHHHhhCCCCCEEEeCCcCCHHHHHHHHHcCCCCEEEeCcceeCCHHHHHH
Confidence 7676654 4455332 236667777765 223 3444455788999999988889999998876543222 67
Q ss_pred HHHHHHHhCCeEEec
Q 025500 196 IIPLCRELGIGIVPY 210 (252)
Q Consensus 196 l~~~~~~~gi~v~a~ 210 (252)
+...|+++|+.+...
T Consensus 337 ia~~A~~~g~~~~~h 351 (441)
T 2hxt_A 337 ILLLAAKFGVRVFPH 351 (441)
T ss_dssp HHHHHHHTTCEECCC
T ss_pred HHHHHHHcCCeEEEe
Confidence 999999999998643
|
| >3rr1_A GALD, putative D-galactonate dehydratase; enolase, magnesium binding site, lyase; 1.95A {Ralstonia pickettii} PDB: 3rra_A | Back alignment and structure |
|---|
Probab=91.32 E-value=6.4 Score=34.59 Aligned_cols=151 Identities=13% Similarity=0.120 Sum_probs=96.4
Q ss_pred CHHHHHHHHHHHHHCCCCEEeCcCCcCCC-----------cHHHHHHHHHhcCCCCCEEEEeccCccCCCCcccccCCCh
Q 025500 39 SEEDGISMIKHAFSKGITFFDTADVYGQN-----------ANEVLLGKALKQLPREKIQVATKFGIAGIGVAGVIVKGAP 107 (252)
Q Consensus 39 ~~~~~~~~l~~A~~~Gin~~Dta~~Yg~g-----------~se~~ig~~l~~~~R~~~~i~tK~~~~~~~~~~~~~~~~~ 107 (252)
+.++..+..+.+.+.|++.|-. -|.. .....+=+++++.-..++-|...... .++.
T Consensus 125 ~~e~~~~~a~~~~~~G~~~iKl---~G~~~~~~~~~~~~~~~d~e~v~avR~avG~d~~L~vDaN~----------~~~~ 191 (405)
T 3rr1_A 125 RPADVIAGMKALQAGGFDHFKL---NGCEEMGIIDTSRAVDAAVARVAEIRSAFGNTVEFGLDFHG----------RVSA 191 (405)
T ss_dssp SHHHHHHHHHHHHHTTCCEEEE---ESCCSSSCBCSHHHHHHHHHHHHHHHHTTGGGSEEEEECCS----------CBCH
T ss_pred CHHHHHHHHHHHHHcCCCEEEE---ecCCcccccccchhHHHHHHHHHHHHHHhCCCceEEEECCC----------CCCH
Confidence 6788889999999999999986 2211 01122234555422234444433321 2345
Q ss_pred HHHHHHHHHHHHHcCCCcccEEEccCCCCCCCHHHHHHHHHHHHHcCCccEE-EccCCCHHHHHHHhhcCCceEEeeecC
Q 025500 108 DYVRSCCEASLKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYI-GLSEASPGTIRRAHAVHPITAVQMEWS 186 (252)
Q Consensus 108 ~~i~~~~~~sL~~Lg~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~G~ir~i-Gvs~~~~~~l~~~~~~~~~~~~q~~~~ 186 (252)
+...+ +-+.|+.++++++ +.|-... .++.+.+++++-.|.-+ |=+-++.+.++++++....+++|+..+
T Consensus 192 ~~A~~-~~~~L~~~~i~~i-----EeP~~~~----d~~~~~~l~~~~~iPIa~dE~i~~~~~~~~~l~~~a~d~v~~d~~ 261 (405)
T 3rr1_A 192 PMAKV-LIKELEPYRPLFI-----EEPVLAE----QAETYARLAAHTHLPIAAGERMFSRFDFKRVLEAGGVSILQPDLS 261 (405)
T ss_dssp HHHHH-HHHHHGGGCCSCE-----ECSSCCS----STHHHHHHHTTCSSCEEECTTCCSHHHHHHHHHHCCCSEECCBTT
T ss_pred HHHHH-HHHHHHhcCCCEE-----ECCCCcc----cHHHHHHHHhcCCCCEEecCCcCCHHHHHHHHHHhCCCeEEEChh
Confidence 44433 3345677766554 4554322 35777888877555533 445578899999998888999999887
Q ss_pred ccccchh-hhHHHHHHHhCCeEEeccc
Q 025500 187 LWTRDIE-EEIIPLCRELGIGIVPYSP 212 (252)
Q Consensus 187 ~~~~~~~-~~l~~~~~~~gi~v~a~sp 212 (252)
..-.-.+ ..+.+.|+++|+.++..+.
T Consensus 262 ~~GGitea~kia~lA~~~gi~v~~h~~ 288 (405)
T 3rr1_A 262 HAGGITECVKIAAMAEAYDVALAPHCP 288 (405)
T ss_dssp TTTHHHHHHHHHHHHHTTTCEECCBCC
T ss_pred hcCCHHHHHHHHHHHHHcCCEEEeCCC
Confidence 7543222 7899999999999988764
|
| >4dye_A Isomerase; enolase family protein, EFI, enzym function initiative; 1.60A {Streptomyces coelicolor} PDB: 2oqh_A | Back alignment and structure |
|---|
Probab=91.19 E-value=2.5 Score=37.13 Aligned_cols=152 Identities=11% Similarity=0.118 Sum_probs=95.1
Q ss_pred HHHHHHHHHHHHHC-CCCEEeCcCCcCCCcHHHHHHHHHhcCCCCCEEEEeccCccCCCCcccccCCChHHHHHHHHHHH
Q 025500 40 EEDGISMIKHAFSK-GITFFDTADVYGQNANEVLLGKALKQLPREKIQVATKFGIAGIGVAGVIVKGAPDYVRSCCEASL 118 (252)
Q Consensus 40 ~~~~~~~l~~A~~~-Gin~~Dta~~Yg~g~se~~ig~~l~~~~R~~~~i~tK~~~~~~~~~~~~~~~~~~~i~~~~~~sL 118 (252)
.++..+..+.+++. |++.|=.--.... ..+...=+++++.- .++.|....-. .++.+...+ +-+.|
T Consensus 169 ~e~~~~~a~~~~~~~G~~~~K~KvG~~~-~~d~~~v~avR~~~-~~~~l~vDaN~----------~w~~~~A~~-~~~~l 235 (398)
T 4dye_A 169 PKAMAEHAVRVVEEGGFDAVKLKGTTDC-AGDVAILRAVREAL-PGVNLRVDPNA----------AWSVPDSVR-AGIAL 235 (398)
T ss_dssp HHHHHHHHHHHHHHHCCSEEEEECCSCH-HHHHHHHHHHHHHC-TTSEEEEECTT----------CSCHHHHHH-HHHHH
T ss_pred HHHHHHHHHHHHHhcCCCEEEEecCCCH-HHHHHHHHHHHHhC-CCCeEEeeCCC----------CCCHHHHHH-HHHHH
Confidence 57888888889998 9998865432111 12222334555522 44444443321 234544332 33455
Q ss_pred HHcCCCcccEEEccCCCCCCCHHHHHHHHHHHHHcCCc-cEEEccCCCHHHHHHHhhcCCceEEeeecCccccchh-hhH
Q 025500 119 KRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKI-KYIGLSEASPGTIRRAHAVHPITAVQMEWSLWTRDIE-EEI 196 (252)
Q Consensus 119 ~~Lg~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~G~i-r~iGvs~~~~~~l~~~~~~~~~~~~q~~~~~~~~~~~-~~l 196 (252)
+.++++ ++..|-. .++.+.+++++-.+ -+.|=+-++.+.+.++++....+++|+..+..-.-.+ ..+
T Consensus 236 ~~~~i~-----~iEqP~~------d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~a~d~v~~k~~~~GGit~~~~i 304 (398)
T 4dye_A 236 EELDLE-----YLEDPCV------GIEGMAQVKAKVRIPLCTNMCVVRFEDFAPAMRLNAVDVIHGDVYKWGGIAATKAL 304 (398)
T ss_dssp GGGCCS-----EEECCSS------HHHHHHHHHHHCCSCEEESSSCCSGGGHHHHHHTTCCSEEEECHHHHTSHHHHHHH
T ss_pred hhcCCC-----EEcCCCC------CHHHHHHHHhhCCCCEEeCCcCCCHHHHHHHHHhCCCCEEEeCccccCCHHHHHHH
Confidence 666544 4455533 47778888876444 3445555788899999988889999998766443212 779
Q ss_pred HHHHHHhCCeEEecccCcc
Q 025500 197 IPLCRELGIGIVPYSPLGR 215 (252)
Q Consensus 197 ~~~~~~~gi~v~a~spl~~ 215 (252)
.+.|+++|+.++..+.+..
T Consensus 305 a~~A~~~gi~~~~h~~~e~ 323 (398)
T 4dye_A 305 AAHCETFGLGMNLHSGGEL 323 (398)
T ss_dssp HHHHHHHTCEEEECCSCCC
T ss_pred HHHHHHcCCeEEEcCCcch
Confidence 9999999999998875543
|
| >3qld_A Mandelate racemase/muconate lactonizing protein; structural genomics, PSI-2, isomerase; HET: MSE; 1.85A {Alicyclobacillus acidocaldarius LAA1} | Back alignment and structure |
|---|
Probab=91.06 E-value=3.6 Score=35.96 Aligned_cols=152 Identities=13% Similarity=0.068 Sum_probs=95.8
Q ss_pred CHHHHHHHHHHHHHCCCCEEeCcCCcCCCcHHHHHHHHHhc-CCCCCEEEEeccCccCCCCcccccCCChHHHHHHHHHH
Q 025500 39 SEEDGISMIKHAFSKGITFFDTADVYGQNANEVLLGKALKQ-LPREKIQVATKFGIAGIGVAGVIVKGAPDYVRSCCEAS 117 (252)
Q Consensus 39 ~~~~~~~~l~~A~~~Gin~~Dta~~Yg~g~se~~ig~~l~~-~~R~~~~i~tK~~~~~~~~~~~~~~~~~~~i~~~~~~s 117 (252)
+.++..+.++.+++.|++.|=.-- |.+...+.+ +++++ . .++.|..-.-. .++.+....
T Consensus 149 ~~e~~~~~~~~~~~~G~~~~K~Kv--~~~~d~~~v-~avR~~~--~~~~l~vDaN~----------~~~~~~A~~----- 208 (388)
T 3qld_A 149 SLDVLIQSVDAAVEQGFRRVKLKI--APGRDRAAI-KAVRLRY--PDLAIAADANG----------SYRPEDAPV----- 208 (388)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEEEC--BTTBSHHHH-HHHHHHC--TTSEEEEECTT----------CCCGGGHHH-----
T ss_pred CHHHHHHHHHHHHHhCCCeEEEEe--CcHHHHHHH-HHHHHHC--CCCeEEEECCC----------CCChHHHHH-----
Confidence 478889999999999999865432 222334444 44554 4 23333332211 133433332
Q ss_pred HHHcCCCcccEEEccCCCCCCCHHHHHHHHHHHHHcCC-ccEEEccCCCHHHHHHHhhcCCceEEeeecCccccchh-hh
Q 025500 118 LKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGK-IKYIGLSEASPGTIRRAHAVHPITAVQMEWSLWTRDIE-EE 195 (252)
Q Consensus 118 L~~Lg~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~G~-ir~iGvs~~~~~~l~~~~~~~~~~~~q~~~~~~~~~~~-~~ 195 (252)
+++| +..++.++..|-...+ ++.+.++.++-. --+.|=+-++...+.++++...++++|+..+..-.-.+ ..
T Consensus 209 ~~~l--~~~~i~~iEeP~~~~d----~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~~~~~a~d~v~~k~~~~GGit~~~~ 282 (388)
T 3qld_A 209 LRQL--DAYDLQFIEQPLPEDD----WFDLAKLQASLRTPVCLDESVRSVRELKLTARLGAARVLNVKPGRLGGFGATLR 282 (388)
T ss_dssp HHHG--GGGCCSCEECCSCTTC----HHHHHHHHHHCSSCEEESTTCCSHHHHHHHHHHTCCSEEEECHHHHTSHHHHHH
T ss_pred HHHH--hhCCCcEEECCCCccc----HHHHHHHHHhCCCCEEeCCCCCCHHHHHHHHHcCCCCEEEECchhhCCHHHHHH
Confidence 3333 2346667777755433 566677776533 34556677889999999988889999998766432212 68
Q ss_pred HHHHHHHhCCeEEecccCccc
Q 025500 196 IIPLCRELGIGIVPYSPLGRG 216 (252)
Q Consensus 196 l~~~~~~~gi~v~a~spl~~G 216 (252)
+.+.|+++|+.++..+.+..|
T Consensus 283 ia~~A~~~gi~~~~~~~~es~ 303 (388)
T 3qld_A 283 ALDVAGEAGMAAWVGGMYETG 303 (388)
T ss_dssp HHHHHHHTTCEEEECCCCCCH
T ss_pred HHHHHHHCCCeEEecCccchH
Confidence 999999999999877765443
|
| >3ro6_B Putative chloromuconate cycloisomerase; TIM barrel; 2.20A {Methylococcus capsulatus} PDB: 3rit_A | Back alignment and structure |
|---|
Probab=90.98 E-value=2.2 Score=36.88 Aligned_cols=157 Identities=9% Similarity=0.007 Sum_probs=96.7
Q ss_pred CHHHHHHHHHHHHHCCCCEEeCcCCcCCCcHHHHHHHHHhcCCCCCEEEEeccCccCCCCcccccCCChHHHHHHHHHHH
Q 025500 39 SEEDGISMIKHAFSKGITFFDTADVYGQNANEVLLGKALKQLPREKIQVATKFGIAGIGVAGVIVKGAPDYVRSCCEASL 118 (252)
Q Consensus 39 ~~~~~~~~l~~A~~~Gin~~Dta~~Yg~g~se~~ig~~l~~~~R~~~~i~tK~~~~~~~~~~~~~~~~~~~i~~~~~~sL 118 (252)
+.++..+..+.+++.|++.|..--.... ..+...=+++++.-..++-+...... .++.+... .+-+.|
T Consensus 140 ~~~~~~~~a~~~~~~G~~~~K~K~G~~~-~~d~~~v~avR~~~g~~~~l~vDan~----------~~~~~~a~-~~~~~l 207 (356)
T 3ro6_B 140 PVEETLAEAREHLALGFRVLKVKLCGDE-EQDFERLRRLHETLAGRAVVRVDPNQ----------SYDRDGLL-RLDRLV 207 (356)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEEECCSCH-HHHHHHHHHHHHHHTTSSEEEEECTT----------CCCHHHHH-HHHHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEEEeCCCH-HHHHHHHHHHHHHhCCCCEEEEeCCC----------CCCHHHHH-HHHHHH
Confidence 6788888889999999999886432111 12222334555421123444444321 13454433 234567
Q ss_pred HHcCCCcccEEEccCCCCCCCHHHHHHHHHHHHHcCCc-cEEEccCCCHHHHHHHhhcC-CceEEeeecCccccchh-hh
Q 025500 119 KRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKI-KYIGLSEASPGTIRRAHAVH-PITAVQMEWSLWTRDIE-EE 195 (252)
Q Consensus 119 ~~Lg~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~G~i-r~iGvs~~~~~~l~~~~~~~-~~~~~q~~~~~~~~~~~-~~ 195 (252)
+.+++++++ .|-... .++.+.+++++-.+ -..|=+-++.+++.++++.. ..+++|+..+..-.-.+ ..
T Consensus 208 ~~~~i~~iE-----qP~~~~----d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~~~~~~~~d~v~~k~~~~GGit~~~~ 278 (356)
T 3ro6_B 208 QELGIEFIE-----QPFPAG----RTDWLRALPKAIRRRIAADESLLGPADAFALAAPPAACGIFNIKLMKCGGLAPARR 278 (356)
T ss_dssp HHTTCCCEE-----CCSCTT----CHHHHHTSCHHHHHTEEESTTCCSHHHHHHHHSSSCSCSEEEECHHHHCSHHHHHH
T ss_pred HhcCCCEEE-----CCCCCC----cHHHHHHHHhcCCCCEEeCCcCCCHHHHHHHHhcCCcCCEEEEcccccCCHHHHHH
Confidence 777766654 453322 35666666654333 34455568888999999888 89999998765432112 68
Q ss_pred HHHHHHHhCCeEEecccCccc
Q 025500 196 IIPLCRELGIGIVPYSPLGRG 216 (252)
Q Consensus 196 l~~~~~~~gi~v~a~spl~~G 216 (252)
+.+.|+++|+.++..+.+.++
T Consensus 279 i~~~a~~~gi~~~~~~~~es~ 299 (356)
T 3ro6_B 279 IATIAETAGIDLMWGCMDESR 299 (356)
T ss_dssp HHHHHHHHTCEEEECCCSCCH
T ss_pred HHHHHHHcCCEEEecCCcccH
Confidence 999999999999987766544
|
| >1chr_A Chloromuconate cycloisomerase; 3.00A {Ralstonia eutropha} PDB: 2chr_A | Back alignment and structure |
|---|
Probab=90.88 E-value=7.3 Score=33.63 Aligned_cols=155 Identities=9% Similarity=0.067 Sum_probs=91.2
Q ss_pred HHHHHHHHHHHHH-CCCCEEeCcCCcCCCcHHHHHHHHHhc-CCC-CCEEEEeccCccCCCCcccccCCChHHHHHHHHH
Q 025500 40 EEDGISMIKHAFS-KGITFFDTADVYGQNANEVLLGKALKQ-LPR-EKIQVATKFGIAGIGVAGVIVKGAPDYVRSCCEA 116 (252)
Q Consensus 40 ~~~~~~~l~~A~~-~Gin~~Dta~~Yg~g~se~~ig~~l~~-~~R-~~~~i~tK~~~~~~~~~~~~~~~~~~~i~~~~~~ 116 (252)
.++..+....+++ .|++.|-.--...+-..+...=+++++ .+. -.+.| ..... ++.+...+ +-+
T Consensus 143 ~~~~~~~~~~~~~~~G~~~~KiKvg~~~~~~d~~~v~avR~~~g~~~~l~v--Dan~~----------~~~~~a~~-~~~ 209 (370)
T 1chr_A 143 TKRDLDSAVEMIERRRHNRFKVKLGFRSPQDDLIHMEALSNSLGSKAYLRV--DVNQA----------WDEQVASV-YIP 209 (370)
T ss_dssp HHHHHHHHHHHHHTTCCCEEEEECSSSCSHHHHHHHHHHHHHSSTTCCEEE--ECTTC----------CCTTHHHH-HTH
T ss_pred cHHHHHHHHHHHHHCCCCEEEEecCCCCHHHHHHHHHHHHHhcCCCCEEEE--ECCCC----------CCHHHHHH-HHH
Confidence 3444444455555 799987753221111223333356665 332 34444 33211 23332222 234
Q ss_pred HHHHcCCCcccEEEccCCCCCCCHHHHHHHHHHHHHcCCcc-EEEccCCCHHHHHHHhhcCCceEEeeecCccccchh-h
Q 025500 117 SLKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIK-YIGLSEASPGTIRRAHAVHPITAVQMEWSLWTRDIE-E 194 (252)
Q Consensus 117 sL~~Lg~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~G~ir-~iGvs~~~~~~l~~~~~~~~~~~~q~~~~~~~~~~~-~ 194 (252)
.|+.+ ++.++..|-... .++.+.+++++-.+. ..|=+-++.+.+.++++....+++|+..+..-.-.+ .
T Consensus 210 ~l~~~-----~i~~iEqP~~~~----~~~~~~~l~~~~~iPia~dE~~~~~~~~~~~~~~~~~d~v~~k~~~~GGit~~~ 280 (370)
T 1chr_A 210 ELEAL-----GVELIEQPVGRE----NTQALRRLSDNNRVAIMADESLSTLASAFDLARDRSVDVFSLKLCNMGGVSATQ 280 (370)
T ss_dssp HHHTT-----TEEEEECCSCTT----CHHHHHHHHHHSCSEEEESSSCCSHHHHHHHHTTTSCSEEEECTTTSCSHHHHH
T ss_pred HHHhc-----CCCEEECCCCcc----cHHHHHHHHhhCCCCEEeCCCcCCHHHHHHHHHcCCCCEEEECccccCCHHHHH
Confidence 44544 455666665432 366777787765544 334455888999999988889999998877543222 7
Q ss_pred hHHHHHHHhCCeEEecccCccc
Q 025500 195 EIIPLCRELGIGIVPYSPLGRG 216 (252)
Q Consensus 195 ~l~~~~~~~gi~v~a~spl~~G 216 (252)
.+.+.|+++|+.++..+.+.+|
T Consensus 281 ~i~~~A~~~g~~~~~~~~~es~ 302 (370)
T 1chr_A 281 KIAAVAEASGIASYGGTMLDST 302 (370)
T ss_dssp HHHHHHHHHTCEEEECCSCCTT
T ss_pred HHHHHHHHcCCeEEecCCCccH
Confidence 8999999999999987776654
|
| >1kko_A 3-methylaspartate ammonia-lyase; enolase superfamily, TIM barrel; 1.33A {Citrobacter amalonaticus} SCOP: c.1.11.2 d.54.1.1 PDB: 1kkr_A* | Back alignment and structure |
|---|
Probab=90.76 E-value=2.9 Score=36.96 Aligned_cols=106 Identities=13% Similarity=0.030 Sum_probs=72.6
Q ss_pred CChHHHHHHHHHHHHHcCCCcccEEEccCCCCCCCHHHHHHHHHHHHHc------CCccEEEccCCCHHHHHHHhhcCCc
Q 025500 105 GAPDYVRSCCEASLKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEE------GKIKYIGLSEASPGTIRRAHAVHPI 178 (252)
Q Consensus 105 ~~~~~i~~~~~~sL~~Lg~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~------G~ir~iGvs~~~~~~l~~~~~~~~~ 178 (252)
++++...+ +-+.|+.++.. +++ ++..|-......+.|+.+.++.++ +.--..|=+-++.+.+.++++....
T Consensus 249 ~~~~~A~~-~~~~L~~~~~~-~~l-~iEqP~~~~~~~~d~~~~~~l~~~l~~~g~~ipIa~dE~~~~~~~~~~~i~~~a~ 325 (413)
T 1kko_A 249 MDPVRCAE-YIASLEKEAQG-LPL-YIEGPVDAGNKPDQIRMLTAITKELTRLGSGVKIVADEWCNTYQDIVDFTDAGSC 325 (413)
T ss_dssp TCHHHHHH-HHHHTGGGGTT-SCE-EEECCCCCSSHHHHHHHHHHHHHHHHHHTCCCEEEECTTCCSHHHHHHHHHTTCC
T ss_pred CCHHHHHH-HHHHHHhccCC-cce-EEECCcCCCCCcccHHHHHHHHHhcccCCCCCcEEcCCCCCCHHHHHHHHHhCCC
Confidence 45555443 33334554442 665 888885433234668888888876 3333445556788999999988889
Q ss_pred eEEeeecCccccchh-hhHHHHHHHhCCeEEecccC
Q 025500 179 TAVQMEWSLWTRDIE-EEIIPLCRELGIGIVPYSPL 213 (252)
Q Consensus 179 ~~~q~~~~~~~~~~~-~~l~~~~~~~gi~v~a~spl 213 (252)
+++|+..+-.-.-.+ ..+.+.|+++|+.++..+..
T Consensus 326 d~i~ik~~~~GGitea~~i~~~A~~~gi~~~~~~~~ 361 (413)
T 1kko_A 326 HMVQIKTPDLGGIHNIVDAVLYCNKHGMEAYQGGTC 361 (413)
T ss_dssp SEEEECGGGGSSTHHHHHHHHHHHHHTCEEEECCCT
T ss_pred CEEEeCccccCCHHHHHHHHHHHHHcCCeEEecCCC
Confidence 999998876543222 78999999999999988775
|
| >3stp_A Galactonate dehydratase, putative; PSI biology, structural genomics, NEW YORK structural genomi research consortium; 1.88A {Labrenzia aggregata iam 12614} PDB: 3sqs_A 3ssz_A | Back alignment and structure |
|---|
Probab=90.70 E-value=4.9 Score=35.48 Aligned_cols=153 Identities=12% Similarity=0.077 Sum_probs=96.5
Q ss_pred CHHHHHHHHHHHHHCCCCEEeCcCCcCC--C----cHHHHHHHHHhcCCCCCEEEEeccCccCCCCcccccCCChHHHHH
Q 025500 39 SEEDGISMIKHAFSKGITFFDTADVYGQ--N----ANEVLLGKALKQLPREKIQVATKFGIAGIGVAGVIVKGAPDYVRS 112 (252)
Q Consensus 39 ~~~~~~~~l~~A~~~Gin~~Dta~~Yg~--g----~se~~ig~~l~~~~R~~~~i~tK~~~~~~~~~~~~~~~~~~~i~~ 112 (252)
+.++..+..+.+.+.|++.|..--..++ | +.....=+++++.-..++-|...... .++.+...+
T Consensus 179 ~~e~~~~~a~~~~~~Gf~~iKik~g~gp~dg~~~~~~die~v~avReavG~d~~L~vDaN~----------~~~~~~Ai~ 248 (412)
T 3stp_A 179 SIEAMQKEAEEAMKGGYKAFKSRFGYGPKDGMPGMRENLKRVEAVREVIGYDNDLMLECYM----------GWNLDYAKR 248 (412)
T ss_dssp CHHHHHHHHHHHHTTTCSEEEEECCCCGGGHHHHHHHHHHHHHHHHHHHCSSSEEEEECTT----------CSCHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEEecccCcccccchHHHHHHHHHHHHHHcCCCCeEEEECCC----------CCCHHHHHH
Confidence 6788888999999999999886533321 1 11122224455421233444444321 245554443
Q ss_pred HHHHHHHHcCCCcccEEEccCCCCCCCHHHHHHHHHHHHHcCCcc-EEEccCCCHHHHHHHhhcCCceEEeeecCccccc
Q 025500 113 CCEASLKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIK-YIGLSEASPGTIRRAHAVHPITAVQMEWSLWTRD 191 (252)
Q Consensus 113 ~~~~sL~~Lg~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~G~ir-~iGvs~~~~~~l~~~~~~~~~~~~q~~~~~~~~~ 191 (252)
+-+.|+.++++++ ..|-... .++.+.+++++-.|. ..|=+-++.+.++++++....+++|+..+..-.-
T Consensus 249 -~~~~Le~~~i~~i-----EeP~~~~----d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~li~~~a~D~v~ik~~~~GGi 318 (412)
T 3stp_A 249 -MLPKLAPYEPRWL-----EEPVIAD----DVAGYAELNAMNIVPISGGEHEFSVIGCAELINRKAVSVLQYDTNRVGGI 318 (412)
T ss_dssp -HHHHHGGGCCSEE-----ECCSCTT----CHHHHHHHHHTCSSCEEECTTCCSHHHHHHHHHTTCCSEECCCHHHHTHH
T ss_pred -HHHHHHhcCCCEE-----ECCCCcc----cHHHHHHHHhCCCCCEEeCCCCCCHHHHHHHHHcCCCCEEecChhhcCCH
Confidence 3345677766544 4554322 367788888875554 3344558889999999988899999987664321
Q ss_pred h-hhhHHHHHHHhCCeEEecc
Q 025500 192 I-EEEIIPLCRELGIGIVPYS 211 (252)
Q Consensus 192 ~-~~~l~~~~~~~gi~v~a~s 211 (252)
. -..+.+.|+++|+.++..+
T Consensus 319 t~a~kia~~A~a~gi~v~~h~ 339 (412)
T 3stp_A 319 TAAQKINAIAEAAQIPVIPHA 339 (412)
T ss_dssp HHHHHHHHHHHHHTCCBCCSS
T ss_pred HHHHHHHHHHHHcCCEEEecc
Confidence 1 2778999999999998776
|
| >3fcp_A L-Ala-D/L-Glu epimerase, A muconate lactonizing enzyme; structural genomics, nysgrc,target 9450E, PSI-2; 1.80A {Klebsiella pneumoniae subsp} | Back alignment and structure |
|---|
Probab=90.69 E-value=4.6 Score=35.13 Aligned_cols=158 Identities=8% Similarity=-0.045 Sum_probs=90.5
Q ss_pred CHHHHHHHHHHHHH-CCCCEEeCcCCcCCCcHHHHHHHHHhcCCCCCEEEEeccCccCCCCcccccCCChHHHHHHHHHH
Q 025500 39 SEEDGISMIKHAFS-KGITFFDTADVYGQNANEVLLGKALKQLPREKIQVATKFGIAGIGVAGVIVKGAPDYVRSCCEAS 117 (252)
Q Consensus 39 ~~~~~~~~l~~A~~-~Gin~~Dta~~Yg~g~se~~ig~~l~~~~R~~~~i~tK~~~~~~~~~~~~~~~~~~~i~~~~~~s 117 (252)
+.++..+....+++ .|++.|-.--...+-..+...=+++++.-.+++.|....-. .++.+...+ +-+.
T Consensus 147 ~~~~~~~~~~~~~~~~G~~~~KiKvg~~~~~~d~~~v~avR~a~g~~~~l~vDaN~----------~~~~~~A~~-~~~~ 215 (381)
T 3fcp_A 147 DTAKDIAEGEKLLAEGRHRAFKLKIGARELATDLRHTRAIVEALGDRASIRVDVNQ----------AWDAATGAK-GCRE 215 (381)
T ss_dssp CHHHHHHHHHHHTC----CEEEEECCSSCHHHHHHHHHHHHHHTCTTCEEEEECTT----------CBCHHHHHH-HHHH
T ss_pred ChHHHHHHHHHHHHhCCCCEEEEecCCCChHHHHHHHHHHHHHcCCCCeEEEECCC----------CCCHHHHHH-HHHH
Confidence 45555555566666 59998875321111012222234555522234444444322 134444332 3345
Q ss_pred HHHcCCCcccEEEccCCCCCCCHHHHHHHHHHHHHcCCc-cEEEccCCCHHHHHHHhhcCCceEEeeecCccccch-hhh
Q 025500 118 LKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKI-KYIGLSEASPGTIRRAHAVHPITAVQMEWSLWTRDI-EEE 195 (252)
Q Consensus 118 L~~Lg~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~G~i-r~iGvs~~~~~~l~~~~~~~~~~~~q~~~~~~~~~~-~~~ 195 (252)
|+.+++ .++..|-... .++.+.+++++-.+ -..|=+-++...+.++++...++++|+..+..-.-. -..
T Consensus 216 l~~~~i-----~~iEeP~~~~----d~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~~~~~a~d~v~~k~~~~GGit~~~~ 286 (381)
T 3fcp_A 216 LAAMGV-----DLIEQPVSAH----DNAALVRLSQQIETAILADEAVATAYDGYQLAQQGFTGAYALKIAKAGGPNSVLA 286 (381)
T ss_dssp HHHTTC-----SEEECCBCTT----CHHHHHHHHHHSSSEEEESTTCCSHHHHHHHHHTTCCSEEEECHHHHTSTTHHHH
T ss_pred HhhcCc-----cceeCCCCcc----cHHHHHHHHHhCCCCEEECCCcCCHHHHHHHHHcCCCCEEEecccccCCHHHHHH
Confidence 566554 4556664332 36777777776443 344556688899999998888999999876543221 278
Q ss_pred HHHHHHHhCCeEEecccCccc
Q 025500 196 IIPLCRELGIGIVPYSPLGRG 216 (252)
Q Consensus 196 l~~~~~~~gi~v~a~spl~~G 216 (252)
+.+.|+++|+.++..+.+.+|
T Consensus 287 ia~~A~~~gi~~~~~~~~es~ 307 (381)
T 3fcp_A 287 LARVAQAAGIGLYGGTMLEGT 307 (381)
T ss_dssp HHHHHHHHTCEEEECCSCCCH
T ss_pred HHHHHHHcCCceecCCCCccH
Confidence 999999999999987776543
|
| >4h1z_A Enolase Q92ZS5; dehydratase, magnesium binding site, enzyme function initiat isomerase; 2.01A {Sinorhizobium meliloti} PDB: 2ppg_A | Back alignment and structure |
|---|
Probab=90.38 E-value=7.2 Score=34.30 Aligned_cols=154 Identities=14% Similarity=0.164 Sum_probs=97.8
Q ss_pred CHHHHHHHHHHHHHCCCCEEeCcCCcCCCcHHHHHHHHHhc--CCCCCEEEEeccCccCCCCcccccCCChHHHHHHHHH
Q 025500 39 SEEDGISMIKHAFSKGITFFDTADVYGQNANEVLLGKALKQ--LPREKIQVATKFGIAGIGVAGVIVKGAPDYVRSCCEA 116 (252)
Q Consensus 39 ~~~~~~~~l~~A~~~Gin~~Dta~~Yg~g~se~~ig~~l~~--~~R~~~~i~tK~~~~~~~~~~~~~~~~~~~i~~~~~~ 116 (252)
+.++..+..+.+.+.|++.|=.....+.....+.+ +++++ .+.-++.|=.-- .++.+...+
T Consensus 188 ~~~~~~~~a~~~~~~G~~~~K~k~g~~~~~~~~~v-~~vR~~~g~~~~l~vDaN~------------~~~~~~A~~---- 250 (412)
T 4h1z_A 188 TRAKRAELAAAWQAKGFSSFKFASPVADDGVAKEM-EILRERLGPAVRIACDMHW------------AHTASEAVA---- 250 (412)
T ss_dssp SHHHHHHHHHHHHHTTCCEEEEEGGGCTTCHHHHH-HHHHHHHCSSSEEEEECCS------------CCCHHHHHH----
T ss_pred cHHHHHHHHHHHHhcCcceeccccccchhhHHHHH-HHHHhccCCeEEEEecccc------------CCCHHHHHH----
Confidence 56777788888899999988755433322233333 34444 233333331111 234444332
Q ss_pred HHHHcCCCcccEEEccCCCCCCCHHHHHHHHHHHHHcCCc-cEEEccCCCHHHHHHHhhcCCceEEeeecCccccch--h
Q 025500 117 SLKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKI-KYIGLSEASPGTIRRAHAVHPITAVQMEWSLWTRDI--E 193 (252)
Q Consensus 117 sL~~Lg~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~G~i-r~iGvs~~~~~~l~~~~~~~~~~~~q~~~~~~~~~~--~ 193 (252)
.+++| +..++.++..|-...+ ++.+.+++++-.+ -+.|=+-++...+.++++...++++|....- ... -
T Consensus 251 ~~~~l--~~~~l~~iEqP~~~~d----~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~a~div~~d~~~--GGit~~ 322 (412)
T 4h1z_A 251 LIKAM--EPHGLWFAEAPVRTED----IDGLARVAASVSTAIAVGEEWRTVHDMVPRVARRALAIVQPEMGH--KGITQF 322 (412)
T ss_dssp HHHHH--GGGCEEEEECCSCTTC----HHHHHHHHHHCSSEEEECTTCCSHHHHHHHHHTTCCSEECCCHHH--HHHHHH
T ss_pred HHHhh--cccccceecCCCCccc----hHHHHHHHhhcCCccccCCcccchHhHHHHHHcCCCCEEEecCCC--CChHHH
Confidence 23333 2357888888865433 5667777776444 3455667889999999888889999998642 221 2
Q ss_pred hhHHHHHHHhCCeEEecccCcccc
Q 025500 194 EEIIPLCRELGIGIVPYSPLGRGF 217 (252)
Q Consensus 194 ~~l~~~~~~~gi~v~a~spl~~G~ 217 (252)
..+.+.|+++|+.++..++++.|+
T Consensus 323 ~kia~~A~~~gi~v~~h~~~~~~i 346 (412)
T 4h1z_A 323 MRIGAYAHVHHIKVIPHATIGAGI 346 (412)
T ss_dssp HHHHHHHHHTTCEECCCCCSSCSH
T ss_pred HHHHHHHHHCCCcEEecCCcchHH
Confidence 678899999999999998887653
|
| >3sjn_A Mandelate racemase/muconate lactonizing protein; enolase, magnesium binding site, lyase; 1.90A {Shewanella pealeana} | Back alignment and structure |
|---|
Probab=89.59 E-value=3.4 Score=35.87 Aligned_cols=153 Identities=13% Similarity=0.139 Sum_probs=93.5
Q ss_pred HHHHHHHHHHHHHCCCCEEeCcCC-cCCC-cHHHHHHHHHhcCCCCCEEEEeccCccCCCCcccccCCC-hHHHHHHHHH
Q 025500 40 EEDGISMIKHAFSKGITFFDTADV-YGQN-ANEVLLGKALKQLPREKIQVATKFGIAGIGVAGVIVKGA-PDYVRSCCEA 116 (252)
Q Consensus 40 ~~~~~~~l~~A~~~Gin~~Dta~~-Yg~g-~se~~ig~~l~~~~R~~~~i~tK~~~~~~~~~~~~~~~~-~~~i~~~~~~ 116 (252)
.++..+..+.+.+.|++.|..--. +|.. ..+...=+++++.-..++-|...... .++ .+...+ +-+
T Consensus 147 ~e~~~~~a~~~~~~Gf~~iKlk~g~~g~~~~~d~~~v~avR~a~g~~~~l~vDan~----------~~~d~~~A~~-~~~ 215 (374)
T 3sjn_A 147 PEDNVAIVQGLKDQGFSSIKFGGGVMGDDPDTDYAIVKAVREAAGPEMEVQIDLAS----------KWHTCGHSAM-MAK 215 (374)
T ss_dssp GGGGHHHHHHHHTTTCSEEEEECTTTTSCHHHHHHHHHHHHHHHCSSSEEEEECTT----------TTCSHHHHHH-HHH
T ss_pred HHHHHHHHHHHHHcCCCEEEeccCCCCCCHHHHHHHHHHHHHHhCCCCeEEEECCC----------CCCCHHHHHH-HHH
Confidence 377778888899999999886432 2210 12222334555521233444434321 134 444332 334
Q ss_pred HHHHcCCCcccEEEccCCCCCCCHHHHHHHHHHHHHcCCccEE-EccCCCHHHHHHHhhcCCceEEeeecCccccchh-h
Q 025500 117 SLKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYI-GLSEASPGTIRRAHAVHPITAVQMEWSLWTRDIE-E 194 (252)
Q Consensus 117 sL~~Lg~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~G~ir~i-Gvs~~~~~~l~~~~~~~~~~~~q~~~~~~~~~~~-~ 194 (252)
.|+.+++++ +..|-... .++.+.+++++-.+.-. |=+-++.+.++++++....+++|+..+..-.-.+ .
T Consensus 216 ~l~~~~i~~-----iEqP~~~~----~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~l~~~~~d~v~~k~~~~GGit~~~ 286 (374)
T 3sjn_A 216 RLEEFNLNW-----IEEPVLAD----SLISYEKLSRQVSQKIAGGESLTTRYEFQEFITKSNADIVQPDITRCGGITEMK 286 (374)
T ss_dssp HSGGGCCSE-----EECSSCTT----CHHHHHHHHHHCSSEEEECTTCCHHHHHHHHHHHHCCSEECCBTTTSSHHHHHH
T ss_pred HhhhcCceE-----EECCCCcc----cHHHHHHHHhhCCCCEEeCCCcCCHHHHHHHHHcCCCCEEEeCccccCCHHHHH
Confidence 556666554 45554322 36777888877555433 3344678889999888889999998877543222 6
Q ss_pred hHHHHHHHhCCeEEeccc
Q 025500 195 EIIPLCRELGIGIVPYSP 212 (252)
Q Consensus 195 ~l~~~~~~~gi~v~a~sp 212 (252)
.+.+.|+++|+.++..+.
T Consensus 287 ~ia~~A~~~gi~~~~h~~ 304 (374)
T 3sjn_A 287 KIYDIAQMNGTQLIPHGF 304 (374)
T ss_dssp HHHHHHHHHTCEECCBCC
T ss_pred HHHHHHHHcCCEEEecCC
Confidence 899999999999998776
|
| >2chr_A Chloromuconate cycloisomerase; 3.00A {Cupriavidus necator} SCOP: c.1.11.2 d.54.1.1 | Back alignment and structure |
|---|
Probab=89.58 E-value=5.6 Score=34.29 Aligned_cols=158 Identities=8% Similarity=0.027 Sum_probs=95.7
Q ss_pred CHHHHHHHHHHHHHCCCCEEeCcCCcCCCcHHHHHHHHHhcCCCCCEEEEeccCccCCCCcccccCCChHHHHHHHHHHH
Q 025500 39 SEEDGISMIKHAFSKGITFFDTADVYGQNANEVLLGKALKQLPREKIQVATKFGIAGIGVAGVIVKGAPDYVRSCCEASL 118 (252)
Q Consensus 39 ~~~~~~~~l~~A~~~Gin~~Dta~~Yg~g~se~~ig~~l~~~~R~~~~i~tK~~~~~~~~~~~~~~~~~~~i~~~~~~sL 118 (252)
+++...+..+.+.+.|++.|=.--...+-..+...-+++++.-.+++.|..-... .++++...+- -+.|
T Consensus 143 ~~~~~~~~~~~~~~~g~~~~K~Kvg~~~~~~d~~~v~avr~~~g~~~~l~vDaN~----------~~~~~~A~~~-~~~l 211 (370)
T 2chr_A 143 TKRDLDSAVEMIERRRHNRFKVKLGFRSPQDDLIHMEALSNSLGSKAYLRVDVNQ----------AWDEQVASVY-IPEL 211 (370)
T ss_dssp HHHHHHHHHHHHHTTSCCEEEEECSSSCHHHHHHHHHHHHHHTTTTSEEEEECTT----------CCCTHHHHHH-HHHH
T ss_pred hhhhHHHHHHHHhhcccceeecccccCChHHHHHHHHHHHHhcCCCcEEEecCCC----------CCCHHHHHHH-HHHH
Confidence 4566777778888889987765433221111112223444422233333322211 2344443322 2333
Q ss_pred HHcCCCcccEEEccCCCCCCCHHHHHHHHHHHHHcCCcc-EEEccCCCHHHHHHHhhcCCceEEeeecCccccchh-hhH
Q 025500 119 KRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIK-YIGLSEASPGTIRRAHAVHPITAVQMEWSLWTRDIE-EEI 196 (252)
Q Consensus 119 ~~Lg~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~G~ir-~iGvs~~~~~~l~~~~~~~~~~~~q~~~~~~~~~~~-~~l 196 (252)
+. .++.++..|-...+ ++.+.+++++-.|. +.|=+-++...+.++++...++++|+.....-.-.+ ..+
T Consensus 212 ~~-----~~~~~iEeP~~~~d----~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~~~~~a~d~i~~d~~~~GGit~~~~i 282 (370)
T 2chr_A 212 EA-----LGVELIEQPVGREN----TQALRRLSDNNRVAIMADESLSTLASAFDLARDRSVDVFSLKLCNMGGVSATQKI 282 (370)
T ss_dssp HT-----TTCCEEECCSCSSC----HHHHHHHHHHCSSEEEESSSCCSHHHHHHHHTTTCCSEECCCHHHHTSHHHHHHH
T ss_pred Hh-----cCCceecCCCChhh----hhhhhHHhhhccCCccCCccCCCHHHHHHHHHcCCCcEEEeCCcccCCHHHHHHH
Confidence 43 46667888755433 56778888776553 445566889999999988889999998765432212 779
Q ss_pred HHHHHHhCCeEEecccCccc
Q 025500 197 IPLCRELGIGIVPYSPLGRG 216 (252)
Q Consensus 197 ~~~~~~~gi~v~a~spl~~G 216 (252)
.+.|+++|+.++..+.+.++
T Consensus 283 a~~A~~~gi~~~~~~~~~~~ 302 (370)
T 2chr_A 283 AAVAEASGIASYGGTMLDST 302 (370)
T ss_dssp HHHHHHHTCEECCCCCSCCH
T ss_pred HHHHHHcCCeEEeCCCcccH
Confidence 99999999999887777654
|
| >2oz8_A MLL7089 protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.48A {Mesorhizobium loti} | Back alignment and structure |
|---|
Probab=89.18 E-value=11 Score=32.87 Aligned_cols=149 Identities=15% Similarity=-0.007 Sum_probs=92.4
Q ss_pred CHHHHHHHHHHHHHCCCCEEeCcCCcCCCcHHHHHHHHHhcCCCCCEEEEeccCccCCCCcccccCCChHHHHHHHHHHH
Q 025500 39 SEEDGISMIKHAFSKGITFFDTADVYGQNANEVLLGKALKQLPREKIQVATKFGIAGIGVAGVIVKGAPDYVRSCCEASL 118 (252)
Q Consensus 39 ~~~~~~~~l~~A~~~Gin~~Dta~~Yg~g~se~~ig~~l~~~~R~~~~i~tK~~~~~~~~~~~~~~~~~~~i~~~~~~sL 118 (252)
+.++..+....+.+.|++.|..--.-++-.....+=+++++.--.++.|...... .++.+...+-++. |
T Consensus 145 ~~~~~~~~a~~~~~~Gf~~vKik~g~~~~~~~~e~v~avR~a~G~~~~l~vDan~----------~~~~~~a~~~~~~-l 213 (389)
T 2oz8_A 145 DDDAFVSLFSHAASIGYSAFKIKVGHRDFDRDLRRLELLKTCVPAGSKVMIDPNE----------AWTSKEALTKLVA-I 213 (389)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEEECCCSSHHHHHHHHHHHHTTSCTTCEEEEECTT----------CBCHHHHHHHHHH-H
T ss_pred CHHHHHHHHHHHHHhCCCEEEEccCCCCHHHHHHHHHHHHHhhCCCCeEEEECCC----------CCCHHHHHHHHHH-H
Confidence 6788888888899999999885321111011222234555422234545444321 2456665555544 7
Q ss_pred HH--cCCCcccEEEccCCCCCCCHHHHHHHHHHHHHcC-CccEEEccCCCHHHHHHHhhcCCceEEeeecCccccchhhh
Q 025500 119 KR--LDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEG-KIKYIGLSEASPGTIRRAHAVHPITAVQMEWSLWTRDIEEE 195 (252)
Q Consensus 119 ~~--Lg~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~G-~ir~iGvs~~~~~~l~~~~~~~~~~~~q~~~~~~~~~~~~~ 195 (252)
+. ++++ ++..|-.. +.++.+.+++++- .|--++--+.+.+.++++++....+++|+. .=+. ....
