Citrus Sinensis ID: 025509

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-
Protein Sequence
MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRHNSLFRSMNTILHALPGIAGKCLLKNVQQVILNFQKQRNKI
Secondary Structure (PSIPRED)
cEEEEEcccccHHHHHHHHHHHcccEEEEEcccHHHHHHHHHHHHHHccccEEEEEEcccccHHHHHHHHHHHHHccccccEEEEccccccccccccccHHHHHHHHHccHHHHHHHHHHHHHHHHHccccccccEEEEccHHHHccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHccccccEEEEEEccccccccccccccHHHHHHHHHHHHHHHHHHHHHccccccccccccccccc
Secondary Structure Prediction (SSPRO)
cEEEEEcccccccHHHHHHHHHcccEEEEEEccHHHHHHHHHHHHHHcccccEEEEEEccccHHHHHHHHHHHHHccccccEEEEccccccccccccccccEEHHHHHHHHHHHHHHHHHHHHHHHHHHcccccEEEEEEcHHHHccccccccHcccccccccccHHHHHHHHHHHHHHHHHHHHHHHHccccEEEEccccccEcccHHHcccHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHccccccc
Coil and Loop (DISEMBL)
MDIVITgatsgigtETARVLALRGVHVVMGvrdiaagkdVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQLNILInnagimgtpfmlskdnIELQFATNHLGHFLLTNLLLDTMKKTArksggegriinvsseghrlayhegirfdkindpsgyngfrAYSQSKLANILHANELARRLkedgvditansvhpgaiatniirhnsLFRSMNTILhalpgiagkcLLKNVQQVILNFQKQRNKI
Flexible Loop (DISEMBL)
mdivitgatsgigtetARVLALRGVHVVMgvrdiaagkdvketIVKEipsakvdaMELDLSSLASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTarksggegriinvsseghRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDItansvhpgaiaTNIIRHNSLFRSMNTILHALPGIAGKCLLKNVQQVILNFQKQRNKI
Low Complexity Region (SEG)
MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQFAtnhlghflltnlllDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRHNSLFRSMNTILHALPGIAGKCLLKNVQQVILNFQKQRNKI
Disordered region (IsUnstruct)
**IVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKT*******GRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRHNSLFRSMNTILHALPGIAGKCLLKNVQQVILNF*******
Disordered Region (DISOPRED)
MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRHNSLFRSMNTILHALPGIAGKCLLKNVQQVILNFQ******
Disordered Region (DISEMBL)
MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRHNSLFRSMNTILHALPGIAGKCLLKNVQQVILNFQKQRNKI
Disordered Region (DISPRO)
MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRHNSLFRSMNTILHALPGIAGKCLLKNVQQVILNFQKQ****
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRHNSLFRSMNTILHALPGIAGKCLLKNVQQVILNFQKQRNKI
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	251	2.2.26 [Sep-21-2011]
Q6RVV4	316	Short-chain dehydrogenase	N/A	no	0.912	0.724	0.703	5e-93
A2RVM0	322	Short-chain dehydrogenase	no	no	0.916	0.714	0.661	2e-86
Q5F389	414	WW domain-containing oxid	yes	no	0.856	0.519	0.408	9e-41
Q91WL8	414	WW domain-containing oxid	yes	no	0.784	0.475	0.408	7e-39
Q9NZC7	414	WW domain-containing oxid	yes	no	0.856	0.519	0.396	7e-38
Q8TC12	318	Retinol dehydrogenase 11	no	no	0.832	0.657	0.438	9e-38
Q5R9W5	414	WW domain-containing oxid	no	no	0.856	0.519	0.388	4e-37
P59837	316	Retinol dehydrogenase 12	no	no	0.804	0.639	0.433	4e-36
Q9HBH5	336	Retinol dehydrogenase 14	no	no	0.792	0.592	0.436	3e-35
Q8BYK4	316	Retinol dehydrogenase 12	no	no	0.804	0.639	0.419	1e-34

>sp|Q6RVV4|TIC32_PEA Short-chain dehydrogenase TIC 32, chloroplastic OS=Pisum sativum GN=TIC32 PE=1 SV=1

 Score =  340 bits (872), Expect = 5e-93,   Method: Compositional matrix adjust.
 Identities = 166/236 (70%), Positives = 193/236 (81%), Gaps = 7/236 (2%)

Query: 4   VITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSL 63
           ++TGA+SGIG ET RVLALRG HV+MGVR++ A KDVK+TI+K+IPSAKVDA+ELDLSSL
Sbjct: 34  IVTGASSGIGAETTRVLALRGAHVIMGVRNMVAAKDVKDTILKDIPSAKVDAIELDLSSL 93

Query: 64  ASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTM 123
            SV+ FASE+N     LNILINNAGIM  PF LSKDNIELQFATNH+GHFLLTNLLLDTM
Sbjct: 94  DSVKKFASEFNSSGRPLNILINNAGIMACPFKLSKDNIELQFATNHIGHFLLTNLLLDTM 153

Query: 124 KKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANILHANEL 183
           KKT R+S  EGRI+NV+SE HR AY EGIRFDKIND S YN +RAY QSKLAN+LHAN+L
Sbjct: 154 KKTTRESKKEGRIVNVASEAHRFAYPEGIRFDKINDQSSYNNWRAYGQSKLANVLHANQL 213

Query: 184 ARRLKEDGVDITANSVHPGAIATNIIRHNSLFRSMNTILHALPGIAGKCLLKNVQQ 239
            + LKEDGV+ITANS+HPG I TN+ RHNS        ++ L  + GK +LKNVQQ
Sbjct: 214 TKHLKEDGVNITANSLHPGTIVTNLFRHNS-------AVNGLINVIGKLVLKNVQQ 262

Involved in protein precursor import into chloroplasts. Part of the redox regulon consisting of TIC32, TIC 55 and TIC62. Has a NADPH-dependent dehydrogenase activity, but only after preincubation with lipids.
Pisum sativum (taxid: 3888)
EC: 1EC: .EC: 1EC: .EC: 1EC: .EC: -

>sp|A2RVM0|TIC32_ARATH Short-chain dehydrogenase TIC 32, chloroplastic OS=Arabidopsis thaliana GN=TIC32 PE=2 SV=1

 Score =  318 bits (815), Expect = 2e-86,   Method: Compositional matrix adjust.
 Identities = 156/236 (66%), Positives = 183/236 (77%), Gaps = 6/236 (2%)

Query: 4   VITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSL 63
           ++TGA+SGIG ETARVL+LRGVHVVM VR+  +G  VKE IVK++P AK+D MELDLSS+
Sbjct: 33  IVTGASSGIGVETARVLSLRGVHVVMAVRNTDSGAKVKEDIVKQVPGAKLDVMELDLSSM 92

Query: 64  ASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTM 123
            SVR FASEY      LN+LINNAGIM  PFMLSKDNIELQFATNHLGHFLLT LLLDTM
Sbjct: 93  QSVRKFASEYKSTGLPLNLLINNAGIMACPFMLSKDNIELQFATNHLGHFLLTKLLLDTM 152

Query: 124 KKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANILHANEL 183
           K T+R+S  EGRI+N+SSE HR +Y EG+RFDKIND S Y+  RAY QSKL N+LHANEL
Sbjct: 153 KSTSRESKREGRIVNLSSEAHRFSYPEGVRFDKINDKSSYSSMRAYGQSKLCNVLHANEL 212

Query: 184 ARRLKEDGVDITANSVHPGAIATNIIRHNSLFRSMNTILHALPGIAGKCLLKNVQQ 239
            ++LKEDGV+ITANS+HPGAI TN+ R+       N  L    G   K +LK+V Q
Sbjct: 213 TKQLKEDGVNITANSLHPGAIMTNLGRY------FNPYLAVAVGAVAKYILKSVPQ 262

Involved in protein precursor import into chloroplasts. Part of the redox regulon consisting of TIC32, TIC 55 and TIC62.

Arabidopsis thaliana (taxid: 3702)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: -

>sp|Q5F389|WWOX_CHICK WW domain-containing oxidoreductase OS=Gallus gallus GN=WWOX PE=2 SV=2

 Score =  167 bits (422), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 102/250 (40%), Positives = 147/250 (58%), Gaps = 35/250 (14%)

Query: 3   IVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSS 62
           I+ITGA SGIG ETA+  AL G +V++  R+++ G D  + I++E   AKV+AM LDL+S
Sbjct: 127 IIITGANSGIGFETAKSFALHGAYVILACRNMSRGNDAVQRILEEWHKAKVEAMTLDLAS 186

Query: 63  LASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDT 122
           L SV+NFA  +  ++  L+IL+ NA I G+ + L++D +E  F  NHLGHF L  LL D 
Sbjct: 187 LRSVQNFAEAFKSKNMPLHILVCNAAIFGSSWCLTEDGLESTFQVNHLGHFYLVQLLEDI 246

Query: 123 MKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSG-------------YNGFRAY 169
           +++++       R++ VSSE H        RF +I D SG             Y    AY
Sbjct: 247 LRRSS-----PARVVVVSSESH--------RFTEIKDSSGKLDFSLLSPSKKEYWAMLAY 293

Query: 170 SQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRHNSLFRSMNTILHALPGIA 229
           ++SKL NIL +NEL RRL   GV  T+NSVHPG    N+I ++S+ R  N  ++ L    
Sbjct: 294 NRSKLCNILFSNELNRRLSPHGV--TSNSVHPG----NMI-YSSIHR--NWWVYTLLFTL 344

Query: 230 GKCLLKNVQQ 239
            +   K++QQ
Sbjct: 345 ARPFTKSMQQ 354

Putative oxidoreductase. Acts as a tumor suppressor and plays a role in apoptosis. May function synergistically with p53/TP53 to control genotoxic stress-induced cell death. Plays a role in TGFB1 signaling and TGFB1-mediated cell death. May also play a role in tumor necrosis factor (TNF)-mediated cell death. Required for normal bone development. Inhibits Wnt signaling.

Gallus gallus (taxid: 9031)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: -

>sp|Q91WL8|WWOX_MOUSE WW domain-containing oxidoreductase OS=Mus musculus GN=Wwox PE=1 SV=1

 Score =  160 bits (405), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 92/225 (40%), Positives = 129/225 (57%), Gaps = 28/225 (12%)

Query: 3   IVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSS 62
           +++TGA SGIG ETA+  AL G HV++  R+++   +    I++E   AKV+AM LDL+ 
Sbjct: 127 VLVTGANSGIGFETAKSFALHGAHVILACRNLSRASEAVSRILEEWHKAKVEAMTLDLAV 186

Query: 63  LASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDT 122
           L SV++FA  +  ++  L++L+ NAG    P+ L+KD +E  F  NHLGHF L  LL D 
Sbjct: 187 LRSVQHFAEAFKAKNVSLHVLVCNAGTFALPWGLTKDGLETTFQVNHLGHFYLVQLLQDV 246

Query: 123 MKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSG-------------YNGFRAY 169
           + +++       R+I VSSE H        RF  IND SG             Y    AY
Sbjct: 247 LCRSS-----PARVIVVSSESH--------RFTDINDSSGKLDLSRLSPPRSDYWAMLAY 293

Query: 170 SQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRHNSL 214
           ++SKL NIL +NEL RRL   GV  T+N+VHPG +  + I  NS 
Sbjct: 294 NRSKLCNILFSNELHRRLSPRGV--TSNAVHPGNMMYSAIHRNSW 336

Putative oxidoreductase. Acts as a tumor suppressor and plays a role in apoptosis. May function synergistically with p53/TP53 to control genotoxic stress-induced cell death. Plays a role in TGFB1 signaling and TGFB1-mediated cell death. Inhibits Wnt signaling, probably by sequestering DVL2 in the cytoplasm (By similarity). May also play a role in tumor necrosis factor (TNF)-mediated cell death. Required for normal bone development.

Mus musculus (taxid: 10090)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: -

>sp|Q9NZC7|WWOX_HUMAN WW domain-containing oxidoreductase OS=Homo sapiens GN=WWOX PE=1 SV=1

 Score =  157 bits (397), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 99/250 (39%), Positives = 139/250 (55%), Gaps = 35/250 (14%)

Query: 3   IVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSS 62
           +V+TGA SGIG ETA+  AL G HV++  R++A   +    I++E   AKV+AM LDL+ 
Sbjct: 127 VVVTGANSGIGFETAKSFALHGAHVILACRNMARASEAVSRILEEWHKAKVEAMTLDLAL 186

Query: 63  LASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDT 122
           L SV++FA  +  ++  L++L+ NA     P+ L+KD +E  F  NHLGHF L  LL D 
Sbjct: 187 LRSVQHFAEAFKAKNVPLHVLVCNAATFALPWSLTKDGLETTFQVNHLGHFYLVQLLQDV 246

Query: 123 MKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSG-------------YNGFRAY 169
           + ++A       R+I VSSE H        RF  IND  G             Y    AY
Sbjct: 247 LCRSA-----PARVIVVSSESH--------RFTDINDSLGKLDFSRLSPTKNDYWAMLAY 293

Query: 170 SQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRHNSLFRSMNTILHALPGIA 229
           ++SKL NIL +NEL RRL   GV  T+N+VHPG +  + I H S +  + T+L  L    
Sbjct: 294 NRSKLCNILFSNELHRRLSPRGV--TSNAVHPGNMMYSNI-HRSWW--VYTLLFTL---- 344

Query: 230 GKCLLKNVQQ 239
            +   K++QQ
Sbjct: 345 ARPFTKSMQQ 354

Putative oxidoreductase. Acts as a tumor suppressor and plays a role in apoptosis. Required for normal bone development (By similarity). May function synergistically with p53/TP53 to control genotoxic stress-induced cell death. Plays a role in TGFB1 signaling and TGFB1-mediated cell death. May also play a role in tumor necrosis factor (TNF)-mediated cell death. Inhibits Wnt signaling, probably by sequestering DVL2 in the cytoplasm.

Homo sapiens (taxid: 9606)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: -

>sp|Q8TC12|RDH11_HUMAN Retinol dehydrogenase 11 OS=Homo sapiens GN=RDH11 PE=1 SV=2

 Score =  157 bits (396), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 97/221 (43%), Positives = 131/221 (59%), Gaps = 12/221 (5%)

Query: 3   IVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSS 62
           +V+TGA +GIG ETA+ LA RG  V +  RD+  G+ V + I     + +V   +LDLS 
Sbjct: 44  VVVTGANTGIGKETAKELAQRGARVYLACRDVEKGELVAKEIQTTTGNQQVLVRKLDLSD 103

Query: 63  LASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDT 122
             S+R FA  +  +   L++LINNAG+M  P+  + D  E+    NHLGHFLLT+LLL+ 
Sbjct: 104 TKSIRAFAKGFLAEEKHLHVLINNAGVMMCPYSKTADGFEMHIGVNHLGHFLLTHLLLEK 163

Query: 123 MKKTARKSGGEGRIINVSSEGHRLAYHEG-IRFDKINDPSGYNGFRAYSQSKLANILHAN 181
           +K++A       RI+NVSS    LA+H G I F  +     YN   AY  SKLANIL   
Sbjct: 164 LKESA-----PSRIVNVSS----LAHHLGRIHFHNLQGEKFYNAGLAYCHSKLANILFTQ 214

Query: 182 ELARRLKEDGVDITANSVHPGAIATNIIRHNSLFRSMNTIL 222
           ELARRLK  GV  T  SVHPG + + ++RH+S  R M  + 
Sbjct: 215 ELARRLKGSGV--TTYSVHPGTVQSELVRHSSFMRWMWWLF 253

Exhibits an oxidoreductive catalytic activity towards retinoids. Most efficient as an NADPH-dependent retinal reductase. Displays high activity towards 9-cis and all-trans-retinol. Also involved in the metabolism of short-chain aldehydes. No steroid dehydrogenase activity detected.

Homo sapiens (taxid: 9606)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 3

EC: 0

EC: 0

>sp|Q5R9W5|WWOX_PONAB WW domain-containing oxidoreductase OS=Pongo abelii GN=WWOX PE=2 SV=1

 Score =  154 bits (390), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 97/250 (38%), Positives = 139/250 (55%), Gaps = 35/250 (14%)

Query: 3   IVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSS 62
           +V+TGA SGIG ETA+  AL G HV++  R++A   +    I++E   AKV+A+ LDL+ 
Sbjct: 127 VVVTGANSGIGFETAKSFALHGAHVILACRNMARASEAVSRILEEWHKAKVEAVTLDLAL 186

Query: 63  LASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDT 122
           L SV++FA  +  ++  L++L+ NA     P+ L+KD +E  F  NHLGHF L  LL D 
Sbjct: 187 LRSVQHFAEAFKAKNVPLHVLVCNAATFALPWSLTKDGLETTFQVNHLGHFYLVQLLQDV 246

Query: 123 MKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSG-------------YNGFRAY 169
           + ++A       R+I VSSE H        RF  IND  G             Y    AY
Sbjct: 247 LCRSA-----PARVIVVSSESH--------RFTDINDSLGKLDFSRLSPTKNDYWAMLAY 293

Query: 170 SQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRHNSLFRSMNTILHALPGIA 229
           ++SKL N+L +NEL RRL   GV  T+N+VHPG +  + I H S +  + T+L  L    
Sbjct: 294 NRSKLCNVLFSNELHRRLSPRGV--TSNAVHPGNMMYSNI-HRSWW--VYTLLFTL---- 344

Query: 230 GKCLLKNVQQ 239
            +   K++QQ
Sbjct: 345 ARPFTKSMQQ 354

Putative oxidoreductase. Acts as a tumor suppressor and plays a role in apoptosis. May function synergistically with p53/TP53 to control genotoxic stress-induced cell death. Plays a role in TGFB1 signaling and TGFB1-mediated cell death. May also play a role in tumor necrosis factor (TNF)-mediated cell death. Required for normal bone development. Inhibits Wnt signaling, probably by sequestering DVL2 in the cytoplasm.

Pongo abelii (taxid: 9601)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: -

>sp|P59837|RDH12_BOVIN Retinol dehydrogenase 12 OS=Bos taurus GN=RDH12 PE=2 SV=1

 Score =  151 bits (382), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 92/212 (43%), Positives = 126/212 (59%), Gaps = 10/212 (4%)

Query: 3   IVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSS 62
           +VITGA +GIG ETAR LA RG  V +  RD+  G+     I  +  +++V   +LDLS 
Sbjct: 42  VVITGANTGIGKETARELARRGARVYIACRDVLKGESAASEIQADTKNSQVLVRKLDLSD 101

Query: 63  LASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDT 122
             S+R FA  +  +  QL+ILINNAG+M  P+  + D  E   A NHLGHFLLT+LLL  
Sbjct: 102 TKSIRAFAEGFLAEEKQLHILINNAGVMLCPYSKTADGFETHLAVNHLGHFLLTHLLLGR 161

Query: 123 MKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANILHANE 182
           +K++A       R++N+SS  H L     IRF  +     YN   AY  SKLAN+L   E
Sbjct: 162 LKESA-----PARVVNLSSVAHHLG---KIRFHDLQGDKYYNLGFAYCHSKLANVLFTRE 213

Query: 183 LARRLKEDGVDITANSVHPGAIATNIIRHNSL 214
           LA+RLK  G  +T  +VHPG + + ++RH+ L
Sbjct: 214 LAKRLK--GTGVTTYAVHPGIVRSKLVRHSFL 243

Exhibits an oxidoreductive catalytic activity towards retinoids. Most efficient as an NADPH-dependent retinal reductase. Displays high activity toward 9-cis and all-trans-retinol. Also involved in the metabolism of short-chain aldehydes. No steroid dehydrogenase activity detected. Might be the key enzyme in the formation of 11-cis-retinal from 11-cis-retinol during regeneration of the cone visual pigments.

Bos taurus (taxid: 9913)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: -

>sp|Q9HBH5|RDH14_HUMAN Retinol dehydrogenase 14 OS=Homo sapiens GN=RDH14 PE=1 SV=1

 Score =  149 bits (375), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 97/222 (43%), Positives = 129/222 (58%), Gaps = 23/222 (10%)

Query: 3   IVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEI-------PSAKVDA 55
           ++ITGA SG+G  TA  L   G  V+MG RD A  ++    + +E+       P   V  
Sbjct: 46  VLITGANSGLGRATAAELLRLGARVIMGCRDRARAEEAAGQLRRELRQAAECGPEPGVSG 105

Query: 56  M------ELDLSSLASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQFATNH 109
           +      ELDL+SL SVR F  E   +  +L++LINNAGI   P+M ++D  E+QF  NH
Sbjct: 106 VGELIVRELDLASLRSVRAFCQEMLQEEPRLDVLINNAGIFQCPYMKTEDGFEMQFGVNH 165

Query: 110 LGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAY 169
           LGHFLLTNLLL  +K +A       RI+ VSS   +L  +  I FD +N    YN    Y
Sbjct: 166 LGHFLLTNLLLGLLKSSA-----PSRIVVVSS---KLYKYGDINFDDLNSEQSYNKSFCY 217

Query: 170 SQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH 211
           S+SKLANIL   ELARRL  +G ++T N +HPG + TN+ RH
Sbjct: 218 SRSKLANILFTRELARRL--EGTNVTVNVLHPGIVRTNLGRH 257

Exhibits an oxidoreductive catalytic activity towards retinoids. Most efficient as an NADPH-dependent retinal reductase. Displays high activity toward 9-cis and all-trans-retinol. No steroid dehydrogenase activity detected.

Homo sapiens (taxid: 9606)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: -

>sp|Q8BYK4|RDH12_MOUSE Retinol dehydrogenase 12 OS=Mus musculus GN=Rdh12 PE=2 SV=1

 Score =  146 bits (368), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 89/212 (41%), Positives = 125/212 (58%), Gaps = 10/212 (4%)

Query: 3   IVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSS 62
           +VITGA +GIG ETAR LA RG  V +  RD+  G+     I  +  +++V   +LDLS 
Sbjct: 42  VVITGANTGIGKETARELARRGARVYIACRDVLKGESAASEIRADTKNSQVLVRKLDLSD 101

Query: 63  LASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDT 122
             S+R FA  +  +  +L+ILINNAG+M  P+  + D  E  F  NHLGHFLLT LLL+ 
Sbjct: 102 TKSIRAFAERFLAEEKKLHILINNAGVMMCPYSKTTDGFETHFGVNHLGHFLLTYLLLER 161

Query: 123 MKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANILHANE 182
           +K++A       R++N+SS  H +     IRF  +     Y    AY  SKLAN+L   E
Sbjct: 162 LKESA-----PARVVNLSSIAHLIG---KIRFHDLQGQKRYCSAFAYGHSKLANLLFTRE 213

Query: 183 LARRLKEDGVDITANSVHPGAIATNIIRHNSL 214
           LA+RL+  G  +TA +VHPG + + I R++ L
Sbjct: 214 LAKRLQ--GTGVTAYAVHPGVVLSEITRNSYL 243

Exhibits an oxidoreductive catalytic activity towards retinoids. Most efficient as an NADPH-dependent retinal reductase. Displays high activity toward 9-cis and all-trans-retinol. Also involved in the metabolism of short-chain aldehydes. No steroid dehydrogenase activity detected. Might be the key enzyme in the formation of 11-cis-retinal from 11-cis-retinol during regeneration of the cone visual pigments.

Mus musculus (taxid: 10090)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: -

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	251
224134877	319	predicted protein [Populus trichocarpa]	0.936	0.736	0.754	2e-96
225464515	313	PREDICTED: short-chain dehydrogenase TIC	0.912	0.731	0.745	9e-96
255545238	313	short-chain dehydrogenase, putative [Ric	0.912	0.731	0.737	2e-95
224122326	344	predicted protein [Populus trichocarpa]	0.936	0.683	0.737	9e-95
363814467	313	uncharacterized protein LOC100796920 [Gl	0.912	0.731	0.720	4e-93
356530848	319	PREDICTED: WW domain-containing oxidored	0.924	0.727	0.714	8e-93
388510126	313	unknown [Lotus japonicus]	0.912	0.731	0.733	9e-93
359490488	313	PREDICTED: short-chain dehydrogenase TIC	0.912	0.731	0.716	2e-92
356535857	313	PREDICTED: WW domain-containing oxidored	0.912	0.731	0.707	2e-91
255638322	313	unknown [Glycine max]	0.912	0.731	0.707	3e-91

>gi|224134877|ref|XP_002321927.1| predicted protein [Populus trichocarpa] gi|222868923|gb|EEF06054.1| predicted protein [Populus trichocarpa]

 Score =  357 bits (917), Expect = 2e-96,   Method: Compositional matrix adjust.
 Identities = 178/236 (75%), Positives = 199/236 (84%), Gaps = 1/236 (0%)

Query: 4   VITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSL 63
           ++TGA+SGIGTETARVLALRGVHV+MGVR++AAG+DVKE IVKEIPSAKVDAMELDLSSL
Sbjct: 33  IVTGASSGIGTETARVLALRGVHVIMGVRNMAAGRDVKEAIVKEIPSAKVDAMELDLSSL 92

Query: 64  ASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTM 123
           ASVRNFAS++N   H LN+LINNAGIM  PFMLSKDN+ELQFATN+LGHFLL NLLLDTM
Sbjct: 93  ASVRNFASDFNSSGHPLNLLINNAGIMAPPFMLSKDNMELQFATNYLGHFLLANLLLDTM 152

Query: 124 KKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANILHANEL 183
           KKTA +S  EGRIINVSSE HR  Y EGIRFDKIND SGY  F+AY QSKLAN+LHANEL
Sbjct: 153 KKTALESNREGRIINVSSEFHRYPYPEGIRFDKINDQSGYKKFQAYGQSKLANVLHANEL 212

Query: 184 ARRLKEDGVDITANSVHPGAIATNIIRHNSLFRSMNTILHALPGIAGKCLLKNVQQ 239
            RR KEDGV+ITANS+HPG IATN+ RHN+     N I   L   A + +LKNVQQ
Sbjct: 213 MRRFKEDGVNITANSLHPGVIATNLFRHNTSLADDNPIRVFLES-AARLVLKNVQQ 267

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225464515|ref|XP_002270104.1| PREDICTED: short-chain dehydrogenase TIC 32, chloroplastic [Vitis vinifera] gi|302143828|emb|CBI22689.3| unnamed protein product [Vitis vinifera]

 Score =  355 bits (911), Expect = 9e-96,   Method: Compositional matrix adjust.
 Identities = 176/236 (74%), Positives = 195/236 (82%), Gaps = 7/236 (2%)

Query: 4   VITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSL 63
           ++TGA+SGIGTET RVLALRGVHVVMGVR+++AGK+VKE IVKEIP+AKVDAMELDLSS+
Sbjct: 33  IVTGASSGIGTETTRVLALRGVHVVMGVRNMSAGKEVKEAIVKEIPTAKVDAMELDLSSM 92

Query: 64  ASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTM 123
           ASVR FASEYN     LNILINNAGIM  P+MLSKDNIE+QFATNHLGHFLLTNLLLDTM
Sbjct: 93  ASVRKFASEYNSSGLPLNILINNAGIMAVPYMLSKDNIEMQFATNHLGHFLLTNLLLDTM 152

Query: 124 KKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANILHANEL 183
           KKT RKS  EGRI+NVSS  HR  Y EGIRFDKIND SGY+   AY QSKLAN+LHANEL
Sbjct: 153 KKTTRKSRKEGRIVNVSSMAHRYPYREGIRFDKINDKSGYSSLFAYGQSKLANVLHANEL 212

Query: 184 ARRLKEDGVDITANSVHPGAIATNIIRHNSLFRSMNTILHALPGIAGKCLLKNVQQ 239
           ARR KEDGVDITANS+HPGAI TN+ R +S       I+  L    GK +LKNVQQ
Sbjct: 213 ARRFKEDGVDITANSLHPGAIVTNLFRCSS-------IVSGLVNTVGKLVLKNVQQ 261

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255545238|ref|XP_002513680.1| short-chain dehydrogenase, putative [Ricinus communis] gi|223547588|gb|EEF49083.1| short-chain dehydrogenase, putative [Ricinus communis]

 Score =  354 bits (908), Expect = 2e-95,   Method: Compositional matrix adjust.
 Identities = 174/236 (73%), Positives = 201/236 (85%), Gaps = 7/236 (2%)

Query: 4   VITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSL 63
           ++TGA+SGIGTET RVLA  GVHVVM VR++ +G++VKETI+KEIP+AKVDAMELDLSS+
Sbjct: 33  IVTGASSGIGTETTRVLASCGVHVVMAVRNLVSGRNVKETIIKEIPTAKVDAMELDLSSM 92

Query: 64  ASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTM 123
           ASVR FAS++N     LNILINNAG+M TPFMLSKDNIELQFATNHLGHFLLTNLLLDTM
Sbjct: 93  ASVRKFASDFNSSGLPLNILINNAGVMATPFMLSKDNIELQFATNHLGHFLLTNLLLDTM 152

Query: 124 KKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANILHANEL 183
           KKTA +S  EGRI+NVSSE HR +YHEGIRFDKIND SGY+ FRAY QSKLAN+LHANEL
Sbjct: 153 KKTAHQSNREGRIVNVSSEAHRYSYHEGIRFDKINDRSGYSSFRAYGQSKLANVLHANEL 212

Query: 184 ARRLKEDGVDITANSVHPGAIATNIIRHNSLFRSMNTILHALPGIAGKCLLKNVQQ 239
            RRLKEDGV+ITANS+HPGAI TN+ RH      MN I++ +  + GK +LKNVQQ
Sbjct: 213 TRRLKEDGVNITANSLHPGAIVTNLFRH------MN-IINGMVNVLGKLVLKNVQQ 261

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224122326|ref|XP_002318807.1| predicted protein [Populus trichocarpa] gi|222859480|gb|EEE97027.1| predicted protein [Populus trichocarpa]

 Score =  352 bits (903), Expect = 9e-95,   Method: Compositional matrix adjust.
 Identities = 174/236 (73%), Positives = 198/236 (83%), Gaps = 1/236 (0%)

Query: 4   VITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSL 63
           ++TGA+SGIGTETARVLALRGVHV+MGVR++A+G+DVK+ ++KEIP+AKVD MELDLSSL
Sbjct: 73  IVTGASSGIGTETARVLALRGVHVIMGVRNMASGRDVKDAMIKEIPTAKVDVMELDLSSL 132

Query: 64  ASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTM 123
           ASVR FAS++N     LN+LINNAGIM TPFMLSKDNIELQFATNHLGHFLLTNLLLDTM
Sbjct: 133 ASVRKFASDFNSSGRPLNLLINNAGIMATPFMLSKDNIELQFATNHLGHFLLTNLLLDTM 192

Query: 124 KKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANILHANEL 183
           KKTAR+S  EGRI+NVSSE HR  Y EGIRFD IND SGY  F AY QSKLAN+LHANEL
Sbjct: 193 KKTARESDIEGRIVNVSSEFHRYPYPEGIRFDNINDQSGYKRFLAYGQSKLANVLHANEL 252

Query: 184 ARRLKEDGVDITANSVHPGAIATNIIRHNSLFRSMNTILHALPGIAGKCLLKNVQQ 239
            RR KEDGV+ITANS+HPG IATN+ RHN    + N I   L  +AG  +LKNVQQ
Sbjct: 253 TRRFKEDGVNITANSLHPGVIATNLFRHNMSLANDNPIRVFLKSLAG-LVLKNVQQ 307

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|363814467|ref|NP_001242868.1| uncharacterized protein LOC100796920 [Glycine max] gi|255638702|gb|ACU19656.1| unknown [Glycine max]

 Score =  346 bits (888), Expect = 4e-93,   Method: Compositional matrix adjust.
 Identities = 170/236 (72%), Positives = 194/236 (82%), Gaps = 7/236 (2%)

Query: 4   VITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSL 63
           ++TGA+SGIGTET RVLALRGVHV+MGVR++ A KDVKETI+KEIPSAKVDAMELDLSS+
Sbjct: 33  IVTGASSGIGTETTRVLALRGVHVIMGVRNMLAAKDVKETILKEIPSAKVDAMELDLSSM 92

Query: 64  ASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTM 123
            SVR FASE+      LNILINNAGIM  PF LSKD IELQFATNH+GHFLLTNLLLDT+
Sbjct: 93  KSVRKFASEFKSSGLPLNILINNAGIMACPFSLSKDKIELQFATNHIGHFLLTNLLLDTI 152

Query: 124 KKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANILHANEL 183
           KKT+R+S  EGRI+NVSSE HR AY EGI FDKIND S Y+ +RAY QSKLANILHANEL
Sbjct: 153 KKTSRESKKEGRIVNVSSEAHRFAYSEGICFDKINDESSYDNWRAYGQSKLANILHANEL 212

Query: 184 ARRLKEDGVDITANSVHPGAIATNIIRHNSLFRSMNTILHALPGIAGKCLLKNVQQ 239
            RRLKEDGVDI+ANS+HPG I TN+ RHNS        ++ L  + G+ +LKNVQQ
Sbjct: 213 TRRLKEDGVDISANSLHPGTITTNLFRHNS-------AVNGLINVIGRLVLKNVQQ 261

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356530848|ref|XP_003533991.1| PREDICTED: WW domain-containing oxidoreductase [Glycine max]

 Score =  345 bits (886), Expect = 8e-93,   Method: Compositional matrix adjust.
 Identities = 173/242 (71%), Positives = 198/242 (81%), Gaps = 10/242 (4%)

Query: 1   MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDL 60
           +D VITGA+SGIG ET RVLA+RGVHV+MGV+++ A K++KETI+K IPSAKVDAMELDL
Sbjct: 33  LDNVITGASSGIGAETTRVLAMRGVHVIMGVKNMNAAKNIKETILKGIPSAKVDAMELDL 92

Query: 61  SSLASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLL 120
           SS+ SVR FASE+      LNILINNAGI GTPFMLS+DNIELQFATNH+GHFLLTNLLL
Sbjct: 93  SSMTSVRKFASEFISSSLPLNILINNAGIFGTPFMLSEDNIELQFATNHIGHFLLTNLLL 152

Query: 121 DTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANILHA 180
           DTMKKT  +S  +GRI+NVSS+GH+  Y EGI FDK+ND S Y  FRAY QSKLANILHA
Sbjct: 153 DTMKKTTHESKKQGRIVNVSSQGHQFTYREGILFDKLNDQSSYQAFRAYGQSKLANILHA 212

Query: 181 NELARRLKEDGVDITANSVHPGAIATNIIRHNSLFRSMNTILHALPGIAGKCL---LKNV 237
           NELARRLKEDGVDITANS+HPGAIATNI R+NS       +L  LPG+  K L   +KNV
Sbjct: 213 NELARRLKEDGVDITANSLHPGAIATNIHRYNS-------VLTGLPGVVKKLLSYVVKNV 265

Query: 238 QQ 239
           QQ
Sbjct: 266 QQ 267

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388510126|gb|AFK43129.1| unknown [Lotus japonicus]

 Score =  345 bits (885), Expect = 9e-93,   Method: Compositional matrix adjust.
 Identities = 173/236 (73%), Positives = 196/236 (83%), Gaps = 7/236 (2%)

Query: 4   VITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSL 63
           V+TGA+SGIGTET RVLA RGVHV+MGVR+ AAGKDVKETI+KE PSAKVDAMELDLSS+
Sbjct: 33  VVTGASSGIGTETTRVLAKRGVHVIMGVRNTAAGKDVKETILKENPSAKVDAMELDLSSM 92

Query: 64  ASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTM 123
            SV+ FASEY      LNILINNAGIM  PFMLSKDN ELQFATNHLGHFLLTNLLLDTM
Sbjct: 93  ESVKKFASEYKSSGLPLNILINNAGIMACPFMLSKDNHELQFATNHLGHFLLTNLLLDTM 152

Query: 124 KKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANILHANEL 183
           KKT+R+S  EGRI+ VSSE HR AY EGIRFDKIND S YN +RAY QSKLANILHANEL
Sbjct: 153 KKTSRESKKEGRIVIVSSEAHRFAYSEGIRFDKINDQSSYNNWRAYGQSKLANILHANEL 212

Query: 184 ARRLKEDGVDITANSVHPGAIATNIIRHNSLFRSMNTILHALPGIAGKCLLKNVQQ 239
            + LKEDGVDITANS+HPG I TN+ R+NS   ++N I++    + G+ ++KNVQQ
Sbjct: 213 TKHLKEDGVDITANSLHPGTITTNLFRYNS---AVNGIIN----VVGRMVMKNVQQ 261

Source: Lotus japonicus

Species: Lotus japonicus

Genus: Lotus

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359490488|ref|XP_002272242.2| PREDICTED: short-chain dehydrogenase TIC 32, chloroplastic-like [Vitis vinifera] gi|147792549|emb|CAN65620.1| hypothetical protein VITISV_040852 [Vitis vinifera] gi|302143827|emb|CBI22688.3| unnamed protein product [Vitis vinifera]

 Score =  344 bits (883), Expect = 2e-92,   Method: Compositional matrix adjust.
 Identities = 169/236 (71%), Positives = 197/236 (83%), Gaps = 7/236 (2%)

Query: 4   VITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSL 63
           ++TGA+SGIGTETARVLALRGVHVVM VR++AAG++VKE I KEIP+AK+DAMELDLSS+
Sbjct: 33  IVTGASSGIGTETARVLALRGVHVVMAVRNMAAGREVKEAIAKEIPTAKIDAMELDLSSM 92

Query: 64  ASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTM 123
           ASVR FASE++     LN+LINNAG+M TPFMLSKDNIELQFATNH+GHFLLTNLLL+TM
Sbjct: 93  ASVRKFASEFSSSGLPLNLLINNAGLMATPFMLSKDNIELQFATNHIGHFLLTNLLLETM 152

Query: 124 KKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANILHANEL 183
           KKTAR+S  EGRI+NVSS  HR +YHEGIRFD IND SGYN   AY QSKLAN+LHANEL
Sbjct: 153 KKTARESNKEGRIVNVSSRRHRFSYHEGIRFDMINDQSGYNRLSAYGQSKLANVLHANEL 212

Query: 184 ARRLKEDGVDITANSVHPGAIATNIIRHNSLFRSMNTILHALPGIAGKCLLKNVQQ 239
           +RRLK+DG +ITANS+HPGAIATN+ RH  L       +     I GK ++KNVQQ
Sbjct: 213 SRRLKDDGANITANSLHPGAIATNLFRHVPL-------VGGFIDIFGKYVVKNVQQ 261

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356535857|ref|XP_003536459.1| PREDICTED: WW domain-containing oxidoreductase-like [Glycine max]

 Score =  340 bits (873), Expect = 2e-91,   Method: Compositional matrix adjust.
 Identities = 167/236 (70%), Positives = 193/236 (81%), Gaps = 7/236 (2%)

Query: 4   VITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSL 63
           ++TGA+SGIGTET+RVLALRGVHV+MGVR++ A KDVKE I+KEIPSAKVDAMELDL S+
Sbjct: 33  IVTGASSGIGTETSRVLALRGVHVIMGVRNMLAAKDVKEKILKEIPSAKVDAMELDLGSM 92

Query: 64  ASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTM 123
            SV+ FAS +      LNILINNAGIM  PF LSKD IELQFATNH+GHFLLTNLLLDT+
Sbjct: 93  ESVKKFASAFKSSGLPLNILINNAGIMACPFSLSKDKIELQFATNHIGHFLLTNLLLDTI 152

Query: 124 KKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANILHANEL 183
           +KT+R+S  EGRI+NVSSE HR AY EGIRF+KIND S YN +RAY QSKLANILHANEL
Sbjct: 153 EKTSRESKKEGRIVNVSSEAHRFAYSEGIRFNKINDESSYNNWRAYGQSKLANILHANEL 212

Query: 184 ARRLKEDGVDITANSVHPGAIATNIIRHNSLFRSMNTILHALPGIAGKCLLKNVQQ 239
            RRLKEDGVDI+ANS+HPG I TN+ RHNS        ++ L  + GK +LKNVQQ
Sbjct: 213 TRRLKEDGVDISANSLHPGTITTNLFRHNS-------AVNGLINVIGKLVLKNVQQ 261

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255638322|gb|ACU19473.1| unknown [Glycine max]

 Score =  340 bits (873), Expect = 3e-91,   Method: Compositional matrix adjust.
 Identities = 167/236 (70%), Positives = 193/236 (81%), Gaps = 7/236 (2%)

Query: 4   VITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSL 63
           ++TGA+SGIGTET+RVLALRGVHV+MGVR++ A KDVKE I+KEIPSAKVDAMELDL S+
Sbjct: 33  IVTGASSGIGTETSRVLALRGVHVIMGVRNMLAAKDVKEKILKEIPSAKVDAMELDLGSM 92

Query: 64  ASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTM 123
            SV+ FAS +      LNILINNAGIM  PF LSKD IELQFATNH+GHFLLTNLLLDT+
Sbjct: 93  ESVKKFASAFKSSGLPLNILINNAGIMACPFSLSKDKIELQFATNHIGHFLLTNLLLDTI 152

Query: 124 KKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANILHANEL 183
           +KT+R+S  EGRI+NVSSE HR AY EGIRF+KIND S YN +RAY QSKLANILHANEL
Sbjct: 153 EKTSRESKKEGRIVNVSSEAHRFAYSEGIRFNKINDESSYNNWRAYGQSKLANILHANEL 212

Query: 184 ARRLKEDGVDITANSVHPGAIATNIIRHNSLFRSMNTILHALPGIAGKCLLKNVQQ 239
            RRLKEDGVDI+ANS+HPG I TN+ RHNS        ++ L  + GK +LKNVQQ
Sbjct: 213 TRRLKEDGVDISANSLHPGTITTNLFRHNS-------AVNGLINVIGKLVLKNVQQ 261

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	251
TAIR|locus:2117969	322	Tic32-IVa "translocon at the i	0.916	0.714	0.605	2.1e-68
TAIR|locus:2123066	317	AT4G11410 [Arabidopsis thalian	0.912	0.722	0.593	1.7e-66
TAIR|locus:2181778	331	AT5G02540 [Arabidopsis thalian	0.840	0.637	0.545	2e-56
TAIR|locus:2040676	321	AT2G37540 [Arabidopsis thalian	0.912	0.713	0.489	2.6e-54
TAIR|locus:2170071	339	AT5G50130 [Arabidopsis thalian	0.912	0.675	0.483	2.1e-45
TAIR|locus:2134971	332	AT4G24050 [Arabidopsis thalian	0.824	0.623	0.430	4.8e-39
TAIR|locus:2019474	334	AT1G64590 [Arabidopsis thalian	0.824	0.619	0.416	2.1e-36
UNIPROTKB|O53726	311	Rv0439c "PROBABLE DEHYDROGENAS	0.860	0.694	0.397	4.1e-33
ZFIN|ZDB-GENE-040718-9	320	rdh12 "retinol dehydrogenase 1	0.800	0.628	0.388	4.1e-33
FB|FBgn0050491	331	CG30491 [Drosophila melanogast	0.844	0.640	0.383	5.2e-33

TAIR|locus:2117969 Tic32-IVa "translocon at the inner envelope membrane of chloroplasts 32-IVa" [Arabidopsis thaliana (taxid:3702)]

 Score = 694 (249.4 bits), Expect = 2.1e-68, P = 2.1e-68
 Identities = 143/236 (60%), Positives = 170/236 (72%)

Query:     4 VITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSL 63
             ++TGA+SGIG ETARVL+LRGVHVVM VR+  +G  VKE IVK++P AK+D MELDLSS+
Sbjct:    33 IVTGASSGIGVETARVLSLRGVHVVMAVRNTDSGAKVKEDIVKQVPGAKLDVMELDLSSM 92

Query:    64 ASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQFAXXXXXXXXXXXXXXDTM 123
              SVR FASEY      LN+LINNAGIM  PFMLSKDNIELQFA              DTM
Sbjct:    93 QSVRKFASEYKSTGLPLNLLINNAGIMACPFMLSKDNIELQFATNHLGHFLLTKLLLDTM 152

Query:   124 KKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANILHANEL 183
             K T+R+S  EGRI+N+SSE HR +Y EG+RFDKIND S Y+  RAY QSKL N+LHANEL
Sbjct:   153 KSTSRESKREGRIVNLSSEAHRFSYPEGVRFDKINDKSSYSSMRAYGQSKLCNVLHANEL 212

Query:   184 ARRLKEDGVDITANSVHPGAIATNIIRHNSLFRSMNTILHALPGIAGKCLLKNVQQ 239
              ++LKEDGV+ITANS+HPGAI TN+ R+       N  L    G   K +LK+V Q
Sbjct:   213 TKQLKEDGVNITANSLHPGAIMTNLGRY------FNPYLAVAVGAVAKYILKSVPQ 262

GO:0000166 "nucleotide binding" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA;ISS

GO:0009706 "chloroplast inner membrane" evidence=IDA

GO:0009941 "chloroplast envelope" evidence=IDA

GO:0009507 "chloroplast" evidence=IDA

GO:0005886 "plasma membrane" evidence=IDA

TAIR|locus:2123066 AT4G11410 [Arabidopsis thaliana (taxid:3702)]

 Score = 676 (243.0 bits), Expect = 1.7e-66, P = 1.7e-66
 Identities = 140/236 (59%), Positives = 174/236 (73%)

Query:     4 VITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSL 63
             ++TGA+SGIG ET RVLALRGVHVVM VR+  +G  V++ I+KEIP AK+D M+LDLSS+
Sbjct:    33 IVTGASSGIGEETTRVLALRGVHVVMAVRNTDSGNQVRDKILKEIPQAKIDVMKLDLSSM 92

Query:    64 ASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQFAXXXXXXXXXXXXXXDTM 123
             ASVR+FASEY      LN+LINNAGIM  PF+LS DNIELQFA              + M
Sbjct:    93 ASVRSFASEYQSLDLPLNLLINNAGIMACPFLLSSDNIELQFATNHLGHFLLTNLLLERM 152

Query:   124 KKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANILHANEL 183
             KKTA +S  EGRI+ VSSEGHR AY EG++FDKIND + YN  +AY QSKL NILHA EL
Sbjct:   153 KKTASESNREGRIVIVSSEGHRFAYREGVQFDKINDEARYNTLQAYGQSKLGNILHATEL 212

Query:   184 ARRLKEDGVDITANSVHPGAIATNIIRHNSLFRSMNTILHALPGIAGKCLLKNVQQ 239
             AR  KE GV+ITANS+HPG+I TN++R++S    +NTI +A+    GK +LK++ Q
Sbjct:   213 ARLFKEQGVNITANSLHPGSIMTNLLRYHSF---INTIGNAV----GKYVLKSIPQ 261

GO:0000166 "nucleotide binding" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA

GO:0009507 "chloroplast" evidence=ISM

GO:0016491 "oxidoreductase activity" evidence=IEA;ISS

TAIR|locus:2181778 AT5G02540 [Arabidopsis thaliana (taxid:3702)]

 Score = 581 (209.6 bits), Expect = 2.0e-56, P = 2.0e-56
 Identities = 115/211 (54%), Positives = 150/211 (71%)

Query:     4 VITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSL 63
             +ITG T GIG ETARVL+ RG HVV+G R++ A ++ K  I+++  +A+V  ++LDLSS+
Sbjct:    37 IITGGTGGIGMETARVLSKRGAHVVIGARNMGAAENAKTEILRQNANARVTLLQLDLSSI 96

Query:    64 ASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQFAXXXXXXXXXXXXXXDTM 123
              S++ F  E++  H  LN+LINNAG+M  P+ LS+D IELQFA              DTM
Sbjct:    97 KSIKAFVREFHALHLPLNLLINNAGVMFCPYQLSEDGIELQFATNHIGHFLLTNLLLDTM 156

Query:   124 KKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANILHANEL 183
             K TA+ SG EGRI+NVSS  H   Y EGI+FD IND   Y+  RAY QSKLANILHANEL
Sbjct:   157 KNTAKTSGVEGRILNVSSVAHIYTYQEGIQFDSINDICSYSDKRAYGQSKLANILHANEL 216

Query:   184 ARRLKEDGVDITANSVHPGAIATNIIRHNSL 214
             +R+L+E+GV+ITANSVHPG I TN+ +H +L
Sbjct:   217 SRQLQEEGVNITANSVHPGLILTNLFQHTAL 247

GO:0000166 "nucleotide binding" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA;ISS

TAIR|locus:2040676 AT2G37540 [Arabidopsis thaliana (taxid:3702)]

 Score = 561 (202.5 bits), Expect = 2.6e-54, P = 2.6e-54
 Identities = 115/235 (48%), Positives = 159/235 (67%)

Query:     4 VITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSL 63
             +ITG TSGIG E ARVLA+RG HV++  R+  A  + KE I++  P+A+VD +++D+SS+
Sbjct:    37 IITGGTSGIGLEAARVLAMRGAHVIIAARNPKAANESKEMILQMNPNARVDYLQIDVSSI 96

Query:    64 ASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQFAXXXXXXXXXXXXXXDTM 123
              SVR+F  ++   +  LNILINNAG+M  PF L++D IE QFA              D M
Sbjct:    97 KSVRSFVDQFLALNVPLNILINNAGVMFCPFKLTEDGIESQFATNHIGHFLLTNLLLDKM 156

Query:   124 KKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANILHANEL 183
             K TAR+SG +GRI+N+SS  H   Y EGI+F  INDP+GY+  RAY QSKL+N+LH+N L
Sbjct:   157 KSTARESGVQGRIVNLSSIAHTYTYSEGIKFQGINDPAGYSERRAYGQSKLSNLLHSNAL 216

Query:   184 ARRLKEDGVDITANSVHPGAIATNIIRHNS----LFRSMNTILHA-LP-GIAGKC 232
             +RRL+E+GV+IT NSVHPG + TN+ R++     +FR+M  +    +P G A  C
Sbjct:   217 SRRLQEEGVNITINSVHPGLVTTNLFRYSGFSMKVFRAMTFLFWKNIPQGAATTC 271

GO:0000166 "nucleotide binding" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA;ISS

GO:0009860 "pollen tube growth" evidence=IEP

TAIR|locus:2170071 AT5G50130 [Arabidopsis thaliana (taxid:3702)]

 Score = 477 (173.0 bits), Expect = 2.1e-45, P = 2.1e-45
 Identities = 115/238 (48%), Positives = 144/238 (60%)

Query:     4 VITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSL 63
             +ITG TSGIG ETARVLA RGV VVM VRD+   + VKE I++E P A +   E+DLSSL
Sbjct:    40 IITGGTSGIGAETARVLAKRGVRVVMAVRDMKKAEMVKERIIRENPEADIILFEIDLSSL 99

Query:    64 ASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQFAXXXXXXXXXXXXXXDTM 123
             +SV  F S++  Q   LNILINNAG+       S++ IEL FA              + M
Sbjct:   100 SSVARFCSQFLSQDLPLNILINNAGVFSPNLEFSEEKIELTFATNFLGHYLLTEMLIEKM 159

Query:   124 KKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDP-SGYNGFRAYSQSKLANILHANE 182
               TA KSG EGRIIN+SS  H     +   F K+  P S YNG RAY+QSKLA ILHA  
Sbjct:   160 IDTAEKSGIEGRIINLSSVIHNWVKPDCFSFPKLLHPISRYNGTRAYAQSKLATILHAKA 219

Query:   183 LARRLKEDGVDITANSVHPGAIATNIIR-HNSLFRSMNTILHALPGIAGKCLLKNVQQ 239
             L+++LK+   ++T N+VHPG + T IIR H  LF        +L  IA K LLK++ Q
Sbjct:   220 LSKQLKDRNANVTINAVHPGIVKTGIIRAHKGLFTD------SLFLIASK-LLKSISQ 270

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0008152 "metabolic process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA;ISS

TAIR|locus:2134971 AT4G24050 [Arabidopsis thaliana (taxid:3702)]

 Score = 417 (151.9 bits), Expect = 4.8e-39, P = 4.8e-39
 Identities = 90/209 (43%), Positives = 130/209 (62%)

Query:     4 VITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSL 63
             VITGATSGIG ETARVLA RG  ++   R++ A ++ KE IV E P  ++  M+LDLSS+
Sbjct:    38 VITGATSGIGAETARVLAKRGARLIFPARNVKAAEEAKERIVSEFPETEIVVMKLDLSSI 97

Query:    64 ASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQFAXXXXXXXXXXXXXXDTM 123
             ASVRNF +++      LN+LINNAG +     +S+D IE+ FA              + M
Sbjct:    98 ASVRNFVADFESLDLPLNLLINNAGKLAHEHAISEDGIEMTFATNYLGHFLLTNLLLNKM 157

Query:   124 KKTARKSGGEGRIINVSSEGHRLAYHEGIRFDK-INDPS-GYNGFRAYSQSKLANILHAN 181
              +TA ++G +GRI+NV+S  H     + I + + I+ P   ++  RAY+ SKLAN+LH  
Sbjct:   158 IQTAEETGVQGRIVNVTSGIHGWFSGDLIEYLRLISQPKCQFDATRAYALSKLANVLHTK 217

Query:   182 ELARRLKEDGVDITANSVHPGAIATNIIR 210
             EL+ RL++ G ++T N VHPG + T + R
Sbjct:   218 ELSSRLQKIGANVTVNCVHPGVVRTRLTR 246

GO:0000166 "nucleotide binding" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA;ISS

TAIR|locus:2019474 AT1G64590 [Arabidopsis thaliana (taxid:3702)]

 Score = 392 (143.0 bits), Expect = 2.1e-36, P = 2.1e-36
 Identities = 87/209 (41%), Positives = 122/209 (58%)

Query:     4 VITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSL 63
             +ITGATSGIG ETARVLA RG  +V+  R +   ++ K  I+ E P A++  M LDLSSL
Sbjct:    38 IITGATSGIGAETARVLAKRGARLVLPARSVKTAEETKARILSEFPDAEIIVMHLDLSSL 97

Query:    64 ASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQFAXXXXXXXXXXXXXXDTM 123
              SVR F  ++   +  LNILINNAG       LS+D +E+ FA                M
Sbjct:    98 TSVRRFVDDFESLNLPLNILINNAGKYAHKHALSEDGVEMTFATNYLGHFLLTKLLLKKM 157

Query:   124 KKTARKSGGEGRIINVSSEGHRLAYHEGIRF--DKINDPSGYNGFRAYSQSKLANILHAN 181
              +TA ++G +GRI+NV+S  H     + +++  D   +   Y+  RAY+ SKLAN+LH  
Sbjct:   158 IETAAQTGVQGRIVNVTSVVHSWFSGDMLQYLADISRNNRNYDATRAYALSKLANVLHTV 217

Query:   182 ELARRLKEDGVDITANSVHPGAIATNIIR 210
             EL+R L +   ++TAN VHPG + T + R
Sbjct:   218 ELSRLLHKMDANVTANCVHPGIVKTRLTR 246

GO:0000166 "nucleotide binding" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA;ISS

UNIPROTKB|O53726 Rv0439c "PROBABLE DEHYDROGENASE/REDUCTASE" [Mycobacterium tuberculosis H37Rv (taxid:83332)]

 Score = 361 (132.1 bits), Expect = 4.1e-33, P = 4.1e-33
 Identities = 89/224 (39%), Positives = 118/224 (52%)

Query:     3 IVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSS 62
             +V+TGA +GIG  TA V A RG HVV+ VR++  G   +  I+   P A V   +LDL S
Sbjct:    24 VVVTGANTGIGYHTAAVFADRGAHVVLAVRNLEKGNAARARIMAARPGAHVTLQQLDLCS 83

Query:    63 LASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQFAXXXXXXXXXXXXXXDT 122
             L SVR  A      + ++++LINNAG+M TP  ++KD  ELQF               D 
Sbjct:    84 LDSVRAAADALRTAYPRIDVLINNAGVMWTPKQVTKDGFELQFGTNHLGHFALTGLVLDH 143

Query:   123 MKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANILHANE 182
             M        G  R++ VSS+GHR+  H  I FD +     YN   AY Q+KLAN+L   E
Sbjct:   144 MLPVP----GS-RVVTVSSQGHRI--HAAIHFDDLQWERRYNRVAAYGQAKLANLLFTYE 196

Query:   183 LARRLKEDGVDITANSVHPGAIATNIIRH-NSLFRSMNTILHAL 225
             L RRL E G    A + HPG   T + R+   L R + T+L  L
Sbjct:   197 LQRRLGEAGKSTIAVAAHPGGSNTELTRNLPRLIRPVATVLGPL 240

GO:0005886 "plasma membrane" evidence=IDA

ZFIN|ZDB-GENE-040718-9 rdh12 "retinol dehydrogenase 12 (all-trans and 9-cis)" [Danio rerio (taxid:7955)]

 Score = 361 (132.1 bits), Expect = 4.1e-33, P = 4.1e-33
 Identities = 82/211 (38%), Positives = 117/211 (55%)

Query:     4 VITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSL 63
             ++TGA SGIG ETA  LA RG  V++  RD+   ++    I   +  AKV+  ELDL+  
Sbjct:    47 LVTGANSGIGKETALDLASRGARVILACRDLEKAEEAAAEIRTRVGGAKVEVRELDLADC 106

Query:    64 ASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQFAXXXXXXXXXXXXXXDTM 123
              S+R FA  +  +   L+ILINNAG+M  P+M + D  E+Q                  +
Sbjct:   107 CSIRAFAQRFLREVDHLHILINNAGVMMCPYMKTADGFEMQIGVNHLGHYLLTYLLIGLL 166

Query:   124 KKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANILHANEL 183
             K++A       RI+ VSS  H   +   IRF  ++    YN   AY QSKLAN+L   EL
Sbjct:   167 KRSA-----PSRIVVVSSLAHNFGW---IRFHDLHSQGSYNSGLAYCQSKLANVLFTREL 218

Query:   184 ARRLKEDGVDITANSVHPGAIATNIIRHNSL 214
             ARRL+  G ++T NSVHPG + + ++RH++L
Sbjct:   219 ARRLQ--GSNVTVNSVHPGTVRSELVRHSTL 247

GO:0008152 "metabolic process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

FB|FBgn0050491 CG30491 [Drosophila melanogaster (taxid:7227)]

 Score = 360 (131.8 bits), Expect = 5.2e-33, P = 5.2e-33
 Identities = 86/224 (38%), Positives = 124/224 (55%)

Query:     4 VITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSL 63
             ++TGA +GIG ET R +A RG  V M  R++   ++ +E IV E  +  V   + DL+S 
Sbjct:    49 IVTGANTGIGKETVREIAKRGGTVYMACRNLKKCEEAREEIVLETKNKYVYCRQCDLASQ 108

Query:    64 ASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQFAXXXXXXXXXXXXXXDTM 123
              S+R+F + +  +   L++LINNAG+M  P  L+ D IELQ                D +
Sbjct:   109 ESIRHFVAAFKREQEHLHVLINNAGVMRCPRSLTSDGIELQLGVNHMGHFLLTNLLLDLL 168

Query:   124 KKTARKSGGEGRIINVSSEGHRLAYHEG-IRFDKINDPSGYNGFRAYSQSKLANILHANE 182
             KK++       RI+NVSS    LA+  G I    +N    Y+  +AYSQSKLAN+L   E
Sbjct:   169 KKSS-----PSRIVNVSS----LAHTRGEINTGDLNSDKSYDEGKAYSQSKLANVLFTRE 219

Query:   183 LARRLKEDGVDITANSVHPGAIATNIIRHNSLFRSMNTILHALP 226
             LA+RL  +G ++TAN++HPG + T IIRH   F +    L   P
Sbjct:   220 LAKRL--EGTNVTANALHPGVVDTEIIRHMGFFNNFFAGLFVKP 261

GO:0008152 "metabolic process" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q6RVV4	TIC32_PEA	1, ., 1, ., 1, ., -	0.7033	0.9123	0.7246	N/A	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	1.1.1	LOW CONFIDENCE prediction!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	251
cd05327	269	cd05327, retinol-DH_like_SDR_c_like, retinol dehyd	4e-90
PRK06197	306	PRK06197, PRK06197, short chain dehydrogenase; Pro	3e-75
cd09807	274	cd09807, retinol-DH_like_SDR_c, retinol dehydrogen	2e-72
PRK06196	315	PRK06196, PRK06196, oxidoreductase; Provisional	3e-64
cd09809	284	cd09809, human_WWOX_like_SDR_c-like, human WWOX (W	2e-54
PRK05854	313	PRK05854, PRK05854, short chain dehydrogenase; Pro	3e-48
cd09810	311	cd09810, LPOR_like_SDR_c_like, light-dependent pro	5e-44
PRK07453	322	PRK07453, PRK07453, protochlorophyllide oxidoreduc	1e-36
cd05233	234	cd05233, SDR_c, classical (c) SDRs	2e-35
PLN00015	308	PLN00015, PLN00015, protochlorophyllide reductase	6e-35
TIGR01289	314	TIGR01289, LPOR, light-dependent protochlorophylli	4e-34
COG1028	251	COG1028, FabG, Dehydrogenases with different speci	1e-31
cd05324	225	cd05324, carb_red_PTCR-like_SDR_c, Porcine testicu	4e-29
PRK05653	246	PRK05653, fabG, 3-ketoacyl-(acyl-carrier-protein)	1e-28
cd09808	255	cd09808, DHRS-12_like_SDR_c-like, human dehydrogen	8e-25
PRK12826	251	PRK12826, PRK12826, 3-ketoacyl-(acyl-carrier-prote	2e-24
cd05325	233	cd05325, carb_red_sniffer_like_SDR_c, carbonyl red	1e-23
COG0300	265	COG0300, DltE, Short-chain dehydrogenases of vario	5e-23
cd05332	257	cd05332, 11beta-HSD1_like_SDR_c, 11beta-hydroxyste	8e-23
cd08951	260	cd08951, DR_C-13_KR_SDR_c_like, daunorubicin C-13	1e-22
cd05374	248	cd05374, 17beta-HSD-like_SDR_c, 17beta hydroxyster	2e-22
COG4221	246	COG4221, COG4221, Short-chain alcohol dehydrogenas	4e-22
PRK05565	247	PRK05565, fabG, 3-ketoacyl-(acyl-carrier-protein)	4e-21
PRK12825	249	PRK12825, fabG, 3-ketoacyl-(acyl-carrier-protein)	1e-20
cd08932	223	cd08932, HetN_like_SDR_c, HetN oxidoreductase-like	1e-19
cd05323	244	cd05323, ADH_SDR_c_like, insect type alcohol dehyd	3e-19
PRK05557	248	PRK05557, fabG, 3-ketoacyl-(acyl-carrier-protein)	9e-19
PRK06914	280	PRK06914, PRK06914, short chain dehydrogenase; Pro	1e-18
PRK07231	251	PRK07231, fabG, 3-ketoacyl-(acyl-carrier-protein)	3e-18
cd05370	228	cd05370, SDR_c2, classical (c) SDR, subgroup 2	4e-18
cd05339	243	cd05339, 17beta-HSDXI-like_SDR_c, human 17-beta-hy	5e-18
cd05333	240	cd05333, BKR_SDR_c, beta-Keto acyl carrier protein	1e-17
pfam00106	167	pfam00106, adh_short, short chain dehydrogenase	1e-17
TIGR01830	239	TIGR01830, 3oxo_ACP_reduc, 3-oxoacyl-(acyl-carrier	2e-17
cd05362	243	cd05362, THN_reductase-like_SDR_c, tetrahydroxynap	3e-17
cd05364	253	cd05364, SDR_c11, classical (c) SDR, subgroup 11	6e-17
PRK12939	250	PRK12939, PRK12939, short chain dehydrogenase; Pro	7e-17
PRK08589	272	PRK08589, PRK08589, short chain dehydrogenase; Val	7e-17
cd08941	290	cd08941, 3KS_SDR_c, 3-keto steroid reductase, clas	1e-16
PRK07825	273	PRK07825, PRK07825, short chain dehydrogenase; Pro	2e-16
cd05358	253	cd05358, GlcDH_SDR_c, glucose 1 dehydrogenase (Glc	2e-16
PRK08017	256	PRK08017, PRK08017, oxidoreductase; Provisional	2e-16
cd05326	249	cd05326, secoisolariciresinol-DH_like_SDR_c, secoi	2e-16
PRK06179	270	PRK06179, PRK06179, short chain dehydrogenase; Pro	9e-16
PRK12829	264	PRK12829, PRK12829, short chain dehydrogenase; Pro	1e-15
PRK09730	247	PRK09730, PRK09730, putative NAD(P)-binding oxidor	2e-15
cd05344	253	cd05344, BKR_like_SDR_like, putative beta-ketoacyl	2e-15
cd05367	241	cd05367, SPR-like_SDR_c, sepiapterin reductase (SP	2e-15
PRK12828	239	PRK12828, PRK12828, short chain dehydrogenase; Pro	2e-15
cd05346	249	cd05346, SDR_c5, classical (c) SDR, subgroup 5	2e-15
PRK12824	245	PRK12824, PRK12824, acetoacetyl-CoA reductase; Pro	6e-15
cd08930	250	cd08930, SDR_c8, classical (c) SDR, subgroup 8	8e-15
PRK05993	277	PRK05993, PRK05993, short chain dehydrogenase; Pro	1e-14
TIGR02632	676	TIGR02632, RhaD_aldol-ADH, rhamnulose-1-phosphate	2e-14
PRK05855	582	PRK05855, PRK05855, short chain dehydrogenase; Val	2e-14
cd05341	247	cd05341, 3beta-17beta-HSD_like_SDR_c, 3beta17beta	3e-14
PRK09291	257	PRK09291, PRK09291, short chain dehydrogenase; Pro	3e-14
PRK05866	293	PRK05866, PRK05866, short chain dehydrogenase; Pro	3e-14
PRK06949	258	PRK06949, PRK06949, short chain dehydrogenase; Pro	1e-13
PRK06182	273	PRK06182, PRK06182, short chain dehydrogenase; Val	1e-13
PRK12743	256	PRK12743, PRK12743, oxidoreductase; Provisional	1e-13
PRK12827	249	PRK12827, PRK12827, short chain dehydrogenase; Pro	1e-13
COG3967	245	COG3967, DltE, Short-chain dehydrogenase involved	2e-13
PRK07201	657	PRK07201, PRK07201, short chain dehydrogenase; Pro	2e-13
PRK12937	245	PRK12937, PRK12937, short chain dehydrogenase; Pro	4e-13
PRK08264	238	PRK08264, PRK08264, short chain dehydrogenase; Val	4e-13
PRK08324	681	PRK08324, PRK08324, short chain dehydrogenase; Val	4e-13
cd08943	250	cd08943, R1PA_ADH_SDR_c, rhamnulose-1-phosphate al	5e-13
cd05360	233	cd05360, SDR_c3, classical (c) SDR, subgroup 3	6e-13
cd05359	242	cd05359, ChcA_like_SDR_c, 1-cyclohexenylcarbonyl_c	8e-13
PRK06947	248	PRK06947, PRK06947, glucose-1-dehydrogenase; Provi	1e-12
cd05350	239	cd05350, SDR_c6, classical (c) SDR, subgroup 6	2e-12
cd05354	235	cd05354, SDR_c7, classical (c) SDR, subgroup 7	2e-12
cd05366	257	cd05366, meso-BDH-like_SDR_c, meso-2,3-butanediol	2e-12
PRK06181	263	PRK06181, PRK06181, short chain dehydrogenase; Pro	3e-12
PRK07063	260	PRK07063, PRK07063, short chain dehydrogenase; Pro	5e-12
TIGR01963	255	TIGR01963, PHB_DH, 3-hydroxybutyrate dehydrogenase	6e-12
PRK12429	258	PRK12429, PRK12429, 3-hydroxybutyrate dehydrogenas	8e-12
PRK06123	248	PRK06123, PRK06123, short chain dehydrogenase; Pro	8e-12
TIGR04316	250	TIGR04316, dhbA_paeA, 2,3-dihydro-2,3-dihydroxyben	9e-12
PRK07060	245	PRK07060, PRK07060, short chain dehydrogenase; Pro	1e-11
cd05345	248	cd05345, BKR_3_SDR_c, putative beta-ketoacyl acyl	1e-11
cd08940	258	cd08940, HBDH_SDR_c, d-3-hydroxybutyrate dehydroge	1e-11
cd05356	239	cd05356, 17beta-HSD1_like_SDR_c, 17-beta-hydroxyst	1e-11
cd09805	281	cd09805, type2_17beta_HSD-like_SDR_c, human 17beta	2e-11
PRK06482	276	PRK06482, PRK06482, short chain dehydrogenase; Pro	2e-11
PRK06138	252	PRK06138, PRK06138, short chain dehydrogenase; Pro	3e-11
cd08939	239	cd08939, KDSR-like_SDR_c, 3-ketodihydrosphingosine	3e-11
PRK07454	241	PRK07454, PRK07454, short chain dehydrogenase; Pro	3e-11
cd05337	255	cd05337, BKR_1_SDR_c, putative beta-ketoacyl acyl	3e-11
PRK07666	239	PRK07666, fabG, 3-ketoacyl-(acyl-carrier-protein)	4e-11
cd05343	250	cd05343, Mgc4172-like_SDR_c, human Mgc4172-like, c	4e-11
cd08934	243	cd08934, CAD_SDR_c, clavulanic acid dehydrogenase	4e-11
PRK07792	306	PRK07792, fabG, 3-ketoacyl-(acyl-carrier-protein)	5e-11
TIGR01829	242	TIGR01829, AcAcCoA_reduct, acetoacetyl-CoA reducta	6e-11
PRK07832	272	PRK07832, PRK07832, short chain dehydrogenase; Pro	7e-11
cd08935	271	cd08935, mannonate_red_SDR_c, putative D-mannonate	7e-11
cd05330	257	cd05330, cyclohexanol_reductase_SDR_c, cyclohexano	8e-11
cd08945	258	cd08945, PKR_SDR_c, Polyketide ketoreductase, clas	9e-11
cd08929	226	cd08929, SDR_c4, classical (c) SDR, subgroup 4	1e-10
PRK06550	235	PRK06550, fabG, 3-ketoacyl-(acyl-carrier-protein)	1e-10
PRK05693	274	PRK05693, PRK05693, short chain dehydrogenase; Pro	1e-10
PRK07326	237	PRK07326, PRK07326, short chain dehydrogenase; Pro	1e-10
cd05331	244	cd05331, DH-DHB-DH_SDR_c, 2,3 dihydro-2,3 dihydroz	1e-10
PRK06484	520	PRK06484, PRK06484, short chain dehydrogenase; Val	2e-10
cd05352	252	cd05352, MDH-like_SDR_c, mannitol dehydrogenase (M	2e-10
PRK07109	334	PRK07109, PRK07109, short chain dehydrogenase; Pro	2e-10
cd05347	248	cd05347, Ga5DH-like_SDR_c, gluconate 5-dehydrogena	2e-10
PRK07774	250	PRK07774, PRK07774, short chain dehydrogenase; Pro	2e-10
cd09806	258	cd09806, type1_17beta-HSD-like_SDR_c, human estrog	3e-10
PRK08263	275	PRK08263, PRK08263, short chain dehydrogenase; Pro	3e-10
cd05355	270	cd05355, SDR_c1, classical (c) SDR, subgroup 1	4e-10
PRK06124	256	PRK06124, PRK06124, gluconate 5-dehydrogenase; Pro	4e-10
PRK08219	227	PRK08219, PRK08219, short chain dehydrogenase; Pro	5e-10
cd05328	250	cd05328, 3alpha_HSD_SDR_c, alpha hydroxysteroid de	5e-10
PRK07067	257	PRK07067, PRK07067, sorbitol dehydrogenase; Provis	5e-10
cd05338	246	cd05338, DHRS1_HSDL2-like_SDR_c, human dehydrogena	6e-10
PRK07069	251	PRK07069, PRK07069, short chain dehydrogenase; Val	6e-10
PRK07035	252	PRK07035, PRK07035, short chain dehydrogenase; Pro	7e-10
PRK08220	252	PRK08220, PRK08220, 2,3-dihydroxybenzoate-2,3-dehy	8e-10
cd08928	248	cd08928, KR_fFAS_like_SDR_c_like, ketoacyl reducta	9e-10
cd08944	246	cd08944, SDR_c12, classical (c) SDR, subgroup 12	9e-10
PRK09072	263	PRK09072, PRK09072, short chain dehydrogenase; Pro	9e-10
PRK06077	252	PRK06077, fabG, 3-ketoacyl-(acyl-carrier-protein)	1e-09
PRK08226	263	PRK08226, PRK08226, short chain dehydrogenase; Pro	1e-09
cd05351	244	cd05351, XR_like_SDR_c, xylulose reductase-like, c	1e-09
PRK09186	256	PRK09186, PRK09186, flagellin modification protein	1e-09
PRK06841	255	PRK06841, PRK06841, short chain dehydrogenase; Pro	1e-09
cd08933	261	cd08933, RDH_SDR_c, retinal dehydrogenase-like, cl	2e-09
PRK06125	259	PRK06125, PRK06125, short chain dehydrogenase; Pro	2e-09
cd05329	251	cd05329, TR_SDR_c, tropinone reductase-I and II (T	3e-09
PRK06113	255	PRK06113, PRK06113, 7-alpha-hydroxysteroid dehydro	3e-09
PRK08261	450	PRK08261, fabG, 3-ketoacyl-(acyl-carrier-protein)	4e-09
PRK12935	247	PRK12935, PRK12935, acetoacetyl-CoA reductase; Pro	4e-09
PRK12746	254	PRK12746, PRK12746, short chain dehydrogenase; Pro	7e-09
PRK12384	259	PRK12384, PRK12384, sorbitol-6-phosphate dehydroge	7e-09
cd08942	250	cd08942, RhlG_SDR_c, RhlG and related beta-ketoacy	1e-08
TIGR01832	248	TIGR01832, kduD, 2-deoxy-D-gluconate 3-dehydrogena	1e-08
cd05365	242	cd05365, 7_alpha_HSDH_SDR_c, 7 alpha-hydroxysteroi	1e-08
PRK07814	263	PRK07814, PRK07814, short chain dehydrogenase; Pro	1e-08
PRK08277	278	PRK08277, PRK08277, D-mannonate oxidoreductase; Pr	1e-08
PRK06180	277	PRK06180, PRK06180, short chain dehydrogenase; Pro	1e-08
TIGR01500	256	TIGR01500, sepiapter_red, sepiapterin reductase	1e-08
PRK07024	257	PRK07024, PRK07024, short chain dehydrogenase; Pro	2e-08
PRK08267	260	PRK08267, PRK08267, short chain dehydrogenase; Pro	2e-08
PRK06057	255	PRK06057, PRK06057, short chain dehydrogenase; Pro	2e-08
PRK06172	253	PRK06172, PRK06172, short chain dehydrogenase; Pro	2e-08
PRK06198	260	PRK06198, PRK06198, short chain dehydrogenase; Pro	3e-08
cd05368	241	cd05368, DHRS6_like_SDR_c, human DHRS6-like, class	3e-08
TIGR02415	254	TIGR02415, 23BDH, acetoin reductases	4e-08
cd09761	242	cd09761, A3DFK9-like_SDR_c, Clostridium thermocell	4e-08
PRK08936	261	PRK08936, PRK08936, glucose-1-dehydrogenase; Provi	4e-08
PRK07775	274	PRK07775, PRK07775, short chain dehydrogenase; Pro	4e-08
PRK05650	270	PRK05650, PRK05650, short chain dehydrogenase; Pro	5e-08
cd05340	236	cd05340, Ycik_SDR_c, Escherichia coli K-12 YCIK-li	5e-08
PRK08945	247	PRK08945, PRK08945, putative oxoacyl-(acyl carrier	6e-08
PRK06484	520	PRK06484, PRK06484, short chain dehydrogenase; Val	8e-08
PRK06194	287	PRK06194, PRK06194, hypothetical protein; Provisio	8e-08
cd05371	252	cd05371, HSD10-like_SDR_c, 17hydroxysteroid dehydr	1e-07
PRK12747	252	PRK12747, PRK12747, short chain dehydrogenase; Pro	1e-07
PRK12748	256	PRK12748, PRK12748, 3-ketoacyl-(acyl-carrier-prote	3e-07
PRK07074	257	PRK07074, PRK07074, short chain dehydrogenase; Pro	4e-07
PRK07062	265	PRK07062, PRK07062, short chain dehydrogenase; Pro	4e-07
PRK06935	258	PRK06935, PRK06935, 2-deoxy-D-gluconate 3-dehydrog	4e-07
PRK06463	255	PRK06463, fabG, 3-ketoacyl-(acyl-carrier-protein)	5e-07
PRK08213	259	PRK08213, PRK08213, gluconate 5-dehydrogenase; Pro	6e-07
PRK07806	248	PRK07806, PRK07806, short chain dehydrogenase; Pro	6e-07
PRK07890	258	PRK07890, PRK07890, short chain dehydrogenase; Pro	7e-07
PRK09242	257	PRK09242, PRK09242, tropinone reductase; Provision	7e-07
PRK07478	254	PRK07478, PRK07478, short chain dehydrogenase; Pro	7e-07
PRK06500	249	PRK06500, PRK06500, short chain dehydrogenase; Pro	7e-07
cd05353	250	cd05353, hydroxyacyl-CoA-like_DH_SDR_c-like, (3R)-	9e-07
PRK12938	246	PRK12938, PRK12938, acetyacetyl-CoA reductase; Pro	9e-07
PRK12742	237	PRK12742, PRK12742, oxidoreductase; Provisional	1e-06
PRK07023	243	PRK07023, PRK07023, short chain dehydrogenase; Pro	1e-06
PRK05867	253	PRK05867, PRK05867, short chain dehydrogenase; Pro	1e-06
PRK12481	251	PRK12481, PRK12481, 2-deoxy-D-gluconate 3-dehydrog	2e-06
PRK06940	275	PRK06940, PRK06940, short chain dehydrogenase; Pro	2e-06
TIGR03206	250	TIGR03206, benzo_BadH, 2-hydroxycyclohexanecarboxy	2e-06
PRK07791	286	PRK07791, PRK07791, short chain dehydrogenase; Pro	2e-06
cd08931	227	cd08931, SDR_c9, classical (c) SDR, subgroup 9	2e-06
cd08937	256	cd08937, DHB_DH-like_SDR_c, 1,6-dihydroxycyclohexa	2e-06
TIGR03971	265	TIGR03971, SDR_subfam_1, oxidoreductase, SDR famil	3e-06
PRK06523	260	PRK06523, PRK06523, short chain dehydrogenase; Pro	3e-06
PRK12936	245	PRK12936, PRK12936, 3-ketoacyl-(acyl-carrier-prote	3e-06
PRK06924	251	PRK06924, PRK06924, short chain dehydrogenase; Pro	4e-06
PRK07523	255	PRK07523, PRK07523, gluconate 5-dehydrogenase; Pro	4e-06
PRK12745	256	PRK12745, PRK12745, 3-ketoacyl-(acyl-carrier-prote	6e-06
PRK06171	266	PRK06171, PRK06171, sorbitol-6-phosphate 2-dehydro	6e-06
PRK06398	258	PRK06398, PRK06398, aldose dehydrogenase; Validate	1e-05
cd05357	234	cd05357, PR_SDR_c, pteridine reductase (PR), class	2e-05
PRK13394	262	PRK13394, PRK13394, 3-hydroxybutyrate dehydrogenas	2e-05
pfam08659	181	pfam08659, KR, KR domain	2e-05
PRK08643	256	PRK08643, PRK08643, acetoin reductase; Validated	2e-05
cd05369	249	cd05369, TER_DECR_SDR_a, Trans-2-enoyl-CoA reducta	3e-05
PRK07831	262	PRK07831, PRK07831, short chain dehydrogenase; Pro	3e-05
PRK08217	253	PRK08217, fabG, 3-ketoacyl-(acyl-carrier-protein)	4e-05
cd05363	254	cd05363, SDH_SDR_c, Sorbitol dehydrogenase (SDH),	4e-05
PRK06701	290	PRK06701, PRK06701, short chain dehydrogenase; Pro	4e-05
PRK06139	330	PRK06139, PRK06139, short chain dehydrogenase; Pro	4e-05
PRK08251	248	PRK08251, PRK08251, short chain dehydrogenase; Pro	5e-05
PRK07577	234	PRK07577, PRK07577, short chain dehydrogenase; Pro	6e-05
PRK08063	250	PRK08063, PRK08063, enoyl-(acyl carrier protein) r	7e-05
PRK10538	248	PRK10538, PRK10538, malonic semialdehyde reductase	9e-05
PRK08993	253	PRK08993, PRK08993, 2-deoxy-D-gluconate 3-dehydrog	9e-05
PRK08278	273	PRK08278, PRK08278, short chain dehydrogenase; Pro	1e-04
PRK08265	261	PRK08265, PRK08265, short chain dehydrogenase; Pro	1e-04
cd05322	257	cd05322, SDH_SDR_c_like, Sorbitol 6-phosphate dehy	1e-04
COG0451	314	COG0451, WcaG, Nucleoside-diphosphate-sugar epimer	3e-04
PRK12823	260	PRK12823, benD, 1,6-dihydroxycyclohexa-2,4-diene-1	3e-04
cd05349	246	cd05349, BKR_2_SDR_c, putative beta-ketoacyl acyl	4e-04
cd02266	186	cd02266, SDR, Short-chain dehydrogenases/reductase	4e-04
PRK05872	296	PRK05872, PRK05872, short chain dehydrogenase; Pro	4e-04
pfam13460	182	pfam13460, NAD_binding_10, NADH(P)-binding	4e-04
cd08953	436	cd08953, KR_2_SDR_x, ketoreductase (KR), subgroup	5e-04
cd11730	206	cd11730, Tthb094_like_SDR_c, Tthb094 and related p	5e-04
smart00822	180	smart00822, PKS_KR, This enzymatic domain is part	7e-04
PLN02780	320	PLN02780, PLN02780, ketoreductase/ oxidoreductase	0.001
PRK07097	265	PRK07097, PRK07097, gluconate 5-dehydrogenase; Pro	0.001
cd05269	272	cd05269, TMR_SDR_a, triphenylmethane reductase (TM	0.002
cd09763	265	cd09763, DHRS1-like_SDR_c, human dehydrogenase/red	0.002
PLN02657	390	PLN02657, PLN02657, 3,8-divinyl protochlorophyllid	0.002
PRK07856	252	PRK07856, PRK07856, short chain dehydrogenase; Pro	0.002
PRK07677	252	PRK07677, PRK07677, short chain dehydrogenase; Pro	0.002
PRK06200	263	PRK06200, PRK06200, 2,3-dihydroxy-2,3-dihydropheny	0.002
PRK08085	254	PRK08085, PRK08085, gluconate 5-dehydrogenase; Pro	0.002
PRK12859	256	PRK12859, PRK12859, 3-ketoacyl-(acyl-carrier-prote	0.003
COG0702	275	COG0702, COG0702, Predicted nucleoside-diphosphate	0.003
cd05274	375	cd05274, KR_FAS_SDR_x, ketoreductase (KR) and fatt	0.004
cd05228	318	cd05228, AR_FR_like_1_SDR_e, uncharacterized subgr	0.004

>gnl|CDD|212492 cd05327, retinol-DH_like_SDR_c_like, retinol dehydrogenase (retinol-DH), Light dependent Protochlorophyllide (Pchlide) OxidoReductase (LPOR) and related proteins, classical (c) SDRs

 Score =  266 bits (683), Expect = 4e-90
 Identities = 109/220 (49%), Positives = 142/220 (64%), Gaps = 8/220 (3%)

Query: 3   IVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSS 62
           +VITGA SGIG ETAR LA RG HV++  R+   G++    I KE  +AKV+ ++LDLSS
Sbjct: 4   VVITGANSGIGKETARELAKRGAHVIIACRNEEKGEEAAAEIKKETGNAKVEVIQLDLSS 63

Query: 63  LASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDT 122
           LASVR FA E+  +  +L+ILINNAGIM  P  L+KD  ELQFA N+LGHFLLTNLLL  
Sbjct: 64  LASVRQFAEEFLARFPRLDILINNAGIMAPPRRLTKDGFELQFAVNYLGHFLLTNLLLPV 123

Query: 123 MKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANILHANE 182
           +K +A       RI+NVSS  HR           + +   Y+ ++AY QSKLANIL   E
Sbjct: 124 LKASA-----PSRIVNVSSIAHRAG-PIDFNDLDLENNKEYSPYKAYGQSKLANILFTRE 177

Query: 183 LARRLKEDGVDITANSVHPGAIATNIIRHNSLFRSMNTIL 222
           LARRL+  G  +T N++HPG + T ++R N  F  +  +L
Sbjct: 178 LARRLEGTG--VTVNALHPGVVRTELLRRNGSFFLLYKLL 215

Classical SDR subgroup containing retinol-DHs, LPORs, and related proteins. Retinol is processed by a medium chain alcohol dehydrogenase followed by retinol-DHs. Pchlide reductases act in chlorophyll biosynthesis. There are distinct enzymes that catalyze Pchlide reduction in light or dark conditions. Light-dependent reduction is via an NADP-dependent SDR, LPOR. Proteins in this subfamily share the glycine-rich NAD-binding motif of the classical SDRs, have a partial match to the canonical active site tetrad, but lack the typical active site Ser. This subgroup includes the human proteins: retinol dehydrogenase -12, -13 ,and -14, dehydrogenase/reductase SDR family member (DHRS)-12 , -13 and -X (a DHRS on chromosome X), and WWOX (WW domain-containing oxidoreductase), as well as a Neurospora crassa SDR encoded by the blue light inducible bli-4 gene. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 269

>gnl|CDD|235737 PRK06197, PRK06197, short chain dehydrogenase; Provisional

 Score =  230 bits (588), Expect = 3e-75
 Identities = 95/209 (45%), Positives = 119/209 (56%), Gaps = 9/209 (4%)

Query: 4   VITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSL 63
           V+TGA +G+G ETA  LA +G HVV+ VR++  GK     I    P A V   ELDL+SL
Sbjct: 20  VVTGANTGLGYETAAALAAKGAHVVLAVRNLDKGKAAAARITAATPGADVTLQELDLTSL 79

Query: 64  ASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTM 123
           ASVR  A      + ++++LINNAG+M TP   + D  ELQF TNHLGHF LT LLLD +
Sbjct: 80  ASVRAAADALRAAYPRIDLLINNAGVMYTPKQTTADGFELQFGTNHLGHFALTGLLLDRL 139

Query: 124 KKTARKSGGEG-RIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANILHANE 182
                     G R++ VSS GHR+     I FD +     YN   AY QSKLAN+L   E
Sbjct: 140 LPV------PGSRVVTVSSGGHRI--RAAIHFDDLQWERRYNRVAAYGQSKLANLLFTYE 191

Query: 183 LARRLKEDGVDITANSVHPGAIATNIIRH 211
           L RRL   G    A + HPG   T + R+
Sbjct: 192 LQRRLAAAGATTIAVAAHPGVSNTELARN 220

Length = 306

>gnl|CDD|212495 cd09807, retinol-DH_like_SDR_c, retinol dehydrogenases (retinol-DHs), classical (c) SDRs

 Score =  222 bits (567), Expect = 2e-72
 Identities = 102/225 (45%), Positives = 140/225 (62%), Gaps = 12/225 (5%)

Query: 3   IVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSS 62
           ++ITGA +GIG ETAR LA RG  V+M  RD+A  ++    I ++  + +V    LDL+S
Sbjct: 4   VIITGANTGIGKETARELARRGARVIMACRDMAKCEEAAAEIRRDTLNHEVIVRHLDLAS 63

Query: 63  LASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDT 122
           L S+R FA+E+  +  +L++LINNAG+M  P+  ++D  E+QF  NHLGHFLLTNLLLD 
Sbjct: 64  LKSIRAFAAEFLAEEDRLDVLINNAGVMRCPYSKTEDGFEMQFGVNHLGHFLLTNLLLDL 123

Query: 123 MKKTARKSGGEGRIINVSSEGHRLAYHEG-IRFDKINDPSGYNGFRAYSQSKLANILHAN 181
           +KK+A       RI+NVSS    LA+  G I FD +N    YN   AY QSKLAN+L   
Sbjct: 124 LKKSA-----PSRIVNVSS----LAHKAGKINFDDLNSEKSYNTGFAYCQSKLANVLFTR 174

Query: 182 ELARRLKEDGVDITANSVHPGAIATNIIRHNSLFRSMNTILHALP 226
           ELARRL+  G  +T N++HPG + T + RH  +     + L    
Sbjct: 175 ELARRLQ--GTGVTVNALHPGVVRTELGRHTGIHHLFLSTLLNPL 217

Classical SDR-like subgroup containing retinol-DHs and related proteins. Retinol is processed by a medium chain alcohol dehydrogenase followed by retinol-DHs. Proteins in this subfamily share the glycine-rich NAD-binding motif of the classical SDRs, have a partial match to the canonical active site tetrad, but lack the typical active site Ser. This subgroup includes the human proteins: retinol dehydrogenase -12, -13 ,and -14. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 274

>gnl|CDD|235736 PRK06196, PRK06196, oxidoreductase; Provisional

 Score =  202 bits (516), Expect = 3e-64
 Identities = 86/208 (41%), Positives = 113/208 (54%), Gaps = 16/208 (7%)

Query: 4   VITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSL 63
           ++TG  SG+G ET R LA  G HV++  R     ++     +  I   +V    LDL+ L
Sbjct: 30  IVTGGYSGLGLETTRALAQAGAHVIVPARRPDVAREA----LAGIDGVEVV--MLDLADL 83

Query: 64  ASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTM 123
            SVR FA  +     +++ILINNAG+M  P     D  E QFATNHLGHF L NLL    
Sbjct: 84  ESVRAFAERFLDSGRRIDILINNAGVMACPETRVGDGWEAQFATNHLGHFALVNLLWP-- 141

Query: 124 KKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANILHANEL 183
              A  +G   R++ +SS GHR +    IR+D  +   GY+ + AY QSK AN L A  L
Sbjct: 142 ---ALAAGAGARVVALSSAGHRRS---PIRWDDPHFTRGYDKWLAYGQSKTANALFAVHL 195

Query: 184 ARRLKEDGVDITANSVHPGAIATNIIRH 211
            +  K+ GV   A SVHPG I T + RH
Sbjct: 196 DKLGKDQGV--RAFSVHPGGILTPLQRH 221

Length = 315

>gnl|CDD|187669 cd09809, human_WWOX_like_SDR_c-like, human WWOX (WW domain-containing oxidoreductase)-like, classical (c)-like SDRs

 Score =  176 bits (447), Expect = 2e-54
 Identities = 90/233 (38%), Positives = 133/233 (57%), Gaps = 29/233 (12%)

Query: 3   IVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSS 62
           I+ITGA SGIG ETAR  AL G HV++  R+++        I++E   A+V+AM LDL+S
Sbjct: 4   IIITGANSGIGFETARSFALHGAHVILACRNMSRASAAVSRILEEWHKARVEAMTLDLAS 63

Query: 63  LASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDT 122
           L SV+ FA  +  ++  L++L+ NA +   P+ L++D +E  F  NHLGHF L  LL D 
Sbjct: 64  LRSVQRFAEAFKAKNSPLHVLVCNAAVFALPWTLTEDGLETTFQVNHLGHFYLVQLLEDV 123

Query: 123 MKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSG-------------YNGFRAY 169
           ++++A       R+I VSSE H        RF  + D  G             Y    AY
Sbjct: 124 LRRSAP-----ARVIVVSSESH--------RFTDLPDSCGNLDFSLLSPPKKKYWSMLAY 170

Query: 170 SQSKLANILHANELARRLKEDGVDITANSVHPGA-IATNIIRHNSLFRSMNTI 221
           +++KL NIL +NEL RRL   G  IT+NS+HPG  + ++I R+  ++  + T+
Sbjct: 171 NRAKLCNILFSNELHRRLSPRG--ITSNSLHPGNMMYSSIHRNWWVYTLLFTL 221

Classical-like SDR domain of human WWOX and related proteins. Proteins in this subfamily share the glycine-rich NAD-binding motif of the classical SDRs, have a partial match to the canonical active site tetrad, but lack the typical active site Ser. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 284

>gnl|CDD|235627 PRK05854, PRK05854, short chain dehydrogenase; Provisional

 Score =  161 bits (409), Expect = 3e-48
 Identities = 86/206 (41%), Positives = 112/206 (54%), Gaps = 10/206 (4%)

Query: 4   VITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSL 63
           V+TGA+ G+G   AR LA  G  V++ VR+ A G+     I   +P AK+    LDLSSL
Sbjct: 18  VVTGASDGLGLGLARRLAAAGAEVILPVRNRAKGEAAVAAIRTAVPDAKLSLRALDLSSL 77

Query: 64  ASVRNFASEYNIQHHQLNILINNAGIMGTP-FMLSKDNIELQFATNHLGHFLLTNLLLDT 122
           ASV     +   +   +++LINNAG+M  P    + D  ELQF TNHLGHF LT  LL  
Sbjct: 78  ASVAALGEQLRAEGRPIHLLINNAGVMTPPERQTTADGFELQFGTNHLGHFALTAHLLPL 137

Query: 123 MKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANILHANE 182
           ++       G  R+ + SS     A    I +D +N    Y G RAYSQSK+A  L A E
Sbjct: 138 LR------AGRARVTSQSSIA---ARRGAINWDDLNWERSYAGMRAYSQSKIAVGLFALE 188

Query: 183 LARRLKEDGVDITANSVHPGAIATNI 208
           L RR +  G  IT+N  HPG   TN+
Sbjct: 189 LDRRSRAAGWGITSNLAHPGVAPTNL 214

Length = 313

>gnl|CDD|187670 cd09810, LPOR_like_SDR_c_like, light-dependent protochlorophyllide reductase (LPOR)-like, classical (c)-like SDRs

 Score =  150 bits (380), Expect = 5e-44
 Identities = 87/262 (33%), Positives = 118/262 (45%), Gaps = 37/262 (14%)

Query: 3   IVITGATSGIGTETARVLALRGV-HVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLS 61
           +VITGA+SG+G   A+ LA RG  HVVM  RD    +   + +   +P      +  DL+
Sbjct: 4   VVITGASSGLGLAAAKALARRGEWHVVMACRDFLKAEQAAQEVG--MPKDSYSVLHCDLA 61

Query: 62  SLASVRNFASEYNIQHHQLNILINNAGI---MGTPFMLSKDNIELQFATNHLGHFLLTNL 118
           SL SVR F   +      L+ L+ NA +          + D  EL    NHLGHFLLTNL
Sbjct: 62  SLDSVRQFVDNFRRTGRPLDALVCNAAVYLPTAKEPRFTADGFELTVGVNHLGHFLLTNL 121

Query: 119 LLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGI------------------RFDKINDP 160
           LL+ ++   R      RI+ V S  H      G                    F+ + D 
Sbjct: 122 LLEDLQ---RSENASPRIVIVGSITHNPNTLAGNVPPRATLGDLEGLAGGLKGFNSMIDG 178

Query: 161 SGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIA-TNIIR-HNSLFRSM 218
             + G +AY  SK+ N+L   EL RRL E    IT NS++PG IA T + R H  LFR++
Sbjct: 179 GEFEGAKAYKDSKVCNMLTTYELHRRLHE-ETGITFNSLYPGCIAETGLFREHYPLFRTL 237

Query: 219 NTILHALP-------GIAGKCL 233
                            AG+ L
Sbjct: 238 FPPFQKYITKGYVSEEEAGERL 259

Classical SDR-like subgroup containing LPOR and related proteins. Protochlorophyllide (Pchlide) reductases act in chlorophyll biosynthesis. There are distinct enzymes that catalyze Pchlide reduction in light or dark conditions. Light-dependent reduction is via an NADP-dependent SDR, LPOR. Proteins in this subfamily share the glycine-rich NAD-binding motif of the classical SDRs, have a partial match to the canonical active site tetrad, but lack the typical active site Ser. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 311

>gnl|CDD|180983 PRK07453, PRK07453, protochlorophyllide oxidoreductase; Validated

 Score =  131 bits (331), Expect = 1e-36
 Identities = 83/243 (34%), Positives = 119/243 (48%), Gaps = 39/243 (16%)

Query: 3   IVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKE--IPSAKVDAMELDL 60
           ++ITGA+SG+G   A+ LA RG HV+M  R++       E   +E  IP      + +DL
Sbjct: 9   VIITGASSGVGLYAAKALAKRGWHVIMACRNLKKA----EAAAQELGIPPDSYTIIHIDL 64

Query: 61  SSLASVRNFASEYNIQHHQLNILINNAGI----MGTPFMLSKDNIELQFATNHLGHFLLT 116
             L SVR F  ++      L+ L+ NA +    +  P + S    EL  ATNHLGHFLL 
Sbjct: 65  GDLDSVRRFVDDFRALGKPLDALVCNAAVYMPLLKEP-LRSPQGYELSMATNHLGHFLLC 123

Query: 117 NLLLDTMKKTARKSGGEGRII---NVSSEGHRLAYHEGI--RFDKINDPSGY-NGFR--- 167
           NLLL+ +KK+      + R++    V++    L     I    D + D SG+  GF+   
Sbjct: 124 NLLLEDLKKSPAP---DPRLVILGTVTANPKELGGKIPIPAPAD-LGDLSGFEAGFKAPI 179

Query: 168 ------------AYSQSKLANILHANELARRLKEDGVDITANSVHPGAIA-TNIIR-HNS 213
                       AY  SKL N+L   EL RR  E    IT +S++PG +A T + R    
Sbjct: 180 SMADGKKFKPGKAYKDSKLCNMLTMRELHRRYHES-TGITFSSLYPGCVADTPLFRNTPP 238

Query: 214 LFR 216
           LF+
Sbjct: 239 LFQ 241

Length = 322

>gnl|CDD|212491 cd05233, SDR_c, classical (c) SDRs

 Score =  125 bits (317), Expect = 2e-35
 Identities = 65/226 (28%), Positives = 94/226 (41%), Gaps = 27/226 (11%)

Query: 3   IVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSS 62
            ++TGA+SGIG   AR LA  G  VV+  R+    + + E    E       A++ D+S 
Sbjct: 1   ALVTGASSGIGRAIARRLAREGAKVVLADRN---EEALAELAAIEALGGNAVAVQADVSD 57

Query: 63  LASVRNFASEYNIQHHQLNILINNAGIMGTPFM--LSKDNIELQFATNHLGHFLLTNLLL 120
              V     E   +  +L+IL+NNAGI     +  L+ ++ +     N  G FLLT   L
Sbjct: 58  EEDVEALVEEALEEFGRLDILVNNAGIARPGPLEELTDEDWDRVLDVNLTGVFLLTRAAL 117

Query: 121 DTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANILHA 180
             MKK      G GRI+N+SS                          AY+ SK A     
Sbjct: 118 PHMKK-----QGGGRIVNISSVAGLRPLPGQA---------------AYAASKAALEGLT 157

Query: 181 NELARRLKEDGVDITANSVHPGAIATNIIRHNSLFRSMNTILHALP 226
             LA  L   G  I  N+V PG + T ++       +   +  A+P
Sbjct: 158 RSLALELAPYG--IRVNAVAPGLVDTPMLAKLGPEEAEKELAAAIP 201

SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 234

>gnl|CDD|177654 PLN00015, PLN00015, protochlorophyllide reductase

 Score =  126 bits (319), Expect = 6e-35
 Identities = 86/240 (35%), Positives = 118/240 (49%), Gaps = 34/240 (14%)

Query: 4   VITGATSGIGTETARVLALRGV-HVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSS 62
           +ITGA+SG+G  TA+ LA  G  HVVM  RD    +   ++    +P      M LDL+S
Sbjct: 1   IITGASSGLGLATAKALAETGKWHVVMACRDFLKAERAAKSA--GMPKDSYTVMHLDLAS 58

Query: 63  LASVRNFASEYNIQHHQLNILINNAGIM----GTPFMLSKDNIELQFATNHLGHFLLTNL 118
           L SVR F   +      L++L+ NA +       P   + D  EL   TNHLGHFLL+ L
Sbjct: 59  LDSVRQFVDNFRRSGRPLDVLVCNAAVYLPTAKEP-TFTADGFELSVGTNHLGHFLLSRL 117

Query: 119 LLDTMKKTARKSGGEGRIINVSS--------EGH-----RLAYHEGIR--FDKIN----- 158
           LLD +KK+   S    R+I V S         G+      L    G+    + +N     
Sbjct: 118 LLDDLKKSDYPS---KRLIIVGSITGNTNTLAGNVPPKANLGDLRGLAGGLNGLNSSAMI 174

Query: 159 DPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIA-TNIIR-HNSLFR 216
           D   ++G +AY  SK+ N+L   E  RR  E+   IT  S++PG IA T + R H  LFR
Sbjct: 175 DGGEFDGAKAYKDSKVCNMLTMQEFHRRYHEE-TGITFASLYPGCIATTGLFREHIPLFR 233

Length = 308

>gnl|CDD|200089 TIGR01289, LPOR, light-dependent protochlorophyllide reductase

 Score =  124 bits (313), Expect = 4e-34
 Identities = 85/244 (34%), Positives = 118/244 (48%), Gaps = 38/244 (15%)

Query: 3   IVITGATSGIGTETARVLALRGV-HVVMGVRDIAAGKDVKETIVKEI--PSAKVDAMELD 59
           ++ITGA+SG+G   A+ LA  G  HV+M  RD        E   K +  P      M LD
Sbjct: 6   VIITGASSGLGLYAAKALAATGEWHVIMACRDF----LKAEQAAKSLGMPKDSYTIMHLD 61

Query: 60  LSSLASVRNFASEYNIQHHQLNILINNAGI----MGTPFMLSKDNIELQFATNHLGHFLL 115
           L SL SVR F  ++      L+ L+ NA +       P   + D  EL   TNHLGHFLL
Sbjct: 62  LGSLDSVRQFVQQFRESGRPLDALVCNAAVYFPTAKEP-RFTADGFELSVGTNHLGHFLL 120

Query: 116 TNLLLDTMKKTARKSGGEGRII---NVSSEGHRLAYHEGIRFDKINDPSG---------- 162
            NLLLD +K +  K     R+I   +++   + LA +   + + + D SG          
Sbjct: 121 CNLLLDDLKNSPNKD---KRLIIVGSITGNTNTLAGNVPPKAN-LGDLSGLAAGFKAPIA 176

Query: 163 ------YNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIA-TNIIR-HNSL 214
                 + G +AY  SK+ N+L   EL RR   D   IT  S++PG IA T + R H  L
Sbjct: 177 MIDGKEFKGAKAYKDSKVCNMLTVRELHRRF-HDETGITFASLYPGCIADTGLFREHVPL 235

Query: 215 FRSM 218
           FR++
Sbjct: 236 FRTL 239

This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form [Biosynthesis of cofactors, prosthetic groups, and carriers, Chlorophyll and bacteriochlorphyll]. Length = 314

>gnl|CDD|223959 COG1028, FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only]

 Score =  116 bits (292), Expect = 1e-31
 Identities = 67/214 (31%), Positives = 93/214 (43%), Gaps = 30/214 (14%)

Query: 3   IVITGATSGIGTETARVLALRGVHVVMGV-RDIAAGKDVKETIVKEIPSAKVDAMELDLS 61
            ++TGA+SGIG   AR LA  G  VV+   R      +     +KE    +  A+  D+S
Sbjct: 8   ALVTGASSGIGRAIARALAREGARVVVAARRSEEEAAEALAAAIKEAGGGRAAAVAADVS 67

Query: 62  S-LASVRNFASEYNIQHHQLNILINNAGIMG--TPFM-LSKDNIELQFATNHLGHFLLTN 117
               SV    +    +  +++IL+NNAGI G   P   L++++ +     N LG FLLT 
Sbjct: 68  DDEESVEALVAAAEEEFGRIDILVNNAGIAGPDAPLEELTEEDWDRVIDVNLLGAFLLTR 127

Query: 118 LLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANI 177
             L  MKK         RI+N+SS               +    G  G  AY+ SK A I
Sbjct: 128 AALPLMKK--------QRIVNISS---------------VAGLGGPPGQAAYAASKAALI 164

Query: 178 LHANELARRLKEDGVDITANSVHPGAIATNIIRH 211
                LA  L   G  I  N+V PG I T +   
Sbjct: 165 GLTKALALELAPRG--IRVNAVAPGYIDTPMTAA 196

Length = 251

>gnl|CDD|187585 cd05324, carb_red_PTCR-like_SDR_c, Porcine testicular carbonyl reductase (PTCR)-like, classical (c) SDRs

 Score =  109 bits (274), Expect = 4e-29
 Identities = 63/208 (30%), Positives = 89/208 (42%), Gaps = 34/208 (16%)

Query: 4   VITGATSGIGTETARVLALRG-VHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSS 62
           ++TGA  GIG E  R LA  G   V++  RD+  G+   E +  E     V   +LD++ 
Sbjct: 4   LVTGANRGIGFEIVRQLAKSGPGTVILTARDVERGQAAVEKLRAE--GLSVRFHQLDVTD 61

Query: 63  LASVRNFASEYNIQHHQLNILINNAGIMG---TPFMLSKDNIELQFATNHLGHFLLTNLL 119
            AS+   A     ++  L+IL+NNAGI          +++       TN  G   +T  L
Sbjct: 62  DASIEAAADFVEEKYGGLDILVNNAGIAFKGFDDSTPTREQARETMKTNFFGTVDVTQAL 121

Query: 120 LDTMKKTARKSGGEGRIINVSS-EGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANIL 178
           L  +KK+       GRI+NVSS  G   +                    AY  SK A   
Sbjct: 122 LPLLKKSP-----AGRIVNVSSGLGSLTS--------------------AYGVSKAALNA 156

Query: 179 HANELARRLKEDGVDITANSVHPGAIAT 206
               LA+ LKE G  I  N+  PG + T
Sbjct: 157 LTRILAKELKETG--IKVNACCPGWVKT 182

PTCR is a classical SDR which catalyzes the NADPH-dependent reduction of ketones on steroids and prostaglandins. Unlike most SDRs, PTCR functions as a monomer. This subgroup also includes human carbonyl reductase 1 (CBR1) and CBR3. CBR1 is an NADPH-dependent SDR with broad substrate specificity and may be responsible for the in vivo reduction of quinones, prostaglandins, and other carbonyl-containing compounds. In addition it includes poppy NADPH-dependent salutaridine reductase which catalyzes the stereospecific reduction of salutaridine to 7(S)-salutaridinol in the biosynthesis of morphine, and Arabidopsis SDR1,a menthone reductase, which catalyzes the reduction of menthone to neomenthol, a compound with antimicrobial activity; SDR1 can also carry out neomenthol oxidation. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 225

>gnl|CDD|235546 PRK05653, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

 Score =  108 bits (272), Expect = 1e-28
 Identities = 57/210 (27%), Positives = 86/210 (40%), Gaps = 26/210 (12%)

Query: 3   IVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSS 62
            ++TGA+ GIG   A  LA  G  VV+   +  A + +   +       +   +  D+S 
Sbjct: 8   ALVTGASRGIGRAIALRLAADGAKVVIYDSNEEAAEALAAELRAA--GGEARVLVFDVSD 65

Query: 63  LASVRNFASEYNIQHHQLNILINNAGIMG-TPFM-LSKDNIELQFATNHLGHFLLTNLLL 120
            A+VR            L+IL+NNAGI        +S+++ +     N  G F +    L
Sbjct: 66  EAAVRALIEAAVEAFGALDILVNNAGITRDALLPRMSEEDWDRVIDVNLTGTFNVVRAAL 125

Query: 121 DTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANILHA 180
             M K        GRI+N+SS               ++  +G  G   YS +K   I   
Sbjct: 126 PPMIKA-----RYGRIVNISS---------------VSGVTGNPGQTNYSAAKAGVIGFT 165

Query: 181 NELARRLKEDGVDITANSVHPGAIATNIIR 210
             LA  L   G  IT N+V PG I T++  
Sbjct: 166 KALALELASRG--ITVNAVAPGFIDTDMTE 193

Length = 246

>gnl|CDD|187668 cd09808, DHRS-12_like_SDR_c-like, human dehydrogenase/reductase SDR family member (DHRS)-12/FLJ13639-like, classical (c)-like SDRs

 Score = 98.4 bits (245), Expect = 8e-25
 Identities = 61/208 (29%), Positives = 103/208 (49%), Gaps = 13/208 (6%)

Query: 4   VITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSL 63
           +ITGA SGIG   A  +A RG  V M  R+    ++ ++ I  E  +  +    +D+S  
Sbjct: 5   LITGANSGIGKAAALAIAKRGGTVHMVCRNQTRAEEARKEIETESGNQNIFLHIVDMSDP 64

Query: 64  ASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTM 123
             V  F  E+  +  +L++LINNAG M     L++D +E  FATN LG ++LT  L+  +
Sbjct: 65  KQVWEFVEEFKEEGKKLHVLINNAGCMVNKRELTEDGLEKNFATNTLGTYILTTHLIPVL 124

Query: 124 KKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSG-YNGFRAYSQSKLANILHANE 182
           +K       + R+I VSS G      + +  + +      ++G   Y+Q+K   ++   +
Sbjct: 125 EKEE-----DPRVITVSSGG---MLVQKLNTNNLQSERTAFDGTMVYAQNKRQQVIMTEQ 176

Query: 183 LARRLKEDGVDITANSVHPGAIATNIIR 210
            A++  E    I  + +HPG   T  +R
Sbjct: 177 WAKKHPE----IHFSVMHPGWADTPAVR 200

Classical SDR-like subgroup containing human DHRS-12/FLJ13639, the 36K protein of zebrafish CNS myelin, and related proteins. DHRS-12/FLJ13639 is expressed in neurons and oligodendrocytes in the human cerebral cortex. Proteins in this subgroup share the glycine-rich NAD-binding motif of the classical SDRs, have a partial match to the canonical active site tetrad, but lack the typical active site Ser. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 255

>gnl|CDD|183775 PRK12826, PRK12826, 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed

 Score = 97.3 bits (243), Expect = 2e-24
 Identities = 61/205 (29%), Positives = 86/205 (41%), Gaps = 25/205 (12%)

Query: 4   VITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSL 63
           ++TGA  GIG   A  LA  G  V++            E +      A+  A ++D+   
Sbjct: 10  LVTGAARGIGRAIAVRLAADGAEVIVVDICGDDAAATAELVEAAGGKAR--ARQVDVRDR 67

Query: 64  ASVRNFASEYNIQHHQLNILINNAGIMG-TPFM-LSKDNIELQFATNHLGHFLLTNLLLD 121
           A+++   +       +L+IL+ NAGI   TPF  +  +  E     N  G FLLT   L 
Sbjct: 68  AALKAAVAAGVEDFGRLDILVANAGIFPLTPFAEMDDEQWERVIDVNLTGTFLLTQAALP 127

Query: 122 TMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANILHAN 181
            + +      G GRI+  SS    +A   G R        GY G   Y+ SK   +    
Sbjct: 128 ALIR-----AGGGRIVLTSS----VA---GPRV-------GYPGLAHYAASKAGLVGFTR 168

Query: 182 ELARRLKEDGVDITANSVHPGAIAT 206
            LA  L      IT NSVHPG + T
Sbjct: 169 ALALELAARN--ITVNSVHPGGVDT 191

Length = 251

>gnl|CDD|187586 cd05325, carb_red_sniffer_like_SDR_c, carbonyl reductase sniffer-like, classical (c) SDRs

 Score = 95.1 bits (237), Expect = 1e-23
 Identities = 68/211 (32%), Positives = 98/211 (46%), Gaps = 32/211 (15%)

Query: 3   IVITGATSGIGTETARVLALRG-VHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLS 61
           ++ITGA+ GIG E  R L  RG   V+   RD +A  ++          +++  +ELD++
Sbjct: 1   VLITGASRGIGLELVRQLLARGNNTVIATCRDPSAATELAALGASH---SRLHILELDVT 57

Query: 62  SL--ASVRNFASEYNIQHHQLNILINNAGIMGTPFMLS---KDNIELQFATNHLGHFLLT 116
                S    A         L++LINNAGI+ +    S    +++   F  N LG  LLT
Sbjct: 58  DEIAESAEAVAERLGDAG--LDVLINNAGILHSYGPASEVDSEDLLEVFQVNVLGPLLLT 115

Query: 117 NLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLA- 175
              L  + K     G   +IIN+SS           R   I D +   G+ +Y  SK A 
Sbjct: 116 QAFLPLLLK-----GARAKIINISS-----------RVGSIGD-NTSGGWYSYRASKAAL 158

Query: 176 NILHANELARRLKEDGVDITANSVHPGAIAT 206
           N+L  + LA  LK DG  IT  S+HPG + T
Sbjct: 159 NMLTKS-LAVELKRDG--ITVVSLHPGWVRT 186

Sniffer is an NADPH-dependent carbonyl reductase of the classical SDR family. Studies in Drosophila melanogaster implicate Sniffer in the prevention of neurodegeneration due to aging and oxidative-stress. This subgroup also includes Rhodococcus sp. AD45 IsoH, which is an NAD-dependent 1-hydroxy-2-glutathionyl-2-methyl-3-butene dehydrogenase involved in isoprene metabolism, Aspergillus nidulans StcE encoded by a gene which is part of a proposed sterigmatocystin biosynthesis gene cluster, Bacillus circulans SANK 72073 BtrF encoded by a gene found in the butirosin biosynthesis gene cluster, and Aspergillus parasiticus nor-1 involved in the biosynthesis of aflatoxins. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 233

>gnl|CDD|223377 COG0300, DltE, Short-chain dehydrogenases of various substrate specificities [General function prediction only]

 Score = 93.9 bits (234), Expect = 5e-23
 Identities = 58/208 (27%), Positives = 88/208 (42%), Gaps = 25/208 (12%)

Query: 3   IVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSS 62
            +ITGA+SGIG E A+ LA RG ++++  R     + + + +  +    +V+ +  DLS 
Sbjct: 9   ALITGASSGIGAELAKQLARRGYNLILVARREDKLEALAKELEDKT-GVEVEVIPADLSD 67

Query: 63  LASVRNFASEYNIQHHQLNILINNAGIM--GTPFMLSKDNIELQFATNHLGHFLLTNLLL 120
             ++     E   +   +++L+NNAG    G    LS D  E     N L    LT  +L
Sbjct: 68  PEALERLEDELKERGGPIDVLVNNAGFGTFGPFLELSLDEEEEMIQLNILALTRLTKAVL 127

Query: 121 DTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANILHA 180
             M +      G G IIN+ S                  P+ Y     YS +K   +  +
Sbjct: 128 PGMVE-----RGAGHIINIGSAA---GLI----------PTPYMA--VYSATKAFVLSFS 167

Query: 181 NELARRLKEDGVDITANSVHPGAIATNI 208
             L   LK  GV +TA  V PG   T  
Sbjct: 168 EALREELKGTGVKVTA--VCPGPTRTEF 193

Length = 265

>gnl|CDD|187593 cd05332, 11beta-HSD1_like_SDR_c, 11beta-hydroxysteroid dehydrogenase type 1 (11beta-HSD1)-like, classical (c) SDRs

 Score = 93.4 bits (233), Expect = 8e-23
 Identities = 66/210 (31%), Positives = 92/210 (43%), Gaps = 29/210 (13%)

Query: 3   IVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSS 62
           ++ITGA+SGIG E A  LA  G  +V+  R     ++VK     E+ +     + LD+S 
Sbjct: 6   VIITGASSGIGEELAYHLARLGARLVLSARREERLEEVKSEC-LELGAPSPHVVPLDMSD 64

Query: 63  LASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQ---FATNHLGHFLLTNLL 119
           L        E       L+ILINNAG +    +    +I++       N+ G   LT   
Sbjct: 65  LEDAEQVVEEALKLFGGLDILINNAG-ISMRSLFHDTSIDVDRKIMEVNYFGPVALTKAA 123

Query: 120 LDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFR-AYSQSKLANIL 178
           L  + +  R     G I+ VSS    +A   G    KI  P     FR AY+ SK A   
Sbjct: 124 LPHLIE--RSQ---GSIVVVSS----IA---G----KIGVP-----FRTAYAASKHALQG 162

Query: 179 HANELARRLKEDGVDITANSVHPGAIATNI 208
             + L   L E  + +T   V PG I TNI
Sbjct: 163 FFDSLRAELSEPNISVT--VVCPGLIDTNI 190

Human 11beta_HSD1 catalyzes the NADP(H)-dependent interconversion of cortisone and cortisol. This subgroup also includes human dehydrogenase/reductase SDR family member 7C (DHRS7C) and DHRS7B. These proteins have the GxxxGxG nucleotide binding motif and S-Y-K catalytic triad characteristic of the SDRs, but have an atypical C-terminal domain that contributes to homodimerization contacts. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257

>gnl|CDD|187654 cd08951, DR_C-13_KR_SDR_c_like, daunorubicin C-13 ketoreductase (KR), classical (c)-like SDRs

 Score = 92.9 bits (231), Expect = 1e-22
 Identities = 69/206 (33%), Positives = 94/206 (45%), Gaps = 26/206 (12%)

Query: 3   IVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSS 62
           I ITG++ G+G   AR L  +G  VV+  R      D K       P A    +  DLSS
Sbjct: 10  IFITGSSDGLGLAAARTLLHQGHEVVLHARSQKRAADAK----AACPGAAG-VLIGDLSS 64

Query: 63  LASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKD-NIELQFATNHLGHFLLTNLLLD 121
           LA  R  A + N      + +I+NAGI+  P   + D  I    A N L  ++LT L+  
Sbjct: 65  LAETRKLADQVNAIGR-FDAVIHNAGILSGPNRKTPDTGIPAMVAVNVLAPYVLTALI-- 121

Query: 122 TMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKIN-DPSGYNGFRAYSQSKLANILHA 180
              K         R+I +SS  HR         D I+    G N   AYS SKL  +  A
Sbjct: 122 RRPK---------RLIYLSSGMHRGG---NASLDDIDWFNRGENDSPAYSDSKLHVLTLA 169

Query: 181 NELARRLKEDGVDITANSVHPGAIAT 206
             +ARR K    D+++N+VHPG + T
Sbjct: 170 AAVARRWK----DVSSNAVHPGWVPT 191

Daunorubicin is a clinically important therapeutic compound used in some cancer treatments. Daunorubicin C-13 ketoreductase is member of the classical SDR family with a canonical glycine-rich NAD(P)-binding motif, but lacking a complete match to the active site tetrad characteristic of this group. The critical Tyr, plus the Lys and upstream Asn are present, but the catalytic Ser is replaced, generally by Gln. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type KRs have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 260

>gnl|CDD|187632 cd05374, 17beta-HSD-like_SDR_c, 17beta hydroxysteroid dehydrogenase-like, classical (c) SDRs

 Score = 92.3 bits (230), Expect = 2e-22
 Identities = 57/214 (26%), Positives = 90/214 (42%), Gaps = 33/214 (15%)

Query: 3   IVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSS 62
           ++ITG +SGIG   A  LA +G  V+   R+      ++        + +V  +ELD++ 
Sbjct: 3   VLITGCSSGIGLALALALAAQGYRVIATARNP---DKLESLGELLNDNLEV--LELDVTD 57

Query: 63  LASVRNFASEYNIQHHQLNILINNAGIMGT-PFM-LSKDNIELQFATNHLGHFLLTNLLL 120
             S++    E   +  ++++L+NNAG     P    S + +   F  N  G   +T   L
Sbjct: 58  EESIKAAVKEVIERFGRIDVLVNNAGYGLFGPLEETSIEEVRELFEVNVFGPLRVTRAFL 117

Query: 121 DTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANILHA 180
             M    RK G  GRI+NVSS    +             P+ + G   Y  SK A  L A
Sbjct: 118 PLM----RKQGS-GRIVNVSSVAGLV-------------PTPFLG--PYCASKAA--LEA 155

Query: 181 --NELARRLKEDGVDITANSVHPGAIATNIIRHN 212
               L   L   G+ +T   + PG + T    + 
Sbjct: 156 LSESLRLELAPFGIKVT--IIEPGPVRTGFADNA 187

17beta-hydroxysteroid dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 248

>gnl|CDD|226674 COG4221, COG4221, Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]

 Score = 91.2 bits (227), Expect = 4e-22
 Identities = 62/215 (28%), Positives = 90/215 (41%), Gaps = 36/215 (16%)

Query: 3   IVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSS 62
            +ITGA+SGIG  TAR LA  G  VV+  R     ++  E +  EI +    A+ LD++ 
Sbjct: 9   ALITGASSGIGEATARALAEAGAKVVLAAR----REERLEALADEIGAGAALALALDVTD 64

Query: 63  LASVRNFASEYNIQHHQLNILINNAGIM-GTPFM-LSKDNIELQFATNHLGHFLLTNLLL 120
            A+V         +  +++IL+NNAG+  G P      D+ +    TN  G    T  +L
Sbjct: 65  RAAVEAAIEALPEEFGRIDILVNNAGLALGDPLDEADLDDWDRMIDTNVKGLLNGTRAVL 124

Query: 121 DTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNG----FRAYSQSKLAN 176
             M    RKS   G IIN+ S   R  Y  G         + Y       RA+S      
Sbjct: 125 PGMV--ERKS---GHIINLGSIAGRYPYPGG---------AVYGATKAAVRAFSLG---- 166

Query: 177 ILHANELARRLKEDGVDITANSVHPGAIATNIIRH 211
                 L + L   G+ +T   + PG + T     
Sbjct: 167 ------LRQELAGTGIRVT--VISPGLVETTEFST 193

Length = 246

>gnl|CDD|235506 PRK05565, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 88.4 bits (220), Expect = 4e-21
 Identities = 64/213 (30%), Positives = 93/213 (43%), Gaps = 37/213 (17%)

Query: 4   VITGATSGIGTETARVLALRGVHVVMGV-RDIAAGKDVKETIVKEIPSAKVDAM--ELDL 60
           ++TGA+ GIG   A +LA  G  VV+    +  A +++    ++EI     DA+  + D+
Sbjct: 9   IVTGASGGIGRAIAELLAKEGAKVVIAYDINEEAAQEL----LEEIKEEGGDAIAVKADV 64

Query: 61  SSLASVRNFASEYNIQHHQLNILINNAGIM-GTPFM-LSKDNIELQFATNHLGHFLLTNL 118
           SS   V N   +   +  +++IL+NNAGI        ++ +  +     N  G  LLT  
Sbjct: 65  SSEEDVENLVEQIVEKFGKIDILVNNAGISNFGLVTDMTDEEWDRVIDVNLTGVMLLTRY 124

Query: 119 LLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRA---YSQSKLA 175
            L  M K  RKSG    I+N+SS                    G  G      YS SK A
Sbjct: 125 ALPYMIK--RKSGV---IVNISSIW------------------GLIGASCEVLYSASKGA 161

Query: 176 NILHANELARRLKEDGVDITANSVHPGAIATNI 208
                  LA+ L   G  I  N+V PGAI T +
Sbjct: 162 VNAFTKALAKELAPSG--IRVNAVAPGAIDTEM 192

Length = 247

>gnl|CDD|237218 PRK12825, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 87.2 bits (217), Expect = 1e-20
 Identities = 59/211 (27%), Positives = 94/211 (44%), Gaps = 27/211 (12%)

Query: 3   IVITGATSGIGTETARVLALRGVHVVMGVR-DIAAGKDVKETIVKEIPSAKVDAMELDLS 61
            ++TGA  G+G   A  LA  G  VV+  R D  A +++ E +       +  A++ D++
Sbjct: 9   ALVTGAARGLGRAIALRLARAGADVVVHYRSDEEAAEELVEAVEAL--GRRAQAVQADVT 66

Query: 62  SLASVRNFASEYNIQHHQLNILINNAGIMG-TPFM-LSKDNIELQFATNHLGHFLLTNLL 119
             A++    +    +  +++IL+NNAGI    P   +S D  +     N  G F L   +
Sbjct: 67  DKAALEAAVAAAVERFGRIDILVNNAGIFEDKPLADMSDDEWDEVIDVNLSGVFHLLRAV 126

Query: 120 LDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANILH 179
           +  M+K        GRI+N+SS         G+         G+ G   Y+ +K   +  
Sbjct: 127 VPPMRKQ-----RGGRIVNISSVA-------GLP--------GWPGRSNYAAAKAGLVGL 166

Query: 180 ANELARRLKEDGVDITANSVHPGAIATNIIR 210
              LAR L E G  IT N V PG I T++  
Sbjct: 167 TKALARELAEYG--ITVNMVAPGDIDTDMKE 195

Length = 249

>gnl|CDD|212493 cd08932, HetN_like_SDR_c, HetN oxidoreductase-like, classical (c) SDR

 Score = 84.0 bits (208), Expect = 1e-19
 Identities = 54/208 (25%), Positives = 86/208 (41%), Gaps = 32/208 (15%)

Query: 3   IVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSS 62
            ++TGA+ GIG E AR LA  G  V +G+R+     D+            V+A+  D   
Sbjct: 3   ALVTGASRGIGIEIARALARDGYRVSLGLRNPE---DLAALSASG---GDVEAVPYDARD 56

Query: 63  LASVRNFASEYNIQHHQLNILINNAGIMG-TPFM-LSKDNIELQFATNHLGHFLLTNLLL 120
               R        +  ++++L++NAGI   T     S   +E  F+ N +    LT  LL
Sbjct: 57  PEDARALVDALRDRFGRIDVLVHNAGIGRPTTLREGSDAELEAHFSINVIAPAELTRALL 116

Query: 121 DTMKKTARKSGGEGRIINVSS-EGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANILH 179
             +++        GR++ ++S  G R                   G   YS SK A    
Sbjct: 117 PALREAGS-----GRVVFLNSLSGKR----------------VLAGNAGYSASKFALRAL 155

Query: 180 ANELARRLKEDGVDITANSVHPGAIATN 207
           A+ L +   + GV ++A  V PG + T 
Sbjct: 156 AHALRQEGWDHGVRVSA--VCPGFVDTP 181

This subgroup includes Anabaena sp. strain PCC 7120 HetN, a putative oxidoreductase involved in heterocyst differentiation, and related proteins. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 223

>gnl|CDD|187584 cd05323, ADH_SDR_c_like, insect type alcohol dehydrogenase (ADH)-like, classical (c) SDRs

 Score = 83.5 bits (207), Expect = 3e-19
 Identities = 51/211 (24%), Positives = 79/211 (37%), Gaps = 24/211 (11%)

Query: 4   VITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSL 63
           +ITG  SGIG  TA++L  +G  V   + D          +    P  K   ++ D++S 
Sbjct: 4   IITGGASGIGLATAKLLLKKGAKVA--ILDRNENPGAAAELQAINPKVKATFVQCDVTSW 61

Query: 64  ASVRNFASEYNIQHHQLNILINNAGIMGTPFMLS----KDNIELQFATNHLGHFLLTNLL 119
             +     +   +  +++ILINNAGI+     L         E     N  G    T L 
Sbjct: 62  EQLAAAFKKAIEKFGRVDILINNAGILDEKSYLFAGKLPPPWEKTIDVNLTGVINTTYLA 121

Query: 120 LDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANILH 179
           L  M K     G  G I+N+ S       +   +F              YS SK   +  
Sbjct: 122 LHYMDKNKGGKG--GVIVNIGSVA---GLYPAPQFP------------VYSASKHGVVGF 164

Query: 180 ANELARRLKEDGVDITANSVHPGAIATNIIR 210
              LA  L+     +  N++ PG   T ++ 
Sbjct: 165 TRSLADLLEYK-TGVRVNAICPGFTNTPLLP 194

This subgroup contains insect type ADH, and 15-hydroxyprostaglandin dehydrogenase (15-PGDH) type I; these proteins are classical SDRs. ADH catalyzes the NAD+-dependent oxidation of alcohols to aldehydes/ketones. This subgroup is distinct from the zinc-dependent alcohol dehydrogenases of the medium chain dehydrogenase/reductase family, and evolved in fruit flies to allow the digestion of fermenting fruit. 15-PGDH catalyzes the NAD-dependent interconversion of (5Z,13E)-(15S)-11alpha,15-dihydroxy-9-oxoprost-13-enoate and (5Z,13E)-11alpha-hydroxy-9,15-dioxoprost-13-enoate, and has a typical SDR glycine-rich NAD-binding motif, which is not fully present in ADH. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 244

>gnl|CDD|235500 PRK05557, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

 Score = 82.2 bits (204), Expect = 9e-19
 Identities = 66/215 (30%), Positives = 93/215 (43%), Gaps = 41/215 (19%)

Query: 3   IVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSA--KVDAMELDL 60
            ++TGA+ GIG   A  LA +G +VV+      AG    E +V EI +   K  A++ D+
Sbjct: 8   ALVTGASRGIGRAIAERLAAQGANVVINYASSEAGA---EALVAEIGALGGKALAVQGDV 64

Query: 61  SSLASVRNFASEYNIQHHQLNILINNAGIM-GTPFM-LSKDNIELQFATNHLGHFLLTNL 118
           S   SV     E   +   ++IL+NNAGI      M + +++ +    TN  G F LT  
Sbjct: 65  SDAESVERAVDEAKAEFGGVDILVNNAGITRDNLLMRMKEEDWDRVIDTNLTGVFNLTKA 124

Query: 119 LLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANIL 178
           +   M K        GRIIN+SS               +    G  G   Y+ SK    +
Sbjct: 125 VARPMMK-----QRSGRIINISS---------------VVGLMGNPGQANYAASKAG--V 162

Query: 179 H------ANELARRLKEDGVDITANSVHPGAIATN 207
                  A ELA R       IT N+V PG I T+
Sbjct: 163 IGFTKSLARELASR------GITVNAVAPGFIETD 191

Length = 248

>gnl|CDD|180744 PRK06914, PRK06914, short chain dehydrogenase; Provisional

 Score = 82.4 bits (204), Expect = 1e-18
 Identities = 55/207 (26%), Positives = 92/207 (44%), Gaps = 25/207 (12%)

Query: 4   VITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSL 63
           ++TGA+SG G  T   LA +G  V+  +R+    +++     +      +   +LD++  
Sbjct: 7   IVTGASSGFGLLTTLELAKKGYLVIATMRNPEKQENLLSQATQLNLQQNIKVQQLDVTDQ 66

Query: 64  ASVRNFASEYNIQHHQLNILINNAGIMGTPFM--LSKDNIELQFATNHLGHFLLTNLLLD 121
            S+ NF      +  ++++L+NNAG     F+  +  +    QF TN  G   +T  +L 
Sbjct: 67  NSIHNFQLVLK-EIGRIDLLVNNAGYANGGFVEEIPVEEYRKQFETNVFGAISVTQAVLP 125

Query: 122 TMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANILHAN 181
            M+K        G+IIN+SS               I+   G+ G   Y  SK A    + 
Sbjct: 126 YMRKQ-----KSGKIINISS---------------ISGRVGFPGLSPYVSSKYALEGFSE 165

Query: 182 ELARRLKEDGVDITANSVHPGAIATNI 208
            L   LK  G+D+    + PG+  TNI
Sbjct: 166 SLRLELKPFGIDVAL--IEPGSYNTNI 190

Length = 280

>gnl|CDD|235975 PRK07231, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 80.6 bits (200), Expect = 3e-18
 Identities = 61/206 (29%), Positives = 88/206 (42%), Gaps = 28/206 (13%)

Query: 4   VITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSL 63
           ++TGA+SGIG   AR  A  G  VV+  R+  A + V   I+      +  A+  D+S  
Sbjct: 9   IVTGASSGIGEGIARRFAAEGARVVVTDRNEEAAERVAAEILAG---GRAIAVAADVSDE 65

Query: 64  ASVRNFASEYNIQHHQLNILINNAGI--MGTPFM-LSKDNIELQFATNHLGHFLLTNLLL 120
           A V    +    +   ++IL+NNAG      P + + +   +  FA N    +L T   +
Sbjct: 66  ADVEAAVAAALERFGSVDILVNNAGTTHRNGPLLDVDEAEFDRIFAVNVKSPYLWTQAAV 125

Query: 121 DTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANILHA 180
             M    R  GG G I+NV+S         G+R      P    G   Y+ SK A I   
Sbjct: 126 PAM----RGEGG-GAIVNVASTA-------GLR------PRP--GLGWYNASKGAVITLT 165

Query: 181 NELARRLKEDGVDITANSVHPGAIAT 206
             LA  L  D   I  N+V P  + T
Sbjct: 166 KALAAELGPDK--IRVNAVAPVVVET 189

Length = 251

>gnl|CDD|187628 cd05370, SDR_c2, classical (c) SDR, subgroup 2

 Score = 80.0 bits (198), Expect = 4e-18
 Identities = 46/144 (31%), Positives = 64/144 (44%), Gaps = 17/144 (11%)

Query: 3   IVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSS 62
           ++ITG TSGIG   AR     G  V++  R     ++      KE+P+     + LD+  
Sbjct: 8   VLITGGTSGIGLALARKFLEAGNTVIITGRR----EERLAEAKKELPNIH--TIVLDVGD 61

Query: 63  LASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSK-----DNIELQFATNHLGHFLLTN 117
             SV   A     ++  L+ILINNAGI   P  L       D  + +  TN +G   L  
Sbjct: 62  AESVEALAEALLSEYPNLDILINNAGIQ-RPIDLRDPASDLDKADTEIDTNLIGPIRLIK 120

Query: 118 LLLDTMKKTARKSGGEGRIINVSS 141
             L  +KK       E  I+NVSS
Sbjct: 121 AFLPHLKKQ-----PEATIVNVSS 139

Short-chain dehydrogenases/reductases (SDRs, aka Tyrosine-dependent oxidoreductases) are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 228

>gnl|CDD|187598 cd05339, 17beta-HSDXI-like_SDR_c, human 17-beta-hydroxysteroid dehydrogenase XI-like, classical (c) SDRs

 Score = 80.0 bits (198), Expect = 5e-18
 Identities = 59/213 (27%), Positives = 79/213 (37%), Gaps = 27/213 (12%)

Query: 3   IVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVK-EIPSAKVDAMELDLS 61
           ++ITG  SGIG   A   A RG  VV  + DI      +ET         KV   + D+S
Sbjct: 2   VLITGGGSGIGRLLALEFAKRGAKVV--ILDINEKG-AEETANNVRKAGGKVHYYKCDVS 58

Query: 62  SLASVRNFASEYNIQHHQLNILINNAGIM-GTPFM-LSKDNIELQFATNHLGHFLLTNLL 119
               V   A +   +   + ILINNAG++ G   + L  + IE  F  N L HF  T   
Sbjct: 59  KREEVYEAAKKIKKEVGDVTILINNAGVVSGKKLLELPDEEIEKTFEVNTLAHFWTTKAF 118

Query: 120 LDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANILH 179
           L  M +        G I+ ++S                       G   Y  SK A +  
Sbjct: 119 LPDMLERNH-----GHIVTIASV---AGL------------ISPAGLADYCASKAAAVGF 158

Query: 180 ANELARRLKEDGVD-ITANSVHPGAIATNIIRH 211
              L   LK  G   I    V P  I T + + 
Sbjct: 159 HESLRLELKAYGKPGIKTTLVCPYFINTGMFQG 191

17-beta-hydroxysteroid dehydrogenases (17betaHSD) are a group of isozymes that catalyze activation and inactivation of estrogen and androgens. 17betaHSD type XI, a classical SDR, preferentially converts 3alpha-adiol to androsterone but not numerous other tested steroids. This subgroup of classical SDRs also includes members identified as retinol dehydrogenases, which convert retinol to retinal, a property that overlaps with 17betaHSD activity. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 243

>gnl|CDD|187594 cd05333, BKR_SDR_c, beta-Keto acyl carrier protein reductase (BKR), involved in Type II FAS, classical (c) SDRs

 Score = 78.7 bits (195), Expect = 1e-17
 Identities = 62/214 (28%), Positives = 91/214 (42%), Gaps = 34/214 (15%)

Query: 3   IVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSS 62
            ++TGA+ GIG   A  LA  G  V +  R   A  +  E I          A+E D+S 
Sbjct: 3   ALVTGASRGIGRAIALRLAAEGAKVAVTDRSEEAAAETVEEIKA--LGGNAAALEADVSD 60

Query: 63  LASVRNFASEYNIQHHQLNILINNAGIMGTPFML--SKDNIELQFATNHLGHFLLTNLLL 120
             +V     +   +   ++IL+NNAGI     ++  S+++ +     N  G F +T  ++
Sbjct: 61  REAVEALVEKVEAEFGPVDILVNNAGITRDNLLMRMSEEDWDAVINVNLTGVFNVTQAVI 120

Query: 121 DTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANI-LH 179
             M K  R+S   GRIIN+SS               +    G  G   Y+ SK   I   
Sbjct: 121 RAMIK--RRS---GRIINISS---------------VVGLIGNPGQANYAASKAGVIGFT 160

Query: 180 ---ANELARRLKEDGVDITANSVHPGAIATNIIR 210
              A ELA R       IT N+V PG I T++  
Sbjct: 161 KSLAKELASR------GITVNAVAPGFIDTDMTD 188

This subgroup includes the Escherichai coli K12 BKR, FabG. BKR catalyzes the NADPH-dependent reduction of ACP in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of four elongation steps, which are repeated to extend the fatty acid chain through the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and a final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I FAS utilizes one or two multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet) NAD(P)(H) binding region and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H) binding pattern: TGxxxGxG in classical SDRs. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P) binding motif and an altered active site motif (YXXXN). Fungal type type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P) binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr-151 and Lys-155, and well as Asn-111 (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 240

>gnl|CDD|215720 pfam00106, adh_short, short chain dehydrogenase

 Score = 77.2 bits (191), Expect = 1e-17
 Identities = 35/144 (24%), Positives = 58/144 (40%), Gaps = 16/144 (11%)

Query: 3   IVITGATSGIGTETARVLALRGV-HVVMGVRDIAAGKDVKETIVKEIPS--AKVDAMELD 59
           ++ITG T G+G   AR LA  G  H+V+  R   A       +V E+ +  A+V     D
Sbjct: 3   VLITGGTGGLGLALARWLAAEGARHLVLVSRRGPAPGA--AELVAELEALGAEVTVAACD 60

Query: 60  LSSLASVRNFASEYNIQHHQLNILINNAGI--MGTPFMLSKDNIELQFATNHLGHFLLTN 117
           ++   ++    +        L+ +++NAG+   G    L+ +  E   A    G + L  
Sbjct: 61  VADRDALAALLAALPAALGPLDGVVHNAGVLDDGPLEELTPERFERVLAPKVTGAWNLHE 120

Query: 118 LLLDTMKKTARKSGGEGRIINVSS 141
           L  D            G  +  SS
Sbjct: 121 LTRDL---------DLGAFVLFSS 135

This family contains a wide variety of dehydrogenases. Length = 167

>gnl|CDD|233590 TIGR01830, 3oxo_ACP_reduc, 3-oxoacyl-(acyl-carrier-protein) reductase

 Score = 78.4 bits (194), Expect = 2e-17
 Identities = 62/214 (28%), Positives = 89/214 (41%), Gaps = 41/214 (19%)

Query: 4   VITGATSGIGTETARVLALRGVHVVM-GVRDIAAGKDVKETIVKEIPSAKVDAMELDLSS 62
           ++TGA+ GIG   A  LA  G  V++         ++V E +  +    K   +  D+S 
Sbjct: 2   LVTGASRGIGRAIALKLAKEGAKVIITYRSSEEGAEEVVEEL--KAYGVKALGVVCDVSD 59

Query: 63  LASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNI-----ELQF----ATNHLGHF 113
              V+    E   +   ++IL+NNAGI       ++DN+     E  +     TN  G F
Sbjct: 60  REDVKAVVEEIEEELGPIDILVNNAGI-------TRDNLLMRMKEEDWDAVIDTNLTGVF 112

Query: 114 LLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSK 173
            LT  +L  M K  R     GRIIN+SS               +    G  G   Y+ SK
Sbjct: 113 NLTQAVLRIMIK-QRS----GRIINISS---------------VVGLMGNAGQANYAASK 152

Query: 174 LANILHANELARRLKEDGVDITANSVHPGAIATN 207
              I     LA+ L      IT N+V PG I T+
Sbjct: 153 AGVIGFTKSLAKELASRN--ITVNAVAPGFIDTD 184

This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis [Fatty acid and phospholipid metabolism, Biosynthesis]. Length = 239

>gnl|CDD|187620 cd05362, THN_reductase-like_SDR_c, tetrahydroxynaphthalene/trihydroxynaphthalene reductase-like, classical (c) SDRs

 Score = 77.7 bits (192), Expect = 3e-17
 Identities = 59/208 (28%), Positives = 88/208 (42%), Gaps = 31/208 (14%)

Query: 3   IVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAM--ELDL 60
            ++TGA+ GIG   A+ LA  G  VV+   + A+ K   E +V EI +A   A+  + D+
Sbjct: 6   ALVTGASRGIGRAIAKRLARDGASVVV---NYASSKAAAEEVVAEIEAAGGKAIAVQADV 62

Query: 61  SSLASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIEL--QFATNHLGHFLLTNL 118
           S  + V             ++IL+NNAG+M    +      E    F  N  G F     
Sbjct: 63  SDPSQVARLFDAAEKAFGGVDILVNNAGVMLKKPIAETSEEEFDRMFTVNTKGAFF---- 118

Query: 119 LLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANIL 178
               +++ A++    GRIIN+SS                        + AY+ SK A   
Sbjct: 119 ---VLQEAAKRLRDGGRIINISSSLTAA---------------YTPNYGAYAGSKAAVEA 160

Query: 179 HANELARRLKEDGVDITANSVHPGAIAT 206
               LA+ L   G  IT N+V PG + T
Sbjct: 161 FTRVLAKELG--GRGITVNAVAPGPVDT 186

1,3,6,8-tetrahydroxynaphthalene reductase (4HNR) of Magnaporthe grisea and the related 1,3,8-trihydroxynaphthalene reductase (3HNR) are typical members of the SDR family containing the canonical glycine rich NAD(P)-binding site and active site tetrad, and function in fungal melanin biosynthesis. This subgroup also includes an SDR from Norway spruce that may function to protect against both biotic and abitoic stress. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 243

>gnl|CDD|187622 cd05364, SDR_c11, classical (c) SDR, subgroup 11

 Score = 77.1 bits (190), Expect = 6e-17
 Identities = 54/210 (25%), Positives = 84/210 (40%), Gaps = 26/210 (12%)

Query: 4   VITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVK-EIPSAKVDAMELDLSS 62
           +ITG++SGIG  TA + A  G  + +  RD    ++ +++ ++  +   K+  +  DL+ 
Sbjct: 7   IITGSSSGIGAGTAILFARLGARLALTGRDAERLEETRQSCLQAGVSEKKILLVVADLTE 66

Query: 63  LASVRNFASEYNIQHHQLNILINNAG--IMGTPFMLSKDNIELQFATNHLGHFLLTNLLL 120
                   S    +  +L+IL+NNAG    G       +  +     N      LT L +
Sbjct: 67  EEGQDRIISTTLAKFGRLDILVNNAGILAKGGGEDQDIEEYDKVMNLNLRAVIYLTKLAV 126

Query: 121 DTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANILHA 180
             + KT      +G I+NVSS               +     + G   Y  SK A     
Sbjct: 127 PHLIKT------KGEIVNVSS---------------VAGGRSFPGVLYYCISKAALDQFT 165

Query: 181 NELARRLKEDGVDITANSVHPGAIATNIIR 210
              A  L   GV +  NSV PG I T   R
Sbjct: 166 RCTALELAPKGVRV--NSVSPGVIVTGFHR 193

SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 253

>gnl|CDD|183833 PRK12939, PRK12939, short chain dehydrogenase; Provisional

 Score = 76.9 bits (190), Expect = 7e-17
 Identities = 58/206 (28%), Positives = 83/206 (40%), Gaps = 26/206 (12%)

Query: 3   IVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSS 62
            ++TGA  G+G   A  LA  G  V       A  +++   +  E    +  A+  DL+ 
Sbjct: 10  ALVTGAARGLGAAFAEALAEAGATVAFNDGLAAEARELAAAL--EAAGGRAHAIAADLAD 67

Query: 63  LASVRNFASEYNIQHHQLNILINNAGIMGTPFM--LSKDNIELQFATNHLGHFLLTNLLL 120
            ASV+ F          L+ L+NNAGI  +     L  D  +     N  G FL+    L
Sbjct: 68  PASVQRFFDAAAAALGGLDGLVNNAGITNSKSATELDIDTWDAVMNVNVRGTFLMLRAAL 127

Query: 121 DTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANILHA 180
             ++ + R     GRI+N++S+                   G     AY  SK A I   
Sbjct: 128 PHLRDSGR-----GRIVNLASDTALW---------------GAPKLGAYVASKGAVIGMT 167

Query: 181 NELARRLKEDGVDITANSVHPGAIAT 206
             LAR L   G  IT N++ PG  AT
Sbjct: 168 RSLARELGGRG--ITVNAIAPGLTAT 191

Length = 250

>gnl|CDD|181491 PRK08589, PRK08589, short chain dehydrogenase; Validated

 Score = 77.5 bits (191), Expect = 7e-17
 Identities = 70/211 (33%), Positives = 101/211 (47%), Gaps = 33/211 (15%)

Query: 4   VITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSA--KVDAMELDLS 61
           VITGA++GIG  +A  LA  G +V+    DIA    V ET V +I S   K  A  +D+S
Sbjct: 10  VITGASTGIGQASAIALAQEGAYVLAV--DIAEA--VSET-VDKIKSNGGKAKAYHVDIS 64

Query: 62  SLASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQ---FATNHLGHFLLTNL 118
               V++FASE   Q  ++++L NNAG+      + +  +++     A +  G FL+T +
Sbjct: 65  DEQQVKDFASEIKEQFGRVDVLFNNAGVDNAAGRIHEYPVDVFDKIMAVDMRGTFLMTKM 124

Query: 119 LLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANIL 178
           LL  M +        G IIN SS   + A       D     SGYN       +K A I 
Sbjct: 125 LLPLMMEQG------GSIINTSSFSGQAA-------DL--YRSGYNA------AKGAVIN 163

Query: 179 HANELARRLKEDGVDITANSVHPGAIATNII 209
               +A     DG  I AN++ PG I T ++
Sbjct: 164 FTKSIAIEYGRDG--IRANAIAPGTIETPLV 192

Length = 272

>gnl|CDD|187645 cd08941, 3KS_SDR_c, 3-keto steroid reductase, classical (c) SDRs

 Score = 77.0 bits (190), Expect = 1e-16
 Identities = 64/249 (25%), Positives = 100/249 (40%), Gaps = 54/249 (21%)

Query: 3   IVITGATSGIGTETA-RVLAL----RGVHVVMGVRDIAAGKDVKETIVKEIPSAKV--DA 55
           +++TGA SG+G     R+LA       + +++  R++   +     ++   P A+V  D 
Sbjct: 4   VLVTGANSGLGLAICERLLAEDDENPELTLILACRNLQRAEAACRALLASHPDARVVFDY 63

Query: 56  MELDLSSLASVRNFASEYNIQHHQLNILINNAGIMGTPF--------------------- 94
           + +DLS++ SV   A E   ++ +L+ L  NAGIM  P                      
Sbjct: 64  VLVDLSNMVSVFAAAKELKKRYPRLDYLYLNAGIMPNPGIDWIGAIKEVLTNPLFAVTNP 123

Query: 95  --------MLSK------DNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVS 140
                   +LS+      D +   F TN  GH+ L   L   +     +S G  +II  S
Sbjct: 124 TYKIQAEGLLSQGDKATEDGLGEVFQTNVFGHYYLIRELEPLL----CRSDGGSQIIWTS 179

Query: 141 SEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVH 200
           S      Y     F  + D     G   YS SK    L +  L R+  + GV   +  VH
Sbjct: 180 SLNASPKY-----FS-LEDIQHLKGPAPYSSSKYLVDLLSLALNRKFNKLGVY--SYVVH 231

Query: 201 PGAIATNII 209
           PG   TN+ 
Sbjct: 232 PGICTTNLT 240

3-keto steroid reductase (in concert with other enzymes) catalyzes NADP-dependent sterol C-4 demethylation, as part of steroid biosynthesis. 3-keto reductase is a classical SDR, with a well conserved canonical active site tetrad and fairly well conserved characteristic NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 290

>gnl|CDD|181136 PRK07825, PRK07825, short chain dehydrogenase; Provisional

 Score = 76.1 bits (188), Expect = 2e-16
 Identities = 54/209 (25%), Positives = 80/209 (38%), Gaps = 30/209 (14%)

Query: 3   IVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSS 62
           + ITG   GIG  TAR LA  G  V +G  D A  K+       E+    V    LD++ 
Sbjct: 8   VAITGGARGIGLATARALAALGARVAIGDLDEALAKET----AAELG--LVVGGPLDVTD 61

Query: 63  LASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDN--IELQFATNHLGHFLLTNLLL 120
            AS   F          +++L+NNAG+M     L + +         N  G  L + L  
Sbjct: 62  PASFAAFLDAVEADLGPIDVLVNNAGVMPVGPFLDEPDAVTRRILDVNVYGVILGSKLAA 121

Query: 121 DTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANILHA 180
             M    R   G G ++NV+S   ++                  G   Y  SK A +   
Sbjct: 122 PRM--VPR---GRGHVVNVASLAGKIP---------------VPGMATYCASKHAVVGFT 161

Query: 181 NELARRLKEDGVDITANSVHPGAIATNII 209
           +     L+  GV ++   V P  + T +I
Sbjct: 162 DAARLELRGTGVHVSV--VLPSFVNTELI 188

Length = 273

>gnl|CDD|187616 cd05358, GlcDH_SDR_c, glucose 1 dehydrogenase (GlcDH), classical (c) SDRs

 Score = 75.9 bits (187), Expect = 2e-16
 Identities = 62/210 (29%), Positives = 94/210 (44%), Gaps = 30/210 (14%)

Query: 4   VITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAM--ELDLS 61
           ++TGA+SGIG   A  LA  G +VV+  R   + +D  E +V+EI +    A+  + D+S
Sbjct: 7   LVTGASSGIGKAIAIRLATAGANVVVNYR---SKEDAAEEVVEEIKAVGGKAIAVQADVS 63

Query: 62  SLASVRNFASEYNIQHHQLNILINNAGIMGTPFM---LSKDNIELQFATNHLGHFLLTNL 118
               V         +   L+IL+NNAG+ G       ++ ++       N  G FL    
Sbjct: 64  KEEDVVALFQSAIKEFGTLDILVNNAGLQG-DASSHEMTLEDWNKVIDVNLTGQFLCARE 122

Query: 119 LLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANIL 178
            +   +K+  K    G+IIN+SS       HE I       P  + G   Y+ SK    +
Sbjct: 123 AIKRFRKSKIK----GKIINMSS------VHEKI-------P--WPGHVNYAASKGGVKM 163

Query: 179 HANELARRLKEDGVDITANSVHPGAIATNI 208
               LA+     G  I  N++ PGAI T I
Sbjct: 164 MTKTLAQEYAPKG--IRVNAIAPGAINTPI 191

GlcDH, is a tetrameric member of the SDR family, it catalyzes the NAD(P)-dependent oxidation of beta-D-glucose to D-glucono-delta-lactone. GlcDH has a typical NAD-binding site glycine-rich pattern as well as the canonical active site tetrad (YXXXK motif plus upstream Ser and Asn). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 253

>gnl|CDD|181198 PRK08017, PRK08017, oxidoreductase; Provisional

 Score = 75.9 bits (187), Expect = 2e-16
 Identities = 68/207 (32%), Positives = 89/207 (42%), Gaps = 33/207 (15%)

Query: 3   IVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSS 62
           ++ITG +SGIG E A  L  RG  V+   R        K   V  + S     + LDL  
Sbjct: 5   VLITGCSSGIGLEAALELKRRGYRVLAACR--------KPDDVARMNSLGFTGILLDLDD 56

Query: 63  LASVRNFASEY-NIQHHQLNILINNAG--IMGTPFMLSKDNIELQFATNHLGHFLLTNLL 119
             SV   A E   +  ++L  L NNAG  + G    +S+  +E QF+TN  G   LT LL
Sbjct: 57  PESVERAADEVIALTDNRLYGLFNNAGFGVYGPLSTISRQQMEQQFSTNFFGTHQLTMLL 116

Query: 120 LDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANILH 179
           L  M        GEGRI+  SS               I+ P    G  AY+ SK A  L 
Sbjct: 117 LPAM-----LPHGEGRIVMTSSV-----------MGLISTP----GRGAYAASKYA--LE 154

Query: 180 ANELARRLKEDGVDITANSVHPGAIAT 206
           A   A R++     I  + + PG I T
Sbjct: 155 AWSDALRMELRHSGIKVSLIEPGPIRT 181

Length = 256

>gnl|CDD|187587 cd05326, secoisolariciresinol-DH_like_SDR_c, secoisolariciresinol dehydrogenase (secoisolariciresinol-DH)-like, classical (c) SDRs

 Score = 75.6 bits (186), Expect = 2e-16
 Identities = 60/220 (27%), Positives = 90/220 (40%), Gaps = 34/220 (15%)