T Consensus 214 ~~~g~~i~-----~iEqP~~~----~~~~~~~~l~~~~~~iPIa~dE~~~~~~~~~~i~~~~~d~v~ik-GGit--~a~~ 281 (389)
T 2oz8_A 214 REAGHDLL-----WVEDPILR----HDHDGLRTLRHAVTWTQINSGEYLDLQGKRLLLEAHAADILNVH-GQVT--DVMR 281 (389)
T ss_dssp HHTTCCCS-----EEESCBCT----TCHHHHHHHHHHCCSSEEEECTTCCHHHHHHHHHTTCCSEEEEC-SCHH--HHHH
T ss_pred HhcCCCce-----EEeCCCCC----cCHHHHHHHHhhCCCCCEEeCCCCCHHHHHHHHHcCCCCEEEEC-cCHH--HHHH
Confidence 77 5443 45566432 2477778888775 555444433488899999988889999998 1111 1267
Q ss_pred HHHHHHHhCCeEEec
Q 025500 196 IIPLCRELGIGIVPY 210 (252)
Q Consensus 196 l~~~~~~~gi~v~a~ 210 (252)
+.+.|+++|+.++..
T Consensus 282 i~~~A~~~gi~~~~~ 296 (389)
T 2oz8_A 282 IGWLAAELGIPISIG 296 (389)
T ss_dssp HHHHHHHHTCCEEEC
T ss_pred HHHHHHHcCCeEeec
Confidence 999999999999988
|
| >3va8_A Probable dehydratase; enolase, magnesium binding site, lyase; 2.00A {Gibberella zeae} | Back alignment and structure |
|---|
Probab=89.00 E-value=5.5 Score=35.56 Aligned_cols=154 Identities=14% Similarity=0.180 Sum_probs=95.2
Q ss_pred CCHHHHHHHHHHHHHC-CCCEEeCcCCcCCCcHHHHHHHHHhc-CCCCCEEEEeccCccCCCCcccccCCChHHHHHHHH
Q 025500 38 VSEEDGISMIKHAFSK-GITFFDTADVYGQNANEVLLGKALKQ-LPREKIQVATKFGIAGIGVAGVIVKGAPDYVRSCCE 115 (252)
Q Consensus 38 ~~~~~~~~~l~~A~~~-Gin~~Dta~~Yg~g~se~~ig~~l~~-~~R~~~~i~tK~~~~~~~~~~~~~~~~~~~i~~~~~ 115 (252)
.++++..+..+.+++. |++.|=.--...+...+...=+++++ ++.-++.| -.-. .++.+...
T Consensus 190 ~~~e~~~~~a~~~~~~~Gf~~~KlKvG~~~~~~Di~~v~avRea~~~~~L~v--DaN~----------~w~~~~Ai---- 253 (445)
T 3va8_A 190 LDPEGVVKQAKKIIDEYGFKAIKLKGGVFPPADEVAAIKALHKAFPGVPLRL--DPNA----------AWTVETSK---- 253 (445)
T ss_dssp CSHHHHHHHHHHHHHHHCCSCEEEECSSSCHHHHHHHHHHHHHHSTTCCEEE--ECTT----------CBCHHHHH----
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEccCCCCHHHHHHHHHHHHHhCCCCcEee--eCCC----------CCCHHHHH----
Confidence 3678888888888875 99977643221110112222245555 43223333 2111 13443332
Q ss_pred HHHHHcCCCcccEEEccCCCCCCCHHHHHHHHHHHHHcCCc-cEEEccCCCHHHHHHHhhcCCceEEeeecCccccch-h
Q 025500 116 ASLKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKI-KYIGLSEASPGTIRRAHAVHPITAVQMEWSLWTRDI-E 193 (252)
Q Consensus 116 ~sL~~Lg~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~G~i-r~iGvs~~~~~~l~~~~~~~~~~~~q~~~~~~~~~~-~ 193 (252)
+.+++|. + + +.++..|-. .++.+.+++++-.+ -+.|=+-++...+.++++....+++|+..+..-.-. .
T Consensus 254 ~~~~~L~-~-~-l~~iEeP~~------d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~a~div~~d~~~~GGitea 324 (445)
T 3va8_A 254 WVAKELE-G-I-VEYLEDPAG------EIEGMAAVAKEASMPLATNMAVVAFDHLPPSILQDAVQVILSDHHFWGGLRKS 324 (445)
T ss_dssp HHHHHTT-T-T-CSEEESCBS------HHHHHHHHHTTCSSCEEESSSCCSGGGHHHHHHTTCCSEEEECHHHHTSHHHH
T ss_pred HHHHHHh-h-h-cCeEeecCc------CHHHHHHHHHcCCCCEEeCCccCCHHHHHHHHHcCCCCEEEecchhcCCHHHH
Confidence 3455554 2 3 677777731 47778888876443 355666688888999998888999999876543211 2
Q ss_pred hhHHHHHHHhCCeEEecccCccc
Q 025500 194 EEIIPLCRELGIGIVPYSPLGRG 216 (252)
Q Consensus 194 ~~l~~~~~~~gi~v~a~spl~~G 216 (252)
..+.+.|+++|+.+...+....|
T Consensus 325 ~kia~lA~~~gv~v~~h~~~e~~ 347 (445)
T 3va8_A 325 QTLASICATWGLRLSMHSNSHLG 347 (445)
T ss_dssp HHHHHHHHHHTCEEEECCCSCCH
T ss_pred HHHHHHHHHcCCEEEEeCCcccH
Confidence 77999999999999998876544
|
| >4a35_A Mitochondrial enolase superfamily member 1; isomerase; 1.74A {Homo sapiens} | Back alignment and structure |
|---|
Probab=88.74 E-value=11 Score=33.55 Aligned_cols=152 Identities=9% Similarity=0.048 Sum_probs=93.6
Q ss_pred CHHHHHHHHHHHHHCCCCEEeCcCCcCCCcHHHHHHHHHhcCCCCCEEEEeccCccCCCCcccccCCChHHHHHHHHHHH
Q 025500 39 SEEDGISMIKHAFSKGITFFDTADVYGQNANEVLLGKALKQLPREKIQVATKFGIAGIGVAGVIVKGAPDYVRSCCEASL 118 (252)
Q Consensus 39 ~~~~~~~~l~~A~~~Gin~~Dta~~Yg~g~se~~ig~~l~~~~R~~~~i~tK~~~~~~~~~~~~~~~~~~~i~~~~~~sL 118 (252)
++++..+..+.+++.|++.|-.--.... ..+...=+++++.-..++.|....-. .++.+...+ +-+.|
T Consensus 201 ~~e~~~~~a~~~~~~Gf~~~KlKvG~~~-~~d~~~v~avR~a~G~~~~l~vDaN~----------~~~~~~A~~-~~~~L 268 (441)
T 4a35_A 201 SDDTLKQLCAQALKDGWTRFKVKVGADL-QDDMRRCQIIRDMIGPEKTLMMDANQ----------RWDVPEAVE-WMSKL 268 (441)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEEECSSCH-HHHHHHHHHHHHHHCTTSEEEEECTT----------CCCHHHHHH-HHHHH
T ss_pred CHHHHHHHHHHHHHCCCCEEEEcCCCCH-HHHHHHHHHHHHHhCCCCeEEEECCC----------CCCHHHHHH-HHHhh
Confidence 6788889999999999999875321110 11222224455421223333333221 234443332 22334
Q ss_pred HHcCCCcccEEEccCCCCCCCHHHHHHHHHHHHH----cCCccEEEccCCCHHHHHHHhhcCCceEEeeecCccccchh-
Q 025500 119 KRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVE----EGKIKYIGLSEASPGTIRRAHAVHPITAVQMEWSLWTRDIE- 193 (252)
Q Consensus 119 ~~Lg~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~----~G~ir~iGvs~~~~~~l~~~~~~~~~~~~q~~~~~~~~~~~- 193 (252)
+. .+++++..|-...+ ++.+.++++ .+.--+.|=+-++...+.++++...++++|+..+-.-.-.+
T Consensus 269 ~~-----~~~~~iEeP~~~~d----~~~~~~l~~~l~~~~iPIa~gE~~~~~~~~~~~l~~~a~div~~d~~~~GGit~~ 339 (441)
T 4a35_A 269 AK-----FKPLWIEEPTSPDD----ILGHATISKALVPLGIGIATGEQCHNRVIFKQLLQAKALQFLQIDSCRLGSVNEN 339 (441)
T ss_dssp GG-----GCCSEEECCSCTTC----HHHHHHHHHHHGGGTCEEEECTTCCSHHHHHHHHHTTCCSEECCCTTTSSHHHHH
T ss_pred cc-----cCccEEeCCCCccc----HHHHHHHHHhccCCCCCEEeCCccccHHHHHHHHHcCCCCEEEECccccCCHHHH
Confidence 43 45667777755433 455566665 35555667777899999999988889999998877543222
Q ss_pred hhHHHHHHHhCCeEEecc
Q 025500 194 EEIIPLCRELGIGIVPYS 211 (252)
Q Consensus 194 ~~l~~~~~~~gi~v~a~s 211 (252)
..+.+.|+++|+.+...+
T Consensus 340 ~kia~lA~~~gv~v~~H~ 357 (441)
T 4a35_A 340 LSVLLMAKKFEIPVCPHA 357 (441)
T ss_dssp HHHHHHHHHTTCCBCCCC
T ss_pred HHHHHHHHHcCCEEEEeC
Confidence 779999999999986543
|
| >4e5t_A Mandelate racemase / muconate lactonizing enzyme, terminal domain protein; aldolase, structural genomics, biology; 2.90A {Labrenzia alexandrii} | Back alignment and structure |
|---|
Probab=88.63 E-value=8.6 Score=33.69 Aligned_cols=154 Identities=12% Similarity=0.052 Sum_probs=94.3
Q ss_pred CHHHHHHHHHHHHHCCCCEEeCcCC--cC--CC--------cHHHHHHHHHhcCCCCCEEEEeccCccCCCCcccccCCC
Q 025500 39 SEEDGISMIKHAFSKGITFFDTADV--YG--QN--------ANEVLLGKALKQLPREKIQVATKFGIAGIGVAGVIVKGA 106 (252)
Q Consensus 39 ~~~~~~~~l~~A~~~Gin~~Dta~~--Yg--~g--------~se~~ig~~l~~~~R~~~~i~tK~~~~~~~~~~~~~~~~ 106 (252)
+.++..+..+.+++.|++.|-.-.. |. .| .....+=+++++.-..++-|...... .++
T Consensus 151 ~~e~~~~~a~~~~~~G~~~~KlK~g~~~~~~~g~~~~~~~~~~d~~~v~avR~a~G~d~~l~vDan~----------~~~ 220 (404)
T 4e5t_A 151 DADMAAEAAAKAVDQGFTAVKFDPAGAYTIYDGHQPSLEDLERSEAFCKQIRAAVGTKADLLFGTHG----------QFT 220 (404)
T ss_dssp CHHHHHHHHHHHHHHTCSEEEECCSCCCBTTCSBCCCHHHHHHHHHHHHHHHHHHGGGSEEEECCCS----------CBC
T ss_pred CHHHHHHHHHHHHHcCCCEEeeCCCCCCcccccccccHHHHHHHHHHHHHHHHHcCCCCeEEEeCCC----------CcC
Confidence 6788888889999999999986321 11 00 01112224444421234444444321 234
Q ss_pred hHHHHHHHHHHHHHcCCCcccEEEccCCCCCCCHHHHHHHHHHHHHcCCccEE-EccCCCHHHHHHHhhcCCceEEeeec
Q 025500 107 PDYVRSCCEASLKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYI-GLSEASPGTIRRAHAVHPITAVQMEW 185 (252)
Q Consensus 107 ~~~i~~~~~~sL~~Lg~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~G~ir~i-Gvs~~~~~~l~~~~~~~~~~~~q~~~ 185 (252)
.+...+ +-+.|+.++++++ +.|-... .++.+.+++++-.|.-. |=+-++.+.++++++....+++|+..
T Consensus 221 ~~~A~~-~~~~l~~~~i~~i-----EeP~~~~----~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~a~d~v~~d~ 290 (404)
T 4e5t_A 221 VSGAKR-LARRLEAYDPLWF-----EEPIPPE----KPEDMAEVARYTSIPVATGERLCTKYEFSRVLETGAASILQMNL 290 (404)
T ss_dssp HHHHHH-HHHHHGGGCCSEE-----ECCSCTT----CHHHHHHHHHHCSSCEEECTTCCHHHHHHHHHHHTCCSEECCCT
T ss_pred HHHHHH-HHHHHhhcCCcEE-----ECCCCcc----cHHHHHHHHhhCCCCEEeCCCcCCHHHHHHHHHhCCCCEEecCc
Confidence 544433 3356677766544 4553322 36677888877555433 33446778899998888899999988
Q ss_pred Cccccchh-hhHHHHHHHhCCeEEeccc
Q 025500 186 SLWTRDIE-EEIIPLCRELGIGIVPYSP 212 (252)
Q Consensus 186 ~~~~~~~~-~~l~~~~~~~gi~v~a~sp 212 (252)
+..-.-.+ ..+.+.|+++|+.+.....
T Consensus 291 ~~~GGit~~~~ia~~A~~~gi~~~~h~~ 318 (404)
T 4e5t_A 291 GRVGGLLEAKKIAAMAECHSAQIAPHLY 318 (404)
T ss_dssp TTSSCHHHHHHHHHHHHHTTCEECCCCS
T ss_pred cccCCHHHHHHHHHHHHHcCCEEeecCC
Confidence 77543222 7799999999999976653
|
| >1wuf_A Hypothetical protein LIN2664; structural genomics, unknown function, nysgxrc target T2186, superfamily, protein structure initiative, PSI; 2.90A {Listeria innocua} SCOP: c.1.11.2 d.54.1.1 | Back alignment and structure |
|---|
Probab=88.58 E-value=7.4 Score=33.93 Aligned_cols=153 Identities=14% Similarity=0.089 Sum_probs=95.4
Q ss_pred CHHHHHHHHHHHHHCCCCEEeCcCCcCCCcHHHHHHHHHhcCCCCCEEEEeccCccCCCCcccccCCChHHHHHHHHHHH
Q 025500 39 SEEDGISMIKHAFSKGITFFDTADVYGQNANEVLLGKALKQLPREKIQVATKFGIAGIGVAGVIVKGAPDYVRSCCEASL 118 (252)
Q Consensus 39 ~~~~~~~~l~~A~~~Gin~~Dta~~Yg~g~se~~ig~~l~~~~R~~~~i~tK~~~~~~~~~~~~~~~~~~~i~~~~~~sL 118 (252)
+.++..+....+.+.|++.|-.-- |.....+.+ +++++.- .++.|..-... .++.+.. + .+
T Consensus 161 ~~e~~~~~a~~~~~~G~~~~KiKv--g~~~d~~~v-~avr~a~-~~~~l~vDaN~----------~~~~~~a-~----~~ 221 (393)
T 1wuf_A 161 NVETLLQLVNQYVDQGYERVKLKI--APNKDIQFV-EAVRKSF-PKLSLMADANS----------AYNREDF-L----LL 221 (393)
T ss_dssp CHHHHHHHHHHHHHHTCCEEEEEC--BTTBSHHHH-HHHHTTC-TTSEEEEECTT----------CCCGGGH-H----HH
T ss_pred CHHHHHHHHHHHHHHhhHhheecc--ChHHHHHHH-HHHHHHc-CCCEEEEECCC----------CCCHHHH-H----HH
Confidence 467778888888899999875321 122234444 5566522 34444433321 1344433 2 23
Q ss_pred HHcCCCcccEEEccCCCCCCCHHHHHHHHHHHHHcCCcc-EEEccCCCHHHHHHHhhcCCceEEeeecCccccchh-hhH
Q 025500 119 KRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIK-YIGLSEASPGTIRRAHAVHPITAVQMEWSLWTRDIE-EEI 196 (252)
Q Consensus 119 ~~Lg~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~G~ir-~iGvs~~~~~~l~~~~~~~~~~~~q~~~~~~~~~~~-~~l 196 (252)
++| +..++.++..|-...+ ++.+.++.++-.|. ..|=+-++...+.++++....+++|+..+..-.-.+ ..+
T Consensus 222 ~~l--~~~~i~~iEqP~~~~d----~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~i~~~a~d~v~ik~~~~GGit~~~~i 295 (393)
T 1wuf_A 222 KEL--DQYDLEMIEQPFGTKD----FVDHAWLQKQLKTRICLDENIRSVKDVEQAHSIGSCRAINLKLARVGGMSSALKI 295 (393)
T ss_dssp HTT--GGGTCSEEECCSCSSC----SHHHHHHHTTCSSEEEECTTCCSHHHHHHHHHHTCCSEEEECTGGGTSHHHHHHH
T ss_pred HHH--HhCCCeEEECCCCCcC----HHHHHHHHHhCCCCEEECCCcCCHHHHHHHHHhCCCCEEEeChhhhCCHHHHHHH
Confidence 333 2346667777754433 56667777664443 334455788899999888889999998876543222 689
Q ss_pred HHHHHHhCCeEEecccCccc
Q 025500 197 IPLCRELGIGIVPYSPLGRG 216 (252)
Q Consensus 197 ~~~~~~~gi~v~a~spl~~G 216 (252)
.+.|+++|+.++..+.+..|
T Consensus 296 a~~A~~~gi~~~~~~~~es~ 315 (393)
T 1wuf_A 296 AEYCALNEILVWCGGMLEAG 315 (393)
T ss_dssp HHHHHHTTCEEEECCCCCCH
T ss_pred HHHHHHcCCeEEecCCcccH
Confidence 99999999999988776543
|
| >3rcy_A Mandelate racemase/muconate lactonizing enzyme-LI protein; structural genomics, protein structure initiative; HET: RIB; 1.99A {Roseovarius SP} PDB: 3t4w_A | Back alignment and structure |
|---|
Probab=88.51 E-value=9.3 Score=33.90 Aligned_cols=154 Identities=8% Similarity=0.014 Sum_probs=95.7
Q ss_pred CHHHHHHHHHHHHHCCCCEEeCcCC------cCCCcH------HHHHHHHHhcCCCCCEEEEeccCccCCCCcccccCCC
Q 025500 39 SEEDGISMIKHAFSKGITFFDTADV------YGQNAN------EVLLGKALKQLPREKIQVATKFGIAGIGVAGVIVKGA 106 (252)
Q Consensus 39 ~~~~~~~~l~~A~~~Gin~~Dta~~------Yg~g~s------e~~ig~~l~~~~R~~~~i~tK~~~~~~~~~~~~~~~~ 106 (252)
+.++..+..+.+++.|++.|-.--. +|.... ...+=+++++.-..++-|....-. .++
T Consensus 146 ~~e~~~~~a~~~~~~Gf~~iKlk~g~~~~~~~G~~~~~~~~~~d~e~v~avR~avG~d~~L~vDan~----------~~t 215 (433)
T 3rcy_A 146 SADMAAESAADCVARGYTAVKFDPAGPYTLRGGHMPAMTDISLSVEFCRKIRAAVGDKADLLFGTHG----------QFT 215 (433)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEECCSCCCBTTCCBCCCHHHHHHHHHHHHHHHHHHTTSSEEEECCCS----------CBC
T ss_pred CHHHHHHHHHHHHHcCCCEEEEcCCCCcccccCCCcchhhHHHHHHHHHHHHHHhCCCCeEEEeCCC----------CCC
Confidence 6788889999999999999885321 121111 112224445421234444444321 234
Q ss_pred hHHHHHHHHHHHHHcCCCcccEEEccCCCCCCCHHHHHHHHHHHHHcCCcc-EEEccCCCHHHHHHHhhcCCceEEeeec
Q 025500 107 PDYVRSCCEASLKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIK-YIGLSEASPGTIRRAHAVHPITAVQMEW 185 (252)
Q Consensus 107 ~~~i~~~~~~sL~~Lg~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~G~ir-~iGvs~~~~~~l~~~~~~~~~~~~q~~~ 185 (252)
.+...+ +-+.|+.+++++ ++.|-... .++.+.+++++-.|. ..|=+-++.+.++++++....+++|+..
T Consensus 216 ~~~A~~-~~~~Le~~~i~~-----iEeP~~~~----~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~l~~g~~D~v~~d~ 285 (433)
T 3rcy_A 216 TAGAIR-LGQAIEPYSPLW-----YEEPVPPD----NVGAMAQVARAVRIPVATGERLTTKAEFAPVLREGAAAILQPAL 285 (433)
T ss_dssp HHHHHH-HHHHHGGGCCSE-----EECCSCTT----CHHHHHHHHHHSSSCEEECTTCCSHHHHHHHHHTTCCSEECCCH
T ss_pred HHHHHH-HHHHhhhcCCCE-----EECCCChh----hHHHHHHHHhccCCCEEecCCCCCHHHHHHHHHcCCCCEEEeCc
Confidence 544432 335667766554 45554322 367778888775554 3444558889999999888899999987
Q ss_pred Cccccchh-hhHHHHHHHhCCeEEeccc
Q 025500 186 SLWTRDIE-EEIIPLCRELGIGIVPYSP 212 (252)
Q Consensus 186 ~~~~~~~~-~~l~~~~~~~gi~v~a~sp 212 (252)
+-.-.-.+ ..+.+.|+++|+.+...++
T Consensus 286 ~~~GGit~~~kia~lA~~~gv~~~~h~~ 313 (433)
T 3rcy_A 286 GRAGGIWEMKKVAAMAEVYNAQMAPHLY 313 (433)
T ss_dssp HHHTHHHHHHHHHHHHHTTTCEECCCCS
T ss_pred hhcCCHHHHHHHHHHHHHcCCEEEecCC
Confidence 65432112 7799999999999987764
|
| >3r4e_A Mandelate racemase/muconate lactonizing enzyme; enolase fold, mannonate dehydratase, D-mannonate, lyase; HET: CS2; 1.65A {Novosphingobium aromaticivorans} PDB: 2qjj_A 2qjn_A* 2qjm_A* | Back alignment and structure |
|---|
Probab=88.37 E-value=8.2 Score=34.04 Aligned_cols=155 Identities=8% Similarity=-0.015 Sum_probs=94.9
Q ss_pred CHHHHHHHHHHHHHCCCCEEeCcCC-------cCC---------------C----------cHHHHHHHHHhcCCCCCEE
Q 025500 39 SEEDGISMIKHAFSKGITFFDTADV-------YGQ---------------N----------ANEVLLGKALKQLPREKIQ 86 (252)
Q Consensus 39 ~~~~~~~~l~~A~~~Gin~~Dta~~-------Yg~---------------g----------~se~~ig~~l~~~~R~~~~ 86 (252)
+.++..+..+.+++.|++.|-.--. ||. + .....+=+++++.-..++-
T Consensus 143 ~~e~~~~~a~~~~~~Gf~~~K~k~G~~~~~~~~g~~~~~~~~~~~~~~~p~~~~~~~~~~~~~d~~~v~avR~a~G~d~~ 222 (418)
T 3r4e_A 143 DIAETVEAVGHYIDMGYKAIRAQTGVPGIKDAYGVGRGKLYYEPADASLPSVTGWDTRKALNYVPKLFEELRKTYGFDHH 222 (418)
T ss_dssp SHHHHHHHHHHHHHTTCSEEEEEECCTTC------------------CCCCEEEECHHHHHHHHHHHHHHHHHHHCSSSE
T ss_pred CHHHHHHHHHHHHHcCCCEEEEecCCccccccccccccccccccccccccccccccchhHHHHHHHHHHHHHHHcCCCCe
Confidence 6788889999999999998864211 221 0 0111222445542122344
Q ss_pred EEeccCccCCCCcccccCCChHHHHHHHHHHHHHcCCCcccEEEccCCCCCCCHHHHHHHHHHHHHcCCccEE-EccCCC
Q 025500 87 VATKFGIAGIGVAGVIVKGAPDYVRSCCEASLKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYI-GLSEAS 165 (252)
Q Consensus 87 i~tK~~~~~~~~~~~~~~~~~~~i~~~~~~sL~~Lg~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~G~ir~i-Gvs~~~ 165 (252)
|...... .++.+...+ +-+.|+.++++++ +.|-... .++.+.+++++-.|.-+ |=+-++
T Consensus 223 l~vDaN~----------~~~~~~A~~-~~~~L~~~~i~~i-----EqP~~~~----d~~~~~~l~~~~~iPIa~dE~~~~ 282 (418)
T 3r4e_A 223 LLHDGHH----------RYTPQEAAN-LGKMLEPYQLFWL-----EDCTPAE----NQEAFRLVRQHTVTPLAVGEIFNT 282 (418)
T ss_dssp EEEECTT----------CSCHHHHHH-HHHHHGGGCCSEE-----ESCSCCS----SGGGGHHHHHHCCSCEEECTTCCS
T ss_pred EEEeCCC----------CCCHHHHHH-HHHHHHhhCCCEE-----ECCCCcc----CHHHHHHHHhcCCCCEEEcCCcCC
Confidence 4433321 245554443 3345677766554 4554322 35567777776555433 334477
Q ss_pred HHHHHHHhhcCCceEEeeecCccccchh-hhHHHHHHHhCCeEEecccC
Q 025500 166 PGTIRRAHAVHPITAVQMEWSLWTRDIE-EEIIPLCRELGIGIVPYSPL 213 (252)
Q Consensus 166 ~~~l~~~~~~~~~~~~q~~~~~~~~~~~-~~l~~~~~~~gi~v~a~spl 213 (252)
.+.++++++....+++|+..+..-.-.+ ..+.+.|+++|+.++..+++
T Consensus 283 ~~~~~~~l~~~a~d~v~~k~~~~GGit~~~~ia~~A~~~gi~~~~h~~~ 331 (418)
T 3r4e_A 283 IWDAKDLIQNQLIDYIRATVVGAGGLTHLRRIADLASLYQVRTGCHGPT 331 (418)
T ss_dssp GGGTHHHHHTTCCSEECCCTTTTTHHHHHHHHHHHHHHTTCEEEECCCT
T ss_pred HHHHHHHHHcCCCCeEecCccccCCHHHHHHHHHHHHHcCCEEeecCCC
Confidence 8889999988889999998877543222 77999999999999988875
|
| >3dgb_A Muconate cycloisomerase; muconate lactonizing enzyme, muconolactone binding, isomeras structural genomics, PSI-2; HET: MUC; 1.70A {Pseudomonas fluorescens} PDB: 3ct2_A* 3fj4_A* 1muc_A 1bkh_A 3muc_A 2muc_A 1f9c_A | Back alignment and structure |
|---|
Probab=88.36 E-value=5.9 Score=34.47 Aligned_cols=158 Identities=9% Similarity=-0.010 Sum_probs=91.8
Q ss_pred CHHHHHHHHHHHHH-CCCCEEeCcCCcCCCcHHHHHHHHHhcCCCCCEEEEeccCccCCCCcccccCCChHHHHHHHHHH
Q 025500 39 SEEDGISMIKHAFS-KGITFFDTADVYGQNANEVLLGKALKQLPREKIQVATKFGIAGIGVAGVIVKGAPDYVRSCCEAS 117 (252)
Q Consensus 39 ~~~~~~~~l~~A~~-~Gin~~Dta~~Yg~g~se~~ig~~l~~~~R~~~~i~tK~~~~~~~~~~~~~~~~~~~i~~~~~~s 117 (252)
+.++..+....+++ .|++.|-.--...+-..+...=+++++.-.+++.|....-. .++.+...+ +-+.
T Consensus 148 ~~~~~~~~~~~~~~~~G~~~~KiKvg~~~~~~d~~~v~avR~a~g~~~~l~vDaN~----------~~~~~~A~~-~~~~ 216 (382)
T 3dgb_A 148 DTAKDIAEAQKMLDLRRHRIFKLKIGAGEVDRDLAHVIAIKKALGDSASVRVDVNQ----------AWDEAVALR-ACRI 216 (382)
T ss_dssp CHHHHHHHHHHHHHTTSCSEEEEECCSSCHHHHHHHHHHHHHHHGGGSEEEEECTT----------CBCHHHHHH-HHHH
T ss_pred ChHHHHHHHHHHHHhCCCCEEEEeeCCCCHHHHHHHHHHHHHHcCCCCeEEEeCCC----------CCCHHHHHH-HHHH
Confidence 45555555666677 69998875321111012222234455411233334333321 134443332 3345
Q ss_pred HHHcCCCcccEEEccCCCCCCCHHHHHHHHHHHHHcCCc-cEEEccCCCHHHHHHHhhcCCceEEeeecCccccch-hhh
Q 025500 118 LKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKI-KYIGLSEASPGTIRRAHAVHPITAVQMEWSLWTRDI-EEE 195 (252)
Q Consensus 118 L~~Lg~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~G~i-r~iGvs~~~~~~l~~~~~~~~~~~~q~~~~~~~~~~-~~~ 195 (252)
|+.+++ .++..|-... .++.+.+++++-.+ -..|=+-++...+.++++...++++|+..+..-.-. -..
T Consensus 217 l~~~~i-----~~iEqP~~~~----d~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~~~~~~~d~v~~k~~~~GGit~~~~ 287 (382)
T 3dgb_A 217 LGGNGI-----DLIEQPISRN----NRAGMVRLNASSPAPIMADESIECVEDAFNLAREGAASVFALKIAKNGGPRATLR 287 (382)
T ss_dssp HHTTTC-----CCEECCBCTT----CHHHHHHHHHHCSSCEEESTTCSSHHHHHHHHHHTCCSEEEECHHHHTSHHHHHH
T ss_pred HhhcCc-----CeeeCCCCcc----CHHHHHHHHHhCCCCEEeCCCcCCHHHHHHHHHcCCCCEEEecccccCCHHHHHH
Confidence 555554 4455564322 36777777776444 345556688899999998888999999876543211 277
Q ss_pred HHHHHHHhCCeEEecccCccc
Q 025500 196 IIPLCRELGIGIVPYSPLGRG 216 (252)
Q Consensus 196 l~~~~~~~gi~v~a~spl~~G 216 (252)
+.+.|+++|+.++..+.+.++
T Consensus 288 i~~~A~~~gi~~~~~~~~es~ 308 (382)
T 3dgb_A 288 TAAIAEAAGIGLYGGTMLEGG 308 (382)
T ss_dssp HHHHHHHHTCEEEECCSCCCH
T ss_pred HHHHHHHcCCeEeecCCCccH
Confidence 899999999999987776543
|
| >3ddm_A Putative mandelate racemase/muconate lactonizing enzyme; structural genomics, NYSGXRC, target 9284B, enolase family, PSI-2; 2.60A {Bordetella bronchiseptica} | Back alignment and structure |
|---|
Probab=87.84 E-value=2.3 Score=37.25 Aligned_cols=149 Identities=12% Similarity=0.105 Sum_probs=90.6
Q ss_pred HHHHHHHHHHHHCCCCEEeCcCCcCCCcHHHHHHHHHhc--CCCCCEEEEeccCccCCCCcccccCCChHHHHHHHHHHH
Q 025500 41 EDGISMIKHAFSKGITFFDTADVYGQNANEVLLGKALKQ--LPREKIQVATKFGIAGIGVAGVIVKGAPDYVRSCCEASL 118 (252)
Q Consensus 41 ~~~~~~l~~A~~~Gin~~Dta~~Yg~g~se~~ig~~l~~--~~R~~~~i~tK~~~~~~~~~~~~~~~~~~~i~~~~~~sL 118 (252)
++..+..+.+.+.|++.|..--.... ..+...=+++++ .+.-.+.| .... .++.+...+ +-+.|
T Consensus 157 e~~~~~a~~~~~~G~~~iKlK~g~~~-~~d~~~v~avR~a~g~~~~l~v--DaN~----------~~~~~~A~~-~~~~L 222 (392)
T 3ddm_A 157 ENPEDVVARKAAEGYRAFKLKVGFDD-ARDVRNALHVRELLGAATPLMA--DANQ----------GWDLPRARQ-MAQRL 222 (392)
T ss_dssp SSHHHHHHHHHHHTCCCEEEECSSCH-HHHHHHHHHHHHHHCSSSCEEE--ECTT----------CCCHHHHHH-HHHHH
T ss_pred HHHHHHHHHHHHcCCCEEEEecCCCH-HHHHHHHHHHHHhcCCCceEEE--eCCC----------CCCHHHHHH-HHHHH
Confidence 55667777888899998885432211 122223345555 23334444 3211 234544332 34566
Q ss_pred HHcCCCcccEEEccCCCCCCCHHHHHHHHHHHHHcCCcc-EEEccCCCHHHHHHHhhcCCceEEeeecCccccchh-hhH
Q 025500 119 KRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIK-YIGLSEASPGTIRRAHAVHPITAVQMEWSLWTRDIE-EEI 196 (252)
Q Consensus 119 ~~Lg~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~G~ir-~iGvs~~~~~~l~~~~~~~~~~~~q~~~~~~~~~~~-~~l 196 (252)
+.++++++ ..|-...+ .++.+.+++++-.+. ..|=+-++.+.++++++....+++|+..+-.-.-.+ ..+
T Consensus 223 ~~~~i~~i-----EeP~~~~d---~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~a~d~v~~k~~~~GGit~~~~i 294 (392)
T 3ddm_A 223 GPAQLDWL-----EEPLRADR---PAAEWAELAQAAPMPLAGGENIAGVAAFETALAARSLRVMQPDLAKWGGFSGCLPV 294 (392)
T ss_dssp GGGCCSEE-----ECCSCTTS---CHHHHHHHHHHCSSCEEECTTCCSHHHHHHHHHHTCEEEECCCTTTTTHHHHHHHH
T ss_pred HHhCCCEE-----ECCCCccc---hHHHHHHHHHhcCCCEEeCCCCCCHHHHHHHHHcCCCCEEEeCcchhCCHHHHHHH
Confidence 66666554 45533222 167777887764443 445556889999999888889999998776532212 789
Q ss_pred HHHHHHhCCeEEecc
Q 025500 197 IPLCRELGIGIVPYS 211 (252)
Q Consensus 197 ~~~~~~~gi~v~a~s 211 (252)
.+.|+++|+.++...
T Consensus 295 a~~A~~~gi~~~~h~ 309 (392)
T 3ddm_A 295 ARAVVAAGLRYCPHY 309 (392)
T ss_dssp HHHHHHTTCEECCEE
T ss_pred HHHHHHcCCEEEecC
Confidence 999999999997544
|
| >2akz_A Gamma enolase, neural; fluoride inhibition, negative cooperativity, glycolysis, , isothermal titration calorimetry, lyase; 1.36A {Homo sapiens} SCOP: c.1.11.1 d.54.1.1 PDB: 2akm_A 1te6_A 2psn_A 3b97_A 2xsx_A 1pdz_A 1pdy_A | Back alignment and structure |
|---|
Probab=87.81 E-value=5 Score=35.75 Aligned_cols=96 Identities=14% Similarity=0.093 Sum_probs=72.2
Q ss_pred CChHHHHHHHHHHHHHcCCCcccEEEccCCCCCCCHHHHHHHHHHHHHcCCccEEEccC--CCHHHHHHHhhcCCceEEe
Q 025500 105 GAPDYVRSCCEASLKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSE--ASPGTIRRAHAVHPITAVQ 182 (252)
Q Consensus 105 ~~~~~i~~~~~~sL~~Lg~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~G~ir~iGvs~--~~~~~l~~~~~~~~~~~~q 182 (252)
++++.+.+.+.+.++.+ +++++..|-...+ |+.+.+|.++.+|.-+|=-. .+++.+.++++....+++|
T Consensus 270 ~t~~e~~~~~~~ll~~y-----~i~~IEdPl~~dD----~~g~~~L~~~~~ipI~gDE~~vt~~~~~~~~i~~~a~d~i~ 340 (439)
T 2akz_A 270 ITGDQLGALYQDFVRDY-----PVVSIEDPFDQDD----WAAWSKFTANVGIQIVGDDLTVTNPKRIERAVEEKACNCLL 340 (439)
T ss_dssp BCHHHHHHHHHHHHHHS-----CEEEEECCSCTTC----HHHHHHHHHTCSSEEEESTTTTTCHHHHHHHHHTTCCSEEE
T ss_pred CCHHHHHHHHHHHHHhC-----CCcEEECCCCccc----HHHHHHHHhCCCCEEEeCCCccCCHHHHHHHHHhCCCCEEE
Confidence 46777667777777765 5888998865443 78888888888887665443 3789999999988899999
Q ss_pred eecCccccchh-hhHHHHHHHhCCeEEe
Q 025500 183 MEWSLWTRDIE-EEIIPLCRELGIGIVP 209 (252)
Q Consensus 183 ~~~~~~~~~~~-~~l~~~~~~~gi~v~a 209 (252)
+..|-.-.-.+ .++.+.|+++|+.++.
T Consensus 341 iKv~qiGGitea~~ia~lA~~~g~~~~~ 368 (439)
T 2akz_A 341 LKVNQIGSVTEAIQACKLAQENGWGVMV 368 (439)
T ss_dssp ECHHHHCCHHHHHHHHHHHHHTTCEEEE
T ss_pred echhhcCCHHHHHHHHHHHHHCCCeEEe
Confidence 98765433222 6899999999999765
|
| >3vc5_A Mandelate racemase/muconate lactonizing protein; dehydratase, magnesium binding, enzyme function initiative, enolase, isomerase; 1.50A {Thermobispora bispora} PDB: 3vc6_A 4dhg_A | Back alignment and structure |
|---|
Probab=87.74 E-value=6.8 Score=34.88 Aligned_cols=154 Identities=16% Similarity=0.192 Sum_probs=94.6
Q ss_pred CCHHHHHHHHHHHHHC-CCCEEeCcCCcCCCcHHHHHHHHHhc-CCCCCEEEEeccCccCCCCcccccCCChHHHHHHHH
Q 025500 38 VSEEDGISMIKHAFSK-GITFFDTADVYGQNANEVLLGKALKQ-LPREKIQVATKFGIAGIGVAGVIVKGAPDYVRSCCE 115 (252)
Q Consensus 38 ~~~~~~~~~l~~A~~~-Gin~~Dta~~Yg~g~se~~ig~~l~~-~~R~~~~i~tK~~~~~~~~~~~~~~~~~~~i~~~~~ 115 (252)
.++++..+..+.+++. |++.|=.--...+...+...=+++++ ++.-++.| -.-. .++.+.. .
T Consensus 187 ~~~e~~~~~a~~~~~~~Gf~~~KlKvG~~~~~~Di~rv~avRea~pd~~L~v--DaN~----------~w~~~~A----i 250 (441)
T 3vc5_A 187 LDPDGIVAQARLLIGEYGFRSIKLKGGVFPPEQEAEAIQALRDAFPGLPLRL--DPNA----------AWTVETS----I 250 (441)
T ss_dssp CSHHHHHHHHHHHHHHHCCSSEEEECSSSCHHHHHHHHHHHHHHSTTCCEEE--ECTT----------CSCHHHH----H
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEccCCCCHHHHHHHHHHHHHhCCCCcEec--cCCC----------CCCHHHH----H
Confidence 3678888888888874 99977643211110112222245555 53323333 2111 2344333 2
Q ss_pred HHHHHcCCCcccEEEccCCCCCCCHHHHHHHHHHHHHcCC-ccEEEccCCCHHHHHHHhhcCCceEEeeecCccccch-h
Q 025500 116 ASLKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGK-IKYIGLSEASPGTIRRAHAVHPITAVQMEWSLWTRDI-E 193 (252)
Q Consensus 116 ~sL~~Lg~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~G~-ir~iGvs~~~~~~l~~~~~~~~~~~~q~~~~~~~~~~-~ 193 (252)
+.+++|. + + +.++..|-. .++.+.+++++-. --+.|=|-++...+.++++....+++|+..+..-.-. .
T Consensus 251 ~~~~~L~-~-~-l~~iEeP~~------~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~l~~~a~dii~~d~~~~GGitea 321 (441)
T 3vc5_A 251 RVGRALD-G-V-LEYLEDPTP------GIDGMARVAAEVPMPLATNMCVVTPEHLPAAVERRPIGVLLIDHHYWGGLVRS 321 (441)
T ss_dssp HHHHHTT-T-T-CSEEECCSS------SHHHHHHHHTTSSSCEEESSSCCSGGGHHHHHHHCCCSEEEECHHHHTSHHHH
T ss_pred HHHHHHH-H-H-HHHhhccCC------CHHHHHHHHhcCCCCEEeCCCCCCHHHHHHHHHhCCCCEEeechhhcCCHHHH
Confidence 4455664 2 3 777888842 2567777776533 3355666788888999888888999999766543211 2
Q ss_pred hhHHHHHHHhCCeEEecccCccc
Q 025500 194 EEIIPLCRELGIGIVPYSPLGRG 216 (252)
Q Consensus 194 ~~l~~~~~~~gi~v~a~spl~~G 216 (252)
..+...|+++|+.+...+....|
T Consensus 322 ~kia~lA~~~gv~v~~h~~~e~~ 344 (441)
T 3vc5_A 322 AHIATLCATFGIELSMHSNSHLG 344 (441)
T ss_dssp HHHHHHHHHTTCEEEECCCSCCH
T ss_pred HHHHHHHHHcCCEEEecCCcccH
Confidence 78999999999999988876444
|
| >2ozt_A TLR1174 protein; structural genomics, O-succinylbenzoate synthase, PSI, protein structure initiative; 1.42A {Synechococcus elongatus} PDB: 3h7v_A | Back alignment and structure |
|---|
Probab=87.52 E-value=12 Score=31.69 Aligned_cols=157 Identities=16% Similarity=0.051 Sum_probs=93.9
Q ss_pred CHHHHHHHHHHHHHCCCCEEeCcCCcCCCcHHHHHHHHHhc-CC-CCCEEEEeccCccCCCCcccccCCChHHHHHHHHH
Q 025500 39 SEEDGISMIKHAFSKGITFFDTADVYGQNANEVLLGKALKQ-LP-REKIQVATKFGIAGIGVAGVIVKGAPDYVRSCCEA 116 (252)
Q Consensus 39 ~~~~~~~~l~~A~~~Gin~~Dta~~Yg~g~se~~ig~~l~~-~~-R~~~~i~tK~~~~~~~~~~~~~~~~~~~i~~~~~~ 116 (252)
+.++..+.++.+++.|++.|-.--.-..-..+...=+++++ +. .-++.| -.- ..++++...+-+ +
T Consensus 116 ~~e~~~~~a~~~~~~G~~~~KiKvg~~~~~~d~~~v~avr~~~g~~~~L~v--DaN----------~~~~~~~A~~~~-~ 182 (332)
T 2ozt_A 116 SGQAALEQWQQSWQRGQTTFKWKVGVMSPEEEQAILKALLAALPPGAKLRL--DAN----------GSWDRATANRWF-A 182 (332)
T ss_dssp TGGGHHHHHHHHHHTTCCEEEEECSSSCHHHHHHHHHHHHHHSCTTCEEEE--ECT----------TCCCHHHHHHHH-H
T ss_pred ChHHHHHHHHHHHHcCCcEEEEEeCCCChHHHHHHHHHHHHHcCCCCEEEE--ccc----------CCCCHHHHHHHH-H
Confidence 34556777778888999987643211100111222244454 32 223333 111 124565555444 3
Q ss_pred HHHHcCCCcccEEEccCCCCCCCHHHHHHHHHHHHHcCC-ccEEEccCCCHHHHHHHhhcCCceEEeeecCccccchhhh
Q 025500 117 SLKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGK-IKYIGLSEASPGTIRRAHAVHPITAVQMEWSLWTRDIEEE 195 (252)
Q Consensus 117 sL~~Lg~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~G~-ir~iGvs~~~~~~l~~~~~~~~~~~~q~~~~~~~~~~~~~ 195 (252)
.|+.+. -.++.++..|-...+ ++.+.++.++-. --..|=+-++...+.++++....+++|+..+..-. . ..
T Consensus 183 ~l~~~~--~~~i~~iEqP~~~~d----~~~~~~l~~~~~ipIa~dEs~~~~~~~~~~~~~~a~~~i~ik~~~~GG-i-~~ 254 (332)
T 2ozt_A 183 WLDRHG--NGKIEYVEQPLPPDQ----WQALLSLAQTVTTAIALDESVVSAAEVQRWVDRGWPGFFVIKTALFGD-P-DS 254 (332)
T ss_dssp HHHHHC--CTTEEEEECCSCTTC----HHHHHHHHHHCSSCEEESTTCCSHHHHHHHHHTTCCSEEEECHHHHSC-H-HH
T ss_pred HHHhhc--cCCcceeECCCCCCC----HHHHHHHHHhCCCCEEeCCCCCCHHHHHHHHHhCCCCEEEEChhhhCC-H-HH
Confidence 355552 137889998865433 566666666533 34555566888999999887778888887665422 1 47
Q ss_pred HHHHHHHh--CCeEEecccCccc
Q 025500 196 IIPLCREL--GIGIVPYSPLGRG 216 (252)
Q Consensus 196 l~~~~~~~--gi~v~a~spl~~G 216 (252)
+.+.|+++ |+.++..+.+..+
T Consensus 255 i~~~A~~~~~gi~~~~~~~~es~ 277 (332)
T 2ozt_A 255 LSLLLRRGLEPQRLVFSSALEGA 277 (332)
T ss_dssp HHHHHHTTCCGGGEEEBCCSCCH
T ss_pred HHHHHHHhCCCCcEEEeCCcchH
Confidence 88999999 9999988776544
|
| >4e4u_A Mandalate racemase/muconate lactonizing enzyme; mandelate racemase, aldolase, structural genomics, biology; 1.35A {Unidentified} | Back alignment and structure |
|---|
Probab=87.49 E-value=14 Score=32.40 Aligned_cols=153 Identities=10% Similarity=0.037 Sum_probs=94.1
Q ss_pred CHHHHHHHHHHHHHCCCCEEeCcCC--cC--CC--------cHHHHHHHHHhcCCCCCEEEEeccCccCCCCcccccCCC
Q 025500 39 SEEDGISMIKHAFSKGITFFDTADV--YG--QN--------ANEVLLGKALKQLPREKIQVATKFGIAGIGVAGVIVKGA 106 (252)
Q Consensus 39 ~~~~~~~~l~~A~~~Gin~~Dta~~--Yg--~g--------~se~~ig~~l~~~~R~~~~i~tK~~~~~~~~~~~~~~~~ 106 (252)
+.++..+..+.+++.|++.|-.-.. |. .| ......=+++++.-..++-|...... .++
T Consensus 144 ~~e~~~~~a~~~~~~G~~~iKlK~g~~~~~~~g~~~~~~~~~~d~~~v~avR~a~G~d~~l~vDaN~----------~~~ 213 (412)
T 4e4u_A 144 DPDLAAECAAENVKLGFTAVKFDPAGPYTAYSGHQLSLEVLDRCELFCRRVREAVGSKADLLFGTHG----------QMV 213 (412)
T ss_dssp CHHHHHHHHHHHHHHTCSEEEECCSCCCBTTCCBCCCHHHHHHHHHHHHHHHHHHTTSSEEEECCCS----------CBC
T ss_pred CHHHHHHHHHHHHHcCCCEEEECCCCCCccccccccchhhHHHHHHHHHHHHHHhCCCCeEEEECCC----------CCC
Confidence 6788888889999999999886421 11 00 01111224444422234444444321 234
Q ss_pred hHHHHHHHHHHHHHcCCCcccEEEccCCCCCCCHHHHHHHHHHHHHcCCccEE-EccCCCHHHHHHHhhcCCceEEeeec
Q 025500 107 PDYVRSCCEASLKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYI-GLSEASPGTIRRAHAVHPITAVQMEW 185 (252)
Q Consensus 107 ~~~i~~~~~~sL~~Lg~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~G~ir~i-Gvs~~~~~~l~~~~~~~~~~~~q~~~ 185 (252)
.+...+ +-+.|+.+++++ ++.|-... .++.+.+++++-.|.-. |=+-++.+.++++++....+++|+..
T Consensus 214 ~~~A~~-~~~~L~~~~i~~-----iEeP~~~~----d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~a~d~v~~d~ 283 (412)
T 4e4u_A 214 PSSAIR-LAKRLEKYDPLW-----FEEPVPPG----QEEAIAQVAKHTSIPIATGERLTTKYEFHKLLQAGGASILQLNV 283 (412)
T ss_dssp HHHHHH-HHHHHGGGCCSE-----EECCSCSS----CHHHHHHHHHTCSSCEEECTTCCHHHHHHHHHHTTCCSEECCCT
T ss_pred HHHHHH-HHHHhhhcCCcE-----EECCCChh----hHHHHHHHHhhCCCCEEecCccCCHHHHHHHHHcCCCCEEEeCc
Confidence 544432 334567766554 44554332 36778888887555433 34446778899999888899999988
Q ss_pred Cccccchh-hhHHHHHHHhCCeEEecc
Q 025500 186 SLWTRDIE-EEIIPLCRELGIGIVPYS 211 (252)
Q Consensus 186 ~~~~~~~~-~~l~~~~~~~gi~v~a~s 211 (252)
+-.-.-.+ ..+.+.|+++|+.+....
T Consensus 284 ~~~GGit~~~kia~~A~~~gi~v~~h~ 310 (412)
T 4e4u_A 284 ARVGGLLEAKKIATLAEVHYAQIAPHL 310 (412)
T ss_dssp TTTTSHHHHHHHHHHHHHTTCEECCCC
T ss_pred cccCCHHHHHHHHHHHHHcCCEEEecC
Confidence 77543222 779999999999987664
|
| >3qtp_A Enolase 1; glycolysis, lyase; HET: 2PG; 1.90A {Entamoeba histolytica} | Back alignment and structure |
|---|
Probab=87.38 E-value=8.1 Score=34.43 Aligned_cols=97 Identities=13% Similarity=0.063 Sum_probs=70.9
Q ss_pred CChHHHHHHHHHHHHHcCCCcccEEEccCCCCCCCHHHHHHHHHHHHHcC-CccEEEc--cCCCHHHHHHHhhcCCceEE
Q 025500 105 GAPDYVRSCCEASLKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEG-KIKYIGL--SEASPGTIRRAHAVHPITAV 181 (252)
Q Consensus 105 ~~~~~i~~~~~~sL~~Lg~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~G-~ir~iGv--s~~~~~~l~~~~~~~~~~~~ 181 (252)
.+++.+.+-+.+.++.. +++++..|-...+ |+.+.+|.++- +|.-+|= ...+++.++++++....+++
T Consensus 279 ~t~~elid~y~~lle~y-----pI~~IEDPl~~dD----~eg~a~Lt~~lg~i~IvGDEl~vTn~~~i~~~Ie~~a~n~I 349 (441)
T 3qtp_A 279 KDVDGLIAEYVDYGKHY-----PIASIEDPFAEDD----WAAWNKFTVEHGNFQIVGDDLLVTNPARVQMAMDKNACNSV 349 (441)
T ss_dssp ECHHHHHHHHHHHHHHS-----CEEEEESCSCTTC----HHHHHHHHHHTTTSEEEESTTTTTCHHHHHHHHHHTCCSEE
T ss_pred cCHHHHHHHHHHHhhhc-----ceeeecCCCChHH----HHHHHHHHHhcCCceEEeccccccCHHHHHHHHHcCCCCEE
Confidence 57888888888888865 4889988876554 55555555553 5766662 33478999999988889999
Q ss_pred eeecCccccchh-hhHHHHHHHhCCeEEec
Q 025500 182 QMEWSLWTRDIE-EEIIPLCRELGIGIVPY 210 (252)
Q Consensus 182 q~~~~~~~~~~~-~~l~~~~~~~gi~v~a~ 210 (252)
|+..|-.-.-.+ .++...|+++|+.++..
T Consensus 350 lIKvnqiGGITEalkaa~lA~~~G~~vmvs 379 (441)
T 3qtp_A 350 LIKVNQIGTLTETFKTIKMAQEKGWGVMAS 379 (441)
T ss_dssp EECGGGTCCHHHHHHHHHHHHHTTCEEEEE
T ss_pred EecccccccHHHHHHHHHHHHHcCCeEEEe
Confidence 998875543222 67889999999998753
|
| >3vdg_A Probable glucarate dehydratase; enolase, magnesium binding site, lyase; 1.90A {Mycobacterium smegmatis str} PDB: 3vfc_A* | Back alignment and structure |
|---|
Probab=87.36 E-value=8 Score=34.50 Aligned_cols=154 Identities=12% Similarity=0.187 Sum_probs=94.4
Q ss_pred CCHHHHHHHHHHHHHC-CCCEEeCcCCcCCCcHHHHHHHHHhc-CCCCCEEEEeccCccCCCCcccccCCChHHHHHHHH
Q 025500 38 VSEEDGISMIKHAFSK-GITFFDTADVYGQNANEVLLGKALKQ-LPREKIQVATKFGIAGIGVAGVIVKGAPDYVRSCCE 115 (252)
Q Consensus 38 ~~~~~~~~~l~~A~~~-Gin~~Dta~~Yg~g~se~~ig~~l~~-~~R~~~~i~tK~~~~~~~~~~~~~~~~~~~i~~~~~ 115 (252)
.++++..+..+.+++. |++.|=.--...+...+...=+++++ ++.-++.| -.- ..++.+.. .
T Consensus 192 ~~~e~~~~~a~~~~~~~Gf~~~KlKvG~~~~~~Di~~v~avRea~~d~~L~v--DaN----------~~w~~~~A----i 255 (445)
T 3vdg_A 192 LDPDGIVAQARRMIDEYGFSAIKLKGGVFAPEEEMAAVEALRAAFPDHPLRL--DPN----------AAWTPQTS----V 255 (445)
T ss_dssp CSHHHHHHHHHHHHHHHCCSSEEEECSSSCHHHHHHHHHHHHHHCTTSCEEE--ECT----------TCSCHHHH----H
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEECCCCCCHHHHHHHHHHHHHhCCCCcEEE--ECC----------CCCCHHHH----H
Confidence 3678888888888875 99977643211110112222245555 42223333 211 12344332 2
Q ss_pred HHHHHcCCCcccEEEccCCCCCCCHHHHHHHHHHHHHcCCc-cEEEccCCCHHHHHHHhhcCCceEEeeecCccccch-h
Q 025500 116 ASLKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKI-KYIGLSEASPGTIRRAHAVHPITAVQMEWSLWTRDI-E 193 (252)
Q Consensus 116 ~sL~~Lg~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~G~i-r~iGvs~~~~~~l~~~~~~~~~~~~q~~~~~~~~~~-~ 193 (252)
+.+++|. .+ +.++..|-. .++.+.+++++-.| -+.|=+-++...+.++++....+++|+..+..-.-. .
T Consensus 256 ~~~~~L~--~~-l~~iEeP~~------~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~l~~~a~div~~d~~~~GGitea 326 (445)
T 3vdg_A 256 KVAAGLE--GV-LEYLEDPTP------GLDGMAEVAAQAPMPLATNMCVVAFDQLPAAVAKNSVQVVLSDHHYWGGLQRS 326 (445)
T ss_dssp HHHHHTT--TT-CSEEECCSS------SHHHHHHHHHHCSSCEEESSSCCSGGGHHHHHHHTCCSEEEECHHHHTSHHHH
T ss_pred HHHHHHh--hH-HHeeeCCCC------CHHHHHHHHhcCCCCEEcCCcCCCHHHHHHHHHcCCCCEEeeCcceeCCHHHH
Confidence 3455554 23 777888742 25677777776433 355666688888999988888999999876543211 2
Q ss_pred hhHHHHHHHhCCeEEecccCccc
Q 025500 194 EEIIPLCRELGIGIVPYSPLGRG 216 (252)
Q Consensus 194 ~~l~~~~~~~gi~v~a~spl~~G 216 (252)
..+...|+++|+.+...+....|
T Consensus 327 ~kia~lA~~~gv~v~~h~~~e~~ 349 (445)
T 3vdg_A 327 RLLAGICDTFGLGLSMHSNSHLG 349 (445)
T ss_dssp HHHHHHHHHHTCEEEECCCSCCH
T ss_pred HHHHHHHHHcCCEEEEeCCcchH
Confidence 68999999999999988876444
|
| >3sbf_A Mandelate racemase / muconate lactonizing enzyme; enolase fold, acid sugar dehydratase, D-araninonate, isomera; HET: EPE D8T; 1.50A {Vibrionales bacterium swat-3} PDB: 3r25_A 3dfh_A 4gis_A 4gir_A 4ggh_A 3gy1_A | Back alignment and structure |
|---|
Probab=87.36 E-value=14 Score=32.23 Aligned_cols=155 Identities=12% Similarity=0.141 Sum_probs=95.3
Q ss_pred CHHHHHHHHHHHHHCCCCEEeCcC-CcC-------------CC---------cHHHHHHHHHhcCCCCCEEEEeccCccC
Q 025500 39 SEEDGISMIKHAFSKGITFFDTAD-VYG-------------QN---------ANEVLLGKALKQLPREKIQVATKFGIAG 95 (252)
Q Consensus 39 ~~~~~~~~l~~A~~~Gin~~Dta~-~Yg-------------~g---------~se~~ig~~l~~~~R~~~~i~tK~~~~~ 95 (252)
+.++..+..+.+++.|++.|-.-- .++ +| +.+..+=+++++.--.++-|......
T Consensus 133 ~~e~~~~~a~~~~~~G~~~~K~KvG~~~~~~~~~~~~~~~~~g~~~~~~~~~~~d~~~v~avR~a~G~d~~l~vDan~-- 210 (401)
T 3sbf_A 133 TMEGIYDLVEGFLEKGYKHIRCQLGFYGGVPTDLHTTQNPTEGSYYDQDQYMDNTLTMFKSLREKYGNQFHILHDVHE-- 210 (401)
T ss_dssp SHHHHHHHHHHHHHTTCCEEEEEESCCCSCGGGSCCCSSCCSSEECCHHHHHHHHHHHHHHHHHHHTTSSEEEEECTT--
T ss_pred CHHHHHHHHHHHHHcCCCEEEEeeccCCcccccccccccccccccccchHHHHHHHHHHHHHHHHcCCCCEEEEECCC--
Confidence 678888999999999999887421 111 01 01112224455411233444444321
Q ss_pred CCCcccccCCChHHHHHHHHHHHHHcCCCcccEEEccCCCCCCCHHHHHHHHHHHHHcCCcc-EEEccCCCHHHHHHHhh
Q 025500 96 IGVAGVIVKGAPDYVRSCCEASLKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIK-YIGLSEASPGTIRRAHA 174 (252)
Q Consensus 96 ~~~~~~~~~~~~~~i~~~~~~sL~~Lg~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~G~ir-~iGvs~~~~~~l~~~~~ 174 (252)
.++.+...+ +-+.|+.++++++ +.|-... .++.+.+++++-.|. ..|=+-++.+.++++++
T Consensus 211 --------~~~~~~A~~-~~~~L~~~~i~~i-----EqP~~~~----~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~ 272 (401)
T 3sbf_A 211 --------RLFPNQAIQ-FAKEVEQYKPYFI-----EDILPPN----QTEWLDNIRSQSSVSLGLGELFNNPEEWKSLIA 272 (401)
T ss_dssp --------CSCHHHHHH-HHHHHGGGCCSCE-----ECSSCTT----CGGGHHHHHTTCCCCEEECTTCCSHHHHHHHHH
T ss_pred --------CCCHHHHHH-HHHHHHhcCCCEE-----ECCCChh----HHHHHHHHHhhCCCCEEeCCccCCHHHHHHHHh
Confidence 245544433 3345677776554 4553322 356677777765454 33445578899999998
Q ss_pred cCCceEEeeecCccccchh-hhHHHHHHHhCCeEEecccC
Q 025500 175 VHPITAVQMEWSLWTRDIE-EEIIPLCRELGIGIVPYSPL 213 (252)
Q Consensus 175 ~~~~~~~q~~~~~~~~~~~-~~l~~~~~~~gi~v~a~spl 213 (252)
....+++|+..+..-.-.+ ..+.+.|+++|+.++..++.
T Consensus 273 ~~~~d~v~~k~~~~GGit~~~kia~~A~~~gi~~~~h~~~ 312 (401)
T 3sbf_A 273 NRRIDFIRCHVSQIGGITPALKLGHLCQNFGVRIAWHCAP 312 (401)
T ss_dssp TTCCSEECCCGGGGTSHHHHHHHHHHHHHHTCEECCCCCT
T ss_pred cCCCCEEecCccccCCHHHHHHHHHHHHHcCCEEEecCCc
Confidence 8889999998876543222 77999999999999887773
|
| >3t6c_A RSPA, putative MAND family dehydratase; enolase, mannonate dehydratase related protein, enzyme funct intitiative, lyase, hydro-lyases; HET: GCO; 1.60A {Pantoea ananatis} PDB: 3tw9_A 3twa_A 3twb_A* | Back alignment and structure |
|---|
Probab=86.91 E-value=9.3 Score=33.97 Aligned_cols=154 Identities=12% Similarity=0.042 Sum_probs=93.5
Q ss_pred CHHHHHHHHHHHHHCCCCEEeCcC-CcC------------------------------CC---------cHHHHHHHHHh
Q 025500 39 SEEDGISMIKHAFSKGITFFDTAD-VYG------------------------------QN---------ANEVLLGKALK 78 (252)
Q Consensus 39 ~~~~~~~~l~~A~~~Gin~~Dta~-~Yg------------------------------~g---------~se~~ig~~l~ 78 (252)
+.++..+..+.+++.|++.|=.-- .++ +| ......=++++
T Consensus 155 ~~e~~~~~a~~~~~~Gf~~~K~KvG~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~v~avR 234 (440)
T 3t6c_A 155 DEVEVEDSARAKMEEGYQYIRCQMGMYGGAGTDDLRLIANRMVKAKNIQPKRSPRTKAPGIYFDPEAYAKSIPRLFDHLR 234 (440)
T ss_dssp SHHHHHHHHHHHHHTTCSEEEECSSSSTTCCBCCHHHHSSCBCCCSSCCCCCCCSSCCSSEECCHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEEeeccCCccccccccccccccccccccccccccccccccccccchhhHHHHHHHHHHHH
Confidence 678888889999999999876421 111 00 01111224455
Q ss_pred cCCCCCEEEEeccCccCCCCcccccCCChHHHHHHHHHHHHHcCCCcccEEEccCCCCCCCHHHHHHHHHHHHHcCCcc-
Q 025500 79 QLPREKIQVATKFGIAGIGVAGVIVKGAPDYVRSCCEASLKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIK- 157 (252)
Q Consensus 79 ~~~R~~~~i~tK~~~~~~~~~~~~~~~~~~~i~~~~~~sL~~Lg~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~G~ir- 157 (252)
+.-..++-|...... .++.+...+ +-+.|+.++++ ++..|-.. +.++.+.+++++-.|.
T Consensus 235 ~a~G~d~~L~vDaN~----------~~~~~~A~~-~~~~L~~~~i~-----~iEeP~~~----~d~~~~~~l~~~~~iPI 294 (440)
T 3t6c_A 235 NKLGFSVELLHDAHE----------RITPINAIH-MAKALEPYQLF-----FLEDPVAP----ENTEWLKMLRQQSSTPI 294 (440)
T ss_dssp HHHCSSSEEEEECTT----------CSCHHHHHH-HHHHTGGGCCS-----EEECSSCG----GGGGGHHHHHHHCCSCE
T ss_pred HhcCCCCeEEEECCC----------CCCHHHHHH-HHHHhhhcCCC-----EEECCCCh----hhHHHHHHHHhhcCCCE
Confidence 422234444444432 134444332 22345555544 44555332 2366677777764443
Q ss_pred EEEccCCCHHHHHHHhhcCCceEEeeecCccccchh-hhHHHHHHHhCCeEEeccc
Q 025500 158 YIGLSEASPGTIRRAHAVHPITAVQMEWSLWTRDIE-EEIIPLCRELGIGIVPYSP 212 (252)
Q Consensus 158 ~iGvs~~~~~~l~~~~~~~~~~~~q~~~~~~~~~~~-~~l~~~~~~~gi~v~a~sp 212 (252)
..|=+-++.+.+.++++....+++|+..+..-.-.+ ..+.+.|+++|+.++..+.
T Consensus 295 a~dE~~~~~~~~~~~i~~~a~d~v~~k~~~~GGit~~~~ia~~A~~~gi~~~~h~~ 350 (440)
T 3t6c_A 295 AMGELFVNVNEWKPLIDNKLIDYIRCHISSIGGITPAKKIAIYSELNGVRTAWHSP 350 (440)
T ss_dssp EECTTCCSHHHHHHHHHTTCCSEECCCGGGGTSHHHHHHHHHHHHHTTCEECCCCS
T ss_pred EeCcccCCHHHHHHHHHcCCccceeechhhhCCHHHHHHHHHHHHHcCCEEEeccC
Confidence 445566889999999988889999998876543222 7799999999999987766
|
| >3mkc_A Racemase; metabolic process, PSI2, NYSGXRC, structu genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; 1.77A {Pseudovibrio SP} PDB: 3nzg_A | Back alignment and structure |
|---|
Probab=86.82 E-value=15 Score=31.99 Aligned_cols=151 Identities=9% Similarity=0.040 Sum_probs=89.7
Q ss_pred HHHHHHHHHHHCCCCEEeC-cCCc--CCCcHHHHHHHHHhcCCCCCEEEEeccCccCCCCcccccCC-ChHHHHHHHHHH
Q 025500 42 DGISMIKHAFSKGITFFDT-ADVY--GQNANEVLLGKALKQLPREKIQVATKFGIAGIGVAGVIVKG-APDYVRSCCEAS 117 (252)
Q Consensus 42 ~~~~~l~~A~~~Gin~~Dt-a~~Y--g~g~se~~ig~~l~~~~R~~~~i~tK~~~~~~~~~~~~~~~-~~~~i~~~~~~s 117 (252)
+..+..+.+.+.|++.|=. --.. .+-.....+=+++++.-..++.|...... .+ +.+...+ +-+.
T Consensus 160 ~~~~~a~~~~~~G~~~~K~~k~g~~~~~~~~d~e~v~avR~a~G~d~~l~vDaN~----------~~~~~~~A~~-~~~~ 228 (394)
T 3mkc_A 160 GYAPLLEKAKAHNIRAVKVCVPIKADWSTKEVAYYLRELRGILGHDTDMMVDYLY----------RFTDWYEVAR-LLNS 228 (394)
T ss_dssp HHHHHHHHHHHTTCSEEEEECCTTCCCCHHHHHHHHHHHHHHHCSSSEEEEECTT----------CCCCHHHHHH-HHHH
T ss_pred HHHHHHHHHHHcCCCEEEeCccCCCccCHHHHHHHHHHHHHHhCCCCeEEEeCCC----------CCCCHHHHHH-HHHH
Confidence 5556788889999998876 2111 11012222334555421123333333211 24 4444443 3334
Q ss_pred HHHcCCCcccEEEccCCCCCCCHHHHHHHHHHHHHcCCccE-EEccCCCHHHHHHHhhcCCceEEeeecCccccchh-hh
Q 025500 118 LKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKY-IGLSEASPGTIRRAHAVHPITAVQMEWSLWTRDIE-EE 195 (252)
Q Consensus 118 L~~Lg~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~G~ir~-iGvs~~~~~~l~~~~~~~~~~~~q~~~~~~~~~~~-~~ 195 (252)
|+.+++++ ++.|-... .++.+.+++++-.+.- .|=+-++.+.++++++....+++|+..+-.-.-.+ ..
T Consensus 229 L~~~~i~~-----iEeP~~~~----d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~l~~~~~d~v~~k~~~~GGit~~~~ 299 (394)
T 3mkc_A 229 IEDLELYF-----AEATLQHD----DLSGHAKLVENTRSRICGAEMSTTRFEAEEWITKGKVHLLQSDYNRCGGLTELRR 299 (394)
T ss_dssp TGGGCCSE-----EESCSCTT----CHHHHHHHHHHCSSCBEECTTCCHHHHHHHHHHTTCCSEECCCTTTTTHHHHHHH
T ss_pred hhhcCCeE-----EECCCCch----hHHHHHHHHhhCCCCEEeCCCCCCHHHHHHHHHcCCCCeEecCccccCCHHHHHH
Confidence 56666544 45664332 3567788887655543 34445778889999988889999998877543222 77
Q ss_pred HHHHHHHhCCeEEeccc
Q 025500 196 IIPLCRELGIGIVPYSP 212 (252)
Q Consensus 196 l~~~~~~~gi~v~a~sp 212 (252)
+.+.|+++|+.++..+.
T Consensus 300 ia~~A~~~gi~~~~h~~ 316 (394)
T 3mkc_A 300 ITEMATANNVQVMPHNW 316 (394)
T ss_dssp HHHHHHHTTCEECCCCC
T ss_pred HHHHHHHcCCEEeecCC
Confidence 99999999999987764
|
| >1ydn_A Hydroxymethylglutaryl-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative; 2.30A {Brucella melitensis} | Back alignment and structure |
|---|
Probab=86.58 E-value=1.7 Score=36.38 Aligned_cols=106 Identities=11% Similarity=-0.004 Sum_probs=66.6
Q ss_pred CChHHHHHHHHHHHHHcCCCcccEEEccCCCCCCCHHHHHHHHHHHHHcCCccEEEccCCCHHHHHHHhhcCCceEEeee
Q 025500 105 GAPDYVRSCCEASLKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPGTIRRAHAVHPITAVQME 184 (252)
Q Consensus 105 ~~~~~i~~~~~~sL~~Lg~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~G~ir~iGvs~~~~~~l~~~~~~~~~~~~q~~ 184 (252)
++.+. +..+-+.|.++|+++|.+-....+.......+.++.++.+.+...++...+. .+.+.++++.+. .++.+.+.
T Consensus 23 ~~~e~-k~~i~~~L~~~Gv~~IE~g~~~~~~~~p~~~~~~e~~~~i~~~~~~~v~~l~-~n~~~i~~a~~~-G~~~V~i~ 99 (295)
T 1ydn_A 23 VPTAD-KIALINRLSDCGYARIEATSFVSPKWVPQLADSREVMAGIRRADGVRYSVLV-PNMKGYEAAAAA-HADEIAVF 99 (295)
T ss_dssp CCHHH-HHHHHHHHTTTTCSEEEEEECSCTTTCGGGTTHHHHHHHSCCCSSSEEEEEC-SSHHHHHHHHHT-TCSEEEEE
T ss_pred cCHHH-HHHHHHHHHHcCcCEEEEccCcCccccccccCHHHHHHHHHhCCCCEEEEEe-CCHHHHHHHHHC-CCCEEEEE
Confidence 44544 4456667789999999998765544222233567777777666567766665 567788888774 34455554
Q ss_pred cCcc--------ccc------hhhhHHHHHHHhCCeEEecccC
Q 025500 185 WSLW--------TRD------IEEEIIPLCRELGIGIVPYSPL 213 (252)
Q Consensus 185 ~~~~--------~~~------~~~~l~~~~~~~gi~v~a~spl 213 (252)
.... ... ...+.+++|+++|+.|.++-..
T Consensus 100 ~~~S~~h~~~~~~~~~~e~~~~~~~~v~~a~~~G~~V~~~l~~ 142 (295)
T 1ydn_A 100 ISASEGFSKANINCTIAESIERLSPVIGAAINDGLAIRGYVSC 142 (295)
T ss_dssp EESCHHHHHHHTSSCHHHHHHHHHHHHHHHHHTTCEEEEEEEC
T ss_pred EecCHHHHHHHcCCCHHHHHHHHHHHHHHHHHcCCeEEEEEEE
Confidence 3221 111 1156799999999999754433
|
| >4hnl_A Mandelate racemase/muconate lactonizing enzyme; dehydratase, magnesium binding, enzyme function initiative,; 1.48A {Enterococcus gallinarum EG2} PDB: 3s47_A | Back alignment and structure |
|---|
Probab=86.48 E-value=6.7 Score=34.57 Aligned_cols=156 Identities=12% Similarity=0.108 Sum_probs=94.4
Q ss_pred CHHHHHHHHHHHHHCCCCEEeCcCCc-CC----------------CcHHHHH------HHHHhcCCCCCEEEEeccCccC
Q 025500 39 SEEDGISMIKHAFSKGITFFDTADVY-GQ----------------NANEVLL------GKALKQLPREKIQVATKFGIAG 95 (252)
Q Consensus 39 ~~~~~~~~l~~A~~~Gin~~Dta~~Y-g~----------------g~se~~i------g~~l~~~~R~~~~i~tK~~~~~ 95 (252)
+.++..+..+.+.+.|++.|=.--.. +. ....+.+ =+++++.--+++.|..-...
T Consensus 153 ~~~~~~~~a~~~~~~G~~~~K~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~v~avR~a~G~~~~l~vDan~-- 230 (421)
T 4hnl_A 153 NLDDLYHEIDRFLAAGYRYIRCQLGFYGGNPSQLQTPEEPISGSYFDQTDYMETTLKMFAAIKEKYGNQFQMLHDVHE-- 230 (421)
T ss_dssp SHHHHHHHHHHHHHTTCSEEEEEESCCCCCGGGSCCCSSCCSSEECCHHHHHHHHHHHHHHHHHHHTTSSEEEEECTT--
T ss_pred CHHHHHHHHHHHHHhhHHHHhhccccccCCchhccccccccccccccchhHHHHHHHHHHHHHHHhCCCceEeccccc--
Confidence 57888888999999999987542211 00 0011111 12333312233334333221
Q ss_pred CCCcccccCCChHHHHHHHHHHHHHcCCCcccEEEccCCCCCCCHHHHHHHHHHHHHcCCcc-EEEccCCCHHHHHHHhh
Q 025500 96 IGVAGVIVKGAPDYVRSCCEASLKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIK-YIGLSEASPGTIRRAHA 174 (252)
Q Consensus 96 ~~~~~~~~~~~~~~i~~~~~~sL~~Lg~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~G~ir-~iGvs~~~~~~l~~~~~ 174 (252)
.++.+...+- -+.|+. .+++++..|-.. +-++.+.+|+++-.+. ..|=+-++...+.++++
T Consensus 231 --------~~~~~~A~~~-~~~l~~-----~~i~~iEeP~~~----~d~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~i~ 292 (421)
T 4hnl_A 231 --------RLHPNQAIQF-AKAAEP-----YQLFFLEDILPP----DQSHWLTQLRSQSATPIATGELFNNPMEWQELVK 292 (421)
T ss_dssp --------CSCHHHHHHH-HHHHGG-----GCCSEEECCSCG----GGGGGHHHHHTTCCCCEEECTTCCSGGGTHHHHH
T ss_pred --------cCCHHHHHHH-HHHhhh-----hhhcccccCCcc----cchHHHHHHHhcCCCCeecCcceehhHHHHHHHh
Confidence 2345444432 233444 456667776443 3467778887764443 45566688888999998
Q ss_pred cCCceEEeeecCccccchh-hhHHHHHHHhCCeEEecccCc
Q 025500 175 VHPITAVQMEWSLWTRDIE-EEIIPLCRELGIGIVPYSPLG 214 (252)
Q Consensus 175 ~~~~~~~q~~~~~~~~~~~-~~l~~~~~~~gi~v~a~spl~ 214 (252)
....+++|+..+-.-.-.+ ..+.+.|+++|+.+...++..
T Consensus 293 ~~a~d~v~~d~~~~GGite~~~ia~~A~~~gi~v~~h~~~~ 333 (421)
T 4hnl_A 293 NRQIDFMRAHVSQIGGITPALKLAHFCDAMGVRIAWHTPSD 333 (421)
T ss_dssp TTCCSEECCCGGGGTSHHHHHHHHHHHHHTTCEECCCCCSS
T ss_pred cCCceEEEeCCCCCCCHHHHHHHHHHHHHCCCeEEEeCCcc
Confidence 8889999998876543222 789999999999998776653
|
| >3v3w_A Starvation sensing protein RSPA; enolase, enzyme function initiative, EFI, lyase; HET: NHE; 1.40A {Cellvibrio japonicus} PDB: 3v4b_A* 4f4r_A 3qkf_A* 3qke_A* 3p93_A* 3ow1_A 3pk7_A* 3rgt_A* 3bsm_A | Back alignment and structure |
|---|
Probab=85.85 E-value=18 Score=31.90 Aligned_cols=155 Identities=10% Similarity=0.003 Sum_probs=94.3
Q ss_pred CHHHHHHHHHHHHHCCCCEEeCcC-------CcCC---------------C----------cHHHHHHHHHhcCCCCCEE
Q 025500 39 SEEDGISMIKHAFSKGITFFDTAD-------VYGQ---------------N----------ANEVLLGKALKQLPREKIQ 86 (252)
Q Consensus 39 ~~~~~~~~l~~A~~~Gin~~Dta~-------~Yg~---------------g----------~se~~ig~~l~~~~R~~~~ 86 (252)
+.++..+..+.+++.|++.|=.-- .||. + .....+=+++++.-..++-
T Consensus 149 ~~e~~~~~a~~~~~~Gf~~iKlKvG~~~~~~~~g~~~~~~~~~~~~~~~p~~~~~d~~~~~~~d~e~v~avR~avG~d~~ 228 (424)
T 3v3w_A 149 DLDSTLEAVRKAKDKGYKAIRVQCGIPGIAKTYGVSTNTKSYEPADADLPSVEVWSTEKYLNYIPDVFAAVRKEFGPDIH 228 (424)
T ss_dssp SHHHHHHHHHHHHHTTCSEEEEEECCTTCSCCTTCC-----CCSCCBSSCCEEEECHHHHHHHHHHHHHHHHHHHCSSSE
T ss_pred CHHHHHHHHHHHHHcCCCEEEEeccCccccccccccccccccccccccccccccccchhHHHHHHHHHHHHHHHcCCCCc
Confidence 678888889999999999764311 1211 1 0111222445542112333
Q ss_pred EEeccCccCCCCcccccCCChHHHHHHHHHHHHHcCCCcccEEEccCCCCCCCHHHHHHHHHHHHHcCCccE-EEccCCC
Q 025500 87 VATKFGIAGIGVAGVIVKGAPDYVRSCCEASLKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKY-IGLSEAS 165 (252)
Q Consensus 87 i~tK~~~~~~~~~~~~~~~~~~~i~~~~~~sL~~Lg~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~G~ir~-iGvs~~~ 165 (252)
|...... .++.+...+ +-+.|+.++++++ +.|-... .++.+.+++++-.|.- .|=+-++
T Consensus 229 l~vDaN~----------~~~~~~A~~-~~~~L~~~~i~~i-----EqP~~~~----d~~~~~~l~~~~~iPIa~dE~~~~ 288 (424)
T 3v3w_A 229 LLHDVHH----------RLTPIEAAR-LGKALEPYHLFWM-----EDAVPAE----NQESFKLIRQHTTTPLAVGEVFNS 288 (424)
T ss_dssp EEEECTT----------CCCHHHHHH-HHHHHGGGCCSEE-----ECCSCCS----STTHHHHHHHHCCSCEEECTTCCS
T ss_pred EEEeCCC----------CCCHHHHHH-HHHHHHhcCCCEE-----ECCCChH----hHHHHHHHHhhCCCCEEEccCcCC
Confidence 4333221 245554443 3345677766554 4554322 2556777777655543 3444577
Q ss_pred HHHHHHHhhcCCceEEeeecCccccchh-hhHHHHHHHhCCeEEecccC
Q 025500 166 PGTIRRAHAVHPITAVQMEWSLWTRDIE-EEIIPLCRELGIGIVPYSPL 213 (252)
Q Consensus 166 ~~~l~~~~~~~~~~~~q~~~~~~~~~~~-~~l~~~~~~~gi~v~a~spl 213 (252)
.+.++++++....+++|+..+..-.-.+ ..+.+.|+++|+.++..+++
T Consensus 289 ~~~~~~~i~~ga~d~v~~k~~~~GGit~~~~ia~~A~~~gi~~~~h~~~ 337 (424)
T 3v3w_A 289 IHDCRELIQNQWIDYIRTTIVHAGGISQMRRIADFASLFHVRTGFHGAT 337 (424)
T ss_dssp GGGTHHHHHTTCCSEECCCTTTTTHHHHHHHHHHHHHTTTCEEEECCCT
T ss_pred HHHHHHHHHcCCCCeEeecchhcCCHHHHHHHHHHHHHcCCEEEecCCC
Confidence 8888999888889999998877543222 77999999999999988875
|
| >3ugv_A Enolase; enzyme function initiative, EFI, lyase; 2.30A {Alpha proteobacterium BAL199} | Back alignment and structure |
|---|
Probab=85.34 E-value=7.8 Score=33.83 Aligned_cols=157 Identities=10% Similarity=-0.031 Sum_probs=95.3
Q ss_pred CHHHHHHHHHHHHHC---CCCEEeCcCCcCCCcHHHHHHHHHhcCCCCCEEEEeccCccCCCCcccccCCChHHHHHHHH
Q 025500 39 SEEDGISMIKHAFSK---GITFFDTADVYGQNANEVLLGKALKQLPREKIQVATKFGIAGIGVAGVIVKGAPDYVRSCCE 115 (252)
Q Consensus 39 ~~~~~~~~l~~A~~~---Gin~~Dta~~Yg~g~se~~ig~~l~~~~R~~~~i~tK~~~~~~~~~~~~~~~~~~~i~~~~~ 115 (252)
+.++..+..+.+++. |++.|-.--...+-..+...=+++++.-..++.|...... .++.+...+ +-
T Consensus 171 ~~e~~~~~a~~~~~~~~~G~~~iKlKvG~~~~~~d~~~v~avR~a~G~~~~l~vDaN~----------~~~~~~A~~-~~ 239 (390)
T 3ugv_A 171 PAEVAAEAVELKAEGQGTGFKGLKLRMGRDDPAVDIETAEAVWDAVGRDTALMVDFNQ----------GLDMAEAMH-RT 239 (390)
T ss_dssp HHHHHHHHHHHHHTTCTTCCSEEEEECCCSSHHHHHHHHHHHHHHHCTTSEEEEECTT----------CCCHHHHHH-HH
T ss_pred CHHHHHHHHHHHHHhhhCCCcEEEEecCCCCHHHHHHHHHHHHHHhCCCCEEEEECCC----------CCCHHHHHH-HH
Confidence 578888888999999 9998875422111012222334555421233444433321 234544332 33
Q ss_pred HHHHHcCCCcccEEEccCCCCCCCHHHHHHHHHHHHHcCCc-cEEEccCCCHHHHHHHhhcCCceEEeeecCccccch-h
Q 025500 116 ASLKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKI-KYIGLSEASPGTIRRAHAVHPITAVQMEWSLWTRDI-E 193 (252)
Q Consensus 116 ~sL~~Lg~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~G~i-r~iGvs~~~~~~l~~~~~~~~~~~~q~~~~~~~~~~-~ 193 (252)
+.|+.+++ .++..|-... .++.+.+++++-.+ -..|=+-++...+.++++....+++|+..+..-.-. -
T Consensus 240 ~~l~~~~i-----~~iEqP~~~~----d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~a~d~v~ik~~~~GGit~~ 310 (390)
T 3ugv_A 240 RQIDDLGL-----EWIEEPVVYD----NFDGYAQLRHDLKTPLMIGENFYGPREMHQALQAGACDLVMPDFMRIGGVSGW 310 (390)
T ss_dssp HHHTTSCC-----SEEECCSCTT----CHHHHHHHHHHCSSCEEECTTCCSHHHHHHHHHTTCCSEECCBHHHHTHHHHH
T ss_pred HHHHhhCC-----CEEECCCCcc----cHHHHHHHHHhcCCCEEeCCCcCCHHHHHHHHHcCCCCEEEeCccccCCHHHH
Confidence 44555554 4455664432 35667777776444 344556688999999998888999999876643211 2
Q ss_pred hhHHHHHHHhCCeEEecccCcc
Q 025500 194 EEIIPLCRELGIGIVPYSPLGR 215 (252)
Q Consensus 194 ~~l~~~~~~~gi~v~a~spl~~ 215 (252)
..+.+.|+++|+.+...+.+..
T Consensus 311 ~~i~~~A~~~gi~~~~h~~~~a 332 (390)
T 3ugv_A 311 MRAAGVAGAWGIPMSTHLYPEV 332 (390)
T ss_dssp HHHHHHHHHHTCCBCCBSCHHH
T ss_pred HHHHHHHHHcCCEEeecCHHHH
Confidence 6899999999999987766543
|
| >3tji_A Mandelate racemase/muconate lactonizing enzyme, N domain protein; enolase, dehydratase, enzyme function initiative, EFI, lyase; 1.80A {Enterobacter SP} | Back alignment and structure |
|---|
Probab=85.07 E-value=7.8 Score=34.25 Aligned_cols=155 Identities=13% Similarity=0.143 Sum_probs=94.4
Q ss_pred CHHHHHHHHHHHHHCCCCEEeCcC-CcC-------------CC---------cHHHHHHHHHhcCCCCCEEEEeccCccC
Q 025500 39 SEEDGISMIKHAFSKGITFFDTAD-VYG-------------QN---------ANEVLLGKALKQLPREKIQVATKFGIAG 95 (252)
Q Consensus 39 ~~~~~~~~l~~A~~~Gin~~Dta~-~Yg-------------~g---------~se~~ig~~l~~~~R~~~~i~tK~~~~~ 95 (252)
+.++..+..+.+++.|++.|-.-- .++ +| +....+=+++++.--.++-|......
T Consensus 154 ~~e~~~~~a~~~~~~G~~~iKlKvG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~e~v~avR~avG~d~~L~vDaN~-- 231 (422)
T 3tji_A 154 TLEALFASVDALIAQGYRHIRCQLGFYGGTPSALHAPDNPTPGAWFDQQEYMSNTVEMFHALREKYGWKLHILHDVHE-- 231 (422)
T ss_dssp SHHHHHHHHHHHHHTTCSEEEEEESCCCBCGGGSCCCSSCCSSEECCHHHHHHHHHHHHHHHHHHHCSSSEEEEECTT--
T ss_pred CHHHHHHHHHHHHHcCCCEEEEeeccCCcccccccccccccccccccchhHHHHHHHHHHHHHHHcCCCCEEEEECCC--
Confidence 678888899999999999887421 111 01 01112224455421234444444321
Q ss_pred CCCcccccCCChHHHHHHHHHHHHHcCCCcccEEEccCCCCCCCHHHHHHHHHHHHHcCCcc-EEEccCCCHHHHHHHhh
Q 025500 96 IGVAGVIVKGAPDYVRSCCEASLKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIK-YIGLSEASPGTIRRAHA 174 (252)
Q Consensus 96 ~~~~~~~~~~~~~~i~~~~~~sL~~Lg~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~G~ir-~iGvs~~~~~~l~~~~~ 174 (252)
.++.+...+ +-+.|+.++++++ ..|-.. +.++.+.+++++-.|. ..|=+-++.+.++++++
T Consensus 232 --------~~~~~~A~~-~~~~Le~~~i~~i-----EqP~~~----~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~ll~ 293 (422)
T 3tji_A 232 --------RLFPQQAVQ-LAKQLEPFQPYFI-----EDILPP----QQSAWLEQVRQQSCVPLALGELFNNPAEWHDLIV 293 (422)
T ss_dssp --------CSCHHHHHH-HHHHHGGGCCSEE-----ECCSCG----GGGGGHHHHHHHCCCCEEECTTCCSGGGTHHHHH
T ss_pred --------CCCHHHHHH-HHHHHHhhCCCeE-----ECCCCh----hhHHHHHHHHhhCCCCEEEeCCcCCHHHHHHHHh
Confidence 235544433 3345666665544 455332 2366777887765544 33445577888999998
Q ss_pred cCCceEEeeecCccccchh-hhHHHHHHHhCCeEEecccC
Q 025500 175 VHPITAVQMEWSLWTRDIE-EEIIPLCRELGIGIVPYSPL 213 (252)
Q Consensus 175 ~~~~~~~q~~~~~~~~~~~-~~l~~~~~~~gi~v~a~spl 213 (252)
....+++|+..+..-.-.+ ..+.+.|+++|+.++..++.