Query: 4   VITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSL 63
           +ITG  SGIG  TAR+ A  G  VV  + DI    D  + +  E+    +  +  D++  
Sbjct: 8   IITGGASGIGEATARLFAKHGARVV--IADID--DDAGQAVAAELGDPDISFVHCDVTVE 63

Query: 64  ASVRNFASEYNIQHHQLNILINNAGIMGTP--FML--SKDNIELQFATNHLGHFLLTNLL 119
           A VR        +  +L+I+ NNAG++G P   +L  S +  E     N  G FL     
Sbjct: 64  ADVRAAVDTAVARFGRLDIMFNNAGVLGAPCYSILETSLEEFERVLDVNVYGAFL----- 118

Query: 120 LDTMKKTARKSGGEGR--IINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANI 177
               K  AR      +  I++V+S         G+         G  G  AY+ SK A +
Sbjct: 119 --GTKHAARVMIPAKKGSIVSVASVA-------GVV--------GGLGPHAYTASKHAVL 161

Query: 178 LHANELARRLKEDGVDITANSVHPGAIATNIIRHNSLFRS 217
                 A  L E G+ +  N V P  +AT ++        
Sbjct: 162 GLTRSAATELGEHGIRV--NCVSPYGVATPLLTAGFGVED 199

Podophyllum secoisolariciresinol-DH is a homo tetrameric, classical SDR that catalyzes the NAD-dependent conversion of (-)-secoisolariciresinol to (-)-matairesinol via a (-)-lactol intermediate. (-)-Matairesinol is an intermediate to various 8'-lignans, including the cancer-preventive mammalian lignan, and those involved in vascular plant defense. This subgroup also includes rice momilactone A synthase which catalyzes the conversion of 3beta-hydroxy-9betaH-pimara-7,15-dien-19,6beta-olide into momilactone A, Arabidopsis ABA2 which during abscisic acid (ABA) biosynthesis, catalyzes the conversion of xanthoxin to abscisic aldehyde and, maize Tasselseed2 which participate in the maize sex determination pathway. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 249

>gnl|CDD|235725 PRK06179, PRK06179, short chain dehydrogenase; Provisional

 Score = 74.2 bits (183), Expect = 9e-16
 Identities = 46/141 (32%), Positives = 67/141 (47%), Gaps = 17/141 (12%)

Query: 3   IVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSS 62
            ++TGA+SGIG  TA  LA  G  V    R+ A             P   V+ +ELD++ 
Sbjct: 7   ALVTGASSGIGRATAEKLARAGYRVFGTSRNPARAA----------PIPGVELLELDVTD 56

Query: 63  LASVRNFASEYNIQHHQLNILINNAGIM--GTPFMLSKDNIELQFATNHLGHFLLTNLLL 120
            ASV+    E   +  ++++L+NNAG+   G     S    +  F TN  G   +T  +L
Sbjct: 57  DASVQAAVDEVIARAGRIDVLVNNAGVGLAGAAEESSIAQAQALFDTNVFGILRMTRAVL 116

Query: 121 DTMKKTARKSGGEGRIINVSS 141
             M+       G GRIIN+SS
Sbjct: 117 PHMRAQ-----GSGRIINISS 132

Length = 270

>gnl|CDD|183778 PRK12829, PRK12829, short chain dehydrogenase; Provisional

 Score = 73.6 bits (181), Expect = 1e-15
 Identities = 58/207 (28%), Positives = 80/207 (38%), Gaps = 28/207 (13%)

Query: 3   IVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSS 62
           +++TG  SGIG   A   A  G  V +     AA           +P AKV A   D++ 
Sbjct: 14  VLVTGGASGIGRAIAEAFAEAGARVHVCDVSEAA----LAATAARLPGAKVTATVADVAD 69

Query: 63  LASVRNFASEYNIQHHQLNILINNAGIMGTPFM---LSKDNIELQFATNHLGHFLLTNLL 119
            A V         +   L++L+NNAGI G       ++ +  E   A N  G F      
Sbjct: 70  PAQVERVFDTAVERFGGLDVLVNNAGIAGPTGGIDEITPEQWEQTLAVNLNGQFYFARAA 129

Query: 120 LDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANILH 179
           +  +K  A   GG   II +SS   RL               GY G   Y+ SK A +  
Sbjct: 130 VPLLK--ASGHGGV--IIALSSVAGRL---------------GYPGRTPYAASKWAVVGL 170

Query: 180 ANELARRLKEDGVDITANSVHPGAIAT 206
              LA  L   G  I  N++ PG +  
Sbjct: 171 VKSLAIELGPLG--IRVNAILPGIVRG 195

Length = 264

>gnl|CDD|182051 PRK09730, PRK09730, putative NAD(P)-binding oxidoreductase; Provisional

 Score = 73.0 bits (179), Expect = 2e-15
 Identities = 62/210 (29%), Positives = 91/210 (43%), Gaps = 26/210 (12%)

Query: 4   VITGATSGIGTETARVLALRGVHV-VMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSS 62
           ++TG + GIG  TA +LA  G  V V   +++ A ++V   I +     K   ++ D+S 
Sbjct: 5   LVTGGSRGIGRATALLLAQEGYTVAVNYQQNLHAAQEVVNLITQA--GGKAFVLQADISD 62

Query: 63  LASVRNFASEYNIQHHQLNILINNAGIMGTPFM---LSKDNIELQFATNHLGHFLLTNLL 119
              V    +  +     L  L+NNAGI+ T      L+ + I    +TN  G+FL     
Sbjct: 63  ENQVVAMFTAIDQHDEPLAALVNNAGILFTQCTVENLTAERINRVLSTNVTGYFLCCR-- 120

Query: 120 LDTMKKTARKSGGE-GRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANIL 178
            + +K+ A K GG  G I+NVSS   RL             P  Y     Y+ SK A   
Sbjct: 121 -EAVKRMALKHGGSGGAIVNVSSAASRLG-----------APGEYVD---YAASKGAIDT 165

Query: 179 HANELARRLKEDGVDITANSVHPGAIATNI 208
               L+  +   G  I  N V PG I T +
Sbjct: 166 LTTGLSLEVAAQG--IRVNCVRPGFIYTEM 193

Length = 247

>gnl|CDD|187602 cd05344, BKR_like_SDR_like, putative beta-ketoacyl acyl carrier protein [ACP] reductase (BKR)-like, SDR

 Score = 73.1 bits (180), Expect = 2e-15
 Identities = 56/205 (27%), Positives = 82/205 (40%), Gaps = 26/205 (12%)

Query: 4   VITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSL 63
           ++T A+SGIG   AR LA  G  V +  R+    +     +      A V A+  DL+  
Sbjct: 5   LVTAASSGIGLAIARALAREGARVAICARNRENLERAASEL--RAGGAGVLAVVADLTDP 62

Query: 64  ASVRNFASEYNIQHHQLNILINNAG--IMGTPFMLSKDNIELQFATNHLGHFLLTNLLLD 121
             +     +      +++IL+NNAG    G    L+ ++    F    L    +   +L 
Sbjct: 63  EDIDRLVEKAGDAFGRVDILVNNAGGPPPGPFAELTDEDWLEAFDLKLLSVIRIVRAVLP 122

Query: 122 TMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANILHAN 181
            MK+      G GRI+N+SS             +     S  N  RA        I    
Sbjct: 123 GMKER-----GWGRIVNISSLT-------VKEPEPNLVLS--NVARA------GLIGLVK 162

Query: 182 ELARRLKEDGVDITANSVHPGAIAT 206
            L+R L  DG  +T NSV PG I T
Sbjct: 163 TLSRELAPDG--VTVNSVLPGYIDT 185

This subgroup resembles the SDR family, but does not have a perfect match to the NAD-binding motif or the catalytic tetrad characteristic of the SDRs. It includes the SDRs, Q9HYA2 from Pseudomonas aeruginosa PAO1 and APE0912 from Aeropyrum pernix K1. BKR catalyzes the NADPH-dependent reduction of ACP in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of four elongation steps, which are repeated to extend the fatty acid chain through the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and a final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I FAS utilizes one or two multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 253

>gnl|CDD|187625 cd05367, SPR-like_SDR_c, sepiapterin reductase (SPR)-like, classical (c) SDRs

 Score = 72.7 bits (179), Expect = 2e-15
 Identities = 56/212 (26%), Positives = 89/212 (41%), Gaps = 33/212 (15%)

Query: 3   IVITGATSGIGTETARVLALRG-VHVVMGV-RDIAAGKDVKETIVKEIPSAKVDAMELDL 60
           I++TGA+ GIG   A  L  RG   VV+ + R       ++E   +  P  +V  ++ DL
Sbjct: 2   IILTGASRGIGRALAEELLKRGSPSVVVLLARSEE---PLQELKEELRPGLRVTTVKADL 58

Query: 61  SSLASVRNFASEYNIQHHQLNILINNAGIMGTPFM----LSKDNIELQFATNHLGHFLLT 116
           S  A V            + ++LINNAG +G P      +  D ++  F  N      LT
Sbjct: 59  SDAAGVEQLLEAIRKLDGERDLLINNAGSLG-PVSKIEFIDLDELQKYFDLNLTSPVCLT 117

Query: 117 NLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLAN 176
           + LL    +  +K G +  ++NVSS     A    +          + G+  Y  SK A 
Sbjct: 118 STLL----RAFKKRGLKKTVVNVSS----GA---AVN--------PFKGWGLYCSSKAA- 157

Query: 177 ILHANELARRLKEDGVDITANSVHPGAIATNI 208
               +   R L  +  D+   S  PG + T++
Sbjct: 158 ---RDMFFRVLAAEEPDVRVLSYAPGVVDTDM 186

Human SPR, a member of the SDR family, catalyzes the NADP-dependent reduction of sepiaptern to 7,8-dihydrobiopterin (BH2). In addition to SPRs, this subgroup also contains Bacillus cereus yueD, a benzil reductase, which catalyzes the stereospecific reduction of benzil to (S)-benzoin. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 241

>gnl|CDD|237220 PRK12828, PRK12828, short chain dehydrogenase; Provisional

 Score = 72.5 bits (178), Expect = 2e-15
 Identities = 52/210 (24%), Positives = 76/210 (36%), Gaps = 28/210 (13%)

Query: 3   IVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSS 62
           + ITG   G+G  TA  LA RG  V +    I  G       +  +P+  +    +DL  
Sbjct: 10  VAITGGFGGLGRATAAWLAARGARVAL----IGRGAAPLSQTLPGVPADALRIGGIDLVD 65

Query: 63  LASVRNFASEYNIQHHQLNILINNAGIM--GTPFMLSKDNIELQFATNHLGHFLLTNLLL 120
             + R    E N Q  +L+ L+N AG    GT      D  +  +  N       +   L
Sbjct: 66  PQAARRAVDEVNRQFGRLDALVNIAGAFVWGTIADGDADTWDRMYGVNVKTTLNASKAAL 125

Query: 121 DTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANILHA 180
             +  +     G GRI+N+ +                       G  AY+ +K       
Sbjct: 126 PALTAS-----GGGRIVNIGA---------------GAALKAGPGMGAYAAAKAGVARLT 165

Query: 181 NELARRLKEDGVDITANSVHPGAIATNIIR 210
             LA  L + G  IT N+V P  I T   R
Sbjct: 166 EALAAELLDRG--ITVNAVLPSIIDTPPNR 193

Length = 239

>gnl|CDD|187604 cd05346, SDR_c5, classical (c) SDR, subgroup 5

 Score = 72.7 bits (179), Expect = 2e-15
 Identities = 43/151 (28%), Positives = 71/151 (47%), Gaps = 9/151 (5%)

Query: 1   MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDL 60
             ++ITGA+SGIG  TAR  A  G  +++  R     +++ + +  + P  KV  ++LD+
Sbjct: 1   KTVLITGASSGIGEATARRFAKAGAKLILTGRRAERLQELADELGAKFP-VKVLPLQLDV 59

Query: 61  SSLASVRNFASEYNIQHHQLNILINNAGI-MGTP--FMLSKDNIELQFATNHLGHFLLTN 117
           S   S+         +   ++IL+NNAG+ +G         ++ E    TN  G   +T 
Sbjct: 60  SDRESIEAALENLPEEFRDIDILVNNAGLALGLDPAQEADLEDWETMIDTNVKGLLNVTR 119

Query: 118 LLLDTMKKTARKSGGEGRIINVSSEGHRLAY 148
           L+L  M         +G IIN+ S   R  Y
Sbjct: 120 LILPIMIAR-----NQGHIINLGSIAGRYPY 145

These proteins are members of the classical SDR family, with a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 249

>gnl|CDD|183773 PRK12824, PRK12824, acetoacetyl-CoA reductase; Provisional

 Score = 71.7 bits (176), Expect = 6e-15
 Identities = 59/213 (27%), Positives = 83/213 (38%), Gaps = 41/213 (19%)

Query: 4   VITGATSGIGTETARVLALRGVHVVMGVR-DIAAGKDVKETIVKEIPSAKVDAMELDLSS 62
           ++TGA  GIG+  AR L   G  V+          KD  E         +V   ELD++ 
Sbjct: 6   LVTGAKRGIGSAIARELLNDGYRVIATYFSGNDCAKDWFE--EYGFTEDQVRLKELDVTD 63

Query: 63  LASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQFA---------TNHLGHF 113
                   +E   +   ++IL+NNAGI       ++D++  + +         TN    F
Sbjct: 64  TEECAEALAEIEEEEGPVDILVNNAGI-------TRDSVFKRMSHQEWNDVINTNLNSVF 116

Query: 114 LLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSK 173
            +T  L   M +      G GRIIN+SS               +N   G  G   YS +K
Sbjct: 117 NVTQPLFAAMCEQ-----GYGRIINISS---------------VNGLKGQFGQTNYSAAK 156

Query: 174 LANILHANELARRLKEDGVDITANSVHPGAIAT 206
              I     LA      G  IT N + PG IAT
Sbjct: 157 AGMIGFTKALASEGARYG--ITVNCIAPGYIAT 187

Length = 245

>gnl|CDD|187635 cd08930, SDR_c8, classical (c) SDR, subgroup 8

 Score = 71.2 bits (175), Expect = 8e-15
 Identities = 56/221 (25%), Positives = 93/221 (42%), Gaps = 40/221 (18%)

Query: 3   IVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSS 62
           I+ITGA   IG    + L   G  +++   +  A + +KE +   +   +V A+ELD++S
Sbjct: 5   ILITGAAGLIGKAFCKALLSAGARLILADINAPALEQLKEEL-TNLYKNRVIALELDITS 63

Query: 63  LASVRNFASEYNIQHHQLNILINNAGI----MGTPFM-LSKDNIELQFATNHLGHFLLTN 117
             S++     Y  +  +++ILINNA       G+ F     +        N  G FL + 
Sbjct: 64  KESIKELIESYLEKFGRIDILINNAYPSPKVWGSRFEEFPYEQWNEVLNVNLGGAFLCSQ 123

Query: 118 LLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKL--- 174
             +   KK      G+G IIN++S               +  P     FR Y  +++   
Sbjct: 124 AFIKLFKKQ-----GKGSIINIAS------------IYGVIAPD----FRIYENTQMYSP 162

Query: 175 -------ANILHANE-LARRLKEDGVDITANSVHPGAIATN 207
                  A I+H  + LA+   + G  I  N++ PG I  N
Sbjct: 163 VEYSVIKAGIIHLTKYLAKYYADTG--IRVNAISPGGILNN 201

This subgroup has a fairly well conserved active site tetrad and domain size of the classical SDRs, but has an atypical NAD-binding motif ([ST]G[GA]XGXXG). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250

>gnl|CDD|180343 PRK05993, PRK05993, short chain dehydrogenase; Provisional

 Score = 71.2 bits (175), Expect = 1e-14
 Identities = 61/216 (28%), Positives = 90/216 (41%), Gaps = 36/216 (16%)

Query: 3   IVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSS 62
           I+ITG +SGIG   AR L   G  V    R        KE  V  + +  ++A +LD + 
Sbjct: 7   ILITGCSSGIGAYCARALQSDGWRVFATCR--------KEEDVAALEAEGLEAFQLDYAE 58

Query: 63  LASVRNFASE-YNIQHHQLNILINNAGIMGTPFM---LSKDNIELQFATNHLGHFLLTNL 118
             S+    ++   +   +L+ L NN G  G P     L  + +  QF  N  G   LT  
Sbjct: 59  PESIAALVAQVLELSGGRLDALFNN-GAYGQPGAVEDLPTEALRAQFEANFFGWHDLTRR 117

Query: 119 LLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANIL 178
           ++  M+K      G+GRI+  SS    +                Y G  AY+ SK A  +
Sbjct: 118 VIPVMRKQ-----GQGRIVQCSSILGLVPMK-------------YRG--AYNASKFA--I 155

Query: 179 HANELARRLKEDGVDITANSVHPGAIATNIIRHNSL 214
               L  R++  G  I  + + PG I T   R N+L
Sbjct: 156 EGLSLTLRMELQGSGIHVSLIEPGPIETR-FRANAL 190

Length = 277

>gnl|CDD|131680 TIGR02632, RhaD_aldol-ADH, rhamnulose-1-phosphate aldolase/alcohol dehydrogenase

 Score = 72.2 bits (177), Expect = 2e-14
 Identities = 52/204 (25%), Positives = 89/204 (43%), Gaps = 23/204 (11%)

Query: 3   IVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSS 62
             +TG   GIG ETAR LA  G HVV+   ++ A + V   I  +  + +  A+++D++ 
Sbjct: 417 AFVTGGAGGIGRETARRLAAEGAHVVLADLNLEAAEAVAAEINGQFGAGRAVALKMDVTD 476

Query: 63  LASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIE--LQFATNHLGHFLLTNLLL 120
             +V+   ++  + +  ++I++NNAGI  +         E  L       G+FL+     
Sbjct: 477 EQAVKAAFADVALAYGGVDIVVNNAGIATSSPFEETTLQEWQLNLDILATGYFLVAREAF 536

Query: 121 DTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANILHA 180
             M    R+ G  G I+ ++S+    A                    AYS +K A    A
Sbjct: 537 RQM----REQGLGGNIVFIASKNAVYAGKNAS---------------AYSAAKAAEAHLA 577

Query: 181 NELARRLKEDGVDITANSVHPGAI 204
             LA      G+ +  N+V+P A+
Sbjct: 578 RCLAAEGGTYGIRV--NTVNPDAV 599

Length = 676

>gnl|CDD|235628 PRK05855, PRK05855, short chain dehydrogenase; Validated

 Score = 71.9 bits (177), Expect = 2e-14
 Identities = 65/215 (30%), Positives = 92/215 (42%), Gaps = 33/215 (15%)

Query: 3   IVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSS 62
           +V+TGA SGIG ETA   A  G  VV    D AA +   E I      A   A  +D+S 
Sbjct: 318 VVVTGAGSGIGRETALAFAREGAEVVASDIDEAAAERTAELI--RAAGAVAHAYRVDVSD 375

Query: 63  LASVRNFASEYNIQHHQLNILINNAGI-MGTPFMLSKDNIELQFATNHLGHFLLTNL--L 119
             ++  FA     +H   +I++NNAGI M   F        L  +       L  NL  +
Sbjct: 376 ADAMEAFAEWVRAEHGVPDIVVNNAGIGMAGGF--------LDTSAEDWDRVLDVNLWGV 427

Query: 120 LDTMKKTARK---SGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLAN 176
           +   +   R+    G  G I+NV+S     AY           PS      AY+ SK A 
Sbjct: 428 IHGCRLFGRQMVERGTGGHIVNVASAA---AY----------APS--RSLPAYATSKAAV 472

Query: 177 ILHANELARRLKEDGVDITANSVHPGAIATNIIRH 211
           ++ +  L   L   G+ +TA  + PG + TNI+  
Sbjct: 473 LMLSECLRAELAAAGIGVTA--ICPGFVDTNIVAT 505

Length = 582

>gnl|CDD|187600 cd05341, 3beta-17beta-HSD_like_SDR_c, 3beta17beta hydroxysteroid dehydrogenase-like, classical (c) SDRs

 Score = 69.7 bits (171), Expect = 3e-14
 Identities = 58/208 (27%), Positives = 82/208 (39%), Gaps = 31/208 (14%)

Query: 3   IVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAM--ELDL 60
            ++TG   G+G   AR+L   G  VV+       G+        E+  A   A    LD+
Sbjct: 8   AIVTGGARGLGLAHARLLVAEGAKVVLSDILDEEGQ----AAAAELGDA---ARFFHLDV 60

Query: 61  SSLASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQ--FATNHLGHFLLTNL 118
           +                 +L++L+NNAGI+    + +    E +     N  G FL T  
Sbjct: 61  TDEDGWTAVVDTAREAFGRLDVLVNNAGILTGGTVETTTLEEWRRLLDINLTGVFLGTRA 120

Query: 119 LLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANIL 178
           ++  MK+      G G IIN+SS        EG+    + DP       AY+ SK A   
Sbjct: 121 VIPPMKEA-----GGGSIINMSSI-------EGL----VGDP----ALAAYNASKGAVRG 160

Query: 179 HANELARRLKEDGVDITANSVHPGAIAT 206
                A      G  I  NSVHPG I T
Sbjct: 161 LTKSAALECATQGYGIRVNSVHPGYIYT 188

This subgroup includes members identified as 3beta17beta hydroxysteroid dehydrogenase, 20beta hydroxysteroid dehydrogenase, and R-alcohol dehydrogenase. These proteins exhibit the canonical active site tetrad and glycine rich NAD(P)-binding motif of the classical SDRs. 17beta-dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens, and include members of the SDR family. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 247

>gnl|CDD|181762 PRK09291, PRK09291, short chain dehydrogenase; Provisional

 Score = 69.6 bits (171), Expect = 3e-14
 Identities = 56/214 (26%), Positives = 87/214 (40%), Gaps = 48/214 (22%)

Query: 3   IVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSS 62
           I+ITGA SG G E A  LA +G +V+ GV+           I  ++ + + +A    L+ 
Sbjct: 5   ILITGAGSGFGREVALRLARKGHNVIAGVQ-----------IAPQVTALRAEAARRGLAL 53

Query: 63  LASVRNFASEYNIQH---HQLNILINNAGIM--GTPFMLSKDNIELQFATNHLGHFLLTN 117
                +     +        +++L+NNAGI   G    +  + +   F TN  G   LT 
Sbjct: 54  RVEKLDLTDAIDRAQAAEWDVDVLLNNAGIGEAGAVVDIPVELVRELFETNVFGPLELTQ 113

Query: 118 LLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANI 177
             +  M   AR     G+++  SS         G+    I  P  + G  AY  SK    
Sbjct: 114 GFVRKM--VARGK---GKVVFTSSMA-------GL----ITGP--FTG--AYCASK---- 149

Query: 178 LHANE-----LARRLKEDGVDITANSVHPGAIAT 206
            HA E     +   LK  G+ +   +V+PG   T
Sbjct: 150 -HALEAIAEAMHAELKPFGIQVA--TVNPGPYLT 180

Length = 257

>gnl|CDD|235631 PRK05866, PRK05866, short chain dehydrogenase; Provisional

 Score = 70.2 bits (172), Expect = 3e-14
 Identities = 49/147 (33%), Positives = 71/147 (48%), Gaps = 15/147 (10%)

Query: 3   IVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMEL--DL 60
           I++TGA+SGIG   A   A RG  VV     +A  +D+ + +   I  A  DAM +  DL
Sbjct: 43  ILLTGASSGIGEAAAEQFARRGATVVA----VARREDLLDAVADRITRAGGDAMAVPCDL 98

Query: 61  SSLASVRNFASEYNIQHHQLNILINNAG-IMGTPFMLSKD---NIELQFATNHLGHFLLT 116
           S L +V    ++   +   ++ILINNAG  +  P   S D   ++E     N+     L 
Sbjct: 99  SDLDAVDALVADVEKRIGGVDILINNAGRSIRRPLAESLDRWHDVERTMVLNYYAPLRLI 158

Query: 117 NLLLDTMKKTARKSGGEGRIINVSSEG 143
             L   M    R   G+G IINV++ G
Sbjct: 159 RGLAPGM--LER---GDGHIINVATWG 180

Length = 293

>gnl|CDD|180773 PRK06949, PRK06949, short chain dehydrogenase; Provisional

 Score = 68.3 bits (167), Expect = 1e-13
 Identities = 59/213 (27%), Positives = 98/213 (46%), Gaps = 26/213 (12%)

Query: 5   ITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLA 64
           +TGA+SG+G   A+VLA  G  VV+  R +   K+++  I  E  +A V  + LD++   
Sbjct: 14  VTGASSGLGARFAQVLAQAGAKVVLASRRVERLKELRAEIEAEGGAAHV--VSLDVTDYQ 71

Query: 65  SVRNFASEYNIQHHQLNILINNAGIMGTPFML--SKDNIELQFATNHLGHFLLTNLLLDT 122
           S++   +    +   ++IL+NN+G+  T  ++  +  + +  F TN  G F +   +   
Sbjct: 72  SIKAAVAHAETEAGTIDILVNNSGVSTTQKLVDVTPADFDFVFDTNTRGAFFVAQEVAKR 131

Query: 123 MKKTARKSGG---EGRIINVSSEGHRLAYHEGIR-FDKINDPSGYNGFRAYSQSKLANIL 178
           M   A+ +G     GRIIN++S         G+R   +I           Y  SK A + 
Sbjct: 132 MIARAKGAGNTKPGGRIINIASVA-------GLRVLPQIG---------LYCMSKAAVVH 175

Query: 179 HANELARRLKEDGVDITANSVHPGAIATNIIRH 211
               +A      G  I  N++ PG I T I  H
Sbjct: 176 MTRAMALEWGRHG--INVNAICPGYIDTEINHH 206

Length = 258

>gnl|CDD|180448 PRK06182, PRK06182, short chain dehydrogenase; Validated

 Score = 68.4 bits (168), Expect = 1e-13
 Identities = 48/155 (30%), Positives = 72/155 (46%), Gaps = 21/155 (13%)

Query: 3   IVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSS 62
            ++TGA+SGIG  TAR LA +G  V    R +   +D+         S  V  + LD++ 
Sbjct: 6   ALVTGASSGIGKATARRLAAQGYTVYGAARRVDKMEDLA--------SLGVHPLSLDVTD 57

Query: 63  LASVRNFASEYNIQHHQLNILINNAG--IMGTPFMLSKDNIELQFATNHLGHFLLTNLLL 120
            AS++        +  ++++L+NNAG    G    +  D    QF  N  G   LT L+L
Sbjct: 58  EASIKAAVDTIIAEEGRIDVLVNNAGYGSYGAIEDVPIDEARRQFEVNLFGAARLTQLVL 117

Query: 121 DTMKKTARKSGGEGRIINVSSEGHRLA------YH 149
             M+         GRIIN+SS G ++       YH
Sbjct: 118 PHMRAQ-----RSGRIINISSMGGKIYTPLGAWYH 147

Length = 273

>gnl|CDD|237187 PRK12743, PRK12743, oxidoreductase; Provisional

 Score = 68.1 bits (167), Expect = 1e-13
 Identities = 64/214 (29%), Positives = 95/214 (44%), Gaps = 42/214 (19%)

Query: 4   VITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPS--AKVDAMELDLS 61
           ++T + SGIG   A +LA +G  +  G+   +  +  KET  +E+ S   + +  +LDLS
Sbjct: 6   IVTASDSGIGKACALLLAQQGFDI--GITWHSDEEGAKET-AEEVRSHGVRAEIRQLDLS 62

Query: 62  SL----ASVRNFASEYNIQHHQLNILINNAGIM-GTPFM-LSKDNIELQFATNHLGHFLL 115
            L     ++            ++++L+NNAG M   PF+ +  D     F  +  G FL 
Sbjct: 63  DLPEGAQALDKLIQRLG----RIDVLVNNAGAMTKAPFLDMDFDEWRKIFTVDVDGAFLC 118

Query: 116 TNLLLDTMKKTAR---KSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQS 172
                   +  AR   K G  GRIIN++S       HE         P    G  AY+ +
Sbjct: 119 -------SQIAARHMVKQGQGGRIINITS------VHEHT-------PL--PGASAYTAA 156

Query: 173 KLANILHANELARRLKEDGVDITANSVHPGAIAT 206
           K A       +A  L E G  I  N+V PGAIAT
Sbjct: 157 KHALGGLTKAMALELVEHG--ILVNAVAPGAIAT 188

Length = 256

>gnl|CDD|237219 PRK12827, PRK12827, short chain dehydrogenase; Provisional

 Score = 67.8 bits (166), Expect = 1e-13
 Identities = 60/211 (28%), Positives = 87/211 (41%), Gaps = 25/211 (11%)

Query: 5   ITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSA--KVDAMELDLSS 62
           ITG + G+G   A  LA  G  V++       G+   + +   I +A  K   +  D+  
Sbjct: 11  ITGGSGGLGRAIAVRLAADGADVIVLDIHPMRGRAEADAVAAGIEAAGGKALGLAFDVRD 70

Query: 63  LASVRNFASEYNIQHHQLNILINNAGIM-GTPFM-LSKDNIELQFATNHLGHFLLTNLLL 120
            A+ R        +  +L+IL+NNAGI     F  LS +  +     N  G F +T   L
Sbjct: 71  FAATRAALDAGVEEFGRLDILVNNAGIATDAAFAELSIEEWDDVIDVNLDGFFNVTQAAL 130

Query: 121 DTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANILHA 180
             M +        GRI+N++S         G+R        G  G   Y+ SK   I   
Sbjct: 131 PPMIRA----RRGGRIVNIASVA-------GVR--------GNRGQVNYAASKAGLIGLT 171

Query: 181 NELARRLKEDGVDITANSVHPGAIATNIIRH 211
             LA  L   G  IT N+V PGAI T +  +
Sbjct: 172 KTLANELAPRG--ITVNAVAPGAINTPMADN 200

Length = 249

>gnl|CDD|226476 COG3967, DltE, Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]

 Score = 67.1 bits (164), Expect = 2e-13
 Identities = 47/145 (32%), Positives = 64/145 (44%), Gaps = 19/145 (13%)

Query: 3   IVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSS 62
           I+ITG  SGIG   A+     G  V++  R+     + K     E P   +     D++ 
Sbjct: 8   ILITGGASGIGLALAKRFLELGNTVIICGRNEERLAEAK----AENPE--IHTEVCDVAD 61

Query: 63  LASVRNFASEYNIQHHQLNILINNAGIM------GTPFMLSKDNIELQFATNHLGHFLLT 116
             S R        ++  LN+LINNAGI       G   +L  D+ E + ATN L    LT
Sbjct: 62  RDSRRELVEWLKKEYPNLNVLINNAGIQRNEDLTGAEDLL--DDAEQEIATNLLAPIRLT 119

Query: 117 NLLLDTMKKTARKSGGEGRIINVSS 141
            LLL  + +       E  IINVSS
Sbjct: 120 ALLLPHLLRQP-----EATIINVSS 139

Length = 245

>gnl|CDD|235962 PRK07201, PRK07201, short chain dehydrogenase; Provisional

 Score = 68.8 bits (169), Expect = 2e-13
 Identities = 48/148 (32%), Positives = 71/148 (47%), Gaps = 17/148 (11%)

Query: 3   IVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSA--KVDAMELDL 60
           ++ITGA+SGIG  TA  +A  G  V +  R+   G+ + E  V EI +      A   DL
Sbjct: 374 VLITGASSGIGRATAIKVAEAGATVFLVARN---GEALDEL-VAEIRAKGGTAHAYTCDL 429

Query: 61  SSLASVRNFASEYNIQHHQLNILINNAG--IMGTPFMLSKD---NIELQFATNHLGHFLL 115
           +  A+V +   +   +H  ++ L+NNAG  I  +    S D   + E   A N+ G   L
Sbjct: 430 TDSAAVDHTVKDILAEHGHVDYLVNNAGRSIRRS-VENSTDRFHDYERTMAVNYFGAVRL 488

Query: 116 TNLLLDTMKKTARKSGGEGRIINVSSEG 143
              LL  M    R+    G ++NVSS G
Sbjct: 489 ILGLLPHM--RERRF---GHVVNVSSIG 511

Length = 657

>gnl|CDD|171821 PRK12937, PRK12937, short chain dehydrogenase; Provisional

 Score = 66.7 bits (163), Expect = 4e-13
 Identities = 60/212 (28%), Positives = 99/212 (46%), Gaps = 37/212 (17%)

Query: 4   VITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSA--KVDAMELDLS 61
           ++TGA+ GIG   AR LA  G  V +     A      + +V EI +A  +  A++ D++
Sbjct: 9   IVTGASRGIGAAIARRLAADGFAVAVNY---AGSAAAADELVAEIEAAGGRAIAVQADVA 65

Query: 62  SLASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQ-----FATNHLGHFLLT 116
             A+V            ++++L+NNAG+M    + +  + +L+      ATN  G F+  
Sbjct: 66  DAAAVTRLFDAAETAFGRIDVLVNNAGVM---PLGTIADFDLEDFDRTIATNLRGAFV-- 120

Query: 117 NLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLAN 176
                 +++ AR  G  GRIIN+S+    L             P    G  A S++ +  
Sbjct: 121 -----VLREAARHLGQGGRIINLSTSVIALPL-----------PGY--GPYAASKAAVEG 162

Query: 177 ILHANELARRLKEDGVDITANSVHPGAIATNI 208
           ++H   LA  L+  G  IT N+V PG +AT +
Sbjct: 163 LVHV--LANELR--GRGITVNAVAPGPVATEL 190

Length = 245

>gnl|CDD|181335 PRK08264, PRK08264, short chain dehydrogenase; Validated

 Score = 66.5 bits (163), Expect = 4e-13
 Identities = 60/225 (26%), Positives = 83/225 (36%), Gaps = 54/225 (24%)

Query: 1   MDI-----VITGATSGIGTETARVLALRGVH-VVMGVRDIAAGKDVKETIVKEIPSAKVD 54
           MDI     ++TGA  GIG      L  RG   V    RD  +  D+           +V 
Sbjct: 2   MDIKGKVVLVTGANRGIGRAFVEQLLARGAAKVYAAARDPESVTDL---------GPRVV 52

Query: 55  AMELDLSSLASVRNFASEYNIQHHQLNILINNAGIM-GTPFMLSK--DNIELQFATNHLG 111
            ++LD++  ASV   A         + IL+NNAGI      +L    D +  +  TN+ G
Sbjct: 53  PLQLDVTDPASVAAAAE----AASDVTILVNNAGIFRTGSLLLEGDEDALRAEMETNYFG 108

Query: 112 HFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQ 171
              +       +      +GG G I+NV S    +           N P        YS 
Sbjct: 109 PLAMARAFAPVLA----ANGG-GAIVNVLSVLSWV-----------NFP----NLGTYSA 148

Query: 172 SKLA-----NILHANELARRLKEDGVDITANSVHPGAIATNIIRH 211
           SK A       L A ELA +            VHPG I T++   
Sbjct: 149 SKAAAWSLTQALRA-ELAPQ------GTRVLGVHPGPIDTDMAAG 186

Length = 238

>gnl|CDD|236241 PRK08324, PRK08324, short chain dehydrogenase; Validated

 Score = 67.9 bits (167), Expect = 4e-13
 Identities = 52/209 (24%), Positives = 84/209 (40%), Gaps = 36/209 (17%)

Query: 3   IVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSS 62
            ++TGA  GIG  TA+ LA  G  VV+   D  A +     +       +   +  D++ 
Sbjct: 425 ALVTGAAGGIGKATAKRLAAEGACVVLADLDEEAAEAAAAELG---GPDRALGVACDVTD 481

Query: 63  LASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIE-------LQFATNHLGHFLL 115
            A+V+    E  +    ++I+++NAGI      +S    E         F  N  GHF  
Sbjct: 482 EAAVQAAFEEAALAFGGVDIVVSNAGI-----AISGPIEETSDEDWRRSFDVNATGHF-- 534

Query: 116 TNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLA 175
             L+     +  +  G  G I+ ++S+               N  +    F AY  +K A
Sbjct: 535 --LVAREAVRIMKAQGLGGSIVFIASK---------------NAVNPGPNFGAYGAAKAA 577

Query: 176 NILHANELARRLKEDGVDITANSVHPGAI 204
            +    +LA  L  DG  I  N V+P A+
Sbjct: 578 ELHLVRQLALELGPDG--IRVNGVNPDAV 604

Length = 681

>gnl|CDD|187647 cd08943, R1PA_ADH_SDR_c, rhamnulose-1-phosphate aldolase/alcohol dehydrogenase, classical (c) SDRs

 Score = 66.3 bits (162), Expect = 5e-13
 Identities = 56/203 (27%), Positives = 87/203 (42%), Gaps = 26/203 (12%)

Query: 4   VITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSL 63
           ++TG  SGIG   A+ LA  G  VV+   D    + V E         +   ++ D++S 
Sbjct: 5   LVTGGASGIGLAIAKRLAAEGAAVVVADIDPEIAEKVAE---AAQGGPRALGVQCDVTSE 61

Query: 64  ASVRNFASEYNIQHHQLNILINNAGIMGT-PFM-LSKDNIELQFATNHLGHFLLTNLLLD 121
           A V++   +  ++   L+I+++NAGI  + P    S ++       N  GHFL++     
Sbjct: 62  AQVQSAFEQAVLEFGGLDIVVSNAGIATSSPIAETSLEDWNRSMDINLTGHFLVSREAFR 121

Query: 122 TMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANILHAN 181
            MK      G  G I+  +S+    A   G                AYS +K A    A 
Sbjct: 122 IMK----SQGIGGNIVFNASKN---AVAPGP------------NAAAYSAAKAAEAHLAR 162

Query: 182 ELARRLKEDGVDITANSVHPGAI 204
            LA    EDG  I  N+V+P A+
Sbjct: 163 CLALEGGEDG--IRVNTVNPDAV 183

This family has bifunctional proteins with an N-terminal aldolase and a C-terminal classical SDR domain. One member is identified as a rhamnulose-1-phosphate aldolase/alcohol dehydrogenase. The SDR domain has a canonical SDR glycine-rich NAD(P) binding motif and a match to the characteristic active site triad. However, it lacks an upstream active site Asn typical of SDRs. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250

>gnl|CDD|187618 cd05360, SDR_c3, classical (c) SDR, subgroup 3

 Score = 65.9 bits (161), Expect = 6e-13
 Identities = 58/212 (27%), Positives = 85/212 (40%), Gaps = 36/212 (16%)

Query: 3   IVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSS 62
           +VITGA+SGIG  TA   A RG  VV+  R   A  ++   +       +  A+  D++ 
Sbjct: 3   VVITGASSGIGRATALAFAERGAKVVLAARSAEALHELAREV--RELGGEAIAVVADVAD 60

Query: 63  LASVRNFASEYNIQHHQLNILINNAG--IMGTPFMLSKDNIELQFATNHLGHFLLTNLLL 120
            A V   A     +  +++  +NNAG  + G    ++ +     F  N+LGH   T   L
Sbjct: 61  AAQVERAADTAVERFGRIDTWVNNAGVAVFGRFEDVTPEEFRRVFDVNYLGHVYGTLAAL 120

Query: 121 DTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFR------AYSQSKL 174
             +++      G G +INV S                       G+R      AYS SK 
Sbjct: 121 PHLRR-----RGGGALINVGSLL---------------------GYRSAPLQAAYSASKH 154

Query: 175 ANILHANELARRLKEDGVDITANSVHPGAIAT 206
           A       L   L  DG  I+   V P A+ T
Sbjct: 155 AVRGFTESLRAELAHDGAPISVTLVQPTAMNT 186

These proteins are members of the classical SDR family, with a canonical active site triad (and also active site Asn) and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 233

>gnl|CDD|187617 cd05359, ChcA_like_SDR_c, 1-cyclohexenylcarbonyl_coenzyme A_reductase (ChcA)_like, classical (c) SDRs

 Score = 65.8 bits (161), Expect = 8e-13
 Identities = 53/211 (25%), Positives = 80/211 (37%), Gaps = 29/211 (13%)

Query: 5   ITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMEL--DLSS 62
           +TG + GIG   A  LA RG  VV+  R     KD    +  EI      A+ +  D+S 
Sbjct: 3   VTGGSRGIGKAIALRLAERGADVVINYRK---SKDAAAEVAAEIEELGGKAVVVRADVSQ 59

Query: 63  LASVRNFASEYNIQHHQLNILINNAGIMG-TPFM-LSKDNIELQFATNHLGHFLLTNLLL 120
              V    +    +  +L++L++NA      P   L+  + + +  TN            
Sbjct: 60  PQDVEEMFAAVKERFGRLDVLVSNAAAGAFRPLSELTPAHWDAKMNTNLKALVHCAQQAA 119

Query: 121 DTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANILHA 180
             M++      G GRI+ +SS G   A                  + A   +K A     
Sbjct: 120 KLMRER-----GGGRIVAISSLGSIRALP---------------NYLAVGTAKAALEALV 159

Query: 181 NELARRLKEDGVDITANSVHPGAIATNIIRH 211
             LA  L   G  I  N+V PG I T+ + H
Sbjct: 160 RYLAVELGPRG--IRVNAVSPGVIDTDALAH 188

This subgroup contains classical SDR proteins, including members identified as 1-cyclohexenylcarbonyl coenzyme A reductase. ChcA of Streptomyces collinus is implicated in the final reduction step of shikimic acid to ansatrienin. ChcA shows sequence similarity to the SDR family of NAD-binding proteins, but it lacks the conserved Tyr of the characteristic catalytic site. This subgroup also contains the NADH-dependent enoyl-[acyl-carrier-protein(ACP)] reductase FabL from Bacillus subtilis. This enzyme participates in bacterial fatty acid synthesis, in type II fatty-acid synthases and catalyzes the last step in each elongation cycle. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 242

>gnl|CDD|180771 PRK06947, PRK06947, glucose-1-dehydrogenase; Provisional

 Score = 65.2 bits (159), Expect = 1e-12
 Identities = 63/212 (29%), Positives = 94/212 (44%), Gaps = 28/212 (13%)

Query: 3   IVITGATSGIGTETARVLALRGVHV-VMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLS 61
           ++ITGA+ GIG  TA + A RG  V +   RD AA ++  + +       +   +  D++
Sbjct: 5   VLITGASRGIGRATAVLAAARGWSVGINYARDAAAAEETADAV--RAAGGRACVVAGDVA 62

Query: 62  SLASVRNFASEYNIQHHQLNILINNAGIMGTPFM----LSKDNIELQFATNHLGHFLLTN 117
           + A V            +L+ L+NNAGI+  P M    +    +   F TN LG +L   
Sbjct: 63  NEADVIAMFDAVQSAFGRLDALVNNAGIVA-PSMPLADMDAARLRRMFDTNVLGAYLCAR 121

Query: 118 LLLDTMKKTARKSGGE-GRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLAN 176
              +  ++ +   GG  G I+NVSS   RL             P   N +  Y+ SK A 
Sbjct: 122 ---EAARRLSTDRGGRGGAIVNVSSIASRLG-----------SP---NEYVDYAGSKGAV 164

Query: 177 ILHANELARRLKEDGVDITANSVHPGAIATNI 208
                 LA+ L   GV +  N+V PG I T I
Sbjct: 165 DTLTLGLAKELGPHGVRV--NAVRPGLIETEI 194

Length = 248

>gnl|CDD|187608 cd05350, SDR_c6, classical (c) SDR, subgroup 6

 Score = 64.7 bits (158), Expect = 2e-12
 Identities = 55/212 (25%), Positives = 88/212 (41%), Gaps = 38/212 (17%)

Query: 3   IVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEI--PSAKVDAMELDL 60
           ++ITGA+SGIG   AR  A  G +V +  R      D  + +  E+  P+  V+   LD+
Sbjct: 1   VLITGASSGIGRALAREFAKAGYNVALAARR----TDRLDELKAELLNPNPSVEVEILDV 56

Query: 61  SSLASVRNFASEYNIQHHQLNILINNAGI-MGTPF--MLSKDNIELQFATNHLGHFLLTN 117
           +     +   +E   +   L+++I NAG+  GT    +  K   E    TN LG   +  
Sbjct: 57  TDEERNQLVIAELEAELGGLDLVIINAGVGKGTSLGDLSFKAFRET-IDTNLLGAAAILE 115

Query: 118 LLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFR---AYSQSKL 174
             L   +  A+  G    ++ +SS                   +   G     AYS SK 
Sbjct: 116 AALPQFR--AKGRGH---LVLISS------------------VAALRGLPGAAAYSASKA 152

Query: 175 ANILHANELARRLKEDGVDITANSVHPGAIAT 206
           A    A  L   +K+ G+ +T   ++PG I T
Sbjct: 153 ALSSLAESLRYDVKKRGIRVT--VINPGFIDT 182

These proteins are members of the classical SDR family, with a canonical active site tetrad and a fairly well conserved typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 239

>gnl|CDD|187612 cd05354, SDR_c7, classical (c) SDR, subgroup 7

 Score = 64.7 bits (158), Expect = 2e-12
 Identities = 51/208 (24%), Positives = 80/208 (38%), Gaps = 35/208 (16%)

Query: 3   IVITGATSGIGTETARVLALRGV-HVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLS 61
           +++TGA  GIG      L   G   V   VRD  +       +V +    KV  + LD++
Sbjct: 6   VLVTGANRGIGKAFVESLLAHGAKKVYAAVRDPGSAAH----LVAKYGD-KVVPLRLDVT 60

Query: 62  SLASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIE---LQFATNHLGHFLLTNL 118
              S++  A+    Q   ++++INNAG++    +L +  +E    +   N  G   L   
Sbjct: 61  DPESIKAAAA----QAKDVDVVINNAGVLKPATLLEEGALEALKQEMDVNVFGLLRLAQA 116

Query: 119 LLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANIL 178
               +K       G G I+N++S               +     +     YS SK A   
Sbjct: 117 FAPVLKAN-----GGGAIVNLNS---------------VASLKNFPAMGTYSASKSAAYS 156

Query: 179 HANELARRLKEDGVDITANSVHPGAIAT 206
               L   L   G  +   SVHPG I T
Sbjct: 157 LTQGLRAELAAQGTLVL--SVHPGPIDT 182

These proteins are members of the classical SDR family, with a canonical active site triad (and also an active site Asn) and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 235

>gnl|CDD|187624 cd05366, meso-BDH-like_SDR_c, meso-2,3-butanediol dehydrogenase-like, classical (c) SDRs

 Score = 64.7 bits (158), Expect = 2e-12
 Identities = 63/233 (27%), Positives = 98/233 (42%), Gaps = 39/233 (16%)

Query: 4   VITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAM--ELDLS 61
           +ITGA  GIG   A  LA  G ++V  + D+   +  K TI +EI  A  +A+    D++
Sbjct: 6   IITGAAQGIGRAIAERLAADGFNIV--LADLNLEEAAKSTI-QEISEAGYNAVAVGADVT 62

Query: 62  SLASVRNFASEYNIQHHQLNILINNAGIMG-TPFM-LSKDNIELQFATNHLGHFLLTNLL 119
               V     +   +    ++++NNAGI   TP + +++++++  +A N  G        
Sbjct: 63  DKDDVEALIDQAVEKFGSFDVMVNNAGIAPITPLLTITEEDLKKVYAVNVFGVLFGIQAA 122

Query: 120 LDTMKKTARKSGGEGRIINVSS-EGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANIL 178
               KK     G  G+IIN SS  G +                G+    AYS SK A   
Sbjct: 123 ARQFKKL----GHGGKIINASSIAGVQ----------------GFPNLGAYSASKFAVRG 162

Query: 179 HANELARRLKEDGVDITANSVHPGAIATNIIRHNSLFRSMNTILHALPGIAGK 231
                A+ L   G  IT N+  PG + T +          + I   +  IAGK
Sbjct: 163 LTQTAAQELAPKG--ITVNAYAPGIVKTEM---------WDYIDEEVGEIAGK 204

2,3-butanediol dehydrogenases (BDHs) catalyze the NAD+ dependent conversion of 2,3-butanediol to acetonin; BDHs are classified into types according to their stereospecificity as to substrates and products. Included in this subgroup are Klebsiella pneumonia meso-BDH which catalyzes meso-2,3-butanediol to D(-)-acetonin, and Corynebacterium glutamicum L-BDH which catalyzes lX+)-2,3-butanediol to L(+)-acetonin. This subgroup is comprised of classical SDRs with the characteristic catalytic triad and NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257

>gnl|CDD|235726 PRK06181, PRK06181, short chain dehydrogenase; Provisional

 Score = 64.2 bits (157), Expect = 3e-12
 Identities = 59/212 (27%), Positives = 94/212 (44%), Gaps = 34/212 (16%)

Query: 3   IVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMEL--DL 60
           ++ITGA+ GIG   A  LA  G  +V+  R+         ++ +E+     +A+ +  D+
Sbjct: 4   VIITGASEGIGRALAVRLARAGAQLVLAARNETR----LASLAQELADHGGEALVVPTDV 59

Query: 61  SSLASVRNFASEYNIQHH-QLNILINNAGI-MGTPFMLSKDNIELQ--FATNHLGHFLLT 116
           S   +      E  +     ++IL+NNAGI M + F    D    +     N+LG    T
Sbjct: 60  SDAEACER-LIEAAVARFGGIDILVNNAGITMWSRFDELTDLSVFERVMRVNYLGAVYCT 118

Query: 117 NLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLAN 176
           +  L  +K +       G+I+ VSS    LA   G+        +G      Y+ SK A 
Sbjct: 119 HAALPHLKAS------RGQIVVVSS----LA---GL--------TGVPTRSGYAASKHAL 157

Query: 177 ILHANELARRLKEDGVDITANSVHPGAIATNI 208
               + L   L +DGV +T   V PG +AT+I
Sbjct: 158 HGFFDSLRIELADDGVAVTV--VCPGFVATDI 187

Length = 263

>gnl|CDD|235924 PRK07063, PRK07063, short chain dehydrogenase; Provisional

 Score = 63.5 bits (155), Expect = 5e-12
 Identities = 40/141 (28%), Positives = 65/141 (46%), Gaps = 7/141 (4%)

Query: 3   IVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSS 62
            ++TGA  GIG   AR  A  G  V +   D A  +     I +++  A+V A+  D++ 
Sbjct: 10  ALVTGAAQGIGAAIARAFAREGAAVALADLDAALAERAAAAIARDVAGARVLAVPADVTD 69

Query: 63  LASVRNFASEYNIQHHQLNILINNAGI--MGTPFMLSKDNIELQFATNHLGHFLLTNLLL 120
            ASV    +        L++L+NNAGI     P  ++ ++    FA +  G +     +L
Sbjct: 70  AASVAAAVAAAEEAFGPLDVLVNNAGINVFADPLAMTDEDWRRCFAVDLDGAWNGCRAVL 129

Query: 121 DTMKKTARKSGGEGRIINVSS 141
             M    R   G G I+N++S
Sbjct: 130 PGM--VER---GRGSIVNIAS 145

Length = 260

>gnl|CDD|211705 TIGR01963, PHB_DH, 3-hydroxybutyrate dehydrogenase

 Score = 63.5 bits (155), Expect = 6e-12
 Identities = 56/215 (26%), Positives = 80/215 (37%), Gaps = 36/215 (16%)

Query: 3   IVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSS 62
            ++TGA SGIG   AR LA  G +VV  V D           V       V  +  D++ 
Sbjct: 4   ALVTGAASGIGLAIARALAAAGANVV--VNDFGEEGAEAAAKVAGDAGGSVIYLPADVTK 61

Query: 63  LASVRNFASEYNIQHHQLNILINNAGIMGT------PFMLSKDNIELQFATNHLGHFLLT 116
              + +  +    +   L+IL+NNAGI         P     ++ +   A      F   
Sbjct: 62  EDEIADMIAAAAAEFGGLDILVNNAGIQHVAPIEEFPP----EDWDRIIAVMLTSAFHTI 117

Query: 117 NLLLDTMKKTARKSGGEGRIINVSS-EGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLA 175
              L  MKK      G GRIIN++S  G                        AY  +K  
Sbjct: 118 RAALPHMKK-----QGWGRIINIASAHGLV----------------ASPFKSAYVAAKHG 156

Query: 176 NILHANELARRLKEDGVDITANSVHPGAIATNIIR 210
            I     LA  + E G  IT N++ PG + T ++ 
Sbjct: 157 LIGLTKVLALEVAEHG--ITVNAICPGYVRTPLVE 189

This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species. Length = 255

>gnl|CDD|237100 PRK12429, PRK12429, 3-hydroxybutyrate dehydrogenase; Provisional

 Score = 63.0 bits (154), Expect = 8e-12
 Identities = 45/147 (30%), Positives = 61/147 (41%), Gaps = 23/147 (15%)

Query: 4   VITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSL 63
           ++TGA SGIG E A  LA  G  VV+   +  A     E + K     K   + +D++  
Sbjct: 8   LVTGAASGIGLEIALALAKEGAKVVIADLNDEAAAAAAEALQKA--GGKAIGVAMDVTDE 65

Query: 64  ASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQFATN--------HL-GHFL 114
            ++             ++IL+NNAGI           IE  F T          L G FL
Sbjct: 66  EAINAGIDYAVETFGGVDILVNNAGIQHV------APIE-DFPTEKWKKMIAIMLDGAFL 118

Query: 115 LTNLLLDTMKKTARKSGGEGRIINVSS 141
            T   L  MK       G GRIIN++S
Sbjct: 119 TTKAALPIMKAQ-----GGGRIINMAS 140

Length = 258

>gnl|CDD|180411 PRK06123, PRK06123, short chain dehydrogenase; Provisional

 Score = 62.9 bits (153), Expect = 8e-12
 Identities = 64/212 (30%), Positives = 97/212 (45%), Gaps = 28/212 (13%)

Query: 3   IVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMEL--DL 60
           ++ITGA+ GIG  TA + A RG  V +        +D  E +V+ I     +A+ +  D+
Sbjct: 5   MIITGASRGIGAATALLAAERGYAVCLNYL---RNRDAAEAVVQAIRRQGGEALAVAADV 61

Query: 61  SSLASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSK-DNIELQ--FATNHLGHFLLTN 117
           +  A V       + +  +L+ L+NNAGI+     L + D   L   FATN +G FL   
Sbjct: 62  ADEADVLRLFEAVDRELGRLDALVNNAGILEAQMRLEQMDAARLTRIFATNVVGSFLCAR 121

Query: 118 LLLDTMKKTARKSGGE-GRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLAN 176
              + +K+ + + GG  G I+NVSS   RL                   +  Y+ SK A 
Sbjct: 122 ---EAVKRMSTRHGGRGGAIVNVSSMAARLG--------------SPGEYIDYAASKGAI 164

Query: 177 ILHANELARRLKEDGVDITANSVHPGAIATNI 208
                 LA+ +  +G  I  N+V PG I T I
Sbjct: 165 DTMTIGLAKEVAAEG--IRVNAVRPGVIYTEI 194

Length = 248

>gnl|CDD|213929 TIGR04316, dhbA_paeA, 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase

 Score = 62.7 bits (153), Expect = 9e-12
 Identities = 54/204 (26%), Positives = 81/204 (39%), Gaps = 26/204 (12%)

Query: 5   ITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLA 64
           +TGA  GIG   AR LA  G   V  V D    + ++               +LD++  A
Sbjct: 3   VTGAAQGIGYAVARALAEAGA-RVAAV-DRNFEQLLELVADLRRYGYPFATYKLDVADSA 60

Query: 65  SVRNFASEYNIQHHQLNILINNAGI--MGTPFMLSKDNIELQFATNHLGHFLLTNLLLDT 122
           +V         ++  +++L+N AGI  +G    LS ++ +  FA N  G F ++  +   
Sbjct: 61  AVDEVVQRLEREYGPIDVLVNVAGILRLGAIDSLSDEDWQATFAVNTFGVFNVSQAVSPR 120

Query: 123 MKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANILHANE 182
           MK   R+SG    I+ V S    +                  G  AY+ SK A  +    
Sbjct: 121 MK--RRRSGA---IVTVGSNAANVPRM---------------GMAAYAASKAALTMLTKC 160

Query: 183 LARRLKEDGVDITANSVHPGAIAT 206
           L   L   G  I  N V PG+  T
Sbjct: 161 LGLELAPYG--IRCNVVSPGSTDT 182

Members of this family are 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase (EC 1.3.1.28), the third enzyme in the biosynthesis of 2,3-dihydroxybenzoic acid (DHB) from chorismate. The first two enzymes are isochorismate synthase (EC 5.4.4.2) and isochorismatase (EC 3.3.2.1). Synthesis is often followed by adenylation by the enzyme DHBA-AMP ligase (EC 2.7.7.58) to activate (DHB) for a non-ribosomal peptide synthetase. Length = 250

>gnl|CDD|180817 PRK07060, PRK07060, short chain dehydrogenase; Provisional

 Score = 62.4 bits (152), Expect = 1e-11
 Identities = 54/210 (25%), Positives = 79/210 (37%), Gaps = 42/210 (20%)

Query: 3   IVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSS 62
           +++TGA+SGIG   A  LA RG  VV   R+ AA   +             + + LD+  
Sbjct: 12  VLVTGASSGIGRACAVALAQRGARVVAAARNAAALDRLAGET-------GCEPLRLDVGD 64

Query: 63  LASVRNFASEYNIQHHQLNILINNAGI--MGTPFMLSKDNIELQFATNHLGHFLLTNLLL 120
            A++R   +         + L+N AGI  + +   ++ +  +   A N  G  L      
Sbjct: 65  DAAIRAALAA----AGAFDGLVNCAGIASLESALDMTAEGFDRVMAVNARGAAL------ 114

Query: 121 DTMKKTARK---SGGEGRIINVSSE-GHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLAN 176
              +  AR    +G  G I+NVSS+                    G     AY  SK A 
Sbjct: 115 -VARHVARAMIAAGRGGSIVNVSSQAALV----------------GLPDHLAYCASKAAL 157

Query: 177 ILHANELARRLKEDGVDITANSVHPGAIAT 206
                 L   L   G  I  NSV+P    T
Sbjct: 158 DAITRVLCVELGPHG--IRVNSVNPTVTLT 185

Length = 245

>gnl|CDD|187603 cd05345, BKR_3_SDR_c, putative beta-ketoacyl acyl carrier protein [ACP] reductase (BKR), subgroup 3, classical (c) SDR

 Score = 62.4 bits (152), Expect = 1e-11
 Identities = 39/143 (27%), Positives = 64/143 (44%), Gaps = 13/143 (9%)

Query: 4   VITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSL 63
           ++TGA SG G   AR  A  G  VV+   +    + V      +I  A + A++ D++  
Sbjct: 9   IVTGAGSGFGEGIARRFAQEGARVVIADINADGAERV----AADIGEAAI-AIQADVTKR 63

Query: 64  ASVRNFASEYNIQHHQLNILINNAGIMGTPFML---SKDNIELQFATNHLGHFLLTNLLL 120
           A V         +  +L+IL+NNAGI      +    ++  +  FA N    +L    L+
Sbjct: 64  ADVEAMVEAALSKFGRLDILVNNAGITHRNKPMLEVDEEEFDRVFAVNVKSIYLSAQALV 123

Query: 121 DTMKKTARKSGGEGRIINVSSEG 143
             M++      G G IIN++S  
Sbjct: 124 PHMEE-----QGGGVIINIASTA 141

This subgroup includes the putative Brucella melitensis biovar Abortus 2308 BKR, FabG, Mesorhizobium loti MAFF303099 FabG, and other classical SDRs. BKR, a member of the SDR family, catalyzes the NADPH-dependent reduction of acyl carrier protein in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of 4 elongation steps, which are repeated to extend the fatty acid chain thru the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I Fas utilizes one or 2 multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 248

>gnl|CDD|187644 cd08940, HBDH_SDR_c, d-3-hydroxybutyrate dehydrogenase (HBDH), classical (c) SDRs

 Score = 62.5 bits (152), Expect = 1e-11
 Identities = 47/141 (33%), Positives = 69/141 (48%), Gaps = 9/141 (6%)

Query: 4   VITGATSGIGTETARVLALRGVHVVM-GVRDIAAGKDVKETIVKEIPSAKVDAMELDLSS 62
           ++TG+TSGIG   AR LA  G ++V+ G  D A  + V+  +  +    KV     DLS 
Sbjct: 6   LVTGSTSGIGLGIARALAAAGANIVLNGFGDAAEIEAVRAGLAAK-HGVKVLYHGADLSK 64

Query: 63  LASVRNFASEYNIQHHQLNILINNAGIMGTPFM--LSKDNIELQFATNHLGHFLLTNLLL 120
            A++ +  +    Q   ++IL+NNAGI     +     +  +   A N    F  T L L
Sbjct: 65  PAAIEDMVAYAQRQFGGVDILVNNAGIQHVAPIEDFPTEKWDAIIALNLSAVFHTTRLAL 124

Query: 121 DTMKKTARKSGGEGRIINVSS 141
             MKK      G GRIIN++S
Sbjct: 125 PHMKKQ-----GWGRIINIAS 140

DHBDH, an NAD+ -dependent enzyme, catalyzes the interconversion of D-3-hydroxybutyrate and acetoacetate. It is a classical SDR, with the canonical NAD-binding motif and active site tetrad. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 258

>gnl|CDD|187614 cd05356, 17beta-HSD1_like_SDR_c, 17-beta-hydroxysteroid dehydrogenases (17beta-HSDs) types -1, -3, and -12, -like, classical (c) SDRs

 Score = 61.9 bits (151), Expect = 1e-11
 Identities = 59/218 (27%), Positives = 93/218 (42%), Gaps = 30/218 (13%)

Query: 4   VITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSL 63
           V+TGAT GIG   A  LA RG +V++  R       V + I ++    +   +  D S+ 
Sbjct: 5   VVTGATDGIGKAYAEELAKRGFNVILISRTQEKLDAVAKEIEEKY-GVETKTIAADFSAG 63

Query: 64  ASVRNFASEYNIQHHQLNILINNAGI---MGTPFM-LSKDNIELQFATNHLGHFLLTNLL 119
             +     E  ++   + IL+NN GI   +   F+   +D ++     N +    +T L+
Sbjct: 64  DDIYE-RIEKELEGLDIGILVNNVGISHSIPEYFLETPEDELQDIINVNVMATLKMTRLI 122

Query: 120 LDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANILH 179
           L  M K  RK G    I+N+SS    +             P+       YS SK      
Sbjct: 123 LPGMVK--RKKGA---IVNISSFAGLI-------------PTPL--LATYSASKAFLDFF 162

Query: 180 ANELARRLKEDGVDITANSVHPGAIATNI--IRHNSLF 215
           +  L    K  G+D+   S+ P  +AT +  IR +SLF
Sbjct: 163 SRALYEEYKSQGIDV--QSLLPYLVATKMSKIRKSSLF 198

This subgroup includes various 17-beta-hydroxysteroid dehydrogenases and 3-ketoacyl-CoA reductase, these are members of the SDR family, and contain the canonical active site tetrad and glycine-rich NAD-binding motif of the classical SDRs. 3-ketoacyl-CoA reductase (KAR, aka 17beta-HSD type 12, encoded by HSD17B12) acts in fatty acid elongation; 17beta- hydroxysteroid dehydrogenases are isozymes that catalyze activation and inactivation of estrogen and androgens, and include members of the SDR family. 17beta-estradiol dehydrogenase (aka 17beta-HSD type 1, encoded by HSD17B1) converts estrone to estradiol. Estradiol is the predominant female sex hormone. 17beta-HSD type 3 (aka testosterone 17-beta-dehydrogenase 3, encoded by HSD17B3) catalyses the reduction of androstenedione to testosterone, it also accepts estrogens as substrates. This subgroup also contains a putative steroid dehydrogenase let-767 from Caenorhabditis elegans, mutation in which results in hypersensitivity to cholesterol limitation. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 239

>gnl|CDD|187665 cd09805, type2_17beta_HSD-like_SDR_c, human 17beta-hydroxysteroid dehydrogenase type 2 (type 2 17beta-HSD)-like, classical (c) SDRs

 Score = 61.9 bits (151), Expect = 2e-11
 Identities = 58/232 (25%), Positives = 101/232 (43%), Gaps = 36/232 (15%)

Query: 3   IVITGATSGIGTETARVLALRGVHVVMGV-RDIAAGKDVKETIVKEIPSAKVDAMELDLS 61
           ++ITG  SG G   A+ L   G  V+ G       G       ++ + S ++  ++LD++
Sbjct: 3   VLITGCDSGFGNLLAKKLDSLGFTVLAGCLTKNGPGA----KELRRVCSDRLRTLQLDVT 58

Query: 62  SLASVRNFASEYNIQHHQ---LNILINNAGIMGTP---FMLSKDNIELQFATNHLGHFLL 115
               ++  A+++  +H     L  L+NNAGI+G      +L  D+       N  G   +
Sbjct: 59  KPEQIKR-AAQWVKEHVGEKGLWGLVNNAGILGFGGDEELLPMDDYRKCMEVNLFGTVEV 117

Query: 116 TNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLA 175
           T   L  +++ A+     GR++NVSS G R+ +  G                AY  SK A
Sbjct: 118 TKAFLPLLRR-AK-----GRVVNVSSMGGRVPFPAG---------------GAYCASKAA 156

Query: 176 NILHANELARRLKEDGVDITANSVHPGAIATNIIRHNSLF-RSMNTILHALP 226
               ++ L R L+  GV ++   + PG   T I  ++ L+ +    +   LP
Sbjct: 157 VEAFSDSLRRELQPWGVKVSI--IEPGNFKTGITGNSELWEKQAKKLWERLP 206

17beta-hydroxysteroid dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens. This classical-SDR subgroup includes the human proteins: type 2 17beta-HSD, type 6 17beta-HSD, type 2 11beta-HSD, dehydrogenase/reductase SDR family member 9, short-chain dehydrogenase/reductase family 9C member 7, 3-hydroxybutyrate dehydrogenase type 1, and retinol dehydrogenase 5. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 281

>gnl|CDD|235813 PRK06482, PRK06482, short chain dehydrogenase; Provisional

 Score = 62.1 bits (151), Expect = 2e-11
 Identities = 49/147 (33%), Positives = 74/147 (50%), Gaps = 14/147 (9%)

Query: 5   ITGATSGIGTE-TARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSL 63
           ITGA+SG G   T R+LA RG  V   VR   A  D+K          ++  ++LD++  
Sbjct: 7   ITGASSGFGRGMTERLLA-RGDRVAATVRRPDALDDLKARY-----GDRLWVLQLDVTDS 60

Query: 64  ASVRNFASEYNIQHHQLNILINNAG--IMGTPFMLSKDNIELQFATNHLGHFLLTNLLLD 121
           A+VR           +++++++NAG  + G    LS   I  Q  TN +G   +    L 
Sbjct: 61  AAVRAVVDRAFAALGRIDVVVSNAGYGLFGAAEELSDAQIRRQIDTNLIGSIQVIRAALP 120

Query: 122 TMKKTARKSGGEGRIINVSSEGHRLAY 148
            +    R+ GG GRI+ VSSEG ++AY
Sbjct: 121 HL----RRQGG-GRIVQVSSEGGQIAY 142

Length = 276

>gnl|CDD|235712 PRK06138, PRK06138, short chain dehydrogenase; Provisional

 Score = 61.3 bits (149), Expect = 3e-11
 Identities = 61/209 (29%), Positives = 88/209 (42%), Gaps = 27/209 (12%)

Query: 4   VITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSL 63
           ++TGA SGIG  TA++ A  G  VV+  RD  A + V   I       +  A + D+ S 
Sbjct: 9   IVTGAGSGIGRATAKLFAREGARVVVADRDAEAAERVAAAIAA---GGRAFARQGDVGSA 65

Query: 64  ASVRNFASEYNIQHHQLNILINNAG--IMGTPFMLSKDNIELQFATNHLGHFLLTNLLLD 121
            +V         +  +L++L+NNAG    GT     + + +     N  G FL     + 
Sbjct: 66  EAVEALVDFVAARWGRLDVLVNNAGFGCGGTVVTTDEADWDAVMRVNVGGVFLWAKYAIP 125

Query: 122 TMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANILHAN 181
            M    ++ GG G I+N +S+   LA             +G  G  AY  SK A      
Sbjct: 126 IM----QRQGG-GSIVNTASQ---LAL------------AGGRGRAAYVASKGAIASLTR 165

Query: 182 ELARRLKEDGVDITANSVHPGAIATNIIR 210
            +A     DG  I  N+V PG I T   R
Sbjct: 166 AMALDHATDG--IRVNAVAPGTIDTPYFR 192

Length = 252

>gnl|CDD|187643 cd08939, KDSR-like_SDR_c, 3-ketodihydrosphingosine reductase (KDSR) and related proteins, classical (c) SDR

 Score = 61.1 bits (149), Expect = 3e-11
 Identities = 53/209 (25%), Positives = 87/209 (41%), Gaps = 28/209 (13%)

Query: 3   IVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEI--PSAKVDAMELDL 60
           ++ITG +SGIG   A+ L   G +V++  R  +  ++  E I  E      KV  +  DL
Sbjct: 4   VLITGGSSGIGKALAKELVKEGANVIIVARSESKLEEAVEEIEAEANASGQKVSYISADL 63

Query: 61  SSLASVRNFASEYNIQHHQLNILINNAGIMGTP--FM-LSKDNIELQFATNHLGHFLLTN 117
           S    V    ++   +    ++++N AG +  P  F  L+ +  E     N+ G   + +
Sbjct: 64  SDYEEVEQAFAQAVEKGGPPDLVVNCAG-ISIPGLFEDLTAEEFERGMDVNYFGSLNVAH 122

Query: 118 LLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANI 177
            +L  MK+        G I+ VSS+    A              G  G+ AY  SK A  
Sbjct: 123 AVLPLMKEQ-----RPGHIVFVSSQ---AALV------------GIYGYSAYCPSKFALR 162

Query: 178 LHANELARRLKEDGVDITANSVHPGAIAT 206
             A  L + LK   + ++   V+P    T
Sbjct: 163 GLAESLRQELKPYNIRVSV--VYPPDTDT 189

These proteins include members identified as KDSR, ribitol type dehydrogenase, and others. The group shows strong conservation of the active site tetrad and glycine rich NAD-binding motif of the classical SDRs. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 239

>gnl|CDD|180984 PRK07454, PRK07454, short chain dehydrogenase; Provisional

 Score = 61.1 bits (149), Expect = 3e-11
 Identities = 58/209 (27%), Positives = 82/209 (39%), Gaps = 32/209 (15%)

Query: 5   ITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLA 64
           ITGA+SGIG  TA   A  G  + +  R   A + +   +       K  A  +DLS+  
Sbjct: 11  ITGASSGIGKATALAFAKAGWDLALVARSQDALEALAAELRST--GVKAAAYSIDLSNPE 68

Query: 65  SVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQ--FATNHLGHFLLTNLLLDT 122
           ++    +E   Q    ++LINNAG+  T  +L     + Q     N    F   + +L  
Sbjct: 69  AIAPGIAELLEQFGCPDVLINNAGMAYTGPLLEMPLSDWQWVIQLNLTSVFQCCSAVLPG 128

Query: 123 MKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFR---AYSQSKLANILH 179
           M    R  GG G IINVSS                   +  N F    AY  SK A    
Sbjct: 129 M----RARGG-GLIINVSS--I----------------AARNAFPQWGAYCVSKAALAAF 165

Query: 180 ANELARRLKEDGVDITANSVHPGAIATNI 208
              LA   +  G  I   ++  GA+ T +
Sbjct: 166 TKCLAEEERSHG--IRVCTITLGAVNTPL 192

Length = 241

>gnl|CDD|187596 cd05337, BKR_1_SDR_c, putative beta-ketoacyl acyl carrier protein [ACP] reductase (BKR), subgroup 1, classical (c) SDR

 Score = 61.3 bits (149), Expect = 3e-11
 Identities = 55/214 (25%), Positives = 84/214 (39%), Gaps = 29/214 (13%)

Query: 4   VITGATSGIGTETARVLALRG--VHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLS 61
           ++TGA+ GIG   A  LA RG  + +     D  A + V E         +    + D+ 
Sbjct: 5   IVTGASRGIGRAIATELAARGFDIAINDLPDDDQATEVVAEV---LAAGRRAIYFQADIG 61

Query: 62  SLASVRNFASEYNIQHHQLNILINNAGIMGTP----FMLSKDNIELQFATNHLGHFLLTN 117
            L+       +      +L+ L+NNAGI   P      L++D+ +   A N  G F LT 
Sbjct: 62  ELSDHEALLDQAWEDFGRLDCLVNNAGIAVRPRGDLLDLTEDSFDRLIAINLRGPFFLTQ 121

Query: 118 LLLDTM-KKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRA-YSQSKLA 175
            +   M ++  R  G    II V+S    L                    R  Y  SK  
Sbjct: 122 AVARRMVEQPDRFDGPHRSIIFVTSINAYLVSPN----------------RGEYCISKAG 165

Query: 176 NILHANELARRLKEDGVDITANSVHPGAIATNII 209
             +    LA RL ++G  I  + + PG I T++ 
Sbjct: 166 LSMATRLLAYRLADEG--IAVHEIRPGLIHTDMT 197

This subgroup includes Escherichia coli CFT073 FabG. The Escherichai coli K12 BKR, FabG, belongs to a different subgroup. BKR catalyzes the NADPH-dependent reduction of ACP in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of four elongation steps, which are repeated to extend the fatty acid chain through the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and a final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I FAS utilizes one or two multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet) NAD(P)(H) binding region and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H) binding pattern: TGxxxGxG in classical SDRs. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P) binding motif and an altered active site motif (YXXXN). Fungal type type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P) binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr-151 and Lys-155, and well as Asn-111 (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 255

>gnl|CDD|236074 PRK07666, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 60.9 bits (148), Expect = 4e-11
 Identities = 60/213 (28%), Positives = 88/213 (41%), Gaps = 26/213 (12%)

Query: 4   VITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSL 63
           +ITGA  GIG   A  LA  GV+V +  R     K V E +       KV     D+S  
Sbjct: 11  LITGAGRGIGRAVAIALAKEGVNVGLLARTEENLKAVAEEVEAY--GVKVVIATADVSDY 68

Query: 64  ASVRNFASEYNIQHHQLNILINNAGI--MGTPFMLSKDNIELQFATNHLGHFLLTNLLLD 121
             V     +   +   ++ILINNAGI   G    L     E     N +G +  T  +L 
Sbjct: 69  EEVTAAIEQLKNELGSIDILINNAGISKFGKFLELDPAEWEKIIQVNLMGVYYATRAVLP 128

Query: 122 TMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANILHAN 181
           +M +  R+SG    IIN+SS         G +        G     AYS SK   +    
Sbjct: 129 SMIE--RQSGD---IINISSTA-------GQK--------GAAVTSAYSASKFGVLGLTE 168

Query: 182 ELARRLKEDGVDITANSVHPGAIATNIIRHNSL 214
            L + +++  + +TA  + P  +AT++     L
Sbjct: 169 SLMQEVRKHNIRVTA--LTPSTVATDMAVDLGL 199

Length = 239

>gnl|CDD|187601 cd05343, Mgc4172-like_SDR_c, human Mgc4172-like, classical (c) SDRs

 Score = 61.0 bits (148), Expect = 4e-11
 Identities = 55/206 (26%), Positives = 86/206 (41%), Gaps = 21/206 (10%)

Query: 4   VITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSL 63
           ++TGA+ GIG   AR L   G+ VV   R +   + +     +      +   + DLS+ 
Sbjct: 10  LVTGASVGIGAAVARALVQHGMKVVGCARRVDKIEALAAE-CQSAGYPTLFPYQCDLSNE 68

Query: 64  ASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQ--FATNHLGHFLLTNLLLD 121
             + +  S    QH  +++ INNAG+     +LS      +  F  N L   + T     
Sbjct: 69  EQILSMFSAIRTQHQGVDVCINNAGLARPEPLLSGKTEGWKEMFDVNVLALSICTREAYQ 128

Query: 122 TMKKTARKSGGEGRIINVSS-EGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANILHA 180
           +MK   R    +G IIN++S  GHR+             P     F  Y+ +K A     
Sbjct: 129 SMK--ERNV-DDGHIININSMSGHRVP------------PVSVFHF--YAATKHAVTALT 171

Query: 181 NELARRLKEDGVDITANSVHPGAIAT 206
             L + L+E    I A S+ PG + T
Sbjct: 172 EGLRQELREAKTHIRATSISPGLVET 197

Human Mgc4172-like proteins, putative SDRs. These proteins are members of the SDR family, with a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250

>gnl|CDD|187639 cd08934, CAD_SDR_c, clavulanic acid dehydrogenase (CAD), classical (c) SDR

 Score = 61.0 bits (148), Expect = 4e-11
 Identities = 57/212 (26%), Positives = 85/212 (40%), Gaps = 30/212 (14%)