T Consensus 294 ~ga~d~v~~k~~~~GGit~~~kia~lA~a~gv~v~~h~~~ 333 (422)
T 3tji_A 294 NRRIDFIRCHVSQIGGITPALKLAHLCQAFGVRLAWHGPG 333 (422)
T ss_dssp TTCCSEECCCGGGGTSHHHHHHHHHHHHHTTCEECCCCCS
T ss_pred cCCCCEEecCccccCCHHHHHHHHHHHHHcCCEEEecCCC
Confidence 8889999998876543222 77999999999999887773
|
| >3mqt_A Mandelate racemase/muconate lactonizing protein; PSI-II, NYSGXRC, muconate lactonizing EN structural genomics, protein structure initiative; 2.10A {Shewanella pealeana} | Back alignment and structure |
|---|
Probab=84.63 E-value=19 Score=31.26 Aligned_cols=151 Identities=11% Similarity=0.036 Sum_probs=89.7
Q ss_pred HHHHHHHHHHHCCCCEEeC-cCCc--CCCcHHHHHHHHHhcCCCCCEEEEeccCccCCCCcccccCC-ChHHHHHHHHHH
Q 025500 42 DGISMIKHAFSKGITFFDT-ADVY--GQNANEVLLGKALKQLPREKIQVATKFGIAGIGVAGVIVKG-APDYVRSCCEAS 117 (252)
Q Consensus 42 ~~~~~l~~A~~~Gin~~Dt-a~~Y--g~g~se~~ig~~l~~~~R~~~~i~tK~~~~~~~~~~~~~~~-~~~~i~~~~~~s 117 (252)
+..+..+.+.+.|++.|=. --.. .+-.....+=+++++.-..++-|...... .+ +.+...+ +-+.
T Consensus 155 ~~~~~a~~~~~~G~~~~K~~k~g~~~~~~~~d~~~v~avR~a~G~d~~l~vDan~----------~~~~~~~A~~-~~~~ 223 (394)
T 3mqt_A 155 AYKPLIAKAKERGAKAVKVCIIPNDKVSDKEIVAYLRELREVIGWDMDMMVDCLY----------RWTDWQKARW-TFRQ 223 (394)
T ss_dssp HHHHHHHHHHHTTCSEEEEECCCCTTSCHHHHHHHHHHHHHHHCSSSEEEEECTT----------CCSCHHHHHH-HHHH
T ss_pred HHHHHHHHHHHcCCCEEEecccCCCccCHHHHHHHHHHHHHHhCCCCeEEEECCC----------CCCCHHHHHH-HHHH
Confidence 5556788889999998875 2111 11012222334555421233333333211 24 4444433 3345
Q ss_pred HHHcCCCcccEEEccCCCCCCCHHHHHHHHHHHHHcCCccEE-EccCCCHHHHHHHhhcCCceEEeeecCccccchh-hh
Q 025500 118 LKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYI-GLSEASPGTIRRAHAVHPITAVQMEWSLWTRDIE-EE 195 (252)
Q Consensus 118 L~~Lg~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~G~ir~i-Gvs~~~~~~l~~~~~~~~~~~~q~~~~~~~~~~~-~~ 195 (252)
|+.+++++ ++.|-... .++.+.+++++-.|.-+ |=+-++.+.++++++....+++|+..+..-.-.+ ..
T Consensus 224 L~~~~i~~-----iEeP~~~~----~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~l~~~~~d~v~~k~~~~GGit~~~~ 294 (394)
T 3mqt_A 224 LEDIDLYF-----IEACLQHD----DLIGHQKLAAAINTRLCGAEMSTTRFEAQEWLEKTGISVVQSDYNRCGGVTELLR 294 (394)
T ss_dssp TGGGCCSE-----EESCSCTT----CHHHHHHHHHHSSSEEEECTTCCHHHHHHHHHHHHCCSEECCCTTTSSCHHHHHH
T ss_pred HhhcCCeE-----EECCCCcc----cHHHHHHHHhhCCCCEEeCCCcCCHHHHHHHHHcCCCCeEecCccccCCHHHHHH
Confidence 66666554 45564332 36677888877555543 3344677888899888889999998877543222 77
Q ss_pred HHHHHHHhCCeEEeccc
Q 025500 196 IIPLCRELGIGIVPYSP 212 (252)
Q Consensus 196 l~~~~~~~gi~v~a~sp 212 (252)
+.+.|+++|+.++..+.
T Consensus 295 ia~~A~~~gi~~~~h~~ 311 (394)
T 3mqt_A 295 IMDICEHHNAQLMPHNW 311 (394)
T ss_dssp HHHHHHHHTCEECCCCC
T ss_pred HHHHHHHcCCEEeccCC
Confidence 99999999999987764
|
| >2al1_A Enolase 1, 2-phospho-D-; beta barrel, lyase; HET: PEP 2PG; 1.50A {Saccharomyces cerevisiae} SCOP: c.1.11.1 d.54.1.1 PDB: 1ebg_A 1ebh_A* 1one_A* 2one_A* 1p48_A* 1p43_A* 1l8p_A 4enl_A 1nel_A 1els_A 3enl_A 5enl_A* 6enl_A 7enl_A* 2al2_A* 2al2_B* 2xh7_A* 2xgz_A* 2xh2_A* 2xh4_A* ... | Back alignment and structure |
|---|
Probab=84.28 E-value=8.1 Score=34.37 Aligned_cols=97 Identities=10% Similarity=0.004 Sum_probs=71.3
Q ss_pred CChHHHHHHHHHHHHHcCCCcccEEEccCCCCCCCHHHHHHHHHHHHHcCCccEEEccC--CCHHHHHHHhhcCCceEEe
Q 025500 105 GAPDYVRSCCEASLKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSE--ASPGTIRRAHAVHPITAVQ 182 (252)
Q Consensus 105 ~~~~~i~~~~~~sL~~Lg~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~G~ir~iGvs~--~~~~~l~~~~~~~~~~~~q 182 (252)
++++...+.+.+.++.+ +++++..|-...+ |+.+.+|.++..|.-+|=-. .+++.+.++++....+++|
T Consensus 273 ~t~~eai~~~~~~l~~y-----~i~~iEdPl~~dD----~~g~~~l~~~~~ipI~gDE~~vt~~~~~~~~i~~~a~d~i~ 343 (436)
T 2al1_A 273 LTGPQLADLYHSLMKRY-----PIVSIEDPFAEDD----WEAWSHFFKTAGIQIVADDLTVTNPKRIATAIEKKAADALL 343 (436)
T ss_dssp BCHHHHHHHHHHHHHHS-----CEEEEECCSCTTC----HHHHHHHHTTCCSEEEESTTTTTCHHHHHHHHHTTCCSEEE
T ss_pred CCHHHHHHHHHHHHHhC-----CcEEEECCCCCcC----HHHHHHHHhcCCCeEEECCcccCCHHHHHHHHHhCCCCEEE
Confidence 46676666677777764 5788888865433 77788888887776665544 3689999999988899999
Q ss_pred eecCccccchh-hhHHHHHHHhCCeEEec
Q 025500 183 MEWSLWTRDIE-EEIIPLCRELGIGIVPY 210 (252)
Q Consensus 183 ~~~~~~~~~~~-~~l~~~~~~~gi~v~a~ 210 (252)
+..|-.-.-.+ .++.+.|+++|+.++..
T Consensus 344 ikv~qiGGitea~~ia~lA~~~g~~~~~s 372 (436)
T 2al1_A 344 LKVNQIGTLSESIKAAQDSFAAGWGVMVS 372 (436)
T ss_dssp ECHHHHCCHHHHHHHHHHHHHTTCEEEEE
T ss_pred echhhcCCHHHHHHHHHHHHHcCCeEEEe
Confidence 98765433222 68999999999987653
|
| >3p3b_A Mandelate racemase/muconate lactonizing protein; enolase superfamily fold, galacturonate dehydratase, D-tartr galacturonate, lyase; HET: TAR; 1.65A {Geobacillus SP} PDB: 3ops_A* 3n4f_A* 3qpe_A* | Back alignment and structure |
|---|
Probab=84.25 E-value=9.8 Score=33.14 Aligned_cols=150 Identities=12% Similarity=0.081 Sum_probs=86.9
Q ss_pred HHHHHHHHHHHHCCCCEEeC--cCCcCCC----cHH---HHHHHHHhc--CCCCCEEEEeccCccCCCCcccccCCChHH
Q 025500 41 EDGISMIKHAFSKGITFFDT--ADVYGQN----ANE---VLLGKALKQ--LPREKIQVATKFGIAGIGVAGVIVKGAPDY 109 (252)
Q Consensus 41 ~~~~~~l~~A~~~Gin~~Dt--a~~Yg~g----~se---~~ig~~l~~--~~R~~~~i~tK~~~~~~~~~~~~~~~~~~~ 109 (252)
++..+....+.+.|++.|-. +..|+.- ..+ +.+ +++++ .+.-.+.|=.. ..++.+.
T Consensus 150 e~~~~~a~~~~~~Gf~~vKik~g~~~~~~~~~~~~~~~~e~v-~avR~~~g~d~~l~vDan------------~~~~~~~ 216 (392)
T 3p3b_A 150 ALMQEEAMQGYAKGQRHFKIKVGRGGRHMPLWEGTKRDIAIV-RGISEVAGPAGKIMIDAN------------NAYNLNL 216 (392)
T ss_dssp HHHHHHHHHHHHTTCCCEEEECCHHHHTSCHHHHHHHHHHHH-HHHHHHHCTTCCEEEECT------------TCCCHHH
T ss_pred HHHHHHHHHHHHhCCCEEEECcCcCcccCCccccHHHHHHHH-HHHHHHhCCCCeEEEECC------------CCCCHHH
Confidence 66677778888999987764 2222110 011 222 23333 23333444221 1245544
Q ss_pred HHHHHHHHHHHcCCCcccEEEccCCCCCCCHHHHHHHHHHHHHc-----CCccEEEccCCCHHHHHHHhhcCCceEEeee
Q 025500 110 VRSCCEASLKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEE-----GKIKYIGLSEASPGTIRRAHAVHPITAVQME 184 (252)
Q Consensus 110 i~~~~~~sL~~Lg~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~-----G~ir~iGvs~~~~~~l~~~~~~~~~~~~q~~ 184 (252)
..+- +++|. ..++.++..|-. +.++.+.+++++ -.|.-.+---++.+.++++++....+++|+.
T Consensus 217 ai~~----~~~l~--~~~i~~iE~P~~-----~d~~~~~~l~~~l~~~g~~iPIa~dE~~~~~~~~~~i~~~~~d~v~ik 285 (392)
T 3p3b_A 217 TKEV----LAALS--DVNLYWLEEAFH-----EDEALYEDLKEWLGQRGQNVLIADGEGLASPHLIEWATRGRVDVLQYD 285 (392)
T ss_dssp HHHH----HHHTT--TSCEEEEECSSS-----CCHHHHHHHHHHHHHHTCCCEEEECCSSCCTTHHHHHHTTSCCEECCB
T ss_pred HHHH----HHHHH--hcCCCEEecCCc-----ccHHHHHHHHHhhccCCCCccEEecCCCCHHHHHHHHHcCCCCEEEeC
Confidence 4433 33332 245667777754 235666666665 3444333224566788888888889999999
Q ss_pred cCccccchh-hhHHHHHHHhCCeEEecccCccc
Q 025500 185 WSLWTRDIE-EEIIPLCRELGIGIVPYSPLGRG 216 (252)
Q Consensus 185 ~~~~~~~~~-~~l~~~~~~~gi~v~a~spl~~G 216 (252)
.+.. .-.+ ..+.+.|+++|+.++.. .+..+
T Consensus 286 ~~~~-Git~~~~i~~~A~~~gi~~~~h-~~es~ 316 (392)
T 3p3b_A 286 IIWP-GFTHWMELGEKLDAHGLRSAPH-CYGNA 316 (392)
T ss_dssp TTTB-CHHHHHHHHHHHHHTTCEECCB-CCSCT
T ss_pred cccc-CHHHHHHHHHHHHHcCCEEEec-CCCCH
Confidence 8876 4222 68999999999999886 44443
|
| >3go2_A Putative L-alanine-DL-glutamate epimerase; structural genomics, isomerase, PSI-2; 1.70A {Burkholderia xenovorans} PDB: 2oo6_A 3sn0_A 3sn1_A* 3sn4_A* | Back alignment and structure |
|---|
Probab=84.06 E-value=19 Score=31.47 Aligned_cols=150 Identities=7% Similarity=0.031 Sum_probs=89.5
Q ss_pred CHHHHHHHHHHHHHCCCCEEeCcC---------Cc--CCC------c--H------HHHHHHHHhcCCCCCEEEEeccCc
Q 025500 39 SEEDGISMIKHAFSKGITFFDTAD---------VY--GQN------A--N------EVLLGKALKQLPREKIQVATKFGI 93 (252)
Q Consensus 39 ~~~~~~~~l~~A~~~Gin~~Dta~---------~Y--g~g------~--s------e~~ig~~l~~~~R~~~~i~tK~~~ 93 (252)
+.++..+..+.+.+.|++.|=.-- .+ |.+ . . ...+=+++++.--.++-|......
T Consensus 143 ~~e~~~~~a~~~~~~Gf~~iKlKv~~~~~~~~~~~~pG~~~~~~~~~~~~~~~~~~~~e~v~avR~avG~d~~l~vDaN~ 222 (409)
T 3go2_A 143 DLDGVKRTAEEARERQFRAIKTNIFIHDDGPLHAWRPGFAVPFQPALNVDRKVLRNLRAHLEALRDGAGPDVEILLDLNF 222 (409)
T ss_dssp SHHHHHHHHHHHHHTTCCEEEECCEECSSSSCEECBGGGTBSCCTTCCCCHHHHHHHHHHHHHHHHHHCTTSEEEEECTT
T ss_pred CHHHHHHHHHHHHHcCCCEEEEcccccccccccccccCCCccCCcccccchHHHHHHHHHHHHHHHHhCCCCEEEEECCC
Confidence 678888889999999999775321 01 100 0 0 012224455421233444434321
Q ss_pred cCCCCcccccCCChHHHHHHHHHHHHHcCCCcccEEEccCCCCCCCHHHHHHHHHHHHHcCCccEE-EccCCCHHHHHHH
Q 025500 94 AGIGVAGVIVKGAPDYVRSCCEASLKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYI-GLSEASPGTIRRA 172 (252)
Q Consensus 94 ~~~~~~~~~~~~~~~~i~~~~~~sL~~Lg~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~G~ir~i-Gvs~~~~~~l~~~ 172 (252)
.++.+...+ +-+.|+.+++++++ .|.. .++.+.+++++-.|.-+ |=+-++.+.++++
T Consensus 223 ----------~~~~~~A~~-~~~~L~~~~i~~iE-----~P~~------d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~ 280 (409)
T 3go2_A 223 ----------NAKPEGYLK-ILRELADFDLFWVE-----IDSY------SPQGLAYVRNHSPHPISSCETLFGIREFKPF 280 (409)
T ss_dssp ----------CSCHHHHHH-HHHHTTTSCCSEEE-----CCCS------CHHHHHHHHHTCSSCEEECTTCCHHHHHHHH
T ss_pred ----------CCCHHHHHH-HHHHHhhcCCeEEE-----eCcC------CHHHHHHHHhhCCCCEEeCCCcCCHHHHHHH
Confidence 234544333 23445566655554 4432 36677888887655533 3344677889999
Q ss_pred hhcCCceEEeeecCccccchh-hhHHHHHHHhCCeEEecc
Q 025500 173 HAVHPITAVQMEWSLWTRDIE-EEIIPLCRELGIGIVPYS 211 (252)
Q Consensus 173 ~~~~~~~~~q~~~~~~~~~~~-~~l~~~~~~~gi~v~a~s 211 (252)
++....+++|+..+. -.-.+ ..+.+.|+++|+.++...
T Consensus 281 i~~~~~d~v~~k~~~-GGit~~~~ia~~A~~~gi~~~~h~ 319 (409)
T 3go2_A 281 FDANAVDVAIVDTIW-NGVWQSMKIAAFADAHDINVAPHN 319 (409)
T ss_dssp HHTTCCSEEEECHHH-HCHHHHHHHHHHHHHTTCEEEECC
T ss_pred HHhCCCCEEEeCCCC-CCHHHHHHHHHHHHHcCCEEeecC
Confidence 988889999998865 22112 679999999999998743
|
| >2ftp_A Hydroxymethylglutaryl-COA lyase; structural genomics, PSI, protein structure initiativ midwest center for structural genomics, MCSG; 2.40A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=84.04 E-value=3.4 Score=34.78 Aligned_cols=103 Identities=10% Similarity=0.029 Sum_probs=63.8
Q ss_pred CChHHHHHHHHHHHHHcCCCcccEEEccCCCCCCCHHHHHHHHHHHHHcCCccEEEccCCCHHHHHHHhhcCCceEEeee
Q 025500 105 GAPDYVRSCCEASLKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPGTIRRAHAVHPITAVQME 184 (252)
Q Consensus 105 ~~~~~i~~~~~~sL~~Lg~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~G~ir~iGvs~~~~~~l~~~~~~~~~~~~q~~ 184 (252)
++.+. +..+-+.|.++|+++|..-...+|.......+.++.+..+.+...++..++. -+.+.++++.+. .++.+.+.
T Consensus 27 ~~~e~-k~~i~~~L~~~Gv~~IE~g~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~l~-~~~~~i~~a~~a-G~~~v~i~ 103 (302)
T 2ftp_A 27 IEVAD-KIRLVDDLSAAGLDYIEVGSFVSPKWVPQMAGSAEVFAGIRQRPGVTYAALA-PNLKGFEAALES-GVKEVAVF 103 (302)
T ss_dssp CCHHH-HHHHHHHHHHTTCSEEEEEECSCTTTCGGGTTHHHHHHHSCCCTTSEEEEEC-CSHHHHHHHHHT-TCCEEEEE
T ss_pred CCHHH-HHHHHHHHHHcCcCEEEECCCcCccccccccCHHHHHHHhhhcCCCEEEEEe-CCHHHHHHHHhC-CcCEEEEE
Confidence 44444 4566678899999999998866654222222344445555545566666665 477888888875 34455543
Q ss_pred cCccc--------cc------hhhhHHHHHHHhCCeEEec
Q 025500 185 WSLWT--------RD------IEEEIIPLCRELGIGIVPY 210 (252)
Q Consensus 185 ~~~~~--------~~------~~~~l~~~~~~~gi~v~a~ 210 (252)
....+ .. ...+.+++|+++|+.|.++
T Consensus 104 ~~~s~~~~~~~~~~s~ee~l~~~~~~v~~a~~~G~~V~~~ 143 (302)
T 2ftp_A 104 AAASEAFSQRNINCSIKDSLERFVPVLEAARQHQVRVRGY 143 (302)
T ss_dssp EESCHHHHHHHHSSCHHHHHHHHHHHHHHHHHTTCEEEEE
T ss_pred EecCHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCCeEEEE
Confidence 22211 11 1167899999999999743
|
| >4g8t_A Glucarate dehydratase; enolase, enzyme function INI EFI, structural genomics, lyase; 1.70A {Actinobacillus succinogenes} PDB: 1ec7_A 1ec8_A* 1ec9_A* 1ecq_A* 1jdf_A* 3pwi_A* 1jct_A* 3pwg_A* 1bqg_A | Back alignment and structure |
|---|
Probab=83.76 E-value=4.9 Score=36.02 Aligned_cols=159 Identities=14% Similarity=0.101 Sum_probs=91.8
Q ss_pred CHHHHHHHHHHHHHC-CCCEEeCcCCcCCCcHHHHHHHHHhc-CCCCCEEEEeccCccCCCCcccccCCChHHHHHHHHH
Q 025500 39 SEEDGISMIKHAFSK-GITFFDTADVYGQNANEVLLGKALKQ-LPREKIQVATKFGIAGIGVAGVIVKGAPDYVRSCCEA 116 (252)
Q Consensus 39 ~~~~~~~~l~~A~~~-Gin~~Dta~~Yg~g~se~~ig~~l~~-~~R~~~~i~tK~~~~~~~~~~~~~~~~~~~i~~~~~~ 116 (252)
+.++..+....+++. |++.|=.--...++..+...-+++++ ++.-++.| -.- ..++.+... +
T Consensus 202 ~~~~~~~~~~~~~~~~Gf~~~KlKvG~~~~~~di~~v~avrea~pd~~L~v--DaN----------~~wt~~~Ai----~ 265 (464)
T 4g8t_A 202 TPESVVRLAEAAYEKYGFNDFKLKGGVLDGFEEAEAVTALAKRFPDARITL--DPN----------GAWSLDEAV----K 265 (464)
T ss_dssp SHHHHHHHHHHHHHHHCCSCEEEECSSSCHHHHHHHHHHHHHHSTTCCEEE--ECT----------TCBCHHHHH----H
T ss_pred CHHHHHHHHHHHHHHcCCCeEEEeCCCCCHHHHHHHHHHHHhhCCCceEEE--ECC----------CccCHHHHH----H
Confidence 455555555555554 99876432211121222223345555 54333333 111 123444333 3
Q ss_pred HHHHcCCCcccEEEccCCCCCCCHHHHHHHHHHHHHc-CCccEEEccCCCHHHHHHHhhcCCceEEeeecCccccchhhh
Q 025500 117 SLKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEE-GKIKYIGLSEASPGTIRRAHAVHPITAVQMEWSLWTRDIEEE 195 (252)
Q Consensus 117 sL~~Lg~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~-G~ir~iGvs~~~~~~l~~~~~~~~~~~~q~~~~~~~~~~~~~ 195 (252)
.++.|. ++ +.++..|-...+.....+.+.+++++ +.=-+.|=+-++...+.++++....+++|......--..-..
T Consensus 266 ~~~~le-~~--l~wiEeP~~~~d~~~~~e~~a~lr~~~~iPIa~gE~~~~~~~~~~~i~~~avdi~~~d~~~GGit~~~k 342 (464)
T 4g8t_A 266 IGKQLK-GV--LAYAEDPCGAEQGYSGREIMAEFRRATGLPTATNMIATDWRQMGHTISLQSVDIPLADPHFWTMQGSIR 342 (464)
T ss_dssp HHHHTT-TT--CSCEESCBCCBTTBCHHHHHHHHHHHHCCCEEESSSSCSHHHHHHHHHHTCCSEEBCCHHHHCHHHHHH
T ss_pred HHHHhh-hc--cceeecCcCcccccchHHHHHhhhccCCCCccccccccchhhHHHHHHhhCCCEEeccccccchHHHHH
Confidence 455553 23 45667775444443445667777765 444577888899999999998888889998743321111277
Q ss_pred HHHHHHHhCCeEEecccCccc
Q 025500 196 IIPLCRELGIGIVPYSPLGRG 216 (252)
Q Consensus 196 l~~~~~~~gi~v~a~spl~~G 216 (252)
+.+.|+++|+.+...+....+
T Consensus 343 ia~lA~~~gi~v~~h~~~~~~ 363 (464)
T 4g8t_A 343 VAQMCHEWGLTWGSHSNNHFD 363 (464)
T ss_dssp HHHHHHHHTCCCBCCCCSCCH
T ss_pred HHHHHHHcCCEEEEcCCcccH
Confidence 999999999999887655433
|
| >4h2h_A Mandelate racemase/muconate lactonizing enzyme; enolase, mandelate racemase subgroup, enzyme function initia EFI, structural genomics; HET: 0XW; 1.70A {Pelagibaca bermudensis} PDB: 2pmq_A* | Back alignment and structure |
|---|
Probab=83.67 E-value=18 Score=31.28 Aligned_cols=154 Identities=8% Similarity=-0.010 Sum_probs=90.5
Q ss_pred CHHHHHHHHHHHHHCCCCEEeCcCCcCCCc-HHHHHHHHHhc-CCCCCEEEEeccCccCCCCcccccCCChHHHHHHHHH
Q 025500 39 SEEDGISMIKHAFSKGITFFDTADVYGQNA-NEVLLGKALKQ-LPREKIQVATKFGIAGIGVAGVIVKGAPDYVRSCCEA 116 (252)
Q Consensus 39 ~~~~~~~~l~~A~~~Gin~~Dta~~Yg~g~-se~~ig~~l~~-~~R~~~~i~tK~~~~~~~~~~~~~~~~~~~i~~~~~~ 116 (252)
+.++..+....+.+.|++.|=.--...+-. ..+.+ +++++ ++-+++.|..-.- ..++.+... +
T Consensus 150 ~~~~~~~~a~~~~~~G~~~~KiKvg~~~~~~di~~v-~~vr~a~~g~~~~l~vDaN----------~~~~~~~A~----~ 214 (376)
T 4h2h_A 150 EPDEAARQALEKQREGYSRLQVKLGARPIEIDIEAI-RKVWEAVRGTGIALAADGN----------RGWTTRDAL----R 214 (376)
T ss_dssp CHHHHHHHHHHHHHHTCSEEEEECCSSCHHHHHHHH-HHHHHHHTTSCCEEEEECT----------TCCCHHHHH----H
T ss_pred CHHHHHHHHHHHHhcCceEEEEecCCCCHHHHHHHH-HHHHhhccCCeeEEEEeec----------cCCCHHHHH----H
Confidence 567777778888889999775422111101 11223 23332 2223333322221 123444433 3
Q ss_pred HHHHcCCCcccEEEccCCCCCCCHHHHHHHHHHHHHcCCc-cEEEccCCCHHHHHHHhhcCCceEEeeecCccccchh-h
Q 025500 117 SLKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKI-KYIGLSEASPGTIRRAHAVHPITAVQMEWSLWTRDIE-E 194 (252)
Q Consensus 117 sL~~Lg~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~G~i-r~iGvs~~~~~~l~~~~~~~~~~~~q~~~~~~~~~~~-~ 194 (252)
.++.| +..++ ++..|-. + ++.++++++.-.+ -+.|=+-++...+.++.+...++++|+...-.-.-.+ .
T Consensus 215 ~~~~l--~~~~~-~iEeP~~--~----~~~~~~l~~~~~~pia~dE~~~~~~~~~~~~~~~~~d~v~~d~~~~GGit~~~ 285 (376)
T 4h2h_A 215 FSREC--PDIPF-VMEQPCN--S----FEDLEAIRPLCHHALYMDEDGTSLNTVITAAATSLVDGFGMKVSRIGGLQHMR 285 (376)
T ss_dssp HHHHC--TTSCE-EEESCSS--S----HHHHHHHGGGCCSCEEESTTCCSHHHHHHHHHTTCCSEECCBHHHHTSHHHHH
T ss_pred HHHHH--hhccc-cccCCcc--h----hhhHhhhhhcccCccccCcccCCHHHHHHHHHhhccCccccccceeCCcHHHH
Confidence 34455 34565 6777642 2 4556777666443 3455666888999999888888999997654332112 6
Q ss_pred hHHHHHHHhCCeEEecccCccc
Q 025500 195 EIIPLCRELGIGIVPYSPLGRG 216 (252)
Q Consensus 195 ~l~~~~~~~gi~v~a~spl~~G 216 (252)
.+.+.|+++|+.+...+.++++
T Consensus 286 ~ia~~a~~~gi~~~~~~~~~~~ 307 (376)
T 4h2h_A 286 AFRDFCAARNLPHTCDDAWGGD 307 (376)
T ss_dssp HHHHHHHHHTCCEECBCSSCSH
T ss_pred HHHHHHHHcCCCEEeCCCCccH
Confidence 7889999999999988776654
|
| >3vcn_A Mannonate dehydratase; enolase, magnesium binding site, enzyme function initiative, lyase; 1.45A {Caulobacter crescentus} PDB: 4gme_A* 4fi4_A 3thu_A | Back alignment and structure |
|---|
Probab=83.21 E-value=16 Score=32.19 Aligned_cols=154 Identities=8% Similarity=0.006 Sum_probs=93.7
Q ss_pred CHHHHHHHHHHHHHCCCCEEeCc-------CCcC---------------CC-----------cHHHHHHHHHhcCCCCCE
Q 025500 39 SEEDGISMIKHAFSKGITFFDTA-------DVYG---------------QN-----------ANEVLLGKALKQLPREKI 85 (252)
Q Consensus 39 ~~~~~~~~l~~A~~~Gin~~Dta-------~~Yg---------------~g-----------~se~~ig~~l~~~~R~~~ 85 (252)
+.++..+..+.+++.|++.|=.- ..|| ++ ...+.+ +++++.-..++
T Consensus 150 ~~e~~~~~a~~~~~~Gf~~iKlKvg~~~~~~~~g~~~~~~~~~~~~~~~p~~~~~d~~~~~~~d~e~v-~avR~a~G~d~ 228 (425)
T 3vcn_A 150 TIEDTIAEAVKYKAMGYKAIRLQTGVPGLASTYGVSKDKMFYEPADNDLPTENIWSTAKYLNSVPKLF-ERAREVLGWDV 228 (425)
T ss_dssp SHHHHHHHHHHHHHTTCSEEEEEECCTTCSCCTTCSSCSSCCCCCCBSSCCEEEECHHHHHTTTHHHH-HHHHHHHCSSS
T ss_pred CHHHHHHHHHHHHHcCCCEEEEeecCccccccccccccccccCcccccccccccccchhHHHHHHHHH-HHHHHHcCCCC
Confidence 67888888999999999976421 0122 01 012223 45554111233
Q ss_pred EEEeccCccCCCCcccccCCChHHHHHHHHHHHHHcCCCcccEEEccCCCCCCCHHHHHHHHHHHHHcCCccE-EEccCC
Q 025500 86 QVATKFGIAGIGVAGVIVKGAPDYVRSCCEASLKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKY-IGLSEA 164 (252)
Q Consensus 86 ~i~tK~~~~~~~~~~~~~~~~~~~i~~~~~~sL~~Lg~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~G~ir~-iGvs~~ 164 (252)
-|...... .++.+...+ +-+.|+.++++++ +.|-... .++.+.+++++-.|.- .|=+-+
T Consensus 229 ~l~vDaN~----------~~~~~~A~~-~~~~L~~~~i~~i-----EqP~~~~----d~~~~~~l~~~~~iPIa~dE~~~ 288 (425)
T 3vcn_A 229 HLLHDVHH----------RLTPIEAAR-LGKDLEPYRLFWL-----EDSVPAE----NQAGFRLIRQHTTTPLAVGEIFA 288 (425)
T ss_dssp EEEEECTT----------CCCHHHHHH-HHHHHGGGCCSEE-----ECCSCCS----STTHHHHHHHHCCSCEEECTTCC
T ss_pred EEEEECCC----------CCCHHHHHH-HHHHHHhcCCCEE-----ECCCChh----hHHHHHHHHhcCCCCEEeCCCcC
Confidence 33333211 245554443 3345677766554 4554322 2556777777655543 344457
Q ss_pred CHHHHHHHhhcCCceEEeeecCccccchh-hhHHHHHHHhCCeEEecccC
Q 025500 165 SPGTIRRAHAVHPITAVQMEWSLWTRDIE-EEIIPLCRELGIGIVPYSPL 213 (252)
Q Consensus 165 ~~~~l~~~~~~~~~~~~q~~~~~~~~~~~-~~l~~~~~~~gi~v~a~spl 213 (252)
+.+.++++++....+++|+..+..-.-.+ ..+.+.|+++|+.++..+.+
T Consensus 289 ~~~~~~~~i~~~a~d~v~~k~~~~GGit~~~~ia~~A~~~gi~~~~h~~~ 338 (425)
T 3vcn_A 289 HVWDAKQLIEEQLIDYLRATVLHAGGITNLKKIAAFADLHHVKTGCHGAT 338 (425)
T ss_dssp SGGGTHHHHHTTCCSEECCCTTTTTHHHHHHHHHHHHGGGTCEECCCCCT
T ss_pred CHHHHHHHHHcCCCCeEecChhhcCCHHHHHHHHHHHHHcCCEEeeccCC
Confidence 78889999988889999998877543212 77999999999999888775
|
| >1wue_A Mandelate racemase/muconate lactonizing enzyme FA protein; structural genomics, unknown function, nysgxrc target T2185; 2.10A {Enterococcus faecalis} SCOP: c.1.11.2 d.54.1.1 | Back alignment and structure |
|---|
Probab=83.00 E-value=14 Score=32.08 Aligned_cols=152 Identities=14% Similarity=0.069 Sum_probs=92.7
Q ss_pred CHHHHHHHHHHHHHCCCCEEeCcCCcCCCcHHHHHHHHHhc-CCCCCEEEEeccCccCCCCcccccCCChHHHHHHHHHH
Q 025500 39 SEEDGISMIKHAFSKGITFFDTADVYGQNANEVLLGKALKQ-LPREKIQVATKFGIAGIGVAGVIVKGAPDYVRSCCEAS 117 (252)
Q Consensus 39 ~~~~~~~~l~~A~~~Gin~~Dta~~Yg~g~se~~ig~~l~~-~~R~~~~i~tK~~~~~~~~~~~~~~~~~~~i~~~~~~s 117 (252)
+.++..+....+.+.|++.|=.-- |.....+.+ +++++ .+ ++.|..-.-. .++.+.. +.
T Consensus 161 ~~~~~~~~a~~~~~~G~~~~KiKv--g~~~d~~~v-~avr~a~~--~~~l~vDaN~----------~~~~~~a-----~~ 220 (386)
T 1wue_A 161 DLPQLLKQVQLAVEKGYQRVKLKI--RPGYDVEPV-ALIRQHFP--NLPLMVDANS----------AYTLADL-----PQ 220 (386)
T ss_dssp CHHHHHHHHHHHHHTTCSCEEEEC--BTTBSHHHH-HHHHHHCT--TSCEEEECTT----------CCCGGGH-----HH
T ss_pred CHHHHHHHHHHHHHhhhheEEEee--CcHHHHHHH-HHHHHhCC--CCeEEEeCCC----------CCCHHHH-----HH
Confidence 467777888888899999765321 112233444 45554 42 3333322211 1344333 22
Q ss_pred HHHcCCCcccEEEccCCCCCCCHHHHHHHHHHHHHcCCc-cEEEccCCCHHHHHHHhhcCCceEEeeecCccccchh-hh
Q 025500 118 LKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKI-KYIGLSEASPGTIRRAHAVHPITAVQMEWSLWTRDIE-EE 195 (252)
Q Consensus 118 L~~Lg~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~G~i-r~iGvs~~~~~~l~~~~~~~~~~~~q~~~~~~~~~~~-~~ 195 (252)
+++|. ..++.++..|-...+ ++.+.++.++-.+ -..|=+-++.+.+.++++....+++|+..+..-.-.+ ..
T Consensus 221 ~~~l~--~~~i~~iEqP~~~~d----~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~i~~~a~d~i~ik~~~~GGit~~~~ 294 (386)
T 1wue_A 221 LQRLD--HYQLAMIEQPFAADD----FLDHAQLQRELKTRICLDENIRSLKDCQVALALGSCRSINLKIPRVGGIHEALK 294 (386)
T ss_dssp HHGGG--GSCCSCEECCSCTTC----SHHHHHHHTTCSSCEEECTTCCSHHHHHHHHHHTCCSEEEECHHHHTSHHHHHH
T ss_pred HHHHH--hCCCeEEeCCCCccc----HHHHHHHHHhcCCCEEeCCccCCHHHHHHHHHcCCCCEEEEchhhhCCHHHHHH
Confidence 34442 246667777755433 5666777665443 3444555788999999888889999998766432212 68
Q ss_pred HHHHHHHhCCeEEecccCccc
Q 025500 196 IIPLCRELGIGIVPYSPLGRG 216 (252)
Q Consensus 196 l~~~~~~~gi~v~a~spl~~G 216 (252)
+.+.|+++|+.++..+.+..|
T Consensus 295 i~~~A~~~gi~~~~~~~~es~ 315 (386)
T 1wue_A 295 IAAFCQENDLLVWLGGMFESG 315 (386)
T ss_dssp HHHHHHHTTCEEEECCCCCCH
T ss_pred HHHHHHHCCCeEEECCCcccH
Confidence 999999999999988776543
|
| >3qy7_A Tyrosine-protein phosphatase YWQE; TIM barrel, polymerase and histindinol phosphatase(PHP)-like phosphatase, hydrolase; 1.62A {Bacillus subtilis} PDB: 3qy6_A | Back alignment and structure |
|---|
Probab=82.40 E-value=2.9 Score=34.52 Aligned_cols=159 Identities=14% Similarity=0.008 Sum_probs=85.5
Q ss_pred CHHHHHHHHHHHHHCCCCEEeCcCCcCCCc---HHHHHHHHHhc---C-CCCCEEEEeccCccCCCCcccccCCChHHHH
Q 025500 39 SEEDGISMIKHAFSKGITFFDTADVYGQNA---NEVLLGKALKQ---L-PREKIQVATKFGIAGIGVAGVIVKGAPDYVR 111 (252)
Q Consensus 39 ~~~~~~~~l~~A~~~Gin~~Dta~~Yg~g~---se~~ig~~l~~---~-~R~~~~i~tK~~~~~~~~~~~~~~~~~~~i~ 111 (252)
+.+++.++++.|.+.|++.|=.++++-.+. ..+.+-+.+.. . .+...-|....|..- ...++..
T Consensus 18 ~~~~sl~~~~~a~~~G~~~i~~T~H~~~~~~~~~~~~i~~~~~~l~~~~~~~~~~i~I~~G~Ev--------~~~~~~~- 88 (262)
T 3qy7_A 18 DSADSIEMARAAVRQGIRTIIATPHHNNGVYKNEPAAVREAADQLNKRLIKEDIPLHVLPGQEI--------RIYGEVE- 88 (262)
T ss_dssp SHHHHHHHHHHHHHTTCCEEECCCBSEETTEECCHHHHHHHHHHHHHHHHHTTCCCEEECCCEE--------ECCTTHH-
T ss_pred CHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHhcCCCCEEecCeEE--------ecchhHH-
Confidence 789999999999999999999988874321 12222222221 1 111111222333221 1222222
Q ss_pred HHHHH-HHHHcCCCcccEEEccCCCCCCCHHHHHHHHHHHHHcCCccEEEccC------CCHHHHHHHhhcCCceEEeee
Q 025500 112 SCCEA-SLKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSE------ASPGTIRRAHAVHPITAVQME 184 (252)
Q Consensus 112 ~~~~~-sL~~Lg~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~G~ir~iGvs~------~~~~~l~~~~~~~~~~~~q~~ 184 (252)
..+++ .+..|+ --|.+++..|... ......+.+.++.+.|.+--||=-. ...+.+.++.+.+ ..+|+.
T Consensus 89 ~~l~~~~~~~l~--~~~~vl~e~~~~~-~~~~~~~~l~~i~~~g~v~ILAHPeRy~~~~~~~~~l~~l~~~G--~~iEiN 163 (262)
T 3qy7_A 89 QDLAKRQLLSLN--DTKYILIEFPFDH-VPRYAEQLFYDLQLKGYIPVIAHPERNREIRENPSLLYHLVEKG--AASQIT 163 (262)
T ss_dssp HHHHTTCSCCGG--GSSEEEEECCTTC-CCTTHHHHHHHHHHTTCEEEEECGGGCHHHHHCTHHHHHHHHTT--CEEEEE
T ss_pred HHHhcCCCcEEC--CceEEEEeCCCcc-CHHHHHHHHHHHHHCCCcEEEECCCccccccccHHHHHHHHHCC--CEEEEE
Confidence 22332 222222 2356777766433 2345677888888999887776432 1234566666655 246666
Q ss_pred cCcccc---chhhhHHHHHHHhCCeEEecc
Q 025500 185 WSLWTR---DIEEEIIPLCRELGIGIVPYS 211 (252)
Q Consensus 185 ~~~~~~---~~~~~l~~~~~~~gi~v~a~s 211 (252)
.+.+.. .........|.++|+.++.-|
T Consensus 164 ~~s~~g~~g~~~~~~~~~~~~~gl~~~igS 193 (262)
T 3qy7_A 164 SGSLAGIFGKQLKAFSLRLVEANLIHFVAS 193 (262)
T ss_dssp HHHHHTTTCHHHHHHHHHHHHTTCCCEEEC
T ss_pred CCccCcccchHHHHHHHHHHhCCCeEEEEc
Confidence 544432 112456777778888766433
|
| >4hpn_A Putative uncharacterized protein; enolase, enzyme function initiative, EFI, structural genomic isomerase; 1.60A {Agrobacterium tumefaciens} PDB: 4ggb_A | Back alignment and structure |
|---|
Probab=81.47 E-value=25 Score=30.22 Aligned_cols=148 Identities=11% Similarity=0.072 Sum_probs=89.4
Q ss_pred HHHHHHHHHHHHHCCCCEEeCcCCcCCCcHHHHHHHHHhc--CCCCCEEEEeccCccCCCCcccccCCChHHHHHHHHHH
Q 025500 40 EEDGISMIKHAFSKGITFFDTADVYGQNANEVLLGKALKQ--LPREKIQVATKFGIAGIGVAGVIVKGAPDYVRSCCEAS 117 (252)
Q Consensus 40 ~~~~~~~l~~A~~~Gin~~Dta~~Yg~g~se~~ig~~l~~--~~R~~~~i~tK~~~~~~~~~~~~~~~~~~~i~~~~~~s 117 (252)
.++..+.+..+.+.|++.+=.--..+.....+.+ +++++ .+.-++.|=.-- .++.+...+-+ +.
T Consensus 145 ~~~~~~~~~~~~~~Gf~~~K~k~g~~~~~di~~v-~avr~~~g~~~~l~vDaN~------------~~~~~~A~~~~-~~ 210 (378)
T 4hpn_A 145 VSDNASEMAERRAEGFHACKIKIGFGVEEDLRVI-AAVREAIGPDMRLMIDANH------------GYTVTEAITLG-DR 210 (378)
T ss_dssp HHHHHHHHHHHHHTTCSEEEEECCSCHHHHHHHH-HHHHHHHTTTSEEEEECTT------------CCCHHHHHHHH-HH
T ss_pred HHHHHHHHHHHHHhccceecccccCChHHHHHHH-HHHHHhcCCcEEEEEecCc------------ccCHHHHHHHH-hh
Confidence 4556666777788899987644333210111223 34444 233334332111 24454443322 23
Q ss_pred HHHcCCCcccEEEccCCCCCCCHHHHHHHHHHHHHcCCc-cEEEccCCCHHHHHHHhhcCCceEEeeecCccccchh-hh
Q 025500 118 LKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKI-KYIGLSEASPGTIRRAHAVHPITAVQMEWSLWTRDIE-EE 195 (252)
Q Consensus 118 L~~Lg~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~G~i-r~iGvs~~~~~~l~~~~~~~~~~~~q~~~~~~~~~~~-~~ 195 (252)
|+. .++.++..|-...+ ++.+.+++++-.+ -+.|=+-++...+.++++....+++|+...-.-.-.+ ..
T Consensus 211 l~~-----~~i~~iEeP~~~~d----~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~i~~~a~d~i~~d~~~~GGit~~~~ 281 (378)
T 4hpn_A 211 AAG-----FGIDWFEEPVVPEQ----LDAYARVRAGQPIPVAGGETWHGRYGMWQALSAGAVDILQPDLCGCGGFSEIQK 281 (378)
T ss_dssp HGG-----GCCSCEECCSCTTC----HHHHHHHHHHSSSCEEECTTCCHHHHHHHHHHTTCCSEECCBTTTTTHHHHHHH
T ss_pred hhh-----cccchhhcCCCccc----hhhhHHHHhhCCceeeCCcCccchHhHHHHHHcCCCCEEeeCCeeCCChhHHHH
Confidence 444 45666777754433 6677788776554 3556667888999999988889999998876543222 78
Q ss_pred HHHHHHHhCCeEEec
Q 025500 196 IIPLCRELGIGIVPY 210 (252)
Q Consensus 196 l~~~~~~~gi~v~a~ 210 (252)
+.+.|+++|+.++..