Query: 4   VITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSA--KVDAMELDLS 61
           ++TGA+SGIG  TAR LA  G  V +  R      D  E +  E+ +   K   +ELD++
Sbjct: 7   LVTGASSGIGEATARALAAEGAAVAIAARR----VDRLEALADELEAEGGKALVLELDVT 62

Query: 62  SLASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQ--FATNHLGHFLLTNLL 119
               V            +L+IL+NNAGIM    +   D  +      TN LG    T+  
Sbjct: 63  DEQQVDAAVERTVEALGRLDILVNNAGIMLLGPVEDADTTDWTRMIDTNLLGLMYTTHAA 122

Query: 120 LDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANILH 179
           L       R     G I+N+SS   R+A                     Y+ +K      
Sbjct: 123 LPHHL--LRNK---GTIVNISSVAGRVA---------------VRNSAVYNATKFGVNAF 162

Query: 180 ANELARRLKEDGVDITANSVHPGAIATNIIRH 211
           +  L + + E GV +    + PG + T +  H
Sbjct: 163 SEGLRQEVTERGVRVVV--IEPGTVDTELRDH 192

CAD catalyzes the NADP-dependent reduction of clavulanate-9-aldehyde to clavulanic acid, a beta-lactamase inhibitor. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 243

>gnl|CDD|181120 PRK07792, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 61.0 bits (148), Expect = 5e-11
 Identities = 50/145 (34%), Positives = 73/145 (50%), Gaps = 10/145 (6%)

Query: 4   VITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSA--KVDAMELDLS 61
           V+TGA +G+G   A  LA  G  VV  V D+A+  D  + +  EI +A  K  A+  D+S
Sbjct: 16  VVTGAAAGLGRAEALGLARLGATVV--VNDVASALDASDVL-DEIRAAGAKAVAVAGDIS 72

Query: 62  SLASVRNFASEYNIQHHQLNILINNAGIMGTP--FMLSKDNIELQFATNHLGHFLLTNLL 119
             A+         +    L+I++NNAGI      F +S +  +   A +  GHFLLT   
Sbjct: 73  QRATADELV-ATAVGLGGLDIVVNNAGITRDRMLFNMSDEEWDAVIAVHLRGHFLLTRNA 131

Query: 120 LDTMKKTARKSGGE--GRIINVSSE 142
               +  A+ +GG   GRI+N SSE
Sbjct: 132 AAYWRAKAKAAGGPVYGRIVNTSSE 156

Length = 306

>gnl|CDD|188169 TIGR01829, AcAcCoA_reduct, acetoacetyl-CoA reductase

 Score = 60.1 bits (146), Expect = 6e-11
 Identities = 54/209 (25%), Positives = 87/209 (41%), Gaps = 27/209 (12%)

Query: 5   ITGATSGIGTETARVLALRGVHVVMGVR-DIAAGKDVKETIVKEIPSAKVDAMELDLSSL 63
           +TG   GIGT   + LA  G  V      +    +   +   +         +E D+SS 
Sbjct: 5   VTGGMGGIGTAICQRLAKDGYRVAANCGPNEERAEAWLQE--QGALGFDFRVVEGDVSSF 62

Query: 64  ASVRNFASEYNIQHHQLNILINNAGIM--GTPFMLSKDNIELQFATNHLGHFLLTNLLLD 121
            S +   ++   +   +++L+NNAGI    T   ++ +       TN    F +T  ++D
Sbjct: 63  ESCKAAVAKVEAELGPIDVLVNNAGITRDATFKKMTYEQWSAVIDTNLNSVFNVTQPVID 122

Query: 122 TMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANILHAN 181
            M++      G GRIIN+SS               +N   G  G   YS +K   I    
Sbjct: 123 GMRER-----GWGRIINISS---------------VNGQKGQFGQTNYSAAKAGMIGFTK 162

Query: 182 ELARRLKEDGVDITANSVHPGAIATNIIR 210
            LA+     GV  T N++ PG IAT+++ 
Sbjct: 163 ALAQEGATKGV--TVNTISPGYIATDMVM 189

This model represent acetoacetyl-CoA reductase, a member of the family short-chain-alcohol dehydrogenases. Note that, despite the precision implied by the enzyme name, the reaction of EC 1.1.1.36 is defined more generally as (R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families. Length = 242

>gnl|CDD|181139 PRK07832, PRK07832, short chain dehydrogenase; Provisional

 Score = 60.4 bits (147), Expect = 7e-11
 Identities = 58/217 (26%), Positives = 95/217 (43%), Gaps = 40/217 (18%)

Query: 4   VITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPS--AKV-DAMELDL 60
            +TGA SGIG  TA  LA +G  + +  RD A G       V +  +    V +   LD+
Sbjct: 4   FVTGAASGIGRATALRLAAQGAELFLTDRD-ADG---LAQTVADARALGGTVPEHRALDI 59

Query: 61  SSLASVRNFASEYNIQHHQLNILINNAGI--MGTPFMLSKDNIELQFATNHLG--HFLLT 116
           S   +V  FA++ +  H  +++++N AGI   GT   L+ +        N +G  H    
Sbjct: 60  SDYDAVAAFAADIHAAHGSMDVVMNIAGISAWGTVDRLTHEQWRRMVDVNLMGPIH---- 115

Query: 117 NLLLDTMKKTARKSGGEGRIINVSSEGHRLA--YHEGIRFDKINDPSGYNGFRAYSQSKL 174
             +++T       +G  G ++NVSS    +A  +H                  AYS SK 
Sbjct: 116 --VIETFVPPMVAAGRGGHLVNVSSAAGLVALPWHA-----------------AYSASKF 156

Query: 175 ANILHANELAR-RLKEDGVDITANSVHPGAIATNIIR 210
             +   +E+ R  L   G+ ++   V PGA+ T ++ 
Sbjct: 157 G-LRGLSEVLRFDLARHGIGVSV--VVPGAVKTPLVN 190

Length = 272

>gnl|CDD|187640 cd08935, mannonate_red_SDR_c, putative D-mannonate oxidoreductase, classical (c) SDR

 Score = 60.5 bits (147), Expect = 7e-11
 Identities = 60/223 (26%), Positives = 81/223 (36%), Gaps = 44/223 (19%)

Query: 3   IVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPS--AKVDAMELDL 60
            VITG T  +G   AR LA  G  V    R+   G  V     KEI +   +  A+  D+
Sbjct: 8   AVITGGTGVLGGAMARALAQAGAKVAALGRNQEKGDKV----AKEITALGGRAIALAADV 63

Query: 61  SSLASVRNFASEYNIQHHQLNILINNAG----------------IMGTPFMLSKDNIELQ 104
              AS+     E   Q   ++ILIN AG                     F L ++  E  
Sbjct: 64  LDRASLERAREEIVAQFGTVDILINGAGGNHPDATTDPEHYEPETEQNFFDLDEEGWEFV 123

Query: 105 FATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYN 164
           F  N  G FL + +    M +        G IIN+SS     A+       K+       
Sbjct: 124 FDLNLNGSFLPSQVFGKDMLE-----QKGGSIINISSMN---AF---SPLTKV------- 165

Query: 165 GFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATN 207
              AYS +K A       LA      GV +  N++ PG   T 
Sbjct: 166 --PAYSAAKAAVSNFTQWLAVEFATTGVRV--NAIAPGFFVTP 204

D-mannonate oxidoreductase catalyzes the NAD-dependent interconversion of D-mannonate and D-fructuronate. This subgroup includes Bacillus subtitils UxuB/YjmF, a putative D-mannonate oxidoreductase; the B. subtilis UxuB gene is part of a putative ten-gene operon (the Yjm operon) involved in hexuronate catabolism. Escherichia coli UxuB does not belong to this subgroup. This subgroup has a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 271

>gnl|CDD|187591 cd05330, cyclohexanol_reductase_SDR_c, cyclohexanol reductases, including levodione reductase, classical (c) SDRs

 Score = 60.2 bits (146), Expect = 8e-11
 Identities = 54/210 (25%), Positives = 91/210 (43%), Gaps = 25/210 (11%)

Query: 3   IVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSS 62
           ++ITG  SG+G  TA  LA  G  + +   +    +  K  +++  P A+V  ++ D+S 
Sbjct: 6   VLITGGGSGLGLATAVRLAKEGAKLSLVDLNEEGLEAAKAALLEIAPDAEVLLIKADVSD 65

Query: 63  LASVRNFASEYNIQHHQLNILINNAGIMGTPFM---LSKDNIELQFATNHLGHFLLTNLL 119
            A V  +      Q  +++   NNAGI G   +      D  +   + N  G F     +
Sbjct: 66  EAQVEAYVDATVEQFGRIDGFFNNAGIEGKQNLTEDFGADEFDKVVSINLRGVFYGLEKV 125

Query: 120 LDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANILH 179
           L  M++      G G I+N +S G       GIR   + + SG      Y+ +K   +  
Sbjct: 126 LKVMREQ-----GSGMIVNTASVG-------GIR--GVGNQSG------YAAAKHGVVGL 165

Query: 180 ANELARRLKEDGVDITANSVHPGAIATNII 209
               A    + G+ I  N++ PGAI T ++
Sbjct: 166 TRNSAVEYGQYGIRI--NAIAPGAILTPMV 193

Cyloclohexanol reductases,including (6R)-2,2,6-trimethyl-1,4-cyclohexanedione (levodione) reductase of Corynebacterium aquaticum, catalyze the reversible oxidoreduction of hydroxycyclohexanone derivatives. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257

>gnl|CDD|187649 cd08945, PKR_SDR_c, Polyketide ketoreductase, classical (c) SDR

 Score = 59.9 bits (145), Expect = 9e-11
 Identities = 59/208 (28%), Positives = 86/208 (41%), Gaps = 30/208 (14%)

Query: 4   VITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEI--PSAKVDAMELDLS 61
           ++TGATSGIG   AR L   G+ V +  R     + +  T VKE+     + D    D+ 
Sbjct: 7   LVTGATSGIGLAIARRLGKEGLRVFVCARG---EEGLATT-VKELREAGVEADGRTCDVR 62

Query: 62  SLASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQF---ATNHLGHFLLTNL 118
           S+  +    +    ++  +++L+NNAG  G        + EL      TN  G F +T  
Sbjct: 63  SVPEIEALVAAAVARYGPIDVLVNNAGRSGGGATAELAD-ELWLDVVETNLTGVFRVTKE 121

Query: 119 LLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANIL 178
           +L   K       G GRIIN++S G +                G      YS SK   + 
Sbjct: 122 VL---KAGGMLERGTGRIINIASTGGK---------------QGVVHAAPYSASKHGVVG 163

Query: 179 HANELARRLKEDGVDITANSVHPGAIAT 206
               L   L   G  IT N+V PG + T
Sbjct: 164 FTKALGLELARTG--ITVNAVCPGFVET 189

Polyketide ketoreductase (KR) is a classical SDR with a characteristic NAD-binding pattern and active site tetrad. Aromatic polyketides include various aromatic compounds of pharmaceutical interest. Polyketide KR, part of the type II polyketide synthase (PKS) complex, is comprised of stand-alone domains that resemble the domains found in fatty acid synthase and multidomain type I PKS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 258

>gnl|CDD|187634 cd08929, SDR_c4, classical (c) SDR, subgroup 4

 Score = 59.4 bits (144), Expect = 1e-10
 Identities = 51/205 (24%), Positives = 81/205 (39%), Gaps = 29/205 (14%)

Query: 4   VITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSL 63
           ++TGA+ GIG  TAR+L   G  V +  RD      +     +E+    V  +  D+   
Sbjct: 4   LVTGASRGIGEATARLLHAEGYRVGICARD---EARLAAAAAQELE--GVLGLAGDVRDE 58

Query: 64  ASVRNFASEYNIQHHQLNILINNAGI--MGTPFMLSKDNIELQFATNHLGHFLLTNLLLD 121
           A VR            L+ L+NNAG+  M     L+ +   L   TN  G F   +    
Sbjct: 59  ADVRRAVDAMEEAFGGLDALVNNAGVGVMKPVEELTPEEWRLVLDTNLTGAFYCIHKAAP 118

Query: 122 TMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANILHAN 181
            + +      G G I+NV S   + A+  G                AY+ SK   +  + 
Sbjct: 119 ALLRR-----GGGTIVNVGSLAGKNAFKGGA---------------AYNASKFGLLGLSE 158

Query: 182 ELARRLKEDGVDITANSVHPGAIAT 206
                L+E  + +   +V PG++ T
Sbjct: 159 AAMLDLREANIRVV--NVMPGSVDT 181

This subgroup has a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 226

>gnl|CDD|180617 PRK06550, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 59.2 bits (144), Expect = 1e-10
 Identities = 63/208 (30%), Positives = 83/208 (39%), Gaps = 44/208 (21%)

Query: 3   IVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSS 62
           ++ITGA SGIG   AR    +G  V         G D ++   K   S     ++LDLS 
Sbjct: 8   VLITGAASGIGLAQARAFLAQGAQVY--------GVDKQD---KPDLSGNFHFLQLDLSD 56

Query: 63  -LASVRNFASEYNIQHHQLNILINNAGIM-GTPFMLSKDNIELQ--FATNHLGHFLLTNL 118
            L  + ++          ++IL N AGI+     +L     E Q  F TN    FLLT  
Sbjct: 57  DLEPLFDWVP-------SVDILCNTAGILDDYKPLLDTSLEEWQHIFDTNLTSTFLLTRA 109

Query: 119 LLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANIL 178
            L  M    RKS   G IIN+ S               I       G  AY+ SK A   
Sbjct: 110 YLPQML--ERKS---GIIINMCS---------------IASFVAGGGGAAYTASKHALAG 149

Query: 179 HANELARRLKEDGVDITANSVHPGAIAT 206
              +LA    +DG  I    + PGA+ T
Sbjct: 150 FTKQLALDYAKDG--IQVFGIAPGAVKT 175

Length = 235

>gnl|CDD|168186 PRK05693, PRK05693, short chain dehydrogenase; Provisional

 Score = 59.8 bits (145), Expect = 1e-10
 Identities = 58/213 (27%), Positives = 89/213 (41%), Gaps = 33/213 (15%)

Query: 3   IVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSS 62
           ++ITG +SGIG   A      G  V    R        K   V+ + +A   A++LD++ 
Sbjct: 4   VLITGCSSGIGRALADAFKAAGYEVWATAR--------KAEDVEALAAAGFTAVQLDVND 55

Query: 63  LASVRNFASEYNIQHHQLNILINNAG--IMGTPFMLSKDNIELQFATNHLGHFLLTNLLL 120
            A++   A E   +H  L++LINNAG   MG       + +  QF TN      +T  L 
Sbjct: 56  GAALARLAEELEAEHGGLDVLINNAGYGAMGPLLDGGVEAMRRQFETNVFAVVGVTRALF 115

Query: 121 DTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANILHA 180
             +++        G ++N+ S    L              + + G  AY  SK A  +HA
Sbjct: 116 PLLRR------SRGLVVNIGSVSGVLV-------------TPFAG--AYCASKAA--VHA 152

Query: 181 NELARRLKEDGVDITANSVHPGAIATNIIRHNS 213
              A RL+     +    V PGAIA+    + S
Sbjct: 153 LSDALRLELAPFGVQVMEVQPGAIASQFASNAS 185

Length = 274

>gnl|CDD|235990 PRK07326, PRK07326, short chain dehydrogenase; Provisional

 Score = 59.3 bits (144), Expect = 1e-10
 Identities = 51/208 (24%), Positives = 82/208 (39%), Gaps = 34/208 (16%)

Query: 5   ITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLA 64
           ITG + GIG   A  L   G  V +  RD    ++    +  +     V  +  D+   A
Sbjct: 11  ITGGSKGIGFAIAEALLAEGYKVAITARDQKELEEAAAELNNK---GNVLGLAADVRDEA 67

Query: 65  SVRNFASEYNIQHHQLNILINNAGI--MGTPFMLSKDNIELQFATNHLGHFLLTNLLLDT 122
            V+            L++LI NAG+        L+ +   L   TN  G F      +  
Sbjct: 68  DVQRAVDAIVAAFGGLDVLIANAGVGHFAPVEELTPEEWRLVIDTNLTGAFYTIKAAVPA 127

Query: 123 MKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFR---AYSQSKLANILH 179
           +K+      G G IIN+SS    LA              G N F    AY+ SK   +  
Sbjct: 128 LKR------GGGYIINISS----LA--------------GTNFFAGGAAYNASKFGLVGF 163

Query: 180 ANELARRLKEDGVDITANSVHPGAIATN 207
           +      L++ G+ ++  ++ PG++AT+
Sbjct: 164 SEAAMLDLRQYGIKVS--TIMPGSVATH 189

Length = 237

>gnl|CDD|187592 cd05331, DH-DHB-DH_SDR_c, 2,3 dihydro-2,3 dihydrozybenzoate dehydrogenases, classical (c) SDRs

 Score = 59.4 bits (144), Expect = 1e-10
 Identities = 57/210 (27%), Positives = 84/210 (40%), Gaps = 33/210 (15%)

Query: 3   IVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSS 62
           +++TGA  GIG   AR L   G  V           D+   ++ E     +    LD++ 
Sbjct: 1   VIVTGAAQGIGRAVARHLLQAGATV--------IALDLPFVLLLEYG-DPLRLTPLDVAD 51

Query: 63  LASVRNFASEYNIQHHQLNILINNAGI--MGTPFMLSKDNIELQFATNHLGHFLLTNLLL 120
            A+VR   S    +H  ++ L+N AG+   G    LS ++ E  FA N  G F L   + 
Sbjct: 52  AAAVREVCSRLLAEHGPIDALVNCAGVLRPGATDPLSTEDWEQTFAVNVTGVFNLLQAVA 111

Query: 121 DTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANILHA 180
             MK   R++G    I+ V+S             +  + P       AY  SK A    +
Sbjct: 112 PHMK--DRRTGA---IVTVAS-------------NAAHVPR--ISMAAYGASKAALASLS 151

Query: 181 NELARRLKEDGVDITANSVHPGAIATNIIR 210
             L   L   GV    N V PG+  T + R
Sbjct: 152 KCLGLELAPYGV--RCNVVSPGSTDTAMQR 179

2,3 dihydro-2,3 dihydrozybenzoate dehydrogenase shares the characteristics of the classical SDRs. This subgroup includes Escherichai coli EntA which catalyzes the NAD+-dependent oxidation of 2,3-dihydro-2,3-dihydroxybenzoate to 2,3-dihydroxybenzoate during biosynthesis of the siderophore Enterobactin. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 244

>gnl|CDD|168574 PRK06484, PRK06484, short chain dehydrogenase; Validated

 Score = 60.2 bits (146), Expect = 2e-10
 Identities = 50/212 (23%), Positives = 89/212 (41%), Gaps = 32/212 (15%)

Query: 3   IVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSS 62
           +++TGA  GIG    +  A  G  VV+  R++   ++  +++          A+ +D+S 
Sbjct: 8   VLVTGAAGGIGRAACQRFARAGDQVVVADRNVERARERADSL-----GPDHHALAMDVSD 62

Query: 63  LASVRNFASEYNIQHHQLNILINNAGIMGTPFM-----LSKDNIELQFATNHLGHFLLTN 117
            A +R    + + +  ++++L+NNAG+   P M      + +      A N  G +L+  
Sbjct: 63  EAQIREGFEQLHREFGRIDVLVNNAGVTD-PTMTATLDTTLEEFARLQAINLTGAYLVAR 121

Query: 118 LLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANI 177
             L  M +    +     I+NV+S     A   G+               AYS SK A I
Sbjct: 122 EALRLMIEQGHGAA----IVNVAS----GA---GLV--------ALPKRTAYSASKAAVI 162

Query: 178 LHANELARRLKEDGVDITANSVHPGAIATNII 209
                LA      G+ + A  V PG + T ++
Sbjct: 163 SLTRSLACEWAAKGIRVNA--VLPGYVRTQMV 192

Length = 520

>gnl|CDD|187610 cd05352, MDH-like_SDR_c, mannitol dehydrogenase (MDH)-like, classical (c) SDRs

 Score = 58.9 bits (143), Expect = 2e-10
 Identities = 56/215 (26%), Positives = 83/215 (38%), Gaps = 31/215 (14%)

Query: 3   IVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSS 62
            ++TG + GIG   AR LA  G  V +        ++  E + K+    K  A + D+SS
Sbjct: 11  AIVTGGSRGIGLAIARALAEAGADVAIIYNSAPRAEEKAEELAKKYGV-KTKAYKCDVSS 69

Query: 63  LASVRNFASEYNIQHHQLNILINNAGI-MGTPFM-LSKDNIELQFATNHLGHFLLTNLLL 120
             SV     +      +++ILI NAGI +  P +  + +        N  G F       
Sbjct: 70  QESVEKTFKQIQKDFGKIDILIANAGITVHKPALDYTYEQWNKVIDVNLNGVFNCAQAAA 129

Query: 121 DTMKKTARKSGGEGRIINVSS-EGHRLAYHEGIRFDKINDP---SGYNGFRAYSQSKLAN 176
              KK      G+G +I  +S  G             +N P   + YN       SK A 
Sbjct: 130 KIFKKQ-----GKGSLIITASMSGTI-----------VNRPQPQAAYNA------SKAAV 167

Query: 177 ILHANELARRLKEDGVDITANSVHPGAIATNIIRH 211
           I  A  LA    +    I  NS+ PG I T++   
Sbjct: 168 IHLAKSLAVEWAKYF--IRVNSISPGYIDTDLTDF 200

NADP-mannitol dehydrogenase catalyzes the conversion of fructose to mannitol, an acyclic 6-carbon sugar. MDH is a tetrameric member of the SDR family. This subgroup also includes various other tetrameric SDRs, including Pichia stipitis D-arabinitol dehydrogenase (aka polyol dehydrogenase), Candida albicans Sou1p, a sorbose reductase, and Candida parapsilosis (S)-specific carbonyl reductase (SCR, aka S-specific alcohol dehydrogenase) which catalyzes the enantioselective reduction of 2-hydroxyacetophenone into (S)-1-phenyl-1,2-ethanediol. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Length = 252

>gnl|CDD|235935 PRK07109, PRK07109, short chain dehydrogenase; Provisional

 Score = 59.5 bits (145), Expect = 2e-10
 Identities = 58/213 (27%), Positives = 90/213 (42%), Gaps = 38/213 (17%)

Query: 3   IVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMEL--DL 60
           +VITGA++G+G  TAR  A RG  VV+    +A G++  E +  EI +A  +A+ +  D+
Sbjct: 11  VVITGASAGVGRATARAFARRGAKVVL----LARGEEGLEALAAEIRAAGGEALAVVADV 66

Query: 61  SSLASVRNFASEYNIQHHQLNILINNAGI-MGTPFM-LSKDNIELQFATNHLGHFLLTNL 118
           +   +V+  A     +   ++  +NNA + +  PF  ++ +         +LG    T  
Sbjct: 67  ADAEAVQAAADRAEEELGPIDTWVNNAMVTVFGPFEDVTPEEFRRVTEVTYLGVVHGTLA 126

Query: 119 LLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANIL 178
            L  M+   R     G II V S    LAY   I               AY  +K     
Sbjct: 127 ALRHMRPRDR-----GAIIQVGSA---LAY-RSIPLQS-----------AYCAAK----- 161

Query: 179 HANE-----LARRLKEDGVDITANSVHPGAIAT 206
           HA       L   L  DG  ++   V P A+ T
Sbjct: 162 HAIRGFTDSLRCELLHDGSPVSVTMVQPPAVNT 194

Length = 334

>gnl|CDD|187605 cd05347, Ga5DH-like_SDR_c, gluconate 5-dehydrogenase (Ga5DH)-like, classical (c) SDRs

 Score = 58.9 bits (143), Expect = 2e-10
 Identities = 52/215 (24%), Positives = 86/215 (40%), Gaps = 34/215 (15%)

Query: 3   IVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSS 62
            ++TGA+ GIG   A  LA  G ++V+  R+    ++ ++ I KE    +  A   D+S 
Sbjct: 8   ALVTGASRGIGFGIASGLAEAGANIVINSRNEEKAEEAQQLIEKE--GVEATAFTCDVSD 65

Query: 63  LASVRNFASEYNIQHHQLNILINNAGIMGTPFML--SKDNIELQFATNHLGHFLLTNLLL 120
             +++           +++IL+NNAGI+         +         N  G F ++  + 
Sbjct: 66  EEAIKAAVEAIEEDFGKIDILVNNAGIIRRHPAEEFPEAEWRDVIDVNLNGVFFVSQAVA 125

Query: 121 DTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSK--LANIL 178
             M K      G G+IIN+ S               +    G     AY+ SK  +A + 
Sbjct: 126 RHMIKQ-----GHGKIINICS---------------LLSELGGPPVPAYAASKGGVAGLT 165

Query: 179 H--ANELARRLKEDGVDITANSVHPGAIATNIIRH 211
              A E AR        I  N++ PG  AT +   
Sbjct: 166 KALATEWARH------GIQVNAIAPGYFATEMTEA 194

Ga5DH catalyzes the NADP-dependent conversion of carbon source D-gluconate and 5-keto-D-gluconate. This SDR subgroup has a classical Gly-rich NAD(P)-binding motif and a conserved active site tetrad pattern. However, it has been proposed that Arg104 (Streptococcus suis Ga5DH numbering), as well as an active site Ca2+, play a critical role in catalysis. In addition to Ga5DHs this subgroup contains Erwinia chrysanthemi KduD which is involved in pectin degradation, and is a putative 2,5-diketo-3-deoxygluconate dehydrogenase. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107,15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 248

>gnl|CDD|236094 PRK07774, PRK07774, short chain dehydrogenase; Provisional

 Score = 58.6 bits (142), Expect = 2e-10
 Identities = 60/213 (28%), Positives = 89/213 (41%), Gaps = 34/213 (15%)

Query: 4   VITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSL 63
           ++TGA  GIG   A  LA  G  VV+   +    + V + IV +  +A   A+++D+S  
Sbjct: 10  IVTGAAGGIGQAYAEALAREGASVVVADINAEGAERVAKQIVADGGTAI--AVQVDVSDP 67

Query: 64  ASVRNFASEYNIQHHQLNILINNAGIMG--TPFMLSK---DNIELQFATNHLGHFLLTNL 118
            S +  A         ++ L+NNA I G     +L     D  +   + N  G  + T  
Sbjct: 68  DSAKAMADATVSAFGGIDYLVNNAAIYGGMKLDLLITVPWDYYKKFMSVNLDGALVCTRA 127

Query: 119 LLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLA-NI 177
           +   M     K GG G I+N SS    L                Y+ F  Y  +K+  N 
Sbjct: 128 VYKHM----AKRGG-GAIVNQSSTAAWL----------------YSNF--YGLAKVGLNG 164

Query: 178 LHANELARRLKEDGVDITANSVHPGAIATNIIR 210
           L    LAR L   G++I  N++ PG I T   R
Sbjct: 165 LTQQ-LAREL--GGMNIRVNAIAPGPIDTEATR 194

Length = 250

>gnl|CDD|187666 cd09806, type1_17beta-HSD-like_SDR_c, human estrogenic 17beta-hydroxysteroid dehydrogenase type 1 (type 1 17beta-HSD)-like, classical (c) SDRs

 Score = 58.6 bits (142), Expect = 3e-10
 Identities = 40/146 (27%), Positives = 65/146 (44%), Gaps = 13/146 (8%)

Query: 3   IVITGATSGIGTETARVLA---LRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELD 59
           ++ITG +SGIG   A  LA    +   V   +RD+     + E     +    ++ ++LD
Sbjct: 3   VLITGCSSGIGLHLAVRLASDPSKRFKVYATMRDLKKKGRLWEA-AGALAGGTLETLQLD 61

Query: 60  LSSLASVRNFASEYNIQHHQLNILINNAGI--MGTPFMLSKDNIELQFATNHLGHFLLTN 117
           +    SV        +    +++L+ NAG+  +G    LS+D +   F  N  G   +  
Sbjct: 62  VCDSKSVAAAVE--RVTERHVDVLVCNAGVGLLGPLEALSEDAMASVFDVNVFGTVRMLQ 119

Query: 118 LLLDTMKKTARKSGGEGRIINVSSEG 143
             L  MK+  R S   GRI+  SS G
Sbjct: 120 AFLPDMKR--RGS---GRILVTSSVG 140

17beta-hydroxysteroid dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens. This classical SDR subgroup includes human type 1 17beta-HSD, human retinol dehydrogenase 8, zebrafish photoreceptor associated retinol dehydrogenase type 2, and a chicken ovary-specific 17beta-hydroxysteroid dehydrogenase. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 258

>gnl|CDD|181334 PRK08263, PRK08263, short chain dehydrogenase; Provisional

 Score = 58.5 bits (142), Expect = 3e-10
 Identities = 57/206 (27%), Positives = 88/206 (42%), Gaps = 31/206 (15%)

Query: 5   ITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLA 64
           ITGA+ G G         RG  VV   RD A   D+ E         ++  + LD++  A
Sbjct: 8   ITGASRGFGRAWTEAALERGDRVVATARDTATLADLAEKY-----GDRLLPLALDVTDRA 62

Query: 65  SVRNFASEYNIQHH-QLNILINNAGIMGTPFM--LSKDNIELQFATNHLGHFLLTNLLLD 121
           +V   A E  ++H  +L+I++NNAG      +  +++     Q  TN  G   +T  +L 
Sbjct: 63  AVFA-AVETAVEHFGRLDIVVNNAGYGLFGMIEEVTESEARAQIDTNFFGALWVTQAVLP 121

Query: 122 TMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANILHAN 181
            +    R+    G II +SS G       GI        S +     Y  SK A    + 
Sbjct: 122 YL----REQRS-GHIIQISSIG-------GI--------SAFPMSGIYHASKWALEGMSE 161

Query: 182 ELARRLKEDGVDITANSVHPGAIATN 207
            LA+ + E G+ +T   V PG  +T+
Sbjct: 162 ALAQEVAEFGIKVTL--VEPGGYSTD 185

Length = 275

>gnl|CDD|187613 cd05355, SDR_c1, classical (c) SDR, subgroup 1

 Score = 58.5 bits (142), Expect = 4e-10
 Identities = 59/212 (27%), Positives = 85/212 (40%), Gaps = 35/212 (16%)

Query: 5   ITGATSGIGTETARVLALRGVHVVM----GVRDIAAGKDVKETIVKEIPSAKVDAMELDL 60
           ITG  SGIG   A   A  G  V +       D A  ++ K+ I  E    K   +  DL
Sbjct: 31  ITGGDSGIGRAVAIAFAREGADVAINYLPEEEDDA--EETKKLI--EEEGRKCLLIPGDL 86

Query: 61  SSLASVRNFASEYNIQHHQLNILINNAGIMGTPFML---SKDNIELQFATNHLGHFLLTN 117
              +  R+   E   +  +L+IL+NNA        +   + + +E  F TN    F LT 
Sbjct: 87  GDESFCRDLVKEVVKEFGKLDILVNNAAYQHPQESIEDITTEQLEKTFRTNIFSMFYLTK 146

Query: 118 LLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANI 177
             L  +KK +        IIN +S     AY            S +     Y+ +K A +
Sbjct: 147 AALPHLKKGS-------SIINTTS---VTAY----------KGSPH--LLDYAATKGAIV 184

Query: 178 LHANELARRLKEDGVDITANSVHPGAIATNII 209
                L+ +L E G  I  N+V PG I T +I
Sbjct: 185 AFTRGLSLQLAEKG--IRVNAVAPGPIWTPLI 214

These proteins are members of the classical SDR family, with a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 270

>gnl|CDD|235702 PRK06124, PRK06124, gluconate 5-dehydrogenase; Provisional

 Score = 58.2 bits (141), Expect = 4e-10
 Identities = 52/208 (25%), Positives = 89/208 (42%), Gaps = 32/208 (15%)

Query: 4   VITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSL 63
           ++TG+  G+G E AR LA  G HV++  R+ A  +     +     +A  +A+  D++  
Sbjct: 15  LVTGSARGLGFEIARALAGAGAHVLVNGRNAATLEAAVAALRAAGGAA--EALAFDIADE 72

Query: 64  ASVRNFASEYNIQHHQLNILINNAGIMGTPFM--LSKDNIELQFATNHLGHFLLTNLLLD 121
            +V    +  + +H +L+IL+NN G      +  L    I     T+ +   LL+ L   
Sbjct: 73  EAVAAAFARIDAEHGRLDILVNNVGARDRRPLAELDDAAIRALLETDLVAPILLSRLAAQ 132

Query: 122 TMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKIND---PSGYNGFRAYSQSKLANIL 178
            MK+      G GRII ++S   ++A        +  D   P+   G     ++      
Sbjct: 133 RMKR-----QGYGRIIAITSIAGQVA--------RAGDAVYPAAKQGLTGLMRAL----- 174

Query: 179 HANELARRLKEDGVDITANSVHPGAIAT 206
            A E           IT+N++ PG  AT
Sbjct: 175 -AAEFGPH------GITSNAIAPGYFAT 195

Length = 256

>gnl|CDD|181298 PRK08219, PRK08219, short chain dehydrogenase; Provisional

 Score = 57.6 bits (140), Expect = 5e-10
 Identities = 54/208 (25%), Positives = 86/208 (41%), Gaps = 43/208 (20%)

Query: 4   VITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSL 63
           +ITGA+ GIG   AR LA     +++G R      ++      E+P A      +DL+  
Sbjct: 7   LITGASRGIGAAIARELA-PTHTLLLGGRPAERLDELAA----ELPGAT--PFPVDLTDP 59

Query: 64  ASVRNFASEYNIQHHQLNILINNAGI--MGTPFMLSKDNIELQFATNHLGHFLLTNLLLD 121
            ++   A+        L++L++NAG+  +G     + D        N +    LT LLL 
Sbjct: 60  EAI---AAAVEQLGR-LDVLVHNAGVADLGPVAESTVDEWRATLEVNVVAPAELTRLLLP 115

Query: 122 TMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYN---GFRAYSQSKLANIL 178
            ++               ++ GH +          IN  +G     G+ +Y+ SK A  L
Sbjct: 116 ALR---------------AAHGHVVF---------INSGAGLRANPGWGSYAASKFA--L 149

Query: 179 HANELARRLKEDGVDITANSVHPGAIAT 206
            A   A R +E G  +   SVHPG   T
Sbjct: 150 RALADALREEEPGN-VRVTSVHPGRTDT 176

Length = 227

>gnl|CDD|187589 cd05328, 3alpha_HSD_SDR_c, alpha hydroxysteroid dehydrogenase (3alpha_HSD), classical (c) SDRs

 Score = 57.5 bits (139), Expect = 5e-10
 Identities = 60/221 (27%), Positives = 85/221 (38%), Gaps = 46/221 (20%)

Query: 3   IVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSS 62
           IVITGA SGIG  TA +L   G  V+        G D++E  V             DLS+
Sbjct: 2   IVITGAASGIGAATAELLEDAGHTVI--------GIDLREADVIA-----------DLST 42

Query: 63  LASVRN-FASEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLD 121
                   A         L+ L+N AG+ GT          L    N+ G   L   LL 
Sbjct: 43  PEGRAAAIADVLARCSGVLDGLVNCAGVGGTT------VAGLVLKVNYFGLRALMEALLP 96

Query: 122 TMKKTARKSGGEGRIINVSS------EGHRLAYHEGI------RFDKINDPSGYNGFRAY 169
            ++K     G     + VSS         +L   + +      R   + + +G  G+ AY
Sbjct: 97  RLRK-----GHGPAAVVVSSIAGAGWAQDKLELAKALAAGTEARAVALAEHAGQPGYLAY 151

Query: 170 SQSKLANILHANELARR-LKEDGVDITANSVHPGAIATNII 209
           + SK A  +     A   L   GV +  N+V PG + T I+
Sbjct: 152 AGSKEALTVWTRRRAATWLYGAGVRV--NTVAPGPVETPIL 190

Bacterial 3-alpha_HSD, which catalyzes the NAD-dependent oxidoreduction of hydroxysteroids, is a dimeric member of the classical SDR family. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250

>gnl|CDD|235925 PRK07067, PRK07067, sorbitol dehydrogenase; Provisional

 Score = 57.7 bits (140), Expect = 5e-10
 Identities = 40/147 (27%), Positives = 63/147 (42%), Gaps = 17/147 (11%)

Query: 4   VITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSL 63
           ++TGA SGIG   A      G  VV+     A  +     I          A+ LD++  
Sbjct: 10  LLTGAASGIGEAVAERYLAEGARVVIADIKPARARLAALEI-----GPAAIAVSLDVTRQ 64

Query: 64  ASVRNFASEYNIQHHQLNILINNAGI--MGTPFMLSKDNIELQFATNHLGHFLLTNLLLD 121
            S+    +    +   ++IL NNA +  M     +S+D+ +  FA N  G F        
Sbjct: 65  DSIDRIVAAAVERFGGIDILFNNAALFDMAPILDISRDSYDRLFAVNVKGLFF------- 117

Query: 122 TMKKTAR---KSGGEGRIINVSSEGHR 145
            M+  AR   + G  G+IIN++S+  R
Sbjct: 118 LMQAVARHMVEQGRGGKIINMASQAGR 144

Length = 257

>gnl|CDD|187597 cd05338, DHRS1_HSDL2-like_SDR_c, human dehydrogenase/reductase (SDR family) member 1 (DHRS1) and human hydroxysteroid dehydrogenase-like protein 2 (HSDL2), classical (c) SDRs

 Score = 57.4 bits (139), Expect = 6e-10
 Identities = 57/219 (26%), Positives = 83/219 (37%), Gaps = 41/219 (18%)

Query: 4   VITGATSGIGTETARVLALRGVHVVMGVR-----DIAAGKDVKETI---VKEIPSAKVDA 55
            +TGA+ GIG   A  LA  G  VV+  +     D  + K +  TI    +EI +A   A
Sbjct: 7   FVTGASRGIGRAIALRLAKAGATVVVAAKTASEGDNGSAKSLPGTIEETAEEIEAAGGQA 66

Query: 56  M--ELDLSSLASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQFATNHL--G 111
           +   +D+     VR        Q  +L+IL+NNAG +    +                 G
Sbjct: 67  LPIVVDVRDEDQVRALVEATVDQFGRLDILVNNAGAIWLSLVEDTPAKRFDLMQRVNLRG 126

Query: 112 HFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFR---A 168
            +LL+   L  M K      G+G I+N+S                   P      R   A
Sbjct: 127 TYLLSQAALPHMVKA-----GQGHILNISP------------------PLSLRPARGDVA 163

Query: 169 YSQSKLANILHANELARRLKEDGVDITANSVHPG-AIAT 206
           Y+  K         LA  L+  G+ +  NS+ P  AI T
Sbjct: 164 YAAGKAGMSRLTLGLAAELRRHGIAV--NSLWPSTAIET 200

This subgroup includes human DHRS1 and human HSDL2 and related proteins. These are members of the classical SDR family, with a canonical Gly-rich NAD-binding motif and the typical YXXXK active site motif. However, the rest of the catalytic tetrad is not strongly conserved. DHRS1 mRNA has been detected in many tissues, liver, heart, skeletal muscle, kidney and pancreas; a longer transcript is predominantly expressed in the liver , a shorter one in the heart. HSDL2 may play a part in fatty acid metabolism, as it is found in peroxisomes. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 246

>gnl|CDD|180822 PRK07069, PRK07069, short chain dehydrogenase; Validated

 Score = 57.4 bits (139), Expect = 6e-10
 Identities = 53/220 (24%), Positives = 87/220 (39%), Gaps = 31/220 (14%)

Query: 5   ITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVD----AMELDL 60
           ITGA  G+G   AR +A +G  V   + DI       +    EI +A  +    A   D+
Sbjct: 4   ITGAAGGLGRAIARRMAEQGAKVF--LTDINDA-AGLDAFAAEINAAHGEGVAFAAVQDV 60

Query: 61  SSLASVRNFASEYNIQHHQLNILINNAGI--MGTPFMLSKDNIELQFATNHLGHFLLTNL 118
           +  A  +   ++       L++L+NNAG+   G    +  D      A N    FL    
Sbjct: 61  TDEAQWQALLAQAADAMGGLSVLVNNAGVGSFGAIEQIELDEWRRVMAINVESIFLGCKH 120

Query: 119 LLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANIL 178
            L  +     ++     I+N+SS     A  +               + AY+ SK A   
Sbjct: 121 ALPYL-----RASQPASIVNISSVAAFKAEPD---------------YTAYNASKAAVAS 160

Query: 179 HANELARRLKEDGVDITANSVHPGAIATNIIRHNSLFRSM 218
               +A      G+D+  NS+HP  I T I+  + +F+ +
Sbjct: 161 LTKSIALDCARRGLDVRCNSIHPTFIRTGIV--DPIFQRL 198

Length = 251

>gnl|CDD|180802 PRK07035, PRK07035, short chain dehydrogenase; Provisional

 Score = 57.3 bits (139), Expect = 7e-10
 Identities = 55/209 (26%), Positives = 89/209 (42%), Gaps = 33/209 (15%)

Query: 4   VITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSL 63
           ++TGA+ GIG   A++LA +G HV++  R +   + V + IV      K +A+   +  +
Sbjct: 12  LVTGASRGIGEAIAKLLAQQGAHVIVSSRKLDGCQAVADAIVAA--GGKAEALACHIGEM 69

Query: 64  ASVRNFASEYNIQHHQLNILINNAGIMGTPF---MLSKDNIELQ--FATNHLGHFLLTNL 118
             +    +    +H +L+IL+NNA     P+   +L  D    Q     N  G+F ++  
Sbjct: 70  EQIDALFAHIRERHGRLDILVNNAA--ANPYFGHILDTDLGAFQKTVDVNIRGYFFMSVE 127

Query: 119 LLDTMKKTARKSGGEGRIINVSS-EGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANI 177
               MK+      G G I+NV+S  G      +GI                YS +K A I
Sbjct: 128 AGKLMKE-----QGGGSIVNVASVNGVSPGDFQGI----------------YSITKAAVI 166

Query: 178 LHANELARRLKEDGVDITANSVHPGAIAT 206
                 A+     G  I  N++ PG   T
Sbjct: 167 SMTKAFAKECAPFG--IRVNALLPGLTDT 193

Length = 252

>gnl|CDD|236190 PRK08220, PRK08220, 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated

 Score = 57.2 bits (139), Expect = 8e-10
 Identities = 38/139 (27%), Positives = 57/139 (41%), Gaps = 18/139 (12%)

Query: 5   ITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLA 64
           +TGA  GIG   A      G  V+        G D      ++ P        LD+S  A
Sbjct: 13  VTGAAQGIGYAVALAFVEAGAKVI--------GFDQAFLTQEDYP---FATFVLDVSDAA 61

Query: 65  SVRNFASEYNIQHHQLNILINNAGI--MGTPFMLSKDNIELQFATNHLGHFLLTNLLLDT 122
           +V         +   L++L+N AGI  MG    LS ++ +  FA N  G F L   ++  
Sbjct: 62  AVAQVCQRLLAETGPLDVLVNAAGILRMGATDSLSDEDWQQTFAVNAGGAFNLFRAVMPQ 121

Query: 123 MKKTARKSGGEGRIINVSS 141
            +   ++SG    I+ V S
Sbjct: 122 FR--RQRSGA---IVTVGS 135

Length = 252

>gnl|CDD|187633 cd08928, KR_fFAS_like_SDR_c_like, ketoacyl reductase (KR) domain of fungal-type fatty acid synthase (fFAS)-like, classical (c)-like SDRs

 Score = 57.3 bits (138), Expect = 9e-10
 Identities = 36/210 (17%), Positives = 66/210 (31%), Gaps = 21/210 (10%)

Query: 3   IVITGATSG-IGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLS 61
           ++ITGA  G IG E  + L   G  V +     +         +     A    + +   
Sbjct: 1   VLITGAGDGSIGAEVLQGLLNGGAKVYVTTSRFSRQVTKYYQDIYAACGAAGSVLIVVPF 60

Query: 62  SLASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDN---IELQFATNHLGHFLLTNL 118
           +  S ++  +     +  +N L      +  PF    +    I    + + + H ++   
Sbjct: 61  NQGSKQDVEALAIGIYDTVNGLGW-DLDLYGPFAAIPETGIEIPAIDSKSEVAHRIMLTN 119

Query: 119 LLDTMKKTARKSGGEGRIINVSSEGHRL--AYHEGIRFDKINDPSGYNGFRAYSQSKLAN 176
           LL               ++ +  +         + I     N  + +    AYS+SKL  
Sbjct: 120 LLRPK-----------GLVKIQKQLRGQETRPAQVILPFSPNHGT-FGDDGAYSESKLHL 167

Query: 177 ILHANELARRLKEDGVDITANSVHPGAIAT 206
               N  A      G D+T    H G    
Sbjct: 168 ETLFNRWASESW--GNDLTVCGAHIGWTRG 195

KR domain of FAS, including the fungal-type multidomain FAS alpha chain, and the single domain daunorubicin C-13 ketoreductase. Fungal-type FAS is a heterododecameric FAS composed of alpha and beta multifunctional polypeptide chains. The KR, an SDR family member is located centrally in the alpha chain. KR catalyzes the NADP-dependent reduction of ketoacyl-ACP to hydroxyacyl-ACP. KR shares the critical active site Tyr of the classical SDR and has partial identity of the active site tetrad, but the upstream Asn is replaced in KR by Met. As in other SDRs, there is a glycine rich NAD(P)-binding motif, but the pattern found in KR does not match the classical SDRs, and is not strictly conserved within this group. Daunorubicin is a clinically important therapeutic compound used in some cancer treatments. Single domain daunorubicin C-13 ketoreductase is member of the classical SDR family with a canonical glycine-rich NAD(P)-binding motif, but lacking a complete match to the active site tetrad characteristic of this group. The critical Tyr, plus the Lys and upstream Asn are present, but the catalytic Ser is replaced, generally by Gln. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type KRs have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 248

>gnl|CDD|187648 cd08944, SDR_c12, classical (c) SDR, subgroup 12

 Score = 57.1 bits (138), Expect = 9e-10
 Identities = 61/213 (28%), Positives = 87/213 (40%), Gaps = 36/213 (16%)

Query: 4   VITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVD-AMELDLSS 62
           ++TGA +GIG   A  LA  G  VV+   D  A + V   I     + +VD   E  +++
Sbjct: 7   IVTGAGAGIGAACAARLAREGARVVVADIDGGAAQAVVAQIAGGALALRVDVTDEQQVAA 66

Query: 63  L--ASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIEL---QFATNHLGHFLLTN 117
           L   +V  F          L++L+NNAG M     +   ++ +     A N  G FL   
Sbjct: 67  LFERAVEEFGG--------LDLLVNNAGAMHLTPAIIDTDLAVWDQTMAINLRGTFLCCR 118

Query: 118 LLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANI 177
                M       GG G I+N+SS               I   SG  G+ AY  SK A  
Sbjct: 119 HAAPRM----IARGG-GSIVNLSS---------------IAGQSGDPGYGAYGASKAAIR 158

Query: 178 LHANELARRLKEDGVDITANSVHPGAIATNIIR 210
                LA  L+  G  I  N++ PG I T ++ 
Sbjct: 159 NLTRTLAAELRHAG--IRCNALAPGLIDTPLLL 189

These are classical SDRs, with the canonical active site tetrad and glycine-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 246

>gnl|CDD|236372 PRK09072, PRK09072, short chain dehydrogenase; Provisional

 Score = 57.3 bits (139), Expect = 9e-10
 Identities = 53/200 (26%), Positives = 80/200 (40%), Gaps = 42/200 (21%)

Query: 3   IVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIP-SAKVDAMELDLS 61
           +++TGA+ GIG   A  LA  G  +++  R+        E +   +P   +   +  DL+
Sbjct: 8   VLLTGASGGIGQALAEALAAAGARLLLVGRNAEK----LEALAARLPYPGRHRWVVADLT 63

Query: 62  S---LASVRNFASEYNIQHHQLNILINNAGIMGTPFML----SKDNIELQFATNHLGHFL 114
           S     +V   A     +   +N+LINNAG+    F L      + IE   A N      
Sbjct: 64  SEAGREAVLARAR----EMGGINVLINNAGV--NHFALLEDQDPEAIERLLALNLTAPMQ 117

Query: 115 LTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKL 174
           LT  LL  ++           ++NV S            F  I    GY G+ +Y  SK 
Sbjct: 118 LTRALLPLLRAQ-----PSAMVVNVGST-----------FGSI----GYPGYASYCASKF 157

Query: 175 ANILH--ANELARRLKEDGV 192
           A  L   +  L R L + GV
Sbjct: 158 A--LRGFSEALRRELADTGV 175

Length = 263

>gnl|CDD|235693 PRK06077, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 57.0 bits (138), Expect = 1e-09
 Identities = 60/221 (27%), Positives = 97/221 (43%), Gaps = 34/221 (15%)

Query: 3   IVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETI--VKEIPSAKVDAMELDL 60
           +V+TG+  GIG   A  LA  G  VV+  +  A  +++ ET+  VKE     +  +  D+
Sbjct: 9   VVVTGSGRGIGRAIAVRLAKEGSLVVVNAKKRA--EEMNETLKMVKENGGEGIGVLA-DV 65

Query: 61  SSLASVRNFASEYNIQHHQLNILINNAGI-MGTPFMLSKDN-IELQFATNHLGHFLLTNL 118
           S+       A     ++   +IL+NNAG+ + +PF+   D  I+   +T+       +  
Sbjct: 66  STREGCETLAKATIDRYGVADILVNNAGLGLFSPFLNVDDKLIDKHISTDFKSVIYCSQE 125

Query: 119 LLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANIL 178
           L   M++     GG   I+N++S    +A   GIR      P    G   Y   K A I 
Sbjct: 126 LAKEMRE-----GGA--IVNIAS----VA---GIR------P--AYGLSIYGAMKAAVIN 163

Query: 179 HANELARRLKEDGVDITANSVHPGAIATNIIRHNSLFRSMN 219
               LA  L      I  N++ PG + T +    SLF+ + 
Sbjct: 164 LTKYLALELAP---KIRVNAIAPGFVKTKL--GESLFKVLG 199

Length = 252

>gnl|CDD|181305 PRK08226, PRK08226, short chain dehydrogenase; Provisional

 Score = 57.1 bits (138), Expect = 1e-09
 Identities = 52/207 (25%), Positives = 92/207 (44%), Gaps = 30/207 (14%)

Query: 4   VITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEI--PSAKVDAMELDLS 61
           +ITGA  GIG   ARV A  G ++++    +    ++++    E+     +  A+  D+ 
Sbjct: 10  LITGALQGIGEGIARVFARHGANLIL----LDISPEIEKL-ADELCGRGHRCTAVVADVR 64

Query: 62  SLASVRNFASEYNIQHHQLNILINNAGIMG-TPFM-LSKDNIELQFATNHLGHFLLTNLL 119
             ASV         +  +++IL+NNAG+     F+ +S ++ +     N  G + +T  +
Sbjct: 65  DPASVAAAIKRAKEKEGRIDILVNNAGVCRLGSFLDMSDEDRDFHIDINIKGVWNVTKAV 124

Query: 120 LDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANILH 179
           L  M         +GRI+ +SS          +  D + DP    G  AY+ +K A +  
Sbjct: 125 LPEMIAR-----KDGRIVMMSS----------VTGDMVADP----GETAYALTKAAIVGL 165

Query: 180 ANELARRLKEDGVDITANSVHPGAIAT 206
              LA    + G  I  N++ PG + T
Sbjct: 166 TKSLAVEYAQSG--IRVNAICPGYVRT 190

Length = 263

>gnl|CDD|187609 cd05351, XR_like_SDR_c, xylulose reductase-like, classical (c) SDRs

 Score = 56.7 bits (137), Expect = 1e-09
 Identities = 55/217 (25%), Positives = 92/217 (42%), Gaps = 41/217 (18%)

Query: 3   IVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSS 62
            ++TGA  GIG  T + LA  G  VV   R  A   D+ +++V+E P   ++ + +DLS 
Sbjct: 10  ALVTGAGKGIGRATVKALAKAGARVVAVSRTQA---DL-DSLVRECPG--IEPVCVDLSD 63

Query: 63  LASVRNFASEYNIQHHQLNILINNAGI-MGTPFM-LSKDNIELQFATNHLGHFLLTNLLL 120
             +      E       +++L+NNA + +  PF+ ++K+  +  F  N      ++ ++ 
Sbjct: 64  WDATE----EALGSVGPVDLLVNNAAVAILQPFLEVTKEAFDRSFDVNVRAVIHVSQIVA 119

Query: 121 DTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLA----N 176
             M   AR   G   I+NVSS+  + A                     Y  +K A     
Sbjct: 120 RGMI--ARGVPGS--IVNVSSQASQRA---------------LTNHTVYCSTKAALDMLT 160

Query: 177 ILHANELARRLKEDGVDITANSVHPGAIATNIIRHNS 213
            + A EL          I  NSV+P  + T++ R N 
Sbjct: 161 KVMALELGPH------KIRVNSVNPTVVMTDMGRDNW 191

Members of this subgroup include proteins identified as L-xylulose reductase (XR) and carbonyl reductase; they are members of the SDR family. XR, catalyzes the NADP-dependent reduction of L-xyulose and other sugars. Tetrameric mouse carbonyl reductase is involved in the metabolism of biogenic and xenobiotic carbonyl compounds. This subgroup also includes tetrameric chicken liver D-erythrulose reductase, which catalyzes the reduction of D-erythrulose to D-threitol. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Length = 244

>gnl|CDD|236399 PRK09186, PRK09186, flagellin modification protein A; Provisional

 Score = 56.5 bits (137), Expect = 1e-09
 Identities = 55/215 (25%), Positives = 96/215 (44%), Gaps = 27/215 (12%)

Query: 3   IVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSS 62
           I+ITGA   IG+   + +   G  V+    D  A  ++ E++ KE  S K+  +ELD++ 
Sbjct: 7   ILITGAGGLIGSALVKAILEAGGIVIAADIDKEALNELLESLGKEFKSKKLSLVELDITD 66

Query: 63  LASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIEL-QFATN---HLGHFLLTNL 118
             S+  F S+   ++ +++  +N A      +     ++ L  F  N   HLG   L   
Sbjct: 67  QESLEEFLSKSAEKYGKIDGAVNCAYPRNKDYGKKFFDVSLDDFNENLSLHLGSSFL--- 123

Query: 119 LLDTMKKTAR--KSGGEGRIINVSSEGHRLAYHEGI---RFDKINDPSGYNGFRAYSQSK 173
                ++ A+  K  G G ++N+SS         G+   +F+     S  +    Y+  K
Sbjct: 124 ---FSQQFAKYFKKQGGGNLVNISSI-------YGVVAPKFEIYEGTSMTSPVE-YAAIK 172

Query: 174 LANILHANE-LARRLKEDGVDITANSVHPGAIATN 207
            A I+H  + LA+  K+  + +  N V PG I  N
Sbjct: 173 -AGIIHLTKYLAKYFKDSNIRV--NCVSPGGILDN 204

Length = 256

>gnl|CDD|180723 PRK06841, PRK06841, short chain dehydrogenase; Provisional

 Score = 56.6 bits (137), Expect = 1e-09
 Identities = 46/205 (22%), Positives = 82/205 (40%), Gaps = 29/205 (14%)

Query: 4   VITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSL 63
           V+TG  SGIG   A + A +G  V +  R      +V   ++          +  D+S  
Sbjct: 19  VVTGGASGIGHAIAELFAAKGARVALLDRS-EDVAEVAAQLL----GGNAKGLVCDVSDS 73

Query: 64  ASVRNFASEYNIQHHQLNILINNAGI--MGTPFMLSKDNIELQFATNHLGHFLLTNLLLD 121
            SV    +       +++IL+N+AG+  +     +S+++ +     N  G FL+   +  
Sbjct: 74  QSVEAAVAAVISAFGRIDILVNSAGVALLAPAEDVSEEDWDKTIDINLKGSFLMAQAVGR 133

Query: 122 TMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANILHAN 181
            M        G G+I+N++S+   +A    +               AY  SK   +    
Sbjct: 134 HMIAA-----GGGKIVNLASQAGVVALERHV---------------AYCASKAGVVGMTK 173

Query: 182 ELARRLKEDGVDITANSVHPGAIAT 206
            LA  L+     IT N++ P  + T
Sbjct: 174 VLA--LEWGPYGITVNAISPTVVLT 196

Length = 255

>gnl|CDD|187638 cd08933, RDH_SDR_c, retinal dehydrogenase-like, classical (c) SDR

 Score = 56.4 bits (136), Expect = 2e-09
 Identities = 34/143 (23%), Positives = 65/143 (45%), Gaps = 12/143 (8%)

Query: 3   IVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSS 62
           +++TG + GIG    R     G  VV   R  AAG+ ++  + +  P +    +  D++ 
Sbjct: 12  VIVTGGSRGIGRGIVRAFVENGAKVVFCARGEAAGQALESELNRAGPGSCK-FVPCDVTK 70

Query: 63  LASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQFAT----NHLGHFLLTNL 118
              ++   S    +  +++ L+NNAG    P   + +    +F      N + +FL +  
Sbjct: 71  EEDIKTLISVTVERFGRIDCLVNNAG-WHPPHQTTDETSAQEFRDLLNLNLISYFLASKY 129

Query: 119 LLDTMKKTARKSGGEGRIINVSS 141
            L  ++K+      +G IIN+SS
Sbjct: 130 ALPHLRKS------QGNIINLSS 146

These classical SDRs includes members identified as retinol dehydrogenases, which convert retinol to retinal, a property that overlaps with 17betaHSD activity. 17beta-dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens, and include members of the short-chain dehydrogenases/reductase family. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 261

>gnl|CDD|235703 PRK06125, PRK06125, short chain dehydrogenase; Provisional

 Score = 56.2 bits (136), Expect = 2e-09
 Identities = 60/221 (27%), Positives = 92/221 (41%), Gaps = 39/221 (17%)

Query: 3   IVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSS 62
           ++ITGA+ GIG   A   A  G H+ +  RD  A + +   +        V    LDLSS
Sbjct: 10  VLITGASKGIGAAAAEAFAAEGCHLHLVARDADALEALAADLRAAHG-VDVAVHALDLSS 68

Query: 63  LASVRNFASEYNIQHHQLNILINNAG-IMGTPFMLSKDNIELQ-----FATNHLGHFLLT 116
             +    A+E       ++IL+NNAG I G       D+++       +     G+  LT
Sbjct: 69  PEAREQLAAEAG----DIDILVNNAGAIPGGGL----DDVDDAAWRAGWELKVFGYIDLT 120

Query: 117 NLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLAN 176
            L    MK  AR   G G I+NV          E    D I   +G     A++++    
Sbjct: 121 RLAYPRMK--AR---GSGVIVNVIGAA-----GENPDADYICGSAGNAALMAFTRA---- 166

Query: 177 ILHANELARRLKEDGVDITANSVHPGAIATNIIRHNSLFRS 217
                 L  +  +DGV +    V+PG +AT+  R  +L + 
Sbjct: 167 ------LGGKSLDDGVRVVG--VNPGPVATD--RMLTLLKG 197

Length = 259

>gnl|CDD|187590 cd05329, TR_SDR_c, tropinone reductase-I and II (TR-1, and TR-II)-like, classical (c) SDRs

 Score = 55.9 bits (135), Expect = 3e-09
 Identities = 58/211 (27%), Positives = 85/211 (40%), Gaps = 33/211 (15%)

Query: 5   ITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSA--KVDAMELDLSS 62
           +TG T GIG      LA  G  V    R+    K++ E  + E      KV+    D+SS
Sbjct: 11  VTGGTKGIGYAIVEELAGLGAEVYTCARN---QKELDE-CLTEWREKGFKVEGSVCDVSS 66

Query: 63  LASVRNFASEYNIQHH--QLNILINNAG--IMGTPFMLSKDNIELQFATNHLGHFLLTNL 118
             S R    +    H   +LNIL+NNAG  I       ++++  L  +TN    + L+ L
Sbjct: 67  -RSERQELMDTVASHFGGKLNILVNNAGTNIRKEAKDYTEEDYSLIMSTNFEAAYHLSRL 125

Query: 119 LLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANIL 178
               +K +       G I+ +SS    +A            PSG      Y  +K A   
Sbjct: 126 AHPLLKASGN-----GNIVFISSVAGVIAV-----------PSG----APYGATKGALNQ 165

Query: 179 HANELARRLKEDGVDITANSVHPGAIATNII 209
               LA    +D   I  N+V P  IAT ++
Sbjct: 166 LTRSLACEWAKDN--IRVNAVAPWVIATPLV 194

This subgroup includes TR-I and TR-II; these proteins are members of the SDR family. TRs catalyze the NADPH-dependent reductions of the 3-carbonyl group of tropinone, to a beta-hydroxyl group. TR-I and TR-II produce different stereoisomers from tropinone, TR-I produces tropine (3alpha-hydroxytropane), and TR-II, produces pseudotropine (sigma-tropine, 3beta-hydroxytropane). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 251

>gnl|CDD|135765 PRK06113, PRK06113, 7-alpha-hydroxysteroid dehydrogenase; Validated

 Score = 55.6 bits (134), Expect = 3e-09
 Identities = 61/209 (29%), Positives = 91/209 (43%), Gaps = 33/209 (15%)

Query: 4   VITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSA--KVDAMELDLS 61
           +ITGA +GIG E A   A  G  VV  V DI A  D    +V EI     +  A   D++
Sbjct: 15  IITGAGAGIGKEIAITFATAGASVV--VSDINA--DAANHVVDEIQQLGGQAFACRCDIT 70

Query: 62  SLASVRNFASEYNIQHHQLNILINNAGIMG-TPFMLSKDNIELQFATNHLGHFLLTNLLL 120
           S   +   A     +  +++IL+NNAG  G  PF +   +    +  N    F L+ L+ 
Sbjct: 71  SEQELSALADFALSKLGKVDILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVA 130

Query: 121 DTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANILHA 180
             M+K      G G I+ ++S     A ++ I               +Y+ SK A    A
Sbjct: 131 PEMEK-----NGGGVILTITSMA---AENKNIN------------MTSYASSKAA----A 166

Query: 181 NELARRLKED--GVDITANSVHPGAIATN 207
           + L R +  D    +I  N + PGAI T+
Sbjct: 167 SHLVRNMAFDLGEKNIRVNGIAPGAILTD 195

Length = 255

>gnl|CDD|236207 PRK08261, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 56.0 bits (136), Expect = 4e-09
 Identities = 64/212 (30%), Positives = 88/212 (41%), Gaps = 43/212 (20%)

Query: 4   VITGATSGIGTETARVLALRGVHVVMGVRDI-AAGKDVKETIVKEIPSAKVDAMELDLSS 62
           ++TGA  GIG   A VLA  G HVV    D+ AAG+ +       +      A+ LD+++
Sbjct: 214 LVTGAARGIGAAIAEVLARDGAHVV--CLDVPAAGEALAAV-ANRV---GGTALALDITA 267

Query: 63  LASVRNFASEYNIQHHQLNILINNAGI--------MGTPFMLSKDNIELQFATNHLGHFL 114
             +    A     +H  L+I+++NAGI        M       +   +   A N L    
Sbjct: 268 PDAPARIAEHLAERHGGLDIVVHNAGITRDKTLANM------DEARWDSVLAVNLLAPLR 321

Query: 115 LTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKL 174
           +T  LL      A   G  GRI+ VSS               I+  +G  G   Y+ SK 
Sbjct: 322 ITEALLA-----AGALGDGGRIVGVSS---------------ISGIAGNRGQTNYAASKA 361

Query: 175 ANILHANELARRLKEDGVDITANSVHPGAIAT 206
             I     LA  L E G  IT N+V PG I T
Sbjct: 362 GVIGLVQALAPLLAERG--ITINAVAPGFIET 391

Length = 450

>gnl|CDD|183832 PRK12935, PRK12935, acetoacetyl-CoA reductase; Provisional

 Score = 55.0 bits (132), Expect = 4e-09
 Identities = 56/210 (26%), Positives = 90/210 (42%), Gaps = 29/210 (13%)

Query: 4   VITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPS--AKVDAMELDLS 61
           ++TG   GIG      LA  G  VV+   +  + K+  E +V E+      V A++ D+S
Sbjct: 10  IVTGGAKGIGKAITVALAQEGAKVVI---NYNSSKEAAENLVNELGKEGHDVYAVQADVS 66

Query: 62  SLASVRNFASEYNIQHHQLNILINNAGIM--GTPFMLSKDNIELQFATNHLGHFLLTNLL 119
            +        E      +++IL+NNAGI    T   L++++ E     N    F  T+ +
Sbjct: 67  KVEDANRLVEEAVNHFGKVDILVNNAGITRDRTFKKLNREDWERVIDVNLSSVFNTTSAV 126

Query: 120 LDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANILH 179
           L  + +       EGRII++SS               I   +G  G   YS +K   +  
Sbjct: 127 LPYITEAE-----EGRIISISS---------------IIGQAGGFGQTNYSAAKAGMLGF 166

Query: 180 ANELARRLKEDGVDITANSVHPGAIATNII 209
              LA  L +  V  T N++ PG I T ++
Sbjct: 167 TKSLALELAKTNV--TVNAICPGFIDTEMV 194

Length = 247

>gnl|CDD|183718 PRK12746, PRK12746, short chain dehydrogenase; Provisional

 Score = 54.7 bits (131), Expect = 7e-09
 Identities = 64/215 (29%), Positives = 94/215 (43%), Gaps = 37/215 (17%)

Query: 4   VITGATSGIGTETARVLALRGVHVVM--GVRDIAAGKDVKETIVKEIPSAKVDAMELDLS 61
           ++TGA+ GIG   A  LA  G  V +  G    AA + ++E    E    K   +E DL+
Sbjct: 10  LVTGASRGIGRAIAMRLANDGALVAIHYGRNKQAADETIREI---ESNGGKAFLIEADLN 66

Query: 62  SLASVRNFASEYN------IQHHQLNILINNAGI--MGTPFMLSKDNIELQFATNHLGHF 113
           S+  V+    +        +   +++IL+NNAGI   GT    +++  +   A N    F
Sbjct: 67  SIDGVKKLVEQLKNELQIRVGTSEIDILVNNAGIGTQGTIENTTEEIFDEIMAVNIKAPF 126

Query: 114 LLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSK 173
            L    L  ++        EGR+IN+SS   RL               G+ G  AY  SK
Sbjct: 127 FLIQQTLPLLR-------AEGRVINISSAEVRL---------------GFTGSIAYGLSK 164

Query: 174 LANILHANELARRLKEDGVDITANSVHPGAIATNI 208
            A       LA+ L E G  IT N++ PG   T+I
Sbjct: 165 GALNTMTLPLAKHLGERG--ITVNTIMPGYTKTDI 197

Length = 254

>gnl|CDD|183489 PRK12384, PRK12384, sorbitol-6-phosphate dehydrogenase; Provisional

 Score = 54.7 bits (132), Expect = 7e-09
 Identities = 51/209 (24%), Positives = 79/209 (37%), Gaps = 39/209 (18%)

Query: 4   VITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSL 63
           V+ G    +G      LA  G  V +   +     +V + I  E           D +S 
Sbjct: 6   VVIGGGQTLGAFLCHGLAEEGYRVAVADINSEKAANVAQEINAEYGEGMAYGFGADATSE 65

Query: 64  ASVRNFASEYNIQHHQLNILINNAGIMG----TPFMLSKDNIELQFATNHLGHFLLTNLL 119
            SV   +   +    ++++L+ NAGI      T F L   +  LQ   N +G+FL     
Sbjct: 66  QSVLALSRGVDEIFGRVDLLVYNAGIAKAAFITDFQLGDFDRSLQ--VNLVGYFL----- 118

Query: 120 LDTMKKTAR---KSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFR---AYSQSK 173
               ++ +R   + G +GRII                  +IN  SG  G +    YS +K
Sbjct: 119 --CAREFSRLMIRDGIQGRII------------------QINSKSGKVGSKHNSGYSAAK 158

Query: 174 LANILHANELARRLKEDGVDITANSVHPG 202
              +     LA  L E G  IT +S+  G
Sbjct: 159 FGGVGLTQSLALDLAEYG--ITVHSLMLG 185

Length = 259

>gnl|CDD|187646 cd08942, RhlG_SDR_c, RhlG and related beta-ketoacyl reductases, classical (c) SDRs

 Score = 54.0 bits (130), Expect = 1e-08
 Identities = 53/213 (24%), Positives = 88/213 (41%), Gaps = 26/213 (12%)

Query: 3   IVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSS 62
           +++TG + GIG   A+     G  V++  R   A  D  E +       +  A+  DLSS
Sbjct: 9   VLVTGGSRGIGRMIAQGFLEAGARVIISARKAEACADAAEELSA---YGECIAIPADLSS 65

Query: 63  LASVRNFASEYNIQHHQLNILINNAGIM-GTPF-MLSKDNIELQFATNHLGHFLLTNLLL 120
              +    +    +  +L++L+NNAG   G P     +   +     N    F LT  LL
Sbjct: 66  EEGIEALVARVAERSDRLDVLVNNAGATWGAPLEAFPESGWDKVMDINVKSVFFLTQALL 125

Query: 121 DTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANILHA 180
             ++  A  +    R+IN+ S         GI        SG   + +Y  SK A  +H 
Sbjct: 126 PLLRAAA-TAENPARVINIGSI-------AGIVV------SGLENY-SYGASKAA--VH- 167

Query: 181 NELARRLKEDGVD--ITANSVHPGAIATNIIRH 211
            +L R+L ++     IT N++ PG   + +   
Sbjct: 168 -QLTRKLAKELAGEHITVNAIAPGRFPSKMTAF 199

Pseudomonas aeruginosa RhlG is an SDR-family beta-ketoacyl reductase involved in Rhamnolipid biosynthesis. RhlG is similar to but distinct from the FabG family of beta-ketoacyl-acyl carrier protein (ACP) of type II fatty acid synthesis. RhlG and related proteins are classical SDRs, with a canonical active site tetrad and glycine-rich NAD(P)-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250

>gnl|CDD|188170 TIGR01832, kduD, 2-deoxy-D-gluconate 3-dehydrogenase

 Score = 54.0 bits (130), Expect = 1e-08
 Identities = 58/215 (26%), Positives = 93/215 (43%), Gaps = 43/215 (20%)

Query: 3   IVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVK-EIPSAKVDAMELDLS 61
            ++TGA +G+G   A  LA  G  +V      A   +  ET  + E    +  ++  DLS
Sbjct: 8   ALVTGANTGLGQGIAVGLAEAGADIVG-----AGRSEPSETQQQVEALGRRFLSLTADLS 62

Query: 62  SLASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNL--- 118
            + +++        +   ++IL+NNAGI+       +     +F+       +  NL   
Sbjct: 63  DIEAIKALVDSAVEEFGHIDILVNNAGII-------RRADAEEFSEKDWDDVMNVNLKSV 115

Query: 119 --LLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSK--L 174
             L     K   K G  G+IIN++S    L++  GIR      PS       Y+ SK  +
Sbjct: 116 FFLTQAAAKHFLKQGRGGKIINIAS---MLSFQGGIRV-----PS-------YTASKHAV 160

Query: 175 ANI--LHANELARRLKEDGVDITANSVHPGAIATN 207
           A +  L ANE A +       I  N++ PG +ATN
Sbjct: 161 AGLTKLLANEWAAK------GINVNAIAPGYMATN 189

This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation [Energy metabolism, Biosynthesis and degradation of polysaccharides]. Length = 248

>gnl|CDD|187623 cd05365, 7_alpha_HSDH_SDR_c, 7 alpha-hydroxysteroid dehydrogenase (7 alpha-HSDH), classical (c) SDRs

 Score = 53.7 bits (129), Expect = 1e-08
 Identities = 58/210 (27%), Positives = 83/210 (39%), Gaps = 35/210 (16%)

Query: 4   VITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSA--KVDAMELDLS 61
           ++TG  +GIG   A  LA  G  VV  + D+ +  +  E +   I  A  +   +E +++
Sbjct: 3   IVTGGAAGIGKAIAGTLAKAGASVV--IADLKS--EGAEAVAAAIQQAGGQAIGLECNVT 58

Query: 62  SLASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQFAT----NHLGHFLLTN 117
           S   +         Q   + IL+NNAG  G P        E  F      N    F L+ 
Sbjct: 59  SEQDLEAVVKATVSQFGGITILVNNAG-GGGPKPFDMPMTEEDFEWAFKLNLFSAFRLSQ 117

Query: 118 LLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLA-N 176
           L    M+K      G G I+N+SS                N         AY  SK A N
Sbjct: 118 LCAPHMQKA-----GGGAILNISS------------MSSEN--KNVR-IAAYGSSKAAVN 157

Query: 177 ILHANELARRLKEDGVDITANSVHPGAIAT 206
            +  N LA  L   G+ +  N+V PGA+ T
Sbjct: 158 HMTRN-LAFDLGPKGIRV--NAVAPGAVKT 184

This bacterial subgroup contains 7 alpha-HSDHs, including Escherichia coli 7 alpha-HSDH. 7 alpha-HSDH, a member of the SDR family, catalyzes the NAD+ -dependent dehydrogenation of a hydroxyl group at position 7 of the steroid skeleton of bile acids. In humans the two primary bile acids are cholic and chenodeoxycholic acids, these are formed from cholesterol in the liver. Escherichia coli 7 alpha-HSDH dehydroxylates these bile acids in the human intestine. Mammalian 7 alpha-HSDH activity has been found in livers. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 242

>gnl|CDD|181131 PRK07814, PRK07814, short chain dehydrogenase; Provisional

 Score = 54.0 bits (130), Expect = 1e-08
 Identities = 58/209 (27%), Positives = 84/209 (40%), Gaps = 34/209 (16%)

Query: 4   VITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSL 63
           V+TGA  G+G   A   A  G  V++  R  +   +V E I      A V A   DL+  
Sbjct: 14  VVTGAGRGLGAAIALAFAEAGADVLIAARTESQLDEVAEQIRAAGRRAHVVAA--DLAHP 71

Query: 64  ASVRNFASEYNIQHHQLNILINN-AGIMGTPFM-LSKDNIELQFATNHLGHFLLTNLLLD 121
            +    A +      +L+I++NN  G M  P +  S  ++   F  N      LT   + 
Sbjct: 72  EATAGLAGQAVEAFGRLDIVVNNVGGTMPNPLLSTSTKDLADAFTFNVATAHALTVAAVP 131

Query: 122 TMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLA----NI 177
            M + +    G G +IN+SS   RLA                 GF AY  +K A      
Sbjct: 132 LMLEHS----GGGSVINISSTMGRLAGR---------------GFAAYGTAKAALAHYTR 172

Query: 178 LHANELARRLKEDGVDITANSVHPGAIAT 206
           L A +L  R       I  N++ PG+I T
Sbjct: 173 LAALDLCPR-------IRVNAIAPGSILT 194

Length = 263

>gnl|CDD|236216 PRK08277, PRK08277, D-mannonate oxidoreductase; Provisional

 Score = 54.1 bits (131), Expect = 1e-08
 Identities = 40/156 (25%), Positives = 55/156 (35%), Gaps = 24/156 (15%)

Query: 3   IVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSS 62
            VITG    +G   A+ LA  G  V +  R+    + V   I      A   A++ D+  
Sbjct: 13  AVITGGGGVLGGAMAKELARAGAKVAILDRNQEKAEAVVAEIKAAGGEAL--AVKADVLD 70

Query: 63  LASVRNFASEYNIQHHQLNILINNAG-----------------IMGTPFMLSKDNIELQF 105
             S+     +        +ILIN AG                    T F L ++  E  F
Sbjct: 71  KESLEQARQQILEDFGPCDILINGAGGNHPKATTDNEFHELIEPTKTFFDLDEEGFEFVF 130

Query: 106 ATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSS 141
             N LG  L T +    M          G IIN+SS
Sbjct: 131 DLNLLGTLLPTQVFAKDMVG-----RKGGNIINISS 161

Length = 278

>gnl|CDD|180446 PRK06180, PRK06180, short chain dehydrogenase; Provisional

 Score = 53.8 bits (130), Expect = 1e-08
 Identities = 54/207 (26%), Positives = 84/207 (40%), Gaps = 33/207 (15%)

Query: 5   ITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLA 64
           ITG +SG G   A+     G  VV  VR  AA  D +          +  A  LD++   
Sbjct: 9   ITGVSSGFGRALAQAALAAGHRVVGTVRSEAARADFEALH-----PDRALARLLDVTDFD 63

Query: 65  SVRNFASEYNIQHHQLNILINNAGI--MGTPFMLSKDNIELQFATNHLGHFLLTNLLLDT 122
           ++    ++       +++L+NNAG    G         +  QF  N  G   +T  +L  
Sbjct: 64  AIDAVVADAEATFGPIDVLVNNAGYGHEGAIEESPLAEMRRQFEVNVFGAVAMTKAVLPG 123

Query: 123 MKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLA--NILHA 180
           M+  AR+    G I+N++S G  +               GY     Y  SK A   I  +
Sbjct: 124 MR--ARRR---GHIVNITSMGGLIT----------MPGIGY-----YCGSKFALEGISES 163

Query: 181 NELARRLKEDGVDITANSVHPGAIATN 207
             LA+ +   G+ +TA  V PG+  T+
Sbjct: 164 --LAKEVAPFGIHVTA--VEPGSFRTD 186

Length = 277

>gnl|CDD|233441 TIGR01500, sepiapter_red, sepiapterin reductase

 Score = 53.8 bits (129), Expect = 1e-08
 Identities = 40/154 (25%), Positives = 66/154 (42%), Gaps = 22/154 (14%)

Query: 4   VITGATSGIGTETARVLALR----GVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELD 59
           ++TGA+ G G   A+ LA      G  +V+  R+  A + +K  I  E    +V  + LD
Sbjct: 4   LVTGASRGFGRTIAQELAKCLKSPGSVLVLSARNDEALRQLKAEIGAERSGLRVVRVSLD 63

Query: 60  LSSLASVRNF--ASEYNIQHHQLN--ILINNAGIMGTPFMLSK--------DNIELQFAT 107
           L + A +     A     +   L   +LINNAG +G    +SK          ++  +A 
Sbjct: 64  LGAEAGLEQLLKALRELPRPKGLQRLLLINNAGTLGD---VSKGFVDLSDSTQVQNYWAL 120

Query: 108 NHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSS 141
           N      LT+ +   +K      G    ++N+SS
Sbjct: 121 NLTSMLCLTSSV---LKAFKDSPGLNRTVVNISS 151

This model describes sepiapterin reductase, a member of the short chain dehydrogenase/reductase family. The enzyme catalyzes the last step in the biosynthesis of tetrahydrobiopterin. A similar enzyme in Bacillus cereus was isolated for its ability to convert benzil to (S)-benzoin, a property sepiapterin reductase also shares. Cutoff scores for this model are set such that benzil reductase scores between trusted and noise cutoffs. Length = 256

>gnl|CDD|235910 PRK07024, PRK07024, short chain dehydrogenase; Provisional

 Score = 53.4 bits (129), Expect = 2e-08
 Identities = 56/215 (26%), Positives = 90/215 (41%), Gaps = 32/215 (14%)

Query: 3   IVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIP-SAKVDAMELDLS 61
           + ITGA+SGIG   AR  A +G    +G+  +A   D  +     +P +A+V     D+ 
Sbjct: 5   VFITGASSGIGQALAREYARQG--ATLGL--VARRTDALQAFAARLPKAARVSVYAADVR 60

Query: 62  SLASVRNFASEYNIQHHQL-NILINNAGI---MGTPFMLSKDNIELQFATNHLGHFLLTN 117
              ++   A+++ I  H L +++I NAGI     T              TN+ G      
Sbjct: 61  DADALAAAAADF-IAAHGLPDVVIANAGISVGTLTEEREDLAVFREVMDTNYFGMVATFQ 119

Query: 118 LLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANI 177
             +  M     ++   G ++ ++S         G+R        G  G  AYS SK A I
Sbjct: 120 PFIAPM-----RAARRGTLVGIASVA-------GVR--------GLPGAGAYSASKAAAI 159

Query: 178 LHANELARRLKEDGVDITANSVHPGAIATNIIRHN 212
            +   L   L+  GV +   ++ PG I T +  HN
Sbjct: 160 KYLESLRVELRPAGVRVV--TIAPGYIRTPMTAHN 192

Length = 257

>gnl|CDD|236210 PRK08267, PRK08267, short chain dehydrogenase; Provisional

 Score = 53.4 bits (129), Expect = 2e-08
 Identities = 43/145 (29%), Positives = 60/145 (41%), Gaps = 18/145 (12%)

Query: 3   IVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSS 62
           I ITGA SGIG  TA + A  G  V  G  DI         +  E+ +       LD++ 
Sbjct: 4   IFITGAASGIGRATALLFAAEGWRV--GAYDINE--AGLAALAAELGAGNAWTGALDVTD 59

Query: 63  LASVRN----FASEYNIQHHQLNILINNAGI-MGTPFM-LSKDNIELQFATNHLGHFLLT 116
            A+       FA+       +L++L NNAGI  G PF  +  +  +     N  G     
Sbjct: 60  RAAWDAALADFAAA---TGGRLDVLFNNAGILRGGPFEDIPLEAHDRVIDINVKGVLNGA 116

Query: 117 NLLLDTMKKTARKSGGEGRIINVSS 141
           +  L  +K T        R+IN SS
Sbjct: 117 HAALPYLKATP-----GARVINTSS 136

Length = 260

>gnl|CDD|180371 PRK06057, PRK06057, short chain dehydrogenase; Provisional

 Score = 53.2 bits (128), Expect = 2e-08
 Identities = 32/87 (36%), Positives = 42/87 (48%), Gaps = 9/87 (10%)

Query: 4  VITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSL 63
          VITG  SGIG  TAR LA  G  VV+G  D  AGK   +    E+    V     D++  
Sbjct: 11 VITGGGSGIGLATARRLAAEGATVVVGDIDPEAGKAAAD----EVGGLFVPT---DVTDE 63

Query: 64 ASVRN-FASEYNIQHHQLNILINNAGI 89
           +V   F +     +  ++I  NNAGI
Sbjct: 64 DAVNALFDTAAE-TYGSVDIAFNNAGI 89

Length = 255

>gnl|CDD|180440 PRK06172, PRK06172, short chain dehydrogenase; Provisional

 Score = 53.2 bits (128), Expect = 2e-08
 Identities = 53/212 (25%), Positives = 80/212 (37%), Gaps = 31/212 (14%)

Query: 4   VITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDA--MELDLS 61
           ++TG  +GIG  TA   A  G  VV+  RD A G    E  V  I  A  +A  +  D++
Sbjct: 11  LVTGGAAGIGRATALAFAREGAKVVVADRDAAGG----EETVALIREAGGEALFVACDVT 66

Query: 62  SLASVRNFASEYNIQHHQLNILINNAGIMGTPFML---SKDNIELQFATNHLGHFLLTNL 118
             A V+    +    + +L+   NNAGI      L   S+   +     N  G +L    
Sbjct: 67  RDAEVKALVEQTIAAYGRLDYAFNNAGIEIEQGRLAEGSEAEFDAIMGVNVKGVWLCMKY 126

Query: 119 LLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANIL 178
            +  M        G G I+N +S               +           Y+ SK A I 
Sbjct: 127 QIPLMLAQ-----GGGAIVNTAS---------------VAGLGAAPKMSIYAASKHAVIG 166

Query: 179 HANELARRLKEDGVDITANSVHPGAIATNIIR 210
                A    + G+ +  N+V P  I T++ R
Sbjct: 167 LTKSAAIEYAKKGIRV--NAVCPAVIDTDMFR 196

Length = 253

>gnl|CDD|180462 PRK06198, PRK06198, short chain dehydrogenase; Provisional

 Score = 52.7 bits (127), Expect = 3e-08
 Identities = 39/142 (27%), Positives = 62/142 (43%), Gaps = 9/142 (6%)

Query: 3   IVITGATSGIGTETARVLALRGVHVVMGV-RDIAAGKDVKETIVKEIPSAKVDAMELDLS 61
            ++TG T G+G   AR  A RG   ++   R+   G+     +  E   AK   ++ DLS
Sbjct: 9   ALVTGGTQGLGAAIARAFAERGAAGLVICGRNAEKGEAQAAEL--EALGAKAVFVQADLS 66

Query: 62  SLASVRNFASEYNIQHHQLNILINNAGIM--GTPFMLSKDNIELQFATNHLGHFLLTNLL 119
            +   R   +  +    +L+ L+N AG+   GT    S +  +  FA N    F L    
Sbjct: 67  DVEDCRRVVAAADEAFGRLDALVNAAGLTDRGTILDTSPELFDRHFAVNVRAPFFLMQEA 126

Query: 120 LDTMKKTARKSGGEGRIINVSS 141
           +  M    R+   EG I+N+ S
Sbjct: 127 IKLM----RRRKAEGTIVNIGS 144

Length = 260

>gnl|CDD|187626 cd05368, DHRS6_like_SDR_c, human DHRS6-like, classical (c) SDRs

 Score = 52.5 bits (126), Expect = 3e-08
 Identities = 51/207 (24%), Positives = 79/207 (38%), Gaps = 36/207 (17%)

Query: 3   IVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAK-VDAMELDLS 61
            +IT A  GIG   A   A  G +V+          D+ E  +KE+     +    LD++
Sbjct: 5   ALITAAAQGIGRAIALAFAREGANVI--------ATDINEEKLKELERGPGITTRVLDVT 56

Query: 62  SLASVRNFASEYNIQHHQLNILINNAGIM--GTPFMLSKDNIELQFATNHLGHFLLTNLL 119
               V   A E      ++++L N AG +  G+      D+ +     N    +L+   +
Sbjct: 57  DKEQVAALAKEEG----RIDVLFNCAGFVHHGSILDCEDDDWDFAMNLNVRSMYLMIKAV 112

Query: 120 LDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANILH 179
           L  M   ARK    G IIN+SS                +   G      YS +K A I  
Sbjct: 113 LPKM--LARKD---GSIINMSSVA--------------SSIKGVPNRFVYSTTKAAVIGL 153

Query: 180 ANELARRLKEDGVDITANSVHPGAIAT 206
              +A    + G  I  N++ PG + T
Sbjct: 154 TKSVAADFAQQG--IRCNAICPGTVDT 178

Human DHRS6, and similar proteins. These proteins are classical SDRs, with a canonical active site tetrad and a close match to the typical Gly-rich NAD-binding motif. Human DHRS6 is a cytosolic type 2 (R)-hydroxybutyrate dehydrogenase, which catalyses the conversion of (R)-hydroxybutyrate to acetoacetate. Also included in this subgroup is Escherichia coli UcpA (upstream cys P). Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Note: removed : needed to make this chiodl smaller when drew final trees: rmeoved text form description: Other proteins in this subgroup include Thermoplasma acidophilum aldohexose dehydrogenase, which has high dehydrogenase activity against D-mannose, Bacillus subtilis BacC involved in the biosynthesis of the dipeptide bacilysin and its antibiotic moiety anticapsin, Sphingomonas paucimobilis strain B90 LinC, involved in the degradation of hexachlorocyclohexane isomers...... P). Length = 241

>gnl|CDD|131468 TIGR02415, 23BDH, acetoin reductases

 Score = 52.5 bits (126), Expect = 4e-08
 Identities = 60/210 (28%), Positives = 91/210 (43%), Gaps = 35/210 (16%)

Query: 4   VITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSA--KVDAMELDLS 61
           ++TG   GIG   A  LA  G  V   V D+   +  KET  KEI  A  K  A +LD+S
Sbjct: 4   LVTGGAQGIGKGIAERLAKDGFAVA--VADLNE-ETAKETA-KEINQAGGKAVAYKLDVS 59

Query: 62  SLASVRNFASEYNIQHHQLNILINNAGI-MGTPFM-LSKDNIELQFATNHLGHFLLTNLL 119
               V +   +   +    ++++NNAG+   TP + ++++ ++  +  N  G        
Sbjct: 60  DKDQVFSAIDQAAEKFGGFDVMVNNAGVAPITPILEITEEELKKVYNVNVKGVLF----- 114

Query: 120 LDTMKKTAR---KSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLAN 176
              ++  AR   K G  G+IIN +S    +A HE           G     AYS +K A 
Sbjct: 115 --GIQAAARQFKKQGHGGKIINAAS----IAGHE-----------GNPILSAYSSTKFAV 157

Query: 177 ILHANELARRLKEDGVDITANSVHPGAIAT 206
                  A+ L   G  IT N+  PG + T
Sbjct: 158 RGLTQTAAQELAPKG--ITVNAYCPGIVKT 185

One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PMID:11577733) [Energy metabolism, Fermentation]. Length = 254

>gnl|CDD|187662 cd09761, A3DFK9-like_SDR_c, Clostridium thermocellum A3DFK9-like, a putative carbohydrate or polyalcohol metabolizing SDR, classical (c) SDRs

 Score = 52.2 bits (125), Expect = 4e-08
 Identities = 52/209 (24%), Positives = 80/209 (38%), Gaps = 37/209 (17%)

Query: 3   IVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSS 62
            ++TG   GIG +        G  VV    D   G D  E    E P+        D++ 
Sbjct: 4   AIVTGGGHGIGKQICLDFLEAGDKVVFADIDEERGADFAEA---EGPNLFFVHG--DVAD 58

Query: 63  LASVRNFASEYNIQHHQLNILINNAGIM--GTPFMLSKDNIELQFATNHLGHFLLTNLLL 120
              V+        +  ++++L+NNA     G    L  +  +   + N  G + L+    
Sbjct: 59  ETLVKFVVYAMLEKLGRIDVLVNNAARGSKGILSSLLLEEWDRILSVNLTGPYELSRYCR 118

Query: 121 DTMKKTARKSGGEGRIINV-SSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSK--LANI 177
           D + K       +GRIIN+ S+   +            ++P       AY+ SK  L  +
Sbjct: 119 DELIK------NKGRIINIASTRAFQ------------SEPDS----EAYAASKGGLVAL 156

Query: 178 LHANELARRLKEDGVDITANSVHPGAIAT 206
            HA  LA  L   G DI  N + PG I T
Sbjct: 157 THA--LAMSL---GPDIRVNCISPGWINT 180

This subgroup includes a putative carbohydrate or polyalcohol metabolizing SDR (A3DFK9) from Clostridium thermocellum. Its members have a TGXXXGXG classical-SDR glycine-rich NAD-binding motif, and some have a canonical SDR active site tetrad (A3DFK9 lacks the upstream Asn). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 242

>gnl|CDD|181585 PRK08936, PRK08936, glucose-1-dehydrogenase; Provisional

 Score = 52.4 bits (126), Expect = 4e-08
 Identities = 61/209 (29%), Positives = 87/209 (41%), Gaps = 26/209 (12%)

Query: 3   IVITGATSGIGTETARVLALRGVHVVMGVR-DIAAGKDVKETIVKEIPSAKVDAMELDLS 61
           +VITG ++G+G   A         VV+  R D     DV E I K     +  A++ D++
Sbjct: 10  VVITGGSTGLGRAMAVRFGKEKAKVVINYRSDEEEANDVAEEIKKA--GGEAIAVKGDVT 67

Query: 62  SLASVRNFASEYNIQHHQLNILINNAGI-MGTP-FMLSKDNIELQFATNHLGHFLLTNLL 119
             + V N       +   L+++INNAGI    P   +S ++      TN  G FL +   
Sbjct: 68  VESDVVNLIQTAVKEFGTLDVMINNAGIENAVPSHEMSLEDWNKVINTNLTGAFLGSREA 127

Query: 120 LDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANILH 179
           +    +   K    G IIN+SS       HE I +     P     F  Y+ SK    L 
Sbjct: 128 IKYFVEHDIK----GNIINMSS------VHEQIPW-----PL----FVHYAASKGGVKLM 168

Query: 180 ANELARRLKEDGVDITANSVHPGAIATNI 208
              LA      G  I  N++ PGAI T I
Sbjct: 169 TETLAMEYAPKG--IRVNNIGPGAINTPI 195

Length = 261

>gnl|CDD|181113 PRK07775, PRK07775, short chain dehydrogenase; Provisional

 Score = 52.4 bits (126), Expect = 4e-08
 Identities = 52/206 (25%), Positives = 88/206 (42%), Gaps = 28/206 (13%)

Query: 4   VITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSL 63
           ++ GA+SGIG  TA  LA  G  V +G R +   +++ + I  +   A   A  LD++  
Sbjct: 14  LVAGASSGIGAATAIELAAAGFPVALGARRVEKCEELVDKIRADGGEAV--AFPLDVTDP 71

Query: 64  ASVRNFASEYNIQHHQLNILINNAGIM--GTPFMLSKDNIELQFATNHLGHFLLTNLLLD 121
            SV++F ++      ++ +L++ AG    G    +S +  E Q   + +G   L   +L 
Sbjct: 72  DSVKSFVAQAEEALGEIEVLVSGAGDTYFGKLHEISTEQFESQVQIHLVGANRLATAVLP 131

Query: 122 TMKKTARKSGGEGRIINVSSE-GHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANILHA 180
            M +  R     G +I V S+   R   H G                AY  +K       
Sbjct: 132 GMIERRR-----GDLIFVGSDVALRQRPHMG----------------AYGAAKAGLEAMV 170

Query: 181 NELARRLKEDGVDITANSVHPGAIAT 206
             L  +++ +G  + A+ VHPG   T
Sbjct: 171 TNL--QMELEGTGVRASIVHPGPTLT 194

Length = 274

>gnl|CDD|235545 PRK05650, PRK05650, short chain dehydrogenase; Provisional

 Score = 52.4 bits (126), Expect = 5e-08
 Identities = 35/145 (24%), Positives = 61/145 (42%), Gaps = 13/145 (8%)

Query: 1   MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDA--MEL 58
             ++ITGA SG+G   A   A  G  + +   +   G    E  +K +  A  D      
Sbjct: 1   NRVMITGAASGLGRAIALRWAREGWRLALADVNEEGG----EETLKLLREAGGDGFYQRC 56

Query: 59  DLSSLASVRNFASEYNIQHHQLNILINNAGIMGTPFM--LSKDNIELQFATNHLGHFLLT 116
           D+   + +   A     +   +++++NNAG+    F   LS ++ + Q A N +G     
Sbjct: 57  DVRDYSQLTALAQACEEKWGGIDVIVNNAGVASGGFFEELSLEDWDWQIAINLMGVVKGC 116

Query: 117 NLLLDTMKKTARKSGGEGRIINVSS 141
              L   K+        GRI+N++S
Sbjct: 117 KAFLPLFKRQ-----KSGRIVNIAS 136

Length = 270

>gnl|CDD|187599 cd05340, Ycik_SDR_c, Escherichia coli K-12 YCIK-like, classical (c) SDRs

 Score = 51.8 bits (124), Expect = 5e-08
 Identities = 49/208 (23%), Positives = 87/208 (41%), Gaps = 26/208 (12%)

Query: 3   IVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEI-PSAKVDAMELDLS 61
           I++TGA+ GIG E A   A  G  V++  R+    + V + I +E     +   ++L   
Sbjct: 7   ILVTGASDGIGREAALTYARYGATVILLGRNEEKLRQVADHINEEGGRQPQWFILDLLTC 66

Query: 62  SLASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQ---FATNHLGHFLLTNL 118
           +  + +  A    + + +L+ +++NAG++G    LS+ N ++       N    F+LT  
Sbjct: 67  TSENCQQLAQRIAVNYPRLDGVLHNAGLLGDVCPLSEQNPQVWQDVXQVNVNATFMLTQA 126

Query: 119 LLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANIL 178
           LL  + K+       G ++  SS   R                   G  AY+ SK A   
Sbjct: 127 LLPLLLKSD-----AGSLVFTSSSVGR-------------QGRANWG--AYAVSKFATEG 166

Query: 179 HANELARRLKEDGVDITANSVHPGAIAT 206
               LA   +    ++  N ++PG   T
Sbjct: 167 LXQVLADEYQ--QRNLRVNCINPGGTRT 192

Escherichia coli K-12 YCIK and related proteins have a canonical classical SDR nucleotide-binding motif and active site tetrad. They are predicted oxoacyl-(acyl carrier protein/ACP) reductases. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 236

>gnl|CDD|236357 PRK08945, PRK08945, putative oxoacyl-(acyl carrier protein) reductase; Provisional

 Score = 51.8 bits (125), Expect = 6e-08
 Identities = 54/222 (24%), Positives = 90/222 (40%), Gaps = 52/222 (23%)

Query: 3   IVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVK--ETIVKEIPSA---KVDAME 57
           I++TGA  GIG E A   A  G  V++       G+  +  E +  EI +A   +   + 
Sbjct: 15  ILVTGAGDGIGREAALTYARHGATVIL------LGRTEEKLEAVYDEIEAAGGPQPAIIP 68

Query: 58  LDLSSLASVRNF---ASEYNIQHHQLNILINNAGIMG--TPF-MLSKDNIELQFATNHLG 111
           LDL + A+ +N+   A     Q  +L+ +++NAG++G   P      +  +     N   
Sbjct: 69  LDLLT-ATPQNYQQLADTIEEQFGRLDGVLHNAGLLGELGPMEQQDPEVWQDVMQVNVNA 127

Query: 112 HFLLTNLLLDTMKKTARKSGGEGRIINVSSE-GHRLAYHEGIRFDKINDPSGYNGFRAYS 170
            F+LT  LL  + K+         ++  SS  G                  G   + AY+
Sbjct: 128 TFMLTQALLPLLLKSP-----AASLVFTSSSVGR----------------QGRANWGAYA 166

Query: 171 QSKLA-----NILHANELARRLKEDGVDITANSVHPGAIATN 207
            SK A      +L A+E        G ++  N ++PG   T 
Sbjct: 167 VSKFATEGMMQVL-ADEY------QGTNLRVNCINPGGTRTA 201

Length = 247

>gnl|CDD|168574 PRK06484, PRK06484, short chain dehydrogenase; Validated

 Score = 52.2 bits (125), Expect = 8e-08
 Identities = 51/208 (24%), Positives = 79/208 (37%), Gaps = 34/208 (16%)

Query: 3   IVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSS 62
           + ITG   GIG   A   A  G  +++  RD    K + E +  E  S +      D++ 
Sbjct: 272 VAITGGARGIGRAVADRFAAAGDRLLIIDRDAEGAKKLAEALGDEHLSVQA-----DITD 326

Query: 63  LASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKD----NIELQFATNHLGHFLLTNL 118
            A+V +  ++   +  +L++L+NNAG +   F  S +    +    +  N  G F     
Sbjct: 327 EAAVESAFAQIQARWGRLDVLVNNAG-IAEVFKPSLEQSAEDFTRVYDVNLSGAFA---- 381

Query: 119 LLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANIL 178
                +  AR     G I+N+ S               I          AY  SK A  +
Sbjct: 382 ---CARAAARLMSQGGVIVNLGS---------------IASLLALPPRNAYCASKAAVTM 423

Query: 179 HANELARRLKEDGVDITANSVHPGAIAT 206
            +  LA      G  I  N+V PG I T
Sbjct: 424 LSRSLACEWAPAG--IRVNTVAPGYIET 449

Length = 520

>gnl|CDD|180458 PRK06194, PRK06194, hypothetical protein; Provisional

 Score = 51.6 bits (124), Expect = 8e-08
 Identities = 40/146 (27%), Positives = 63/146 (43%), Gaps = 15/146 (10%)

Query: 4   VITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPS--AKVDAMELDLS 61
           VITGA SG G   AR+ A  G+ +V+   D+    D  +  V E+ +  A+V  +  D+S
Sbjct: 10  VITGAASGFGLAFARIGAALGMKLVLA--DVQQ--DALDRAVAELRAQGAEVLGVRTDVS 65

Query: 62  SLASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQ--FATNHLGHF----LL 115
             A V   A     +   +++L NNAG+     +      + +     N  G        
Sbjct: 66  DAAQVEALADAALERFGAVHLLFNNAGVGAGGLVWENSLADWEWVLGVNLWGVIHGVRAF 125

Query: 116 TNLLLDTMKKTARKSGGEGRIINVSS 141
           T L+L   +K       EG I+N +S
Sbjct: 126 TPLMLAAAEKDP---AYEGHIVNTAS 148

Length = 287

>gnl|CDD|187629 cd05371, HSD10-like_SDR_c, 17hydroxysteroid dehydrogenase type 10 (HSD10)-like, classical (c) SDRs

 Score = 50.8 bits (122), Expect = 1e-07
 Identities = 57/220 (25%), Positives = 85/220 (38%), Gaps = 32/220 (14%)

Query: 3   IVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSS 62
            V+TG  SG+G  T   L  +G  VV+     + G    ET+ K         + +D++S
Sbjct: 5   AVVTGGASGLGLATVERLLAQGAKVVILDLPNSPG----ETVAKLGD--NCRFVPVDVTS 58

Query: 63  LASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNI------ELQFA--TNHLGHFL 114
              V+   +    +  +L+I++N AGI       +K           Q     N +G F 
Sbjct: 59  EKDVKAALALAKAKFGRLDIVVNCAGIAVAAKTYNKKGQQPHSLELFQRVINVNLIGTFN 118

Query: 115 LTNLLLDTMKKTARKSGGE-GRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSK 173
           +  L    M K     GGE G IIN +S    +A  EG             G  AYS SK
Sbjct: 119 VIRLAAGAMGKNEPDQGGERGVIINTAS----VAAFEGQI-----------GQAAYSASK 163

Query: 174 LANILHANELARRLKEDGVDITANSVHPGAIATNIIRHNS 213
              +     +AR L   G  I   ++ PG   T ++    
Sbjct: 164 GGIVGMTLPIARDLAPQG--IRVVTIAPGLFDTPLLAGLP 201

HSD10, also known as amyloid-peptide-binding alcohol dehydrogenase (ABAD), was previously identified as a L-3-hydroxyacyl-CoA dehydrogenase, HADH2. In fatty acid metabolism, HADH2 catalyzes the third step of beta-oxidation, the conversion of a hydroxyl to a keto group in the NAD-dependent oxidation of L-3-hydroxyacyl CoA. In addition to alcohol dehydrogenase and HADH2 activites, HSD10 has steroid dehydrogenase activity. Although the mechanism is unclear, HSD10 is implicated in the formation of amyloid beta-petide in the brain (which is linked to the development of Alzheimer's disease). Although HSD10 is normally concentrated in the mitochondria, in the presence of amyloid beta-peptide it translocates into the plasma membrane, where it's action may generate cytotoxic aldehydes and may lower estrogen levels through its use of 17-beta-estradiol as a substrate. HSD10 is a member of the SRD family, but differs from other SDRs by the presence of two insertions of unknown function. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 252

>gnl|CDD|183719 PRK12747, PRK12747, short chain dehydrogenase; Provisional

 Score = 50.8 bits (121), Expect = 1e-07
 Identities = 59/215 (27%), Positives = 91/215 (42%), Gaps = 37/215 (17%)

Query: 4   VITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMEL--DLS 61
           ++TGA+ GIG   A+ LA  G  V +        K+  E  V EI S    A  +  +L 
Sbjct: 8   LVTGASRGIGRAIAKRLANDGALVAI---HYGNRKEEAEETVYEIQSNGGSAFSIGANLE 64

Query: 62  SLASVRNFASEYNIQ------HHQLNILINNAGIMGTPFM--LSKDNIELQFATNHLGHF 113
           SL  V    S  + +        + +ILINNAGI    F+   ++   +   + N    F
Sbjct: 65  SLHGVEALYSSLDNELQNRTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPF 124

Query: 114 LLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSK 173
            +    L  ++  +       RIIN+SS   R++  +               F AYS +K
Sbjct: 125 FIIQQALSRLRDNS-------RIINISSAATRISLPD---------------FIAYSMTK 162

Query: 174 LANILHANELARRLKEDGVDITANSVHPGAIATNI 208
            A       LA++L   G  IT N++ PG I T++
Sbjct: 163 GAINTMTFTLAKQLGARG--ITVNAILPGFIKTDM 195

Length = 252

>gnl|CDD|237189 PRK12748, PRK12748, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 50.1 bits (120), Expect = 3e-07
 Identities = 61/218 (27%), Positives = 98/218 (44%), Gaps = 39/218 (17%)

Query: 4   VITGAT--SGIGTETARVLALRGVHVVM-----GVRDIAAGKDVKETIV--KEI--PSAK 52
           ++TGA+  +GIG    R LA +G+ +         + +  G   KE ++  +EI     +
Sbjct: 9   LVTGASRLNGIGAAVCRRLAAKGIDIFFTYWSPYDKTMPWGMHDKEPVLLKEEIESYGVR 68

Query: 53  VDAMELDLSSLASVRNFASEYNIQHHQLNILINNA--GIMGTPFMLSKDNIELQFATNHL 110
            + ME+DLS   +        + +    +ILINNA          L+ + ++  +A N  
Sbjct: 69  CEHMEIDLSQPYAPNRVFYAVSERLGDPSILINNAAYSTHTRLEELTAEQLDKHYAVNVR 128

Query: 111 GHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYS 170
              LL++      K+   K+G  GRIIN++S G  L    G   D++          AY+
Sbjct: 129 ATMLLSSAF---AKQYDGKAG--GRIINLTS-GQSL----GPMPDEL----------AYA 168

Query: 171 QSKLANILHA--NELARRLKEDGVDITANSVHPGAIAT 206
            +K A  + A    LA  L E G  IT N+V+PG   T
Sbjct: 169 ATKGA--IEAFTKSLAPELAEKG--ITVNAVNPGPTDT 202

Length = 256

>gnl|CDD|180823 PRK07074, PRK07074, short chain dehydrogenase; Provisional

 Score = 49.4 bits (118), Expect = 4e-07
 Identities = 53/210 (25%), Positives = 80/210 (38%), Gaps = 39/210 (18%)

Query: 4   VITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSL 63
           ++TGA  GIG   AR     G  V+    D AA           +  A+   +  DL+  
Sbjct: 6   LVTGAAGGIGQALARRFLAAGDRVLALDIDAAALAAF----ADALGDARFVPVACDLTDA 61

Query: 64  ASVRNFASEYNIQHHQLNILINNAGIMG-------TPFMLSKDNIELQFATNHLGHFLLT 116
           AS+    +    +   +++L+ NAG          TP     DN     A N    +L  
Sbjct: 62  ASLAAALANAAAERGPVDVLVANAGAARAASLHDTTPASWRADN-----ALNLEAAYLCV 116

Query: 117 NLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLAN 176
             +L+ M K +R     G ++N+ S               +N  +   G  AYS +K   
Sbjct: 117 EAVLEGMLKRSR-----GAVVNIGS---------------VNGMAAL-GHPAYSAAKAGL 155

Query: 177 ILHANELARRLKEDGVDITANSVHPGAIAT 206
           I +   LA      G  I AN+V PG + T
Sbjct: 156 IHYTKLLAVEYGRFG--IRANAVAPGTVKT 183

Length = 257

>gnl|CDD|180818 PRK07062, PRK07062, short chain dehydrogenase; Provisional

 Score = 49.3 bits (118), Expect = 4e-07
 Identities = 26/85 (30%), Positives = 43/85 (50%)

Query: 4  VITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSL 63
          V+TG +SGIG  T  +L   G  V +  RD       +  + ++ P A++ A   D+   
Sbjct: 12 VVTGGSSGIGLATVELLLEAGASVAICGRDEERLASAEARLREKFPGARLLAARCDVLDE 71

Query: 64 ASVRNFASEYNIQHHQLNILINNAG 88
          A V  FA+    +   +++L+NNAG
Sbjct: 72 ADVAAFAAAVEARFGGVDMLVNNAG 96

Length = 265

>gnl|CDD|180761 PRK06935, PRK06935, 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

 Score = 49.3 bits (118), Expect = 4e-07
 Identities = 55/210 (26%), Positives = 89/210 (42%), Gaps = 35/210 (16%)

Query: 4   VITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSL 63
           ++TG  +G+G   A  LA  G  +++         + +  I KE    KV  +++DL+  
Sbjct: 19  IVTGGNTGLGQGYAVALAKAGADIIITTHG-TNWDETRRLIEKE--GRKVTFVQVDLTKP 75

Query: 64  ASVRNFASEYNIQHHQLNILINNAG-IMGTPFMLSKD-NIELQFATNHLGHFLLTNLLLD 121
            S      E   +  +++IL+NNAG I   P +  KD +       N    + L+  +  
Sbjct: 76  ESAEKVVKEALEEFGKIDILVNNAGTIRRAPLLEYKDEDWNAVMDINLNSVYHLSQAVAK 135

Query: 122 TMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSK--LANILH 179
            M K      G G+IIN++S    L++  G                AY+ SK  +A +  
Sbjct: 136 VMAKQ-----GSGKIINIAS---MLSFQGGKFVP------------AYTASKHGVAGLTK 175

Query: 180 --ANELARRLKEDGVDITANSVHPGAIATN 207
             ANELA        +I  N++ PG I T 
Sbjct: 176 AFANELAAY------NIQVNAIAPGYIKTA 199

Length = 258

>gnl|CDD|180576 PRK06463, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 49.0 bits (117), Expect = 5e-07
 Identities = 50/211 (23%), Positives = 81/211 (38%), Gaps = 32/211 (15%)

Query: 1   MDIVITGATSGIGTETARVLALRGVHV-VMGVRDIAAGKDVKETIVKEIPSAKVDAMELD 59
              +ITG T GIG   A      G  V V+        K+++E          V  ++ D
Sbjct: 8   KVALITGGTRGIGRAIAEAFLREGAKVAVLYNSAENEAKELREK--------GVFTIKCD 59

Query: 60  LSSLASVRNFASEYNIQHHQLNILINNAGIMGT-PF-MLSKDNIELQFATNHLGHFLLTN 117
           + +   V+        +  ++++L+NNAGIM   PF    ++        N  G    T 
Sbjct: 60  VGNRDQVKKSKEVVEKEFGRVDVLVNNAGIMYLMPFEEFDEEKYNKMIKINLNGAIYTTY 119

Query: 118 LLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANI 177
             L  +K +       G I+N++S        EG  F              Y+ +K   I
Sbjct: 120 EFLPLLKLSKN-----GAIVNIASNAGIGTAAEGTTF--------------YAITKAGII 160

Query: 178 LHANELARRLKEDGVDITANSVHPGAIATNI 208
           +    LA  L + G  I  N+V PG + T++
Sbjct: 161 ILTRRLAFELGKYG--IRVNAVAPGWVETDM 189

Length = 255

>gnl|CDD|181295 PRK08213, PRK08213, gluconate 5-dehydrogenase; Provisional

 Score = 48.8 bits (117), Expect = 6e-07
 Identities = 56/211 (26%), Positives = 88/211 (41%), Gaps = 41/211 (19%)

Query: 4   VITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMEL--DLS 61
           ++TG + G+G + A  L   G  VV+  R     ++        + +  +DA+ +  D++
Sbjct: 16  LVTGGSRGLGLQIAEALGEAGARVVLSARKAEELEEAAA----HLEALGIDALWIAADVA 71

Query: 62  SLASVRNFASEYNIQHHQLNILINNAGIM-GTPFMLSKDN--------IELQFATNHLGH 112
             A +   A E   +   ++IL+NNAG   G P   ++D+        + L    N  G 
Sbjct: 72  DEADIERLAEETLERFGHVDILVNNAGATWGAP---AEDHPVEAWDKVMNL----NVRGL 124

Query: 113 FLLTNLLLDTMKKTARKSGGEGRIINVSS-EGHRLAYHEGIRFDKINDPSGYNGFRAYSQ 171
           FLL+      + K +    G GRIINV+S  G  L  +          P       AY+ 
Sbjct: 125 FLLSQ----AVAKRSMIPRGYGRIINVASVAG--LGGN----------PPEVMDTIAYNT 168

Query: 172 SKLANILHANELARRLKEDGVDITANSVHPG 202
           SK A I     LA      G  I  N++ PG
Sbjct: 169 SKGAVINFTRALAAEWGPHG--IRVNAIAPG 197

Length = 259

>gnl|CDD|181126 PRK07806, PRK07806, short chain dehydrogenase; Provisional

 Score = 48.6 bits (116), Expect = 6e-07
 Identities = 43/158 (27%), Positives = 65/158 (41%), Gaps = 32/158 (20%)

Query: 3   IVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSA--KVDAMELDL 60
            ++TG++ GIG +TA++LA  G HVV+  R  A        +V EI +A  +  A+  DL
Sbjct: 9   ALVTGSSRGIGADTAKILAGAGAHVVVNYRQKAPR---ANKVVAEIEAAGGRASAVGADL 65

Query: 61  SSLASVRNFASEYNIQHHQLNILINNA-GIM-----------------------GTPFML 96
           +   SV         +   L+ L+ NA G M                         P M 
Sbjct: 66  TDEESVAALMDTAREEFGGLDALVLNASGGMESGMDEDYAMRLNRDAQRNLARAALPLMP 125

Query: 97  SKDNIELQFATNHLGHFLLTNLLLDTMKKTAR-KSGGE 133
           +   +   F T+H  HF+ T   +   +  AR K  GE
Sbjct: 126 AGSRV--VFVTSHQAHFIPTVKTMPEYEPVARSKRAGE 161

Length = 248

>gnl|CDD|181159 PRK07890, PRK07890, short chain dehydrogenase; Provisional

 Score = 48.8 bits (117), Expect = 7e-07
 Identities = 47/209 (22%), Positives = 77/209 (36%), Gaps = 36/209 (17%)

Query: 3   IVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMEL--DL 60
           +V++G   G+G   A   A  G  VV+  R      +V      EI      A+ +  D+
Sbjct: 8   VVVSGVGPGLGRTLAVRAARAGADVVLAARTAERLDEVA----AEIDDLGRRALAVPTDI 63

Query: 61  SSLASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQ-----FATNHLGHFLL 115
           +      N  +    +  +++ L+NNA  +  P M    + +          N LG   L
Sbjct: 64  TDEDQCANLVALALERFGRVDALVNNAFRV--PSMKPLADADFAHWRAVIELNVLGTLRL 121

Query: 116 TNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLA 175
           T      + ++       G I+ ++S   R   H   ++             AY  +K A
Sbjct: 122 TQAFTPALAES------GGSIVMINSMVLR---HSQPKYG------------AYKMAKGA 160

Query: 176 NILHANELARRLKEDGVDITANSVHPGAI 204
            +  +  LA  L   G  I  NSV PG I
Sbjct: 161 LLAASQSLATELGPQG--IRVNSVAPGYI 187

Length = 258

>gnl|CDD|181721 PRK09242, PRK09242, tropinone reductase; Provisional

 Score = 48.6 bits (116), Expect = 7e-07
 Identities = 54/204 (26%), Positives = 80/204 (39%), Gaps = 24/204 (11%)

Query: 5   ITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLA 64
           ITGA+ GIG   AR     G  V++  RD  A    ++ + +E P  +V  +  D+S   
Sbjct: 14  ITGASKGIGLAIAREFLGLGADVLIVARDADALAQARDELAEEFPEREVHGLAADVSDDE 73

Query: 65  SVRNFASEYNIQHHQLNILINNAGIMGTPFML--SKDNIELQFATNHLGHFLLTNLLLDT 122
             R            L+IL+NNAG       +  ++D     F TN    F L+      
Sbjct: 74  DRRAILDWVEDHWDGLHILVNNAGGNIRKAAIDYTEDEWRGIFETNLFSAFELSRYAHPL 133

Query: 123 MKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANILHANE 182
           +K+ A  +     I+N+ S         G+   +   P        Y  +K A +     
Sbjct: 134 LKQHASSA-----IVNIGSVS-------GLTHVRSGAP--------YGMTKAALLQMTRN 173

Query: 183 LARRLKEDGVDITANSVHPGAIAT 206
           LA    EDG  I  N+V P  I T
Sbjct: 174 LAVEWAEDG--IRVNAVAPWYIRT 195

Length = 257

>gnl|CDD|180993 PRK07478, PRK07478, short chain dehydrogenase; Provisional

 Score = 48.4 bits (116), Expect = 7e-07
 Identities = 67/245 (27%), Positives = 93/245 (37%), Gaps = 53/245 (21%)

Query: 3   IVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMEL---- 58
            +ITGA+SGIG   A++ A  G  VV+G R     +   + +V EI +   +A+ L    
Sbjct: 9   AIITGASSGIGRAAAKLFAREGAKVVVGAR----RQAELDQLVAEIRAEGGEAVALAGDV 64

Query: 59  -------DLSSLASVRNFASEYNIQHHQLNILINNAGIMGTP---FMLSKDNIELQFATN 108
                   L +LA V  F          L+I  NNAG +G       +S +      ATN
Sbjct: 65  RDEAYAKALVALA-VERFGG--------LDIAFNNAGTLGEMGPVAEMSLEGWRETLATN 115

Query: 109 HLGHFLLTNLLLDTMKKTARKSGGEGRIINVSS-EGHRLAYHEGIRFDKINDPSGYNGFR 167
               FL     +  M       GG G +I  S+  GH                 G+ G  
Sbjct: 116 LTSAFLGAKHQIPAM----LARGG-GSLIFTSTFVGHTA---------------GFPGMA 155

Query: 168 AYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH---NSLFRSMNTILHA 224
           AY+ SK   I     LA      G  I  N++ PG   T + R         +    LHA
Sbjct: 156 AYAASKAGLIGLTQVLAAEYGAQG--IRVNALLPGGTDTPMGRAMGDTPEALAFVAGLHA 213

Query: 225 LPGIA 229
           L  +A
Sbjct: 214 LKRMA 218

Length = 254

>gnl|CDD|235816 PRK06500, PRK06500, short chain dehydrogenase; Provisional

 Score = 48.4 bits (116), Expect = 7e-07
 Identities = 51/204 (25%), Positives = 78/204 (38%), Gaps = 31/204 (15%)

Query: 5   ITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLA 64
           ITG TSGIG ETAR     G  V +  RD A+ +  +  +           +  D   +A
Sbjct: 11  ITGGTSGIGLETARQFLAEGARVAITGRDPASLEAARAEL-----GESALVIRADAGDVA 65

Query: 65  SVRNFASEYNIQHHQLNILINNAGI-MGTPFML-SKDNIELQFATNHLGHFLLTNLLLDT 122
           + +  A        +L+ +  NAG+    P     +   +  F TN  G + L   LL  
Sbjct: 66  AQKALAQALAEAFGRLDAVFINAGVAKFAPLEDWDEAMFDRSFNTNVKGPYFLIQALLPL 125

Query: 123 MKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANILHANE 182
           +   A        ++N S   H            I  P+       Y+ SK A +  A  
Sbjct: 126 LANPA------SIVLNGSINAH------------IGMPNS----SVYAASKAALLSLAKT 163

Query: 183 LARRLKEDGVDITANSVHPGAIAT 206
           L+  L   G+ +  N+V PG + T
Sbjct: 164 LSGELLPRGIRV--NAVSPGPVQT 185

Length = 249

>gnl|CDD|187611 cd05353, hydroxyacyl-CoA-like_DH_SDR_c-like, (3R)-hydroxyacyl-CoA dehydrogenase-like, classical(c)-like SDRs

 Score = 48.5 bits (116), Expect = 9e-07
 Identities = 57/215 (26%), Positives = 91/215 (42%), Gaps = 44/215 (20%)

Query: 3   IVITGATSGIGTETARVLALRGVHVVMGVRDI-------AAGKDVKETIVKEIPSAKVDA 55
           +++TGA  G+G   A   A RG  VV  V D+              + +V EI +A   A
Sbjct: 8   VLVTGAGGGLGRAYALAFAERGAKVV--VNDLGGDRKGSGKSSSAADKVVDEIKAAGGKA 65

Query: 56  MELDLSSLASVRNFAS--EYNIQHHQ-LNILINNAGIM--GTPFMLSKDNIELQFATNHL 110
               +++  SV +     +  I     ++IL+NNAGI+   +   +S+++ +L    +  
Sbjct: 66  ----VANYDSVEDGEKIVKTAIDAFGRVDILVNNAGILRDRSFAKMSEEDWDLVMRVHLK 121

Query: 111 GHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGI--RFDKINDPSGYNGFRA 168
           G F +T      M+K        GRIIN SS         G+   F + N          
Sbjct: 122 GSFKVTRAAWPYMRKQ-----KFGRIINTSSAA-------GLYGNFGQAN---------- 159

Query: 169 YSQSKLANILHANELARRLKEDGVDITANSVHPGA 203
           YS +KL  +  +N LA    +    IT N++ P A
Sbjct: 160 YSAAKLGLLGLSNTLAIEGAKYN--ITCNTIAPAA 192

Beta oxidation of fatty acids in eukaryotes occurs by a four-reaction cycle, that may take place in mitochondria or in peroxisomes. (3R)-hydroxyacyl-CoA dehydrogenase is part of rat peroxisomal multifunctional MFE-2, it is a member of the NAD-dependent SDRs, but contains an additional small C-terminal domain that completes the active site pocket and participates in dimerization. The atypical, additional C-terminal extension allows for more extensive dimerization contact than other SDRs. MFE-2 catalyzes the second and third reactions of the peroxisomal beta oxidation cycle. Proteins in this subgroup have a typical catalytic triad, but have a His in place of the usual upstream Asn. This subgroup also contains members identified as 17-beta-hydroxysteroid dehydrogenases, including human peroxisomal 17-beta-hydroxysteroid dehydrogenase type 4 (17beta-HSD type 4, aka MFE-2, encoded by HSD17B4 gene) which is involved in fatty acid beta-oxidation and steroid metabolism. This subgroup also includes two SDR domains of the Neurospora crassa and Saccharomyces cerevisiae multifunctional beta-oxidation protein (MFP, aka Fox2). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 250

>gnl|CDD|171822 PRK12938, PRK12938, acetyacetyl-CoA reductase; Provisional

 Score = 48.5 bits (115), Expect = 9e-07
 Identities = 57/224 (25%), Positives = 94/224 (41%), Gaps = 32/224 (14%)

Query: 5   ITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVD--AMELDLSS 62
           +TG   GIGT   + L   G  VV G          +   +++  +   D  A E ++  
Sbjct: 8   VTGGMGGIGTSICQRLHKDGFKVVAGC---GPNSPRRVKWLEDQKALGFDFIASEGNVGD 64

Query: 63  LASVRNFASEYNIQHHQLNILINNAGIMGTPFM--LSKDNIELQFATNHLGHFLLTNLLL 120
             S +    +   +  ++++L+NNAGI        +++++      TN    F +T  ++
Sbjct: 65  WDSTKAAFDKVKAEVGEIDVLVNNAGITRDVVFRKMTREDWTAVIDTNLTSLFNVTKQVI 124

Query: 121 DTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANILHA 180
           D M +      G GRIIN+SS               +N   G  G   YS +K       
Sbjct: 125 DGMVER-----GWGRIINISS---------------VNGQKGQFGQTNYSTAKAGIHGFT 164

Query: 181 NELARRLKEDGVDITANSVHPGAIATNI---IRHNSLFRSMNTI 221
             LA+ +   GV  T N+V PG I T++   IR + L + + TI
Sbjct: 165 MSLAQEVATKGV--TVNTVSPGYIGTDMVKAIRPDVLEKIVATI 206

Length = 246

>gnl|CDD|183714 PRK12742, PRK12742, oxidoreductase; Provisional

 Score = 47.8 bits (114), Expect = 1e-06
 Identities = 62/231 (26%), Positives = 87/231 (37%), Gaps = 44/231 (19%)

Query: 3   IVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSS 62
           +++ G + GIG    R     G +V       A  KD  E + +E  +  V     D  +
Sbjct: 9   VLVLGGSRGIGAAIVRRFVTDGANVRF---TYAGSKDAAERLAQETGATAVQTDSADRDA 65

Query: 63  LAS-VRNFASEYNIQHHQLNILINNAGI--MGTPFMLSKDNIELQFATN-HLGHFLLTNL 118
           +   VR   +        L+IL+ NAGI   G    L  D+I+  F  N H  +      
Sbjct: 66  VIDVVRKSGA--------LDILVVNAGIAVFGDALELDADDIDRLFKINIHAPYHASV-- 115

Query: 119 LLDTMKKTARKSGGEGRIINVSS-EGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANI 177
                 + AR+    GRII + S  G R+                  G  AY+ SK A  
Sbjct: 116 ------EAARQMPEGGRIIIIGSVNGDRMPV---------------AGMAAYAASKSALQ 154

Query: 178 LHANELARRLKEDGVDITANSVHPGAIATNIIRHNSLFRSMNTILHALPGI 228
             A  LAR     G  IT N V PG I T+    N     M  ++H+   I
Sbjct: 155 GMARGLARDFGPRG--ITINVVQPGPIDTDA---NPANGPMKDMMHSFMAI 200

Length = 237

>gnl|CDD|180796 PRK07023, PRK07023, short chain dehydrogenase; Provisional

 Score = 47.7 bits (114), Expect = 1e-06
 Identities = 48/212 (22%), Positives = 77/212 (36%), Gaps = 39/212 (18%)

Query: 4   VITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSL 63
           ++TG + G+G   A  L   G+ V+     +A  +      +      ++  +ELDLS  
Sbjct: 5   IVTGHSRGLGAALAEQLLQPGIAVL----GVARSRH---PSLAAAAGERLAEVELDLSDA 57

Query: 64  ASVRNFASEYNIQH----HQLNILINNAGI---MGTPFMLSKDNIELQFATNHLGHFLLT 116
           A+   + +   +          +LINNAG    +G    L    I      N     +LT
Sbjct: 58  AAAAAWLAGDLLAAFVDGASRVLLINNAGTVEPIGPLATLDAAAIARAVGLNVAAPLMLT 117

Query: 117 NLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLAN 176
             L       A +     RI+++SS   R A               Y G+  Y  +K A 
Sbjct: 118 AALAQAASDAAER-----RILHISSGAARNA---------------YAGWSVYCATKAAL 157

Query: 177 ILHANELARRLKEDGVD-ITANSVHPGAIATN 207
             H    AR +  D    +   S+ PG + T 
Sbjct: 158 DHH----ARAVALDANRALRIVSLAPGVVDTG 185

Length = 243

>gnl|CDD|135631 PRK05867, PRK05867, short chain dehydrogenase; Provisional

 Score = 47.7 bits (113), Expect = 1e-06
 Identities = 57/212 (26%), Positives = 82/212 (38%), Gaps = 31/212 (14%)

Query: 4   VITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSL 63
           +ITGA++GIG   A      G  V +  R + A + + + I       KV  +  D+S  
Sbjct: 13  LITGASTGIGKRVALAYVEAGAQVAIAARHLDALEKLADEIGT--SGGKVVPVCCDVSQH 70

Query: 64  ASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQFA--TNHLGHFLLTNLLLD 121
             V +   +   +   ++I + NAGI+    ML     E Q    TN  G FL       
Sbjct: 71  QQVTSMLDQVTAELGGIDIAVCNAGIITVTPMLDMPLEEFQRLQNTNVTGVFL------- 123

Query: 122 TMKKTARKSGGEGR----IINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANI 177
           T +  A+    +G+    I   S  GH            IN P   +    Y  SK A I
Sbjct: 124 TAQAAAKAMVKQGQGGVIINTASMSGH-----------IINVPQQVS---HYCASKAAVI 169

Query: 178 LHANELARRLKEDGVDITANSVHPGAIATNII 209
                +A  L      I  NSV PG I T ++
Sbjct: 170 HLTKAMAVELAPH--KIRVNSVSPGYILTELV 199

Length = 253

>gnl|CDD|171531 PRK12481, PRK12481, 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

 Score = 47.6 bits (113), Expect = 2e-06
 Identities = 56/206 (27%), Positives = 91/206 (44%), Gaps = 27/206 (13%)

Query: 4   VITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSL 63
           +ITG  +G+G   A  LA  G  +V GV  +A   + +  +  E    K   +  DL   
Sbjct: 12  IITGCNTGLGQGMAIGLAKAGADIV-GV-GVAEAPETQAQV--EALGRKFHFITADLIQQ 67

Query: 64  ASVRNFASEYNIQHHQLNILINNAGIMGTPFML--SKDNIELQFATNHLGHFLLTNLLLD 121
             + +  S+       ++ILINNAGI+    +L     + +     N    F L+     
Sbjct: 68  KDIDSIVSQAVEVMGHIDILINNAGIIRRQDLLEFGNKDWDDVININQKTVFFLSQ---- 123

Query: 122 TMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANILHAN 181
            + K   K G  G+IIN++S    L++  GIR      PS       Y+ SK A +    
Sbjct: 124 AVAKQFVKQGNGGKIINIAS---MLSFQGGIRV-----PS-------YTASKSAVMGLTR 168

Query: 182 ELARRLKEDGVDITANSVHPGAIATN 207
            LA  L +  +++  N++ PG +AT+
Sbjct: 169 ALATELSQYNINV--NAIAPGYMATD 192

Length = 251

>gnl|CDD|180766 PRK06940, PRK06940, short chain dehydrogenase; Provisional

 Score = 47.7 bits (114), Expect = 2e-06
 Identities = 58/223 (26%), Positives = 88/223 (39%), Gaps = 42/223 (18%)

Query: 3   IVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSS 62
           +V+ GA  GIG   AR +   G  V++   +    +   +T+ +      V   E+D+SS
Sbjct: 5   VVVIGA-GGIGQAIARRVGA-GKKVLLADYNEENLEAAAKTLREA--GFDVSTQEVDVSS 60

Query: 63  LASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDT 122
             SV+  A         +  L++ AG+  +P   S+ + E     +  G    T L+L+ 
Sbjct: 61  RESVKALA-ATAQTLGPVTGLVHTAGV--SP---SQASPEAILKVDLYG----TALVLEE 110

Query: 123 MKKTARKSGGEGRIINVSSEGHR-------------------LAYHEGIRFDKINDPSGY 163
             K     GG G +I  S  GHR                   L     ++ D I D    
Sbjct: 111 FGKVI-APGGAGVVIA-SQSGHRLPALTAEQERALATTPTEELLSLPFLQPDAIEDS--- 165

Query: 164 NGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIAT 206
               AY  +K AN L     A +  E G  I  NS+ PG I+T
Sbjct: 166 --LHAYQIAKRANALRVMAEAVKWGERGARI--NSISPGIIST 204

Length = 275

>gnl|CDD|132250 TIGR03206, benzo_BadH, 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase

 Score = 47.6 bits (113), Expect = 2e-06
 Identities = 51/208 (24%), Positives = 79/208 (37%), Gaps = 30/208 (14%)

Query: 3   IVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSA--KVDAMELDL 60
            ++TG   GIG  T R  A  G  V   V D+    +  E +  +I +      A   D+
Sbjct: 6   AIVTGGGGGIGGATCRRFAEEGAKV--AVFDLNR--EAAEKVAADIRAKGGNAQAFACDI 61

Query: 61  SSLASVRNFASEYNIQHHQLNILINNAG--IMGTPFMLSKDNIELQFATNHLGHFLLTNL 118
           +   SV    +        +++L+NNAG    G          E   A N  G   + + 
Sbjct: 62  TDRDSVDTAVAAAEQALGPVDVLVNNAGWDKFGPFTKTEPPLWERLIAINLTGALHMHHA 121

Query: 119 LLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANIL 178
           +L  M +      G GRI+N++S+  R+               G +G   Y+  K   + 
Sbjct: 122 VLPGMVER-----GAGRIVNIASDAARV---------------GSSGEAVYAACKGGLVA 161

Query: 179 HANELARRLKEDGVDITANSVHPGAIAT 206
            +  +AR     G  IT N V PG   T
Sbjct: 162 FSKTMAREHARHG--ITVNVVCPGPTDT 187

Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate. Length = 250

>gnl|CDD|236099 PRK07791, PRK07791, short chain dehydrogenase; Provisional

 Score = 47.4 bits (113), Expect = 2e-06
 Identities = 44/152 (28%), Positives = 64/152 (42%), Gaps = 16/152 (10%)

Query: 3   IVITGATSGIGTETARVLALRGVHVVMGVRDI-------AAGKDVKETIVKEIPSA--KV 53
           +++TGA  GIG   A   A  G  VV  V DI       A+G    + +V EI +A  + 
Sbjct: 9   VIVTGAGGGIGRAHALAFAAEGARVV--VNDIGVGLDGSASGGSAAQAVVDEIVAAGGEA 66

Query: 54  DAMELDLSSLASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQFATN-HL-G 111
            A   D++      N           L++L+NNAGI+    + +    E       HL G
Sbjct: 67  VANGDDIADWDGAANLVDAAVETFGGLDVLVNNAGILRDRMIANMSEEEWDAVIAVHLKG 126

Query: 112 HFLLTNLLLDTMKKTARKSGG--EGRIINVSS 141
           HF          +  + K+G   + RIIN SS
Sbjct: 127 HFATLRHAAAYWRAES-KAGRAVDARIINTSS 157

Length = 286

>gnl|CDD|187636 cd08931, SDR_c9, classical (c) SDR, subgroup 9

 Score = 46.7 bits (111), Expect = 2e-06
 Identities = 39/142 (27%), Positives = 56/142 (39%), Gaps = 12/142 (8%)

Query: 3   IVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSS 62
           I ITGA SGIG ETA + A  G  V +   D      +   +  E   A      LD++ 
Sbjct: 3   IFITGAASGIGRETALLFARNGWFVGLYDIDEDGLAALAAELGAENVVAGA----LDVTD 58

Query: 63  LASVRNFASEYNIQHHQ-LNILINNAGIM-GTPF-MLSKDNIELQFATNHLGHFLLTNLL 119
            A+     +++       L+ L NNAG+  G PF  +     +     N  G        
Sbjct: 59  RAAWAAALADFAAATGGRLDALFNNAGVGRGGPFEDVPLAAHDRMVDINVKGVLNGAYAA 118

Query: 120 LDTMKKTARKSGGEGRIINVSS 141
           L  +K T        R+IN +S
Sbjct: 119 LPYLKATP-----GARVINTAS 135

This subgroup has the canonical active site tetrad and NAD-binding motif of the classical SDRs. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 227

>gnl|CDD|187642 cd08937, DHB_DH-like_SDR_c, 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase (DHB DH)-like, classical (c) SDR

 Score = 47.1 bits (112), Expect = 2e-06
 Identities = 53/208 (25%), Positives = 77/208 (37%), Gaps = 32/208 (15%)

Query: 3   IVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSS 62
           +V+TGA  GIG   A  LA  G  V++  R      +V   I+             DL +
Sbjct: 7   VVVTGAAQGIGRGVAERLAGEGARVLLVDRS-ELVHEVLAEILAA--GDAAHVHTADLET 63

Query: 63  LASVRNFASEYNIQHHQLNILINNAG--IMGTPFM-LSKDNIELQFATNHLGHFLLTNLL 119
            A  +        +  ++++LINN G  I   P+    ++ IE +   +          +
Sbjct: 64  YAGAQGVVRAAVERFGRVDVLINNVGGTIWAKPYEHYEEEQIEAEIRRSLFPTLWCCRAV 123

Query: 120 LDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLA-NIL 178
           L  M    R+    G I+NVSS   R  Y                    YS +K   N L
Sbjct: 124 LPHM--LERQQ---GVIVNVSSIATRGIYRI-----------------PYSAAKGGVNAL 161

Query: 179 HANELARRLKEDGVDITANSVHPGAIAT 206
            A+ LA     DG  I  N+V PG    
Sbjct: 162 TAS-LAFEHARDG--IRVNAVAPGGTEA 186

DHB DH (aka 1,2-dihydroxycyclohexa-3,5-diene-1-carboxylate dehydrogenase) catalyzes the NAD-dependent conversion of 1,2-dihydroxycyclohexa-3,4-diene carboxylate to a catechol. This subgroup also contains Pseudomonas putida F1 CmtB, 2,3-dihydroxy-2,3-dihydro-p-cumate dehydrogenase, the second enzyme in the pathway for catabolism of p-cumate catabolism. This subgroup shares the glycine-rich NAD-binding motif of the classical SDRs and shares the same catalytic triad; however, the upstream Asn implicated in cofactor binding or catalysis in other SDRs is generally substituted by a Ser. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 256

>gnl|CDD|234422 TIGR03971, SDR_subfam_1, oxidoreductase, SDR family

 Score = 47.1 bits (112), Expect = 3e-06
 Identities = 57/225 (25%), Positives = 92/225 (40%), Gaps = 34/225 (15%)

Query: 5   ITGATSGIGTETARVLALRG-----VHVVMGVRD-----IAAGKDVKETI-VKEIPSAKV 53
           ITGA  G G   A  LA  G     + +   + D     +A  +D+ ET  + E    KV
Sbjct: 8   ITGAARGQGRAHAVRLAAEGADIIAIDLCAPLSDYPTYPLATREDLDETARLVEALGRKV 67

Query: 54  DAMELDLSSLASVRNFASEYNIQHHQLNILINNAGIM--GTPFMLSKDNIELQFATNHLG 111
            A + D+  LA VR    +   Q  +L++++ NAG++  G  + LS++  +     N  G
Sbjct: 68  LARKADVRDLAEVRAVVEDGVEQFGRLDVVVANAGVLSYGRSWELSEEQWDTVLDINLTG 127

Query: 112 HFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQ 171
            +     ++  M    R +GG   II  SS               +       G   Y+ 
Sbjct: 128 VWRTCKAVVPHM--IERGNGGS--IIITSS---------------VAGLKALPGLAHYAA 168

Query: 172 SKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRHNSLFR 216
           +K   +     LA  L E G  I  NS+HP ++ T +I   ++  
Sbjct: 169 AKHGLVGLTKTLANELAEYG--IRVNSIHPYSVDTPMIAPEAMRE 211

Members of this protein subfamily are putative oxidoreductases belonging to the larger SDR family. Members of the present subfamily may occur several to a genome and are largely restricted to genomes that contain members of families TIGR03962, TIGR03967, and TIGR03969. Many members have been annotated by homology as carveol dehydrogenases. Length = 265

>gnl|CDD|180604 PRK06523, PRK06523, short chain dehydrogenase; Provisional

 Score = 46.8 bits (112), Expect = 3e-06
 Identities = 53/210 (25%), Positives = 80/210 (38%), Gaps = 42/210 (20%)

Query: 4   VITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMEL---DL 60
           ++TG T GIG  T   L   G  VV              T  +  P    + +E    DL
Sbjct: 13  LVTGGTKGIGAATVARLLEAGARVV--------------TTARSRPDDLPEGVEFVAADL 58

Query: 61  SSLASVRNFASEYNIQHHQLNILINNAGIMGTP---FM-LSKDNIELQFATNHLGHFLLT 116
           ++       A     +   ++IL++  G    P   F  L+ +  + +   N L    L 
Sbjct: 59  TTAEGCAAVARAVLERLGGVDILVHVLGGSSAPAGGFAALTDEEWQDELNLNLLAAVRLD 118

Query: 117 NLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLAN 176
             LL  M   AR SG    II+V+S   RL   E                 AY+ +K A 
Sbjct: 119 RALLPGM--IARGSGV---IIHVTSIQRRLPLPE--------------STTAYAAAKAAL 159

Query: 177 ILHANELARRLKEDGVDITANSVHPGAIAT 206
             ++  L++ +   GV +  N+V PG I T
Sbjct: 160 STYSKSLSKEVAPKGVRV--NTVSPGWIET 187

Length = 260

>gnl|CDD|171820 PRK12936, PRK12936, 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed

 Score = 46.8 bits (111), Expect = 3e-06
 Identities = 55/205 (26%), Positives = 88/205 (42%), Gaps = 29/205 (14%)

Query: 4   VITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSL 63
           ++TGA+ GIG E AR+L  +G   ++G+      K   E +  E+   +V     +LS  
Sbjct: 10  LVTGASGGIGEEIARLLHAQG--AIVGLHGTRVEK--LEALAAEL-GERVKIFPANLSDR 64

Query: 64  ASVRNFASEYNIQHHQLNILINNAGIM--GTPFMLSKDNIELQFATNHLGHFLLTNLLLD 121
             V+    +       ++IL+NNAGI   G    +S ++ +     N    F LT  L  
Sbjct: 65  DEVKALGQKAEADLEGVDILVNNAGITKDGLFVRMSDEDWDSVLEVNLTATFRLTRELTH 124

Query: 122 TMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANILHAN 181
            M +  R+    GRIIN++S               +   +G  G   Y  SK   I  + 
Sbjct: 125 PMMR--RRY---GRIINITS---------------VVGVTGNPGQANYCASKAGMIGFSK 164

Query: 182 ELARRLKEDGVDITANSVHPGAIAT 206
            LA+ +     ++T N V PG I +
Sbjct: 165 SLAQEIATR--NVTVNCVAPGFIES 187

Length = 245

>gnl|CDD|180753 PRK06924, PRK06924, short chain dehydrogenase; Provisional

 Score = 46.6 bits (111), Expect = 4e-06
 Identities = 56/224 (25%), Positives = 94/224 (41%), Gaps = 39/224 (17%)

Query: 3   IVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSS 62
           ++ITG + G+G   A  L  +G HV+     I+  ++ + T + E  ++ +    LDL  
Sbjct: 4   VIITGTSQGLGEAIANQLLEKGTHVI----SISRTENKELTKLAEQYNSNLTFHSLDLQD 59

Query: 63  LASVRNFASEYNIQHHQLNI----LINNAGIMGTPF----MLSKDNIELQFATNHLGHFL 114
           +  +    +E      + N+    LINNAG++  P         + +      N L   +
Sbjct: 60  VHELETNFNEILSSIQEDNVSSIHLINNAGMV-APIKPIEKAESEELITNVHLNLLAPMI 118

Query: 115 LTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKL 174
           LT+     MK T      + R+IN+SS   +             +P  Y G+ AY  SK 
Sbjct: 119 LTSTF---MKHTKDWK-VDKRVINISSGAAK-------------NP--YFGWSAYCSSKA 159

Query: 175 ANILHANELA--RRLKEDGVDITANSVHPGAIATNI---IRHNS 213
              +    +A  +  +E  V I A    PG + TN+   IR +S
Sbjct: 160 GLDMFTQTVATEQEEEEYPVKIVA--FSPGVMDTNMQAQIRSSS 201

Length = 251

>gnl|CDD|236040 PRK07523, PRK07523, gluconate 5-dehydrogenase; Provisional

 Score = 46.3 bits (110), Expect = 4e-06
 Identities = 40/148 (27%), Positives = 68/148 (45%), Gaps = 13/148 (8%)

Query: 4   VITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSL 63
           ++TG++ GIG   A  LA  G  V++  RD A      E++  +       A+  D++  
Sbjct: 14  LVTGSSQGIGYALAEGLAQAGAEVILNGRDPAKLAAAAESLKGQ--GLSAHALAFDVTDH 71

Query: 64  ASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNL--LLD 121
            +VR     +  +   ++IL+NNAG      M  +  +E  F  +     L TN+  +  
Sbjct: 72  DAVRAAIDAFEAEIGPIDILVNNAG------MQFRTPLE-DFPADAFERLLRTNISSVFY 124

Query: 122 TMKKTARK--SGGEGRIINVSSEGHRLA 147
             +  AR   + G G+IIN++S    LA
Sbjct: 125 VGQAVARHMIARGAGKIINIASVQSALA 152

Length = 255

>gnl|CDD|237188 PRK12745, PRK12745, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 46.1 bits (110), Expect = 6e-06
 Identities = 48/209 (22%), Positives = 77/209 (36%), Gaps = 25/209 (11%)

Query: 4   VITGATSGIGTETARVLALRGVHV-VMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSS 62
           ++TG   GIG   AR LA  G  + +    D       ++ +       +V     D++ 
Sbjct: 6   LVTGGRRGIGLGIARALAAAGFDLAINDRPDDEELAATQQELRAL--GVEVIFFPADVAD 63

Query: 63  LASVRNFASEYNIQHHQLNILINNAGI----MGTPFMLSKDNIELQFATNHLGHFLLTNL 118
           L++             +++ L+NNAG+     G    L+ ++ +   A N  G F LT  
Sbjct: 64  LSAHEAMLDAAQAAWGRIDCLVNNAGVGVKVRGDLLDLTPESFDRVLAINLRGPFFLTQA 123

Query: 119 LLDTM-KKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANI 177
           +   M  +   +      I+ VSS    +      R +             Y  SK    
Sbjct: 124 VAKRMLAQPEPEELPHRSIVFVSSVNAIMVSPN--RGE-------------YCISKAGLS 168

Query: 178 LHANELARRLKEDGVDITANSVHPGAIAT 206
           + A   A RL E+G  I    V PG I T
Sbjct: 169 MAAQLFAARLAEEG--IGVYEVRPGLIKT 195

Length = 256

>gnl|CDD|180439 PRK06171, PRK06171, sorbitol-6-phosphate 2-dehydrogenase; Provisional

 Score = 45.8 bits (109), Expect = 6e-06
 Identities = 40/151 (26%), Positives = 64/151 (42%), Gaps = 27/151 (17%)

Query: 3   IVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSS 62
           I++TG +SGIG    + L   G +VV    DI  G    E             +  D+SS
Sbjct: 12  IIVTGGSSGIGLAIVKELLANGANVVNA--DIHGGDGQHE---------NYQFVPTDVSS 60

Query: 63  LASVRNFASEYNIQHHQLNILINNAGIMG-----------TPFMLSKDNIELQFATNHLG 111
              V +  +E   +  +++ L+NNAGI               + L++   +  F  N  G
Sbjct: 61  AEEVNHTVAEIIEKFGRIDGLVNNAGINIPRLLVDEKDPAGKYELNEAAFDKMFNINQKG 120

Query: 112 HFLLTNLLLDTMKKTARKSGGEGRIINVSSE 142
            FL++  +   M K       +G I+N+SSE
Sbjct: 121 VFLMSQAVARQMVKQ-----HDGVIVNMSSE 146

Length = 266

>gnl|CDD|235794 PRK06398, PRK06398, aldose dehydrogenase; Validated

 Score = 45.2 bits (107), Expect = 1e-05
 Identities = 35/141 (24%), Positives = 61/141 (43%), Gaps = 20/141 (14%)

Query: 3   IVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSS 62
            ++TG + GIG      L   G +V+    +           +KE     VD  ++D+S+
Sbjct: 9   AIVTGGSQGIGKAVVNRLKEEGSNVI----NFD---------IKEPSYNDVDYFKVDVSN 55

Query: 63  LASVRNFASEYNIQHHQLNILINNAGI--MGTPFMLSKDNIELQFATNHLGHFLLTNLLL 120
              V         ++ +++IL+NNAGI   G    + +D  +     N  G FL++   +
Sbjct: 56  KEQVIKGIDYVISKYGRIDILVNNAGIESYGAIHAVEEDEWDRIINVNVNGIFLMSKYTI 115

Query: 121 DTMKKTARKSGGEGRIINVSS 141
             M K       +G IIN++S
Sbjct: 116 PYMLKQ-----DKGVIINIAS 131

Length = 258

>gnl|CDD|187615 cd05357, PR_SDR_c, pteridine reductase (PR), classical (c) SDRs

 Score = 44.2 bits (105), Expect = 2e-05
 Identities = 49/212 (23%), Positives = 72/212 (33%), Gaps = 42/212 (19%)

Query: 3   IVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMEL--DL 60
            ++TGA   IG   A  LA  G  VV+      A       +  E+ + +  A+ +  DL
Sbjct: 3   ALVTGAAKRIGRAIAEALAAEGYRVVVHYNRSEAEAQ---RLKDELNALRNSAVLVQADL 59

Query: 61  SSLASVRNFASEYNIQHHQLNILINNAGIM--GTPFMLSKDNIELQFATNHLGHFLLTNL 118
           S  A+  +  +       + ++L+NNA           S+D     F  N    +LL   
Sbjct: 60  SDFAACADLVAAAFRAFGRCDVLVNNASAFYPTPLGQGSEDAWAELFGINLKAPYLLI-- 117

Query: 119 LLDTMKKTAR--KSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSK--L 174
                +  AR       G IIN+                         G+ AY  SK  L
Sbjct: 118 -----QAFARRLAGSRNGSIINIID---------------AMTDRPLTGYFAYCMSKAAL 157

Query: 175 ANI--LHANELARRLKEDGVDITANSVHPGAI 204
             +    A ELA         I  N + PG I
Sbjct: 158 EGLTRSAALELAPN-------IRVNGIAPGLI 182

Pteridine reductases (PRs), members of the SDR family, catalyzes the NAD-dependent reduction of folic acid, dihydrofolate and related compounds. In Leishmania, pteridine reductase (PTR1) acts to circumvent the anti-protozoan drugs that attack dihydrofolate reductase activity. Proteins in this subgroup have an N-terminal NAD-binding motif and a YxxxK active site motif, but have an Asp instead of the usual upstream catalytic Ser. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 234

>gnl|CDD|184025 PRK13394, PRK13394, 3-hydroxybutyrate dehydrogenase; Provisional

 Score = 44.1 bits (104), Expect = 2e-05
 Identities = 40/144 (27%), Positives = 59/144 (40%), Gaps = 16/144 (11%)

Query: 4   VITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSL 63
           V+TGA SGIG E A  LA  G  V +   +      V + I K     K   + +D+++ 
Sbjct: 11  VVTGAASGIGKEIALELARAGAAVAIADLNQDGANAVADEINKA--GGKAIGVAMDVTNE 68

Query: 64  ASVRNFASEYNIQHHQLNILINNAGIM------GTPFMLSKDNIELQFATNHLGHFLLTN 117
            +V     +   +   ++IL++NAGI          F   K       A +  G FL T 
Sbjct: 69  DAVNAGIDKVAERFGSVDILVSNAGIQIVNPIENYSFADWKKMQ----AIHVDGAFLTTK 124

Query: 118 LLLDTMKKTARKSGGEGRIINVSS 141
             L  M K  R     G +I + S
Sbjct: 125 AALKHMYKDDRG----GVVIYMGS 144

Length = 262

>gnl|CDD|219957 pfam08659, KR, KR domain

 Score = 43.3 bits (103), Expect = 2e-05
 Identities = 27/99 (27%), Positives = 48/99 (48%), Gaps = 4/99 (4%)

Query: 4   VITGATSGIGTETARVLALRG-VHVVMGVRDIAAGKDVKETIVKEIPS--AKVDAMELDL 60
           ++TG   G+G E AR LA RG  H+V+  R  A   + +  +  E+ +  A+V  +  D+
Sbjct: 4   LVTGGLGGLGLELARWLAERGARHLVLLSRSGAPDPEAEALL-AELEARGAEVTVVACDV 62

Query: 61  SSLASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKD 99
           S   +VR   +E       L  +I+ AG++    + +  
Sbjct: 63  SDRDAVRALLAEIRADGPPLRGVIHAAGVLRDALLANMT 101

This enzymatic domain is part of bacterial polyketide synthases and catalyzes the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. Length = 181

>gnl|CDD|181518 PRK08643, PRK08643, acetoin reductase; Validated

 Score = 44.3 bits (105), Expect = 2e-05
 Identities = 59/232 (25%), Positives = 94/232 (40%), Gaps = 38/232 (16%)

Query: 4   VITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSL 63
           ++TGA  GIG   A+ L   G  V +   +    +   + + K+   A   A++ D+S  
Sbjct: 6   LVTGAGQGIGFAIAKRLVEDGFKVAIVDYNEETAQAAADKLSKDGGKAI--AVKADVSDR 63

Query: 64  ASVRNFASEYNIQHH--QLNILINNAGIM-GTPF-MLSKDNIELQFATNHLGHFLLTNLL 119
             V  FA+   +      LN+++NNAG+   TP   ++++  +  +  N  G        
Sbjct: 64  DQV--FAAVRQVVDTFGDLNVVVNNAGVAPTTPIETITEEQFDKVYNINVGGVIWGIQAA 121

Query: 120 LDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANILH 179
            +  KK     G  G+IIN +S+    A   G       +P        YS +K A    
Sbjct: 122 QEAFKKL----GHGGKIINATSQ----AGVVG-------NP----ELAVYSSTKFAVRGL 162

Query: 180 ANELARRLKEDGVDITANSVHPGAIATNIIRHNSLFRSMNTILHALPGIAGK 231
               AR L  +G  IT N+  PG + T +         M  I H +   AGK
Sbjct: 163 TQTAARDLASEG--ITVNAYAPGIVKTPM---------MFDIAHQVGENAGK 203

Length = 256

>gnl|CDD|187627 cd05369, TER_DECR_SDR_a, Trans-2-enoyl-CoA reductase (TER) and 2,4-dienoyl-CoA reductase (DECR), atypical (a) SDR

 Score = 43.7 bits (104), Expect = 3e-05
 Identities = 22/86 (25%), Positives = 35/86 (40%), Gaps = 1/86 (1%)

Query: 3  IVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSS 62
            ITG  +GIG   A+  A  G  V +  R     +   E I       +   ++ D+  
Sbjct: 6  AFITGGGTGIGKAIAKAFAELGASVAIAGRKPEVLEAAAEEISSA-TGGRAHPIQCDVRD 64