T Consensus 282 ia~~A~~~gi~v~~h 296 (378)
T 4hpn_A 282 IATLATLHGVRIVPH 296 (378)
T ss_dssp HHHHHHHHTCEECCB
T ss_pred HHHHHHHcCCeEEeC
Confidence 999999999998644
|
| >3p0w_A Mandelate racemase/muconate lactonizing protein; structural genomics, PSI-2, protein structure initiative; HET: GKR; 1.71A {Ralstonia pickettii} PDB: 4hn8_A 3nxl_A | Back alignment and structure |
|---|
Probab=81.34 E-value=9.7 Score=34.21 Aligned_cols=157 Identities=15% Similarity=0.069 Sum_probs=90.7
Q ss_pred CHHHHHHHHHHHHH-CCCCEEeCcCCcCCCcHHHHHHHHHhc-CCCCCEEEEeccCccCCCCcccccCCChHHHHHHHHH
Q 025500 39 SEEDGISMIKHAFS-KGITFFDTADVYGQNANEVLLGKALKQ-LPREKIQVATKFGIAGIGVAGVIVKGAPDYVRSCCEA 116 (252)
Q Consensus 39 ~~~~~~~~l~~A~~-~Gin~~Dta~~Yg~g~se~~ig~~l~~-~~R~~~~i~tK~~~~~~~~~~~~~~~~~~~i~~~~~~ 116 (252)
++++..+..+.+++ .|++.|=.--...+...+...=+++++ .+ ++-|..-.-. .++.+. ..+
T Consensus 200 ~~e~~~~~a~~~~~~~Gf~~~KlKvG~~~~~~Di~rv~avRea~p--d~~L~vDaN~----------~w~~~~----Ai~ 263 (470)
T 3p0w_A 200 TPAAIARLAEAATERYGFADFKLKGGVMPGAEEMEAIAAIKARFP--HARVTLDPNG----------AWSLNE----AIA 263 (470)
T ss_dssp SHHHHHHHHHHHHHHHCCSEEEEECSSSCHHHHHHHHHHHHHHCT--TSEEEEECTT----------BBCHHH----HHH
T ss_pred CHHHHHHHHHHHHHhCCCCEEEEeCCCCCHHHHHHHHHHHHHhCC--CCeEEeeCCC----------CCCHHH----HHH
Confidence 67888888888888 699987643221111122222244554 43 3333322211 134333 334
Q ss_pred HHHHcCCCcccEEEccCCCCCCCHHHHHHHHHHHHHc-CCccEEEccCCCHHHHHHHhhcCCceEEeeecCccccchhhh
Q 025500 117 SLKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEE-GKIKYIGLSEASPGTIRRAHAVHPITAVQMEWSLWTRDIEEE 195 (252)
Q Consensus 117 sL~~Lg~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~-G~ir~iGvs~~~~~~l~~~~~~~~~~~~q~~~~~~~~~~~~~ 195 (252)
.+++|. + . +.++..|-...+.-+-++.+.+++++ +.--+.|=+-++...+.++++...++++|......--..-..
T Consensus 264 ~~~~Le-~-~-l~~iEeP~~~~d~~~~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~l~~~a~div~~d~~~GGit~a~k 340 (470)
T 3p0w_A 264 LCKGQG-H-L-VAYAEDPCGPEAGYSGREVMAEFKRATGIPTATNMIATDWRQMGHAVQLHAVDIPLADPHFWTMQGSVR 340 (470)
T ss_dssp HHTTCT-T-T-CSEEESCBCCBTTBCHHHHHHHHHHHHCCCEEESSSSCSHHHHHHHHHTTCCSEEBCCHHHHCHHHHHH
T ss_pred HHHhcc-c-c-ceeecCCCChhhccchHHHHHHHHhcCCCCEEeCCccCCHHHHHHHHHcCCCCEEEecCccCCHHHHHH
Confidence 556664 2 3 66788875443321124556666654 333455666678888888888888899998753211111277
Q ss_pred HHHHHHHhCCeEEecccCc
Q 025500 196 IIPLCRELGIGIVPYSPLG 214 (252)
Q Consensus 196 l~~~~~~~gi~v~a~spl~ 214 (252)
+...|+++|+.+...+...
T Consensus 341 ia~lA~a~gv~~~~h~~~e 359 (470)
T 3p0w_A 341 VAQLCDEWGLTWGSHSNNH 359 (470)
T ss_dssp HHHHHHHHTCCCBCCCCSC
T ss_pred HHHHHHHcCCEEEecCCcc
Confidence 8999999999987766553
|
| >1nvm_A HOA, 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling; HET: NAD; 1.70A {Pseudomonas SP} SCOP: a.5.7.1 c.1.10.5 | Back alignment and structure |
|---|
Probab=81.34 E-value=4.4 Score=34.79 Aligned_cols=105 Identities=17% Similarity=0.199 Sum_probs=60.4
Q ss_pred CCChHHHHHHHHHHHHHcCCCcccEE-----EccCCCCCCCHHHHHHHHHHHHHc-CCccEEEcc---CCCHHHHHHHhh
Q 025500 104 KGAPDYVRSCCEASLKRLDVDYIDLY-----YQHRVDTSVPIEETIGEMKKLVEE-GKIKYIGLS---EASPGTIRRAHA 174 (252)
Q Consensus 104 ~~~~~~i~~~~~~sL~~Lg~d~iDl~-----~lh~~~~~~~~~~~~~~L~~l~~~-G~ir~iGvs---~~~~~~l~~~~~ 174 (252)
..+.+... .+-+.|.++|+++|.+- -.-.|+......+.|+.++++++. ..++...+. ....+.++++.+
T Consensus 26 ~~~~e~k~-~i~~~L~~~Gvd~IEvG~~~g~p~ssp~~g~~~~~~~e~l~~i~~~~~~~~i~~l~~p~~~~~~~i~~a~~ 104 (345)
T 1nvm_A 26 QYTLDDVR-AIARALDKAKVDSIEVAHGDGLQGSSFNYGFGRHTDLEYIEAVAGEISHAQIATLLLPGIGSVHDLKNAYQ 104 (345)
T ss_dssp CCCHHHHH-HHHHHHHHHTCSEEECSCTTSTTCCBTTTBCCSSCHHHHHHHHHTTCSSSEEEEEECBTTBCHHHHHHHHH
T ss_pred CCCHHHHH-HHHHHHHHcCCCEEEEecCCCCCCCCCcccCCCCCHHHHHHHHHhhCCCCEEEEEecCCcccHHHHHHHHh
Confidence 34555544 45566788999888883 222222111223457777777665 345555552 224667777766
Q ss_pred cCCceEEeeecCccccchhhhHHHHHHHhCCeEEec
Q 025500 175 VHPITAVQMEWSLWTRDIEEEIIPLCRELGIGIVPY 210 (252)
Q Consensus 175 ~~~~~~~q~~~~~~~~~~~~~l~~~~~~~gi~v~a~ 210 (252)
. ..+.+.+..++-+.+...+.+++|+++|+.+..+
T Consensus 105 a-Gvd~v~I~~~~s~~~~~~~~i~~ak~~G~~v~~~ 139 (345)
T 1nvm_A 105 A-GARVVRVATHCTEADVSKQHIEYARNLGMDTVGF 139 (345)
T ss_dssp H-TCCEEEEEEETTCGGGGHHHHHHHHHHTCEEEEE
T ss_pred C-CcCEEEEEEeccHHHHHHHHHHHHHHCCCEEEEE
Confidence 4 3344444333322222378999999999988766
|
| >3mzn_A Glucarate dehydratase; lyase, structural genomics, protein structure initiative, PS nysgrc; 1.85A {Chromohalobacter salexigens} PDB: 3nfu_A | Back alignment and structure |
|---|
Probab=80.46 E-value=10 Score=33.80 Aligned_cols=157 Identities=15% Similarity=0.109 Sum_probs=89.6
Q ss_pred CHHHHHHHHHHHHH-CCCCEEeCcCCcCCCcHHHHHHHHHhc-CCCCCEEEEeccCccCCCCcccccCCChHHHHHHHHH
Q 025500 39 SEEDGISMIKHAFS-KGITFFDTADVYGQNANEVLLGKALKQ-LPREKIQVATKFGIAGIGVAGVIVKGAPDYVRSCCEA 116 (252)
Q Consensus 39 ~~~~~~~~l~~A~~-~Gin~~Dta~~Yg~g~se~~ig~~l~~-~~R~~~~i~tK~~~~~~~~~~~~~~~~~~~i~~~~~~ 116 (252)
++++..+..+.+++ .|++.|=.--...+...+...=+++++ .+ ++.|..-.-. .++.+.. .+
T Consensus 182 ~~e~~~~~a~~~~~~~Gf~~~KlKvG~~~~~~Di~~v~avRea~p--d~~L~vDaN~----------~w~~~~A----~~ 245 (450)
T 3mzn_A 182 TPEAVANLARAAYDRYGFKDFKLKGGVLRGEEEADCIRALHEAFP--EARLALDPNG----------AWKLDEA----VR 245 (450)
T ss_dssp SHHHHHHHHHHHHHHHCCSEEEEECSSSCHHHHHHHHHHHHHHCT--TSEEEEECTT----------CBCHHHH----HH
T ss_pred CHHHHHHHHHHHHHhCCCCEEEECCCCCCHHHHHHHHHHHHHhCC--CCeEEEECCC----------CCCHHHH----HH
Confidence 67888888888887 599987643211111122222245554 43 3333322211 1344332 24
Q ss_pred HHHHcCCCcccEEEccCCCCCCCHHHHHHHHHHHHHc-CCccEEEccCCCHHHHHHHhhcCCceEEeeecCccccchhhh
Q 025500 117 SLKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEE-GKIKYIGLSEASPGTIRRAHAVHPITAVQMEWSLWTRDIEEE 195 (252)
Q Consensus 117 sL~~Lg~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~-G~ir~iGvs~~~~~~l~~~~~~~~~~~~q~~~~~~~~~~~~~ 195 (252)
.++.|. .. +.++..|-...+.-+-++.+.+++++ +.--+.|-+.++...+.++++...++++|......--..-..
T Consensus 246 ~~~~L~--~~-i~~iEeP~~~~d~~~~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~a~di~~~d~~~GGit~a~k 322 (450)
T 3mzn_A 246 VLEPIK--HL-LSYAEDPCGQEGGFSGRETMAEFKKRTGLPTATNMIATDYKQLQYAVQLNSVDIPLADCHFWTMQGAVA 322 (450)
T ss_dssp HHGGGG--GG-CSEEESSBCCBTTBCHHHHHHHHHHHHCCCEEESSSSSSHHHHHHHHHHTCCSEEBCCHHHHCHHHHHH
T ss_pred HHHHhh--hc-cceeeCCCCcccccchHHHHHHHHHhcCCCEEeCCccCCHHHHHHHHHcCCCCEEEecCccCCHHHHHH
Confidence 455553 23 66777775443321124556666654 333455666678888888888788889988753211111277
Q ss_pred HHHHHHHhCCeEEecccCc
Q 025500 196 IIPLCRELGIGIVPYSPLG 214 (252)
Q Consensus 196 l~~~~~~~gi~v~a~spl~ 214 (252)
+.+.|+++|+.+...+...
T Consensus 323 ia~lA~a~gv~~~~h~~~~ 341 (450)
T 3mzn_A 323 VGELCNEWGMTWGSHSNNH 341 (450)
T ss_dssp HHHHHHHTTCCCBCCCCSC
T ss_pred HHHHHHHcCCEEEecCCcc
Confidence 9999999999987766543
|
| >4h83_A Mandelate racemase/muconate lactonizing enzyme; structural genomics, enzyme function initiative; 2.09A {Marine actinobacterium PHSC20C1} PDB: 3no1_A 3msy_A | Back alignment and structure |
|---|
Probab=80.18 E-value=22 Score=30.88 Aligned_cols=152 Identities=9% Similarity=0.004 Sum_probs=88.6
Q ss_pred HHHHHHHHHHHHHCCCCEEeCcCCcCCCcHHHHHHHHHhcCCCCCEEEEeccCccCCCCcccccCCChHHHHHHHHHHHH
Q 025500 40 EEDGISMIKHAFSKGITFFDTADVYGQNANEVLLGKALKQLPREKIQVATKFGIAGIGVAGVIVKGAPDYVRSCCEASLK 119 (252)
Q Consensus 40 ~~~~~~~l~~A~~~Gin~~Dta~~Yg~g~se~~ig~~l~~~~R~~~~i~tK~~~~~~~~~~~~~~~~~~~i~~~~~~sL~ 119 (252)
.++..+.++.+.+.|++.|=.--...+...+...=+++++.-.+++.|..-... .++.+... +.++
T Consensus 165 ~~~~~~~~~~~~~~G~~~~Kikvg~~~~~~d~~~v~avR~~~G~~~~l~vDaN~----------~~~~~~A~----~~~~ 230 (388)
T 4h83_A 165 LGSIADEMHNYQELGLAGVKFKVGGLSAAEDAARITAAREAAGDDFIICIDANQ----------GYKPAVAV----DLSR 230 (388)
T ss_dssp TCSHHHHHHHHHHHTBSEEEEECSSSCHHHHHHHHHHHHHHHCSSSEEEEECTT----------CBCHHHHH----HHHH
T ss_pred HHHHHHHHHHHHHcCCceEeecCCCCCHHHHHHHHHHHHHhcCCCeEEEEecCc----------CCCHHHHH----HHHH
Confidence 455666778888999998764321111011111223444411223333222211 13444333 3344
Q ss_pred HcCCCcccEEEccCCCCCCCHHHHHHHHHHHHHcCCc-cEEEccCCCHHHHHHHhhcCCceEEeeecCccccchh-hhHH
Q 025500 120 RLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKI-KYIGLSEASPGTIRRAHAVHPITAVQMEWSLWTRDIE-EEII 197 (252)
Q Consensus 120 ~Lg~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~G~i-r~iGvs~~~~~~l~~~~~~~~~~~~q~~~~~~~~~~~-~~l~ 197 (252)
+| +..++.++..|-.. .+.++.+.+++++..+ -+.|=|-++...+.++++...++++|+...-.-.-.+ ..+.
T Consensus 231 ~l--~~~~~~~iEeP~~~---~~d~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~i~~~a~d~i~~d~~~~GGit~~~kia 305 (388)
T 4h83_A 231 RI--ADLNIRWFEEPVEW---HNDKRSMRDVRYQGSVPVCAGQTEFSASGCRDLMETGAIDVCNFDSSWSGGPTAWLRTA 305 (388)
T ss_dssp HT--TTSCCCCEESCBCS---TTHHHHHHHHHHHSSSCEEECTTCSSHHHHHHHHHHTCCSEECCCGGGTTCHHHHHHHH
T ss_pred Hh--hhcCcceeecCccc---ccchHHHHHHHhhcCCCccCCccccChHhHHHHHHcCCCCeEeecceeCCCHHHHHHHH
Confidence 44 23566677776432 1346677777777654 4556677899999999988889999998766533222 6788
Q ss_pred HHHHHhCCeEEec
Q 025500 198 PLCRELGIGIVPY 210 (252)
Q Consensus 198 ~~~~~~gi~v~a~ 210 (252)
+.|+.+|+.|..+
T Consensus 306 ~~A~~~gv~v~~h 318 (388)
T 4h83_A 306 AIATSYDVQMGHH 318 (388)
T ss_dssp HHHHHTTCEECCC
T ss_pred HHHHHCCCEEEec
Confidence 9999999987544
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| 252 | ||||
| d1pyfa_ | 311 | c.1.7.1 (A:) Putative oxidoreductase IolS {Bacillu | 4e-49 | |
| d1lqaa_ | 346 | c.1.7.1 (A:) Tas protein {Escherichia coli [TaxId: | 1e-48 | |
| d3eaua1 | 326 | c.1.7.1 (A:36-361) Voltage-dependent K+ channel be | 2e-43 | |
| d1s1pa_ | 315 | c.1.7.1 (A:) Prostaglandin d2 11-ketoreductase (ak | 1e-37 | |
| d1pz1a_ | 333 | c.1.7.1 (A:) Putative oxidoreductase YhdN {Bacillu | 2e-36 | |
| d1afsa_ | 319 | c.1.7.1 (A:) 3-alpha-hydroxysteroid dehydrogenase | 2e-35 | |
| d1us0a_ | 314 | c.1.7.1 (A:) Aldose reductase (aldehyde reductase) | 8e-35 | |
| d1qwka_ | 312 | c.1.7.1 (A:) Hypothetical protein C07D8.6 {Nematod | 9e-35 | |
| d1hqta_ | 324 | c.1.7.1 (A:) Aldose reductase (aldehyde reductase) | 3e-34 | |
| d1mi3a_ | 319 | c.1.7.1 (A:) Xylose reductase {Fungi (Candida tenu | 2e-33 | |
| d1vp5a_ | 284 | c.1.7.1 (A:) 2,5-diketo-D-gluconic acid reductase | 2e-32 | |
| d1mzra_ | 274 | c.1.7.1 (A:) 2,5-diketo-D-gluconic acid reductase | 1e-30 | |
| d1frba_ | 315 | c.1.7.1 (A:) FR-1 (fibroblast growth factor-induce | 2e-30 | |
| d1ur3m_ | 298 | c.1.7.1 (M:) Hypothetical oxidoreductase YdhF {Esc | 9e-28 | |
| d1gvea_ | 324 | c.1.7.1 (A:) Aflatoxin aldehyde reductase (akr7a1) | 6e-27 | |
| d1hw6a_ | 262 | c.1.7.1 (A:) 2,5-diketo-D-gluconic acid reductase | 1e-24 |
| >d1pyfa_ c.1.7.1 (A:) Putative oxidoreductase IolS {Bacillus subtilis [TaxId: 1423]} Length = 311 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: NAD(P)-linked oxidoreductase family: Aldo-keto reductases (NADP) domain: Putative oxidoreductase IolS species: Bacillus subtilis [TaxId: 1423]
Score = 162 bits (409), Expect = 4e-49
Identities = 70/224 (31%), Positives = 112/224 (50%), Gaps = 2/224 (0%)
Query: 10 RVKLGTQGLEVSKLGYGCMNLSG-GYSSPVSEEDGISMIKHAFSKGITFFDTADVYGQNA 68
+ KLG L+V +G G + G ++EE G +++ A G+T DTA +YG
Sbjct: 2 KAKLGKSDLQVFPIGLGTNAVGGHNLYPNLNEETGKELVREAIRNGVTMLDTAYIYGIGR 61
Query: 69 NEVLLGKALKQLPREKIQVATKFGIAGIGVAGVIVKGAPDYVRSCCEASLKRLDVDYIDL 128
+E L+G+ L++ RE + +ATK G V +S E SLKRL+ DYIDL
Sbjct: 62 SEELIGEVLREFNREDVVIATKAAHRKQGNDFVFDNSPDFLKKSVDE-SLKRLNTDYIDL 120
Query: 129 YYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPGTIRRAHAVHPITAVQMEWSLW 188
+Y H D P +E + + ++ + GKI+ IG+S S ++ A+ + +Q E++L
Sbjct: 121 FYIHFPDEHTPKDEAVNALNEMKKAGKIRSIGVSNFSLEQLKEANKDGLVDVLQGEYNLL 180
Query: 189 TRDIEEEIIPLCRELGIGIVPYSPLGRGFFGGKAVVENVPADSF 232
R+ E+ P +E I +PY PL G GK + +
Sbjct: 181 NREAEKTFFPYTKEHNISFIPYFPLVSGLLAGKYTEDTTFPEGD 224
|
| >d1lqaa_ c.1.7.1 (A:) Tas protein {Escherichia coli [TaxId: 562]} Length = 346 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: NAD(P)-linked oxidoreductase family: Aldo-keto reductases (NADP) domain: Tas protein species: Escherichia coli [TaxId: 562]
Score = 161 bits (408), Expect = 1e-48
Identities = 59/269 (21%), Positives = 95/269 (35%), Gaps = 38/269 (14%)
Query: 11 VKLGTQGLEVSKLGYGCMNLSGGYSSPVSEEDGISMIKHAFSKGITFFDTADVYGQNANE 70
++ LEVS LG G M SE D + + +A ++GI D A++Y
Sbjct: 4 HRIPHSSLEVSTLGLGTMTFGE----QNSEADAHAQLDYAVAQGINLIDVAEMYPVPPRP 59
Query: 71 VLLGKALKQLPREKIQVATKFGIAGIGVAGVIVKGA-----------PDYVRSCCEASLK 119
G + + ++ + + +R SLK
Sbjct: 60 ETQGLTETYVGNWLAKHGSREKLIIASKVSGPSRNNDKGIRPDQALDRKNIREALHDSLK 119
Query: 120 RLDVDYIDLYYQHRVDTSVPI-----------------EETIGEMKKLVEEGKIKYIGLS 162
RL DY+DLY H +T+ + + GKI+YIG+S
Sbjct: 120 RLQTDYLDLYQVHWPQRPTNCFGKLGYSWTDSAPAVSLLDTLDALAEYQRAGKIRYIGVS 179
Query: 163 EASPGTIRRA------HAVHPITAVQMEWSLWTRDIEEEIIPLCRELGIGIVPYSPLGRG 216
+ + R H + I +Q +SL R E + + + G+ ++ YS LG G
Sbjct: 180 NETAFGVMRYLHLADKHDLPRIVTIQNPYSLLNRSFEVGLAEVSQYEGVELLAYSCLGFG 239
Query: 217 FFGGKAVVENVPADSFLVLFSVNVYPHHF 245
GK + PA + LFS
Sbjct: 240 TLTGKYLNGAKPAGARNTLFSRFTRYSGE 268
|
| >d3eaua1 c.1.7.1 (A:36-361) Voltage-dependent K+ channel beta subunit {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 326 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: NAD(P)-linked oxidoreductase family: Aldo-keto reductases (NADP) domain: Voltage-dependent K+ channel beta subunit species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 147 bits (371), Expect = 2e-43
Identities = 63/217 (29%), Positives = 105/217 (48%), Gaps = 10/217 (4%)
Query: 12 KLGTQGLEVSKLGYGCMNLSGGYSSPVSEEDGISMIKHAFSKGITFFDTADVYGQNANEV 71
LG GL VS LG G GG +++E ++ A+ GI FDTA+VY EV
Sbjct: 6 NLGKSGLRVSCLGLGTWVTFGG---QITDEMAEHLMTLAYDNGINLFDTAEVYAAGKAEV 62
Query: 72 LLGKALKQLPREKIQVATKFGIAGIGVAGVIVKGAPDYVRSCCEASLKRLDVDYIDLYYQ 131
+LG +K+ + + I G A + ++ +ASL+RL ++Y+D+ +
Sbjct: 63 VLGNIIKKKGWRRSSLVITTKIFWGGKAETERGLSRKHIIEGLKASLERLQLEYVDVVFA 122
Query: 132 HRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPGTIRR------AHAVHPITAVQMEW 185
+R D + P+EET+ M ++ +G Y G S S I + P Q E+
Sbjct: 123 NRPDPNTPMEETVRAMTHVINQGMAMYWGTSRWSSMEIMEAYSVARQFNLIPPICEQAEY 182
Query: 186 SLWTRD-IEEEIIPLCRELGIGIVPYSPLGRGFFGGK 221
++ R+ +E ++ L ++G+G + +SPL G GK
Sbjct: 183 HMFQREKVEVQLPELFHKIGVGAMTWSPLACGIVSGK 219
|
| >d1s1pa_ c.1.7.1 (A:) Prostaglandin d2 11-ketoreductase (akr1c3) {Human (Homo sapiens) [TaxId: 9606]} Length = 315 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: NAD(P)-linked oxidoreductase family: Aldo-keto reductases (NADP) domain: Prostaglandin d2 11-ketoreductase (akr1c3) species: Human (Homo sapiens) [TaxId: 9606]
Score = 131 bits (331), Expect = 1e-37
Identities = 48/234 (20%), Positives = 75/234 (32%), Gaps = 33/234 (14%)
Query: 10 RVKLGTQGLEVSKLGYGCMNLSGGYSSPVSEEDGISMIKHAFSKGITFFDTADVYGQNAN 69
VKL G + LG+G V + + K A G D+A +Y N
Sbjct: 2 CVKLND-GHFMPVLGFGTYAPPE-----VPRSKALEVTKLAIEAGFRHIDSAHLYN---N 52
Query: 70 EVLLGKALKQLPREKIQVATKFGIAGIGVAGVIVKGAPDYVRSCCEASLKRLDVDYIDLY 129
E +G A++ + P+ VR E SLK+ +DY+DLY
Sbjct: 53 EEQVGLAIRSKIADGSVKREDIFYTSK---LWSTFHRPELVRPALENSLKKAQLDYVDLY 109
Query: 130 YQHRVDTSVP-------------------IEETIGEMKKLVEEGKIKYIGLSEASPGTIR 170
H + P + T M+K + G K IG+S + +
Sbjct: 110 LIHSPMSLKPGEELSPTDENGKVIFDIVDLCTTWEAMEKCKDAGLAKSIGVSNFNRRQLE 169
Query: 171 RA--HAVHPITAVQMEWSLWTRDIEEEIIPLCRELGIGIVPYSPLGRGFFGGKA 222
V + +++ C+ I +V YS LG
Sbjct: 170 MILNKPGLKYKPVCNQVECHPYFNRSKLLDFCKSKDIVLVAYSALGSQRDKRWV 223
|
| >d1pz1a_ c.1.7.1 (A:) Putative oxidoreductase YhdN {Bacillus subtilis [TaxId: 1423]} Length = 333 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: NAD(P)-linked oxidoreductase family: Aldo-keto reductases (NADP) domain: Putative oxidoreductase YhdN species: Bacillus subtilis [TaxId: 1423]
Score = 129 bits (325), Expect = 2e-36
Identities = 68/210 (32%), Positives = 102/210 (48%)
Query: 11 VKLGTQGLEVSKLGYGCMNLSGGYSSPVSEEDGISMIKHAFSKGITFFDTADVYGQNANE 70
+ G+E S++G G + G E+ I I+ A +GIT DTA YG +E
Sbjct: 4 TSIADTGIEASRIGLGTWAIGGTMWGGTDEKTSIETIRAALDQGITLIDTAPAYGFGQSE 63
Query: 71 VLLGKALKQLPREKIQVATKFGIAGIGVAGVIVKGAPDYVRSCCEASLKRLDVDYIDLYY 130
++GKA+K+ + + + + E SLKRL DYIDLY
Sbjct: 64 EIVGKAIKEYMKRDQVILATKTALDWKNNQLFRHANRARIVEEVENSLKRLQTDYIDLYQ 123
Query: 131 QHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPGTIRRAHAVHPITAVQMEWSLWTR 190
H D VPIEET MK+L + GKI+ IG+S S + AV P+ +Q ++L+ R
Sbjct: 124 VHWPDPLVPIEETAEVMKELYDAGKIRAIGVSNFSIEQMDTFRAVAPLHTIQPPYNLFER 183
Query: 191 DIEEEIIPLCRELGIGIVPYSPLGRGFFGG 220
++EE ++P ++ I + Y L RG G
Sbjct: 184 EMEESVLPYAKDNKITTLLYGSLCRGLLTG 213
|
| >d1afsa_ c.1.7.1 (A:) 3-alpha-hydroxysteroid dehydrogenase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 319 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: NAD(P)-linked oxidoreductase family: Aldo-keto reductases (NADP) domain: 3-alpha-hydroxysteroid dehydrogenase species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 126 bits (317), Expect = 2e-35
Identities = 50/235 (21%), Positives = 83/235 (35%), Gaps = 33/235 (14%)
Query: 9 PRVKLGTQGLEVSKLGYGCMNLSGGYSSPVSEEDGISMIKHAFSKGITFFDTADVYGQNA 68
RV L G + LG+G V++++ I K A G FD+A +Y
Sbjct: 6 LRVALND-GNFIPVLGFGTT-----VPEKVAKDEVIKATKIAIDNGFRHFDSAYLYE--- 56
Query: 69 NEVLLGKALKQLPREKIQVATKFGIAGIGVAGVIVKGAPDYVRSCCEASLKRLDVDYIDL 128
E +G+A++ + P+ VR+C E +LK +DY+DL
Sbjct: 57 VEEEVGQAIRSKIEDGTVKREDI---FYTSKLWSTFHRPELVRTCLEKTLKSTQLDYVDL 113
Query: 129 YYQHR-------------------VDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPGTI 169
Y H + +V I +T M+K + G K IG+S + +
Sbjct: 114 YIIHFPMALQPGDIFFPRDEHGKLLFETVDICDTWEAMEKCKDAGLAKSIGVSNFNCRQL 173
Query: 170 RRA--HAVHPITAVQMEWSLWTRDIEEEIIPLCRELGIGIVPYSPLGRGFFGGKA 222
R V + + +++ C+ I +V Y LG
Sbjct: 174 ERILNKPGLKYKPVCNQVECHLYLNQSKMLDYCKSKDIILVSYCTLGSSRDKTWV 228
|
| >d1us0a_ c.1.7.1 (A:) Aldose reductase (aldehyde reductase) {Human (Homo sapiens) [TaxId: 9606]} Length = 314 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: NAD(P)-linked oxidoreductase family: Aldo-keto reductases (NADP) domain: Aldose reductase (aldehyde reductase) species: Human (Homo sapiens) [TaxId: 9606]
Score = 124 bits (312), Expect = 8e-35
Identities = 52/234 (22%), Positives = 82/234 (35%), Gaps = 36/234 (15%)
Query: 9 PRVKLGTQGLEVSKLGYGCMNLSGGYSSPVSEEDGISMIKHAFSKGITFFDTADVYGQNA 68
R+ L G ++ LG G +K A G D A VY
Sbjct: 3 SRILLNN-GAKMPILGLGTWKSP--------PGQVTEAVKVAIDVGYRHIDCAHVYQ--- 50
Query: 69 NEVLLGKALKQLPREKIQVATKFGIAGIGVAGVIVKGAPDYVRSCCEASLKRLDVDYIDL 128
NE +G A+++ RE++ + I V+ C+ +L L +DY+DL
Sbjct: 51 NENEVGVAIQEKLREQVVKREELFIVSKLWCTYHE---KGLVKGACQKTLSDLKLDYLDL 107
Query: 129 YYQHRVDTSVP-------------------IEETIGEMKKLVEEGKIKYIGLSEASPGTI 169
Y H P I +T M++LV+EG +K IG+S + +
Sbjct: 108 YLIHWPTGFKPGKEFFPLDESGNVVPSDTNILDTWAAMEELVDEGLVKAIGISNFNHLQV 167
Query: 170 RRA--HAVHPITAVQMEWSLWTRDIEEEIIPLCRELGIGIVPYSPLGRGFFGGK 221
+ +E++I C+ GI + YSPLG
Sbjct: 168 EMILNKPGLKYKPAVNQIECHPYLTQEKLIQYCQSKGIVVTAYSPLGSPDRPWA 221
|
| >d1qwka_ c.1.7.1 (A:) Hypothetical protein C07D8.6 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 312 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: NAD(P)-linked oxidoreductase family: Aldo-keto reductases (NADP) domain: Hypothetical protein C07D8.6 species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Score = 124 bits (312), Expect = 9e-35
Identities = 51/223 (22%), Positives = 87/223 (39%), Gaps = 24/223 (10%)
Query: 9 PRVKLGTQGLEVSKLGYGCMNLSGGYSSPVSEEDGISMIKHAFSKGITFFDTADVYGQNA 68
+KL G+E+ +G G S + I+ +K A G DTA VY
Sbjct: 2 ASIKLSN-GVEMPVIGLGTWQSS--------PAEVITAVKTAVKAGYRLIDTASVYQ--- 49
Query: 69 NEVLLGKALKQLPREKIQVATKFGIAGIGVAGVIVKGAPDYVRSCCEASLKRLDVDYIDL 128
NE +G A+K+L E + + I + AP + SLK+L ++Y+DL
Sbjct: 50 NEEAIGTAIKELLEEGVVKREELFITTKAW---THELAPGKLEGGLRESLKKLQLEYVDL 106
Query: 129 YYQHRVD---------TSVPIEETIGEMKKLVEEGKIKYIGLSEASPGTIRRAHAVHPIT 179
Y H + P+E+ + + + G K +G+S + I RA A+
Sbjct: 107 YLAHMPAAFNDDMSEHIASPVEDVWRQFDAVYKAGLAKAVGVSNWNNDQISRALALGLTP 166
Query: 180 AVQMEWSLWTRDIEEEIIPLCRELGIGIVPYSPLGRGFFGGKA 222
+ L + + + C++ I + Y+ LG
Sbjct: 167 VHNSQVELHLYFPQHDHVDFCKKHNISVTSYATLGSPGRVNFT 209
|
| >d1hqta_ c.1.7.1 (A:) Aldose reductase (aldehyde reductase) {Pig (Sus scrofa) [TaxId: 9823]} Length = 324 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: NAD(P)-linked oxidoreductase family: Aldo-keto reductases (NADP) domain: Aldose reductase (aldehyde reductase) species: Pig (Sus scrofa) [TaxId: 9823]
Score = 123 bits (309), Expect = 3e-34
Identities = 47/229 (20%), Positives = 85/229 (37%), Gaps = 33/229 (14%)
Query: 11 VKLGTQGLEVSKLGYGCMNLSGGYSSPVSEEDGISMIKHAFSKGITFFDTADVYGQNANE 70
V L T G ++ +G G + IK+A + G D A ++G NE
Sbjct: 5 VLLHT-GQKMPLIGLGTWKSE--------PGQVKAAIKYALTVGYRHIDCAAIFG---NE 52
Query: 71 VLLGKALKQLPREKIQVATKFGIAGIGVAGVIVKGAPDYVRSCCEASLKRLDVDYIDLYY 130
+ +G+AL++ V + + P+ V +L L ++Y+DLY
Sbjct: 53 LEIGEALQETVGPGKAVPREELFVTSKLWNTKHH--PEDVEPALRKTLADLQLEYLDLYL 110
Query: 131 QHRVDT-------------------SVPIEETIGEMKKLVEEGKIKYIGLSEASPGTIRR 171
H + ++T ++ LV +G ++ +GLS S I
Sbjct: 111 MHWPYAFERGDNPFPKNADGTIRYDATHYKDTWKALEALVAKGLVRALGLSNFSSRQIDD 170
Query: 172 AHAVHPITAVQMEWSLWTRDIEEEIIPLCRELGIGIVPYSPLGRGFFGG 220
+V + ++ + E+I C+ G+ + YSPLG
Sbjct: 171 VLSVASVRPAVLQVECHPYLAQNELIAHCQARGLEVTAYSPLGSSDRAW 219
|
| >d1mi3a_ c.1.7.1 (A:) Xylose reductase {Fungi (Candida tenuis) [TaxId: 45596]} Length = 319 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: NAD(P)-linked oxidoreductase family: Aldo-keto reductases (NADP) domain: Xylose reductase species: Fungi (Candida tenuis) [TaxId: 45596]
Score = 121 bits (303), Expect = 2e-33
Identities = 54/239 (22%), Positives = 85/239 (35%), Gaps = 40/239 (16%)
Query: 8 VPRVKLGTQGLEVSKLGYGCMNLSGGYSSPVSEEDGISMIKHAFSKGITFFDTADVYGQN 67
+P +KL + G + +G+GC L+ + A G FD A+ YG
Sbjct: 2 IPDIKLSS-GHLMPSIGFGCWKLA--------NATAGEQVYQAIKAGYRLFDGAEDYG-- 50
Query: 68 ANEVLLGKALKQLPREKIQVATKFGIAGIGVAGVIVKGAPDYVRSCCEASLKRLDVDYID 127
NE +G +K+ E + + + P V + +L L VDY+D
Sbjct: 51 -NEKEVGDGVKRAIDEGLVKREEI---FLTSKLWNNYHDPKNVETALNKTLADLKVDYVD 106
Query: 128 LYYQH-------------------------RVDTSVPIEETIGEMKKLVEEGKIKYIGLS 162
L+ H V VPI ET ++KLV GKIK IG+S
Sbjct: 107 LFLIHFPIAFKFVPIEEKYPPGFYCGDGNNFVYEDVPILETWKALEKLVAAGKIKSIGVS 166
Query: 163 EASPGTIRRAHAVHPITAVQMEWSLWTRDIEEEIIPLCRELGIGIVPYSPLGRGFFGGK 221
+ I ++ + ++I ++ G+ I YS G F
Sbjct: 167 NFPGALLLDLLRGATIKPAVLQVEHHPYLQQPKLIEFAQKAGVTITAYSSFGPQSFVEM 225
|
| >d1vp5a_ c.1.7.1 (A:) 2,5-diketo-D-gluconic acid reductase A {Thermotoga maritima [TaxId: 2336]} Length = 284 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: NAD(P)-linked oxidoreductase family: Aldo-keto reductases (NADP) domain: 2,5-diketo-D-gluconic acid reductase A species: Thermotoga maritima [TaxId: 2336]
Score = 117 bits (294), Expect = 2e-32
Identities = 49/206 (23%), Positives = 81/206 (39%), Gaps = 17/206 (8%)
Query: 7 QVPRVKLGTQGLEVSKLGYGCMNLSGGYSSPVSEEDGISMIKHAFSKGITFFDTADVYGQ 66
QVP+V L G+E+ LGYG + E + A G DTA Y
Sbjct: 1 QVPKVTLNN-GVEMPILGYGVFQIP--------PEKTEECVYEAIKVGYRLIDTAASYM- 50
Query: 67 NANEVLLGKALKQLPREKIQVATKFGIAGIGVAGVIVKGAPDYVRSCCEASLKRLDVDYI 126
NE +G+A+K+ E I + + + + + E SLK+L ++YI
Sbjct: 51 --NEEGVGRAIKRAIDEGIVRREELFVTTKLWVSDV---GYESTKKAFEKSLKKLQLEYI 105
Query: 127 DLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPGTIRRAHAVHPITAVQMEWS 186
DLY H+ + M+++ ++G ++ IG+S P + H I +
Sbjct: 106 DLYLIHQPFG--DVHCAWKAMEEMYKDGLVRAIGVSNFYPDRLMDLMVHHEIVPAVNQIE 163
Query: 187 LWTRDIEEEIIPLCRELGIGIVPYSP 212
+ +E I R I + P
Sbjct: 164 IHPFYQRQEEIEFMRNYNIQPEAWGP 189
|
| >d1mzra_ c.1.7.1 (A:) 2,5-diketo-D-gluconic acid reductase A {Escherichia coli [TaxId: 562]} Length = 274 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: NAD(P)-linked oxidoreductase family: Aldo-keto reductases (NADP) domain: 2,5-diketo-D-gluconic acid reductase A species: Escherichia coli [TaxId: 562]
Score = 112 bits (281), Expect = 1e-30
Identities = 52/212 (24%), Positives = 80/212 (37%), Gaps = 22/212 (10%)
Query: 9 PRVKLGTQGLEVSKLGYGCMNLSGGYSSPVSEEDGISMIKHAFSKGITFFDTADVYGQNA 68
+KL G + +LG G S E+ I+ I+ A G DTA Y
Sbjct: 4 TVIKLQD-GNVMPQLGLGVWQAS--------NEEVITAIQKALEVGYRSIDTAAAYK--- 51
Query: 69 NEVLLGKALKQLPREKIQVATKFGIAGIGVAGVIVKGAPDYVRSCCEASLKRLDVDYIDL 128
NE +GKALK + ++ + R SLK+L +DYIDL
Sbjct: 52 NEEGVGKALKNASVNREELFITT---------KLWNDDHKRPREALLDSLKKLQLDYIDL 102
Query: 129 YYQHRVDTSVPIEETIGEMK-KLVEEGKIKYIGLSEASPGTIRRAHAVHPITAVQMEWSL 187
Y H ++ + +L +EG IK IG+ ++R +T V + L
Sbjct: 103 YLMHWPVPAIDHYVEAWKGMIELQKEGLIKSIGVCNFQIHHLQRLIDETGVTPVINQIEL 162
Query: 188 WTRDIEEEIIPLCRELGIGIVPYSPLGRGFFG 219
+ ++ I +SPL +G G
Sbjct: 163 HPLMQQRQLHAWNATHKIQTESWSPLAQGGKG 194
|
| >d1frba_ c.1.7.1 (A:) FR-1 (fibroblast growth factor-induced) protein {Mouse (Mus musculus) [TaxId: 10090]} Length = 315 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: NAD(P)-linked oxidoreductase family: Aldo-keto reductases (NADP) domain: FR-1 (fibroblast growth factor-induced) protein species: Mouse (Mus musculus) [TaxId: 10090]
Score = 113 bits (282), Expect = 2e-30
Identities = 48/229 (20%), Positives = 78/229 (34%), Gaps = 36/229 (15%)
Query: 11 VKLGTQGLEVSKLGYGCMNLSGGYSSPVSEEDGISMIKHAFSKGITFFDTADVYGQNANE 70
V+L T ++ +G G +K A G D A Y NE
Sbjct: 4 VELST-KAKMPIVGLGTWKSP--------PNQVKEAVKAAIDAGYRHIDCAYAYC---NE 51
Query: 71 VLLGKALKQLPREKIQVATKFGIAGIGVAGVIVKGAPDYVRSCCEASLKRLDVDYIDLYY 130
+G+A+++ +EK I ++ + +L L +DY+DLY
Sbjct: 52 NEVGEAIQEKIKEKAVQREDLFIVSKLWPTCFE---KKLLKEAFQKTLTDLKLDYLDLYL 108
Query: 131 QHRVDTSVP-------------------IEETIGEMKKLVEEGKIKYIGLSEASPGTIRR 171
H P E M++LV++G +K +G+S + I R
Sbjct: 109 IHWPQGLQPGKELFPKDDQGRILTSKTTFLEAWEGMEELVDQGLVKALGVSNFNHFQIER 168
Query: 172 --AHAVHPITAVQMEWSLWTRDIEEEIIPLCRELGIGIVPYSPLGRGFF 218
V + +E++I C GI + YSPLG
Sbjct: 169 LLNKPGLKHKPVTNQVECHPYLTQEKLIQYCHSKGISVTAYSPLGSPDR 217
|
| >d1ur3m_ c.1.7.1 (M:) Hypothetical oxidoreductase YdhF {Escherichia coli [TaxId: 562]} Length = 298 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: NAD(P)-linked oxidoreductase family: Aldo-keto reductases (NADP) domain: Hypothetical oxidoreductase YdhF species: Escherichia coli [TaxId: 562]
Score = 105 bits (262), Expect = 9e-28
Identities = 55/213 (25%), Positives = 95/213 (44%), Gaps = 11/213 (5%)
Query: 8 VPRVKLGTQGLEVSKLGYGCMNLSGGYSSPVSEEDGISMIKHAFSKGITFFDTADVYGQN 67
V R+ + QG E S+ G L +S +S I+ G+T D AD+YG
Sbjct: 2 VQRITIAPQGPEFSRFVMGYWRLMDWN---MSARQLVSFIEEHLDLGVTTVDHADIYGGY 58
Query: 68 ANEVLLGKALKQLP--REKIQVATKFGIAGIGVAGVIVKGA---PDYVRSCCEASLKRLD 122
E G+ALK P RE++++ +K GIA ++ D++ E SL L
Sbjct: 59 QCEAAFGEALKLAPHLRERMEIVSKCGIATTAREENVIGHYITDRDHIIKSAEQSLINLA 118
Query: 123 VDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPGTIRRAHAVHP--ITA 180
D++DL HR D + +E K L + GK+++ G+S +P + P +
Sbjct: 119 TDHLDLLLIHRPDPLMDADEVADAFKHLHQSGKVRHFGVSNFTPAQFALLQSRLPFTLAT 178
Query: 181 VQMEWSLWTRDI-EEEIIPLCRELGIGIVPYSP 212
Q+E S + + + + ++L + + +S
Sbjct: 179 NQVEISPVHQPLLLDGTLDQLQQLRVRPMAWSC 211
|
| >d1hw6a_ c.1.7.1 (A:) 2,5-diketo-D-gluconic acid reductase A {Corynebacterium sp. [TaxId: 1720]} Length = 262 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: NAD(P)-linked oxidoreductase family: Aldo-keto reductases (NADP) domain: 2,5-diketo-D-gluconic acid reductase A species: Corynebacterium sp. [TaxId: 1720]
Score = 97.0 bits (240), Expect = 1e-24
Identities = 44/206 (21%), Positives = 71/206 (34%), Gaps = 20/206 (9%)
Query: 8 VPRVKLGTQGLEVSKLGYGCMNLSGGYSSPVSEEDGISMIKHAFSKGITFFDTADVYGQN 67
VP + L G + +LGYG + D ++ A G DTA +YG N
Sbjct: 2 VPSIVLND-GNSIPQLGYGVFKVP--------PADTQRAVEEALEVGYRHIDTAAIYG-N 51
Query: 68 ANEVLLGKALKQLPREKIQVATKFGIAGIGVAGVIVKGAPDYVRSCCEASLKRLDVDYID 127
V A + R+ + + TK + D + SL +L +D +D
Sbjct: 52 EEGVGAAIAASGIARDDLFITTKL---------WNDRHDGDEPAAAIAESLAKLALDQVD 102
Query: 128 LYYQHRVDTSVPIEE-TIGEMKKLVEEGKIKYIGLSEASPGTIRRAHAVHPITAVQMEWS 186
LY H + +M +L G + IG+S + R A + +
Sbjct: 103 LYLVHWPTPAADNYVHAWEKMIELRAAGLTRSIGVSNHLVPHLERIVAATGVVPAVNQIE 162
Query: 187 LWTRDIEEEIIPLCRELGIGIVPYSP 212
L + EI + I + P
Sbjct: 163 LHPAYQQREITDWAAAHDVKIESWGP 188
|
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 252 | |||
| d1pyfa_ | 311 | Putative oxidoreductase IolS {Bacillus subtilis [T | 100.0 | |
| d1pz1a_ | 333 | Putative oxidoreductase YhdN {Bacillus subtilis [T | 100.0 | |
| d1lqaa_ | 346 | Tas protein {Escherichia coli [TaxId: 562]} | 100.0 | |
| d1ur3m_ | 298 | Hypothetical oxidoreductase YdhF {Escherichia coli | 100.0 | |
| d1gvea_ | 324 | Aflatoxin aldehyde reductase (akr7a1) {Rat (Rattus | 100.0 | |
| d3eaua1 | 326 | Voltage-dependent K+ channel beta subunit {Rat (Ra | 100.0 | |
| d1hw6a_ | 262 | 2,5-diketo-D-gluconic acid reductase A {Corynebact | 100.0 | |
| d1qwka_ | 312 | Hypothetical protein C07D8.6 {Nematode (Caenorhabd | 100.0 | |
| d1afsa_ | 319 | 3-alpha-hydroxysteroid dehydrogenase {Rat (Rattus | 100.0 | |
| d1s1pa_ | 315 | Prostaglandin d2 11-ketoreductase (akr1c3) {Human | 100.0 | |
| d1us0a_ | 314 | Aldose reductase (aldehyde reductase) {Human (Homo | 100.0 | |
| d1mi3a_ | 319 | Xylose reductase {Fungi (Candida tenuis) [TaxId: 4 | 100.0 | |
| d1mzra_ | 274 | 2,5-diketo-D-gluconic acid reductase A {Escherichi | 100.0 | |
| d1hqta_ | 324 | Aldose reductase (aldehyde reductase) {Pig (Sus sc | 100.0 | |
| d1frba_ | 315 | FR-1 (fibroblast growth factor-induced) protein {M | 100.0 | |
| d1vp5a_ | 284 | 2,5-diketo-D-gluconic acid reductase A {Thermotoga | 100.0 | |
| d1jpma1 | 234 | L-Ala-D/L-Glu epimerase {Bacillus subtilis [TaxId: | 94.31 | |
| d1sjda1 | 242 | N-acylamino acid racemase {Amycolatopsis sp. [TaxI | 94.26 | |
| d2chra1 | 244 | Chlormuconate cycloisomerase {Alcaligenes eutrophu | 93.39 | |
| d1r0ma1 | 243 | N-acylamino acid racemase {Deinococcus radiodurans | 93.34 | |
| d1kkoa1 | 251 | beta-Methylaspartase {Citrobacter amalonaticus [Ta | 92.62 | |
| d1kcza1 | 253 | beta-Methylaspartase {Clostridium tetanomorphum [T | 92.2 | |
| d1wuea1 | 241 | N-acylamino acid racemase {Enterococcus faecalis [ | 91.95 | |
| d1nu5a1 | 243 | Chlormuconate cycloisomerase {Pseudomonas sp. p51 | 91.56 | |
| d1wufa1 | 244 | N-acylamino acid racemase {Listeria innocua [TaxId | 91.18 | |
| d1yeya1 | 252 | RTS beta protein {Xanthomonas campestris pv. campe | 90.19 | |
| d1jdfa1 | 309 | D-glucarate dehydratase {Escherichia coli [TaxId: | 89.66 | |
| d2gdqa1 | 256 | Hypothetical protein YitF {Bacillus subtilis [TaxI | 87.12 | |
| d1muca1 | 242 | Muconate-lactonizing enzyme {Pseudomonas putida [T | 83.83 | |
| d1gqna_ | 252 | Type I 3-dehydroquinate dehydratase {Salmonella ty | 81.75 |
| >d1pyfa_ c.1.7.1 (A:) Putative oxidoreductase IolS {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: NAD(P)-linked oxidoreductase family: Aldo-keto reductases (NADP) domain: Putative oxidoreductase IolS species: Bacillus subtilis [TaxId: 1423]
Probab=100.00 E-value=9e-51 Score=352.10 Aligned_cols=215 Identities=32% Similarity=0.598 Sum_probs=198.5
Q ss_pred CceecCCCCccccceeecccccCCC-CCCCCCHHHHHHHHHHHHHCCCCEEeCcCCcCCCcHHHHHHHHHhcCCCCCEEE
Q 025500 9 PRVKLGTQGLEVSKLGYGCMNLSGG-YSSPVSEEDGISMIKHAFSKGITFFDTADVYGQNANEVLLGKALKQLPREKIQV 87 (252)
Q Consensus 9 ~~~~lg~~g~~vs~lglG~~~~g~~-~~~~~~~~~~~~~l~~A~~~Gin~~Dta~~Yg~g~se~~ig~~l~~~~R~~~~i 87 (252)
++|+||+||++||+||||||++|+. ++...+++++.++|++|++.|||+||||+.||+|.+|+.+|++++..+|++++|
T Consensus 1 ~~~rLG~tgl~vS~iglGt~~~g~~~~~~~~~~~~a~~~l~~A~~~Gin~~DTA~~Yg~g~sE~~lg~~l~~~~r~~~~i 80 (311)
T d1pyfa_ 1 KKAKLGKSDLQVFPIGLGTNAVGGHNLYPNLNEETGKELVREAIRNGVTMLDTAYIYGIGRSEELIGEVLREFNREDVVI 80 (311)
T ss_dssp CCEECTTSCCEECSBCEECTTSSCTTTCSSCCHHHHHHHHHHHHHTTCCEEECCTTTTTTHHHHHHHHHHTTSCGGGCEE
T ss_pred CCcccCCCCCeecceeeeCcccCCCCCCCCCCHHHHHHHHHHHHHcCCCEEEehhhcCCCccHHHHhhhhhcccccceec
Confidence 4799999999999999999999863 334468999999999999999999999999999999999999999888999999
Q ss_pred EeccCccCCCCcccccCCChHHHHHHHHHHHHHcCCCcccEEEccCCCCCCCHHHHHHHHHHHHHcCCccEEEccCCCHH
Q 025500 88 ATKFGIAGIGVAGVIVKGAPDYVRSCCEASLKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPG 167 (252)
Q Consensus 88 ~tK~~~~~~~~~~~~~~~~~~~i~~~~~~sL~~Lg~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~G~ir~iGvs~~~~~ 167 (252)
+||++..... .....+.+++.+++++++||+||++||+|++++|+|+...+.+++|++|++++++|+||+||+|+++.+
T Consensus 81 ~tK~~~~~~~-~~~~~~~~~~~i~~s~~~SL~rl~~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~Gkir~iGvs~~~~~ 159 (311)
T d1pyfa_ 81 ATKAAHRKQG-NDFVFDNSPDFLKKSVDESLKRLNTDYIDLFYIHFPDEHTPKDEAVNALNEMKKAGKIRSIGVSNFSLE 159 (311)
T ss_dssp EEEECEEEET-TEEEECCCHHHHHHHHHHHHHHHTSSCBSEEEECSCCSSSCHHHHHHHHHHHHHTTSBSCEEEESCCHH
T ss_pred ceeccCCCCC-cccccccchHHHHHHHHhhHHhhCCcHHhhhcccCCCcccchhhHHHHHHHHHhCCeEEeecccCCcHH
Confidence 9999876532 223456889999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhcCCceEEeeecCccccchhhhHHHHHHHhCCeEEecccCccccCCCCCCC
Q 025500 168 TIRRAHAVHPITAVQMEWSLWTRDIEEEIIPLCRELGIGIVPYSPLGRGFFGGKAVV 224 (252)
Q Consensus 168 ~l~~~~~~~~~~~~q~~~~~~~~~~~~~l~~~~~~~gi~v~a~spl~~G~L~~~~~~ 224 (252)
.+.++.+..+++++|++||+.++..+.+++++|+++||++++|+||++|+|++++..