Query: 63 LASVRNFASEYNIQHHQLNILINNAG 88
            +V     E   +  +++ILINNA 
Sbjct: 65 PEAVEAAVDETLKEFGKIDILINNAA 90

TTER is a peroxisomal protein with a proposed role in fatty acid elongation. Fatty acid synthesis is known to occur in the both endoplasmic reticulum and mitochondria; peroxisomal TER has been proposed as an additional fatty acid elongation system, it reduces the double bond at C-2 as the last step of elongation. This system resembles the mitochondrial system in that acetyl-CoA is used as a carbon donor. TER may also function in phytol metabolism, reducting phytenoyl-CoA to phytanoyl-CoA in peroxisomes. DECR processes double bonds in fatty acids to increase their utility in fatty acid metabolism; it reduces 2,4-dienoyl-CoA to an enoyl-CoA. DECR is active in mitochondria and peroxisomes. This subgroup has the Gly-rich NAD-binding motif of the classical SDR family, but does not display strong identity to the canonical active site tetrad, and lacks the characteristic Tyr at the usual position. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 249

>gnl|CDD|236110 PRK07831, PRK07831, short chain dehydrogenase; Provisional

 Score = 43.9 bits (104), Expect = 3e-05
 Identities = 27/93 (29%), Positives = 48/93 (51%), Gaps = 5/93 (5%)

Query: 3   IVITGAT-SGIGTETARVLALRGVHVVMGVRDIAAG--KDVKETIVKEIPSAKVDAMELD 59
           +++T A  +GIG+ TAR     G  VV  + DI      +  + +  E+   +V+A+  D
Sbjct: 20  VLVTAAAGTGIGSATARRALEEGARVV--ISDIHERRLGETADELAAELGLGRVEAVVCD 77

Query: 60  LSSLASVRNFASEYNIQHHQLNILINNAGIMGT 92
           ++S A V         +  +L++L+NNAG+ G 
Sbjct: 78  VTSEAQVDALIDAAVERLGRLDVLVNNAGLGGQ 110

Length = 262

>gnl|CDD|181297 PRK08217, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 43.4 bits (103), Expect = 4e-05
 Identities = 56/221 (25%), Positives = 81/221 (36%), Gaps = 47/221 (21%)

Query: 3   IVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAM--ELDL 60
           IVITG   G+G   A  LA +G  + +    I   ++  E  V E  +   +      ++
Sbjct: 8   IVITGGAQGLGRAMAEYLAQKGAKLAL----IDLNQEKLEEAVAECGALGTEVRGYAANV 63

Query: 61  SSLASVRNFASEYNIQHHQLNILINNAGIMGTPFML-----------SKDNIELQFATNH 109
           +    V    ++      QLN LINNAGI+    ++           S +  +     N 
Sbjct: 64  TDEEDVEATFAQIAEDFGQLNGLINNAGILRDGLLVKAKDGKVTSKMSLEQFQSVIDVNL 123

Query: 110 LGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAY 169
            G FL        M ++  K    G IIN+SS    +A              G  G   Y
Sbjct: 124 TGVFLCGREAAAKMIESGSK----GVIINISS----IARA------------GNMGQTNY 163

Query: 170 SQSKLA----NILHANELARRLKEDGVDITANSVHPGAIAT 206
           S SK       +  A ELAR        I   ++ PG I T
Sbjct: 164 SASKAGVAAMTVTWAKELAR------YGIRVAAIAPGVIET 198

Length = 253

>gnl|CDD|187621 cd05363, SDH_SDR_c, Sorbitol dehydrogenase (SDH), classical (c) SDR

 Score = 43.4 bits (102), Expect = 4e-05
 Identities = 37/147 (25%), Positives = 67/147 (45%), Gaps = 17/147 (11%)

Query: 4   VITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSL 63
           +ITG+  GIG   A+     G  V +   ++ A +        EI  A   A+ LD++  
Sbjct: 7   LITGSARGIGRAFAQAYVREGARVAIADINLEAAR----ATAAEIGPAAC-AISLDVTDQ 61

Query: 64  ASVRNFASEYNIQHHQLNILINNAGI--MGTPFMLSKDNIELQFATNHLGHFLLTNLLLD 121
           AS+    +    +   ++IL+NNA +  +     +++++ +  FA N  G   +      
Sbjct: 62  ASIDRCVAALVDRWGSIDILVNNAALFDLAPIVDITRESYDRLFAINVSGTLFM------ 115

Query: 122 TMKKTARK---SGGEGRIINVSSEGHR 145
            M+  AR     G  G+IIN++S+  R
Sbjct: 116 -MQAVARAMIAQGRGGKIINMASQAGR 141

This bacterial subgroup includes Rhodobacter sphaeroides SDH, and other SDHs. SDH preferentially interconverts D-sorbitol (D-glucitol) and D-fructose, but also interconverts L-iditol/L-sorbose and galactitol/D-tagatose. SDH is NAD-dependent and is a dimeric member of the SDR family. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 254

>gnl|CDD|235853 PRK06701, PRK06701, short chain dehydrogenase; Provisional

 Score = 43.5 bits (103), Expect = 4e-05
 Identities = 63/221 (28%), Positives = 88/221 (39%), Gaps = 54/221 (24%)

Query: 5   ITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKET---IVKEIPSAKVDAMELDLS 61
           ITG  SGIG   A + A  G  + +   D    +D  ET   + KE    K   +  D+S
Sbjct: 51  ITGGDSGIGRAVAVLFAKEGADIAIVYLD--EHEDANETKQRVEKE--GVKCLLIPGDVS 106

Query: 62  SLASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIE--------LQFATNHLGHF 113
             A  ++   E   +  +L+IL+NNA      F   + ++E          F TN   +F
Sbjct: 107 DEAFCKDAVEETVRELGRLDILVNNAA-----FQYPQQSLEDITAEQLDKTFKTNIYSYF 161

Query: 114 LLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRA---YS 170
            +T   L  +     K G    IIN  S               I    GY G      YS
Sbjct: 162 HMTKAALPHL-----KQGSA--IINTGS---------------IT---GYEGNETLIDYS 196

Query: 171 QSKLANILHA--NELARRLKEDGVDITANSVHPGAIATNII 209
            +K A  +HA    LA+ L + G  I  N+V PG I T +I
Sbjct: 197 ATKGA--IHAFTRSLAQSLVQKG--IRVNAVAPGPIWTPLI 233

Length = 290

>gnl|CDD|235713 PRK06139, PRK06139, short chain dehydrogenase; Provisional

 Score = 43.6 bits (103), Expect = 4e-05
 Identities = 28/87 (32%), Positives = 46/87 (52%), Gaps = 2/87 (2%)

Query: 3  IVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSS 62
          +VITGA+SGIG  TA   A RG  +V+  RD  A + V E        A+V  +  D++ 
Sbjct: 10 VVITGASSGIGQATAEAFARRGARLVLAARDEEALQAVAEECRAL--GAEVLVVPTDVTD 67

Query: 63 LASVRNFASEYNIQHHQLNILINNAGI 89
             V+  A++      ++++ +NN G+
Sbjct: 68 ADQVKALATQAASFGGRIDVWVNNVGV 94

Length = 330

>gnl|CDD|181324 PRK08251, PRK08251, short chain dehydrogenase; Provisional

 Score = 43.0 bits (102), Expect = 5e-05
 Identities = 27/87 (31%), Positives = 45/87 (51%)

Query: 3  IVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSS 62
          I+ITGA+SG+G   AR  A +G  + +  R     +++K  ++   P  KV    LD++ 
Sbjct: 5  ILITGASSGLGAGMAREFAAKGRDLALCARRTDRLEELKAELLARYPGIKVAVAALDVND 64

Query: 63 LASVRNFASEYNIQHHQLNILINNAGI 89
             V    +E+  +   L+ +I NAGI
Sbjct: 65 HDQVFEVFAEFRDELGGLDRVIVNAGI 91

Length = 248

>gnl|CDD|181044 PRK07577, PRK07577, short chain dehydrogenase; Provisional

 Score = 42.8 bits (101), Expect = 6e-05
 Identities = 54/211 (25%), Positives = 83/211 (39%), Gaps = 41/211 (19%)

Query: 3   IVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSS 62
           +++TGAT GIG   +  LA  G  V+ G+   A      E    ++   +  A     ++
Sbjct: 6   VLVTGATKGIGLALSLRLANLGHQVI-GIARSAIDDFPGELFACDLADIEQTA-----AT 59

Query: 63  LASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLG---HFLLTNLL 119
           LA +         + H ++ ++NN GI   P  L K ++        L       +T   
Sbjct: 60  LAQIN--------EIHPVDAIVNNVGIA-LPQPLGKIDLAALQDVYDLNVRAAVQVTQAF 110

Query: 120 LDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANILH 179
           L+ MK        +GRI+N+ S     A              G     +YS +K A +  
Sbjct: 111 LEGMKLR-----EQGRIVNICS----RAIF------------GALDRTSYSAAKSALVGC 149

Query: 180 ANELARRLKEDGVDITANSVHPGAIATNIIR 210
               A  L E G  IT N+V PG I T + R
Sbjct: 150 TRTWALELAEYG--ITVNAVAPGPIETELFR 178

Length = 234

>gnl|CDD|236145 PRK08063, PRK08063, enoyl-(acyl carrier protein) reductase; Provisional

 Score = 42.8 bits (101), Expect = 7e-05
 Identities = 47/212 (22%), Positives = 88/212 (41%), Gaps = 29/212 (13%)

Query: 4   VITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPS--AKVDAMELDLS 61
           ++TG++ GIG   A  LA  G  + +   + A  +   E   +EI +   K  A++ ++ 
Sbjct: 8   LVTGSSRGIGKAIALRLAEEGYDIAV---NYARSRKAAEETAEEIEALGRKALAVKANVG 64

Query: 62  SLASVRNFASEYNIQHHQLNILINNA--GIMGTPFMLSKDNIELQFATNHLGHFLLTNLL 119
            +  ++   ++ + +  +L++ +NNA  G++     L + + +     N           
Sbjct: 65  DVEKIKEMFAQIDEEFGRLDVFVNNAASGVLRPAMELEESHWDWTMNINAKALLFCAQEA 124

Query: 120 LDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANILH 179
              M+K      G G+II++SS G        IR+           +     SK A    
Sbjct: 125 AKLMEKV-----GGGKIISLSSLG-------SIRY--------LENYTTVGVSKAALEAL 164

Query: 180 ANELARRLKEDGVDITANSVHPGAIATNIIRH 211
              LA  L   G  I  N+V  GA+ T+ ++H
Sbjct: 165 TRYLAVELAPKG--IAVNAVSGGAVDTDALKH 194

Length = 250

>gnl|CDD|182531 PRK10538, PRK10538, malonic semialdehyde reductase; Provisional

 Score = 42.4 bits (100), Expect = 9e-05
 Identities = 38/156 (24%), Positives = 69/156 (44%), Gaps = 17/156 (10%)

Query: 1   MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAG--KDVKETIVKEIPSAKVDAMEL 58
           M +++TGAT+G G    R    +G H V     IA G  ++  + +  E+    +   +L
Sbjct: 1   MIVLVTGATAGFGECITRRFIQQG-HKV-----IATGRRQERLQELKDEL-GDNLYIAQL 53

Query: 59  DLSSLASVRNFASEYNIQHHQLNILINNAGI---MGTPFMLSKDNIELQFATNHLGHFLL 115
           D+ + A++    +    +   +++L+NNAG+   +      S ++ E    TN+ G   +
Sbjct: 54  DVRNRAAIEEMLASLPAEWRNIDVLVNNAGLALGLEPAHKASVEDWETMIDTNNKGLVYM 113

Query: 116 TNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEG 151
           T  +L  M +        G IIN+ S      Y  G
Sbjct: 114 TRAVLPGMVERNH-----GHIINIGSTAGSWPYAGG 144

Length = 248

>gnl|CDD|181605 PRK08993, PRK08993, 2-deoxy-D-gluconate 3-dehydrogenase; Validated

 Score = 42.2 bits (99), Expect = 9e-05
 Identities = 51/213 (23%), Positives = 89/213 (41%), Gaps = 41/213 (19%)

Query: 4   VITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSL 63
           V+TG  +G+G   A  LA  G  +V G+ +I    +  E +       +  ++  DL  +
Sbjct: 14  VVTGCDTGLGQGMALGLAEAGCDIV-GI-NIVEPTETIEQV--TALGRRFLSLTADLRKI 69

Query: 64  ASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNL----- 118
             +         +   ++IL+NNAG++       +    ++F+       +  N+     
Sbjct: 70  DGIPALLERAVAEFGHIDILVNNAGLI-------RREDAIEFSEKDWDDVMNLNIKSVFF 122

Query: 119 LLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANI- 177
           +     K     G  G+IIN++S    L++  GIR      PS       Y+ SK   + 
Sbjct: 123 MSQAAAKHFIAQGNGGKIINIAS---MLSFQGGIRV-----PS-------YTASKSGVMG 167

Query: 178 ---LHANELARRLKEDGVDITANSVHPGAIATN 207
              L ANE A+       +I  N++ PG +ATN
Sbjct: 168 VTRLMANEWAKH------NINVNAIAPGYMATN 194

Length = 253

>gnl|CDD|181349 PRK08278, PRK08278, short chain dehydrogenase; Provisional

 Score = 41.8 bits (99), Expect = 1e-04
 Identities = 54/218 (24%), Positives = 84/218 (38%), Gaps = 30/218 (13%)

Query: 3   IVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETI---VKEIPSAKVDAM--E 57
           + ITGA+ GIG   A   A  G ++V+  +       +  TI    +EI +A   A+   
Sbjct: 9   LFITGASRGIGLAIALRAARDGANIVIAAKTAEPHPKLPGTIHTAAEEIEAAGGQALPLV 68

Query: 58  LDLSSLASVRNFASEYNIQHH-QLNILINNAG-IMGTPF-MLSKDNIELQFATNHLGHFL 114
            D+     V   A    ++    ++I +NNA  I  T          +L    N  G FL
Sbjct: 69  GDVRDEDQVAA-AVAKAVERFGGIDICVNNASAINLTGTEDTPMKRFDLMQQINVRGTFL 127

Query: 115 LTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKL 174
           ++   L  +KK              S   H L     +      DP  +    AY+ +K 
Sbjct: 128 VSQACLPHLKK--------------SENPHILTLSPPLNL----DPKWFAPHTAYTMAKY 169

Query: 175 ANILHANELARRLKEDGVDITANSVHP-GAIATNIIRH 211
              L    LA   ++DG  I  N++ P   IAT  +R+
Sbjct: 170 GMSLCTLGLAEEFRDDG--IAVNALWPRTTIATAAVRN 205

Length = 273

>gnl|CDD|236209 PRK08265, PRK08265, short chain dehydrogenase; Provisional

 Score = 41.9 bits (99), Expect = 1e-04
 Identities = 18/84 (21%), Positives = 36/84 (42%), Gaps = 5/84 (5%)

Query: 4  VITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSL 63
          ++TG  + IG   AR L   G  V +   D   G  V  ++       +   +  D++  
Sbjct: 10 IVTGGATLIGAAVARALVAAGARVAIVDIDADNGAAVAASL-----GERARFIATDITDD 64

Query: 64 ASVRNFASEYNIQHHQLNILINNA 87
          A++    +    +  +++IL+N A
Sbjct: 65 AAIERAVATVVARFGRVDILVNLA 88

Length = 261

>gnl|CDD|187583 cd05322, SDH_SDR_c_like, Sorbitol 6-phosphate dehydrogenase (SDH), classical (c) SDRs

 Score = 41.7 bits (98), Expect = 1e-04
 Identities = 47/208 (22%), Positives = 84/208 (40%), Gaps = 37/208 (17%)

Query: 3   IVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPS---AKVDAMELD 59
           +VI G  + +G      LA  G  V   V DI    +  E +  EI +    K      D
Sbjct: 6   VVIGGGQT-LGEFLCHGLAEAGYDVA--VADI--NSENAEKVADEINAEYGEKAYGFGAD 60

Query: 60  LSSLASVRNFASEYNIQHHQLNILINNAGIMGTPFMLS--KDNIELQFATNHLGHFLLTN 117
            ++  SV   +   +    ++++L+ +AGI  +  +      + +     N +G+FL   
Sbjct: 61  ATNEQSVIALSKGVDEIFKRVDLLVYSAGIAKSAKITDFELGDFDRSLQVNLVGYFL--- 117

Query: 118 LLLDTMKKTAR---KSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKL 174
                 ++ ++   + G +GRII ++S+  ++              S +N    YS +K 
Sbjct: 118 ----CAREFSKLMIRDGIQGRIIQINSKSGKVG-------------SKHNS--GYSAAKF 158

Query: 175 ANILHANELARRLKEDGVDITANSVHPG 202
             +     LA  L E G  IT NS+  G
Sbjct: 159 GGVGLTQSLALDLAEHG--ITVNSLMLG 184

Sorbitol 6-phosphate dehydrogenase (SDH, aka glucitol 6-phosphate dehydrogenase) catalyzes the NAD-dependent interconversion of D-fructose 6-phosphate to D-sorbitol 6-phosphate. SDH is a member of the classical SDRs, with the characteristic catalytic tetrad, but without a complete match to the typical NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257

>gnl|CDD|223528 COG0451, WcaG, Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

 Score = 41.1 bits (96), Expect = 3e-04
 Identities = 42/196 (21%), Positives = 64/196 (32%), Gaps = 30/196 (15%)

Query: 1   MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDL 60
           M I++TG    IG+     L   G  V  G+  +  G D           + V+ + LDL
Sbjct: 1   MRILVTGGAGFIGSHLVERLLAAGHDVR-GLDRLRDGLDPLL--------SGVEFVVLDL 51

Query: 61  SSLASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLL 120
           +    V   A          + +I+ A     P   +  +       N  G     NLL 
Sbjct: 52  TDRDLVDELAKGVP------DAVIHLAAQSSVP-DSNASDPAEFLDVNVDG---TLNLL- 100

Query: 121 DTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANILHA 180
               + AR +G + R +  SS    + Y +        D         Y  SKLA     
Sbjct: 101 ----EAARAAGVK-RFVFASSVS--VVYGDPPPLPIDEDLGPPRPLNPYGVSKLAAEQLL 153

Query: 181 NELARRLKEDGVDITA 196
              AR     G+ +  
Sbjct: 154 RAYARL---YGLPVVI 166

Length = 314

>gnl|CDD|183772 PRK12823, benD, 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional

 Score = 40.7 bits (96), Expect = 3e-04
 Identities = 43/152 (28%), Positives = 67/152 (44%), Gaps = 31/152 (20%)

Query: 3   IVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMEL--DL 60
           +V+TGA  GIG   A   A  G  VV+  R      ++   +  E+ +A  +A+ L  DL
Sbjct: 11  VVVTGAAQGIGRGVALRAAAEGARVVLVDR-----SELVHEVAAELRAAGGEALALTADL 65

Query: 61  SSLA---SVRNFASEYNIQHHQLNILINNAG--IMGTPFM-LSKDNIELQ-----FATNH 109
            + A   +    A E      ++++LINN G  I   PF    ++ IE +     F T  
Sbjct: 66  ETYAGAQAAMAAAVE---AFGRIDVLINNVGGTIWAKPFEEYEEEQIEAEIRRSLFPTLW 122

Query: 110 LGHFLLTNLLLDTMKKTARKSGGEGRIINVSS 141
               +L ++L          + G G I+NVSS
Sbjct: 123 CCRAVLPHML----------AQGGGAIVNVSS 144

Length = 260

>gnl|CDD|187607 cd05349, BKR_2_SDR_c, putative beta-ketoacyl acyl carrier protein [ACP]reductase (BKR), subgroup 2, classical (c) SDR

 Score = 40.5 bits (95), Expect = 4e-04
 Identities = 47/216 (21%), Positives = 83/216 (38%), Gaps = 42/216 (19%)

Query: 3   IVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSS 62
           +++TGA+ G+G   AR  A  G  VV+   +     +  E +  E    +  A++ D+  
Sbjct: 3   VLVTGASRGLGAAIARSFAREGARVVV---NYYRSTESAEAVAAEA-GERAIAIQADVRD 58

Query: 63  LASVRNFASEYNIQHHQLNILINNAGIMGTPFM----LSKDNIELQFATNHL-----GHF 113
              V+    E       ++ ++NNA ++  PF      + D I+ +     L     G  
Sbjct: 59  RDQVQAMIEEAKNHFGPVDTIVNNA-LIDFPFDPDQRKTFDTIDWEDYQQQLEGAVKGAL 117

Query: 114 LLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLA---YHEGIRFDKINDPSGYNGFRAYS 170
            L   +L   K+      G GR+IN+ +   +     YH+                  Y+
Sbjct: 118 NLLQAVLPDFKER-----GSGRVINIGTNLFQNPVVPYHD------------------YT 154

Query: 171 QSKLANILHANELARRLKEDGVDITANSVHPGAIAT 206
            +K A +     +A+ L   G  IT N V  G +  
Sbjct: 155 TAKAALLGFTRNMAKELGPYG--ITVNMVSGGLLKV 188

This subgroup includes Rhizobium sp. NGR234 FabG1. The Escherichai coli K12 BKR, FabG, belongs to a different subgroup. BKR catalyzes the NADPH-dependent reduction of ACP in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of four elongation steps, which are repeated to extend the fatty acid chain through the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and a final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I FAS utilizes one or two multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 246

>gnl|CDD|187535 cd02266, SDR, Short-chain dehydrogenases/reductases (SDR)

 Score = 39.8 bits (93), Expect = 4e-04
 Identities = 44/206 (21%), Positives = 62/206 (30%), Gaps = 70/206 (33%)

Query: 3   IVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSS 62
           +++TG + GIG   AR LA RG                         S KV         
Sbjct: 1   VLVTGGSGGIGGAIARWLASRG-------------------------SPKV--------- 26

Query: 63  LASVRNFASEYNIQHHQLNILINNAGI--MGTPFMLSKDNIELQFATNHLGHFLLTNLLL 120
              +     +          +++NA I   G    L+   IE     N +G   L     
Sbjct: 27  ---LVVSRRDV---------VVHNAAILDDGRLIDLTGSRIERAIRANVVGTRRLLEAAR 74

Query: 121 DTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANILHA 180
           + MK         GR I +SS                    G  G   Y+ SK A    A
Sbjct: 75  ELMKAK-----RLGRFILISSVAGLF---------------GAPGLGGYAASKAALDGLA 114

Query: 181 NELARRLKEDGVDITANSVHPGAIAT 206
            + A     +G  + A +V  G  A 
Sbjct: 115 QQWASEGWGNG--LPATAVACGTWAG 138

SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase (KR) domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type KRs have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 186

>gnl|CDD|235633 PRK05872, PRK05872, short chain dehydrogenase; Provisional

 Score = 40.3 bits (95), Expect = 4e-04
 Identities = 24/86 (27%), Positives = 43/86 (50%), Gaps = 3/86 (3%)

Query: 4  VITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSL 63
          V+TGA  GIG E AR L  RG  + +   + A    +   +       +V  +  D++ L
Sbjct: 13 VVTGAARGIGAELARRLHARGAKLALVDLEEAELAALAAELG---GDDRVLTVVADVTDL 69

Query: 64 ASVRNFASEYNIQHHQLNILINNAGI 89
          A+++  A E   +   +++++ NAGI
Sbjct: 70 AAMQAAAEEAVERFGGIDVVVANAGI 95

Length = 296

>gnl|CDD|222146 pfam13460, NAD_binding_10, NADH(P)-binding

 Score = 39.6 bits (93), Expect = 4e-04
 Identities = 16/65 (24%), Positives = 24/65 (36%), Gaps = 11/65 (16%)

Query: 3  IVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSS 62
          I + GAT   G    + L  RG  V    R+             + P+  V  ++ DL  
Sbjct: 1  IAVIGATGKTGRRLVKELLARGHQVTALSRN-----------PSKAPAPGVTPVQKDLFD 49

Query: 63 LASVR 67
          LA + 
Sbjct: 50 LADLA 54

Length = 182

>gnl|CDD|187656 cd08953, KR_2_SDR_x, ketoreductase (KR), subgroup 2, complex (x) SDRs

 Score = 40.4 bits (95), Expect = 5e-04
 Identities = 22/105 (20%), Positives = 48/105 (45%), Gaps = 4/105 (3%)

Query: 4   VITGATSGIGTETARVLALR-GVHVVM-GVRDIAAGKDVKETIVKEIPSAKVDAM--ELD 59
           ++TG   GIG   AR LA R G  +V+ G   +   ++ K   +  + +     +    D
Sbjct: 209 LVTGGAGGIGRALARALARRYGARLVLLGRSPLPPEEEWKAQTLAALEALGARVLYISAD 268

Query: 60  LSSLASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQ 104
           ++  A+VR    +   ++  ++ +I+ AG++    +  K   + +
Sbjct: 269 VTDAAAVRRLLEKVRERYGAIDGVIHAAGVLRDALLAQKTAEDFE 313

Ketoreductase, a module of the multidomain polyketide synthase (PKS), has 2 subdomains, each corresponding to a SDR family monomer. The C-terminal subdomain catalyzes the NADPH-dependent reduction of the beta-carbonyl of a polyketide to a hydroxyl group, a step in the biosynthesis of polyketides, such as erythromycin. The N-terminal subdomain, an interdomain linker, is a truncated Rossmann fold which acts to stabilizes the catalytic subdomain. Unlike typical SDRs, the isolated domain does not oligomerize but is composed of 2 subdomains, each resembling an SDR monomer. The active site resembles that of typical SDRs, except that the usual positions of the catalytic Asn and Tyr are swapped, so that the canonical YXXXK motif changes to YXXXN. Modular PKSs are multifunctional structures in which the makeup recapitulates that found in (and may have evolved from) FAS. Polyketide synthesis also proceeds via the addition of 2-carbon units as in fatty acid synthesis. The complex SDR NADP-binding motif, GGXGXXG, is often present, but is not strictly conserved in each instance of the module. This subfamily includes both KR domains of the Bacillus subtilis Pks J,-L, and PksM, and all three KR domains of PksN, components of the megacomplex bacillaene synthase, which synthesizes the antibiotic bacillaene. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type KRs have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 436

>gnl|CDD|212496 cd11730, Tthb094_like_SDR_c, Tthb094 and related proteins, classical (c) SDRs

 Score = 39.8 bits (93), Expect = 5e-04
 Identities = 50/204 (24%), Positives = 72/204 (35%), Gaps = 39/204 (19%)

Query: 5   ITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLA 64
           I GAT GIG   AR LA RG  +++  RD  A       +  E+ +    A   D+++  
Sbjct: 3   ILGATGGIGRALARALAGRGWRLLLSGRDAGA----LAGLAAEVGALARPA---DVAAEL 55

Query: 65  SVRNFASEYNIQHHQLNILINNAG-IMGTPFM-LSKDNIELQFATNHLGHFLLTNLLLDT 122
            V   A E         +L+  AG I+G P               N  G  L+    L  
Sbjct: 56  EVWALAQELGPLD----LLVYAAGAILGKPLARTKPAAWRRILDANLTGAALVLKHALAL 111

Query: 123 MKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANILHANE 182
           +   AR                      G   + +  P    G  AY+ +K A  L A  
Sbjct: 112 LAAGAR------------------LVFLGAYPELVMLP----GLSAYAAAKAA--LEAYV 147

Query: 183 LARRLKEDGVDITANSVHPGAIAT 206
              R +  G+ +T   V P A+ T
Sbjct: 148 EVARKEVRGLRLTL--VRPPAVDT 169

Tthb094 from Thermus Thermophilus is a classical SDR which binds NADP. Members of this subgroup contain the YXXXK active site characteristic of SDRs. Also, an upstream Asn residue of the canonical catalytic tetrad is partially conserved in this subgroup of proteins of undetermined function. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 206

>gnl|CDD|214833 smart00822, PKS_KR, This enzymatic domain is part of bacterial polyketide synthases

 Score = 39.0 bits (92), Expect = 7e-04
 Identities = 21/88 (23%), Positives = 35/88 (39%), Gaps = 2/88 (2%)

Query: 4  VITGATSGIGTETARVLALRGV-HVV-MGVRDIAAGKDVKETIVKEIPSAKVDAMELDLS 61
          +ITG   G+G   AR LA RG   +V +      A          E   A+V  +  D++
Sbjct: 4  LITGGLGGLGRALARWLAERGARRLVLLSRSGPDAPGAAALLAELEAAGARVTVVACDVA 63

Query: 62 SLASVRNFASEYNIQHHQLNILINNAGI 89
             ++    +        L  +I+ AG+
Sbjct: 64 DRDALAAVLAAIPAVEGPLTGVIHAAGV 91

It catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. Length = 180

>gnl|CDD|166421 PLN02780, PLN02780, ketoreductase/ oxidoreductase

 Score = 39.1 bits (91), Expect = 0.001
 Identities = 39/151 (25%), Positives = 65/151 (43%), Gaps = 27/151 (17%)

Query: 4   VITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSL 63
           ++TG T GIG   A  LA +G+++V+  R+    KDV ++I  +    ++  + +D S  
Sbjct: 57  LVTGPTDGIGKGFAFQLARKGLNLVLVARNPDKLKDVSDSIQSKYSKTQIKTVVVDFSGD 116

Query: 64  ASVRNFASEYNIQHHQLNILINNAGIMGTPFM-------------LSKDNIELQFATNHL 110
                   +  I+   + +LINN G +  P+              L K N+E    T  +
Sbjct: 117 IDEGVKRIKETIEGLDVGVLINNVG-VSYPYARFFHEVDEELLKNLIKVNVE---GTTKV 172

Query: 111 GHFLLTNLLLDTMKKTARKSGGEGRIINVSS 141
              +L  +L        RK G    IIN+ S
Sbjct: 173 TQAVLPGML-------KRKKGA---IINIGS 193

Length = 320

>gnl|CDD|235933 PRK07097, PRK07097, gluconate 5-dehydrogenase; Provisional

 Score = 38.9 bits (91), Expect = 0.001
 Identities = 36/141 (25%), Positives = 66/141 (46%), Gaps = 13/141 (9%)

Query: 5   ITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDA--MELDLSS 62
           ITGA+ GIG   A+  A  G  +V    DI   +++ +  +       ++A     D++ 
Sbjct: 15  ITGASYGIGFAIAKAYAKAGATIV--FNDIN--QELVDKGLAAYRELGIEAHGYVCDVTD 70

Query: 63  LASVRNFASEYNIQHHQLNILINNAGIMGTPFML--SKDNIELQFATNHLGHFLLTNLLL 120
              V+   S+   +   ++IL+NNAGI+    ML  S ++       +    F+++  ++
Sbjct: 71  EDGVQAMVSQIEKEVGVIDILVNNAGIIKRIPMLEMSAEDFRQVIDIDLNAPFIVSKAVI 130

Query: 121 DTMKKTARKSGGEGRIINVSS 141
            +M K      G G+IIN+ S
Sbjct: 131 PSMIKK-----GHGKIINICS 146

Length = 265

>gnl|CDD|187578 cd05269, TMR_SDR_a, triphenylmethane reductase (TMR)-like proteins, NMRa-like, atypical (a) SDRs

 Score = 38.8 bits (91), Expect = 0.002
 Identities = 14/52 (26%), Positives = 22/52 (42%), Gaps = 3/52 (5%)

Query: 3  IVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVD 54
          I++TGAT  +GT    +L  +   VV  VR+    K         +   + D
Sbjct: 1  ILVTGATGKLGTAVVELLLAKVASVVALVRNPEKAKAFAA---DGVEVRQGD 49

TMR is an atypical NADP-binding protein of the SDR family. It lacks the active site residues of the SDRs but has a glycine rich NAD(P)-binding motif that matches the extended SDRs. Proteins in this subgroup however, are more similar in length to the classical SDRs. TMR was identified as a reducer of triphenylmethane dyes, important environmental pollutants. This subgroup also includes Escherichia coli NADPH-dependent quinine oxidoreductase (QOR2), which catalyzes two-electron reduction of quinone; but is unlikely to play a major role in protecting against quinone cytotoxicity. Atypical SDRs are distinct from classical SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 272

>gnl|CDD|187664 cd09763, DHRS1-like_SDR_c, human dehydrogenase/reductase (SDR family) member 1 (DHRS1) -like, classical (c) SDRs

 Score = 38.6 bits (90), Expect = 0.002
 Identities = 52/221 (23%), Positives = 78/221 (35%), Gaps = 44/221 (19%)

Query: 4   VITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPS--AKVDAMELDLS 61
           ++TGA+ GIG   A  L   G  V +  R I           +EI +   K   +  D S
Sbjct: 7   LVTGASRGIGRGIALQLGEAGATVYITGRTI---LPQLPGTAEEIEARGGKCIPVRCDHS 63

Query: 62  SLASVRNF----ASEYNIQHHQLNILINNA-----GIMGTP----FMLSKDNIELQFATN 108
               V       A E   Q  +L+IL+NNA      I+       +       +      
Sbjct: 64  DDDEVEALFERVARE---QQGRLDILVNNAYAAVQLILVGVAKPFWEEPPTIWDDINNVG 120

Query: 109 HLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRA 168
              H+  +      M K      G+G I+ +SS G  L Y   +               A
Sbjct: 121 LRAHYACSVYAAPLMVKA-----GKGLIVIISSTGG-LEYLFNV---------------A 159

Query: 169 YSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNII 209
           Y   K A    A ++A  LK  G  +   S+ PG + T ++
Sbjct: 160 YGVGKAAIDRMAADMAHELKPHG--VAVVSLWPGFVRTELV 198

This subgroup includes human DHRS1 and related proteins. These are members of the classical SDR family, with a canonical Gly-rich NAD-binding motif and the typical YXXXK active site motif. However, the rest of the catalytic tetrad is not strongly conserved. DHRS1 mRNA has been detected in many tissues, liver, heart, skeletal muscle, kidney and pancreas; a longer transcript is predominantly expressed in the liver , a shorter one in the heart. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 265

>gnl|CDD|178263 PLN02657, PLN02657, 3,8-divinyl protochlorophyllide a 8-vinyl reductase

 Score = 38.6 bits (90), Expect = 0.002
 Identities = 24/67 (35%), Positives = 37/67 (55%), Gaps = 4/67 (5%)

Query: 3   IVITGATSGIGTETARVLALRGVHVVMGVRDIAA--GKDVKETIVKEIPSAKVDAMELDL 60
           +++ GAT  IG    R L  RG +VV   R+ +   GK+ KE   KE+P A+V  +  D+
Sbjct: 63  VLVVGATGYIGKFVVRELVRRGYNVVAVAREKSGIRGKNGKEDTKKELPGAEV--VFGDV 120

Query: 61  SSLASVR 67
           +   S+R
Sbjct: 121 TDADSLR 127

Length = 390

>gnl|CDD|236116 PRK07856, PRK07856, short chain dehydrogenase; Provisional

 Score = 38.4 bits (90), Expect = 0.002
 Identities = 54/217 (24%), Positives = 85/217 (39%), Gaps = 56/217 (25%)

Query: 3   IVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSS 62
           +++TG T GIG   AR     G  VV+  R             + +     +    D+  
Sbjct: 9   VLVTGGTRGIGAGIARAFLAAGATVVVCGR----------RAPETVDGRPAEFHAADVRD 58

Query: 63  LASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDN--------IELQFATNHLGHFL 114
              V         +H +L++L+NNAG  G+P+ L+ +         +EL    N L   L
Sbjct: 59  PDQVAALVDAIVERHGRLDVLVNNAG--GSPYALAAEASPRFHEKIVEL----NLLAPLL 112

Query: 115 L---TNLLLDTMKKTARKSGGEGRIINVSSE-GHRLAYHEGIRFDKINDPSGYNGFRAYS 170
           +    N ++       ++ GG G I+N+ S  G R              PS   G  AY 
Sbjct: 113 VAQAANAVMQ------QQPGG-GSIVNIGSVSGRR--------------PS--PGTAAYG 149

Query: 171 QSKLANILHANELARRLK-EDGVDITANSVHPGAIAT 206
            +K A +L+   L R L  E    +  N+V  G + T
Sbjct: 150 AAK-AGLLN---LTRSLAVEWAPKVRVNAVVVGLVRT 182

Length = 252

>gnl|CDD|181077 PRK07677, PRK07677, short chain dehydrogenase; Provisional

 Score = 38.1 bits (89), Expect = 0.002
 Identities = 23/85 (27%), Positives = 45/85 (52%), Gaps = 2/85 (2%)

Query: 3  IVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSS 62
          ++ITG +SG+G   A+  A  G +VV+  R     ++ K  I  E    +V  +++D+ +
Sbjct: 4  VIITGGSSGMGKAMAKRFAEEGANVVITGRTKEKLEEAKLEI--EQFPGQVLTVQMDVRN 61

Query: 63 LASVRNFASEYNIQHHQLNILINNA 87
             V+    + + +  +++ LINNA
Sbjct: 62 PEDVQKMVEQIDEKFGRIDALINNA 86

Length = 252

>gnl|CDD|235739 PRK06200, PRK06200, 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional

 Score = 38.0 bits (89), Expect = 0.002
 Identities = 50/214 (23%), Positives = 76/214 (35%), Gaps = 42/214 (19%)

Query: 3   IVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSS 62
            +ITG  SGIG          G  V   V + +A K    ++ +      V  +E D++S
Sbjct: 9   ALITGGGSGIGRALVERFLAEGARV--AVLERSAEK--LASLRQRFG-DHVLVVEGDVTS 63

Query: 63  LASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQ---------FATNHLGHF 113
            A  +    +      +L+  + NAGI    +  S  +I  +         F  N  G+ 
Sbjct: 64  YADNQRAVDQTVDAFGKLDCFVGNAGIWD--YNTSLVDIPAETLDTAFDEIFNVNVKGYL 121

Query: 114 LLTNLLLDTMKKTARKSGGEGRII-NVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQS 172
           L     L  +K +       G +I  +S+      Y           P G  G   Y+ S
Sbjct: 122 LGAKAALPALKAS------GGSMIFTLSNSSF---Y-----------PGG--GGPLYTAS 159

Query: 173 KLANILHANELARRLKEDGVDITANSVHPGAIAT 206
           K A +    +LA  L      I  N V PG   T
Sbjct: 160 KHAVVGLVRQLAYEL---APKIRVNGVAPGGTVT 190

Length = 263

>gnl|CDD|181225 PRK08085, PRK08085, gluconate 5-dehydrogenase; Provisional

 Score = 37.8 bits (88), Expect = 0.002
 Identities = 42/145 (28%), Positives = 64/145 (44%), Gaps = 17/145 (11%)

Query: 3   IVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPS--AKVDAMELDL 60
           I+ITG+  GIG   A  LA  G  ++  + DI A +   E  V ++     K  A   ++
Sbjct: 12  ILITGSAQGIGFLLATGLAEYGAEII--INDITAER--AELAVAKLRQEGIKAHAAPFNV 67

Query: 61  SSLASVRNFASEYNIQHH--QLNILINNAGIMGT-PFM-LSKDNIELQFATNHLGHFLLT 116
           +    V   A E+ I+     +++LINNAGI    PF    +       A N    FL++
Sbjct: 68  THKQEV-EAAIEH-IEKDIGPIDVLINNAGIQRRHPFTEFPEQEWNDVIAVNQTAVFLVS 125

Query: 117 NLLLDTMKKTARKSGGEGRIINVSS 141
             +   M K        G+IIN+ S
Sbjct: 126 QAVARYMVKRQA-----GKIINICS 145

Length = 254

>gnl|CDD|183797 PRK12859, PRK12859, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 37.8 bits (88), Expect = 0.003
 Identities = 55/216 (25%), Positives = 89/216 (41%), Gaps = 35/216 (16%)

Query: 4   VITGAT--SGIGTETARVLALRGVHVVMGV-----RDIAAGKDVKETIV--KEIPS--AK 52
           V+TG +   GIG    + LA  G  +         +++  G D  E I   +E+     K
Sbjct: 10  VVTGVSRLDGIGAAICKELAEAGADIFFTYWTAYDKEMPWGVDQDEQIQLQEELLKNGVK 69

Query: 53  VDAMELDLSSLASVRNFASEYNIQHHQLNILINNAGI-MGTPF-MLSKDNIELQFATNHL 110
           V +MELDL+   + +   ++   Q    +IL+NNA       F  L+ + ++  +  N  
Sbjct: 70  VSSMELDLTQNDAPKELLNKVTEQLGYPHILVNNAAYSTNNDFSNLTAEELDKHYMVNVR 129

Query: 111 GHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYS 170
              LL+       +   +KSG  GRIIN++S                       G  AY+
Sbjct: 130 ATTLLS---SQFARGFDKKSG--GRIINMTSG---------------QFQGPMVGELAYA 169

Query: 171 QSKLANILHANELARRLKEDGVDITANSVHPGAIAT 206
            +K A     + LA  +   G  IT N+++PG   T
Sbjct: 170 ATKGAIDALTSSLAAEVAHLG--ITVNAINPGPTDT 203

Length = 256

>gnl|CDD|223774 COG0702, COG0702, Predicted nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

 Score = 38.0 bits (88), Expect = 0.003
 Identities = 15/39 (38%), Positives = 19/39 (48%)

Query: 1  MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKD 39
          M I++TGAT  +G    R L  RG  V   VR+  A   
Sbjct: 1  MKILVTGATGFVGGAVVRELLARGHEVRAAVRNPEAAAA 39

Length = 275

>gnl|CDD|187582 cd05274, KR_FAS_SDR_x, ketoreductase (KR) and fatty acid synthase (FAS), complex (x) SDRs

 Score = 37.7 bits (88), Expect = 0.004
 Identities = 20/71 (28%), Positives = 33/71 (46%), Gaps = 1/71 (1%)

Query: 4   VITGATSGIGTETARVLALRGV-HVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSS 62
           +ITG   G+G   AR LA RG  H+V+  R   A +      +     A+V  +  D++ 
Sbjct: 154 LITGGLGGLGLLVARWLAARGARHLVLLSRRGPAPRAAARAALLRAGGARVSVVRCDVTD 213

Query: 63  LASVRNFASEY 73
            A++    +E 
Sbjct: 214 PAALAALLAEL 224

Ketoreductase, a module of the multidomain polyketide synthase (PKS), has 2 subdomains, each corresponding to a SDR family monomer. The C-terminal subdomain catalyzes the NADPH-dependent reduction of the beta-carbonyl of a polyketide to a hydroxyl group, a step in the biosynthesis of polyketides, such as erythromycin. The N-terminal subdomain, an interdomain linker, is a truncated Rossmann fold which acts to stabilizes the catalytic subdomain. Unlike typical SDRs, the isolated domain does not oligomerize but is composed of 2 subdomains, each resembling an SDR monomer. The active site resembles that of typical SDRs, except that the usual positions of the catalytic Asn and Tyr are swapped, so that the canonical YXXXK motif changes to YXXXN. Modular PKSs are multifunctional structures in which the makeup recapitulates that found in (and may have evolved from) FAS. In some instances, such as porcine FAS, an enoyl reductase (ER) module is inserted between the sub-domains. Fatty acid synthesis occurs via the stepwise elongation of a chain (which is attached to acyl carrier protein, ACP) with 2-carbon units. Eukaryotic systems consist of large, multifunctional synthases (type I) while bacterial, type II systems, use single function proteins. Fungal fatty acid synthase uses a dodecamer of 6 alpha and 6 beta subunits. In mammalian type FAS cycles, ketoacyl synthase forms acetoacetyl-ACP which is reduced by the NADP-dependent beta-KR, forming beta-hydroxyacyl-ACP, which is in turn dehydrated by dehydratase to a beta-enoyl intermediate, which is reduced by NADP-dependent beta-ER. Polyketide synthesis also proceeds via the addition of 2-carbon units as in fatty acid synthesis. The complex SDR NADP-binding motif, GGXGXXG, is often present, but is not strictly conserved in each instance of the module. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type KRs have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 375

>gnl|CDD|187539 cd05228, AR_FR_like_1_SDR_e, uncharacterized subgroup of aldehyde reductase and flavonoid reductase related proteins, extended (e) SDRs

 Score = 37.3 bits (87), Expect = 0.004
 Identities = 46/202 (22%), Positives = 76/202 (37%), Gaps = 35/202 (17%)

Query: 3   IVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSS 62
           I++TGAT  +G+   R L  +G  V   VR  +            +    V+ +E DL+ 
Sbjct: 1   ILVTGATGFLGSNLVRALLAQGYRVRALVRSGSD--------AVLLDGLPVEVVEGDLTD 52

Query: 63  LASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDT 122
            AS+       +   H          +     + +KD  EL + TN  G     N+L   
Sbjct: 53  AASLAAAMKGCDRVFH----------LAAFTSLWAKDRKEL-YRTNVEG---TRNVL--- 95

Query: 123 MKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANILHANE 182
               A ++G   R+++ SS    L      R D+    +       Y +SKL     A  
Sbjct: 96  --DAALEAGVR-RVVHTSSIA-ALGGPPDGRIDETTPWNERPFPNDYYRSKLL----AEL 147

Query: 183 LARRLKEDGVDITANSVHPGAI 204
                  +G+D+    V+P A+
Sbjct: 148 EVLEAAAEGLDVV--IVNPSAV 167

This subgroup contains proteins of unknown function related to aldehyde reductase and flavonoid reductase of the extended SDR-type. Aldehyde reductase I (aka carbonyl reductase) is an NADP-binding SDR; it has an NADP-binding motif consensus that is slightly different from the canonical SDR form and lacks the Asn of the extended SDR active site tetrad. Aldehyde reductase I catalyzes the NADP-dependent reduction of ethyl 4-chloro-3-oxobutanoate to ethyl (R)-4-chloro-3-hydroxybutanoate. The related flavonoid reductases act in the NADP-dependent reduction of flavonoids, ketone-containing plant secondary metabolites. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 318

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	251
COG0300	265	DltE Short-chain dehydrogenases of various substra	100.0
KOG1205	282	consensus Predicted dehydrogenase [Secondary metab	100.0
COG4221	246	Short-chain alcohol dehydrogenase of unknown speci	100.0
KOG1200	256	consensus Mitochondrial/plastidial beta-ketoacyl-A	100.0
KOG1201	300	consensus Hydroxysteroid 17-beta dehydrogenase 11	100.0
PRK08339	263	short chain dehydrogenase; Provisional	100.0
PRK08415	274	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK06079	252	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK07063	260	short chain dehydrogenase; Provisional	100.0
PRK06505	271	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK07062	265	short chain dehydrogenase; Provisional	100.0
PRK08690	261	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK07478	254	short chain dehydrogenase; Provisional	100.0
PRK12481	251	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	100.0
PRK05854	313	short chain dehydrogenase; Provisional	100.0
PRK08594	257	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK06603	260	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK08589	272	short chain dehydrogenase; Validated	100.0
PRK07370	258	enoyl-(acyl carrier protein) reductase; Validated	100.0
PRK07533	258	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
KOG0725	270	consensus Reductases with broad range of substrate	100.0
PRK08159	272	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK05599	246	hypothetical protein; Provisional	100.0
PRK05867	253	short chain dehydrogenase; Provisional	100.0
KOG1208	314	consensus Dehydrogenases with different specificit	100.0
PRK08416	260	7-alpha-hydroxysteroid dehydrogenase; Provisional	100.0
PRK08303	305	short chain dehydrogenase; Provisional	100.0
PRK06139	330	short chain dehydrogenase; Provisional	100.0
PRK07984	262	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK06997	260	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK05876	275	short chain dehydrogenase; Provisional	100.0
PRK07791	286	short chain dehydrogenase; Provisional	100.0
PRK08862	227	short chain dehydrogenase; Provisional	100.0
PRK06197	306	short chain dehydrogenase; Provisional	100.0
PLN02730	303	enoyl-[acyl-carrier-protein] reductase	100.0
PRK07889	256	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK06114	254	short chain dehydrogenase; Provisional	100.0
KOG1610	322	consensus Corticosteroid 11-beta-dehydrogenase and	100.0
PRK08340	259	glucose-1-dehydrogenase; Provisional	100.0
PRK05872	296	short chain dehydrogenase; Provisional	100.0
PRK07831	262	short chain dehydrogenase; Provisional	100.0
PRK08265	261	short chain dehydrogenase; Provisional	100.0
TIGR01500	256	sepiapter_red sepiapterin reductase. This model de	100.0
PRK08085	254	gluconate 5-dehydrogenase; Provisional	100.0
PRK12747	252	short chain dehydrogenase; Provisional	100.0
PRK07035	252	short chain dehydrogenase; Provisional	100.0
KOG4169	261	consensus 15-hydroxyprostaglandin dehydrogenase an	100.0
PRK08993	253	2-deoxy-D-gluconate 3-dehydrogenase; Validated	100.0
PLN02780	320	ketoreductase/ oxidoreductase	100.0
PRK06196	315	oxidoreductase; Provisional	100.0
PRK06172	253	short chain dehydrogenase; Provisional	100.0
PRK08643	256	acetoin reductase; Validated	100.0
PRK06398	258	aldose dehydrogenase; Validated	100.0
PRK06463	255	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK07109	334	short chain dehydrogenase; Provisional	100.0
PRK08277	278	D-mannonate oxidoreductase; Provisional	100.0
COG3967	245	DltE Short-chain dehydrogenase involved in D-alani	100.0
PRK06113	255	7-alpha-hydroxysteroid dehydrogenase; Validated	100.0
PRK06935	258	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	100.0
PRK07097	265	gluconate 5-dehydrogenase; Provisional	100.0
PRK09242	257	tropinone reductase; Provisional	100.0
PRK07985	294	oxidoreductase; Provisional	100.0
PLN02253	280	xanthoxin dehydrogenase	100.0
PRK06200	263	2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrog	100.0
PRK07825	273	short chain dehydrogenase; Provisional	100.0
PRK05866	293	short chain dehydrogenase; Provisional	100.0
PRK12859	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	100.0
PRK06128	300	oxidoreductase; Provisional	100.0
PRK07024	257	short chain dehydrogenase; Provisional	100.0
PRK07677	252	short chain dehydrogenase; Provisional	100.0
PRK06484	520	short chain dehydrogenase; Validated	100.0
PRK05650	270	short chain dehydrogenase; Provisional	100.0
PRK08936	261	glucose-1-dehydrogenase; Provisional	100.0
TIGR03325	262	BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydro	100.0
PRK05855	582	short chain dehydrogenase; Validated	100.0
PRK05993	277	short chain dehydrogenase; Provisional	100.0
TIGR01832	248	kduD 2-deoxy-D-gluconate 3-dehydrogenase. This mod	100.0
PRK07523	255	gluconate 5-dehydrogenase; Provisional	100.0
PRK06194	287	hypothetical protein; Provisional	100.0
PRK12743	256	oxidoreductase; Provisional	100.0
PRK12823	260	benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylat	100.0
PRK07904	253	short chain dehydrogenase; Provisional	100.0
PRK06182	273	short chain dehydrogenase; Validated	100.0
PRK07067	257	sorbitol dehydrogenase; Provisional	100.0
PRK08642	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK07069	251	short chain dehydrogenase; Validated	100.0
PF13561	241	adh_short_C2: Enoyl-(Acyl carrier protein) reducta	100.0
PRK08278	273	short chain dehydrogenase; Provisional	100.0
PRK05717	255	oxidoreductase; Validated	100.0
PRK07832	272	short chain dehydrogenase; Provisional	100.0
TIGR01289	314	LPOR light-dependent protochlorophyllide reductase	100.0
PRK06841	255	short chain dehydrogenase; Provisional	100.0
PRK08251	248	short chain dehydrogenase; Provisional	100.0
PRK07454	241	short chain dehydrogenase; Provisional	100.0
PRK06125	259	short chain dehydrogenase; Provisional	100.0
PRK06124	256	gluconate 5-dehydrogenase; Provisional	100.0
PLN00015	308	protochlorophyllide reductase	100.0
PRK07792	306	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK06483	236	dihydromonapterin reductase; Provisional	100.0
PRK06484	520	short chain dehydrogenase; Validated	100.0
PRK12384	259	sorbitol-6-phosphate dehydrogenase; Provisional	100.0
PRK06180	277	short chain dehydrogenase; Provisional	100.0
PRK06940	275	short chain dehydrogenase; Provisional	100.0
PRK07890	258	short chain dehydrogenase; Provisional	100.0
PRK08226	263	short chain dehydrogenase; Provisional	100.0
PRK08263	275	short chain dehydrogenase; Provisional	100.0
PRK08267	260	short chain dehydrogenase; Provisional	100.0
PRK06523	260	short chain dehydrogenase; Provisional	100.0
PRK06179	270	short chain dehydrogenase; Provisional	100.0
TIGR02415	254	23BDH acetoin reductases. One member of this famil	100.0
PRK06300	299	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK10538	248	malonic semialdehyde reductase; Provisional	100.0
KOG1209	289	consensus 1-Acyl dihydroxyacetone phosphate reduct	100.0
PRK08063	250	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK07814	263	short chain dehydrogenase; Provisional	100.0
PRK05693	274	short chain dehydrogenase; Provisional	100.0
PRK12938	246	acetyacetyl-CoA reductase; Provisional	100.0
PRK06949	258	short chain dehydrogenase; Provisional	100.0
PRK06500	249	short chain dehydrogenase; Provisional	100.0
PRK08628	258	short chain dehydrogenase; Provisional	100.0
PRK12937	245	short chain dehydrogenase; Provisional	100.0
PRK09186	256	flagellin modification protein A; Provisional	100.0
PRK06171	266	sorbitol-6-phosphate 2-dehydrogenase; Provisional	100.0
PRK12939	250	short chain dehydrogenase; Provisional	100.0
PRK06947	248	glucose-1-dehydrogenase; Provisional	100.0
PRK07774	250	short chain dehydrogenase; Provisional	100.0
PRK08703	239	short chain dehydrogenase; Provisional	100.0
PRK07576	264	short chain dehydrogenase; Provisional	100.0
PRK07856	252	short chain dehydrogenase; Provisional	100.0
PRK06701	290	short chain dehydrogenase; Provisional	100.0
PRK06914	280	short chain dehydrogenase; Provisional	100.0
PRK06482	276	short chain dehydrogenase; Provisional	100.0
PRK06123	248	short chain dehydrogenase; Provisional	100.0
TIGR01831	239	fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductas	100.0
PRK07453	322	protochlorophyllide oxidoreductase; Validated	100.0
TIGR02685	267	pter_reduc_Leis pteridine reductase. Pteridine red	100.0
PRK07666	239	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK05884	223	short chain dehydrogenase; Provisional	100.0
PRK07231	251	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK12744	257	short chain dehydrogenase; Provisional	100.0
PRK12748	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	100.0
PRK06138	252	short chain dehydrogenase; Provisional	99.98
KOG1014	312	consensus 17 beta-hydroxysteroid dehydrogenase typ	99.98
PRK12935	247	acetoacetyl-CoA reductase; Provisional	99.98
PRK07102	243	short chain dehydrogenase; Provisional	99.98
PRK13394	262	3-hydroxybutyrate dehydrogenase; Provisional	99.98
PRK05875	276	short chain dehydrogenase; Provisional	99.98
PRK09072	263	short chain dehydrogenase; Provisional	99.98
PRK12936	245	3-ketoacyl-(acyl-carrier-protein) reductase NodG;	99.98
TIGR03206	250	benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydr	99.98
PRK06057	255	short chain dehydrogenase; Provisional	99.98
PRK06101	240	short chain dehydrogenase; Provisional	99.97
KOG1210	331	consensus Predicted 3-ketosphinganine reductase [S	99.97
PRK12429	258	3-hydroxybutyrate dehydrogenase; Provisional	99.97
KOG1207	245	consensus Diacetyl reductase/L-xylulose reductase	99.97
PRK08213	259	gluconate 5-dehydrogenase; Provisional	99.97
PRK12824	245	acetoacetyl-CoA reductase; Provisional	99.97
KOG1611	249	consensus Predicted short chain-type dehydrogenase	99.97
PRK12745	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	99.97
PF00106	167	adh_short: short chain dehydrogenase alcohol dehyd	99.97
PRK07775	274	short chain dehydrogenase; Provisional	99.97
PRK07201	657	short chain dehydrogenase; Provisional	99.97
TIGR01829	242	AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hy	99.97
COG1028	251	FabG Dehydrogenases with different specificities (	99.97
PRK06198	260	short chain dehydrogenase; Provisional	99.97
PRK12742	237	oxidoreductase; Provisional	99.97
PRK09134	258	short chain dehydrogenase; Provisional	99.97
PRK08220	252	2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated	99.97
PRK08217	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.97
PRK12746	254	short chain dehydrogenase; Provisional	99.97
PRK06181	263	short chain dehydrogenase; Provisional	99.97
PRK09730	247	putative NAD(P)-binding oxidoreductase; Provisiona	99.97
PRK08945	247	putative oxoacyl-(acyl carrier protein) reductase;	99.97
PRK06924	251	short chain dehydrogenase; Provisional	99.97
PRK07578	199	short chain dehydrogenase; Provisional	99.97
PRK08177	225	short chain dehydrogenase; Provisional	99.97
PRK12827	249	short chain dehydrogenase; Provisional	99.97
PRK07074	257	short chain dehydrogenase; Provisional	99.97
TIGR02632	676	RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alc	99.97
PRK06550	235	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.97
PRK12826	251	3-ketoacyl-(acyl-carrier-protein) reductase; Revie	99.97
PRK05565	247	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.97
PRK06077	252	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.97
PRK07326	237	short chain dehydrogenase; Provisional	99.97
PRK09009	235	C factor cell-cell signaling protein; Provisional	99.97
PRK07577	234	short chain dehydrogenase; Provisional	99.97
PRK07023	243	short chain dehydrogenase; Provisional	99.97
KOG1199	260	consensus Short-chain alcohol dehydrogenase/3-hydr	99.97
PRK09291	257	short chain dehydrogenase; Provisional	99.97
TIGR01963	255	PHB_DH 3-hydroxybutyrate dehydrogenase. This model	99.96
PRK05557	248	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.96
PRK08261	450	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.96
PRK05653	246	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.96
PRK12828	239	short chain dehydrogenase; Provisional	99.96
PRK12825	249	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.96
PRK09135	249	pteridine reductase; Provisional	99.96
PRK12829	264	short chain dehydrogenase; Provisional	99.96
PRK07060	245	short chain dehydrogenase; Provisional	99.96
PRK08264	238	short chain dehydrogenase; Validated	99.96
PRK07041	230	short chain dehydrogenase; Provisional	99.96
PRK08324	681	short chain dehydrogenase; Validated	99.96
PRK07806	248	short chain dehydrogenase; Provisional	99.96
TIGR01830	239	3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) re	99.96
PRK05786	238	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.96
PRK08017	256	oxidoreductase; Provisional	99.96
PRK06953	222	short chain dehydrogenase; Provisional	99.95
PRK12367	245	short chain dehydrogenase; Provisional	99.95
KOG1478	341	consensus 3-keto sterol reductase [Lipid transport	99.95
KOG1204	253	consensus Predicted dehydrogenase [Secondary metab	99.94
PRK08219	227	short chain dehydrogenase; Provisional	99.93
TIGR02813	2582	omega_3_PfaA polyketide-type polyunsaturated fatty	99.93
COG0623	259	FabI Enoyl-[acyl-carrier-protein]	99.93
PRK12428	241	3-alpha-hydroxysteroid dehydrogenase; Provisional	99.92
PRK07424	406	bifunctional sterol desaturase/short chain dehydro	99.91
smart00822	180	PKS_KR This enzymatic domain is part of bacterial	99.91
TIGR03589	324	PseB UDP-N-acetylglucosamine 4,6-dehydratase. This	99.88
PF08659	181	KR: KR domain; InterPro: IPR013968 This domain is	99.88
TIGR02622	349	CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Member	99.87
PLN02989	325	cinnamyl-alcohol dehydrogenase family protein	99.87
PRK13656	398	trans-2-enoyl-CoA reductase; Provisional	99.87
PLN03209	576	translocon at the inner envelope of chloroplast su	99.85
KOG1502	327	consensus Flavonol reductase/cinnamoyl-CoA reducta	99.83
PLN02986	322	cinnamyl-alcohol dehydrogenase family protein	99.83
PLN02650	351	dihydroflavonol-4-reductase	99.83
COG1088	340	RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope	99.82
PRK06720	169	hypothetical protein; Provisional	99.82
PLN02583	297	cinnamoyl-CoA reductase	99.82
PLN02896	353	cinnamyl-alcohol dehydrogenase	99.82
PLN02214	342	cinnamoyl-CoA reductase	99.81
PRK10217	355	dTDP-glucose 4,6-dehydratase; Provisional	99.81
PLN02653	340	GDP-mannose 4,6-dehydratase	99.8
TIGR01472	343	gmd GDP-mannose 4,6-dehydratase. Excluded from thi	99.8
PLN02572	442	UDP-sulfoquinovose synthase	99.8
PLN00198	338	anthocyanidin reductase; Provisional	99.8
PLN02662	322	cinnamyl-alcohol dehydrogenase family protein	99.79
TIGR01181	317	dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase. This	99.77
PF01073	280	3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/iso	99.77
COG1087	329	GalE UDP-glucose 4-epimerase [Cell envelope biogen	99.77
PLN02240	352	UDP-glucose 4-epimerase	99.76
TIGR03466	328	HpnA hopanoid-associated sugar epimerase. The sequ	99.76
PRK10084	352	dTDP-glucose 4,6 dehydratase; Provisional	99.76
PRK10675	338	UDP-galactose-4-epimerase; Provisional	99.76
PRK15181	348	Vi polysaccharide biosynthesis protein TviC; Provi	99.76
PF02719	293	Polysacc_synt_2: Polysaccharide biosynthesis prote	99.74
COG1086	588	Predicted nucleoside-diphosphate sugar epimerases	99.73
PF01370	236	Epimerase: NAD dependent epimerase/dehydratase fam	99.73
PLN02686	367	cinnamoyl-CoA reductase	99.72
TIGR01179	328	galE UDP-glucose-4-epimerase. This enzyme intercon	99.71
PLN00141	251	Tic62-NAD(P)-related group II protein; Provisional	99.68
PLN02427	386	UDP-apiose/xylose synthase	99.68
PRK11908	347	NAD-dependent epimerase/dehydratase family protein	99.67
COG0451	314	WcaG Nucleoside-diphosphate-sugar epimerases [Cell	99.66
PRK08125	660	bifunctional UDP-glucuronic acid decarboxylase/UDP	99.65
PLN02695	370	GDP-D-mannose-3',5'-epimerase	99.65
PRK11150	308	rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Pro	99.64
TIGR01746	367	Thioester-redct thioester reductase domain. It has	99.64
PLN02260	668	probable rhamnose biosynthetic enzyme	99.63
PRK09987	299	dTDP-4-dehydrorhamnose reductase; Provisional	99.62
TIGR01214	287	rmlD dTDP-4-dehydrorhamnose reductase. This enzyme	99.61
KOG1371	343	consensus UDP-glucose 4-epimerase/UDP-sulfoquinovo	99.61
PLN02657	390	3,8-divinyl protochlorophyllide a 8-vinyl reductas	99.6
TIGR02197	314	heptose_epim ADP-L-glycero-D-manno-heptose-6-epime	99.59
PLN02206	442	UDP-glucuronate decarboxylase	99.57
PLN02166	436	dTDP-glucose 4,6-dehydratase	99.56
PLN02725	306	GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductas	99.54
CHL00194	317	ycf39 Ycf39; Provisional	99.53
PF04321	286	RmlD_sub_bind: RmlD substrate binding domain; Inte	99.52
PRK07201	657	short chain dehydrogenase; Provisional	99.52
PF07993	249	NAD_binding_4: Male sterility protein; InterPro: I	99.48
KOG1430	361	consensus C-3 sterol dehydrogenase/3-beta-hydroxys	99.46
PLN02778	298	3,5-epimerase/4-reductase	99.45
PLN02996	491	fatty acyl-CoA reductase	99.43
COG1091	281	RfbD dTDP-4-dehydrorhamnose reductase [Cell envelo	99.41
PF13460	183	NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X	99.41
PRK05865	854	hypothetical protein; Provisional	99.4
KOG4022	236	consensus Dihydropteridine reductase DHPR/QDPR [Am	99.36
PF08643	299	DUF1776: Fungal family of unknown function (DUF177	99.36
PLN02260	668	probable rhamnose biosynthetic enzyme	99.33
TIGR01777	292	yfcH conserved hypothetical protein TIGR01777. Thi	99.33
COG3320	382	Putative dehydrogenase domain of multifunctional n	99.32
KOG0747	331	consensus Putative NAD+-dependent epimerases [Carb	99.23
TIGR02114	227	coaB_strep phosphopantothenate--cysteine ligase, s	99.22
PLN02503	605	fatty acyl-CoA reductase 2	99.21
PRK08309	177	short chain dehydrogenase; Provisional	99.2
TIGR03443	1389	alpha_am_amid L-aminoadipate-semialdehyde dehydrog	99.15
COG1089	345	Gmd GDP-D-mannose dehydratase [Cell envelope bioge	99.11
TIGR03649	285	ergot_EASG ergot alkaloid biosynthesis protein, AF	99.05
PLN00016	378	RNA-binding protein; Provisional	99.03
PRK12320	699	hypothetical protein; Provisional	99.01
KOG1429	350	consensus dTDP-glucose 4-6-dehydratase/UDP-glucuro	98.95
COG1090	297	Predicted nucleoside-diphosphate sugar epimerase [	98.75
PRK06732	229	phosphopantothenate--cysteine ligase; Validated	98.74
PRK05579	399	bifunctional phosphopantothenoylcysteine decarboxy	98.74
PF05368	233	NmrA: NmrA-like family; InterPro: IPR008030 NmrA i	98.71
PRK08261	450	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	98.7
PRK12548	289	shikimate 5-dehydrogenase; Provisional	98.67
KOG1202	2376	consensus Animal-type fatty acid synthase and rela	98.61
cd01078	194	NAD_bind_H4MPT_DH NADP binding domain of methylene	98.58
KOG1221	467	consensus Acyl-CoA reductase [Lipid transport and	98.58
COG4982	866	3-oxoacyl-[acyl-carrier protein]	98.54
COG1748	389	LYS9 Saccharopine dehydrogenase and related protei	98.49
TIGR00521	390	coaBC_dfp phosphopantothenoylcysteine decarboxylas	98.48
COG0702	275	Predicted nucleoside-diphosphate-sugar epimerases	98.47
KOG1431	315	consensus GDP-L-fucose synthetase [Carbohydrate tr	98.43
COG2910	211	Putative NADH-flavin reductase [General function p	98.36
PLN00106	323	malate dehydrogenase	98.33
PF03435	386	Saccharop_dh: Saccharopine dehydrogenase ; InterPr	98.3
KOG1203	411	consensus Predicted dehydrogenase [Carbohydrate tr	98.28
KOG2733	423	consensus Uncharacterized membrane protein [Functi	98.27
KOG1372	376	consensus GDP-mannose 4,6 dehydratase [Carbohydrat	98.21
PTZ00325	321	malate dehydrogenase; Provisional	98.15
PF01488	135	Shikimate_DH: Shikimate / quinate 5-dehydrogenase;	98.08
PF00056	141	Ldh_1_N: lactate/malate dehydrogenase, NAD binding	98.07
PRK09620	229	hypothetical protein; Provisional	97.98
KOG2865	391	consensus NADH:ubiquinone oxidoreductase, NDUFA9/3	97.98
cd01336	325	MDH_cytoplasmic_cytosolic Cytoplasmic and cytosoli	97.9
PRK14982	340	acyl-ACP reductase; Provisional	97.82
KOG2774	366	consensus NAD dependent epimerase [General functio	97.8
PRK14106	450	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	97.8
KOG4039	238	consensus Serine/threonine kinase TIP30/CC3 [Signa	97.8
cd05291	306	HicDH_like L-2-hydroxyisocapronate dehydrogenases	97.76
PRK15116	268	sulfur acceptor protein CsdL; Provisional	97.69
cd00755	231	YgdL_like Family of activating enzymes (E1) of ubi	97.65
PRK12475	338	thiamine/molybdopterin biosynthesis MoeB-like prot	97.64
cd08253	325	zeta_crystallin Zeta-crystallin with NADP-dependen	97.63
COG3268	382	Uncharacterized conserved protein [Function unknow	97.6
cd01065	155	NAD_bind_Shikimate_DH NAD(P) binding domain of Shi	97.59
cd00704	323	MDH Malate dehydrogenase. Malate dehydrogenase (MD	97.58
TIGR00507	270	aroE shikimate 5-dehydrogenase. This model finds p	97.56
cd08266	342	Zn_ADH_like1 Alcohol dehydrogenases of the MDR fam	97.54
PRK05086	312	malate dehydrogenase; Provisional	97.53
PRK06849	389	hypothetical protein; Provisional	97.52
TIGR01758	324	MDH_euk_cyt malate dehydrogenase, NAD-dependent. T	97.48
TIGR00715	256	precor6x_red precorrin-6x reductase. This enzyme w	97.46
cd01338	322	MDH_choloroplast_like Chloroplast-like malate dehy	97.44
TIGR02356	202	adenyl_thiF thiazole biosynthesis adenylyltransfer	97.44
PF04127	185	DFP: DNA / pantothenate metabolism flavoprotein; I	97.43
PRK07688	339	thiamine/molybdopterin biosynthesis ThiF/MoeB-like	97.42
cd01487	174	E1_ThiF_like E1_ThiF_like. Member of superfamily o	97.41
cd05294	309	LDH-like_MDH_nadp A lactate dehydrogenases-like st	97.37
PRK00066	315	ldh L-lactate dehydrogenase; Reviewed	97.36
PRK05690	245	molybdopterin biosynthesis protein MoeB; Provision	97.36
PRK08762	376	molybdopterin biosynthesis protein MoeB; Validated	97.34
PF00899	135	ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-a	97.31
PRK08644	212	thiamine biosynthesis protein ThiF; Provisional	97.25
PRK05597	355	molybdopterin biosynthesis protein MoeB; Validated	97.25
cd01483	143	E1_enzyme_family Superfamily of activating enzymes	97.24
cd00757	228	ThiF_MoeB_HesA_family ThiF_MoeB_HesA. Family of E1	97.23
cd08295	338	double_bond_reductase_like Arabidopsis alkenal dou	97.2
PRK12549	284	shikimate 5-dehydrogenase; Reviewed	97.19
cd01337	310	MDH_glyoxysomal_mitochondrial Glyoxysomal and mito	97.18
PRK14027	283	quinate/shikimate dehydrogenase; Provisional	97.18
COG0604	326	Qor NADPH:quinone reductase and related Zn-depende	97.16
TIGR02813	2582	omega_3_PfaA polyketide-type polyunsaturated fatty	97.14
TIGR01915	219	npdG NADPH-dependent F420 reductase. This model re	97.14
cd05293	312	LDH_1 A subgroup of L-lactate dehydrogenases. L-la	97.13
cd01489	312	Uba2_SUMO Ubiquitin activating enzyme (E1) subunit	97.13
PLN03154	348	putative allyl alcohol dehydrogenase; Provisional	97.11
cd08293	345	PTGR2 Prostaglandin reductase. Prostaglandins and	97.1
PRK09496	453	trkA potassium transporter peripheral membrane com	97.07
PTZ00117	319	malate dehydrogenase; Provisional	97.06
TIGR02825	325	B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15	97.05
cd01484	234	E1-2_like Ubiquitin activating enzyme (E1), repeat	97.05
TIGR01809	282	Shik-DH-AROM shikimate-5-dehydrogenase, fungal ARO	97.05
PF12242	78	Eno-Rase_NADH_b: NAD(P)H binding domain of trans-2	97.04
PRK02472	447	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	97.04
TIGR02354	200	thiF_fam2 thiamine biosynthesis protein ThiF, fami	97.02
cd05276	323	p53_inducible_oxidoreductase PIG3 p53-inducible qu	97.01
cd05188	271	MDR Medium chain reductase/dehydrogenase (MDR)/zin	96.99
COG0039	313	Mdh Malate/lactate dehydrogenases [Energy producti	96.98
PRK00258	278	aroE shikimate 5-dehydrogenase; Reviewed	96.97
PRK13940	414	glutamyl-tRNA reductase; Provisional	96.97
KOG1198	347	consensus Zinc-binding oxidoreductase [Energy prod	96.97
PLN02602	350	lactate dehydrogenase	96.95
TIGR00518	370	alaDH alanine dehydrogenase. The family of known L	96.93
PLN02520	529	bifunctional 3-dehydroquinate dehydratase/shikimat	96.91
cd00300	300	LDH_like L-lactate dehydrogenase-like enzymes. Mem	96.91
cd00650	263	LDH_MDH_like NAD-dependent, lactate dehydrogenase-	96.91
TIGR01772	312	MDH_euk_gproteo malate dehydrogenase, NAD-dependen	96.9
cd05290	307	LDH_3 A subgroup of L-lactate dehydrogenases. L-la	96.88
cd01075	200	NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of l	96.86
cd08259	332	Zn_ADH5 Alcohol dehydrogenases of the MDR family.	96.85
TIGR02355	240	moeB molybdopterin synthase sulfurylase MoeB. This	96.83
PRK08223	287	hypothetical protein; Validated	96.82
PRK06223	307	malate dehydrogenase; Reviewed	96.82
cd01485	198	E1-1_like Ubiquitin activating enzyme (E1), repeat	96.8
PTZ00082	321	L-lactate dehydrogenase; Provisional	96.77
PLN00112	444	malate dehydrogenase (NADP); Provisional	96.77
cd01488	291	Uba3_RUB Ubiquitin activating enzyme (E1) subunit	96.75
PRK05600	370	thiamine biosynthesis protein ThiF; Validated	96.74
cd01492	197	Aos1_SUMO Ubiquitin activating enzyme (E1) subunit	96.72
PRK08328	231	hypothetical protein; Provisional	96.71
PRK08655	437	prephenate dehydrogenase; Provisional	96.71
KOG1197	336	consensus Predicted quinone oxidoreductase [Energy	96.7
PRK14968	188	putative methyltransferase; Provisional	96.69
PRK04148	134	hypothetical protein; Provisional	96.67
cd05292	308	LDH_2 A subgroup of L-lactate dehydrogenases. L-la	96.67
PF02254	116	TrkA_N: TrkA-N domain; InterPro: IPR003148 The reg	96.66
TIGR01759	323	MalateDH-SF1 malate dehydrogenase. This model repr	96.66
PLN02819	1042	lysine-ketoglutarate reductase/saccharopine dehydr	96.63
cd08294	329	leukotriene_B4_DH_like 13-PGR is a bifunctional en	96.63
COG0169	283	AroE Shikimate 5-dehydrogenase [Amino acid transpo	96.61
COG0569	225	TrkA K+ transport systems, NAD-binding component [	96.6
PRK09424	509	pntA NAD(P) transhydrogenase subunit alpha; Provis	96.56
PRK12749	288	quinate/shikimate dehydrogenase; Reviewed	96.55
PF01113	124	DapB_N: Dihydrodipicolinate reductase, N-terminus;	96.48
PRK09880	343	L-idonate 5-dehydrogenase; Provisional	96.47
TIGR01757	387	Malate-DH_plant malate dehydrogenase, NADP-depende	96.43
cd01486	307	Apg7 Apg7 is an E1-like protein, that activates tw	96.42
PRK00045	423	hemA glutamyl-tRNA reductase; Reviewed	96.41
TIGR02824	325	quinone_pig3 putative NAD(P)H quinone oxidoreducta	96.41
TIGR02853	287	spore_dpaA dipicolinic acid synthetase, A subunit.	96.4
cd05213	311	NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain	96.4
cd01339	300	LDH-like_MDH L-lactate dehydrogenase-like malate d	96.38
PRK07411	390	hypothetical protein; Validated	96.37
PF10727	127	Rossmann-like: Rossmann-like domain; InterPro: IPR	96.34
PRK14851	679	hypothetical protein; Provisional	96.33
COG1064	339	AdhP Zn-dependent alcohol dehydrogenases [General	96.31
cd05288	329	PGDH Prostaglandin dehydrogenases. Prostaglandins	96.3
PRK09496	453	trkA potassium transporter peripheral membrane com	96.29
PF03446	163	NAD_binding_2: NAD binding domain of 6-phosphogluc	96.25
cd08268	328	MDR2 Medium chain dehydrogenases/reductase (MDR)/z	96.23
TIGR01035	417	hemA glutamyl-tRNA reductase. This enzyme, togethe	96.22
PRK07878	392	molybdopterin biosynthesis-like protein MoeZ; Vali	96.18
PRK05442	326	malate dehydrogenase; Provisional	96.15
TIGR01771	299	L-LDH-NAD L-lactate dehydrogenase. This model repr	96.14
TIGR01763	305	MalateDH_bact malate dehydrogenase, NAD-dependent.	96.12
PRK07877	722	hypothetical protein; Provisional	96.11
PF02737	180	3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD bind	96.09
PLN00203	519	glutamyl-tRNA reductase	96.05
TIGR02818	368	adh_III_F_hyde S-(hydroxymethyl)glutathione dehydr	96.02
PRK09310	477	aroDE bifunctional 3-dehydroquinate dehydratase/sh	96.02
cd08244	324	MDR_enoyl_red Possible enoyl reductase. Member ide	96.0
COG2085	211	Predicted dinucleotide-binding enzymes [General fu	95.97
TIGR01381	664	E1_like_apg7 E1-like protein-activating enzyme Gsa	95.92
cd08239	339	THR_DH_like L-threonine dehydrogenase (TDH)-like.	95.92
PRK08306	296	dipicolinate synthase subunit A; Reviewed	95.87
PRK14852	989	hypothetical protein; Provisional	95.84
PRK08293	287	3-hydroxybutyryl-CoA dehydrogenase; Validated	95.82
cd08289	326	MDR_yhfp_like Yhfp putative quinone oxidoreductase	95.8
PRK13982	475	bifunctional SbtC-like/phosphopantothenoylcysteine	95.8
cd08300	368	alcohol_DH_class_III class III alcohol dehydrogena	95.77
TIGR00561	511	pntA NAD(P) transhydrogenase, alpha subunit. In so	95.77
cd08243	320	quinone_oxidoreductase_like_1 Quinone oxidoreducta	95.75
PLN02740	381	Alcohol dehydrogenase-like	95.74
cd08238	410	sorbose_phosphate_red L-sorbose-1-phosphate reduct	95.73
COG0373	414	HemA Glutamyl-tRNA reductase [Coenzyme metabolism]	95.68
cd08292	324	ETR_like_2 2-enoyl thioester reductase (ETR) like	95.68
COG2130	340	Putative NADP-dependent oxidoreductases [General f	95.66
TIGR03201	349	dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-Co	95.66
cd01080	168	NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of	95.58
cd05295	452	MDH_like Malate dehydrogenase-like. These MDH-like	95.58
PLN02586	360	probable cinnamyl alcohol dehydrogenase	95.55
PRK12550	272	shikimate 5-dehydrogenase; Reviewed	95.55
cd08250	329	Mgc45594_like Mgc45594 gene product and other MDR	95.53
cd01490	435	Ube1_repeat2 Ubiquitin activating enzyme (E1), rep	95.5
cd08301	369	alcohol_DH_plants Plant alcohol dehydrogenase. NAD	95.47
cd08241	323	QOR1 Quinone oxidoreductase (QOR). QOR catalyzes t	95.45
cd08246	393	crotonyl_coA_red crotonyl-CoA reductase. Crotonyl-	95.44
PTZ00354	334	alcohol dehydrogenase; Provisional	95.43
PRK09260	288	3-hydroxybutyryl-CoA dehydrogenase; Validated	95.4
PF02826	178	2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehy	95.37
PRK14192	283	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.33
cd08230	355	glucose_DH Glucose dehydrogenase. Glucose dehydrog	95.33
cd05282	323	ETR_like 2-enoyl thioester reductase-like. 2-enoyl	95.28
PLN02178	375	cinnamyl-alcohol dehydrogenase	95.25
KOG2013	603	consensus SMT3/SUMO-activating complex, catalytic	95.25
cd08297	341	CAD3 Cinnamyl alcohol dehydrogenases (CAD). These	95.25
cd08231	361	MDR_TM0436_like Hypothetical enzyme TM0436 resembl	95.19
PF00107	130	ADH_zinc_N: Zinc-binding dehydrogenase; InterPro:	95.16
cd05286	320	QOR2 Quinone oxidoreductase (QOR). Quinone oxidore	95.16
COG3007	398	Uncharacterized paraquat-inducible protein B [Func	95.12
PRK00094	325	gpsA NAD(P)H-dependent glycerol-3-phosphate dehydr	95.11
cd08291	324	ETR_like_1 2-enoyl thioester reductase (ETR) like	95.1
PRK11199	374	tyrA bifunctional chorismate mutase/prephenate deh	95.05
cd08281	371	liver_ADH_like1 Zinc-dependent alcohol dehydrogena	95.05
PF01118	121	Semialdhyde_dh: Semialdehyde dehydrogenase, NAD bi	95.05
cd08270	305	MDR4 Medium chain dehydrogenases/reductase (MDR)/z	95.02
TIGR00537	179	hemK_rel_arch HemK-related putative methylase. The	95.02
PRK06129	308	3-hydroxyacyl-CoA dehydrogenase; Validated	94.99
PRK15128	396	23S rRNA m(5)C1962 methyltransferase; Provisional	94.98
TIGR00872	298	gnd_rel 6-phosphogluconate dehydrogenase (decarbox	94.98
PRK14967	223	putative methyltransferase; Provisional	94.93
PLN02827	378	Alcohol dehydrogenase-like	94.9
PF03807	96	F420_oxidored: NADP oxidoreductase coenzyme F420-d	94.9
PRK01438	480	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	94.9
PRK12480	330	D-lactate dehydrogenase; Provisional	94.87
COG0476	254	ThiF Dinucleotide-utilizing enzymes involved in mo	94.86
TIGR03451	358	mycoS_dep_FDH mycothiol-dependent formaldehyde deh	94.85
PRK12767	326	carbamoyl phosphate synthase-like protein; Provisi	94.84
PRK05476	425	S-adenosyl-L-homocysteine hydrolase; Provisional	94.8
COG4123	248	Predicted O-methyltransferase [General function pr	94.78
PLN02775	286	Probable dihydrodipicolinate reductase	94.75
cd08248	350	RTN4I1 Human Reticulon 4 Interacting Protein 1. Hu	94.71
TIGR02817	336	adh_fam_1 zinc-binding alcohol dehydrogenase famil	94.71
cd08299	373	alcohol_DH_class_I_II_IV class I, II, IV alcohol d	94.66
TIGR01751	398	crot-CoA-red crotonyl-CoA reductase. The enzyme mo	94.63
cd08233	351	butanediol_DH_like (2R,3R)-2,3-butanediol dehydrog	94.6
PRK09288	395	purT phosphoribosylglycinamide formyltransferase 2	94.59
cd08277	365	liver_alcohol_DH_like Liver alcohol dehydrogenase.	94.57