T Consensus 160 ~~~~~~~~~~~~~~q~~~n~~~~~~~~~~~~~~~~~~i~v~~~~~l~~G~l~~~~~~ 216 (311)
T d1pyfa_ 160 QLKEANKDGLVDVLQGEYNLLNREAEKTFFPYTKEHNISFIPYFPLVSGLLAGKYTE 216 (311)
T ss_dssp HHHHHTTTSCCCEEEEECBTTBCGGGTTHHHHHHHHTCEEEEESTTTTTGGGTCCCT
T ss_pred HHHHHhhcCCcceEeeeecccchhhhHHHHHHHHHCCceEEEeccccCCccCCCcCc
Confidence 999999999999999999999998778999999999999999999999999999553
|
| >d1pz1a_ c.1.7.1 (A:) Putative oxidoreductase YhdN {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: NAD(P)-linked oxidoreductase family: Aldo-keto reductases (NADP) domain: Putative oxidoreductase YhdN species: Bacillus subtilis [TaxId: 1423]
Probab=100.00 E-value=1.3e-49 Score=347.90 Aligned_cols=217 Identities=34% Similarity=0.551 Sum_probs=200.4
Q ss_pred cCceecCCCCccccceeecccccCCCCCCCCCHHHHHHHHHHHHHCCCCEEeCcCCcCCCcHHHHHHHHHhc-CCCCCEE
Q 025500 8 VPRVKLGTQGLEVSKLGYGCMNLSGGYSSPVSEEDGISMIKHAFSKGITFFDTADVYGQNANEVLLGKALKQ-LPREKIQ 86 (252)
Q Consensus 8 m~~~~lg~~g~~vs~lglG~~~~g~~~~~~~~~~~~~~~l~~A~~~Gin~~Dta~~Yg~g~se~~ig~~l~~-~~R~~~~ 86 (252)
|+||+||+||++||+||||||++|+.+....+++++.++|+.|++.|||+||||+.||+|.+|+.+|++++. ..|++++
T Consensus 1 M~yr~lG~tgl~vs~iglGt~~~g~~~~~~~~~~~a~~~l~~A~~~Gin~~DTA~~Yg~g~sE~~lG~~l~~~~~r~~~~ 80 (333)
T d1pz1a_ 1 MEYTSIADTGIEASRIGLGTWAIGGTMWGGTDEKTSIETIRAALDQGITLIDTAPAYGFGQSEEIVGKAIKEYMKRDQVI 80 (333)
T ss_dssp CCEEECTTSSCEEESEEEECTGGGCTTTTCCCHHHHHHHHHHHHHTTCCEEECCTTGGGGHHHHHHHHHHHHHTCGGGCE
T ss_pred CCCeECCCCCCCccCeeEcCCccCCCCCCCCCHHHHHHHHHHHHHcCCCEEEccCccCCCccHHHHhhccccccccchhh
Confidence 889999999999999999999999876556689999999999999999999999999999999999999987 7899999
Q ss_pred EEeccCccCCCCcccccCCChHHHHHHHHHHHHHcCCCcccEEEccCCCCCCCHHHHHHHHHHHHHcCCccEEEccCCCH
Q 025500 87 VATKFGIAGIGVAGVIVKGAPDYVRSCCEASLKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASP 166 (252)
Q Consensus 87 i~tK~~~~~~~~~~~~~~~~~~~i~~~~~~sL~~Lg~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~G~ir~iGvs~~~~ 166 (252)
++||.+..... .......+++.+.+++++||+||++||+|++++|+|+...+..++|++|++|+++|+|++||+||++.
T Consensus 81 ~~t~~~~~~~~-~~~~~~~~~~~~~~~~~~sL~rL~~~~iDl~~lH~~d~~~~~~~~~~~l~~l~~~G~ir~iGvS~~~~ 159 (333)
T d1pz1a_ 81 LATKTALDWKN-NQLFRHANRARIVEEVENSLKRLQTDYIDLYQVHWPDPLVPIEETAEVMKELYDAGKIRAIGVSNFSI 159 (333)
T ss_dssp EEEEECEEESS-SCEEECCCHHHHHHHHHHHHHHTTSSCBSEEEECSCCTTSCHHHHHHHHHHHHHTTSBSCEEECSCCH
T ss_pred ccccccccccc-ccccccchHHHHHHHHHhhhhccCCChhhccccccCccccchhhHHHHHHHHHHcCCEEEEeecccch
Confidence 99999865532 22345678999999999999999999999999999999899999999999999999999999999999
Q ss_pred HHHHHHhhcCCceEEeeecCccccchhhhHHHHHHHhCCeEEecccCccccCCCCCCCC
Q 025500 167 GTIRRAHAVHPITAVQMEWSLWTRDIEEEIIPLCRELGIGIVPYSPLGRGFFGGKAVVE 225 (252)
Q Consensus 167 ~~l~~~~~~~~~~~~q~~~~~~~~~~~~~l~~~~~~~gi~v~a~spl~~G~L~~~~~~~ 225 (252)
.++..+.....+..+|+.+|++++..+.+++++|+++||++++|+||++|+|++++...
T Consensus 160 ~~~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~gi~v~a~s~l~~G~Lt~~~~~~ 218 (333)
T d1pz1a_ 160 EQMDTFRAVAPLHTIQPPYNLFEREMEESVLPYAKDNKITTLLYGSLCRGLLTGKMTEE 218 (333)
T ss_dssp HHHHHHHTTSCCCEECCBCBTTBCGGGGTHHHHHHHTTCEEEEBCTTGGGTTSSCCCTT
T ss_pred hhccchhccccccccccccccccccccccccchhhcccccceeccccccccccCccCCC
Confidence 99999998889999999999999988899999999999999999999999999996543
|
| >d1lqaa_ c.1.7.1 (A:) Tas protein {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: NAD(P)-linked oxidoreductase family: Aldo-keto reductases (NADP) domain: Tas protein species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=9e-47 Score=331.49 Aligned_cols=214 Identities=29% Similarity=0.428 Sum_probs=180.9
Q ss_pred cCceecCCCCccccceeecccccCCCCCCCCCHHHHHHHHHHHHHCCCCEEeCcCCcC-------CCcHHHHHHHHHhc-
Q 025500 8 VPRVKLGTQGLEVSKLGYGCMNLSGGYSSPVSEEDGISMIKHAFSKGITFFDTADVYG-------QNANEVLLGKALKQ- 79 (252)
Q Consensus 8 m~~~~lg~~g~~vs~lglG~~~~g~~~~~~~~~~~~~~~l~~A~~~Gin~~Dta~~Yg-------~g~se~~ig~~l~~- 79 (252)
|+||+||+||++||+||||||.+|+ ..+++++.++|+.|++.|||+||||+.|| .|.+|..+|++++.
T Consensus 1 M~yr~lG~tgl~vs~iglGt~~~g~----~~~~~~a~~~l~~A~~~Gin~~DTA~~Yg~~~~~~~~G~~E~~~g~~~~~~ 76 (346)
T d1lqaa_ 1 MQYHRIPHSSLEVSTLGLGTMTFGE----QNSEADAHAQLDYAVAQGINLIDVAEMYPVPPRPETQGLTETYVGNWLAKH 76 (346)
T ss_dssp CCEEECTTSSCEEESEEEECTTBTT----TBCHHHHHHHHHHHHHTTCCEEECCTTCSSSCCTTTTTHHHHHHHHHHHHH
T ss_pred CCCeECCCCCCEecCeeEeCccCCC----CCCHHHHHHHHHHHHHcCCCEEEcccccCCCcccccccchhhhhcchhhhc
Confidence 8999999999999999999999875 34789999999999999999999999998 48899999999997
Q ss_pred CCCCCEEEEecc-CccCCC--CcccccCCChHHHHHHHHHHHHHcCCCcccEEEccCCCCC-----------------CC
Q 025500 80 LPREKIQVATKF-GIAGIG--VAGVIVKGAPDYVRSCCEASLKRLDVDYIDLYYQHRVDTS-----------------VP 139 (252)
Q Consensus 80 ~~R~~~~i~tK~-~~~~~~--~~~~~~~~~~~~i~~~~~~sL~~Lg~d~iDl~~lh~~~~~-----------------~~ 139 (252)
..+....+..+. +..... ........+++.+++++++||+|||+||||+|++|+|+.. ..
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~SL~rL~~d~iDl~~lH~~d~~~~~~~~~~~~~~~~~~~~~ 156 (346)
T d1lqaa_ 77 GSREKLIIASKVSGPSRNNDKGIRPDQALDRKNIREALHDSLKRLQTDYLDLYQVHWPQRPTNCFGKLGYSWTDSAPAVS 156 (346)
T ss_dssp CCGGGCEEEEEECCSCCTTCCCSSTTCCSSHHHHHHHHHHHHHHHTSSCEEEEEECSCSSCCSCTTCCSCCCCSSCCSSC
T ss_pred cccceeeeeecccCCCccccccccccccccHHHHHHHHHHHHHHhCCCeeeeeehhccCccccccccccccccccccccc
Confidence 333333333333 222111 1123456789999999999999999999999999998632 34
Q ss_pred HHHHHHHHHHHHHcCCccEEEccCCCHHHHHHHhhc------CCceEEeeecCccccchhhhHHHHHHHhCCeEEecccC
Q 025500 140 IEETIGEMKKLVEEGKIKYIGLSEASPGTIRRAHAV------HPITAVQMEWSLWTRDIEEEIIPLCRELGIGIVPYSPL 213 (252)
Q Consensus 140 ~~~~~~~L~~l~~~G~ir~iGvs~~~~~~l~~~~~~------~~~~~~q~~~~~~~~~~~~~l~~~~~~~gi~v~a~spl 213 (252)
.+++|++|++|+++|+||+||+||++.+++.++.+. .+|+++|++||++++..+.+++++|+++||.+++|+||
T Consensus 157 ~~~~~~~l~~l~~~G~ir~iGvS~~~~~~~~~~~~~~~~~~~~~~~~~q~~yn~~~~~~e~~~~~~~~~~~i~v~a~~pl 236 (346)
T d1lqaa_ 157 LLDTLDALAEYQRAGKIRYIGVSNETAFGVMRYLHLADKHDLPRIVTIQNPYSLLNRSFEVGLAEVSQYEGVELLAYSCL 236 (346)
T ss_dssp HHHHHHHHHHHHHTTSEEEEEEESCCHHHHHHHHHHHHHHTCCCCCEEEEECBTTBCTHHHHHHHHHHHHCCEEEEECTT
T ss_pred HHHHHHHHHHHHhCCCeeEEEEeccCHHHHHHHHHHhhhcCCCCeEEEeCCCccccchHHHHHHHHHHHhCCeEEEeccc
Confidence 578999999999999999999999999998887643 57999999999999987789999999999999999999
Q ss_pred ccccCCCCCCCC
Q 025500 214 GRGFFGGKAVVE 225 (252)
Q Consensus 214 ~~G~L~~~~~~~ 225 (252)
++|+|++++...
T Consensus 237 ~~G~Ltg~~~~~ 248 (346)
T d1lqaa_ 237 GFGTLTGKYLNG 248 (346)
T ss_dssp GGGGGGTTTGGG
T ss_pred ccccccCCccCC
Confidence 999999986543
|
| >d1ur3m_ c.1.7.1 (M:) Hypothetical oxidoreductase YdhF {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: NAD(P)-linked oxidoreductase family: Aldo-keto reductases (NADP) domain: Hypothetical oxidoreductase YdhF species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=6.6e-46 Score=319.40 Aligned_cols=211 Identities=27% Similarity=0.380 Sum_probs=188.0
Q ss_pred cCceecCCCCccccceeecccccCCCCCCCCCHHHHHHHHHHHHHCCCCEEeCcCCcCCCcHHHHHHHHHhc--CCCCCE
Q 025500 8 VPRVKLGTQGLEVSKLGYGCMNLSGGYSSPVSEEDGISMIKHAFSKGITFFDTADVYGQNANEVLLGKALKQ--LPREKI 85 (252)
Q Consensus 8 m~~~~lg~~g~~vs~lglG~~~~g~~~~~~~~~~~~~~~l~~A~~~Gin~~Dta~~Yg~g~se~~ig~~l~~--~~R~~~ 85 (252)
|++++||++|++||+||||||++++ |+ .+++++.++|++|++.|||+||||+.||+|.+|+.+|++|+. .+|+++
T Consensus 2 m~~~~lg~~G~~vs~ig~G~~~~~~-~~--~~~~~~~~~l~~A~~~Gin~~DTA~~Yg~g~se~~lG~al~~~~~~r~~~ 78 (298)
T d1ur3m_ 2 VQRITIAPQGPEFSRFVMGYWRLMD-WN--MSARQLVSFIEEHLDLGVTTVDHADIYGGYQCEAAFGEALKLAPHLRERM 78 (298)
T ss_dssp CCEEECSTTCCEEESSEEECTTTTT-TT--CCHHHHHHHHHHHHHHTCCEEECCSSTTTTTHHHHHHHHHHHCGGGTTTC
T ss_pred CCceEeCCCCCEeCCEEEeCcccCC-CC--CCHHHHHHHHHHHHHcCCCEEEeccccCCccccccccccccccccchhhh
Confidence 8999999999999999999999875 44 478999999999999999999999999999999999999986 579999
Q ss_pred EEEeccCccCCCC---cccccCCChHHHHHHHHHHHHHcCCCcccEEEccCCCCCCCHHHHHHHHHHHHHcCCccEEEcc
Q 025500 86 QVATKFGIAGIGV---AGVIVKGAPDYVRSCCEASLKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLS 162 (252)
Q Consensus 86 ~i~tK~~~~~~~~---~~~~~~~~~~~i~~~~~~sL~~Lg~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~G~ir~iGvs 162 (252)
+|+||++...... .....+.+++.+++++++||+|||+||||+|++|+++...+.+++|++|++++++|+||+||+|
T Consensus 79 ~i~tK~g~~~~~~~~~~~~~~~~s~~~i~~~~~~SL~rL~~d~iDl~~lH~~d~~~~~~e~~~~l~~lk~~GkIr~iG~S 158 (298)
T d1ur3m_ 79 EIVSKCGIATTAREENVIGHYITDRDHIIKSAEQSLINLATDHLDLLLIHRPDPLMDADEVADAFKHLHQSGKVRHFGVS 158 (298)
T ss_dssp EEEEEECEECTTSTTCSSCEECCCHHHHHHHHHHHHHHHTCSCBSEEEECSCCTTCCHHHHHHHHHHHHHTTSBCCEEEE
T ss_pred hhhhcccccccCCCcCcccCCCCCHHHHHHHHHhhhhhhccccccccccccccccchhHHHHHHHHHhhccCcceeecCC
Confidence 9999998755321 1234567899999999999999999999999999999989999999999999999999999999
Q ss_pred CCCHHHHHHHhhcCC--ceEEeeecCccccchh-hhHHHHHHHhCCeEEecccCccccCCCC
Q 025500 163 EASPGTIRRAHAVHP--ITAVQMEWSLWTRDIE-EEIIPLCRELGIGIVPYSPLGRGFFGGK 221 (252)
Q Consensus 163 ~~~~~~l~~~~~~~~--~~~~q~~~~~~~~~~~-~~l~~~~~~~gi~v~a~spl~~G~L~~~ 221 (252)
||+++.++++....+ +..+|++++++++... ..+...|++++|.+++++||++|.+...
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~l~~~~~~~~ 220 (298)
T d1ur3m_ 159 NFTPAQFALLQSRLPFTLATNQVEISPVHQPLLLDGTLDQLQQLRVRPMAWSCLGGGRLFND 220 (298)
T ss_dssp SCCHHHHHHHHTTCSSCCCCEEEECBTTBCGGGTSSHHHHHHHHTCCCEEECCCTTTCSSSC
T ss_pred CCcHHHHHHHHhhhcccccccccccCchhhhhhhhhhhhhHhhcCEeeeecccccccccccc
Confidence 999999999887644 5556777888887644 6788999999999999999999988765
|
| >d3eaua1 c.1.7.1 (A:36-361) Voltage-dependent K+ channel beta subunit {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: NAD(P)-linked oxidoreductase family: Aldo-keto reductases (NADP) domain: Voltage-dependent K+ channel beta subunit species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=100.00 E-value=3.6e-45 Score=318.41 Aligned_cols=213 Identities=29% Similarity=0.458 Sum_probs=189.5
Q ss_pred CceecCCCCccccceeecccccCCCCCCCCCHHHHHHHHHHHHHCCCCEEeCcCCcCCCcHHHHHHHHHhc--CCCCCEE
Q 025500 9 PRVKLGTQGLEVSKLGYGCMNLSGGYSSPVSEEDGISMIKHAFSKGITFFDTADVYGQNANEVLLGKALKQ--LPREKIQ 86 (252)
Q Consensus 9 ~~~~lg~~g~~vs~lglG~~~~g~~~~~~~~~~~~~~~l~~A~~~Gin~~Dta~~Yg~g~se~~ig~~l~~--~~R~~~~ 86 (252)
-||+||+||++||+||||||+.. |...+.+++.++|++|++.|||+||||+.||+|.+|+.+|++++. ..|++++
T Consensus 3 ~YR~lG~tg~~vs~iglGt~~~~---g~~~~~~~a~~~l~~A~~~Gin~~DTA~~Yg~g~sE~~lG~~l~~~~~~r~~~~ 79 (326)
T d3eaua1 3 FYRNLGKSGLRVSCLGLGTWVTF---GGQITDEMAEHLMTLAYDNGINLFDTAEVYAAGKAEVVLGNIIKKKGWRRSSLV 79 (326)
T ss_dssp SEEESTTSSCEEESEEEECTTCC---CCCSCHHHHHHHHHHHHHTTCCEEEEETTGGGGHHHHHHHHHHHHHTCCGGGCE
T ss_pred ccccCCCCCCcccCeeecCCCcc---CCCCCHHHHHHHHHHHHHcCCCEEECccccCCCchHHHHhHHHHhcCCcceeEE
Confidence 38999999999999999999753 334588999999999999999999999999999999999999986 6799999
Q ss_pred EEeccCccCCCCcccccCCChHHHHHHHHHHHHHcCCCcccEEEccCCCCCCCHHHHHHHHHHHHHcCCccEEEccCCCH
Q 025500 87 VATKFGIAGIGVAGVIVKGAPDYVRSCCEASLKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASP 166 (252)
Q Consensus 87 i~tK~~~~~~~~~~~~~~~~~~~i~~~~~~sL~~Lg~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~G~ir~iGvs~~~~ 166 (252)
|+||++..... ...++.+++.+.+++++||+||++||||+|++|+|+...+..+.++.+.+++++|+++++|+|+++.
T Consensus 80 i~tk~~~~~~~--~~~~~~~~~~~~~s~~~SL~rL~~d~iDl~~lH~pd~~~~~~e~~~~~~~~~~~g~~~~~g~s~~~~ 157 (326)
T d3eaua1 80 ITTKIFWGGKA--ETERGLSRKHIIEGLKASLERLQLEYVDVVFANRPDPNTPMEETVRAMTHVINQGMAMYWGTSRWSS 157 (326)
T ss_dssp EEEEESBCCSS--GGGBSSSHHHHHHHHHHHHHHHTCSCEEEEEESSCCTTSCHHHHHHHHHHHHHTTSEEEEEEESCCH
T ss_pred eeeeccccccc--ccccCccHHHHHHHHHHHHhhcCccceeeecccCCCccccchhhhcccceeeeeecccccccccccc
Confidence 99999876532 2345678999999999999999999999999999998889999999999999999999999999998
Q ss_pred HHHHHHhh------cCCceEEeeecCccccchh-hhHHHHHHHhCCeEEecccCccccCCCCCCCCC
Q 025500 167 GTIRRAHA------VHPITAVQMEWSLWTRDIE-EEIIPLCRELGIGIVPYSPLGRGFFGGKAVVEN 226 (252)
Q Consensus 167 ~~l~~~~~------~~~~~~~q~~~~~~~~~~~-~~l~~~~~~~gi~v~a~spl~~G~L~~~~~~~~ 226 (252)
....+... ..++.++|..+|++++..+ .+++++|+++||+|++|+||++|+|++++....
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~v~~~spl~~G~l~~~~~~~~ 224 (326)
T d3eaua1 158 MEIMEAYSVARQFNLIPPICEQAEYHMFQREKVEVQLPELFHKIGVGAMTWSPLACGIVSGKYDSGI 224 (326)
T ss_dssp HHHHHHHHHHHHTTCCCCCEEEEECBTTBCHHHHHHHHHHHHHHCCEEEEECTTGGGGGGTTTTTSC
T ss_pred chhhhhhcchhccCCCceeeeccccchhhhhhhHHHHHHHHHHcCCEEEeecccccCccccccCCCC
Confidence 87666533 3578899999999998644 679999999999999999999999999965443
|
| >d1hw6a_ c.1.7.1 (A:) 2,5-diketo-D-gluconic acid reductase A {Corynebacterium sp. [TaxId: 1720]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: NAD(P)-linked oxidoreductase family: Aldo-keto reductases (NADP) domain: 2,5-diketo-D-gluconic acid reductase A species: Corynebacterium sp. [TaxId: 1720]
Probab=100.00 E-value=2.9e-43 Score=298.01 Aligned_cols=194 Identities=24% Similarity=0.366 Sum_probs=168.5
Q ss_pred ccCceecCCCCccccceeecccccCCCCCCCCCHHHHHHHHHHHHHCCCCEEeCcCCcCCCcHHHHHHHHHhc--CCCCC
Q 025500 7 QVPRVKLGTQGLEVSKLGYGCMNLSGGYSSPVSEEDGISMIKHAFSKGITFFDTADVYGQNANEVLLGKALKQ--LPREK 84 (252)
Q Consensus 7 ~m~~~~lg~~g~~vs~lglG~~~~g~~~~~~~~~~~~~~~l~~A~~~Gin~~Dta~~Yg~g~se~~ig~~l~~--~~R~~ 84 (252)
+.|+++| +||++||.||||||++ +.+++.+++++|++.|||+||||+.||+ |+.++.+++. ..|++
T Consensus 1 ~ip~~~l-~~G~~v~~ig~Gt~~~--------~~~~~~~~l~~A~d~Gi~~~DTA~~YG~---ee~~~~~~~~~~~~r~~ 68 (262)
T d1hw6a_ 1 TVPSIVL-NDGNSIPQLGYGVFKV--------PPADTQRAVEEALEVGYRHIDTAAIYGN---EEGVGAAIAASGIARDD 68 (262)
T ss_dssp CCCEEEC-TTSCEEESBCEECCSC--------CGGGHHHHHHHHHHHTCCEEECGGGTTC---CHHHHHHHHHHCCCGGG
T ss_pred CCCeEEC-CCCCEecceeeeCCCC--------ChHHHHHHHHHHHHcCCCEEEcccccCC---hhhhCcccccCCCCcce
Confidence 4678999 8999999999999986 4578899999999999999999999994 4555555554 78999
Q ss_pred EEEEeccCccCCCCcccccCCChHHHHHHHHHHHHHcCCCcccEEEccCCCCCCC-HHHHHHHHHHHHHcCCccEEEccC
Q 025500 85 IQVATKFGIAGIGVAGVIVKGAPDYVRSCCEASLKRLDVDYIDLYYQHRVDTSVP-IEETIGEMKKLVEEGKIKYIGLSE 163 (252)
Q Consensus 85 ~~i~tK~~~~~~~~~~~~~~~~~~~i~~~~~~sL~~Lg~d~iDl~~lh~~~~~~~-~~~~~~~L~~l~~~G~ir~iGvs~ 163 (252)
+++.||.+... .+++.+++++++||+|||+||+|+|++|+|+...+ ..++|++|++||++|+||+||+||
T Consensus 69 ~~~~tk~~~~~---------~~~~~~~~sl~~SL~rL~~d~iDl~~lH~~~~~~~~~~~~~~~l~~l~~~G~ir~iG~s~ 139 (262)
T d1hw6a_ 69 LFITTKLWNDR---------HDGDEPAAAIAESLAKLALDQVDLYLVHWPTPAADNYVHAWEKMIELRAAGLTRSIGVSN 139 (262)
T ss_dssp CEEEEEECCC--------------CHHHHHHHHHHHHTCSCEEEEEECCCCTTCSSHHHHHHHHHHHHHTTSEEEEEEES
T ss_pred EEEeeeccccc---------ccccchhhhhhhhhhhcccceeeeeeeeccCCCCccchhhHHHHHHHHHhCcceeeeccc
Confidence 99999998654 56788999999999999999999999999987654 679999999999999999999999
Q ss_pred CCHHHHHHHhhcCCceEEeeecCccccchhhhHHHHHHHhCCeEEecccCccccCCCC
Q 025500 164 ASPGTIRRAHAVHPITAVQMEWSLWTRDIEEEIIPLCRELGIGIVPYSPLGRGFFGGK 221 (252)
Q Consensus 164 ~~~~~l~~~~~~~~~~~~q~~~~~~~~~~~~~l~~~~~~~gi~v~a~spl~~G~L~~~ 221 (252)
++.+.++++....++..+|+.||+..+..+..++++|+++||.+++|+||++|.+...
T Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~a~~pl~~G~~~~~ 197 (262)
T d1hw6a_ 140 HLVPHLERIVAATGVVPAVNQIELHPAYQQREITDWAAAHDVKIESWGPLGQGKYDLF 197 (262)
T ss_dssp CCHHHHHHHHHHHSCCCSEEEEECBTTBCCHHHHHHHHHTTCEEEEESTTGGGSSCCT
T ss_pred ccchhhhhHhhhcccCCccceechhhccccccchhhHHHcCcEEEEeecccccccccc
Confidence 9999999998887777888888888877778899999999999999999999987543
|
| >d1qwka_ c.1.7.1 (A:) Hypothetical protein C07D8.6 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: NAD(P)-linked oxidoreductase family: Aldo-keto reductases (NADP) domain: Hypothetical protein C07D8.6 species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=100.00 E-value=1.5e-42 Score=300.44 Aligned_cols=191 Identities=27% Similarity=0.415 Sum_probs=169.9
Q ss_pred ceecCCCCccccceeecccccCCCCCCCCCHHHHHHHHHHHHHCCCCEEeCcCCcCCCcHHHHHHHHHhc------CCCC
Q 025500 10 RVKLGTQGLEVSKLGYGCMNLSGGYSSPVSEEDGISMIKHAFSKGITFFDTADVYGQNANEVLLGKALKQ------LPRE 83 (252)
Q Consensus 10 ~~~lg~~g~~vs~lglG~~~~g~~~~~~~~~~~~~~~l~~A~~~Gin~~Dta~~Yg~g~se~~ig~~l~~------~~R~ 83 (252)
+++| +||++||.||||||++ +++++.+++++|++.|||+||||+.|| +|+.+|++|+. ..|+
T Consensus 3 ~~kL-~tG~~vs~lg~Gt~~~--------~~~~~~~~i~~Al~~Gin~~DTA~~Yg---sE~~lG~al~~~~~~~~~~r~ 70 (312)
T d1qwka_ 3 SIKL-SNGVEMPVIGLGTWQS--------SPAEVITAVKTAVKAGYRLIDTASVYQ---NEEAIGTAIKELLEEGVVKRE 70 (312)
T ss_dssp EEEC-TTSCEEESBCEECTTC--------CHHHHHHHHHHHHHHTCCEEECCGGGT---CHHHHHHHHHHHHHHTSCCGG
T ss_pred cEEC-CCCCccccceeECCCC--------CHHHHHHHHHHHHHcCCCEEEChhhhc---CHHHHHHHHHHhhhccccccc
Confidence 5789 7999999999999975 678999999999999999999999998 89999999986 5799
Q ss_pred CEEEEeccCccCCCCcccccCCChHHHHHHHHHHHHHcCCCcccEEEccCCCC---------CCCHHHHHHHHHHHHHcC
Q 025500 84 KIQVATKFGIAGIGVAGVIVKGAPDYVRSCCEASLKRLDVDYIDLYYQHRVDT---------SVPIEETIGEMKKLVEEG 154 (252)
Q Consensus 84 ~~~i~tK~~~~~~~~~~~~~~~~~~~i~~~~~~sL~~Lg~d~iDl~~lh~~~~---------~~~~~~~~~~L~~l~~~G 154 (252)
++++.+|..... .+++.+++++++||+||++||+|+|++|+|+. ..+++++|++|++++++|
T Consensus 71 ~~~i~~k~~~~~---------~~~~~~~~~~~~SL~rL~~d~iDl~~lH~p~~~~~~~~~~~~~~~ee~~~~l~~l~~~G 141 (312)
T d1qwka_ 71 ELFITTKAWTHE---------LAPGKLEGGLRESLKKLQLEYVDLYLAHMPAAFNDDMSEHIASPVEDVWRQFDAVYKAG 141 (312)
T ss_dssp GCEEEEEECTTT---------SSTTTHHHHHHHHHHHHTCSCBSEEEESCSCEECTTSCSEECCCHHHHHHHHHHHHHTT
T ss_pred cceeeccccccc---------ccchhHHHHHHHHhhhcCCCcceeeecccCCcccccccccccCcHHHHHHHHHHHHhcC
Confidence 999999987654 56888999999999999999999999999963 345789999999999999
Q ss_pred CccEEEccCCCHHHHHHHhhcCCceEEeeecCccccchhhhHHHHHHHhCCeEEecccCccccCCCC
Q 025500 155 KIKYIGLSEASPGTIRRAHAVHPITAVQMEWSLWTRDIEEEIIPLCRELGIGIVPYSPLGRGFFGGK 221 (252)
Q Consensus 155 ~ir~iGvs~~~~~~l~~~~~~~~~~~~q~~~~~~~~~~~~~l~~~~~~~gi~v~a~spl~~G~L~~~ 221 (252)
+||+||+||++.+++++++....+.++|..++...+..+.+++++|+++||++++|+||++|.+...
T Consensus 142 ~ir~iG~Sn~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~a~spL~~g~~~~~ 208 (312)
T d1qwka_ 142 LAKAVGVSNWNNDQISRALALGLTPVHNSQVELHLYFPQHDHVDFCKKHNISVTSYATLGSPGRVNF 208 (312)
T ss_dssp SBSSEEEESCCHHHHHHHHTTCSSCCCEEEEECBTTBCCHHHHHHHHHTTCEEEEESTTCSCCEECC
T ss_pred ccccccccccchhHHHHHhhccccchhhhhhcchhhcccHHHHHHHHhcCccccccCcccccccccC
Confidence 9999999999999999999887666666666655555568899999999999999999999876654
|
| >d1afsa_ c.1.7.1 (A:) 3-alpha-hydroxysteroid dehydrogenase {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: NAD(P)-linked oxidoreductase family: Aldo-keto reductases (NADP) domain: 3-alpha-hydroxysteroid dehydrogenase species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=100.00 E-value=3.4e-42 Score=299.12 Aligned_cols=196 Identities=27% Similarity=0.377 Sum_probs=170.6
Q ss_pred ccCceecCCCCccccceeecccccCCCCCCCCCHHHHHHHHHHHHHCCCCEEeCcCCcCCCcHHHHHHHHHhc------C
Q 025500 7 QVPRVKLGTQGLEVSKLGYGCMNLSGGYSSPVSEEDGISMIKHAFSKGITFFDTADVYGQNANEVLLGKALKQ------L 80 (252)
Q Consensus 7 ~m~~~~lg~~g~~vs~lglG~~~~g~~~~~~~~~~~~~~~l~~A~~~Gin~~Dta~~Yg~g~se~~ig~~l~~------~ 80 (252)
+|++|..+++|.+||.||||||.++. .+.+++.++|+.|++.|||+||||+.|| +|+.+|++|+. +
T Consensus 3 ~~~~r~~~~~G~~ip~iGlGt~~~~~-----~~~~~~~~~i~~A~d~Gin~~DTA~~Yg---sE~~lG~~l~~~~~~~~~ 74 (319)
T d1afsa_ 3 SISLRVALNDGNFIPVLGFGTTVPEK-----VAKDEVIKATKIAIDNGFRHFDSAYLYE---VEEEVGQAIRSKIEDGTV 74 (319)
T ss_dssp GGGCEEECTTSCEEESSEEECCCCTT-----SCTTHHHHHHHHHHHTTCCEEECCTTTT---CHHHHHHHHHHHHHTTSC
T ss_pred ccCceEECCCcCEEcCEeeECCCCCC-----CCHHHHHHHHHHHHHcCCCEEECccccc---CHHHHHHHHHhhhhhccc
Confidence 56777777999999999999998653 3678899999999999999999999998 89999999985 5
Q ss_pred CCCCEEEEeccCccCCCCcccccCCChHHHHHHHHHHHHHcCCCcccEEEccCCCC-------------------CCCHH
Q 025500 81 PREKIQVATKFGIAGIGVAGVIVKGAPDYVRSCCEASLKRLDVDYIDLYYQHRVDT-------------------SVPIE 141 (252)
Q Consensus 81 ~R~~~~i~tK~~~~~~~~~~~~~~~~~~~i~~~~~~sL~~Lg~d~iDl~~lh~~~~-------------------~~~~~ 141 (252)
.|+.+++.+|.+... .+++.+++++++||+|||+||+|+|++|+|+. ..+++
T Consensus 75 ~~~~~~~~~~~~~~~---------~~~~~~~~s~e~SL~rL~~d~iDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 145 (319)
T d1afsa_ 75 KREDIFYTSKLWSTF---------HRPELVRTCLEKTLKSTQLDYVDLYIIHFPMALQPGDIFFPRDEHGKLLFETVDIC 145 (319)
T ss_dssp CGGGCEEEEEECGGG---------CSTTTHHHHHHHHHHHHCCSSEEEEEESCSCEECSSSSSSCBCTTCCBCEECCCHH
T ss_pred cceeeeecccccccc---------cchhhHHHHHHHHHhhcCCcccceeEeccccCCCCCccccCccccccccccCCCHH
Confidence 789999999987654 56788999999999999999999999999853 23478
Q ss_pred HHHHHHHHHHHcCCccEEEccCCCHHHHHHHhhcC----CceEEeeecCccccchhhhHHHHHHHhCCeEEecccCcccc
Q 025500 142 ETIGEMKKLVEEGKIKYIGLSEASPGTIRRAHAVH----PITAVQMEWSLWTRDIEEEIIPLCRELGIGIVPYSPLGRGF 217 (252)
Q Consensus 142 ~~~~~L~~l~~~G~ir~iGvs~~~~~~l~~~~~~~----~~~~~q~~~~~~~~~~~~~l~~~~~~~gi~v~a~spl~~G~ 217 (252)
++|++|++|+++|+||+||+||++.+.++++++.. .+.++|+.+++... +.+++++|+++||++++|+||++|.
T Consensus 146 e~~~~l~~l~~~Gkir~iGvSn~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~ll~~~~~~~i~i~a~spl~~G~ 223 (319)
T d1afsa_ 146 DTWEAMEKCKDAGLAKSIGVSNFNCRQLERILNKPGLKYKPVCNQVECHLYLN--QSKMLDYCKSKDIILVSYCTLGSSR 223 (319)
T ss_dssp HHHHHHHHHHHTTSEEEEEEESCCHHHHHHHHTCTTCCSCCSEEEEECBTTBC--CHHHHHHHHHHTCEEEEESTTSCCC
T ss_pred HHHHHHHHHHHcCCEEEEeeccccHHHHHHHHHhhcccccccccccchhhccc--hHHHhHHHHHcCceecccccccccc
Confidence 99999999999999999999999999999987652 34566666666554 4789999999999999999999998
Q ss_pred CCCC
Q 025500 218 FGGK 221 (252)
Q Consensus 218 L~~~ 221 (252)
+...
T Consensus 224 ~~~~ 227 (319)
T d1afsa_ 224 DKTW 227 (319)
T ss_dssp CTTT
T ss_pred ccCc
Confidence 8865
|
| >d1s1pa_ c.1.7.1 (A:) Prostaglandin d2 11-ketoreductase (akr1c3) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: NAD(P)-linked oxidoreductase family: Aldo-keto reductases (NADP) domain: Prostaglandin d2 11-ketoreductase (akr1c3) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.6e-41 Score=293.06 Aligned_cols=192 Identities=28% Similarity=0.379 Sum_probs=172.1
Q ss_pred ceecCCCCccccceeecccccCCCCCCCCCHHHHHHHHHHHHHCCCCEEeCcCCcCCCcHHHHHHHHHhc------CCCC
Q 025500 10 RVKLGTQGLEVSKLGYGCMNLSGGYSSPVSEEDGISMIKHAFSKGITFFDTADVYGQNANEVLLGKALKQ------LPRE 83 (252)
Q Consensus 10 ~~~lg~~g~~vs~lglG~~~~g~~~~~~~~~~~~~~~l~~A~~~Gin~~Dta~~Yg~g~se~~ig~~l~~------~~R~ 83 (252)
.++| ++|.+||.||||||++|. .+++++.++|++|++.|||+||||+.|| +|+.+|++|+. .+|+
T Consensus 2 ~~~l-~~G~~ip~lGlGt~~~g~-----~~~~~~~~~l~~A~d~Gin~fDTA~~Yg---sE~~lG~~l~~~~~~~~~~~~ 72 (315)
T d1s1pa_ 2 CVKL-NDGHFMPVLGFGTYAPPE-----VPRSKALEVTKLAIEAGFRHIDSAHLYN---NEEQVGLAIRSKIADGSVKRE 72 (315)
T ss_dssp EEEC-TTSCEEESEEEECCCCTT-----SCTTHHHHHHHHHHHHTCCEEECCGGGT---CHHHHHHHHHHHHHTTSCCGG
T ss_pred eEEC-CCCCeecceeeecCCCCC-----CCHHHHHHHHHHHHHcCCCEEEcCCccC---CHHHHHHHHHHHHHhcccccc
Confidence 4688 999999999999998764 3778999999999999999999999999 79999999985 6899
Q ss_pred CEEEEeccCccCCCCcccccCCChHHHHHHHHHHHHHcCCCcccEEEccCCCCC-------------------CCHHHHH
Q 025500 84 KIQVATKFGIAGIGVAGVIVKGAPDYVRSCCEASLKRLDVDYIDLYYQHRVDTS-------------------VPIEETI 144 (252)
Q Consensus 84 ~~~i~tK~~~~~~~~~~~~~~~~~~~i~~~~~~sL~~Lg~d~iDl~~lh~~~~~-------------------~~~~~~~ 144 (252)
++++.||..... .+++.+++++++||+||++||||+|++|+|+.. .++.++|
T Consensus 73 ~~~~~t~~~~~~---------~~~~~v~~~~~~SL~rL~~d~iDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 143 (315)
T d1s1pa_ 73 DIFYTSKLWSTF---------HRPELVRPALENSLKKAQLDYVDLYLIHSPMSLKPGEELSPTDENGKVIFDIVDLCTTW 143 (315)
T ss_dssp GCEEEEEECGGG---------CSHHHHHHHHHHHHHHHTCSCEEEEEECCSCCBCCSSCSSCBCTTSCBCBCCCCHHHHH
T ss_pred cccccccccccc---------CCccchhhhHHHHHHhhCCCchhhccccCCCCCCcccccCccccccccccccccHHHHH
Confidence 999999997654 579999999999999999999999999998642 2467899
Q ss_pred HHHHHHHHcCCccEEEccCCCHHHHHHHhhc----CCceEEeeecCccccchhhhHHHHHHHhCCeEEecccCccccCCC
Q 025500 145 GEMKKLVEEGKIKYIGLSEASPGTIRRAHAV----HPITAVQMEWSLWTRDIEEEIIPLCRELGIGIVPYSPLGRGFFGG 220 (252)
Q Consensus 145 ~~L~~l~~~G~ir~iGvs~~~~~~l~~~~~~----~~~~~~q~~~~~~~~~~~~~l~~~~~~~gi~v~a~spl~~G~L~~ 220 (252)
++|++|+++|+||+||+||++.+++++++.. ..+.++|+.++++.+. .+++++|+++||++++|+||++|.+..
T Consensus 144 ~~l~~l~~~G~ir~iGvS~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~--~~l~~~~~~~~i~v~a~~pl~~g~~~~ 221 (315)
T d1s1pa_ 144 EAMEKCKDAGLAKSIGVSNFNRRQLEMILNKPGLKYKPVCNQVECHPYFNR--SKLLDFCKSKDIVLVAYSALGSQRDKR 221 (315)
T ss_dssp HHHHHHHHTTSEEEEEEESCCHHHHHHHHTCTTCCCCCSEEEEECBTTBCC--HHHHHHHHHTTCEEEEESTTSCCCCTT
T ss_pred HHHHHHHHcCcccccCCCCCCHHHHHHHHHhhccccCcchhhccccccccH--HHHHHHHHHcCCccccccccccccccc
Confidence 9999999999999999999999999988764 4567889999888764 689999999999999999999998876
Q ss_pred C
Q 025500 221 K 221 (252)
Q Consensus 221 ~ 221 (252)
.
T Consensus 222 ~ 222 (315)
T d1s1pa_ 222 W 222 (315)
T ss_dssp T
T ss_pred c
Confidence 5
|
| >d1us0a_ c.1.7.1 (A:) Aldose reductase (aldehyde reductase) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: NAD(P)-linked oxidoreductase family: Aldo-keto reductases (NADP) domain: Aldose reductase (aldehyde reductase) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=5.1e-41 Score=290.99 Aligned_cols=193 Identities=27% Similarity=0.388 Sum_probs=169.8
Q ss_pred cCceecCCCCccccceeecccccCCCCCCCCCHHHHHHHHHHHHHCCCCEEeCcCCcCCCcHHHHHHHHHhc------CC
Q 025500 8 VPRVKLGTQGLEVSKLGYGCMNLSGGYSSPVSEEDGISMIKHAFSKGITFFDTADVYGQNANEVLLGKALKQ------LP 81 (252)
Q Consensus 8 m~~~~lg~~g~~vs~lglG~~~~g~~~~~~~~~~~~~~~l~~A~~~Gin~~Dta~~Yg~g~se~~ig~~l~~------~~ 81 (252)
|.+|.+++||++||.||||||++ +++++.++|++|+++|||+||||+.|| +|+.+|++|++ +.
T Consensus 1 ~~~r~~~~tG~~vs~iglGtw~~--------~~~~~~~~i~~A~~~Gin~fDTA~~Yg---sE~~lG~~l~~~~~~~~~~ 69 (314)
T d1us0a_ 1 MASRILLNNGAKMPILGLGTWKS--------PPGQVTEAVKVAIDVGYRHIDCAHVYQ---NENEVGVAIQEKLREQVVK 69 (314)
T ss_dssp CCSEEECTTSCEEESBCEECTTC--------CHHHHHHHHHHHHHHTCCEEECCGGGT---CHHHHHHHHHHHHHTTSSC
T ss_pred CCCceECCCcCEecceeeECCCC--------CHHHHHHHHHHHHHcCCCEEECccccC---ChHHHHHHHHhhhhccccc
Confidence 78999999999999999999874 689999999999999999999999999 79999999986 45
Q ss_pred CCCEEEEeccCccCCCCcccccCCChHHHHHHHHHHHHHcCCCcccEEEccCCCC-------------------CCCHHH
Q 025500 82 REKIQVATKFGIAGIGVAGVIVKGAPDYVRSCCEASLKRLDVDYIDLYYQHRVDT-------------------SVPIEE 142 (252)
Q Consensus 82 R~~~~i~tK~~~~~~~~~~~~~~~~~~~i~~~~~~sL~~Lg~d~iDl~~lh~~~~-------------------~~~~~~ 142 (252)
|.+..+.++..... .+++.+.+++++||+||++||||++++|+|+. ....++
T Consensus 70 ~~~~~~~~~~~~~~---------~~~~~~~~~~~~SL~rl~~d~idl~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~e 140 (314)
T d1us0a_ 70 REELFIVSKLWCTY---------HEKGLVKGACQKTLSDLKLDYLDLYLIHWPTGFKPGKEFFPLDESGNVVPSDTNILD 140 (314)
T ss_dssp GGGCEEEEEECGGG---------CSHHHHHHHHHHHHHHHTCSCBSEEEESSSCCBCCSSCSSCBCTTSCBCBCSCCHHH
T ss_pred cccccccccccccc---------ccchhhHHHHHHHhhhcCCCceeeeeeccCCCCCcccccCCcccccccCCCCCCHHH
Confidence 66666666665433 57999999999999999999999999999853 234679
Q ss_pred HHHHHHHHHHcCCccEEEccCCCHHHHHHHhhc----CCceEEeeecCccccchhhhHHHHHHHhCCeEEecccCccccC
Q 025500 143 TIGEMKKLVEEGKIKYIGLSEASPGTIRRAHAV----HPITAVQMEWSLWTRDIEEEIIPLCRELGIGIVPYSPLGRGFF 218 (252)
Q Consensus 143 ~~~~L~~l~~~G~ir~iGvs~~~~~~l~~~~~~----~~~~~~q~~~~~~~~~~~~~l~~~~~~~gi~v~a~spl~~G~L 218 (252)
+|++|++||++|+||+||+||++.++++++... ..+.++|+.+++.... .+++++|+++||++++|+||++|.+
T Consensus 141 ~~~~L~~lk~~G~Ir~iGvS~~~~~~l~~~~~~~~~~~~~~~~q~~~~~~~~~--~~l~~~~~~~~i~~~~~~pl~~g~~ 218 (314)
T d1us0a_ 141 TWAAMEELVDEGLVKAIGISNFNHLQVEMILNKPGLKYKPAVNQIECHPYLTQ--EKLIQYCQSKGIVVTAYSPLGSPDR 218 (314)
T ss_dssp HHHHHHHHHHTTSBSCEEEESCCHHHHHHHHTCTTCCSCCSEEEEECBTTBCC--HHHHHHHHHTTCEEEEESTTCCTTC
T ss_pred HHHHHHHHHHcCCeeEeeccCCCHHHHHHHHHhccCCcCchhhhhhcchhhhH--HHHHHHHHHcCCeeeccCccccccc
Confidence 999999999999999999999999999988765 3577889999887664 6899999999999999999999988
Q ss_pred CCCC
Q 025500 219 GGKA 222 (252)
Q Consensus 219 ~~~~ 222 (252)
...+
T Consensus 219 ~~~~ 222 (314)
T d1us0a_ 219 PWAK 222 (314)
T ss_dssp TTCC
T ss_pred cccC
Confidence 8763
|
| >d1mi3a_ c.1.7.1 (A:) Xylose reductase {Fungi (Candida tenuis) [TaxId: 45596]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: NAD(P)-linked oxidoreductase family: Aldo-keto reductases (NADP) domain: Xylose reductase species: Fungi (Candida tenuis) [TaxId: 45596]
Probab=100.00 E-value=1.1e-40 Score=289.42 Aligned_cols=192 Identities=30% Similarity=0.476 Sum_probs=170.1
Q ss_pred ccCceecCCCCccccceeecccccCCCCCCCCCHHHHHHHHHHHHHCCCCEEeCcCCcCCCcHHHHHHHHHhc------C
Q 025500 7 QVPRVKLGTQGLEVSKLGYGCMNLSGGYSSPVSEEDGISMIKHAFSKGITFFDTADVYGQNANEVLLGKALKQ------L 80 (252)
Q Consensus 7 ~m~~~~lg~~g~~vs~lglG~~~~g~~~~~~~~~~~~~~~l~~A~~~Gin~~Dta~~Yg~g~se~~ig~~l~~------~ 80 (252)
|||+++| +||++||+||||||++ +.+++.++++.|+++|||+||||+.|| +|+.+|++|++ .
T Consensus 1 ~~p~~~L-~sG~~vs~lg~Gt~~~--------~~~ea~~~i~~Ald~Gin~fDTA~~YG---sE~~lG~~l~~~~~~~~~ 68 (319)
T d1mi3a_ 1 SIPDIKL-SSGHLMPSIGFGCWKL--------ANATAGEQVYQAIKAGYRLFDGAEDYG---NEKEVGDGVKRAIDEGLV 68 (319)
T ss_dssp CCCEEEC-TTSCEEESBCEECTTC--------CHHHHHHHHHHHHHTTCCEEECCGGGS---CHHHHHHHHHHHHHTTSC
T ss_pred CCCeEEc-CCCCEeccceeECCCC--------ChHHHHHHHHHHHHcCCCEEECCCccC---CHHHHHHHHHHHhhhccc
Confidence 5899999 6999999999999986 468999999999999999999999999 79999999985 4
Q ss_pred CCCCEEEEeccCccCCCCcccccCCChHHHHHHHHHHHHHcCCCcccEEEccCCCC------------------------
Q 025500 81 PREKIQVATKFGIAGIGVAGVIVKGAPDYVRSCCEASLKRLDVDYIDLYYQHRVDT------------------------ 136 (252)
Q Consensus 81 ~R~~~~i~tK~~~~~~~~~~~~~~~~~~~i~~~~~~sL~~Lg~d~iDl~~lh~~~~------------------------ 136 (252)
.+.++.+.+|..... .+++.+++++++||+||++||+|+|++|||..
T Consensus 69 ~~~~~~~~~~~~~~~---------~~~~~i~~~~~~SL~rL~~d~iDl~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (319)
T d1mi3a_ 69 KREEIFLTSKLWNNY---------HDPKNVETALNKTLADLKVDYVDLFLIHFPIAFKFVPIEEKYPPGFYCGDGNNFVY 139 (319)
T ss_dssp CGGGCEEEEEECGGG---------CSHHHHHHHHHHHHHHHTCSCEEEEEECCSCCBCCCCTTTCSSCTTCCSSTTCCCB
T ss_pred ccccccccccccccc---------ccchhhhhhhHHHHhhccccchhhhhccCccccccccccccCCccccccccccccC
Confidence 566777777765433 67999999999999999999999999998732
Q ss_pred -CCCHHHHHHHHHHHHHcCCccEEEccCCCHHHHHHHhhc--CCceEEeeecCccccchhhhHHHHHHHhCCeEEecccC
Q 025500 137 -SVPIEETIGEMKKLVEEGKIKYIGLSEASPGTIRRAHAV--HPITAVQMEWSLWTRDIEEEIIPLCRELGIGIVPYSPL 213 (252)
Q Consensus 137 -~~~~~~~~~~L~~l~~~G~ir~iGvs~~~~~~l~~~~~~--~~~~~~q~~~~~~~~~~~~~l~~~~~~~gi~v~a~spl 213 (252)
..+++++|++|++++++|+||+||+||++.+++.++... ..+.++|.+|+++++. .+++++|+++++.+++|+||
T Consensus 140 ~~~~~~e~~~~l~~l~~~Gkir~iG~S~~~~~~~~~~~~~~~~~~~~~q~~~~~~~~~--~~l~~~~~~~~i~~~a~~pl 217 (319)
T d1mi3a_ 140 EDVPILETWKALEKLVAAGKIKSIGVSNFPGALLLDLLRGATIKPAVLQVEHHPYLQQ--PKLIEFAQKAGVTITAYSSF 217 (319)
T ss_dssp CCCCHHHHHHHHHHHHHTTSEEEEEEESCCHHHHHHHHHHCSSCCCEEEEECBTTBCC--HHHHHHHHHTTCEEEEECTT
T ss_pred CCCCHHHHHHHHHHHHHCCCEeecccCCCchHHHHHHHhhcCCCchhhhccccccccc--HHHHHHHHHhhccceeccCC
Confidence 235789999999999999999999999999998888765 4578999999999885 68999999999999999999
Q ss_pred ccccCCCC
Q 025500 214 GRGFFGGK 221 (252)
Q Consensus 214 ~~G~L~~~ 221 (252)
+.|.++..
T Consensus 218 ~~~~~~~~ 225 (319)
T d1mi3a_ 218 GPQSFVEM 225 (319)
T ss_dssp TTHHHHTT
T ss_pred cccccccc
Confidence 99988754
|
| >d1mzra_ c.1.7.1 (A:) 2,5-diketo-D-gluconic acid reductase A {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: NAD(P)-linked oxidoreductase family: Aldo-keto reductases (NADP) domain: 2,5-diketo-D-gluconic acid reductase A species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=4.4e-41 Score=286.40 Aligned_cols=189 Identities=31% Similarity=0.367 Sum_probs=164.9
Q ss_pred CceecCCCCccccceeecccccCCCCCCCCCHHHHHHHHHHHHHCCCCEEeCcCCcCCCcHHHHHHHHHhc--CCCCCEE
Q 025500 9 PRVKLGTQGLEVSKLGYGCMNLSGGYSSPVSEEDGISMIKHAFSKGITFFDTADVYGQNANEVLLGKALKQ--LPREKIQ 86 (252)
Q Consensus 9 ~~~~lg~~g~~vs~lglG~~~~g~~~~~~~~~~~~~~~l~~A~~~Gin~~Dta~~Yg~g~se~~ig~~l~~--~~R~~~~ 86 (252)
...+| |+|.+||+||||||++ +.+++.++|++|+++|||+||||+.|| +|+.+|++|+. ..|++++
T Consensus 4 ~~~~l-n~G~~ip~ig~G~~~~--------~~~ea~~~l~~A~d~Gin~~DTA~~Yg---sE~~lG~~l~~~~~~~~~~~ 71 (274)
T d1mzra_ 4 TVIKL-QDGNVMPQLGLGVWQA--------SNEEVITAIQKALEVGYRSIDTAAAYK---NEEGVGKALKNASVNREELF 71 (274)
T ss_dssp CEEEC-TTSCEEESBCEECCSC--------CHHHHHHHHHHHHHHTCCEEECCGGGT---CHHHHHHHHHHSCSCGGGCE
T ss_pred CEEEC-CCCCcccCeeEECCCC--------CHHHHHHHHHHHHHcCCCEEECcCccC---CHHHHHHHhhcccccccccc
Confidence 45788 9999999999999975 579999999999999999999999998 89999999986 5789999
Q ss_pred EEeccCccCCCCcccccCCChHHHHHHHHHHHHHcCCCcccEEEccCCCCCC-CHHHHHHHHHHHHHcCCccEEEccCCC
Q 025500 87 VATKFGIAGIGVAGVIVKGAPDYVRSCCEASLKRLDVDYIDLYYQHRVDTSV-PIEETIGEMKKLVEEGKIKYIGLSEAS 165 (252)
Q Consensus 87 i~tK~~~~~~~~~~~~~~~~~~~i~~~~~~sL~~Lg~d~iDl~~lh~~~~~~-~~~~~~~~L~~l~~~G~ir~iGvs~~~ 165 (252)
|+||.... +++.+.+++++||+||++||||+|++|+++... ...++|++|++++++|+||+||+||++
T Consensus 72 i~tk~~~~-----------~~~~~~~~~~~Sl~rL~~d~iDl~~lH~~~~~~~~~~~~~~~l~~l~~~G~i~~iGvs~~~ 140 (274)
T d1mzra_ 72 ITTKLWND-----------DHKRPREALLDSLKKLQLDYIDLYLMHWPVPAIDHYVEAWKGMIELQKEGLIKSIGVCNFQ 140 (274)
T ss_dssp EEEEECGG-----------GTTCHHHHHHHHHHHHTCSCEEEEEESCCCTTTCCHHHHHHHHHHHHHTTSEEEEEEESCC
T ss_pred cccccccc-----------cchhHHHHHHHHHHhcCCCeEEEEEecCCCccchhHHHHHHHHHHHHHCCCEEEEeecccc
Confidence 99998654 356789999999999999999999999998654 456799999999999999999999999
Q ss_pred HHHHHHHhhcCCceEEeeecCccccchhhhHHHHHHHhCCeEEecccCccccCCC
Q 025500 166 PGTIRRAHAVHPITAVQMEWSLWTRDIEEEIIPLCRELGIGIVPYSPLGRGFFGG 220 (252)
Q Consensus 166 ~~~l~~~~~~~~~~~~q~~~~~~~~~~~~~l~~~~~~~gi~v~a~spl~~G~L~~ 220 (252)
.+++.++++...+..+|..++++....+..++++|+++||.|++|+||++|....
T Consensus 141 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~a~~pl~~G~~~~ 195 (274)
T d1mzra_ 141 IHHLQRLIDETGVTPVINQIELHPLMQQRQLHAWNATHKIQTESWSPLAQGGKGV 195 (274)
T ss_dssp HHHHHHHHHHHSCCCSEEEEECBTTBCCHHHHHHHHHTTCEEEEESTTTTTCTTT
T ss_pred chHHHHHHHhcCCCceeeehhhcccccchhhhhhhhhcceeEEEcChhhcCCCcc
Confidence 9999988877555555555555555545789999999999999999999996443
|
| >d1hqta_ c.1.7.1 (A:) Aldose reductase (aldehyde reductase) {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: NAD(P)-linked oxidoreductase family: Aldo-keto reductases (NADP) domain: Aldose reductase (aldehyde reductase) species: Pig (Sus scrofa) [TaxId: 9823]
Probab=100.00 E-value=1.8e-40 Score=288.84 Aligned_cols=192 Identities=27% Similarity=0.441 Sum_probs=169.1
Q ss_pred CceecCCCCccccceeecccccCCCCCCCCCHHHHHHHHHHHHHCCCCEEeCcCCcCCCcHHHHHHHHHhc-------CC
Q 025500 9 PRVKLGTQGLEVSKLGYGCMNLSGGYSSPVSEEDGISMIKHAFSKGITFFDTADVYGQNANEVLLGKALKQ-------LP 81 (252)
Q Consensus 9 ~~~~lg~~g~~vs~lglG~~~~g~~~~~~~~~~~~~~~l~~A~~~Gin~~Dta~~Yg~g~se~~ig~~l~~-------~~ 81 (252)
+.++| |||++||.||||||++ +++++.++|++|++.|||+||||+.|| +|+.+|++|+. ++
T Consensus 3 ~~~~l-ntG~~is~lglGtw~~--------~~~~a~~~l~~A~~~Gin~~DTA~~Yg---sE~~lG~al~~~~~~~~~~~ 70 (324)
T d1hqta_ 3 SCVLL-HTGQKMPLIGLGTWKS--------EPGQVKAAIKYALTVGYRHIDCAAIFG---NELEIGEALQETVGPGKAVP 70 (324)
T ss_dssp CEEEC-TTSCEEESBCBBCTTC--------CTTTHHHHHHHHHHTTCCEEECCGGGS---CHHHHHHHHTTTBSSSSSBC
T ss_pred CEEEC-CCcCEehhheeECCCC--------CHHHHHHHHHHHHHcCCCEEECccccc---CHHHHHHHHHHhhcccceee
Confidence 35666 9999999999999974 557899999999999999999999999 79999999995 57
Q ss_pred CCCEEEEeccCccCCCCcccccCCChHHHHHHHHHHHHHcCCCcccEEEccCCCC-------------------CCCHHH
Q 025500 82 REKIQVATKFGIAGIGVAGVIVKGAPDYVRSCCEASLKRLDVDYIDLYYQHRVDT-------------------SVPIEE 142 (252)
Q Consensus 82 R~~~~i~tK~~~~~~~~~~~~~~~~~~~i~~~~~~sL~~Lg~d~iDl~~lh~~~~-------------------~~~~~~ 142 (252)
|+++++++|..... .+++.+.+++++||+||++||+|++++|+|+. ..++++
T Consensus 71 r~~~~~~~~~~~~~---------~~~~~~~~~~~~SL~rl~~d~idl~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~e 141 (324)
T d1hqta_ 71 REELFVTSKLWNTK---------HHPEDVEPALRKTLADLQLEYLDLYLMHWPYAFERGDNPFPKNADGTIRYDATHYKD 141 (324)
T ss_dssp GGGCEEEEEECGGG---------CSHHHHHHHHHHHHHHHTCSCBSEEEESCSSCBCCSSCSSCEETTTEECBCCCCHHH
T ss_pred ccccccCccccccc---------chhHHHHHHHHHHHhccccceeeeecccCCcccccCCCcccccccccccccccchhh
Confidence 88999999886544 57999999999999999999999999999853 245789
Q ss_pred HHHHHHHHHHcCCccEEEccCCCHHHHHHHhhcC--CceEEeeecCccccchhhhHHHHHHHhCCeEEecccCccccCCC
Q 025500 143 TIGEMKKLVEEGKIKYIGLSEASPGTIRRAHAVH--PITAVQMEWSLWTRDIEEEIIPLCRELGIGIVPYSPLGRGFFGG 220 (252)
Q Consensus 143 ~~~~L~~l~~~G~ir~iGvs~~~~~~l~~~~~~~--~~~~~q~~~~~~~~~~~~~l~~~~~~~gi~v~a~spl~~G~L~~ 220 (252)
+|++|++|+++|+||+||+||++++++.++.... .+.++|..++..... .+++++|+++||++++|+||++|.+..
T Consensus 142 ~~~al~~l~~~G~Ir~iG~Sn~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~l~~~~~~~gi~~~~~~pl~~g~~~~ 219 (324)
T d1hqta_ 142 TWKALEALVAKGLVRALGLSNFSSRQIDDVLSVASVRPAVLQVECHPYLAQ--NELIAHCQARGLEVTAYSPLGSSDRAW 219 (324)
T ss_dssp HHHHHHHHHHTTSBSCEEEESCCHHHHHHHHTTCSSCCCEEEEECBTTBCC--HHHHHHHHHHTCEEEEESTTCCTTCSS
T ss_pred HHHHHHHHHHcCCeeeecccCCCHHHHHHHhhhcccCccccccccchhhhh--HHHHHHHHHcCCCcccccCcccccccc
Confidence 9999999999999999999999999999988774 456777777776653 689999999999999999999999887
Q ss_pred CCC
Q 025500 221 KAV 223 (252)
Q Consensus 221 ~~~ 223 (252)
++.
T Consensus 220 ~~~ 222 (324)
T d1hqta_ 220 RDP 222 (324)
T ss_dssp CCC
T ss_pred ccc
Confidence 743
|
| >d1frba_ c.1.7.1 (A:) FR-1 (fibroblast growth factor-induced) protein {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: NAD(P)-linked oxidoreductase family: Aldo-keto reductases (NADP) domain: FR-1 (fibroblast growth factor-induced) protein species: Mouse (Mus musculus) [TaxId: 10090]
Probab=100.00 E-value=4.4e-39 Score=278.78 Aligned_cols=191 Identities=25% Similarity=0.378 Sum_probs=166.4
Q ss_pred CceecCCCCccccceeecccccCCCCCCCCCHHHHHHHHHHHHHCCCCEEeCcCCcCCCcHHHHHHHHHhc------CCC
Q 025500 9 PRVKLGTQGLEVSKLGYGCMNLSGGYSSPVSEEDGISMIKHAFSKGITFFDTADVYGQNANEVLLGKALKQ------LPR 82 (252)
Q Consensus 9 ~~~~lg~~g~~vs~lglG~~~~g~~~~~~~~~~~~~~~l~~A~~~Gin~~Dta~~Yg~g~se~~ig~~l~~------~~R 82 (252)
++.+| +||++||.||||||++ +++++.++|++|+++|||+||||+.|| +|+.+|++|++ +.|
T Consensus 2 ~~~~l-~tg~~ip~iGlGtw~~--------~~~~a~~~i~~Ald~Gin~fDTA~~YG---sE~~lG~~L~~~~~~~~~~~ 69 (315)
T d1frba_ 2 TFVEL-STKAKMPIVGLGTWKS--------PPNQVKEAVKAAIDAGYRHIDCAYAYC---NENEVGEAIQEKIKEKAVQR 69 (315)
T ss_dssp CEEEC-TTSCEEESBCEECTTC--------CHHHHHHHHHHHHHTTCCEEECCGGGT---CHHHHHHHHHHHHHTTSCCG
T ss_pred CEEEC-CCCCcccccceECCCC--------CHHHHHHHHHHHHHcCCCEEEcccccc---CHHHHHHHHHHHHHhccccc
Confidence 47789 9999999999999975 689999999999999999999999999 79999999875 567
Q ss_pred CCEEEEeccCccCCCCcccccCCChHHHHHHHHHHHHHcCCCcccEEEccCCCC-------------------CCCHHHH
Q 025500 83 EKIQVATKFGIAGIGVAGVIVKGAPDYVRSCCEASLKRLDVDYIDLYYQHRVDT-------------------SVPIEET 143 (252)
Q Consensus 83 ~~~~i~tK~~~~~~~~~~~~~~~~~~~i~~~~~~sL~~Lg~d~iDl~~lh~~~~-------------------~~~~~~~ 143 (252)
+++++.+|..... .+++.+++++++||+||+++++|++++|+|+. ..+++++
T Consensus 70 ~~~~~~~~~~~~~---------~~~~~v~~~~~~sL~rl~~~~iD~~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~ 140 (315)
T d1frba_ 70 EDLFIVSKLWPTC---------FEKKLLKEAFQKTLTDLKLDYLDLYLIHWPQGLQPGKELFPKDDQGRILTSKTTFLEA 140 (315)
T ss_dssp GGCEEEEEECGGG---------CSHHHHHHHHHHHHHHHTCSCEEEEEECCSSCBCCSSCSSCBCTTSCBCBCSCCHHHH
T ss_pred ccccccccccccc---------cchHHHHHHHHHhhhcccchhhhhhhccCCCCCCCcccccccccccccccccCCHHHH
Confidence 8888888886544 57999999999999999999999999999853 2347899
Q ss_pred HHHHHHHHHcCCccEEEccCCCHHHHHHHhhc----CCceEEeeecCccccchhhhHHHHHHHhCCeEEecccCccccCC
Q 025500 144 IGEMKKLVEEGKIKYIGLSEASPGTIRRAHAV----HPITAVQMEWSLWTRDIEEEIIPLCRELGIGIVPYSPLGRGFFG 219 (252)
Q Consensus 144 ~~~L~~l~~~G~ir~iGvs~~~~~~l~~~~~~----~~~~~~q~~~~~~~~~~~~~l~~~~~~~gi~v~a~spl~~G~L~ 219 (252)
|++|++|+++|+||+||+||++.+++++++.. ..+..+|..++.... +..++++|+++|+++++|+||++|.+.
T Consensus 141 ~~~l~~l~~~G~ir~iG~s~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~--~~~l~~~~~~~~i~~~~~~pl~~g~~~ 218 (315)
T d1frba_ 141 WEGMEELVDQGLVKALGVSNFNHFQIERLLNKPGLKHKPVTNQVECHPYLT--QEKLIQYCHSKGISVTAYSPLGSPDRP 218 (315)
T ss_dssp HHHHHHHHHTTSEEEEEEESCCHHHHHHHHTCTTCCSCCCEEEEECBTTBC--CHHHHHHHHHTTCEEEEESTTCCTTST
T ss_pred HHHHHHHHHCCCccccccccccHHHHHHHHHHhhhcccccccccccCchhh--hHHHHHHHHHcCCcccccccccccccc
Confidence 99999999999999999999999999988765 244566666665544 478999999999999999999999888
Q ss_pred CCC
Q 025500 220 GKA 222 (252)
Q Consensus 220 ~~~ 222 (252)
...
T Consensus 219 ~~~ 221 (315)
T d1frba_ 219 SAK 221 (315)
T ss_dssp TCC
T ss_pred ccc
Confidence 763
|
| >d1vp5a_ c.1.7.1 (A:) 2,5-diketo-D-gluconic acid reductase A {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: NAD(P)-linked oxidoreductase family: Aldo-keto reductases (NADP) domain: 2,5-diketo-D-gluconic acid reductase A species: Thermotoga maritima [TaxId: 2336]
Probab=100.00 E-value=1.8e-39 Score=277.64 Aligned_cols=186 Identities=28% Similarity=0.433 Sum_probs=166.1
Q ss_pred cCceecCCCCccccceeecccccCCCCCCCCCHHHHHHHHHHHHHCCCCEEeCcCCcCCCcHHHHHHHHHhc------CC
Q 025500 8 VPRVKLGTQGLEVSKLGYGCMNLSGGYSSPVSEEDGISMIKHAFSKGITFFDTADVYGQNANEVLLGKALKQ------LP 81 (252)
Q Consensus 8 m~~~~lg~~g~~vs~lglG~~~~g~~~~~~~~~~~~~~~l~~A~~~Gin~~Dta~~Yg~g~se~~ig~~l~~------~~ 81 (252)
.|++.| +||++||+||||||++ +.+++.++|+.|+++||||||||+.|| +|+.+|++|+. ..
T Consensus 2 ip~~~l-~tG~~vs~iglGt~~~--------~~~~~~~~i~~A~d~Gin~~DTA~~Yg---sE~~~G~~l~~~~~~~~~~ 69 (284)
T d1vp5a_ 2 VPKVTL-NNGVEMPILGYGVFQI--------PPEKTEECVYEAIKVGYRLIDTAASYM---NEEGVGRAIKRAIDEGIVR 69 (284)
T ss_dssp CCEEEC-TTSCEEESBCEECTTC--------CHHHHHHHHHHHHHHTCCEEECCGGGT---CHHHHHHHHHHHHHTTSCC
T ss_pred CCeEEC-CCCCEecceeeECCCC--------CHHHHHHHHHHHHHcCCCEEEcCcccC---CHHHHHHHHHhhhcccccc
Confidence 578899 7999999999999986 578999999999999999999999999 79999999986 57
Q ss_pred CCCEEEEeccCccCCCCcccccCCChHHHHHHHHHHHHHcCCCcccEEEccCCCCCCCHHHHHHHHHHHHHcCCccEEEc
Q 025500 82 REKIQVATKFGIAGIGVAGVIVKGAPDYVRSCCEASLKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGL 161 (252)
Q Consensus 82 R~~~~i~tK~~~~~~~~~~~~~~~~~~~i~~~~~~sL~~Lg~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~G~ir~iGv 161 (252)
|+++++++|.+... .+++.+++++++||+|||+||+|++++|+|+. ..++++++|++||++|+||+||+
T Consensus 70 ~~~~~i~~~~~~~~---------~~~~~~~~~~~~SL~rL~~d~iD~~~~H~p~~--~~~~~~~al~~l~~~GkIr~iGv 138 (284)
T d1vp5a_ 70 REELFVTTKLWVSD---------VGYESTKKAFEKSLKKLQLEYIDLYLIHQPFG--DVHCAWKAMEEMYKDGLVRAIGV 138 (284)
T ss_dssp GGGCEEEEEECGGG---------CSSHHHHHHHHHHHHHHTCSCEEEEEECSSCS--CHHHHHHHHHHHHHTTSEEEEEE
T ss_pred cccccccccccccc---------cCcHHHHHHHHHHHHHhccCchhhhhcccccc--chhhHHHHHHHHhhCCeEeEEee
Confidence 89999999987644 67899999999999999999999999999874 57899999999999999999999
Q ss_pred cCCCHHHHHHHhhc--CCceEEeeecCccccchhhhHHHHHHHhCCeEEecccCccccC
Q 025500 162 SEASPGTIRRAHAV--HPITAVQMEWSLWTRDIEEEIIPLCRELGIGIVPYSPLGRGFF 218 (252)
Q Consensus 162 s~~~~~~l~~~~~~--~~~~~~q~~~~~~~~~~~~~l~~~~~~~gi~v~a~spl~~G~L 218 (252)
|||+++++.++... ..+..+|+.++.+... ..+++.|+++|+.+++|+|+..+..
T Consensus 139 Sn~~~~~~~~~~~~~~~~~~~~q~~~~~~~~~--~~~~~~~~~~g~~~~~~~p~~~~~~ 195 (284)
T d1vp5a_ 139 SNFYPDRLMDLMVHHEIVPAVNQIEIHPFYQR--QEEIEFMRNYNIQPEAWGPFAEGRK 195 (284)
T ss_dssp ESCCHHHHHHHHHHCSSCCSEEEEECBTTBCC--HHHHHHHHHTTCEEEEESTTGGGGG
T ss_pred ccCCHHHHHHHHhhccCCCchhhhhhhhhhhh--HHHHHHHHHcCCcccccCCcccccc
Confidence 99999999888765 4567777777776664 6789999999999999999987753
|
| >d1jpma1 c.1.11.2 (A:126-359) L-Ala-D/L-Glu epimerase {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: Enolase C-terminal domain-like family: D-glucarate dehydratase-like domain: L-Ala-D/L-Glu epimerase species: Bacillus subtilis [TaxId: 1423]
Probab=94.31 E-value=0.48 Score=36.32 Aligned_cols=157 Identities=8% Similarity=0.068 Sum_probs=98.6
Q ss_pred CHHHHHHHHHHHHHCCCCEEeCcCCcCCCcHH---HHHHHHHhcCCCCCEEEEeccCccCCCCcccccCCChHHHHHHHH
Q 025500 39 SEEDGISMIKHAFSKGITFFDTADVYGQNANE---VLLGKALKQLPREKIQVATKFGIAGIGVAGVIVKGAPDYVRSCCE 115 (252)
Q Consensus 39 ~~~~~~~~l~~A~~~Gin~~Dta~~Yg~g~se---~~ig~~l~~~~R~~~~i~tK~~~~~~~~~~~~~~~~~~~i~~~~~ 115 (252)
++++..+.++.+++.|++.|=.-- |...-+ +.+. ++++.--+++.|..=.- ..++.+.. .
T Consensus 15 ~pe~~~~~a~~~~~~G~~~~Kiki--g~~~~~~d~~~i~-~ir~~~g~~~~i~vD~N----------~~~~~~~a----~ 77 (234)
T d1jpma1 15 SPEEMAADAENYLKQGFQTLKIKV--GKDDIATDIARIQ-EIRKRVGSAVKLRLDAN----------QGWRPKEA----V 77 (234)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEEEC--SSSCHHHHHHHHH-HHHHHHGGGSEEEEECT----------TCSCHHHH----H
T ss_pred CHHHHHHHHHHHHHCCCCEEEEEC--CCCCHHHHHHHHH-HHHHHcCchhhhhhhcc----------cccchHHH----H
Confidence 579999999999999999876421 111112 2222 22221112333322211 12344433 3
Q ss_pred HHHHHcCCCcccEEEccCCCCCCCHHHHHHHHHHHHHcCCc-cEEEccCCCHHHHHHHhhcCCceEEeeecCccccc-hh
Q 025500 116 ASLKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKI-KYIGLSEASPGTIRRAHAVHPITAVQMEWSLWTRD-IE 193 (252)
Q Consensus 116 ~sL~~Lg~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~G~i-r~iGvs~~~~~~l~~~~~~~~~~~~q~~~~~~~~~-~~ 193 (252)
+.++.|....++++++..|-...+ ++.+.+++++-.+ -..|=+-++...+.++++....+++|+..+..-.- .-
T Consensus 78 ~~~~~le~~~~~i~~~EeP~~~~d----~~~~~~l~~~~~~pia~gE~~~~~~~~~~~i~~~~~d~v~~d~~~~GGit~~ 153 (234)
T d1jpma1 78 TAIRKMEDAGLGIELVEQPVHKDD----LAGLKKVTDATDTPIMADESVFTPRQAFEVLQTRSADLINIKLMKAGGISGA 153 (234)
T ss_dssp HHHHHHHHTTCCEEEEECCSCTTC----HHHHHHHHHHCSSCEEESTTCSSHHHHHHHHHTTCCSEEEECHHHHTSHHHH
T ss_pred HHHHHHHhccCceeeecCCccccC----HHHHHHhhccccceeecccccccchhhhhhhccCCcCeEEEeeecCCCHHHH
Confidence 344444433467889988865433 6777888877554 45566778889999999888899999987654321 12
Q ss_pred hhHHHHHHHhCCeEEecccCccc
Q 025500 194 EEIIPLCRELGIGIVPYSPLGRG 216 (252)
Q Consensus 194 ~~l~~~~~~~gi~v~a~spl~~G 216 (252)
..+.+.|+++|+.++..+.++++
T Consensus 154 ~~i~~~a~~~g~~~~~~~~~~~~ 176 (234)
T d1jpma1 154 EKINAMAEACGVECMVGSMIETK 176 (234)
T ss_dssp HHHHHHHHHTTCCEEECCSSCCH
T ss_pred HHHHHHHHhcCeeEeecccccCC
Confidence 77999999999999888766655
|
| >d1sjda1 c.1.11.2 (A:126-367) N-acylamino acid racemase {Amycolatopsis sp. [TaxId: 37632]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: Enolase C-terminal domain-like family: D-glucarate dehydratase-like domain: N-acylamino acid racemase species: Amycolatopsis sp. [TaxId: 37632]
Probab=94.26 E-value=0.23 Score=38.47 Aligned_cols=154 Identities=10% Similarity=0.043 Sum_probs=99.7
Q ss_pred CHHHHHHHHHHHHHCCCCEEeCcCCcCCCcHHHHHHHHHhcCCCCCEEEEeccCccCCCCcccccCCChHHHHHHHHHHH
Q 025500 39 SEEDGISMIKHAFSKGITFFDTADVYGQNANEVLLGKALKQLPREKIQVATKFGIAGIGVAGVIVKGAPDYVRSCCEASL 118 (252)
Q Consensus 39 ~~~~~~~~l~~A~~~Gin~~Dta~~Yg~g~se~~ig~~l~~~~R~~~~i~tK~~~~~~~~~~~~~~~~~~~i~~~~~~sL 118 (252)
+.++..+.++.+++.|++.|=.-- |.....+.+ +++++.-.+++.|..-.... ++.+...+ +
T Consensus 16 ~~~~~~~~~~~~~~~Gf~~~Kikv--g~~~Di~~i-~~ir~~~g~~~~l~vDaN~~----------~~~~~a~~-~---- 77 (242)
T d1sjda1 16 TIPQLLDVVGGYLDEGYVRIKLKI--EPGWDVEPV-RAVRERFGDDVLLQVDANTA----------YTLGDAPQ-L---- 77 (242)
T ss_dssp CHHHHHHHHHHHHHHTCSEEEEEC--BTTBSHHHH-HHHHHHHCTTSEEEEECTTC----------CCGGGHHH-H----
T ss_pred CHHHHHHHHHHHHHcCCCEEEEEC--CchhHHHHH-HHHHHHhCCCeeEeeccccc----------cchhhhhH-H----
Confidence 678899999999999999854332 222233333 34444223444444443221 23333222 2
Q ss_pred HHcCCCcccEEEccCCCCCCCHHHHHHHHHHHHHcCCcc-EEEccCCCHHHHHHHhhcCCceEEeeecCccccch-hhhH
Q 025500 119 KRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIK-YIGLSEASPGTIRRAHAVHPITAVQMEWSLWTRDI-EEEI 196 (252)
Q Consensus 119 ~~Lg~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~G~ir-~iGvs~~~~~~l~~~~~~~~~~~~q~~~~~~~~~~-~~~l 196 (252)
.+| +..+++++..|-...+ +..+.++++...+. +.|=+.++...+.++++...++++|+..+..-.-. ...+
T Consensus 78 ~~l--~~~~~~~iEeP~~~~d----~~~~~~l~~~~~~pia~gE~~~~~~~~~~~~~~~~~d~~~~d~~~~GGit~~~~i 151 (242)
T d1sjda1 78 ARL--DPFGLLLIEQPLEEED----VLGHAELARRIQTPICLDESIVSARAAADAIKLGAVQIVNIKPGRVGGYLEARRV 151 (242)
T ss_dssp HTT--GGGCCSEEECCSCTTC----HHHHHHHHTTCSSCEEESTTCCSHHHHHHHHHTTCCSEEEECTTTTTSHHHHHHH
T ss_pred hhh--hhhhhHHHHhhhhhhh----HHHHHHHHhccCcccccccccccchhhhhhhhcCccCEEEeccccCccchhhhHH
Confidence 233 3456778888855433 56677888776665 34556689999999999888999999887654321 2789
Q ss_pred HHHHHHhCCeEEecccCccc
Q 025500 197 IPLCRELGIGIVPYSPLGRG 216 (252)
Q Consensus 197 ~~~~~~~gi~v~a~spl~~G 216 (252)
.+.|+++|+.+...+....+
T Consensus 152 ~~~A~~~~i~~~~h~~~~~~ 171 (242)
T d1sjda1 152 HDVCAAHGIPVWCGGMIETG 171 (242)
T ss_dssp HHHHHHTTCCEEECCCCCCH
T ss_pred HHHHHHCCCEEeecccccch
Confidence 99999999999988876654
|
| >d2chra1 c.1.11.2 (A:127-370) Chlormuconate cycloisomerase {Alcaligenes eutrophus [TaxId: 106590]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: Enolase C-terminal domain-like family: D-glucarate dehydratase-like domain: Chlormuconate cycloisomerase species: Alcaligenes eutrophus [TaxId: 106590]
Probab=93.39 E-value=0.58 Score=36.20 Aligned_cols=157 Identities=9% Similarity=0.034 Sum_probs=97.9
Q ss_pred CHHHHHHHHHHHHHCCCCEEeCcCCcCCCc-HHHHHHHHHhcCCCCCEEEEeccCccCCCCcccccCCChHHHHHHHHHH
Q 025500 39 SEEDGISMIKHAFSKGITFFDTADVYGQNA-NEVLLGKALKQLPREKIQVATKFGIAGIGVAGVIVKGAPDYVRSCCEAS 117 (252)
Q Consensus 39 ~~~~~~~~l~~A~~~Gin~~Dta~~Yg~g~-se~~ig~~l~~~~R~~~~i~tK~~~~~~~~~~~~~~~~~~~i~~~~~~s 117 (252)
++++..+..+...+.|++.|=.--...+-. ..+.+ +++++.-.+++.|..-... .++.+...+-+ +.