>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]

Probab=100.00  E-value=3.7e-42  Score=283.53  Aligned_cols=187  Identities=28%  Similarity=0.391  Sum_probs=178.0

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      +++||||||+|||.++|+.|+++|++|++++|++++++++.+++++.+ +..+.++++|+++++++.++.+++.+..+.|
T Consensus         7 ~~~lITGASsGIG~~~A~~lA~~g~~liLvaR~~~kL~~la~~l~~~~-~v~v~vi~~DLs~~~~~~~l~~~l~~~~~~I   85 (265)
T COG0300           7 KTALITGASSGIGAELAKQLARRGYNLILVARREDKLEALAKELEDKT-GVEVEVIPADLSDPEALERLEDELKERGGPI   85 (265)
T ss_pred             cEEEEECCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHHHHHHHHHhh-CceEEEEECcCCChhHHHHHHHHHHhcCCcc
Confidence            579999999999999999999999999999999999999999999877 7789999999999999999999999998899


Q ss_pred             eEEEEcCCCC--CCCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccccCC
Q 025509           81 NILINNAGIM--GTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKIN  158 (251)
Q Consensus        81 d~lv~~ag~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~  158 (251)
                      |+||||||+.  .++.+.++++.++++++|+.+...++++++|.|.++     +.|.||+++|.++..            
T Consensus        86 dvLVNNAG~g~~g~f~~~~~~~~~~mi~lN~~a~~~LT~~~lp~m~~~-----~~G~IiNI~S~ag~~------------  148 (265)
T COG0300          86 DVLVNNAGFGTFGPFLELSLDEEEEMIQLNILALTRLTKAVLPGMVER-----GAGHIINIGSAAGLI------------  148 (265)
T ss_pred             cEEEECCCcCCccchhhCChHHHHHHHHHHHHHHHHHHHHHHHHHHhc-----CCceEEEEechhhcC------------
Confidence            9999999975  457889999999999999999999999999999996     679999999999988            


Q ss_pred             CCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCccc
Q 025509          159 DPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIR  210 (251)
Q Consensus       159 ~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~  210 (251)
                         |.|..+.|++||+++.+|+++|+.|+.+.|  |+|.+|+||++.|++..
T Consensus       149 ---p~p~~avY~ATKa~v~~fSeaL~~EL~~~g--V~V~~v~PG~~~T~f~~  195 (265)
T COG0300         149 ---PTPYMAVYSATKAFVLSFSEALREELKGTG--VKVTAVCPGPTRTEFFD  195 (265)
T ss_pred             ---CCcchHHHHHHHHHHHHHHHHHHHHhcCCC--eEEEEEecCcccccccc
Confidence               788999999999999999999999999999  99999999999999996

>KOG1205 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=100.00  E-value=6.2e-42  Score=284.17  Aligned_cols=191  Identities=31%  Similarity=0.321  Sum_probs=175.7

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      |+|+|||||+|||.++|.+|+++|++++++.|+.++++.+.+++++..+..++.++++|++|.+++.+.++++..++|++
T Consensus        13 kvVvITGASsGIG~~lA~~la~~G~~l~lvar~~rrl~~v~~~l~~~~~~~~v~~~~~Dvs~~~~~~~~~~~~~~~fg~v   92 (282)
T KOG1205|consen   13 KVVLITGASSGIGEALAYELAKRGAKLVLVARRARRLERVAEELRKLGSLEKVLVLQLDVSDEESVKKFVEWAIRHFGRV   92 (282)
T ss_pred             CEEEEeCCCcHHHHHHHHHHHhCCCceEEeehhhhhHHHHHHHHHHhCCcCccEEEeCccCCHHHHHHHHHHHHHhcCCC
Confidence            68999999999999999999999999999999999999999999988765579999999999999999999999999999


Q ss_pred             eEEEEcCCCCCC--CCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccccCC
Q 025509           81 NILINNAGIMGT--PFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKIN  158 (251)
Q Consensus        81 d~lv~~ag~~~~--~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~  158 (251)
                      |+||||||+...  ..+.+.+++..+|++|+.|++.++++++|+|+++     +.|+||++||++|..            
T Consensus        93 DvLVNNAG~~~~~~~~~~~~~~~~~~mdtN~~G~V~~Tk~alp~m~~r-----~~GhIVvisSiaG~~------------  155 (282)
T KOG1205|consen   93 DVLVNNAGISLVGFLEDTDIEDVRNVMDTNVFGTVYLTKAALPSMKKR-----NDGHIVVISSIAGKM------------  155 (282)
T ss_pred             CEEEecCccccccccccCcHHHHHHHhhhhchhhHHHHHHHHHHhhhc-----CCCeEEEEecccccc------------
Confidence            999999998653  4566788899999999999999999999999997     369999999999988            


Q ss_pred             CCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCC
Q 025509          159 DPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRHN  212 (251)
Q Consensus       159 ~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~~  212 (251)
                         +.|..+.|++||+|+++|.++|+.|+.+.+..|++ .|+||+|+|++....
T Consensus       156 ---~~P~~~~Y~ASK~Al~~f~etLR~El~~~~~~i~i-~V~PG~V~Te~~~~~  205 (282)
T KOG1205|consen  156 ---PLPFRSIYSASKHALEGFFETLRQELIPLGTIIII-LVSPGPIETEFTGKE  205 (282)
T ss_pred             ---CCCcccccchHHHHHHHHHHHHHHHhhccCceEEE-EEecCceeecccchh
Confidence               77888899999999999999999999998866777 999999999976643

>COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]

Probab=100.00  E-value=1.2e-40  Score=267.43  Aligned_cols=189  Identities=29%  Similarity=0.331  Sum_probs=173.9

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      |+++|||||+|||.++|++|+++|++|++++|+.++++++..++.+    ..+.++..|++|.++++.+++.+.++++++
T Consensus         7 kv~lITGASSGiG~A~A~~l~~~G~~vvl~aRR~drL~~la~~~~~----~~~~~~~~DVtD~~~~~~~i~~~~~~~g~i   82 (246)
T COG4221           7 KVALITGASSGIGEATARALAEAGAKVVLAARREERLEALADEIGA----GAALALALDVTDRAAVEAAIEALPEEFGRI   82 (246)
T ss_pred             cEEEEecCcchHHHHHHHHHHHCCCeEEEEeccHHHHHHHHHhhcc----CceEEEeeccCCHHHHHHHHHHHHHhhCcc
Confidence            6799999999999999999999999999999999999998888732    578999999999999999999999999999


Q ss_pred             eEEEEcCCCC--CCCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccccCC
Q 025509           81 NILINNAGIM--GTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKIN  158 (251)
Q Consensus        81 d~lv~~ag~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~  158 (251)
                      |+||||||..  .+..+...++|+.++++|+.|.++.+++++|.|.++     ..|.||++||++|..            
T Consensus        83 DiLvNNAGl~~g~~~~~~~~~dw~~Mid~Ni~G~l~~~~avLP~m~~r-----~~G~IiN~~SiAG~~------------  145 (246)
T COG4221          83 DILVNNAGLALGDPLDEADLDDWDRMIDTNVKGLLNGTRAVLPGMVER-----KSGHIINLGSIAGRY------------  145 (246)
T ss_pred             cEEEecCCCCcCChhhhCCHHHHHHHHHHHHHHHHHHHHHhhhHHHhc-----CCceEEEeccccccc------------
Confidence            9999999965  456778999999999999999999999999999997     578999999999987            


Q ss_pred             CCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCCcch
Q 025509          159 DPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRHNSLF  215 (251)
Q Consensus       159 ~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~~~~~  215 (251)
                         +.++...|+++|+++.+|+..|++|+..++  |||..|+||.+.|..+...++.
T Consensus       146 ---~y~~~~vY~ATK~aV~~fs~~LR~e~~g~~--IRVt~I~PG~v~~~~~s~v~~~  197 (246)
T COG4221         146 ---PYPGGAVYGATKAAVRAFSLGLRQELAGTG--IRVTVISPGLVETTEFSTVRFE  197 (246)
T ss_pred             ---cCCCCccchhhHHHHHHHHHHHHHHhcCCC--eeEEEecCceecceecccccCC
Confidence               788889999999999999999999999888  9999999999987766655544

>KOG1200 consensus Mitochondrial/plastidial beta-ketoacyl-ACP reductase [Lipid transport and metabolism]

Probab=100.00  E-value=5.1e-39  Score=247.60  Aligned_cols=213  Identities=28%  Similarity=0.322  Sum_probs=180.1

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      |.++||||++|||+|+++.|+++|++|++.+++...++.....+..   .++-..+.||+++.++++.++++....+|++
T Consensus        15 k~~~vtGg~sGIGrAia~~la~~Garv~v~dl~~~~A~ata~~L~g---~~~h~aF~~DVS~a~~v~~~l~e~~k~~g~p   91 (256)
T KOG1200|consen   15 KVAAVTGGSSGIGRAIAQLLAKKGARVAVADLDSAAAEATAGDLGG---YGDHSAFSCDVSKAHDVQNTLEEMEKSLGTP   91 (256)
T ss_pred             ceeEEecCCchHHHHHHHHHHhcCcEEEEeecchhhHHHHHhhcCC---CCccceeeeccCcHHHHHHHHHHHHHhcCCC
Confidence            4689999999999999999999999999999987777766665521   1467889999999999999999999999999


Q ss_pred             eEEEEcCCCCCC--CCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccccCC
Q 025509           81 NILINNAGIMGT--PFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKIN  158 (251)
Q Consensus        81 d~lv~~ag~~~~--~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~  158 (251)
                      ++||||||+...  +..+..++|++.+.+|+.|.+..+|++.+.+....   +++.+||++||+-+..            
T Consensus        92 svlVncAGItrD~~Llrmkq~qwd~vi~vNL~gvfl~tqaa~r~~~~~~---~~~~sIiNvsSIVGki------------  156 (256)
T KOG1200|consen   92 SVLVNCAGITRDGLLLRMKQEQWDSVIAVNLTGVFLVTQAAVRAMVMNQ---QQGLSIINVSSIVGKI------------  156 (256)
T ss_pred             cEEEEcCccccccceeeccHHHHHHHHHhhchhhHHHHHHHHHHHHHhc---CCCceEEeehhhhccc------------
Confidence            999999999865  67789999999999999999999999999966542   2456999999998887            


Q ss_pred             CCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCCcchhhhhhhhhhhhhHhhhccccChH
Q 025509          159 DPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRHNSLFRSMNTILHALPGIAGKCLLKNVQ  238 (251)
Q Consensus       159 ~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (251)
                         +.-+++.|+++|.++.+|++++|+|+++++  ||||.|+||+|.|||++..++ ...+.+..-+|-    ..+..++
T Consensus       157 ---GN~GQtnYAAsK~GvIgftktaArEla~kn--IrvN~VlPGFI~tpMT~~mp~-~v~~ki~~~iPm----gr~G~~E  226 (256)
T KOG1200|consen  157 ---GNFGQTNYAASKGGVIGFTKTAARELARKN--IRVNVVLPGFIATPMTEAMPP-KVLDKILGMIPM----GRLGEAE  226 (256)
T ss_pred             ---ccccchhhhhhcCceeeeeHHHHHHHhhcC--ceEeEeccccccChhhhhcCH-HHHHHHHccCCc----cccCCHH
Confidence               566788999999999999999999999999  999999999999999997654 444444433332    4444555


Q ss_pred             HHH
Q 025509          239 QVI  241 (251)
Q Consensus       239 ~~~  241 (251)
                      +.+
T Consensus       227 evA  229 (256)
T KOG1200|consen  227 EVA  229 (256)
T ss_pred             HHH
Confidence            554

>KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism]

Probab=100.00  E-value=3.3e-38  Score=259.88  Aligned_cols=188  Identities=27%  Similarity=0.373  Sum_probs=175.8

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      ++||||||++|+|+++|.+|+++|+++++.+.|.+..++..+++++.   +.+..+.||+++.+++.++.+++++++|.+
T Consensus        39 ~~vLITGgg~GlGr~ialefa~rg~~~vl~Din~~~~~etv~~~~~~---g~~~~y~cdis~~eei~~~a~~Vk~e~G~V  115 (300)
T KOG1201|consen   39 EIVLITGGGSGLGRLIALEFAKRGAKLVLWDINKQGNEETVKEIRKI---GEAKAYTCDISDREEIYRLAKKVKKEVGDV  115 (300)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHhCCeEEEEeccccchHHHHHHHHhc---CceeEEEecCCCHHHHHHHHHHHHHhcCCc
Confidence            47999999999999999999999999999999999999999998776   389999999999999999999999999999


Q ss_pred             eEEEEcCCCCC--CCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccccCC
Q 025509           81 NILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKIN  158 (251)
Q Consensus        81 d~lv~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~  158 (251)
                      |+||||||+..  ++.+.+.+++++.+++|+.|++..+++|+|.|.+.     +.|+||.++|.+|..            
T Consensus       116 ~ILVNNAGI~~~~~ll~~~d~ei~k~~~vN~~~~f~t~kaFLP~M~~~-----~~GHIV~IaS~aG~~------------  178 (300)
T KOG1201|consen  116 DILVNNAGIVTGKKLLDCSDEEIQKTFDVNTIAHFWTTKAFLPKMLEN-----NNGHIVTIASVAGLF------------  178 (300)
T ss_pred             eEEEeccccccCCCccCCCHHHHHHHHHHhhHHHHHHHHHHhHHHHhc-----CCceEEEehhhhccc------------
Confidence            99999999864  47788999999999999999999999999999996     689999999999988            


Q ss_pred             CCCCCCcccccchhHHHHHHHHHHHHHHhccCCC-cEEEEEeeCCcccCCcccC
Q 025509          159 DPSGYNGFRAYSQSKLANILHANELARRLKEDGV-DITANSVHPGAIATNIIRH  211 (251)
Q Consensus       159 ~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~-~i~v~~v~Pg~v~t~~~~~  211 (251)
                         +.++..+|++||+|+.+|.++|..|+...+. +|+...|||++++|+|...
T Consensus       179 ---g~~gl~~YcaSK~a~vGfhesL~~EL~~~~~~~IktTlv~P~~i~Tgmf~~  229 (300)
T KOG1201|consen  179 ---GPAGLADYCASKFAAVGFHESLSMELRALGKDGIKTTLVCPYFINTGMFDG  229 (300)
T ss_pred             ---CCccchhhhhhHHHHHHHHHHHHHHHHhcCCCCeeEEEEeeeeccccccCC
Confidence               7889999999999999999999999987765 3999999999999999885

>PRK08339 short chain dehydrogenase; Provisional

Probab=100.00  E-value=4.7e-37  Score=258.31  Aligned_cols=186  Identities=24%  Similarity=0.258  Sum_probs=166.9

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      |++|||||++|||+++|++|+++|++|++++|+.+++++..+++.+.. +.++.++++|++|+++++++++++. ++|++
T Consensus         9 k~~lItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~Dv~~~~~i~~~~~~~~-~~g~i   86 (263)
T PRK08339          9 KLAFTTASSKGIGFGVARVLARAGADVILLSRNEENLKKAREKIKSES-NVDVSYIVADLTKREDLERTVKELK-NIGEP   86 (263)
T ss_pred             CEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhc-CCceEEEEecCCCHHHHHHHHHHHH-hhCCC
Confidence            589999999999999999999999999999999888888877776543 4568899999999999999999985 58899


Q ss_pred             eEEEEcCCCCC--CCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccccCC
Q 025509           81 NILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKIN  158 (251)
Q Consensus        81 d~lv~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~  158 (251)
                      |++|||||...  ++.+.+.++|++.+++|+.+++.++++++|+|+++     +.|+||++||.++..            
T Consensus        87 D~lv~nag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~m~~~-----~~g~Ii~isS~~~~~------------  149 (263)
T PRK08339         87 DIFFFSTGGPKPGYFMEMSMEDWEGAVKLLLYPAVYLTRALVPAMERK-----GFGRIIYSTSVAIKE------------  149 (263)
T ss_pred             cEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-----CCCEEEEEcCccccC------------
Confidence            99999999753  35678899999999999999999999999999875     468999999987665            


Q ss_pred             CCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCccc
Q 025509          159 DPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIR  210 (251)
Q Consensus       159 ~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~  210 (251)
                         +.+.+..|+++|+|+.+|+++++.|++++|  |+||+|+||+++|++..
T Consensus       150 ---~~~~~~~y~asKaal~~l~~~la~el~~~g--IrVn~v~PG~v~T~~~~  196 (263)
T PRK08339        150 ---PIPNIALSNVVRISMAGLVRTLAKELGPKG--ITVNGIMPGIIRTDRVI  196 (263)
T ss_pred             ---CCCcchhhHHHHHHHHHHHHHHHHHhcccC--eEEEEEEeCcCccHHHH
Confidence               667788999999999999999999999999  99999999999999864

>PRK08415 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=1.3e-36  Score=257.04  Aligned_cols=183  Identities=19%  Similarity=0.210  Sum_probs=158.5

Q ss_pred             CEEEEECCC--ChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCC
Q 025509            1 MDIVITGAT--SGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHH   78 (251)
Q Consensus         1 k~vlItG~s--~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g   78 (251)
                      |++|||||+  +|||+++|++|+++|++|++++|+.. ..+..+++.+... .. .++++|++|.++++++++++.+++|
T Consensus         6 k~~lItGas~~~GIG~aiA~~la~~G~~Vil~~r~~~-~~~~~~~~~~~~~-~~-~~~~~Dv~d~~~v~~~~~~i~~~~g   82 (274)
T PRK08415          6 KKGLIVGVANNKSIAYGIAKACFEQGAELAFTYLNEA-LKKRVEPIAQELG-SD-YVYELDVSKPEHFKSLAESLKKDLG   82 (274)
T ss_pred             cEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEecCHH-HHHHHHHHHHhcC-Cc-eEEEecCCCHHHHHHHHHHHHHHcC
Confidence            689999997  89999999999999999999999853 3333444444432 23 6789999999999999999999999


Q ss_pred             CeeEEEEcCCCCC------CCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCc
Q 025509           79 QLNILINNAGIMG------TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGI  152 (251)
Q Consensus        79 ~id~lv~~ag~~~------~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~  152 (251)
                      ++|+||||||+..      ++.+.+.++|++++++|+.+++.++++++|+|.+       .|+||++||.++..      
T Consensus        83 ~iDilVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~-------~g~Iv~isS~~~~~------  149 (274)
T PRK08415         83 KIDFIVHSVAFAPKEALEGSFLETSKEAFNIAMEISVYSLIELTRALLPLLND-------GASVLTLSYLGGVK------  149 (274)
T ss_pred             CCCEEEECCccCcccccccccccCCHHHHHHHhhhhhHHHHHHHHHHHHHhcc-------CCcEEEEecCCCcc------
Confidence            9999999999742      3557788999999999999999999999999964       47999999987654      


Q ss_pred             ccccCCCCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCccc
Q 025509          153 RFDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIR  210 (251)
Q Consensus       153 ~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~  210 (251)
                               +.+.+..|++||+|+.+|+++|+.|+.++|  |+||+|+||+++|++..
T Consensus       150 ---------~~~~~~~Y~asKaal~~l~~~la~el~~~g--IrVn~v~PG~v~T~~~~  196 (274)
T PRK08415        150 ---------YVPHYNVMGVAKAALESSVRYLAVDLGKKG--IRVNAISAGPIKTLAAS  196 (274)
T ss_pred             ---------CCCcchhhhhHHHHHHHHHHHHHHHhhhcC--eEEEEEecCccccHHHh
Confidence                     567778999999999999999999999999  99999999999998754

>PRK06079 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=2.2e-36  Score=252.75  Aligned_cols=182  Identities=16%  Similarity=0.178  Sum_probs=159.0

Q ss_pred             CEEEEECCC--ChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCC
Q 025509            1 MDIVITGAT--SGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHH   78 (251)
Q Consensus         1 k~vlItG~s--~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g   78 (251)
                      |++|||||+  +|||+++|++|+++|++|++++|+. +.++..+++.    +..+.++++|++++++++++++++.+++|
T Consensus         8 k~~lItGas~~~gIG~a~a~~la~~G~~Vi~~~r~~-~~~~~~~~~~----~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g   82 (252)
T PRK06079          8 KKIVVMGVANKRSIAWGCAQAIKDQGATVIYTYQND-RMKKSLQKLV----DEEDLLVECDVASDESIERAFATIKERVG   82 (252)
T ss_pred             CEEEEeCCCCCCchHHHHHHHHHHCCCEEEEecCch-HHHHHHHhhc----cCceeEEeCCCCCHHHHHHHHHHHHHHhC
Confidence            689999999  8999999999999999999999983 4443333332    34578899999999999999999999999


Q ss_pred             CeeEEEEcCCCCC------CCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCc
Q 025509           79 QLNILINNAGIMG------TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGI  152 (251)
Q Consensus        79 ~id~lv~~ag~~~------~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~  152 (251)
                      ++|+||||||...      ++.+.+.++|+..+++|+.+++.++++++|+|.+       .|+||++||.++..      
T Consensus        83 ~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~in~~~~~~l~~~~~~~~~~-------~g~Iv~iss~~~~~------  149 (252)
T PRK06079         83 KIDGIVHAIAYAKKEELGGNVTDTSRDGYALAQDISAYSLIAVAKYARPLLNP-------GASIVTLTYFGSER------  149 (252)
T ss_pred             CCCEEEEcccccccccccCCcccCCHHHHHHHhCcccHHHHHHHHHHHHhccc-------CceEEEEeccCccc------
Confidence            9999999999752      3557788999999999999999999999999853       47999999987655      


Q ss_pred             ccccCCCCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccC
Q 025509          153 RFDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  211 (251)
Q Consensus       153 ~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  211 (251)
                               +.+.+..|+++|+|+.+|+++|+.|+.++|  |+||+|+||+|+|++...
T Consensus       150 ---------~~~~~~~Y~asKaal~~l~~~la~el~~~g--I~vn~i~PG~v~T~~~~~  197 (252)
T PRK06079        150 ---------AIPNYNVMGIAKAALESSVRYLARDLGKKG--IRVNAISAGAVKTLAVTG  197 (252)
T ss_pred             ---------cCCcchhhHHHHHHHHHHHHHHHHHhhhcC--cEEEEEecCccccccccc
Confidence                     567788999999999999999999999999  999999999999998654

>PRK07063 short chain dehydrogenase; Provisional

Probab=100.00  E-value=5.5e-36  Score=251.09  Aligned_cols=189  Identities=25%  Similarity=0.350  Sum_probs=169.6

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      |++|||||++|||+++|++|+++|++|++++|+.+.+++..+++.+...+.++.++++|+++++++.++++++.+.++++
T Consensus         8 k~vlVtGas~gIG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~i   87 (260)
T PRK07063          8 KVALVTGAAQGIGAAIARAFAREGAAVALADLDAALAERAAAAIARDVAGARVLAVPADVTDAASVAAAVAAAEEAFGPL   87 (260)
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhccCCceEEEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence            68999999999999999999999999999999988888888877654345678899999999999999999999999999


Q ss_pred             eEEEEcCCCCC--CCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccccCC
Q 025509           81 NILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKIN  158 (251)
Q Consensus        81 d~lv~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~  158 (251)
                      |++|||||...  ++.+.+.++|+..+++|+.+++.++++++|.|+++     +.++||++||..+..            
T Consensus        88 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-----~~g~iv~isS~~~~~------------  150 (260)
T PRK07063         88 DVLVNNAGINVFADPLAMTDEDWRRCFAVDLDGAWNGCRAVLPGMVER-----GRGSIVNIASTHAFK------------  150 (260)
T ss_pred             cEEEECCCcCCCCChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhh-----CCeEEEEECChhhcc------------
Confidence            99999999643  35567889999999999999999999999999875     468999999987665            


Q ss_pred             CCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccC
Q 025509          159 DPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  211 (251)
Q Consensus       159 ~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  211 (251)
                         +.++..+|+++|+|+++|+++++.|+++.|  |+||+|+||+++|++...
T Consensus       151 ---~~~~~~~Y~~sKaa~~~~~~~la~el~~~g--Irvn~v~PG~v~t~~~~~  198 (260)
T PRK07063        151 ---IIPGCFPYPVAKHGLLGLTRALGIEYAARN--VRVNAIAPGYIETQLTED  198 (260)
T ss_pred             ---CCCCchHHHHHHHHHHHHHHHHHHHhCccC--eEEEEEeeCCccChhhhh
Confidence               566778999999999999999999999999  999999999999998653

>PRK06505 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=2e-36  Score=255.52  Aligned_cols=183  Identities=16%  Similarity=0.203  Sum_probs=158.2

Q ss_pred             CEEEEECCCC--hhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCC
Q 025509            1 MDIVITGATS--GIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHH   78 (251)
Q Consensus         1 k~vlItG~s~--gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g   78 (251)
                      |++|||||++  |||+++|++|+++|++|++++|+....+. .+++.+.. +. ..++++|++|.++++++++++.+++|
T Consensus         8 k~~lVTGas~~~GIG~aiA~~la~~Ga~V~~~~r~~~~~~~-~~~~~~~~-g~-~~~~~~Dv~d~~~v~~~~~~~~~~~g   84 (271)
T PRK06505          8 KRGLIMGVANDHSIAWGIAKQLAAQGAELAFTYQGEALGKR-VKPLAESL-GS-DFVLPCDVEDIASVDAVFEALEKKWG   84 (271)
T ss_pred             CEEEEeCCCCCCcHHHHHHHHHHhCCCEEEEecCchHHHHH-HHHHHHhc-CC-ceEEeCCCCCHHHHHHHHHHHHHHhC
Confidence            6899999997  99999999999999999999997543333 33443332 22 35789999999999999999999999


Q ss_pred             CeeEEEEcCCCCC------CCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCc
Q 025509           79 QLNILINNAGIMG------TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGI  152 (251)
Q Consensus        79 ~id~lv~~ag~~~------~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~  152 (251)
                      ++|+||||||+..      ++.+.+.++|++.+++|+.+++.++++++|+|.+       .|+||++||.++..      
T Consensus        85 ~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~m~~-------~G~Iv~isS~~~~~------  151 (271)
T PRK06505         85 KLDFVVHAIGFSDKNELKGRYADTTRENFSRTMVISCFSFTEIAKRAAKLMPD-------GGSMLTLTYGGSTR------  151 (271)
T ss_pred             CCCEEEECCccCCCccccCChhhcCHHHHHHHHhhhhhhHHHHHHHHHHhhcc-------CceEEEEcCCCccc------
Confidence            9999999999753      3457788999999999999999999999999963       47999999987655      


Q ss_pred             ccccCCCCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCccc
Q 025509          153 RFDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIR  210 (251)
Q Consensus       153 ~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~  210 (251)
                               +.+.+.+|+++|+|+.+|+++|+.|++++|  |+||+|+||+++|++..
T Consensus       152 ---------~~~~~~~Y~asKaAl~~l~r~la~el~~~g--IrVn~v~PG~i~T~~~~  198 (271)
T PRK06505        152 ---------VMPNYNVMGVAKAALEASVRYLAADYGPQG--IRVNAISAGPVRTLAGA  198 (271)
T ss_pred             ---------cCCccchhhhhHHHHHHHHHHHHHHHhhcC--eEEEEEecCCccccccc
Confidence                     567788999999999999999999999999  99999999999999864

>PRK07062 short chain dehydrogenase; Provisional

Probab=100.00  E-value=7.1e-36  Score=251.06  Aligned_cols=188  Identities=23%  Similarity=0.239  Sum_probs=171.0

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      |++|||||++|||+++|++|+++|++|++++|+.+++++..+++.+.+++.++.++++|+++.+++.++++++.+.++++
T Consensus         9 k~~lItGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~i   88 (265)
T PRK07062          9 RVAVVTGGSSGIGLATVELLLEAGASVAICGRDEERLASAEARLREKFPGARLLAARCDVLDEADVAAFAAAVEARFGGV   88 (265)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEecCCCHHHHHHHHHHHHHhcCCC
Confidence            57999999999999999999999999999999998888888888777666678899999999999999999999999999


Q ss_pred             eEEEEcCCCCC--CCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccccCC
Q 025509           81 NILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKIN  158 (251)
Q Consensus        81 d~lv~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~  158 (251)
                      |+||||||...  ++.+.+.++|++.+++|+.+++.+++.++|+|+++     +.|+||++||..+..            
T Consensus        89 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-----~~g~iv~isS~~~~~------------  151 (265)
T PRK07062         89 DMLVNNAGQGRVSTFADTTDDAWRDELELKYFSVINPTRAFLPLLRAS-----AAASIVCVNSLLALQ------------  151 (265)
T ss_pred             CEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcc-----CCcEEEEeccccccC------------
Confidence            99999999753  35667888999999999999999999999999875     468999999987765            


Q ss_pred             CCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCccc
Q 025509          159 DPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIR  210 (251)
Q Consensus       159 ~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~  210 (251)
                         +.+....|+++|+|+.+|+++|+.|+.++|  |+||+|+||+++|++..
T Consensus       152 ---~~~~~~~y~asKaal~~~~~~la~e~~~~g--i~v~~i~PG~v~t~~~~  198 (265)
T PRK07062        152 ---PEPHMVATSAARAGLLNLVKSLATELAPKG--VRVNSILLGLVESGQWR  198 (265)
T ss_pred             ---CCCCchHhHHHHHHHHHHHHHHHHHhhhcC--eEEEEEecCccccchhh
Confidence               567778999999999999999999999999  99999999999999865

>PRK08690 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=9.7e-36  Score=250.06  Aligned_cols=185  Identities=15%  Similarity=0.144  Sum_probs=158.5

Q ss_pred             CEEEEECC--CChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCC
Q 025509            1 MDIVITGA--TSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHH   78 (251)
Q Consensus         1 k~vlItG~--s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g   78 (251)
                      |++|||||  ++|||+++|++|+++|++|++++|+. +.++..+++.+..  .....+++|++|+++++++++++.+++|
T Consensus         7 k~~lITGa~~~~GIG~a~a~~l~~~G~~v~~~~~~~-~~~~~~~~~~~~~--~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   83 (261)
T PRK08690          7 KKILITGMISERSIAYGIAKACREQGAELAFTYVVD-KLEERVRKMAAEL--DSELVFRCDVASDDEINQVFADLGKHWD   83 (261)
T ss_pred             cEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCcH-HHHHHHHHHHhcc--CCceEEECCCCCHHHHHHHHHHHHHHhC
Confidence            58999997  67999999999999999999988863 4445555554443  2345789999999999999999999999


Q ss_pred             CeeEEEEcCCCCCC-------CCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCC
Q 025509           79 QLNILINNAGIMGT-------PFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEG  151 (251)
Q Consensus        79 ~id~lv~~ag~~~~-------~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~  151 (251)
                      ++|++|||||+...       ..+.+.++|+.++++|+.+++.++++++|+|+++      .|+||++||.++..     
T Consensus        84 ~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~p~m~~~------~g~Iv~iss~~~~~-----  152 (261)
T PRK08690         84 GLDGLVHSIGFAPKEALSGDFLDSISREAFNTAHEISAYSLPALAKAARPMMRGR------NSAIVALSYLGAVR-----  152 (261)
T ss_pred             CCcEEEECCccCCccccccchhhhcCHHHHHHHHHhchHHHHHHHHHHHHHhhhc------CcEEEEEccccccc-----
Confidence            99999999997532       2346778899999999999999999999998653      57999999987665     


Q ss_pred             cccccCCCCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccC
Q 025509          152 IRFDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  211 (251)
Q Consensus       152 ~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  211 (251)
                                +.+++..|+++|+|+.+|+++++.|++++|  |+||+|+||+++|++...
T Consensus       153 ----------~~~~~~~Y~asKaal~~l~~~la~e~~~~g--IrVn~i~PG~v~T~~~~~  200 (261)
T PRK08690        153 ----------AIPNYNVMGMAKASLEAGIRFTAACLGKEG--IRCNGISAGPIKTLAASG  200 (261)
T ss_pred             ----------CCCCcccchhHHHHHHHHHHHHHHHhhhcC--eEEEEEecCcccchhhhc
Confidence                      667888999999999999999999999999  999999999999998654

>PRK07478 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.8e-35  Score=247.18  Aligned_cols=189  Identities=30%  Similarity=0.350  Sum_probs=168.2

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      |++|||||++|||.++|++|+++|++|++++|+++++++..+++.+.  +.++.++.+|++++++++++++++.++++++
T Consensus         7 k~~lItGas~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   84 (254)
T PRK07478          7 KVAIITGASSGIGRAAAKLFAREGAKVVVGARRQAELDQLVAEIRAE--GGEAVALAGDVRDEAYAKALVALAVERFGGL   84 (254)
T ss_pred             CEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCcEEEEEcCCCCHHHHHHHHHHHHHhcCCC
Confidence            58999999999999999999999999999999988888887777554  4568899999999999999999999999999


Q ss_pred             eEEEEcCCCCC---CCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccccC
Q 025509           81 NILINNAGIMG---TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKI  157 (251)
Q Consensus        81 d~lv~~ag~~~---~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~  157 (251)
                      |+||||||...   +..+.+.++|++.+++|+.+++.++++++|.|+++     ..++||++||..+...          
T Consensus        85 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~-----~~~~iv~~sS~~~~~~----------  149 (254)
T PRK07478         85 DIAFNNAGTLGEMGPVAEMSLEGWRETLATNLTSAFLGAKHQIPAMLAR-----GGGSLIFTSTFVGHTA----------  149 (254)
T ss_pred             CEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-----CCceEEEEechHhhcc----------
Confidence            99999999753   34567889999999999999999999999999875     4689999999776421          


Q ss_pred             CCCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCC
Q 025509          158 NDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRHN  212 (251)
Q Consensus       158 ~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~~  212 (251)
                          +.+++..|++||+|+++|+++++.|+.++|  |+||+|+||+++|++.+..
T Consensus       150 ----~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g--i~v~~v~PG~v~t~~~~~~  198 (254)
T PRK07478        150 ----GFPGMAAYAASKAGLIGLTQVLAAEYGAQG--IRVNALLPGGTDTPMGRAM  198 (254)
T ss_pred             ----CCCCcchhHHHHHHHHHHHHHHHHHHhhcC--EEEEEEeeCcccCcccccc
Confidence                456778999999999999999999999999  9999999999999987643

>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=100.00  E-value=1.2e-35  Score=248.17  Aligned_cols=186  Identities=24%  Similarity=0.280  Sum_probs=161.8

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      |++|||||++|||+++|++|+++|++|++++|+.  .++..+.+.+.  +.++.++.+|++++++++++++++.+.+|++
T Consensus         9 k~~lItGas~gIG~aia~~l~~~G~~vv~~~~~~--~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~i   84 (251)
T PRK12481          9 KVAIITGCNTGLGQGMAIGLAKAGADIVGVGVAE--APETQAQVEAL--GRKFHFITADLIQQKDIDSIVSQAVEVMGHI   84 (251)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEecCch--HHHHHHHHHHc--CCeEEEEEeCCCCHHHHHHHHHHHHHHcCCC
Confidence            6899999999999999999999999999998864  23333444332  4578899999999999999999999999999


Q ss_pred             eEEEEcCCCCC--CCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccccCC
Q 025509           81 NILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKIN  158 (251)
Q Consensus        81 d~lv~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~  158 (251)
                      |++|||||...  ++.+.++++|++.+++|+.+++.++++++|+|+++.    ..|+||++||..+..            
T Consensus        85 D~lv~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~----~~g~ii~isS~~~~~------------  148 (251)
T PRK12481         85 DILINNAGIIRRQDLLEFGNKDWDDVININQKTVFFLSQAVAKQFVKQG----NGGKIINIASMLSFQ------------  148 (251)
T ss_pred             CEEEECCCcCCCCCcccCCHHHHHHHheeCcHHHHHHHHHHHHHHHHcC----CCCEEEEeCChhhcC------------
Confidence            99999999753  355678899999999999999999999999998741    258999999987765            


Q ss_pred             CCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccC
Q 025509          159 DPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  211 (251)
Q Consensus       159 ~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  211 (251)
                         +.+....|++||+|+++|+++++.|+.+.|  |+||+|+||+++|++...
T Consensus       149 ---~~~~~~~Y~asK~a~~~l~~~la~e~~~~g--irvn~v~PG~v~t~~~~~  196 (251)
T PRK12481        149 ---GGIRVPSYTASKSAVMGLTRALATELSQYN--INVNAIAPGYMATDNTAA  196 (251)
T ss_pred             ---CCCCCcchHHHHHHHHHHHHHHHHHHhhcC--eEEEEEecCCCccCchhh
Confidence               556677999999999999999999999999  999999999999998764

>PRK05854 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.3e-35  Score=253.92  Aligned_cols=200  Identities=42%  Similarity=0.592  Sum_probs=173.0

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      |+++||||++|||+++|++|+++|++|++++|+.+++++..+++.+..++..+.++.+|+++.++++++++++.++++++
T Consensus        15 k~~lITGas~GIG~~~a~~La~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~d~~sv~~~~~~~~~~~~~i   94 (313)
T PRK05854         15 KRAVVTGASDGLGLGLARRLAAAGAEVILPVRNRAKGEAAVAAIRTAVPDAKLSLRALDLSSLASVAALGEQLRAEGRPI   94 (313)
T ss_pred             CEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEecCCCHHHHHHHHHHHHHhCCCc
Confidence            68999999999999999999999999999999999999888888776666678999999999999999999999999999


Q ss_pred             eEEEEcCCCCCC-CCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccccCCC
Q 025509           81 NILINNAGIMGT-PFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKIND  159 (251)
Q Consensus        81 d~lv~~ag~~~~-~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~  159 (251)
                      |+||||||+..+ ..+.+.++++..+++|+.+++.+++.++|.|++.      .++||++||.++..+   ...|.++..
T Consensus        95 D~li~nAG~~~~~~~~~t~~~~e~~~~vN~~g~~~l~~~llp~l~~~------~~riv~vsS~~~~~~---~~~~~~~~~  165 (313)
T PRK05854         95 HLLINNAGVMTPPERQTTADGFELQFGTNHLGHFALTAHLLPLLRAG------RARVTSQSSIAARRG---AINWDDLNW  165 (313)
T ss_pred             cEEEECCccccCCccccCcccHHHHhhhhhHHHHHHHHHHHHHHHhC------CCCeEEEechhhcCC---CcCcccccc
Confidence            999999997653 3356788999999999999999999999999763      579999999876543   233444444


Q ss_pred             CCCCCcccccchhHHHHHHHHHHHHHHhc--cCCCcEEEEEeeCCcccCCcccC
Q 025509          160 PSGYNGFRAYSQSKLANILHANELARRLK--EDGVDITANSVHPGAIATNIIRH  211 (251)
Q Consensus       160 ~~~~~~~~~Y~~sK~a~~~~~~~la~e~~--~~g~~i~v~~v~Pg~v~t~~~~~  211 (251)
                      ..+.+++..|+.||+|+.+|++.|+.++.  +.|  |+||+|+||++.|++...
T Consensus       166 ~~~~~~~~~Y~~SK~a~~~~~~~la~~~~~~~~g--I~v~~v~PG~v~T~~~~~  217 (313)
T PRK05854        166 ERSYAGMRAYSQSKIAVGLFALELDRRSRAAGWG--ITSNLAHPGVAPTNLLAA  217 (313)
T ss_pred             cccCcchhhhHHHHHHHHHHHHHHHHHhhcCCCC--eEEEEEecceeccCcccc
Confidence            45566778999999999999999998754  445  999999999999998754

>PRK08594 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=9.1e-36  Score=249.69  Aligned_cols=185  Identities=15%  Similarity=0.144  Sum_probs=159.1

Q ss_pred             CEEEEECCC--ChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCC
Q 025509            1 MDIVITGAT--SGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHH   78 (251)
Q Consensus         1 k~vlItG~s--~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g   78 (251)
                      |+++||||+  +|||+++|++|+++|++|++++|+... .+..+++.+...+.++.++++|++|+++++++++++.+++|
T Consensus         8 k~~lItGa~~s~GIG~aia~~la~~G~~v~~~~r~~~~-~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g   86 (257)
T PRK08594          8 KTYVVMGVANKRSIAWGIARSLHNAGAKLVFTYAGERL-EKEVRELADTLEGQESLLLPCDVTSDEEITACFETIKEEVG   86 (257)
T ss_pred             CEEEEECCCCCCCHHHHHHHHHHHCCCEEEEecCcccc-hHHHHHHHHHcCCCceEEEecCCCCHHHHHHHHHHHHHhCC
Confidence            689999997  899999999999999999999876422 22333343433345688899999999999999999999999


Q ss_pred             CeeEEEEcCCCCC------CCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCc
Q 025509           79 QLNILINNAGIMG------TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGI  152 (251)
Q Consensus        79 ~id~lv~~ag~~~------~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~  152 (251)
                      ++|++|||||+..      ++.+.+.++|++.+++|+.+++.++++++|+|.+       .|+||++||.++..      
T Consensus        87 ~ld~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~-------~g~Iv~isS~~~~~------  153 (257)
T PRK08594         87 VIHGVAHCIAFANKEDLRGEFLETSRDGFLLAQNISAYSLTAVAREAKKLMTE-------GGSIVTLTYLGGER------  153 (257)
T ss_pred             CccEEEECcccCCCCcCCCccccCCHHHHHHHHhhhHHHHHHHHHHHHHhccc-------CceEEEEcccCCcc------
Confidence            9999999999642      3456788999999999999999999999999853       48999999987765      


Q ss_pred             ccccCCCCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCccc
Q 025509          153 RFDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIR  210 (251)
Q Consensus       153 ~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~  210 (251)
                               +.+.+..|++||+|+++|+++|+.|+.++|  |+||+|+||+++|++..
T Consensus       154 ---------~~~~~~~Y~asKaal~~l~~~la~el~~~g--Irvn~v~PG~v~T~~~~  200 (257)
T PRK08594        154 ---------VVQNYNVMGVAKASLEASVKYLANDLGKDG--IRVNAISAGPIRTLSAK  200 (257)
T ss_pred             ---------CCCCCchhHHHHHHHHHHHHHHHHHhhhcC--CEEeeeecCcccCHhHh
Confidence                     567778999999999999999999999999  99999999999999754

>PRK06603 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=8.6e-36  Score=250.23  Aligned_cols=183  Identities=17%  Similarity=0.183  Sum_probs=158.7

Q ss_pred             CEEEEECCCC--hhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCC
Q 025509            1 MDIVITGATS--GIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHH   78 (251)
Q Consensus         1 k~vlItG~s~--gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g   78 (251)
                      |++|||||++  |||+++|++|+++|++|++++|+. ..++..+++.+.. +. ..++++|++|+++++++++++.+++|
T Consensus         9 k~~lITGas~~~GIG~a~a~~la~~G~~v~~~~r~~-~~~~~~~~l~~~~-g~-~~~~~~Dv~~~~~v~~~~~~~~~~~g   85 (260)
T PRK06603          9 KKGLITGIANNMSISWAIAQLAKKHGAELWFTYQSE-VLEKRVKPLAEEI-GC-NFVSELDVTNPKSISNLFDDIKEKWG   85 (260)
T ss_pred             cEEEEECCCCCcchHHHHHHHHHHcCCEEEEEeCch-HHHHHHHHHHHhc-CC-ceEEEccCCCHHHHHHHHHHHHHHcC
Confidence            6899999997  999999999999999999999874 4445555555443 22 34678999999999999999999999


Q ss_pred             CeeEEEEcCCCCC------CCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCc
Q 025509           79 QLNILINNAGIMG------TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGI  152 (251)
Q Consensus        79 ~id~lv~~ag~~~------~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~  152 (251)
                      ++|+||||||...      ++.+.+.++|++.+++|+.+++.++++++|+|.+       .|+||++||.++..      
T Consensus        86 ~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~m~~-------~G~Iv~isS~~~~~------  152 (260)
T PRK06603         86 SFDFLLHGMAFADKNELKGRYVDTSLENFHNSLHISCYSLLELSRSAEALMHD-------GGSIVTLTYYGAEK------  152 (260)
T ss_pred             CccEEEEccccCCcccccCccccCCHHHHHHHHHHHHHHHHHHHHHHHhhhcc-------CceEEEEecCcccc------
Confidence            9999999999742      3557788999999999999999999999999953       48999999977654      


Q ss_pred             ccccCCCCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCccc
Q 025509          153 RFDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIR  210 (251)
Q Consensus       153 ~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~  210 (251)
                               +.+.+..|++||+|+.+|+++|+.|++++|  |+||+|+||+++|++..
T Consensus       153 ---------~~~~~~~Y~asKaal~~l~~~la~el~~~g--IrVn~v~PG~v~T~~~~  199 (260)
T PRK06603        153 ---------VIPNYNVMGVAKAALEASVKYLANDMGENN--IRVNAISAGPIKTLASS  199 (260)
T ss_pred             ---------CCCcccchhhHHHHHHHHHHHHHHHhhhcC--eEEEEEecCcCcchhhh
Confidence                     567788999999999999999999999999  99999999999999854

>PRK08589 short chain dehydrogenase; Validated

Probab=100.00  E-value=1.7e-35  Score=250.00  Aligned_cols=185  Identities=32%  Similarity=0.400  Sum_probs=165.7

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      |++|||||++|||+++|+.|+++|++|++++|+ +.+++..+++.+.  +.++.++++|+++.++++++++++.+.+|++
T Consensus         7 k~vlItGas~gIG~aia~~l~~~G~~vi~~~r~-~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~i   83 (272)
T PRK08589          7 KVAVITGASTGIGQASAIALAQEGAYVLAVDIA-EAVSETVDKIKSN--GGKAKAYHVDISDEQQVKDFASEIKEQFGRV   83 (272)
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCCEEEEEeCc-HHHHHHHHHHHhc--CCeEEEEEeecCCHHHHHHHHHHHHHHcCCc
Confidence            589999999999999999999999999999999 7777777777543  4568899999999999999999999999999


Q ss_pred             eEEEEcCCCCC---CCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccccC
Q 025509           81 NILINNAGIMG---TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKI  157 (251)
Q Consensus        81 d~lv~~ag~~~---~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~  157 (251)
                      |+||||||...   +..+.+.+.|++++++|+.+++.++++++|+++++      +|+||++||..+..           
T Consensus        84 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~------~g~iv~isS~~~~~-----------  146 (272)
T PRK08589         84 DVLFNNAGVDNAAGRIHEYPVDVFDKIMAVDMRGTFLMTKMLLPLMMEQ------GGSIINTSSFSGQA-----------  146 (272)
T ss_pred             CEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc------CCEEEEeCchhhcC-----------
Confidence            99999999753   34567888999999999999999999999999864      48999999987765           


Q ss_pred             CCCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccC
Q 025509          158 NDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  211 (251)
Q Consensus       158 ~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  211 (251)
                          +.+....|++||+|+++|+++++.|+.++|  |+||+|+||+++|++.+.
T Consensus       147 ----~~~~~~~Y~asKaal~~l~~~la~e~~~~g--I~v~~v~PG~v~T~~~~~  194 (272)
T PRK08589        147 ----ADLYRSGYNAAKGAVINFTKSIAIEYGRDG--IRANAIAPGTIETPLVDK  194 (272)
T ss_pred             ----CCCCCchHHHHHHHHHHHHHHHHHHhhhcC--eEEEEEecCcccCchhhh
Confidence                556778999999999999999999999999  999999999999998764

>PRK07370 enoyl-(acyl carrier protein) reductase; Validated

Probab=100.00  E-value=7e-36  Score=250.51  Aligned_cols=184  Identities=15%  Similarity=0.133  Sum_probs=159.7

Q ss_pred             CEEEEECCC--ChhHHHHHHHHHHcCCEEEEEecCch--hHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhc
Q 025509            1 MDIVITGAT--SGIGTETARVLALRGVHVVMGVRDIA--AGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQ   76 (251)
Q Consensus         1 k~vlItG~s--~gIG~a~a~~l~~~G~~Vi~~~r~~~--~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~   76 (251)
                      |++|||||+  +|||+++|++|+++|++|++++|+.+  +.++..+++.+..  ..+.++++|++|+++++++++++.++
T Consensus         7 k~~lItGas~~~GIG~aia~~la~~G~~v~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~Dl~d~~~v~~~~~~~~~~   84 (258)
T PRK07370          7 KKALVTGIANNRSIAWGIAQQLHAAGAELGITYLPDEKGRFEKKVRELTEPL--NPSLFLPCDVQDDAQIEETFETIKQK   84 (258)
T ss_pred             cEEEEeCCCCCCchHHHHHHHHHHCCCEEEEEecCcccchHHHHHHHHHhcc--CcceEeecCcCCHHHHHHHHHHHHHH
Confidence            689999986  89999999999999999998876543  3444555554432  34678899999999999999999999


Q ss_pred             CCCeeEEEEcCCCC------CCCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccC
Q 025509           77 HHQLNILINNAGIM------GTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHE  150 (251)
Q Consensus        77 ~g~id~lv~~ag~~------~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~  150 (251)
                      +|++|+||||||+.      .++.+.+.++|++.+++|+.+++.++++++|.|.+       .|+||++||..+..    
T Consensus        85 ~g~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~~~~m~~-------~g~Iv~isS~~~~~----  153 (258)
T PRK07370         85 WGKLDILVHCLAFAGKEELIGDFSATSREGFARALEISAYSLAPLCKAAKPLMSE-------GGSIVTLTYLGGVR----  153 (258)
T ss_pred             cCCCCEEEEcccccCcccccCcchhhCHHHHHHHheeeeHHHHHHHHHHHHHHhh-------CCeEEEEecccccc----
Confidence            99999999999975      23567788999999999999999999999999964       47999999987655    


Q ss_pred             CcccccCCCCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCccc
Q 025509          151 GIRFDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIR  210 (251)
Q Consensus       151 ~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~  210 (251)
                                 +.+.+..|++||+|+.+|+++|+.|++++|  |+||+|+||+++|++..
T Consensus       154 -----------~~~~~~~Y~asKaal~~l~~~la~el~~~g--I~Vn~i~PG~v~T~~~~  200 (258)
T PRK07370        154 -----------AIPNYNVMGVAKAALEASVRYLAAELGPKN--IRVNAISAGPIRTLASS  200 (258)
T ss_pred             -----------CCcccchhhHHHHHHHHHHHHHHHHhCcCC--eEEEEEecCcccCchhh
Confidence                       667888999999999999999999999999  99999999999999864

>PRK07533 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=2.6e-35  Score=247.08  Aligned_cols=184  Identities=16%  Similarity=0.198  Sum_probs=157.9

Q ss_pred             CEEEEECCC--ChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCC
Q 025509            1 MDIVITGAT--SGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHH   78 (251)
Q Consensus         1 k~vlItG~s--~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g   78 (251)
                      |++|||||+  +|||+++|++|+++|++|++++|+.+. .+..+++.+..  ..+.++++|+++.++++++++++.+++|
T Consensus        11 k~~lItGas~g~GIG~a~a~~la~~G~~v~l~~r~~~~-~~~~~~~~~~~--~~~~~~~~D~~~~~~v~~~~~~~~~~~g   87 (258)
T PRK07533         11 KRGLVVGIANEQSIAWGCARAFRALGAELAVTYLNDKA-RPYVEPLAEEL--DAPIFLPLDVREPGQLEAVFARIAEEWG   87 (258)
T ss_pred             CEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCChhh-HHHHHHHHHhh--ccceEEecCcCCHHHHHHHHHHHHHHcC
Confidence            689999998  599999999999999999999998643 22333343332  2356789999999999999999999999


Q ss_pred             CeeEEEEcCCCCC------CCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCc
Q 025509           79 QLNILINNAGIMG------TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGI  152 (251)
Q Consensus        79 ~id~lv~~ag~~~------~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~  152 (251)
                      ++|++|||||+..      ++.+.+.++|++++++|+.+++.+++.++|+|++       .|+||++||.++..      
T Consensus        88 ~ld~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~-------~g~Ii~iss~~~~~------  154 (258)
T PRK07533         88 RLDFLLHSIAFAPKEDLHGRVVDCSREGFALAMDVSCHSFIRMARLAEPLMTN-------GGSLLTMSYYGAEK------  154 (258)
T ss_pred             CCCEEEEcCccCCcccccCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHhcc-------CCEEEEEecccccc------
Confidence            9999999999742      3456788999999999999999999999999953       47999999977654      


Q ss_pred             ccccCCCCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccC
Q 025509          153 RFDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  211 (251)
Q Consensus       153 ~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  211 (251)
                               +.+.+..|+++|+|+.+|+++|+.|+.++|  |+||+|+||+++|++.+.
T Consensus       155 ---------~~~~~~~Y~asKaal~~l~~~la~el~~~g--I~Vn~v~PG~v~T~~~~~  202 (258)
T PRK07533        155 ---------VVENYNLMGPVKAALESSVRYLAAELGPKG--IRVHAISPGPLKTRAASG  202 (258)
T ss_pred             ---------CCccchhhHHHHHHHHHHHHHHHHHhhhcC--cEEEEEecCCcCChhhhc
Confidence                     566788999999999999999999999999  999999999999998754

>KOG0725 consensus Reductases with broad range of substrate specificities [General function prediction only]

Probab=100.00  E-value=3.7e-35  Score=246.31  Aligned_cols=186  Identities=31%  Similarity=0.359  Sum_probs=162.9

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCC-CCceEEEEecCCCHHHHHHHHHHHHhc-CC
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIP-SAKVDAMELDLSSLASVRNFASEYNIQ-HH   78 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~-~~~v~~~~~D~~~~~~i~~~~~~~~~~-~g   78 (251)
                      |++||||+++|||+++|++|++.|++|++++|+.+.+++...++..... +.++..+.||+++.++++++++...++ +|
T Consensus         9 kvalVTG~s~GIG~aia~~la~~Ga~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~l~~~~~~~~~G   88 (270)
T KOG0725|consen    9 KVALVTGGSSGIGKAIALLLAKAGAKVVITGRSEERLEETAQELGGLGYTGGKVLAIVCDVSKEVDVEKLVEFAVEKFFG   88 (270)
T ss_pred             cEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCeeEEEECcCCCHHHHHHHHHHHHHHhCC
Confidence            6899999999999999999999999999999999999888888766432 457999999999999999999998888 79


Q ss_pred             CeeEEEEcCCCCC---CCCcCCchhhHHHHHHHHHH-HHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCccc
Q 025509           79 QLNILINNAGIMG---TPFMLSKDNIELQFATNHLG-HFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRF  154 (251)
Q Consensus        79 ~id~lv~~ag~~~---~~~~~~~~~~~~~~~~n~~~-~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~  154 (251)
                      ++|+||||||...   +..+.++|+|++++++|+.| .+.+.+.+.+++.++     ++|.|+++||.++..        
T Consensus        89 kidiLvnnag~~~~~~~~~~~s~e~~d~~~~~Nl~G~~~~~~~~a~~~~~~~-----~gg~I~~~ss~~~~~--------  155 (270)
T KOG0725|consen   89 KIDILVNNAGALGLTGSILDLSEEVFDKIMATNLRGSAFCLKQAARPMLKKS-----KGGSIVNISSVAGVG--------  155 (270)
T ss_pred             CCCEEEEcCCcCCCCCChhhCCHHHHHHHHhhhchhHHHHHHHHHHHHHHhc-----CCceEEEEecccccc--------
Confidence            9999999999653   46789999999999999995 555666666666664     578999999987765        


Q ss_pred             ccCCCCCCCCcc-cccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCc
Q 025509          155 DKINDPSGYNGF-RAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNI  208 (251)
Q Consensus       155 ~~~~~~~~~~~~-~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~  208 (251)
                             +.... ..|+++|+|+++|+|++|.|+.++|  ||||+|+||.+.|++
T Consensus       156 -------~~~~~~~~Y~~sK~al~~ltr~lA~El~~~g--IRvN~v~PG~i~T~~  201 (270)
T KOG0725|consen  156 -------PGPGSGVAYGVSKAALLQLTRSLAKELAKHG--IRVNSVSPGLVKTSL  201 (270)
T ss_pred             -------CCCCCcccchhHHHHHHHHHHHHHHHHhhcC--cEEEEeecCcEeCCc
Confidence                   32333 6899999999999999999999999  999999999999998

>PRK08159 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=3.3e-35  Score=248.29  Aligned_cols=184  Identities=17%  Similarity=0.167  Sum_probs=158.1

Q ss_pred             CEEEEECCC--ChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCC
Q 025509            1 MDIVITGAT--SGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHH   78 (251)
Q Consensus         1 k~vlItG~s--~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g   78 (251)
                      |++|||||+  +|||+++|++|+++|++|++++|+. ...+..+++.++. + ...++++|++++++++++++++.+++|
T Consensus        11 k~~lItGas~~~GIG~aia~~la~~G~~V~l~~r~~-~~~~~~~~l~~~~-~-~~~~~~~Dl~~~~~v~~~~~~~~~~~g   87 (272)
T PRK08159         11 KRGLILGVANNRSIAWGIAKACRAAGAELAFTYQGD-ALKKRVEPLAAEL-G-AFVAGHCDVTDEASIDAVFETLEKKWG   87 (272)
T ss_pred             CEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCch-HHHHHHHHHHHhc-C-CceEEecCCCCHHHHHHHHHHHHHhcC
Confidence            689999997  8999999999999999999998863 3334444444443 2 356789999999999999999999999


Q ss_pred             CeeEEEEcCCCCC------CCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCc
Q 025509           79 QLNILINNAGIMG------TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGI  152 (251)
Q Consensus        79 ~id~lv~~ag~~~------~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~  152 (251)
                      ++|++|||||+..      ++.+.+.++|++.+++|+.+++.++++++|+|.+       +|+||++||.++..      
T Consensus        88 ~iD~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~-------~g~Iv~iss~~~~~------  154 (272)
T PRK08159         88 KLDFVVHAIGFSDKDELTGRYVDTSRDNFTMTMDISVYSFTAVAQRAEKLMTD-------GGSILTLTYYGAEK------  154 (272)
T ss_pred             CCcEEEECCcccCccccccCcccCCHHHHHHHHhHHHHHHHHHHHHHHHhcCC-------CceEEEEecccccc------
Confidence            9999999999753      3457788999999999999999999999999853       48999999976554      


Q ss_pred             ccccCCCCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccC
Q 025509          153 RFDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  211 (251)
Q Consensus       153 ~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  211 (251)
                               +.+.+..|++||+|+.+|+++|+.|+.++|  |+||+|+||+++|++...
T Consensus       155 ---------~~p~~~~Y~asKaal~~l~~~la~el~~~g--IrVn~v~PG~v~T~~~~~  202 (272)
T PRK08159        155 ---------VMPHYNVMGVAKAALEASVKYLAVDLGPKN--IRVNAISAGPIKTLAASG  202 (272)
T ss_pred             ---------CCCcchhhhhHHHHHHHHHHHHHHHhcccC--eEEEEeecCCcCCHHHhc
Confidence                     567888999999999999999999999999  999999999999987653

>PRK05599 hypothetical protein; Provisional

Probab=100.00  E-value=2.1e-35  Score=246.00  Aligned_cols=188  Identities=18%  Similarity=0.239  Sum_probs=165.2

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      |++|||||++|||+++|++|+ +|++|++++|+.++++++.+++.+.. +..+.++++|++|+++++++++++.+.+|++
T Consensus         1 ~~vlItGas~GIG~aia~~l~-~g~~Vil~~r~~~~~~~~~~~l~~~~-~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i   78 (246)
T PRK05599          1 MSILILGGTSDIAGEIATLLC-HGEDVVLAARRPEAAQGLASDLRQRG-ATSVHVLSFDAQDLDTHRELVKQTQELAGEI   78 (246)
T ss_pred             CeEEEEeCccHHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHHHHhcc-CCceEEEEcccCCHHHHHHHHHHHHHhcCCC
Confidence            689999999999999999999 59999999999999988888886542 2357889999999999999999999889999


Q ss_pred             eEEEEcCCCCCC--CCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccccCC
Q 025509           81 NILINNAGIMGT--PFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKIN  158 (251)
Q Consensus        81 d~lv~~ag~~~~--~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~  158 (251)
                      |++|||||...+  ..+.+.+++.+++++|+.+++.+++.++|.|.++.    ..|+||++||.++..            
T Consensus        79 d~lv~nag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~----~~g~Iv~isS~~~~~------------  142 (246)
T PRK05599         79 SLAVVAFGILGDQERAETDEAHAVEIATVDYTAQVSMLTVLADELRAQT----APAAIVAFSSIAGWR------------  142 (246)
T ss_pred             CEEEEecCcCCCchhhhcCcHHHHHHHHHHHHhHHHHHHHHHHHHHhcC----CCCEEEEEecccccc------------
Confidence            999999997643  33556677888999999999999999999997641    258999999988765            


Q ss_pred             CCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccC
Q 025509          159 DPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  211 (251)
Q Consensus       159 ~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  211 (251)
                         +.+++..|+++|+|+++|+++|+.|+.++|  |+||+|+||+++|++...
T Consensus       143 ---~~~~~~~Y~asKaa~~~~~~~la~el~~~~--I~v~~v~PG~v~T~~~~~  190 (246)
T PRK05599        143 ---ARRANYVYGSTKAGLDAFCQGLADSLHGSH--VRLIIARPGFVIGSMTTG  190 (246)
T ss_pred             ---CCcCCcchhhHHHHHHHHHHHHHHHhcCCC--ceEEEecCCcccchhhcC
Confidence               566788999999999999999999999888  999999999999998654

>PRK05867 short chain dehydrogenase; Provisional

Probab=100.00  E-value=4.1e-35  Score=244.94  Aligned_cols=189  Identities=26%  Similarity=0.334  Sum_probs=165.5

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      |++|||||++|||.+++++|+++|++|++++|+.+++++..+++.+.  +.++.++.+|++++++++++++++.+.++++
T Consensus        10 k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i   87 (253)
T PRK05867         10 KRALITGASTGIGKRVALAYVEAGAQVAIAARHLDALEKLADEIGTS--GGKVVPVCCDVSQHQQVTSMLDQVTAELGGI   87 (253)
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhc--CCeEEEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence            68999999999999999999999999999999988888887777554  4568889999999999999999999999999


Q ss_pred             eEEEEcCCCCC--CCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccccCC
Q 025509           81 NILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKIN  158 (251)
Q Consensus        81 d~lv~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~  158 (251)
                      |+||||||...  ++.+.+.++|++.+++|+.+++.++++++|+|.++.    ..++||++||.++...           
T Consensus        88 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~----~~g~iv~~sS~~~~~~-----------  152 (253)
T PRK05867         88 DIAVCNAGIITVTPMLDMPLEEFQRLQNTNVTGVFLTAQAAAKAMVKQG----QGGVIINTASMSGHII-----------  152 (253)
T ss_pred             CEEEECCCCCCCCChhhCCHHHHHHHHHhcchhHHHHHHHHHHHHHhcC----CCcEEEEECcHHhcCC-----------
Confidence            99999999753  355678899999999999999999999999998751    2579999999776431           


Q ss_pred             CCCCCC-cccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccC
Q 025509          159 DPSGYN-GFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  211 (251)
Q Consensus       159 ~~~~~~-~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  211 (251)
                         ..+ .+..|+++|+|+++|++++++|+.++|  |+||+|+||+++|++...
T Consensus       153 ---~~~~~~~~Y~asKaal~~~~~~la~e~~~~g--I~vn~i~PG~v~t~~~~~  201 (253)
T PRK05867        153 ---NVPQQVSHYCASKAAVIHLTKAMAVELAPHK--IRVNSVSPGYILTELVEP  201 (253)
T ss_pred             ---CCCCCccchHHHHHHHHHHHHHHHHHHhHhC--eEEEEeecCCCCCccccc
Confidence               112 356899999999999999999999999  999999999999998764

>KOG1208 consensus Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport and catabolism]

Probab=100.00  E-value=3.4e-35  Score=250.18  Aligned_cols=226  Identities=47%  Similarity=0.645  Sum_probs=190.2

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      ++++|||+++|||+++|++|+++|++|++++|+.++.+++++++.+..+...+.++++|+++.+++.++.++....++++
T Consensus        36 ~~~vVTGansGIG~eta~~La~~Ga~Vv~~~R~~~~~~~~~~~i~~~~~~~~i~~~~lDLssl~SV~~fa~~~~~~~~~l  115 (314)
T KOG1208|consen   36 KVALVTGATSGIGFETARELALRGAHVVLACRNEERGEEAKEQIQKGKANQKIRVIQLDLSSLKSVRKFAEEFKKKEGPL  115 (314)
T ss_pred             cEEEEECCCCchHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCHHHHHHHHHHHHhcCCCc
Confidence            58999999999999999999999999999999999999999999987778889999999999999999999999999999


Q ss_pred             eEEEEcCCCCCCCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccccCCCC
Q 025509           81 NILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDP  160 (251)
Q Consensus        81 d~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~  160 (251)
                      |++|||||++.++...+.|.+|..|.+|++|++.+++.++|.|+..     ..+|||++||..+    .....+++++.+
T Consensus       116 dvLInNAGV~~~~~~~t~DG~E~~~~tN~lg~flLt~lLlp~lk~s-----~~~RIV~vsS~~~----~~~~~~~~l~~~  186 (314)
T KOG1208|consen  116 DVLINNAGVMAPPFSLTKDGLELTFATNYLGHFLLTELLLPLLKRS-----APSRIVNVSSILG----GGKIDLKDLSGE  186 (314)
T ss_pred             cEEEeCcccccCCcccCccchhheehhhhHHHHHHHHHHHHHHhhC-----CCCCEEEEcCccc----cCccchhhccch
Confidence            9999999998877788889999999999999999999999999985     3489999999876    222344445544


Q ss_pred             CC--CCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCCcchhhhhhhhhhhhhHhhhccccChH
Q 025509          161 SG--YNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRHNSLFRSMNTILHALPGIAGKCLLKNVQ  238 (251)
Q Consensus       161 ~~--~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (251)
                      ..  ......|+.||.|+..+++.|++.+.+ |  |.++.++||.+.|+......  ..    .......+...+.++++
T Consensus       187 ~~~~~~~~~~Y~~SKla~~l~~~eL~k~l~~-~--V~~~~~hPG~v~t~~l~r~~--~~----~~~l~~~l~~~~~ks~~  257 (314)
T KOG1208|consen  187 KAKLYSSDAAYALSKLANVLLANELAKRLKK-G--VTTYSVHPGVVKTTGLSRVN--LL----LRLLAKKLSWPLTKSPE  257 (314)
T ss_pred             hccCccchhHHHHhHHHHHHHHHHHHHHhhc-C--ceEEEECCCcccccceecch--HH----HHHHHHHHHHHhccCHH
Confidence            33  444457999999999999999999987 7  99999999999999444311  11    12244444555558888


Q ss_pred             HHHHHH
Q 025509          239 QVILNF  244 (251)
Q Consensus       239 ~~~~~~  244 (251)
                      .|+...
T Consensus       258 ~ga~t~  263 (314)
T KOG1208|consen  258 QGAATT  263 (314)
T ss_pred             HHhhhe
Confidence            888763

>PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional

Probab=100.00  E-value=6e-35  Score=244.99  Aligned_cols=188  Identities=22%  Similarity=0.319  Sum_probs=163.6

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEec-CchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCC
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVR-DIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQ   79 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r-~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~   79 (251)
                      |++|||||++|||+++|++|+++|++|++++| +++.++...+++.... +.++.++++|++++++++++++++.+.+++
T Consensus         9 k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   87 (260)
T PRK08416          9 KTLVISGGTRGIGKAIVYEFAQSGVNIAFTYNSNVEEANKIAEDLEQKY-GIKAKAYPLNILEPETYKELFKKIDEDFDR   87 (260)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHHhc-CCceEEEEcCCCCHHHHHHHHHHHHHhcCC
Confidence            68999999999999999999999999998875 5556666666665432 457899999999999999999999999999


Q ss_pred             eeEEEEcCCCCC--------CCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCC
Q 025509           80 LNILINNAGIMG--------TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEG  151 (251)
Q Consensus        80 id~lv~~ag~~~--------~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~  151 (251)
                      +|+||||||...        ++.+.+.++++..+++|+.+++.+++.++|.|+++     +.|+||++||..+..     
T Consensus        88 id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-----~~g~iv~isS~~~~~-----  157 (260)
T PRK08416         88 VDFFISNAIISGRAVVGGYTKFMRLKPKGLNNIYTATVNAFVVGAQEAAKRMEKV-----GGGSIISLSSTGNLV-----  157 (260)
T ss_pred             ccEEEECccccccccccccCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHhhhcc-----CCEEEEEEecccccc-----
Confidence            999999998642        34466788999999999999999999999999874     468999999987654     


Q ss_pred             cccccCCCCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccC
Q 025509          152 IRFDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  211 (251)
Q Consensus       152 ~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  211 (251)
                                +.+.+..|++||+|+++|+++|+.|+.++|  |+||+|+||+++|++...
T Consensus       158 ----------~~~~~~~Y~asK~a~~~~~~~la~el~~~g--i~v~~v~PG~i~T~~~~~  205 (260)
T PRK08416        158 ----------YIENYAGHGTSKAAVETMVKYAATELGEKN--IRVNAVSGGPIDTDALKA  205 (260)
T ss_pred             ----------CCCCcccchhhHHHHHHHHHHHHHHhhhhC--eEEEEEeeCcccChhhhh
Confidence                      567788999999999999999999999999  999999999999998664

>PRK08303 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.9e-35  Score=252.27  Aligned_cols=189  Identities=20%  Similarity=0.228  Sum_probs=159.8

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCc----------hhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHH
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDI----------AAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFA   70 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~----------~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~   70 (251)
                      |++|||||++|||+++|++|+++|++|++++|+.          +.+++..+.+...  +..+.++++|+++++++++++
T Consensus         9 k~~lITGgs~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~Dv~~~~~v~~~~   86 (305)
T PRK08303          9 KVALVAGATRGAGRGIAVELGAAGATVYVTGRSTRARRSEYDRPETIEETAELVTAA--GGRGIAVQVDHLVPEQVRALV   86 (305)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEecccccccccccccchHHHHHHHHHhc--CCceEEEEcCCCCHHHHHHHH
Confidence            6899999999999999999999999999999974          3455555555432  456788999999999999999