T Consensus 17 ~~~~~~~~~~~~~~~Gf~~~KiKvG~~~~~~D~~~v-~~ir~~~g~~~~l~vDaN~----------~~~~~~A~~~~-~~ 84 (244)
T d2chra1 17 TKRDLDSAVEMIERRRHNRFKVKLGFRSPQDDLIHM-EALSNSLGSKAYLRVDVNQ----------AWDEQVASVYI-PE 84 (244)
T ss_dssp HHHHHHHHHHHHHTTSCCEEEEECSSSCHHHHHHHH-HHHHHHTTTTSEEEEECTT----------CCCTHHHHHHH-HH
T ss_pred cHHHHHHHHHHHHhCCCCEEEEEcCCCCHHHHHHHH-HHHHHhcCCCceEEEeCCC----------CcchHHHHHHH-HH
Confidence 467777788888888999887632221101 12223 3444422344444433221 23454444333 34
Q ss_pred HHHcCCCcccEEEccCCCCCCCHHHHHHHHHHHHHcCCcc-EEEccCCCHHHHHHHhhcCCceEEeeecCccccc-hhhh
Q 025500 118 LKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIK-YIGLSEASPGTIRRAHAVHPITAVQMEWSLWTRD-IEEE 195 (252)
Q Consensus 118 L~~Lg~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~G~ir-~iGvs~~~~~~l~~~~~~~~~~~~q~~~~~~~~~-~~~~ 195 (252)
|+.+ +++++..|-...+ ++.+.+++++-.+. +.|=+-++.+.+.++++....+++|+..+..-.- ....
T Consensus 85 l~~~-----~i~~iEeP~~~~d----~~~~~~l~~~~~ipia~~E~~~~~~~~~~~i~~~~~d~v~~d~~~~GGit~~~~ 155 (244)
T d2chra1 85 LEAL-----GVELIEQPVGREN----TQALRRLSDNNRVAIMADESLSTLASAFDLARDRSVDVFSLKLCNMGGVSATQK 155 (244)
T ss_dssp HHTT-----TCCEEECCSCSSC----HHHHHHHHHHCSSEEEESSSCCSHHHHHHHHTTTCCSEECCCHHHHTSHHHHHH
T ss_pred Hhhh-----hHHHHhhhhhhcc----chhhhhhccceeeeeeecccccccchhhhhhhcceeEEEeeccccccchHHHHH
Confidence 5544 4567777754333 66778888775544 4466668999999999888899999987654321 1278
Q ss_pred HHHHHHHhCCeEEecccCccc
Q 025500 196 IIPLCRELGIGIVPYSPLGRG 216 (252)
Q Consensus 196 l~~~~~~~gi~v~a~spl~~G 216 (252)
+.+.|+++|+.++..+...++
T Consensus 156 i~~~a~~~gi~~~~~~~~~~~ 176 (244)
T d2chra1 156 IAAVAEASGIASYGGTMLDST 176 (244)
T ss_dssp HHHHHHHHTCEECCCCCSCCH
T ss_pred HHHHHHHcCCCeeeccccccc
Confidence 999999999999877777654
|
| >d1r0ma1 c.1.11.2 (A:133-375) N-acylamino acid racemase {Deinococcus radiodurans [TaxId: 1299]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: Enolase C-terminal domain-like family: D-glucarate dehydratase-like domain: N-acylamino acid racemase species: Deinococcus radiodurans [TaxId: 1299]
Probab=93.34 E-value=0.74 Score=35.39 Aligned_cols=152 Identities=13% Similarity=0.119 Sum_probs=98.4
Q ss_pred CHHHHHHHHHHHHHCCCCEEeCcCCcCCCcHHHHHHHHHhc-CCCCCEEEEeccCccCCCCcccccCCChHHHHHHHHHH
Q 025500 39 SEEDGISMIKHAFSKGITFFDTADVYGQNANEVLLGKALKQ-LPREKIQVATKFGIAGIGVAGVIVKGAPDYVRSCCEAS 117 (252)
Q Consensus 39 ~~~~~~~~l~~A~~~Gin~~Dta~~Yg~g~se~~ig~~l~~-~~R~~~~i~tK~~~~~~~~~~~~~~~~~~~i~~~~~~s 117 (252)
++++..+.++.+++.|++.|=.-- |.+...+.+. ++++ ++.-.+.| -.-. .++.+...+ +
T Consensus 16 ~~e~~~~~~~~~~~~G~~~~KiKv--g~~~D~~~v~-~ir~~~~d~~l~v--D~n~----------~~~~~~a~~-~--- 76 (243)
T d1r0ma1 16 DEQATVDLVRRHVEQGYRRIKLKI--KPGWDVQPVR-ATREAFPDIRLTV--DANS----------AYTLADAGR-L--- 76 (243)
T ss_dssp SHHHHHHHHHHHHHTTCSCEEEEC--BTTBSHHHHH-HHHHHCTTSCEEE--ECTT----------CCCGGGHHH-H---
T ss_pred CHHHHHHHHHHHHHcCCCEEEEEc--CcchhHHHHH-HHHHhccCceEEE--eccc----------cCchHHHHH-h---
Confidence 788889999999999999765431 2233344454 4454 54322322 1111 123333221 2
Q ss_pred HHHcCCCcccEEEccCCCCCCCHHHHHHHHHHHHHcCCcc-EEEccCCCHHHHHHHhhcCCceEEeeecCccccch-hhh
Q 025500 118 LKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIK-YIGLSEASPGTIRRAHAVHPITAVQMEWSLWTRDI-EEE 195 (252)
Q Consensus 118 L~~Lg~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~G~ir-~iGvs~~~~~~l~~~~~~~~~~~~q~~~~~~~~~~-~~~ 195 (252)
..| .-.+++++..|-... .++.+.+++++-.+. +.|=+.++...+.++++...++++|+..+..-.-. -..
T Consensus 77 -~~l--~~~~~~~iEeP~~~~----d~~~~~~l~~~~~ipia~gE~~~~~~~~~~~i~~~~~d~v~~d~~~~GGit~~~~ 149 (243)
T d1r0ma1 77 -RQL--DEYDLTYIEQPLAWD----DLVDHAELARRIRTPLCLDESVASASDARKALALGAGGVINLKVARVGGHAESRR 149 (243)
T ss_dssp -HTT--GGGCCSCEECCSCTT----CSHHHHHHHHHCSSCEEESTTCCSHHHHHHHHHHTSCSEEEECTTTTTSHHHHHH
T ss_pred -hhh--hhccchhhhhhcccc----chHHHHHHhhcCCcccccccchhhhhhhhhhhhcccccceecccceeccHHHHHH
Confidence 222 334666777775443 356677777765444 45666788999999998889999999987655322 278
Q ss_pred HHHHHHHhCCeEEecccCccc
Q 025500 196 IIPLCRELGIGIVPYSPLGRG 216 (252)
Q Consensus 196 l~~~~~~~gi~v~a~spl~~G 216 (252)
+.+.|+++|+.++..+.++++
T Consensus 150 i~~~A~~~gi~v~~h~~~~~~ 170 (243)
T d1r0ma1 150 VHDVAQSFGAPVWCGGMLESG 170 (243)
T ss_dssp HHHHHHHTTCCEEECCCCCCH
T ss_pred HHHHHHHCCCceecccccccc
Confidence 999999999999999887655
|
| >d1kkoa1 c.1.11.2 (A:161-411) beta-Methylaspartase {Citrobacter amalonaticus [TaxId: 35703]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: Enolase C-terminal domain-like family: D-glucarate dehydratase-like domain: beta-Methylaspartase species: Citrobacter amalonaticus [TaxId: 35703]
Probab=92.62 E-value=0.76 Score=35.92 Aligned_cols=104 Identities=11% Similarity=0.024 Sum_probs=72.5
Q ss_pred CCChHHHHHHHHHHHHHcCCCcccEEEccCCCCCCCHHHHHHHHHHHHHc----CC-c-cEEEccCCCHHHHHHHhhcCC
Q 025500 104 KGAPDYVRSCCEASLKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEE----GK-I-KYIGLSEASPGTIRRAHAVHP 177 (252)
Q Consensus 104 ~~~~~~i~~~~~~sL~~Lg~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~----G~-i-r~iGvs~~~~~~l~~~~~~~~ 177 (252)
.++++...+.+.+. .+...+| ++ ++..|-+..+.++-|+.|.++++. |. | -..+=+-++.+.+.++++...
T Consensus 88 ~~~~~~ai~~l~~L-~~~~~~~-~l-~IEqP~~~~~~~~d~~gl~~l~~~l~~~g~~vpI~~DE~~~t~~d~~~~i~~~a 164 (251)
T d1kkoa1 88 DMDPVRCAEYIASL-EKEAQGL-PL-YIEGPVDAGNKPDQIRMLTAITKELTRLGSGVKIVADEWCNTYQDIVDFTDAGS 164 (251)
T ss_dssp TTCHHHHHHHHHHT-GGGGTTS-CE-EEECCCCCSSHHHHHHHHHHHHHHHHHHTCCCEEEECTTCCSHHHHHHHHHTTC
T ss_pred CCCHHHHHHHHHHH-HHhcCCC-ce-eecCCcccccchHHHHHHHHHHHHHhccCCCceEeccceeCCHHHHHHHHHhCC
Confidence 35666666554433 3334445 45 688887666677778888777654 32 3 233455578889999998888
Q ss_pred ceEEeeecCccccchh-hhHHHHHHHhCCeEEec
Q 025500 178 ITAVQMEWSLWTRDIE-EEIIPLCRELGIGIVPY 210 (252)
Q Consensus 178 ~~~~q~~~~~~~~~~~-~~l~~~~~~~gi~v~a~ 210 (252)
.+++|+..+-.-.-.+ .+++.+|+++|+.++.-
T Consensus 165 ~d~v~iK~~k~GGi~~a~~~~~~A~~~Gi~~~~g 198 (251)
T d1kkoa1 165 CHMVQIKTPDLGGIHNIVDAVLYCNKHGMEAYQG 198 (251)
T ss_dssp CSEEEECGGGGSSTHHHHHHHHHHHHHTCEEEEC
T ss_pred ccceeccccccCCHHHHHHHHHHHHHCCCeEEEe
Confidence 9999999887554323 78999999999998744
|
| >d1kcza1 c.1.11.2 (A:161-413) beta-Methylaspartase {Clostridium tetanomorphum [TaxId: 1553]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: Enolase C-terminal domain-like family: D-glucarate dehydratase-like domain: beta-Methylaspartase species: Clostridium tetanomorphum [TaxId: 1553]
Probab=92.20 E-value=1 Score=35.14 Aligned_cols=104 Identities=12% Similarity=0.023 Sum_probs=74.1
Q ss_pred CCChHHHHHHHHHHHHHcCCCcccEEEccCCCCCCCHHHHHHHHHHHHHc----C--CccEEEccCCCHHHHHHHhhcCC
Q 025500 104 KGAPDYVRSCCEASLKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEE----G--KIKYIGLSEASPGTIRRAHAVHP 177 (252)
Q Consensus 104 ~~~~~~i~~~~~~sL~~Lg~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~----G--~ir~iGvs~~~~~~l~~~~~~~~ 177 (252)
.++++...+-+. .|.+...+| ++ ++..|-...+..+.++.|.++++. | .--..+=+-++.+.+.++++...
T Consensus 88 ~~~~~eai~~~~-~L~~~~~~y-~i-~iEqP~~~~d~~~~~e~~a~lr~~~~~~g~~vpI~~DE~~~~~~d~~~~i~~~a 164 (253)
T d1kcza1 88 DVDIKAMADYIQ-TLAEAAKPF-HL-RIEGPMDVEDRQKQMEAMRDLRAELDGRGVDAELVADEWCNTVEDVKFFTDNKA 164 (253)
T ss_dssp TTCHHHHHHHHH-HHHHHHTTS-CE-EEECSBCCSSHHHHHHHHHHHHHHHHHHTCCEEEEECTTCCSHHHHHHHHHTTC
T ss_pred CCCHHHHHHHHH-HHHHhcCCC-Cc-eEecCCCCccHhhHHHHHHHHHHHHhccCCccceeccccccCHHHHHHHHHhCC
Confidence 356666664444 445555556 55 689997777777778888888765 2 22333446688899999999888
Q ss_pred ceEEeeecCccccchh-hhHHHHHHHhCCeEEec
Q 025500 178 ITAVQMEWSLWTRDIE-EEIIPLCRELGIGIVPY 210 (252)
Q Consensus 178 ~~~~q~~~~~~~~~~~-~~l~~~~~~~gi~v~a~ 210 (252)
.+++|+..+-.-.-.+ .+++..|+++|+.++.-
T Consensus 165 ~d~v~iK~~k~GGi~~al~~~~~a~~~Gi~~~vg 198 (253)
T d1kcza1 165 GHMVQIKTPDLGGVNNIADAIMYCKANGMGAYCG 198 (253)
T ss_dssp SSEEEECTGGGSSTHHHHHHHHHHHHTTCEEEEC
T ss_pred cCeeeccccccCCHHHHHHHHHHHHHcCCcEEEc
Confidence 9999999886543222 78999999999998854
|
| >d1wuea1 c.1.11.2 (A:1127-1367) N-acylamino acid racemase {Enterococcus faecalis [TaxId: 1351]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: Enolase C-terminal domain-like family: D-glucarate dehydratase-like domain: N-acylamino acid racemase species: Enterococcus faecalis [TaxId: 1351]
Probab=91.95 E-value=1.6 Score=33.30 Aligned_cols=152 Identities=13% Similarity=0.052 Sum_probs=96.9
Q ss_pred CHHHHHHHHHHHHHCCCCEEeCcCCcCCCcHHHHHHHHHhc-CCCCCEEEEeccCccCCCCcccccCCChHHHHHHHHHH
Q 025500 39 SEEDGISMIKHAFSKGITFFDTADVYGQNANEVLLGKALKQ-LPREKIQVATKFGIAGIGVAGVIVKGAPDYVRSCCEAS 117 (252)
Q Consensus 39 ~~~~~~~~l~~A~~~Gin~~Dta~~Yg~g~se~~ig~~l~~-~~R~~~~i~tK~~~~~~~~~~~~~~~~~~~i~~~~~~s 117 (252)
+.++..+.++.+++.|++.|=.-- |.+...+.+ +++++ .+. +.+..=.- ..++.+... .+
T Consensus 16 ~~~~~~~~~~~~~~~G~~~~Kikv--g~~~D~~~v-~~ir~~~~d--~~l~vDaN----------~~~~~~~a~-~~--- 76 (241)
T d1wuea1 16 DLPQLLKQVQLAVEKGYQRVKLKI--RPGYDVEPV-ALIRQHFPN--LPLMVDAN----------SAYTLADLP-QL--- 76 (241)
T ss_dssp CHHHHHHHHHHHHHTTCSCEEEEC--BTTBSHHHH-HHHHHHCTT--SCEEEECT----------TCCCGGGHH-HH---
T ss_pred CHHHHHHHHHHHHHCCCCEEEEEc--CccHHHHHH-HHHHHhccc--cceeeccc----------ccCCHHHhh-hh---
Confidence 678889999999999999765431 222233344 44554 432 33321111 113333332 12
Q ss_pred HHHcCCCcccEEEccCCCCCCCHHHHHHHHHHHHHcCCcc-EEEccCCCHHHHHHHhhcCCceEEeeecCccccc-hhhh
Q 025500 118 LKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIK-YIGLSEASPGTIRRAHAVHPITAVQMEWSLWTRD-IEEE 195 (252)
Q Consensus 118 L~~Lg~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~G~ir-~iGvs~~~~~~l~~~~~~~~~~~~q~~~~~~~~~-~~~~ 195 (252)
.++ .-.+++++..|-... .++.+.++++.-.+. +.|=+-++...+..+++...++++|+..+..-.- ....
T Consensus 77 -~~~--~~~~i~~iEeP~~~~----~~~~~~~l~~~~~~pIa~gE~~~~~~~~~~~i~~~~~d~i~~d~~~~GGit~~~~ 149 (241)
T d1wuea1 77 -QRL--DHYQLAMIEQPFAAD----DFLDHAQLQRELKTRICLDENIRSLKDCQVALALGSCRSINLKIPRVGGIHEALK 149 (241)
T ss_dssp -HGG--GGSCCSCEECCSCTT----CSHHHHHHHTTCSSCEEECTTCCSHHHHHHHHHHTCCSEEEECHHHHTSHHHHHH
T ss_pred -hhh--hhhhhhhhcCccccc----chhhhhhhhcccccccccCcccccchhhhhhhhhhhhhhhccccccccCcHHHHH
Confidence 333 124677777775433 366788888886664 3466678999999999988899999987654322 1278
Q ss_pred HHHHHHHhCCeEEecccCccc
Q 025500 196 IIPLCRELGIGIVPYSPLGRG 216 (252)
Q Consensus 196 l~~~~~~~gi~v~a~spl~~G 216 (252)
+.+.|+++|+.++..+....+
T Consensus 150 i~~~a~~~~i~v~~~~~~~~~ 170 (241)
T d1wuea1 150 IAAFCQENDLLVWLGGMFESG 170 (241)
T ss_dssp HHHHHHHTTCEEEECCCCCCH
T ss_pred HHHHHHHcCCEEEeccccccc
Confidence 999999999999988766544
|
| >d1nu5a1 c.1.11.2 (A:127-369) Chlormuconate cycloisomerase {Pseudomonas sp. p51 [TaxId: 65067]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: Enolase C-terminal domain-like family: D-glucarate dehydratase-like domain: Chlormuconate cycloisomerase species: Pseudomonas sp. p51 [TaxId: 65067]
Probab=91.56 E-value=1.7 Score=33.30 Aligned_cols=157 Identities=10% Similarity=0.031 Sum_probs=96.2
Q ss_pred CHHHHHHHHHHHHHCCCCEEeCcCCcCCC-cHHHHHHHHHhcCCCCCEEEEeccCccCCCCcccccCCChHHHHHHHHHH
Q 025500 39 SEEDGISMIKHAFSKGITFFDTADVYGQN-ANEVLLGKALKQLPREKIQVATKFGIAGIGVAGVIVKGAPDYVRSCCEAS 117 (252)
Q Consensus 39 ~~~~~~~~l~~A~~~Gin~~Dta~~Yg~g-~se~~ig~~l~~~~R~~~~i~tK~~~~~~~~~~~~~~~~~~~i~~~~~~s 117 (252)
++++..+.++...+.|++.|=.--...+- ...+.+ +++++.-.+++.+..-... .++.+...+ +-+.
T Consensus 17 ~~~~~~e~~~~~~~~G~~~~KiKvG~~~~~~Di~~v-~~ir~~~g~~~~l~vDaN~----------~~~~~~A~~-~~~~ 84 (243)
T d1nu5a1 17 TARDIDSALEMIETRRHNRFKVKLGARTPAQDLEHI-RSIVKAVGDRASVRVDVNQ----------GWDEQTASI-WIPR 84 (243)
T ss_dssp HHHHHHHHHHHHHTTSCSEEEEECSSSCHHHHHHHH-HHHHHHHGGGCEEEEECTT----------CCCHHHHHH-HHHH
T ss_pred hHHHHHHHHHHHHhCCCCEEEEEeCCCCHHHHHHHH-HHHHHHhCcccceEEECCC----------CccchhHHH-HHHH
Confidence 46677777777777899998753211110 112222 3333322234444322211 245555443 3344
Q ss_pred HHHcCCCcccEEEccCCCCCCCHHHHHHHHHHHHHcCCcc-EEEccCCCHHHHHHHhhcCCceEEeeecCccccch-hhh
Q 025500 118 LKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIK-YIGLSEASPGTIRRAHAVHPITAVQMEWSLWTRDI-EEE 195 (252)
Q Consensus 118 L~~Lg~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~G~ir-~iGvs~~~~~~l~~~~~~~~~~~~q~~~~~~~~~~-~~~ 195 (252)
|+.+ +++++..|-...+ ++.+.+++++-.+. ..|=+-++...+..+++....+++|+..+..-.-. -..
T Consensus 85 l~~~-----~~~~iEeP~~~~~----~~~~~~l~~~~~ipIa~gE~~~~~~~~~~~i~~~~~d~~~~d~~~~GGit~~~~ 155 (243)
T d1nu5a1 85 LEEA-----GVELVEQPVPRAN----FGALRRLTEQNGVAILADESLSSLSSAFELARDHAVDAFSLKLCNMGGIANTLK 155 (243)
T ss_dssp HHHH-----TCCEEECCSCTTC----HHHHHHHHHHCSSEEEESTTCCSHHHHHHHHHTTCCSEEEECHHHHTSHHHHHH
T ss_pred hcch-----hhhhhhhhhhhcc----ccccccchhccccccccccccccchhhhhccccccccccccccccccchHHHHH
Confidence 4555 4556777654433 56788888776653 34666688999999998888999999876543211 278
Q ss_pred HHHHHHHhCCeEEecccCccc
Q 025500 196 IIPLCRELGIGIVPYSPLGRG 216 (252)
Q Consensus 196 l~~~~~~~gi~v~a~spl~~G 216 (252)
+...|+++||.++..+.++.+
T Consensus 156 i~~~a~~~gi~~~~~~~~~s~ 176 (243)
T d1nu5a1 156 VAAVAEAAGISSYGGTMLDST 176 (243)
T ss_dssp HHHHHHHHTCEEEECCSSCCH
T ss_pred HHHHHHHcCCCcccccccchh
Confidence 999999999999988877654
|
| >d1wufa1 c.1.11.2 (A:1127-1370) N-acylamino acid racemase {Listeria innocua [TaxId: 1642]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: Enolase C-terminal domain-like family: D-glucarate dehydratase-like domain: N-acylamino acid racemase species: Listeria innocua [TaxId: 1642]
Probab=91.18 E-value=1.9 Score=32.97 Aligned_cols=152 Identities=15% Similarity=0.127 Sum_probs=99.2
Q ss_pred CHHHHHHHHHHHHHCCCCEEeCcCCcCCCcHHHHHHHHHhc-CCCCCEEEEeccCccCCCCcccccCCChHHHHHHHHHH
Q 025500 39 SEEDGISMIKHAFSKGITFFDTADVYGQNANEVLLGKALKQ-LPREKIQVATKFGIAGIGVAGVIVKGAPDYVRSCCEAS 117 (252)
Q Consensus 39 ~~~~~~~~l~~A~~~Gin~~Dta~~Yg~g~se~~ig~~l~~-~~R~~~~i~tK~~~~~~~~~~~~~~~~~~~i~~~~~~s 117 (252)
+.++..+.++.+++.|++.|=.-- |....-+.+ +++++ .+ ++.+..=.- ..++.+... .
T Consensus 16 ~~e~~~~~~~~~~~~Gf~~~Kikv--g~~~D~~~v-~~ir~~~~--~~~l~vDaN----------~~~~~~~a~-~---- 75 (244)
T d1wufa1 16 NVETLLQLVNQYVDQGYERVKLKI--APNKDIQFV-EAVRKSFP--KLSLMADAN----------SAYNREDFL-L---- 75 (244)
T ss_dssp CHHHHHHHHHHHHHHTCCEEEEEC--BTTBSHHHH-HHHHTTCT--TSEEEEECT----------TCCCGGGHH-H----
T ss_pred CHHHHHHHHHHHHHCCCCEEEEEe--CCcHHHHHH-HHHHHhcc--chhhhhhhh----------ccccchhhh-h----
Confidence 688999999999999999865431 333334444 45665 44 343332111 123443332 1
Q ss_pred HHHcCCCcccEEEccCCCCCCCHHHHHHHHHHHHHcCCcc-EEEccCCCHHHHHHHhhcCCceEEeeecCccccch-hhh
Q 025500 118 LKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIK-YIGLSEASPGTIRRAHAVHPITAVQMEWSLWTRDI-EEE 195 (252)
Q Consensus 118 L~~Lg~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~G~ir-~iGvs~~~~~~l~~~~~~~~~~~~q~~~~~~~~~~-~~~ 195 (252)
+++| +..++.++..|-...+ ++.+.+++++-.+. ..|=+-++...+.++++...++++|+..+..-.-. ...
T Consensus 76 ~~~l--~~~~~~wiEeP~~~~d----~~~~~~l~~~~~~pia~dE~~~~~~~~~~~i~~~a~d~v~~d~~~~GGit~~~k 149 (244)
T d1wufa1 76 LKEL--DQYDLEMIEQPFGTKD----FVDHAWLQKQLKTRICLDENIRSVKDVEQAHSIGSCRAINLKLARVGGMSSALK 149 (244)
T ss_dssp HHTT--GGGTCSEEECCSCSSC----SHHHHHHHTTCSSEEEECTTCCSHHHHHHHHHHTCCSEEEECTGGGTSHHHHHH
T ss_pred hhcc--cccchhhhcCcccccc----hhhhhccccccccccccCccccchhhhhhhccccccceeecccccccchhhHHH
Confidence 2333 3456777888754433 56677888876654 34666688999999999888999999887654321 277
Q ss_pred HHHHHHHhCCeEEecccCccc
Q 025500 196 IIPLCRELGIGIVPYSPLGRG 216 (252)
Q Consensus 196 l~~~~~~~gi~v~a~spl~~G 216 (252)
+.+.|+++|+.+...+....|
T Consensus 150 i~~~a~~~gi~v~~h~~~~~~ 170 (244)
T d1wufa1 150 IAEYCALNEILVWCGGMLEAG 170 (244)
T ss_dssp HHHHHHHTTCEEEECCCCCCH
T ss_pred HHHHHHHcCCEEecCCCCCcc
Confidence 889999999999988765544
|
| >d1yeya1 c.1.11.2 (A:184-435) RTS beta protein {Xanthomonas campestris pv. campestris [TaxId: 340]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: Enolase C-terminal domain-like family: D-glucarate dehydratase-like domain: RTS beta protein species: Xanthomonas campestris pv. campestris [TaxId: 340]
Probab=90.19 E-value=2.4 Score=32.54 Aligned_cols=152 Identities=10% Similarity=0.058 Sum_probs=92.2
Q ss_pred CHHHHHHHHHHHHHCCCCEEeCcCCcCCCcHHHHHHHHHhcCCCCCEEEEeccCccCCCCcccccCCChHHHHHHHHHHH
Q 025500 39 SEEDGISMIKHAFSKGITFFDTADVYGQNANEVLLGKALKQLPREKIQVATKFGIAGIGVAGVIVKGAPDYVRSCCEASL 118 (252)
Q Consensus 39 ~~~~~~~~l~~A~~~Gin~~Dta~~Yg~g~se~~ig~~l~~~~R~~~~i~tK~~~~~~~~~~~~~~~~~~~i~~~~~~sL 118 (252)
++++..+..+.+++.|++.|=.--.-......+.+ +++++.--+++.|..-... .++.+... +.+
T Consensus 15 s~ee~~~~a~~~~~~Gf~~~KikvG~~~~~di~~v-~~vr~~~g~~~~l~vDaN~----------~~~~~~A~----~~~ 79 (252)
T d1yeya1 15 SDEKLVRLAKEAVADGFRTIKLKVGANVQDDIRRC-RLARAAIGPDIAMAVDANQ----------RWDVGPAI----DWM 79 (252)
T ss_dssp -CHHHHHHHHHHHHTTCSEEEEECCSCHHHHHHHH-HHHHHHHCSSSEEEEECTT----------CCCHHHHH----HHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEEECCCCHHHHHHHH-HHHHHHhCCCceEeecccc----------CcchHHHH----HHH
Confidence 46888899999999999987642111100112222 3444321233344333322 23444332 233
Q ss_pred HHcCCCcccEEEccCCCCCCCHHHHHHHHHHHHHc--CCccEEEccCCCHHHHHHHhhcCCceEEeeecCccccc-hhhh
Q 025500 119 KRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEE--GKIKYIGLSEASPGTIRRAHAVHPITAVQMEWSLWTRD-IEEE 195 (252)
Q Consensus 119 ~~Lg~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~--G~ir~iGvs~~~~~~l~~~~~~~~~~~~q~~~~~~~~~-~~~~ 195 (252)
+.| +-++++++..|-...+ +..+.+++++ +.--+.|=+.++...+.++++...++++|+..+..-.- ....
T Consensus 80 ~~l--~~~~~~~iEeP~~~~d----~~~~~~~~~~~~~ipia~gE~~~~~~~~~~~i~~~a~d~~~~d~~~~GGit~~~k 153 (252)
T d1yeya1 80 RQL--AEFDIAWIEEPTSPDD----VLGHAAIRQGITPVPVSTGEHTQNRVVFKQLLQAGAVDLIQIDAARVGGVNENLA 153 (252)
T ss_dssp HTT--GGGCCSCEECCSCTTC----HHHHHHHHHHSTTSCEECCTTCCSHHHHHHHHHHTCCSEECCCTTTSSHHHHHHH
T ss_pred Hhh--hhcCceeecCCcchhh----HHHHHHHhhccCCCceeccccccchhhhhhHhhccccceeccccccccCchhhhH
Confidence 334 3457777777755444 4444454443 34555677889999999999989999999988765421 1277
Q ss_pred HHHHHHHhCCeEEecc
Q 025500 196 IIPLCRELGIGIVPYS 211 (252)
Q Consensus 196 l~~~~~~~gi~v~a~s 211 (252)
+...|+++|+.+...+
T Consensus 154 ia~~A~~~~i~v~~h~ 169 (252)
T d1yeya1 154 ILLLAAKFGVRVFPHA 169 (252)
T ss_dssp HHHHHHHHTCEECCCC
T ss_pred HHHHHHHcCCEEecCC
Confidence 9999999999987654
|
| >d1jdfa1 c.1.11.2 (A:138-446) D-glucarate dehydratase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: Enolase C-terminal domain-like family: D-glucarate dehydratase-like domain: D-glucarate dehydratase species: Escherichia coli [TaxId: 562]
Probab=89.66 E-value=0.77 Score=36.94 Aligned_cols=159 Identities=13% Similarity=0.091 Sum_probs=95.9
Q ss_pred CHHHHHHHHHHHHHC-CCCEEeCcCCcCCCcHHHHHHHHHhc-CCCCCEEEEeccCccCCCCcccccCCChHHHHHHHHH
Q 025500 39 SEEDGISMIKHAFSK-GITFFDTADVYGQNANEVLLGKALKQ-LPREKIQVATKFGIAGIGVAGVIVKGAPDYVRSCCEA 116 (252)
Q Consensus 39 ~~~~~~~~l~~A~~~-Gin~~Dta~~Yg~g~se~~ig~~l~~-~~R~~~~i~tK~~~~~~~~~~~~~~~~~~~i~~~~~~ 116 (252)
++++..+..+++++. |++.|=.--.-.....+...=+++++ ++..++.|=.-- .++.+. ++ +
T Consensus 47 ~p~~~~~~a~~~~~~~Gf~~~KiKvG~~~~~~di~~v~avr~~~pd~~l~vDaN~------------~~s~~~---Ai-~ 110 (309)
T d1jdfa1 47 TPDAVVRLAEAAYEKYGFNDFKLKGGVLAGEEEAESIVALAQRFPQARITLDPNG------------AWSLNE---AI-K 110 (309)
T ss_dssp SHHHHHHHHHHHHHHHCCSCEEEECSSSCHHHHHHHHHHHHHHCTTSCEEEECTT------------BBCHHH---HH-H
T ss_pred CHHHHHHHHHHHHHhcCCCeEEEECCCCCHHHHHHHHHHHHHHCCCCeEEeeccC------------CCCHHH---HH-H
Confidence 677777888888887 99976432110011122222334444 555555541111 134433 33 3
Q ss_pred HHHHcCCCcccEEEccCCCCCCCHHHHHHHHHHHHHcCCc-cEEEccCCCHHHHHHHhhcCCceEEeeecCccccchhhh
Q 025500 117 SLKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKI-KYIGLSEASPGTIRRAHAVHPITAVQMEWSLWTRDIEEE 195 (252)
Q Consensus 117 sL~~Lg~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~G~i-r~iGvs~~~~~~l~~~~~~~~~~~~q~~~~~~~~~~~~~ 195 (252)
..+.|. + ++.++..|-...+.....+.|.+++++-.+ -+.|=+-++...+.++++...++++|......--.....
T Consensus 111 ~~~~le--~-~l~w~EEPv~~~d~~~~~~~l~~lr~~~~ipIa~gE~~~~~~~~~~~i~~~a~di~~~d~~~GGit~~~k 187 (309)
T d1jdfa1 111 IGKYLK--G-SLAYAEDPCGAEQGFSGREVMAEFRRATGLPTATNMIATDWRQMGHTLSLQSVDIPLADPHFWTMQGSVR 187 (309)
T ss_dssp HHHHTT--T-TCSCEESCBCCBTTBCHHHHHHHHHHHHCCCEEESSSSSSHHHHHHHHHHTCCSEEBCCHHHHCHHHHHH
T ss_pred HHHHHh--h-cchhhhhhcccCcchhhHHHHHHhhcccccceecCcccchhhhhhhhhhhccceeeecccccccchHHHH
Confidence 445553 3 567777774433333346677888877554 467777899999999998888899998743211111277
Q ss_pred HHHHHHHhCCeEEecccCccc
Q 025500 196 IIPLCRELGIGIVPYSPLGRG 216 (252)
Q Consensus 196 l~~~~~~~gi~v~a~spl~~G 216 (252)
+.+.|+++|+.+...+....+
T Consensus 188 ia~lA~~~gi~v~~H~~~~~~ 208 (309)
T d1jdfa1 188 VAQMCHEFGLTWGSHSDNHFD 208 (309)
T ss_dssp HHHHHHHHTCCCBCCCCSCCH
T ss_pred HHHHHHhcCCCccccCCCCcH
Confidence 899999999999887655433
|
| >d2gdqa1 c.1.11.2 (A:119-374) Hypothetical protein YitF {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: Enolase C-terminal domain-like family: D-glucarate dehydratase-like domain: Hypothetical protein YitF species: Bacillus subtilis [TaxId: 1423]
Probab=87.12 E-value=5.1 Score=30.63 Aligned_cols=151 Identities=9% Similarity=0.010 Sum_probs=94.4
Q ss_pred CHHHHHHHHHHHHHCCCCEEeCcCCcCCCc--HHHHHHHHHhcCCCCCEEEEeccCccCCCCcccccCCChHHHHHHHHH
Q 025500 39 SEEDGISMIKHAFSKGITFFDTADVYGQNA--NEVLLGKALKQLPREKIQVATKFGIAGIGVAGVIVKGAPDYVRSCCEA 116 (252)
Q Consensus 39 ~~~~~~~~l~~A~~~Gin~~Dta~~Yg~g~--se~~ig~~l~~~~R~~~~i~tK~~~~~~~~~~~~~~~~~~~i~~~~~~ 116 (252)
+.++..+.++.+++.|++.|=.--. +... ..+.+ +++++.--+++.|..-... .++.+... +
T Consensus 21 ~~~~~~~~~~~~~~~Gf~~~Kikvg-~~~~~~di~~v-~avr~~~G~~~~l~vDan~----------~~~~~~A~----~ 84 (256)
T d2gdqa1 21 WISRSVSNVEAQLKKGFEQIKVKIG-GTSFKEDVRHI-NALQHTAGSSITMILDANQ----------SYDAAAAF----K 84 (256)
T ss_dssp HHHHHHHHHHHHHTTTCCEEEEECS-SSCHHHHHHHH-HHHHHHHCTTSEEEEECTT----------CCCHHHHH----T
T ss_pred HHHHHHHHHHHHHHCCCCEEEEECC-CCCHHHHHHHH-HHHHHHcCCCeEEeecccc----------CCCHHHHH----H
Confidence 3477788889999999998764311 1111 12222 4445422233444333321 13333222 2
Q ss_pred HHHHcCCCcccEEEccCCCCCCCHHHHHHHHHHHHHcCCccE-EEccCCCHHHHHHHhhcCCceEEeeecCccccch-hh
Q 025500 117 SLKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKY-IGLSEASPGTIRRAHAVHPITAVQMEWSLWTRDI-EE 194 (252)
Q Consensus 117 sL~~Lg~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~G~ir~-iGvs~~~~~~l~~~~~~~~~~~~q~~~~~~~~~~-~~ 194 (252)
.++.|. ++..+.++..|-...+ ++.+.+++++-.+.- .|=+-++...+.++++...++++|+..+..-.-. ..
T Consensus 85 ~~~~l~-~~~~i~~~EeP~~~~d----~~~~~~l~~~~~ipIa~gE~~~~~~~~~~~i~~~a~di~~~d~~~~GGit~~~ 159 (256)
T d2gdqa1 85 WERYFS-EWTNIGWLEEPLPFDQ----PQDYAMLRSRLSVPVAGGENMKGPAQYVPLLSQRCLDIIQPDVMHVNGIDEFR 159 (256)
T ss_dssp THHHHT-TCSCEEEEECCSCSSC----HHHHHHHHTTCSSCEEECTTCCSHHHHHHHHHTTCCSEECCCTTTTTHHHHHH
T ss_pred HHHHHh-hcCceeEeccccccch----HHHHHHHhhcccceeecCccccchhhHHHHHHhhcceeeeccccccccHHHHH
Confidence 344443 2456788888855433 677888888777663 3555688999999999899999999988764322 27
Q ss_pred hHHHHHHHhCCeEEec
Q 025500 195 EIIPLCRELGIGIVPY 210 (252)
Q Consensus 195 ~l~~~~~~~gi~v~a~ 210 (252)
.+.+.|+++|+.|...
T Consensus 160 ~i~~~a~~~~i~v~~h 175 (256)
T d2gdqa1 160 DCLQLARYFGVRASAH 175 (256)
T ss_dssp HHHHHHHHHTCEECCC
T ss_pred HHHHHHhhhccccccc
Confidence 8999999999998664
|
| >d1muca1 c.1.11.2 (A:131-372) Muconate-lactonizing enzyme {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: Enolase C-terminal domain-like family: D-glucarate dehydratase-like domain: Muconate-lactonizing enzyme species: Pseudomonas putida [TaxId: 303]
Probab=83.83 E-value=7.1 Score=29.41 Aligned_cols=156 Identities=12% Similarity=-0.030 Sum_probs=92.3
Q ss_pred CHHHHHHHHHHHHHCCCCEEeCcCCcCCCcHHHHHH--HHHhcCCCCCEEEEeccCccCCCCcccccCCChHHHHHHHHH
Q 025500 39 SEEDGISMIKHAFSKGITFFDTADVYGQNANEVLLG--KALKQLPREKIQVATKFGIAGIGVAGVIVKGAPDYVRSCCEA 116 (252)
Q Consensus 39 ~~~~~~~~l~~A~~~Gin~~Dta~~Yg~g~se~~ig--~~l~~~~R~~~~i~tK~~~~~~~~~~~~~~~~~~~i~~~~~~ 116 (252)
++++..++++..-+.|++.|=.-- |.+.-++-+- +++++.-.+++.|..-.-. .++.+... .+-+
T Consensus 17 ~~~~~~~~~~~~~~~G~~~~KiKv--G~~~~~~Di~~i~~ir~~~g~~~~l~vDaN~----------~~~~~~A~-~~~~ 83 (242)
T d1muca1 17 TARDIAEARHMLEIRRHRVFKLKI--GANPVEQDLKHVVTIKRELGDSASVRVDVNQ----------YWDESQAI-RACQ 83 (242)
T ss_dssp HHHHHHHHHHHHHTTSCSEEEEEC--SSSCHHHHHHHHHHHHHHHGGGSEEEEECTT----------CBCHHHHH-HHHH
T ss_pred cHHHHHHHHHHHHHCCCCEEEEEE--CCCCHHHHHHHHHHHHHHhCCCCEEEEecCC----------CCcHHHHH-HHHH
Confidence 344555555555567999886421 1111222221 2333311233444333221 23455443 3345
Q ss_pred HHHHcCCCcccEEEccCCCCCCCHHHHHHHHHHHHHcCCcc-EEEccCCCHHHHHHHhhcCCceEEeeecCccccch-hh
Q 025500 117 SLKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIK-YIGLSEASPGTIRRAHAVHPITAVQMEWSLWTRDI-EE 194 (252)
Q Consensus 117 sL~~Lg~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~G~ir-~iGvs~~~~~~l~~~~~~~~~~~~q~~~~~~~~~~-~~ 194 (252)
.|+.+++ .++..|-... -++.+.+|+++-.+. ..|=+-++...+.++++....+++|+..+..-.-. -.
T Consensus 84 ~l~~~~i-----~~iEeP~~~~----d~~~~~~L~~~~~~pIa~~E~~~~~~~~~~~i~~~~~d~~~~d~~~~GGit~~~ 154 (242)
T d1muca1 84 VLGDNGI-----DLIEQPISRI----NRGGQVRLNQRTPAPIMADESIESVEDAFSLAADGAASIFALKIAKNGGPRAVL 154 (242)
T ss_dssp HHHHTTC-----CCEECCBCTT----CHHHHHHHHHHCSSCEEESTTCSSHHHHHHHHHHTCCSEEEECHHHHTSHHHHH
T ss_pred HhhhhhH-----HHhhcchhhh----hhhhhhhhhhhhhheeecccccccccchhhhhhcccccccccccccchhHHHHH
Confidence 5666654 4556664332 266778888775554 44666688999999998888999999876543211 27
Q ss_pred hHHHHHHHhCCeEEecccCccc
Q 025500 195 EIIPLCRELGIGIVPYSPLGRG 216 (252)
Q Consensus 195 ~l~~~~~~~gi~v~a~spl~~G 216 (252)
.+.+.|+++|+.++..+.+.++
T Consensus 155 ~i~~~A~~~gi~~~~~~~~~~~ 176 (242)
T d1muca1 155 RTAQIAEAAGIGLYGGTMLEGS 176 (242)
T ss_dssp HHHHHHHHHTCEEEECCSSCCH
T ss_pred HHHHHHHhCCCCcccccccccc
Confidence 8999999999999988877654
|
| >d1gqna_ c.1.10.1 (A:) Type I 3-dehydroquinate dehydratase {Salmonella typhi [TaxId: 90370]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: Aldolase family: Class I aldolase domain: Type I 3-dehydroquinate dehydratase species: Salmonella typhi [TaxId: 90370]
Probab=81.75 E-value=6.8 Score=30.05 Aligned_cols=119 Identities=11% Similarity=0.084 Sum_probs=72.4
Q ss_pred CHHHHHHHHHHHHHCC-CCEEeCcCCcCCCcHHHHHHHHHhc--CCCCCEEEEeccCccCCCCcccccCCChHHHHHHHH
Q 025500 39 SEEDGISMIKHAFSKG-ITFFDTADVYGQNANEVLLGKALKQ--LPREKIQVATKFGIAGIGVAGVIVKGAPDYVRSCCE 115 (252)
Q Consensus 39 ~~~~~~~~l~~A~~~G-in~~Dta~~Yg~g~se~~ig~~l~~--~~R~~~~i~tK~~~~~~~~~~~~~~~~~~~i~~~~~ 115 (252)
++++-.++++.+++.| +.++|.-..+. +..+.+.++. ...-.+++|..-+... .+.+.+.+.++
T Consensus 93 ~~~~~~~ll~~~~~~~~~d~iDiEl~~~----~~~~~~li~~a~~~~~~vI~S~Hdf~~T---------P~~~~l~~~~~ 159 (252)
T d1gqna_ 93 TTQHYLTLNRAAIDSGLVDMIDLELFTG----DADVKATVDYAHAHNVYVVMSNHDFHQT---------PSAEEMVSRLR 159 (252)
T ss_dssp CHHHHHHHHHHHHHHSCCSEEEEEGGGC----HHHHHHHHHHHHHTTCEEEEEEEESSCC---------CCHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCCceEecccccc----HHHHHHHHHHhhcCCCeEEEEecCCCCC---------CCHHHHHHHHH
Confidence 6788899999999999 78999765553 3444444432 2456677777644322 34667776666
Q ss_pred HHHHHcCCCcccEEEccCCCCCCCHHHHHHHHHHHHHcC-CccEEEccCCCHHHHHHHh
Q 025500 116 ASLKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEG-KIKYIGLSEASPGTIRRAH 173 (252)
Q Consensus 116 ~sL~~Lg~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~G-~ir~iGvs~~~~~~l~~~~ 173 (252)
+. +++|.|.+-+...- ....+....+++..++++.+ ++--|+++.-....+.++.
T Consensus 160 ~m-~~~gaDivKia~~a--~~~~D~~~ll~~~~~~~~~~~~~P~I~~~MG~~G~~SRi~ 215 (252)
T d1gqna_ 160 KM-QALGADIPKIAVMP--QSKHDVLTLLTATLEMQQHYADRPVITMSMAKEGVISRLA 215 (252)
T ss_dssp HH-HHTTCSEEEEEECC--SSHHHHHHHHHHHHHHHHHTCSSCCEEEECTTTTHHHHHC
T ss_pred HH-HHhCCCeEEEEecC--CCHHHHHHHHHHHHHHHHhCCCCCEEEEecCCcchhHHHH
Confidence 55 45887766666552 22234445666667776654 4555555554444455543
|