Q ss_pred             HHHHhcCCCeeEEEEcC-CCC------CCCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCcc
Q 025509           71 SEYNIQHHQLNILINNA-GIM------GTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEG  143 (251)
Q Consensus        71 ~~~~~~~g~id~lv~~a-g~~------~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~  143 (251)
                      +++.+++|++|++|||| |..      .++.+.+.++|++++++|+.+++.++++++|+|.++     +.|+||++||..
T Consensus        87 ~~~~~~~g~iDilVnnA~g~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~lp~m~~~-----~~g~IV~isS~~  161 (305)
T PRK08303         87 ERIDREQGRLDILVNDIWGGEKLFEWGKPVWEHSLDKGLRMLRLAIDTHLITSHFALPLLIRR-----PGGLVVEITDGT  161 (305)
T ss_pred             HHHHHHcCCccEEEECCcccccccccCCchhhcCHHHHHHHHHHhhHHHHHHHHHHHHHhhhC-----CCcEEEEECCcc
Confidence            99999999999999999 742      234567788999999999999999999999999764     468999999965


Q ss_pred             ccccccCCcccccCCCCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCccc
Q 025509          144 HRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIR  210 (251)
Q Consensus       144 ~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~  210 (251)
                      +...            ..+.+....|++||+|+.+|+++|+.|+++.|  |+||+|+||+++|++..
T Consensus       162 ~~~~------------~~~~~~~~~Y~asKaal~~lt~~La~el~~~g--IrVn~v~PG~v~T~~~~  214 (305)
T PRK08303        162 AEYN------------ATHYRLSVFYDLAKTSVNRLAFSLAHELAPHG--ATAVALTPGWLRSEMML  214 (305)
T ss_pred             cccc------------CcCCCCcchhHHHHHHHHHHHHHHHHHhhhcC--cEEEEecCCccccHHHH
Confidence            4321            01233466899999999999999999999999  99999999999999854

>PRK06139 short chain dehydrogenase; Provisional

Probab=100.00  E-value=4.2e-35  Score=253.68  Aligned_cols=187  Identities=29%  Similarity=0.310  Sum_probs=168.9

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      |++|||||++|||+++|++|+++|++|++++|+++++++..+++.+.  +.++.++.+|++|.++++++++++.+.+|++
T Consensus         8 k~vlITGAs~GIG~aia~~la~~G~~Vvl~~R~~~~l~~~~~~~~~~--g~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i   85 (330)
T PRK06139          8 AVVVITGASSGIGQATAEAFARRGARLVLAARDEEALQAVAEECRAL--GAEVLVVPTDVTDADQVKALATQAASFGGRI   85 (330)
T ss_pred             CEEEEcCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc--CCcEEEEEeeCCCHHHHHHHHHHHHHhcCCC
Confidence            58999999999999999999999999999999999988888877653  5678889999999999999999999888999


Q ss_pred             eEEEEcCCCCC--CCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccccCC
Q 025509           81 NILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKIN  158 (251)
Q Consensus        81 d~lv~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~  158 (251)
                      |++|||||+..  ++.+.+.+++++.+++|+.+++.++++++|+|+++     ..|+||++||..+..            
T Consensus        86 D~lVnnAG~~~~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~~~~~-----~~g~iV~isS~~~~~------------  148 (330)
T PRK06139         86 DVWVNNVGVGAVGRFEETPIEAHEQVIQTNLIGYMRDAHAALPIFKKQ-----GHGIFINMISLGGFA------------  148 (330)
T ss_pred             CEEEECCCcCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHHc-----CCCEEEEEcChhhcC------------
Confidence            99999999753  36677889999999999999999999999999885     468999999988765            


Q ss_pred             CCCCCCcccccchhHHHHHHHHHHHHHHhccC-CCcEEEEEeeCCcccCCcccC
Q 025509          159 DPSGYNGFRAYSQSKLANILHANELARRLKED-GVDITANSVHPGAIATNIIRH  211 (251)
Q Consensus       159 ~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~-g~~i~v~~v~Pg~v~t~~~~~  211 (251)
                         +.+.+..|++||+|+.+|+++|+.|+.+. |  |+|+.|+||+++|++.+.
T Consensus       149 ---~~p~~~~Y~asKaal~~~~~sL~~El~~~~g--I~V~~v~Pg~v~T~~~~~  197 (330)
T PRK06139        149 ---AQPYAAAYSASKFGLRGFSEALRGELADHPD--IHVCDVYPAFMDTPGFRH  197 (330)
T ss_pred             ---CCCCchhHHHHHHHHHHHHHHHHHHhCCCCC--eEEEEEecCCccCccccc
Confidence               66778899999999999999999999874 7  999999999999998753

>PRK07984 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=2.1e-35  Score=248.07  Aligned_cols=183  Identities=13%  Similarity=0.200  Sum_probs=157.8

Q ss_pred             CEEEEECCCC--hhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCC
Q 025509            1 MDIVITGATS--GIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHH   78 (251)
Q Consensus         1 k~vlItG~s~--gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g   78 (251)
                      |++|||||++  |||+++|++|+++|++|++++|+ +++++..+++....  ..+.++.+|++|+++++++++++.+++|
T Consensus         7 k~~lITGas~~~GIG~aia~~la~~G~~vil~~r~-~~~~~~~~~~~~~~--~~~~~~~~Dl~~~~~v~~~~~~~~~~~g   83 (262)
T PRK07984          7 KRILVTGVASKLSIAYGIAQAMHREGAELAFTYQN-DKLKGRVEEFAAQL--GSDIVLPCDVAEDASIDAMFAELGKVWP   83 (262)
T ss_pred             CEEEEeCCCCCccHHHHHHHHHHHCCCEEEEEecc-hhHHHHHHHHHhcc--CCceEeecCCCCHHHHHHHHHHHHhhcC
Confidence            6899999986  99999999999999999999987 35555566665543  2467789999999999999999999999


Q ss_pred             CeeEEEEcCCCCCC-------CCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCC
Q 025509           79 QLNILINNAGIMGT-------PFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEG  151 (251)
Q Consensus        79 ~id~lv~~ag~~~~-------~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~  151 (251)
                      ++|++|||||+...       +.+.+.++|+..+++|+.+++.+++++.|.+.+       +|+||++||.++..     
T Consensus        84 ~iD~linnAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~-------~g~Iv~iss~~~~~-----  151 (262)
T PRK07984         84 KFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNP-------GSALLTLSYLGAER-----  151 (262)
T ss_pred             CCCEEEECCccCCccccCCcchhhcCHHHHHHHhhhhhHHHHHHHHHHHHHhcC-------CcEEEEEecCCCCC-----
Confidence            99999999997532       335678899999999999999999999886632       47999999977654     


Q ss_pred             cccccCCCCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCccc
Q 025509          152 IRFDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIR  210 (251)
Q Consensus       152 ~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~  210 (251)
                                +.+.+..|++||+|+++|+++++.|++++|  |+||+|+||+++|++..
T Consensus       152 ----------~~~~~~~Y~asKaal~~l~~~la~el~~~g--IrVn~i~PG~v~T~~~~  198 (262)
T PRK07984        152 ----------AIPNYNVMGLAKASLEANVRYMANAMGPEG--VRVNAISAGPIRTLAAS  198 (262)
T ss_pred             ----------CCCCcchhHHHHHHHHHHHHHHHHHhcccC--cEEeeeecCcccchHHh
Confidence                      667788999999999999999999999999  99999999999998754

>PRK06997 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=8.9e-35  Score=244.11  Aligned_cols=183  Identities=18%  Similarity=0.174  Sum_probs=154.3

Q ss_pred             CEEEEECC--CChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCC
Q 025509            1 MDIVITGA--TSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHH   78 (251)
Q Consensus         1 k~vlItG~--s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g   78 (251)
                      |++|||||  ++|||+++|++|+++|++|++++|.. +..+..+++.+..+  ...++++|++|+++++++++++.+++|
T Consensus         7 k~vlItGas~~~GIG~a~a~~l~~~G~~v~~~~~~~-~~~~~~~~~~~~~~--~~~~~~~Dv~d~~~v~~~~~~~~~~~g   83 (260)
T PRK06997          7 KRILITGLLSNRSIAYGIAKACKREGAELAFTYVGD-RFKDRITEFAAEFG--SDLVFPCDVASDEQIDALFASLGQHWD   83 (260)
T ss_pred             cEEEEeCCCCCCcHHHHHHHHHHHCCCeEEEEccch-HHHHHHHHHHHhcC--CcceeeccCCCHHHHHHHHHHHHHHhC
Confidence            68999996  68999999999999999999987652 22333334444332  234689999999999999999999999


Q ss_pred             CeeEEEEcCCCCCC-------CCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCC
Q 025509           79 QLNILINNAGIMGT-------PFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEG  151 (251)
Q Consensus        79 ~id~lv~~ag~~~~-------~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~  151 (251)
                      ++|++|||||+..+       ..+.+.++|+..+++|+.+++.++++++|+|.+       .|+||++||.++..     
T Consensus        84 ~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~lp~m~~-------~g~Ii~iss~~~~~-----  151 (260)
T PRK06997         84 GLDGLVHSIGFAPREAIAGDFLDGLSRENFRIAHDISAYSFPALAKAALPMLSD-------DASLLTLSYLGAER-----  151 (260)
T ss_pred             CCcEEEEccccCCccccccccchhcCHHHHHHHHHhhhHHHHHHHHHHHHhcCC-------CceEEEEecccccc-----
Confidence            99999999997532       234678899999999999999999999999942       47999999987654     


Q ss_pred             cccccCCCCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCccc
Q 025509          152 IRFDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIR  210 (251)
Q Consensus       152 ~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~  210 (251)
                                +.+.+..|++||+|+.+|+++|+.|++++|  |+||+|+||+++|++..
T Consensus       152 ----------~~~~~~~Y~asKaal~~l~~~la~el~~~g--IrVn~i~PG~v~T~~~~  198 (260)
T PRK06997        152 ----------VVPNYNTMGLAKASLEASVRYLAVSLGPKG--IRANGISAGPIKTLAAS  198 (260)
T ss_pred             ----------CCCCcchHHHHHHHHHHHHHHHHHHhcccC--eEEEEEeeCccccchhc
Confidence                      567778999999999999999999999999  99999999999998754

>PRK05876 short chain dehydrogenase; Provisional

Probab=100.00  E-value=7.7e-35  Score=246.41  Aligned_cols=188  Identities=24%  Similarity=0.328  Sum_probs=168.4

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      |++|||||++|||+++|++|+++|++|++++|+...+++..+++...  +.++.++.+|+++.+++.++++++.+.+|++
T Consensus         7 k~vlVTGas~gIG~ala~~La~~G~~Vv~~~r~~~~l~~~~~~l~~~--~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i   84 (275)
T PRK05876          7 RGAVITGGASGIGLATGTEFARRGARVVLGDVDKPGLRQAVNHLRAE--GFDVHGVMCDVRHREEVTHLADEAFRLLGHV   84 (275)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCeEEEEeCCCCCHHHHHHHHHHHHHHcCCC
Confidence            57999999999999999999999999999999988888877777543  4568889999999999999999999999999


Q ss_pred             eEEEEcCCCCC--CCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccccCC
Q 025509           81 NILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKIN  158 (251)
Q Consensus        81 d~lv~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~  158 (251)
                      |+||||||+..  ++.+.+.++|++.+++|+.+++.++++++|.|.+++    ..|+||++||.++..            
T Consensus        85 d~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~p~m~~~~----~~g~iv~isS~~~~~------------  148 (275)
T PRK05876         85 DVVFSNAGIVVGGPIVEMTHDDWRWVIDVDLWGSIHTVEAFLPRLLEQG----TGGHVVFTASFAGLV------------  148 (275)
T ss_pred             CEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcC----CCCEEEEeCChhhcc------------
Confidence            99999999753  466788899999999999999999999999998751    258999999988776            


Q ss_pred             CCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccC
Q 025509          159 DPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  211 (251)
Q Consensus       159 ~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  211 (251)
                         +.++...|+++|+++.+|+++|+.|+.+.|  |+|++|+||+++|++...
T Consensus       149 ---~~~~~~~Y~asK~a~~~~~~~l~~e~~~~g--i~v~~v~Pg~v~t~~~~~  196 (275)
T PRK05876        149 ---PNAGLGAYGVAKYGVVGLAETLAREVTADG--IGVSVLCPMVVETNLVAN  196 (275)
T ss_pred             ---CCCCCchHHHHHHHHHHHHHHHHHHhhhcC--cEEEEEEeCccccccccc
Confidence               677888999999999999999999999888  999999999999998653

>PRK07791 short chain dehydrogenase; Provisional

Probab=100.00  E-value=6.4e-35  Score=248.21  Aligned_cols=190  Identities=25%  Similarity=0.310  Sum_probs=165.1

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCc---------hhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHH
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDI---------AAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFAS   71 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~---------~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~   71 (251)
                      |++|||||++|||+++|++|++.|++|++++|+.         +.+++..+++.+.  +.++.++.+|+++.+++.++++
T Consensus         7 k~~lITGas~GIG~aia~~la~~G~~vii~~~~~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~Dv~~~~~v~~~~~   84 (286)
T PRK07791          7 RVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSASGGSAAQAVVDEIVAA--GGEAVANGDDIADWDGAANLVD   84 (286)
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCCEEEEeeCCccccccccchhHHHHHHHHHHhc--CCceEEEeCCCCCHHHHHHHHH
Confidence            6899999999999999999999999999998875         5566666666543  4568889999999999999999


Q ss_pred             HHHhcCCCeeEEEEcCCCCC--CCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhcc-CCCCceEEEEcCccccccc
Q 025509           72 EYNIQHHQLNILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARK-SGGEGRIINVSSEGHRLAY  148 (251)
Q Consensus        72 ~~~~~~g~id~lv~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~-~~~~g~iv~vsS~~~~~~~  148 (251)
                      ++.+.+|++|+||||||+..  ++.+.+.++|++.+++|+.+++.++++++|+|+++.+. ....|+||++||.++..  
T Consensus        85 ~~~~~~g~id~lv~nAG~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~Iv~isS~~~~~--  162 (286)
T PRK07791         85 AAVETFGGLDVLVNNAGILRDRMIANMSEEEWDAVIAVHLKGHFATLRHAAAYWRAESKAGRAVDARIINTSSGAGLQ--  162 (286)
T ss_pred             HHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHHhcccCCCCCcEEEEeCchhhCc--
Confidence            99999999999999999754  35678889999999999999999999999999864221 11247999999988766  


Q ss_pred             cCCcccccCCCCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCccc
Q 025509          149 HEGIRFDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIR  210 (251)
Q Consensus       149 ~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~  210 (251)
                                   +.+++..|+++|+|+++|+++|+.|+.++|  |+||+|+|| +.|++..
T Consensus       163 -------------~~~~~~~Y~asKaal~~l~~~la~el~~~g--IrVn~v~Pg-~~T~~~~  208 (286)
T PRK07791        163 -------------GSVGQGNYSAAKAGIAALTLVAAAELGRYG--VTVNAIAPA-ARTRMTE  208 (286)
T ss_pred             -------------CCCCchhhHHHHHHHHHHHHHHHHHHHHhC--eEEEEECCC-CCCCcch
Confidence                         677888999999999999999999999999  999999999 8998864

>PRK08862 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.2e-34  Score=238.68  Aligned_cols=182  Identities=21%  Similarity=0.177  Sum_probs=161.4

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCC-C
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHH-Q   79 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g-~   79 (251)
                      |+++||||++|||+++|++|+++|++|++++|+++++++..+++.+.  +..+..+.+|++++++++++++++.++++ +
T Consensus         6 k~~lVtGas~GIG~aia~~la~~G~~V~~~~r~~~~l~~~~~~i~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~   83 (227)
T PRK08862          6 SIILITSAGSVLGRTISCHFARLGATLILCDQDQSALKDTYEQCSAL--TDNVYSFQLKDFSQESIRHLFDAIEQQFNRA   83 (227)
T ss_pred             eEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhc--CCCeEEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence            58999999999999999999999999999999999888888777654  45678899999999999999999999988 9


Q ss_pred             eeEEEEcCCCC---CCCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCccccc
Q 025509           80 LNILINNAGIM---GTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDK  156 (251)
Q Consensus        80 id~lv~~ag~~---~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~  156 (251)
                      +|++|||||..   .++.+.++++|.+.+++|+.+++.+++.++|+|.+++    .+|+||++||..             
T Consensus        84 iD~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~m~~~~----~~g~Iv~isS~~-------------  146 (227)
T PRK08862         84 PDVLVNNWTSSPLPSLFDEQPSESFIQQLSSLASTLFTYGQVAAERMRKRN----KKGVIVNVISHD-------------  146 (227)
T ss_pred             CCEEEECCccCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC----CCceEEEEecCC-------------
Confidence            99999999853   2356778889999999999999999999999998752    258999999954             


Q ss_pred             CCCCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCc
Q 025509          157 INDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNI  208 (251)
Q Consensus       157 ~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~  208 (251)
                           +.+.+..|+++|+|+.+|+++|+.|+.++|  |+||+|+||++.|+.
T Consensus       147 -----~~~~~~~Y~asKaal~~~~~~la~el~~~~--Irvn~v~PG~i~t~~  191 (227)
T PRK08862        147 -----DHQDLTGVESSNALVSGFTHSWAKELTPFN--IRVGGVVPSIFSANG  191 (227)
T ss_pred             -----CCCCcchhHHHHHHHHHHHHHHHHHHhhcC--cEEEEEecCcCcCCC
Confidence                 234567899999999999999999999999  999999999999994

>PRK06197 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.4e-34  Score=246.83  Aligned_cols=205  Identities=46%  Similarity=0.664  Sum_probs=172.4

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      |++|||||++|||+++|++|+++|++|++++|+.++.++..+++.+..++..+.++.+|+++.++++++++++.++++++
T Consensus        17 k~vlItGas~gIG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~~~i   96 (306)
T PRK06197         17 RVAVVTGANTGLGYETAAALAAKGAHVVLAVRNLDKGKAAAARITAATPGADVTLQELDLTSLASVRAAADALRAAYPRI   96 (306)
T ss_pred             CEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEECCCCCHHHHHHHHHHHHhhCCCC
Confidence            58999999999999999999999999999999988888877777665555678899999999999999999999999999


Q ss_pred             eEEEEcCCCCCCCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccccCCCC
Q 025509           81 NILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDP  160 (251)
Q Consensus        81 d~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~  160 (251)
                      |+||||||...+....+.++++..+++|+.+++.+++.++|.+++.     +.++||++||.++....  ...+++...+
T Consensus        97 D~li~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~-----~~~~iV~vSS~~~~~~~--~~~~~~~~~~  169 (306)
T PRK06197         97 DLLINNAGVMYTPKQTTADGFELQFGTNHLGHFALTGLLLDRLLPV-----PGSRVVTVSSGGHRIRA--AIHFDDLQWE  169 (306)
T ss_pred             CEEEECCccccCCCccCCCCcchhhhhhhHHHHHHHHHHHHHHhhC-----CCCEEEEECCHHHhccC--CCCccccCcc
Confidence            9999999976555556778899999999999999999999999875     45799999998654311  1233333333


Q ss_pred             CCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCC
Q 025509          161 SGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRHN  212 (251)
Q Consensus       161 ~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~~  212 (251)
                      .+.++...|+.||+|+++|++.+++++.+.|.+|.+++++||+|.|++.+..
T Consensus       170 ~~~~~~~~Y~~SK~a~~~~~~~la~~l~~~~i~v~~v~~~PG~v~T~~~~~~  221 (306)
T PRK06197        170 RRYNRVAAYGQSKLANLLFTYELQRRLAAAGATTIAVAAHPGVSNTELARNL  221 (306)
T ss_pred             cCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCeEEEEeCCCcccCcccccC
Confidence            4556678999999999999999999999888555556668999999998754

>PLN02730 enoyl-[acyl-carrier-protein] reductase

Probab=100.00  E-value=4.8e-35  Score=249.60  Aligned_cols=186  Identities=16%  Similarity=0.183  Sum_probs=158.3

Q ss_pred             CEEEEECC--CChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhh-------CCC----CceEEEEecC--CC---
Q 025509            1 MDIVITGA--TSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKE-------IPS----AKVDAMELDL--SS---   62 (251)
Q Consensus         1 k~vlItG~--s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~-------~~~----~~v~~~~~D~--~~---   62 (251)
                      |++|||||  |+|||+++|+.|+++|++|++ +|+.++++.+...+.+.       .+.    ....++.+|+  ++   
T Consensus        10 k~alITGa~~s~GIG~a~A~~la~~Ga~Vv~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~   88 (303)
T PLN02730         10 KRAFIAGVADDNGYGWAIAKALAAAGAEILV-GTWVPALNIFETSLRRGKFDESRKLPDGSLMEITKVYPLDAVFDTPED   88 (303)
T ss_pred             CEEEEeCCCCCCcHHHHHHHHHHHCCCEEEE-EeCcchhhHHHHhhhccccchhhhcccccccCcCeeeecceecCcccc
Confidence            68999999  899999999999999999999 78888888877666431       111    1246788898  33   


Q ss_pred             ---------------HHHHHHHHHHHHhcCCCeeEEEEcCCCC----CCCCcCCchhhHHHHHHHHHHHHHHHHHHHHHH
Q 025509           63 ---------------LASVRNFASEYNIQHHQLNILINNAGIM----GTPFMLSKDNIELQFATNHLGHFLLTNLLLDTM  123 (251)
Q Consensus        63 ---------------~~~i~~~~~~~~~~~g~id~lv~~ag~~----~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~  123 (251)
                                     .++++++++++.+++|++|+||||||..    .++.+.+.++|++++++|+.+++.++++++|+|
T Consensus        89 ~~~~~~~~~~~~~~~~~~v~~l~~~i~~~~G~iDiLVnNAG~~~~~~~~~~~~~~e~~~~~~~vN~~~~~~l~~~~~p~m  168 (303)
T PLN02730         89 VPEDVKTNKRYAGSSNWTVQEVAESVKADFGSIDILVHSLANGPEVTKPLLETSRKGYLAAISASSYSFVSLLQHFGPIM  168 (303)
T ss_pred             CchhhhcccccccCCHHHHHHHHHHHHHHcCCCCEEEECCCccccCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHH
Confidence                           4489999999999999999999999753    356778999999999999999999999999999


Q ss_pred             HHhhccCCCCceEEEEcCccccccccCCcccccCCCCCCCCcc-cccchhHHHHHHHHHHHHHHhcc-CCCcEEEEEeeC
Q 025509          124 KKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGF-RAYSQSKLANILHANELARRLKE-DGVDITANSVHP  201 (251)
Q Consensus       124 ~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~-~~Y~~sK~a~~~~~~~la~e~~~-~g~~i~v~~v~P  201 (251)
                      ++       .|+||++||..+..               +.+.+ ..|++||+|+.+|+++|+.|+++ +|  |+||+|+|
T Consensus       169 ~~-------~G~II~isS~a~~~---------------~~p~~~~~Y~asKaAl~~l~~~la~El~~~~g--IrVn~V~P  224 (303)
T PLN02730        169 NP-------GGASISLTYIASER---------------IIPGYGGGMSSAKAALESDTRVLAFEAGRKYK--IRVNTISA  224 (303)
T ss_pred             hc-------CCEEEEEechhhcC---------------CCCCCchhhHHHHHHHHHHHHHHHHHhCcCCC--eEEEEEee
Confidence            65       38999999987765               45544 47999999999999999999986 78  99999999


Q ss_pred             CcccCCcccC
Q 025509          202 GAIATNIIRH  211 (251)
Q Consensus       202 g~v~t~~~~~  211 (251)
                      |+++|+|...
T Consensus       225 G~v~T~~~~~  234 (303)
T PLN02730        225 GPLGSRAAKA  234 (303)
T ss_pred             CCccCchhhc
Confidence            9999999764

>PRK07889 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=7e-35  Score=244.19  Aligned_cols=181  Identities=20%  Similarity=0.256  Sum_probs=154.4

Q ss_pred             CEEEEECC--CChhHHHHHHHHHHcCCEEEEEecCc--hhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhc
Q 025509            1 MDIVITGA--TSGIGTETARVLALRGVHVVMGVRDI--AAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQ   76 (251)
Q Consensus         1 k~vlItG~--s~gIG~a~a~~l~~~G~~Vi~~~r~~--~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~   76 (251)
                      |+++||||  ++|||+++|++|+++|++|++++|+.  +..+++    .+.. +..+.++++|++++++++++++++.+.
T Consensus         8 k~~lItGa~~s~GIG~a~a~~la~~G~~v~l~~r~~~~~~~~~~----~~~~-~~~~~~~~~Dv~~~~~i~~~~~~~~~~   82 (256)
T PRK07889          8 KRILVTGVITDSSIAFHVARVAQEQGAEVVLTGFGRALRLTERI----AKRL-PEPAPVLELDVTNEEHLASLADRVREH   82 (256)
T ss_pred             CEEEEeCCCCcchHHHHHHHHHHHCCCEEEEecCccchhHHHHH----HHhc-CCCCcEEeCCCCCHHHHHHHHHHHHHH
Confidence            58999999  89999999999999999999999864  223333    3322 235778999999999999999999999


Q ss_pred             CCCeeEEEEcCCCCC------CCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccC
Q 025509           77 HHQLNILINNAGIMG------TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHE  150 (251)
Q Consensus        77 ~g~id~lv~~ag~~~------~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~  150 (251)
                      +|++|++|||||+..      ++.+.++++|++.+++|+.+++.++++++|+|++       .|+||++++.+ ..    
T Consensus        83 ~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~m~~-------~g~Iv~is~~~-~~----  150 (256)
T PRK07889         83 VDGLDGVVHSIGFAPQSALGGNFLDAPWEDVATALHVSAYSLKSLAKALLPLMNE-------GGSIVGLDFDA-TV----  150 (256)
T ss_pred             cCCCcEEEEccccccccccCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhccc-------CceEEEEeecc-cc----
Confidence            999999999999752      3456678899999999999999999999999964       47999998643 22    


Q ss_pred             CcccccCCCCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccC
Q 025509          151 GIRFDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  211 (251)
Q Consensus       151 ~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  211 (251)
                                 +.+.+..|++||+|+.+|+++|+.|+.++|  |+||+|+||+++|++...
T Consensus       151 -----------~~~~~~~Y~asKaal~~l~~~la~el~~~g--Irvn~v~PG~v~T~~~~~  198 (256)
T PRK07889        151 -----------AWPAYDWMGVAKAALESTNRYLARDLGPRG--IRVNLVAAGPIRTLAAKA  198 (256)
T ss_pred             -----------cCCccchhHHHHHHHHHHHHHHHHHhhhcC--eEEEeeccCcccChhhhc
Confidence                       456778899999999999999999999999  999999999999998654

>PRK06114 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.1e-34  Score=239.82  Aligned_cols=189  Identities=25%  Similarity=0.256  Sum_probs=163.4

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCch-hHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCC
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIA-AGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQ   79 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~-~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~   79 (251)
                      |++|||||++|||+++|++|+++|++|++++|+.+ .+++..+++...  +.++.++++|++++++++++++++.+.+++
T Consensus         9 k~~lVtG~s~gIG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~--~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~   86 (254)
T PRK06114          9 QVAFVTGAGSGIGQRIAIGLAQAGADVALFDLRTDDGLAETAEHIEAA--GRRAIQIAADVTSKADLRAAVARTEAELGA   86 (254)
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhc--CCceEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            57999999999999999999999999999999754 456666666543  456888999999999999999999999999


Q ss_pred             eeEEEEcCCCCC--CCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccccC
Q 025509           80 LNILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKI  157 (251)
Q Consensus        80 id~lv~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~  157 (251)
                      +|+||||||...  +..+.+.++|++.+++|+.+++.++++++|.|+++     +.++||++||.++..+.         
T Consensus        87 id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-----~~~~iv~isS~~~~~~~---------  152 (254)
T PRK06114         87 LTLAVNAAGIANANPAEEMEEEQWQTVMDINLTGVFLSCQAEARAMLEN-----GGGSIVNIASMSGIIVN---------  152 (254)
T ss_pred             CCEEEECCCCCCCCChHhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhc-----CCcEEEEECchhhcCCC---------
Confidence            999999999753  35567889999999999999999999999999875     46899999998776521         


Q ss_pred             CCCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccC
Q 025509          158 NDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  211 (251)
Q Consensus       158 ~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  211 (251)
                          +.+....|+++|+|+++|+++++.|+.++|  |+||+|+||+++|++...
T Consensus       153 ----~~~~~~~Y~~sKaa~~~l~~~la~e~~~~g--i~v~~v~PG~i~t~~~~~  200 (254)
T PRK06114        153 ----RGLLQAHYNASKAGVIHLSKSLAMEWVGRG--IRVNSISPGYTATPMNTR  200 (254)
T ss_pred             ----CCCCcchHHHHHHHHHHHHHHHHHHHhhcC--eEEEEEeecCccCccccc
Confidence                122357899999999999999999999999  999999999999998753

>KOG1610 consensus Corticosteroid 11-beta-dehydrogenase and related short chain-type dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism; General function prediction only]

Probab=100.00  E-value=1.6e-34  Score=238.97  Aligned_cols=209  Identities=26%  Similarity=0.375  Sum_probs=184.7

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcC--C
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQH--H   78 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~--g   78 (251)
                      |.|+|||+.+|.|+.+|++|.++|++|...+.+++.+++...+..    +.+...++.|++++++++++.+.+++..  .
T Consensus        30 k~VlITGCDSGfG~~LA~~L~~~Gf~V~Agcl~~~gae~L~~~~~----s~rl~t~~LDVT~~esi~~a~~~V~~~l~~~  105 (322)
T KOG1610|consen   30 KAVLITGCDSGFGRLLAKKLDKKGFRVFAGCLTEEGAESLRGETK----SPRLRTLQLDVTKPESVKEAAQWVKKHLGED  105 (322)
T ss_pred             cEEEEecCCcHHHHHHHHHHHhcCCEEEEEeecCchHHHHhhhhc----CCcceeEeeccCCHHHHHHHHHHHHHhcccc
Confidence            569999999999999999999999999999988888777766653    4578888999999999999998877643  3


Q ss_pred             CeeEEEEcCCCC---CCCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccc
Q 025509           79 QLNILINNAGIM---GTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFD  155 (251)
Q Consensus        79 ~id~lv~~ag~~---~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~  155 (251)
                      ++..||||||+.   .+.++.+.+++++++++|+.|++.++++++|++++.      .||||++||..|..         
T Consensus       106 gLwglVNNAGi~~~~g~~ewl~~~d~~~~l~vNllG~irvT~~~lpLlr~a------rGRvVnvsS~~GR~---------  170 (322)
T KOG1610|consen  106 GLWGLVNNAGISGFLGPDEWLTVEDYRKVLNVNLLGTIRVTKAFLPLLRRA------RGRVVNVSSVLGRV---------  170 (322)
T ss_pred             cceeEEeccccccccCccccccHHHHHHHHhhhhhhHHHHHHHHHHHHHhc------cCeEEEecccccCc---------
Confidence            599999999965   456778899999999999999999999999999985      79999999999987         


Q ss_pred             cCCCCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCCcchhhhhhhhhhhhhHhhhcccc
Q 025509          156 KINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRHNSLFRSMNTILHALPGIAGKCLLK  235 (251)
Q Consensus       156 ~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (251)
                            +.|...+|++||+|+++|+.+|++|+.+.|  |+|..|.||+.+|++.........++.+|...|.-..+..-+
T Consensus       171 ------~~p~~g~Y~~SK~aVeaf~D~lR~EL~~fG--V~VsiiePG~f~T~l~~~~~~~~~~~~~w~~l~~e~k~~YGe  242 (322)
T KOG1610|consen  171 ------ALPALGPYCVSKFAVEAFSDSLRRELRPFG--VKVSIIEPGFFKTNLANPEKLEKRMKEIWERLPQETKDEYGE  242 (322)
T ss_pred             ------cCcccccchhhHHHHHHHHHHHHHHHHhcC--cEEEEeccCccccccCChHHHHHHHHHHHhcCCHHHHHHHHH
Confidence                  778889999999999999999999999999  999999999999999997778888888888888866655444


Q ss_pred             C
Q 025509          236 N  236 (251)
Q Consensus       236 ~  236 (251)
                      .
T Consensus       243 d  243 (322)
T KOG1610|consen  243 D  243 (322)
T ss_pred             H
Confidence            3

>PRK08340 glucose-1-dehydrogenase; Provisional

Probab=100.00  E-value=2.1e-34  Score=241.54  Aligned_cols=186  Identities=21%  Similarity=0.215  Sum_probs=164.8

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      |++|||||++|||+++|++|+++|++|++++|+++.+++..+++.+.   ..+.++++|++++++++++++++.++++++
T Consensus         1 m~vlItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~---~~~~~~~~Dv~d~~~~~~~~~~~~~~~g~i   77 (259)
T PRK08340          1 MNVLVTASSRGIGFNVARELLKKGARVVISSRNEENLEKALKELKEY---GEVYAVKADLSDKDDLKNLVKEAWELLGGI   77 (259)
T ss_pred             CeEEEEcCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhc---CCceEEEcCCCCHHHHHHHHHHHHHhcCCC
Confidence            68999999999999999999999999999999988888887777542   357889999999999999999999999999


Q ss_pred             eEEEEcCCCCC----CCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCccccc
Q 025509           81 NILINNAGIMG----TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDK  156 (251)
Q Consensus        81 d~lv~~ag~~~----~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~  156 (251)
                      |+||||||...    +..+.+.++|.+.+++|+.+++.+++.++|.+.++    +..|+||++||.++..          
T Consensus        78 d~li~naG~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~----~~~g~iv~isS~~~~~----------  143 (259)
T PRK08340         78 DALVWNAGNVRCEPCMLHEAGYSDWLEAALLHLVAPGYLTTLLIQAWLEK----KMKGVLVYLSSVSVKE----------  143 (259)
T ss_pred             CEEEECCCCCCCCccccccccHHHHHHHHhhcchHHHHHHHHHHHHHHhc----CCCCEEEEEeCcccCC----------
Confidence            99999999742    24566788999999999999999999999998642    1468999999987654          


Q ss_pred             CCCCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCccc
Q 025509          157 INDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIR  210 (251)
Q Consensus       157 ~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~  210 (251)
                           +.+....|+++|+|+.+|+++|+.|+.++|  |+||+|+||+++|++.+
T Consensus       144 -----~~~~~~~y~~sKaa~~~~~~~la~e~~~~g--I~v~~v~pG~v~t~~~~  190 (259)
T PRK08340        144 -----PMPPLVLADVTRAGLVQLAKGVSRTYGGKG--IRAYTVLLGSFDTPGAR  190 (259)
T ss_pred             -----CCCCchHHHHHHHHHHHHHHHHHHHhCCCC--EEEEEeccCcccCccHH
Confidence                 567778999999999999999999999999  99999999999999875

>PRK05872 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.8e-34  Score=244.56  Aligned_cols=186  Identities=26%  Similarity=0.316  Sum_probs=166.2

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      |++|||||++|||+++|++|+++|++|++++|+.+.++++.+++..   +..+..+++|++|.++++++++++.+.++++
T Consensus        10 k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~l~~~~~~l~~---~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i   86 (296)
T PRK05872         10 KVVVVTGAARGIGAELARRLHARGAKLALVDLEEAELAALAAELGG---DDRVLTVVADVTDLAAMQAAAEEAVERFGGI   86 (296)
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcC---CCcEEEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence            5799999999999999999999999999999998887777666532   3457777899999999999999999999999


Q ss_pred             eEEEEcCCCCC--CCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccccCC
Q 025509           81 NILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKIN  158 (251)
Q Consensus        81 d~lv~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~  158 (251)
                      |+||||||+..  +..+.++++|++++++|+.+++.++++++|+|.++      .|+||++||.++..            
T Consensus        87 d~vI~nAG~~~~~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~~~------~g~iv~isS~~~~~------------  148 (296)
T PRK05872         87 DVVVANAGIASGGSVAQVDPDAFRRVIDVNLLGVFHTVRATLPALIER------RGYVLQVSSLAAFA------------  148 (296)
T ss_pred             CEEEECCCcCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc------CCEEEEEeCHhhcC------------
Confidence            99999999753  35677889999999999999999999999999763      58999999988765            


Q ss_pred             CCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCC
Q 025509          159 DPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRHN  212 (251)
Q Consensus       159 ~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~~  212 (251)
                         +.+++..|++||+++++|+++++.|+.++|  |+|++|+||+++|++....
T Consensus       149 ---~~~~~~~Y~asKaal~~~~~~l~~e~~~~g--i~v~~v~Pg~v~T~~~~~~  197 (296)
T PRK05872        149 ---AAPGMAAYCASKAGVEAFANALRLEVAHHG--VTVGSAYLSWIDTDLVRDA  197 (296)
T ss_pred             ---CCCCchHHHHHHHHHHHHHHHHHHHHHHHC--cEEEEEecCcccchhhhhc
Confidence               667788999999999999999999999999  9999999999999997653

>PRK07831 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.3e-33  Score=237.05  Aligned_cols=191  Identities=23%  Similarity=0.266  Sum_probs=168.4

Q ss_pred             CEEEEECCCC-hhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCC
Q 025509            1 MDIVITGATS-GIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQ   79 (251)
Q Consensus         1 k~vlItG~s~-gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~   79 (251)
                      |++|||||++ |||+++++.|+++|++|++++|+.+++++..+++.+.++...+.++++|++++++++++++++.+.+|+
T Consensus        18 k~vlItG~sg~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~   97 (262)
T PRK07831         18 KVVLVTAAAGTGIGSATARRALEEGARVVISDIHERRLGETADELAAELGLGRVEAVVCDVTSEAQVDALIDAAVERLGR   97 (262)
T ss_pred             CEEEEECCCcccHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            5799999985 999999999999999999999998888888777766554456889999999999999999999888899


Q ss_pred             eeEEEEcCCCCC--CCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccccC
Q 025509           80 LNILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKI  157 (251)
Q Consensus        80 id~lv~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~  157 (251)
                      +|+||||||...  ++.+.+.++|++.+++|+.+++.++++++|.|+.+.    ..++|++++|..+..           
T Consensus        98 id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~----~~g~iv~~ss~~~~~-----------  162 (262)
T PRK07831         98 LDVLVNNAGLGGQTPVVDMTDDEWSRVLDVTLTGTFRATRAALRYMRARG----HGGVIVNNASVLGWR-----------  162 (262)
T ss_pred             CCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC----CCcEEEEeCchhhcC-----------
Confidence            999999999643  356778899999999999999999999999998751    268999999977665           


Q ss_pred             CCCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCC
Q 025509          158 NDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRHN  212 (251)
Q Consensus       158 ~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~~  212 (251)
                          +.+++..|+++|+|+++|+++++.|+.++|  |+||+|+||+++|++.+..
T Consensus       163 ----~~~~~~~Y~~sKaal~~~~~~la~e~~~~g--I~v~~i~Pg~~~t~~~~~~  211 (262)
T PRK07831        163 ----AQHGQAHYAAAKAGVMALTRCSALEAAEYG--VRINAVAPSIAMHPFLAKV  211 (262)
T ss_pred             ----CCCCCcchHHHHHHHHHHHHHHHHHhCccC--eEEEEEeeCCccCcccccc
Confidence                556778999999999999999999999999  9999999999999987643

>PRK08265 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.3e-34  Score=240.71  Aligned_cols=183  Identities=22%  Similarity=0.289  Sum_probs=163.2

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      |++|||||++|||+++|++|+++|++|++++|+.+.+++..+++     +..+.++++|+++.+++.++++++.+.++++
T Consensus         7 k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~i   81 (261)
T PRK08265          7 KVAIVTGGATLIGAAVARALVAAGARVAIVDIDADNGAAVAASL-----GERARFIATDITDDAAIERAVATVVARFGRV   81 (261)
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-----CCeeEEEEecCCCHHHHHHHHHHHHHHhCCC
Confidence            58999999999999999999999999999999987776665544     4568899999999999999999999999999


Q ss_pred             eEEEEcCCCCCC-CCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccccCCC
Q 025509           81 NILINNAGIMGT-PFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKIND  159 (251)
Q Consensus        81 d~lv~~ag~~~~-~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~  159 (251)
                      |++|||||.... ..+.++++|++.+++|+.+++.++++++|+|. +     +.|+||++||.++..             
T Consensus        82 d~lv~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~-~-----~~g~ii~isS~~~~~-------------  142 (261)
T PRK08265         82 DILVNLACTYLDDGLASSRADWLAALDVNLVSAAMLAQAAHPHLA-R-----GGGAIVNFTSISAKF-------------  142 (261)
T ss_pred             CEEEECCCCCCCCcCcCCHHHHHHHHhHhhHHHHHHHHHHHHHHh-c-----CCcEEEEECchhhcc-------------
Confidence            999999997532 34567899999999999999999999999997 3     368999999988766             


Q ss_pred             CCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccC
Q 025509          160 PSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  211 (251)
Q Consensus       160 ~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  211 (251)
                        +.+++..|+++|+++++++++++.|+.+.|  |+||+|+||+++|++...
T Consensus       143 --~~~~~~~Y~asKaa~~~~~~~la~e~~~~g--i~vn~v~PG~~~t~~~~~  190 (261)
T PRK08265        143 --AQTGRWLYPASKAAIRQLTRSMAMDLAPDG--IRVNSVSPGWTWSRVMDE  190 (261)
T ss_pred             --CCCCCchhHHHHHHHHHHHHHHHHHhcccC--EEEEEEccCCccChhhhh
Confidence              566778999999999999999999999988  999999999999998653

>TIGR01500 sepiapter_red sepiapterin reductase

Probab=100.00  E-value=7e-34  Score=237.99  Aligned_cols=189  Identities=25%  Similarity=0.326  Sum_probs=163.2

Q ss_pred             EEEEECCCChhHHHHHHHHHH----cCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcC
Q 025509            2 DIVITGATSGIGTETARVLAL----RGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQH   77 (251)
Q Consensus         2 ~vlItG~s~gIG~a~a~~l~~----~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~   77 (251)
                      ++|||||++|||+++|++|++    .|++|++++|+++.++++.+++....++..+.++++|+++.++++++++++.+.+
T Consensus         2 ~vlItGas~GIG~~~a~~la~~~~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~   81 (256)
T TIGR01500         2 VCLVTGASRGFGRTIAQELAKCLKSPGSVLVLSARNDEALRQLKAEIGAERSGLRVVRVSLDLGAEAGLEQLLKALRELP   81 (256)
T ss_pred             EEEEecCCCchHHHHHHHHHHhhccCCcEEEEEEcCHHHHHHHHHHHHhcCCCceEEEEEeccCCHHHHHHHHHHHHhcc
Confidence            689999999999999999997    7999999999998888888888664445678999999999999999999998776


Q ss_pred             CC----eeEEEEcCCCCCC----CCcC-CchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccc
Q 025509           78 HQ----LNILINNAGIMGT----PFML-SKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAY  148 (251)
Q Consensus        78 g~----id~lv~~ag~~~~----~~~~-~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~  148 (251)
                      +.    .|+||||||....    ..+. +.++|++.+++|+.+++.+++.++|+|+++.   +..++||++||.++..  
T Consensus        82 g~~~~~~~~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~~~l~~~~---~~~~~iv~isS~~~~~--  156 (256)
T TIGR01500        82 RPKGLQRLLLINNAGTLGDVSKGFVDLSDSTQVQNYWALNLTSMLCLTSSVLKAFKDSP---GLNRTVVNISSLCAIQ--  156 (256)
T ss_pred             ccCCCceEEEEeCCcccCccccccccCCCHHHHHHHHHhhhHHHHHHHHHHHHHHhhcC---CCCCEEEEECCHHhCC--
Confidence            64    3799999997432    2222 4578999999999999999999999998641   1247999999987765  


Q ss_pred             cCCcccccCCCCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCccc
Q 025509          149 HEGIRFDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIR  210 (251)
Q Consensus       149 ~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~  210 (251)
                                   +.+++..|++||+|+++|+++|+.|+.+.|  |+||+|+||+++|+|.+
T Consensus       157 -------------~~~~~~~Y~asKaal~~l~~~la~e~~~~~--i~v~~v~PG~v~T~~~~  203 (256)
T TIGR01500       157 -------------PFKGWALYCAGKAARDMLFQVLALEEKNPN--VRVLNYAPGVLDTDMQQ  203 (256)
T ss_pred             -------------CCCCchHHHHHHHHHHHHHHHHHHHhcCCC--eEEEEecCCcccchHHH
Confidence                         677888999999999999999999999988  99999999999999875

This model describes sepiapterin reductase, a member of the short chain dehydrogenase/reductase family. The enzyme catalyzes the last step in the biosynthesis of tetrahydrobiopterin. A similar enzyme in Bacillus cereus was isolated for its ability to convert benzil to (S)-benzoin, a property sepiapterin reductase also shares. Cutoff scores for this model are set such that benzil reductase scores between trusted and noise cutoffs.

>PRK08085 gluconate 5-dehydrogenase; Provisional

Probab=100.00  E-value=6.3e-34  Score=237.80  Aligned_cols=187  Identities=24%  Similarity=0.321  Sum_probs=167.4

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      |++|||||++|||+++|++|+++|++|++++|++.++++..+++.+.  +..+.++.+|++++++++++++++.+.++++
T Consensus        10 k~~lItGas~giG~~ia~~L~~~G~~vvl~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i   87 (254)
T PRK08085         10 KNILITGSAQGIGFLLATGLAEYGAEIIINDITAERAELAVAKLRQE--GIKAHAAPFNVTHKQEVEAAIEHIEKDIGPI   87 (254)
T ss_pred             CEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHhc--CCeEEEEecCCCCHHHHHHHHHHHHHhcCCC
Confidence            57999999999999999999999999999999988888877777554  4567889999999999999999999999999


Q ss_pred             eEEEEcCCCCC--CCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccccCC
Q 025509           81 NILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKIN  158 (251)
Q Consensus        81 d~lv~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~  158 (251)
                      |++|||||...  +..+.+.++|++.+++|+.+++.+++++.+++.++     ..++||++||..+..            
T Consensus        88 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-----~~~~iv~isS~~~~~------------  150 (254)
T PRK08085         88 DVLINNAGIQRRHPFTEFPEQEWNDVIAVNQTAVFLVSQAVARYMVKR-----QAGKIINICSMQSEL------------  150 (254)
T ss_pred             CEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-----CCcEEEEEccchhcc------------
Confidence            99999999753  35567889999999999999999999999999764     468999999977654            


Q ss_pred             CCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccC
Q 025509          159 DPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  211 (251)
Q Consensus       159 ~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  211 (251)
                         +.+++..|+++|+++++++++++.|+.++|  |++|+|+||+++|++...
T Consensus       151 ---~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g--i~v~~v~pG~~~t~~~~~  198 (254)
T PRK08085        151 ---GRDTITPYAASKGAVKMLTRGMCVELARHN--IQVNGIAPGYFKTEMTKA  198 (254)
T ss_pred             ---CCCCCcchHHHHHHHHHHHHHHHHHHHhhC--eEEEEEEeCCCCCcchhh
Confidence               566778999999999999999999999999  999999999999998764

>PRK12747 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.2e-33  Score=235.89  Aligned_cols=185  Identities=28%  Similarity=0.354  Sum_probs=159.4

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEe-cCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHh----
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGV-RDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNI----   75 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~-r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~----   75 (251)
                      |++|||||++|||+++|++|+++|++|++.+ |+.+..++...++.+.  +..+..+.+|+++.+++..+++++.+    
T Consensus         5 k~~lItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   82 (252)
T PRK12747          5 KVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSN--GGSAFSIGANLESLHGVEALYSSLDNELQN   82 (252)
T ss_pred             CEEEEeCCCChHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHHHhc--CCceEEEecccCCHHHHHHHHHHHHHHhhh
Confidence            6899999999999999999999999998875 5666666666666543  45678899999999999998888764    


Q ss_pred             cCC--CeeEEEEcCCCCC--CCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCC
Q 025509           76 QHH--QLNILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEG  151 (251)
Q Consensus        76 ~~g--~id~lv~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~  151 (251)
                      .++  ++|+||||||...  +..+.+.++|++++++|+.+++.++++++|.|++       .|+||++||.++..     
T Consensus        83 ~~g~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~-------~g~iv~isS~~~~~-----  150 (252)
T PRK12747         83 RTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRD-------NSRIINISSAATRI-----  150 (252)
T ss_pred             hcCCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHhhc-------CCeEEEECCccccc-----
Confidence            333  8999999999753  3556788899999999999999999999999965       37999999988765     


Q ss_pred             cccccCCCCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccC
Q 025509          152 IRFDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  211 (251)
Q Consensus       152 ~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  211 (251)
                                +.++..+|++||+|+++|+++++.|+.++|  |+||+|+||+++|++...
T Consensus       151 ----------~~~~~~~Y~~sKaa~~~~~~~la~e~~~~g--irvn~v~Pg~v~t~~~~~  198 (252)
T PRK12747        151 ----------SLPDFIAYSMTKGAINTMTFTLAKQLGARG--ITVNAILPGFIKTDMNAE  198 (252)
T ss_pred             ----------CCCCchhHHHHHHHHHHHHHHHHHHHhHcC--CEEEEEecCCccCchhhh
Confidence                      667778999999999999999999999999  999999999999998653

>PRK07035 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2e-33  Score=234.41  Aligned_cols=187  Identities=26%  Similarity=0.360  Sum_probs=167.1

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      |++|||||++|||++++++|+++|++|++++|+.+.+++..+++.+.  +..+.++++|+++.++++.+++++.+.++++
T Consensus         9 k~vlItGas~gIG~~l~~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   86 (252)
T PRK07035          9 KIALVTGASRGIGEAIAKLLAQQGAHVIVSSRKLDGCQAVADAIVAA--GGKAEALACHIGEMEQIDALFAHIRERHGRL   86 (252)
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCeEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence            57999999999999999999999999999999988888877777554  3467889999999999999999999999999


Q ss_pred             eEEEEcCCCC---CCCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccccC
Q 025509           81 NILINNAGIM---GTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKI  157 (251)
Q Consensus        81 d~lv~~ag~~---~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~  157 (251)
                      |++|||||..   .+..+.+.++++..+++|+.+++.++++++|+++++     ..++|+++||..+..           
T Consensus        87 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-----~~~~iv~~sS~~~~~-----------  150 (252)
T PRK07035         87 DILVNNAAANPYFGHILDTDLGAFQKTVDVNIRGYFFMSVEAGKLMKEQ-----GGGSIVNVASVNGVS-----------  150 (252)
T ss_pred             CEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhC-----CCcEEEEECchhhcC-----------
Confidence            9999999964   234567888999999999999999999999999874     468999999987665           


Q ss_pred             CCCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccC
Q 025509          158 NDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  211 (251)
Q Consensus       158 ~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  211 (251)
                          +.+++..|++||+++++|+++++.|+.++|  |+|++|+||+++|++...
T Consensus       151 ----~~~~~~~Y~~sK~al~~~~~~l~~e~~~~g--i~v~~i~PG~v~t~~~~~  198 (252)
T PRK07035        151 ----PGDFQGIYSITKAAVISMTKAFAKECAPFG--IRVNALLPGLTDTKFASA  198 (252)
T ss_pred             ----CCCCCcchHHHHHHHHHHHHHHHHHHhhcC--EEEEEEeeccccCccccc
Confidence                667788999999999999999999999999  999999999999998764

>KOG4169 consensus 15-hydroxyprostaglandin dehydrogenase and related dehydrogenases [Lipid transport and metabolism; General function prediction only]

Probab=100.00  E-value=4.7e-35  Score=231.07  Aligned_cols=186  Identities=25%  Similarity=0.315  Sum_probs=167.0

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      |++++|||.+|||++++++|+++|..+.++..+.+. .+...++++..|...+.++++|+++..+++..++++...+|.+
T Consensus         6 Kna~vtggagGIGl~~sk~Ll~kgik~~~i~~~~En-~~a~akL~ai~p~~~v~F~~~DVt~~~~~~~~f~ki~~~fg~i   84 (261)
T KOG4169|consen    6 KNALVTGGAGGIGLATSKALLEKGIKVLVIDDSEEN-PEAIAKLQAINPSVSVIFIKCDVTNRGDLEAAFDKILATFGTI   84 (261)
T ss_pred             ceEEEecCCchhhHHHHHHHHHcCchheeehhhhhC-HHHHHHHhccCCCceEEEEEeccccHHHHHHHHHHHHHHhCce
Confidence            689999999999999999999999987777766655 5667778899999999999999999999999999999999999


Q ss_pred             eEEEEcCCCCCCCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccccCCCC
Q 025509           81 NILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDP  160 (251)
Q Consensus        81 d~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~  160 (251)
                      |++||+||+.      .+.+|++.+.+|+.|.+.-+...+|+|.++  +-+.+|-||++||..|..              
T Consensus        85 DIlINgAGi~------~dkd~e~Ti~vNLtgvin~T~~alpyMdk~--~gG~GGiIvNmsSv~GL~--------------  142 (261)
T KOG4169|consen   85 DILINGAGIL------DDKDWERTINVNLTGVINGTQLALPYMDKK--QGGKGGIIVNMSSVAGLD--------------  142 (261)
T ss_pred             EEEEcccccc------cchhHHHhhccchhhhhhhhhhhhhhhhhh--cCCCCcEEEEeccccccC--------------
Confidence            9999999973      356799999999999999999999999875  223579999999999887              


Q ss_pred             CCCCcccccchhHHHHHHHHHHHHHH--hccCCCcEEEEEeeCCcccCCcccCC
Q 025509          161 SGYNGFRAYSQSKLANILHANELARR--LKEDGVDITANSVHPGAIATNIIRHN  212 (251)
Q Consensus       161 ~~~~~~~~Y~~sK~a~~~~~~~la~e--~~~~g~~i~v~~v~Pg~v~t~~~~~~  212 (251)
                       |.|..+.|++||+++.+|+||||..  |.+.|  |++++||||++.|.+....
T Consensus       143 -P~p~~pVY~AsKaGVvgFTRSla~~ayy~~sG--V~~~avCPG~t~t~l~~~~  193 (261)
T KOG4169|consen  143 -PMPVFPVYAASKAGVVGFTRSLADLAYYQRSG--VRFNAVCPGFTRTDLAENI  193 (261)
T ss_pred             -ccccchhhhhcccceeeeehhhhhhhhHhhcC--EEEEEECCCcchHHHHHHH
Confidence             8999999999999999999999865  56678  9999999999999997765

>PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated

Probab=100.00  E-value=1.6e-33  Score=235.45  Aligned_cols=186  Identities=21%  Similarity=0.263  Sum_probs=161.4

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      |++|||||++|||+++|++|+++|++|++++++.  .++..+++.+.  +..+.++++|+++.++++++++++.++++++
T Consensus        11 k~~lItG~~~gIG~a~a~~l~~~G~~vv~~~~~~--~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~   86 (253)
T PRK08993         11 KVAVVTGCDTGLGQGMALGLAEAGCDIVGINIVE--PTETIEQVTAL--GRRFLSLTADLRKIDGIPALLERAVAEFGHI   86 (253)
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCCEEEEecCcc--hHHHHHHHHhc--CCeEEEEECCCCCHHHHHHHHHHHHHHhCCC
Confidence            6899999999999999999999999999887754  24444445432  4568889999999999999999999999999


Q ss_pred             eEEEEcCCCCC--CCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccccCC
Q 025509           81 NILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKIN  158 (251)
Q Consensus        81 d~lv~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~  158 (251)
                      |++|||||...  +..+.+.++|++.+++|+.+++.++++++|+|.+++    ..|+||++||..+..            
T Consensus        87 D~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~----~~g~iv~isS~~~~~------------  150 (253)
T PRK08993         87 DILVNNAGLIRREDAIEFSEKDWDDVMNLNIKSVFFMSQAAAKHFIAQG----NGGKIINIASMLSFQ------------  150 (253)
T ss_pred             CEEEECCCCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCC----CCeEEEEECchhhcc------------
Confidence            99999999753  356778899999999999999999999999998751    258999999987665            


Q ss_pred             CCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccC
Q 025509          159 DPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  211 (251)
Q Consensus       159 ~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  211 (251)
                         +.+....|+++|+|+++++++++.|+.++|  |+||.|+||+++|++...
T Consensus       151 ---~~~~~~~Y~~sKaa~~~~~~~la~e~~~~g--i~v~~v~pG~v~T~~~~~  198 (253)
T PRK08993        151 ---GGIRVPSYTASKSGVMGVTRLMANEWAKHN--INVNAIAPGYMATNNTQQ  198 (253)
T ss_pred             ---CCCCCcchHHHHHHHHHHHHHHHHHhhhhC--eEEEEEeeCcccCcchhh
Confidence               556678999999999999999999999999  999999999999998754

>PLN02780 ketoreductase/ oxidoreductase

Probab=100.00  E-value=3.1e-34  Score=247.44  Aligned_cols=188  Identities=23%  Similarity=0.281  Sum_probs=159.0

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCC--HHHHHHHHHHHHhcCC
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSS--LASVRNFASEYNIQHH   78 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~--~~~i~~~~~~~~~~~g   78 (251)
                      ++++||||++|||+++|++|+++|++|++++|+++++++..+++.+.+++..+..+.+|+++  .+.++.+.+.+.  ..
T Consensus        54 ~~~lITGAs~GIG~alA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~l~~~~~--~~  131 (320)
T PLN02780         54 SWALVTGPTDGIGKGFAFQLARKGLNLVLVARNPDKLKDVSDSIQSKYSKTQIKTVVVDFSGDIDEGVKRIKETIE--GL  131 (320)
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHCCCcEEEEEEEECCCCcHHHHHHHHHHhc--CC
Confidence            57999999999999999999999999999999999999998888777655678889999985  334444444331  12


Q ss_pred             CeeEEEEcCCCCC----CCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCccc
Q 025509           79 QLNILINNAGIMG----TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRF  154 (251)
Q Consensus        79 ~id~lv~~ag~~~----~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~  154 (251)
                      ++|++|||||+..    ++.+.+++++++.+++|+.|++.++++++|.|.++     +.|+||++||.++...       
T Consensus       132 didilVnnAG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~-----~~g~IV~iSS~a~~~~-------  199 (320)
T PLN02780        132 DVGVLINNVGVSYPYARFFHEVDEELLKNLIKVNVEGTTKVTQAVLPGMLKR-----KKGAIINIGSGAAIVI-------  199 (320)
T ss_pred             CccEEEEecCcCCCCCcccccCCHHHHHHHHHHhHHHHHHHHHHHHHHHHhc-----CCcEEEEEechhhccC-------
Confidence            5779999999753    25577889999999999999999999999999875     4689999999876530       


Q ss_pred             ccCCCCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCccc
Q 025509          155 DKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIR  210 (251)
Q Consensus       155 ~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~  210 (251)
                            .+.|..+.|++||+|+++|+++|+.|+.++|  |+|++|+||+++|++..
T Consensus       200 ------~~~p~~~~Y~aSKaal~~~~~~L~~El~~~g--I~V~~v~PG~v~T~~~~  247 (320)
T PLN02780        200 ------PSDPLYAVYAATKAYIDQFSRCLYVEYKKSG--IDVQCQVPLYVATKMAS  247 (320)
T ss_pred             ------CCCccchHHHHHHHHHHHHHHHHHHHHhccC--eEEEEEeeCceecCccc
Confidence                  0236678999999999999999999999999  99999999999999976

>PRK06196 oxidoreductase; Provisional

Probab=100.00  E-value=2e-33  Score=242.14  Aligned_cols=196  Identities=42%  Similarity=0.615  Sum_probs=165.4

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      |++|||||++|||+++|++|+++|++|++++|+.+++++..+++.      .+.++++|++|.++++++++++.+.++++
T Consensus        27 k~vlITGasggIG~~~a~~L~~~G~~Vv~~~R~~~~~~~~~~~l~------~v~~~~~Dl~d~~~v~~~~~~~~~~~~~i  100 (315)
T PRK06196         27 KTAIVTGGYSGLGLETTRALAQAGAHVIVPARRPDVAREALAGID------GVEVVMLDLADLESVRAFAERFLDSGRRI  100 (315)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhh------hCeEEEccCCCHHHHHHHHHHHHhcCCCC
Confidence            579999999999999999999999999999999887776665542      37889999999999999999999888999


Q ss_pred             eEEEEcCCCCCCCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccccCCCC
Q 025509           81 NILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDP  160 (251)
Q Consensus        81 d~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~  160 (251)
                      |+||||||...+..+.+.++|+..+++|+.+++.+++.++|.+.++     +.++||++||.++...   ...+.+....
T Consensus       101 D~li~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~-----~~~~iV~vSS~~~~~~---~~~~~~~~~~  172 (315)
T PRK06196        101 DILINNAGVMACPETRVGDGWEAQFATNHLGHFALVNLLWPALAAG-----AGARVVALSSAGHRRS---PIRWDDPHFT  172 (315)
T ss_pred             CEEEECCCCCCCCCccCCccHHHHHHHhhHHHHHHHHHHHHHHHhc-----CCCeEEEECCHHhccC---CCCccccCcc
Confidence            9999999976554556778899999999999999999999999875     3589999999764331   1222222223


Q ss_pred             CCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCC
Q 025509          161 SGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRHN  212 (251)
Q Consensus       161 ~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~~  212 (251)
                      .+.+++..|+.||++++.|++.++.++.+.|  |+|++|+||++.|++.+..
T Consensus       173 ~~~~~~~~Y~~SK~a~~~~~~~la~~~~~~g--i~v~~v~PG~v~t~~~~~~  222 (315)
T PRK06196        173 RGYDKWLAYGQSKTANALFAVHLDKLGKDQG--VRAFSVHPGGILTPLQRHL  222 (315)
T ss_pred             CCCChHHHHHHHHHHHHHHHHHHHHHhcCCC--cEEEEeeCCcccCCccccC
Confidence            3556677899999999999999999999888  9999999999999987643

>PRK06172 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.4e-33  Score=234.12  Aligned_cols=187  Identities=26%  Similarity=0.302  Sum_probs=167.9

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      |++|||||++|||.++|++|+++|++|++++|+++.+++..+++.+.  +.++.++.+|+++.+++.++++++.+.++++
T Consensus         8 k~ilItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~i   85 (253)
T PRK06172          8 KVALVTGGAAGIGRATALAFAREGAKVVVADRDAAGGEETVALIREA--GGEALFVACDVTRDAEVKALVEQTIAAYGRL   85 (253)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhc--CCceEEEEcCCCCHHHHHHHHHHHHHHhCCC
Confidence            58999999999999999999999999999999988888777776543  4578999999999999999999999899999


Q ss_pred             eEEEEcCCCCC---CCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccccC
Q 025509           81 NILINNAGIMG---TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKI  157 (251)
Q Consensus        81 d~lv~~ag~~~---~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~  157 (251)
                      |++|||||...   +..+.+.++|++.+++|+.+++.++++++|++.++     ..+++|++||..+..           
T Consensus        86 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-----~~~~ii~~sS~~~~~-----------  149 (253)
T PRK06172         86 DYAFNNAGIEIEQGRLAEGSEAEFDAIMGVNVKGVWLCMKYQIPLMLAQ-----GGGAIVNTASVAGLG-----------  149 (253)
T ss_pred             CEEEECCCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-----CCcEEEEECchhhcc-----------
Confidence            99999999753   24567889999999999999999999999999775     457999999987765           


Q ss_pred             CCCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccC
Q 025509          158 NDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  211 (251)
Q Consensus       158 ~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  211 (251)
                          +.+++..|+++|+|+++|+++++.|+.++|  |+|++|+||+++|++.+.
T Consensus       150 ----~~~~~~~Y~~sKaa~~~~~~~la~e~~~~~--i~v~~i~PG~v~t~~~~~  197 (253)
T PRK06172        150 ----AAPKMSIYAASKHAVIGLTKSAAIEYAKKG--IRVNAVCPAVIDTDMFRR  197 (253)
T ss_pred             ----CCCCCchhHHHHHHHHHHHHHHHHHhcccC--eEEEEEEeCCccChhhhh
Confidence                677888999999999999999999999988  999999999999999765

>PRK08643 acetoin reductase; Validated

Probab=100.00  E-value=1.4e-33  Score=235.82  Aligned_cols=188  Identities=25%  Similarity=0.330  Sum_probs=166.9

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      |++|||||++|||.+++++|+++|++|++++|+.+..++...++.+.  +.++.++++|+++++++.++++++.++++++
T Consensus         3 k~~lItGas~giG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i   80 (256)
T PRK08643          3 KVALVTGAGQGIGFAIAKRLVEDGFKVAIVDYNEETAQAAADKLSKD--GGKAIAVKADVSDRDQVFAAVRQVVDTFGDL   80 (256)
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCeEEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence            68999999999999999999999999999999988887777776543  4568889999999999999999999999999


Q ss_pred             eEEEEcCCCCC--CCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccccCC
Q 025509           81 NILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKIN  158 (251)
Q Consensus        81 d~lv~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~  158 (251)
                      |++|||||...  +..+.+.++|++.+++|+.+++.+++.+++.+++.    +..++||++||..+..            
T Consensus        81 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~----~~~~~iv~~sS~~~~~------------  144 (256)
T PRK08643         81 NVVVNNAGVAPTTPIETITEEQFDKVYNINVGGVIWGIQAAQEAFKKL----GHGGKIINATSQAGVV------------  144 (256)
T ss_pred             CEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc----CCCCEEEEECcccccc------------
Confidence            99999999753  35567789999999999999999999999999764    1257999999987665            


Q ss_pred             CCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccC
Q 025509          159 DPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  211 (251)
Q Consensus       159 ~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  211 (251)
                         +.++...|+++|++++.|+++++.|+.++|  |+|++|+||+++|+++..
T Consensus       145 ---~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g--i~v~~i~Pg~v~t~~~~~  192 (256)
T PRK08643        145 ---GNPELAVYSSTKFAVRGLTQTAARDLASEG--ITVNAYAPGIVKTPMMFD  192 (256)
T ss_pred             ---CCCCCchhHHHHHHHHHHHHHHHHHhcccC--cEEEEEeeCCCcChhhhH
Confidence               566778999999999999999999999999  999999999999998764

>PRK06398 aldose dehydrogenase; Validated

Probab=100.00  E-value=1.7e-33  Score=236.01  Aligned_cols=175  Identities=25%  Similarity=0.281  Sum_probs=156.7

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      |++|||||++|||+++|++|+++|++|++++|+...             ...+.++++|++++++++++++++.+.++++
T Consensus         7 k~vlItGas~gIG~~ia~~l~~~G~~Vi~~~r~~~~-------------~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~i   73 (258)
T PRK06398          7 KVAIVTGGSQGIGKAVVNRLKEEGSNVINFDIKEPS-------------YNDVDYFKVDVSNKEQVIKGIDYVISKYGRI   73 (258)
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCccc-------------cCceEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            689999999999999999999999999999997643             2258889999999999999999999999999


Q ss_pred             eEEEEcCCCCC--CCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccccCC
Q 025509           81 NILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKIN  158 (251)
Q Consensus        81 d~lv~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~  158 (251)
                      |+||||||+..  +..+.+.++|++.+++|+.+++.++++++|+|+++     ..++||++||..+..            
T Consensus        74 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-----~~g~iv~isS~~~~~------------  136 (258)
T PRK06398         74 DILVNNAGIESYGAIHAVEEDEWDRIINVNVNGIFLMSKYTIPYMLKQ-----DKGVIINIASVQSFA------------  136 (258)
T ss_pred             CEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc-----CCeEEEEeCcchhcc------------
Confidence            99999999753  35667889999999999999999999999999875     468999999987765            


Q ss_pred             CCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccC
Q 025509          159 DPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  211 (251)
Q Consensus       159 ~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  211 (251)
                         +.+++..|+++|+|+++|+++++.|+.+ +  |+||+|+||+++|++...
T Consensus       137 ---~~~~~~~Y~~sKaal~~~~~~la~e~~~-~--i~vn~i~PG~v~T~~~~~  183 (258)
T PRK06398        137 ---VTRNAAAYVTSKHAVLGLTRSIAVDYAP-T--IRCVAVCPGSIRTPLLEW  183 (258)
T ss_pred             ---CCCCCchhhhhHHHHHHHHHHHHHHhCC-C--CEEEEEecCCccchHHhh
Confidence               6677889999999999999999999985 4  999999999999998653

>PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=2.9e-33  Score=233.97  Aligned_cols=183  Identities=23%  Similarity=0.296  Sum_probs=156.2

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      |+++||||++|||+++|++|+++|++|++++++....   .+++.+    ..+.++.+|++++++++++++++.+.++++
T Consensus         8 k~~lItGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~---~~~l~~----~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i   80 (255)
T PRK06463          8 KVALITGGTRGIGRAIAEAFLREGAKVAVLYNSAENE---AKELRE----KGVFTIKCDVGNRDQVKKSKEVVEKEFGRV   80 (255)
T ss_pred             CEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCcHHH---HHHHHh----CCCeEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence            6899999999999999999999999999887654322   222322    147889999999999999999999999999


Q ss_pred             eEEEEcCCCCC--CCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccccCC
Q 025509           81 NILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKIN  158 (251)
Q Consensus        81 d~lv~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~  158 (251)
                      |+||||||...  +..+.+.++|++.+++|+.+++.+++.++|.|+++     ..++||++||..+...           
T Consensus        81 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~-----~~g~iv~isS~~~~~~-----------  144 (255)
T PRK06463         81 DVLVNNAGIMYLMPFEEFDEEKYNKMIKINLNGAIYTTYEFLPLLKLS-----KNGAIVNIASNAGIGT-----------  144 (255)
T ss_pred             CEEEECCCcCCCCChhhCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhc-----CCcEEEEEcCHHhCCC-----------
Confidence            99999999753  35567889999999999999999999999999864     4689999999776531           


Q ss_pred             CCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccC
Q 025509          159 DPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  211 (251)
Q Consensus       159 ~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  211 (251)
                         +.++...|++||+|+++|+++++.|+.+.|  |+||+|+||+++|++...
T Consensus       145 ---~~~~~~~Y~asKaa~~~~~~~la~e~~~~~--i~v~~i~Pg~v~t~~~~~  192 (255)
T PRK06463        145 ---AAEGTTFYAITKAGIIILTRRLAFELGKYG--IRVNAVAPGWVETDMTLS  192 (255)
T ss_pred             ---CCCCccHhHHHHHHHHHHHHHHHHHhhhcC--eEEEEEeeCCCCCchhhc
Confidence               334667899999999999999999999989  999999999999998753

>PRK07109 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.5e-33  Score=244.67  Aligned_cols=188  Identities=25%  Similarity=0.252  Sum_probs=168.9

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      |++|||||++|||+++|++|+++|++|++++|+++++++..+++.+.  +.++.++++|++|.++++++++++.+++|++
T Consensus         9 k~vlITGas~gIG~~la~~la~~G~~Vvl~~R~~~~l~~~~~~l~~~--g~~~~~v~~Dv~d~~~v~~~~~~~~~~~g~i   86 (334)
T PRK07109          9 QVVVITGASAGVGRATARAFARRGAKVVLLARGEEGLEALAAEIRAA--GGEALAVVADVADAEAVQAAADRAEEELGPI   86 (334)
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHc--CCcEEEEEecCCCHHHHHHHHHHHHHHCCCC
Confidence            57999999999999999999999999999999988888887777654  5678899999999999999999999999999


Q ss_pred             eEEEEcCCCC--CCCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccccCC
Q 025509           81 NILINNAGIM--GTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKIN  158 (251)
Q Consensus        81 d~lv~~ag~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~  158 (251)
                      |++|||||..  .++.+.+.+++++.+++|+.+++.+++.++|+|+++     +.++||++||..+..            
T Consensus        87 D~lInnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~l~~~~~~-----~~g~iV~isS~~~~~------------  149 (334)
T PRK07109         87 DTWVNNAMVTVFGPFEDVTPEEFRRVTEVTYLGVVHGTLAALRHMRPR-----DRGAIIQVGSALAYR------------  149 (334)
T ss_pred             CEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-----CCcEEEEeCChhhcc------------
Confidence            9999999964  346678899999999999999999999999999875     468999999988765            


Q ss_pred             CCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCccc
Q 025509          159 DPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIR  210 (251)
Q Consensus       159 ~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~  210 (251)
                         +.+.+..|+++|+++++|+++++.|+.+.+.+|+++.|+||.++||+..
T Consensus       150 ---~~~~~~~Y~asK~a~~~~~~~l~~el~~~~~~I~v~~v~Pg~v~T~~~~  198 (334)
T PRK07109        150 ---SIPLQSAYCAAKHAIRGFTDSLRCELLHDGSPVSVTMVQPPAVNTPQFD  198 (334)
T ss_pred             ---CCCcchHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEEeCCCccCchhh
Confidence               5677789999999999999999999987555599999999999999764

>PRK08277 D-mannonate oxidoreductase; Provisional

Probab=100.00  E-value=4e-33  Score=236.02  Aligned_cols=187  Identities=28%  Similarity=0.289  Sum_probs=166.3

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      |+++||||++|||++++++|+++|++|++++|+.+.+++..+++.+.  +.++.++++|+++++++..+++++.++++++
T Consensus        11 k~vlVtGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~i   88 (278)
T PRK08277         11 KVAVITGGGGVLGGAMAKELARAGAKVAILDRNQEKAEAVVAEIKAA--GGEALAVKADVLDKESLEQARQQILEDFGPC   88 (278)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCeEEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence            57999999999999999999999999999999988777777776543  4568899999999999999999999999999


Q ss_pred             eEEEEcCCCCC-----------------CCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCcc
Q 025509           81 NILINNAGIMG-----------------TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEG  143 (251)
Q Consensus        81 d~lv~~ag~~~-----------------~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~  143 (251)
                      |++|||||...                 ++.+.+.++|++.+++|+.+++.++++++|.+.++     +.++||++||..
T Consensus        89 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-----~~g~ii~isS~~  163 (278)
T PRK08277         89 DILINGAGGNHPKATTDNEFHELIEPTKTFFDLDEEGFEFVFDLNLLGTLLPTQVFAKDMVGR-----KGGNIINISSMN  163 (278)
T ss_pred             CEEEECCCCCCcccccccccccccccccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhc-----CCcEEEEEccch
Confidence            99999999642                 13456788999999999999999999999999875     468999999988


Q ss_pred             ccccccCCcccccCCCCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccC
Q 025509          144 HRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  211 (251)
Q Consensus       144 ~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  211 (251)
                      +..               +.++...|+++|+|+++|+++++.|+.+.|  |+||+|+||+++|++.+.
T Consensus       164 ~~~---------------~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g--irvn~v~Pg~v~t~~~~~  214 (278)
T PRK08277        164 AFT---------------PLTKVPAYSAAKAAISNFTQWLAVHFAKVG--IRVNAIAPGFFLTEQNRA  214 (278)
T ss_pred             hcC---------------CCCCCchhHHHHHHHHHHHHHHHHHhCccC--eEEEEEEeccCcCcchhh
Confidence            765               667788999999999999999999999988  999999999999998653

>COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]

Probab=100.00  E-value=2.1e-33  Score=218.38  Aligned_cols=179  Identities=28%  Similarity=0.298  Sum_probs=162.1

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      .+||||||++|||+++|++|.+.|-+||+++|++.++++++.+      ...+....||+.|.++++++++.++++|+.+
T Consensus         6 nTiLITGG~sGIGl~lak~f~elgN~VIi~gR~e~~L~e~~~~------~p~~~t~v~Dv~d~~~~~~lvewLkk~~P~l   79 (245)
T COG3967           6 NTILITGGASGIGLALAKRFLELGNTVIICGRNEERLAEAKAE------NPEIHTEVCDVADRDSRRELVEWLKKEYPNL   79 (245)
T ss_pred             cEEEEeCCcchhhHHHHHHHHHhCCEEEEecCcHHHHHHHHhc------CcchheeeecccchhhHHHHHHHHHhhCCch
Confidence            3799999999999999999999999999999999998887765      3568889999999999999999999999999


Q ss_pred             eEEEEcCCCCCCC----CcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCccccc
Q 025509           81 NILINNAGIMGTP----FMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDK  156 (251)
Q Consensus        81 d~lv~~ag~~~~~----~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~  156 (251)
                      ++||||||+....    .+...++.++.+++|+.+++.+++.++|++.++     +.+.||+|||..+..          
T Consensus        80 NvliNNAGIqr~~dlt~~e~~~~~~~~eI~~Nl~API~Lt~~~lphl~~q-----~~a~IInVSSGLafv----------  144 (245)
T COG3967          80 NVLINNAGIQRNEDLTGAEDLLDDAEQEIATNLLAPIRLTALLLPHLLRQ-----PEATIINVSSGLAFV----------  144 (245)
T ss_pred             heeeecccccchhhccCCcchhhHHHHHHHHhhhhHHHHHHHHHHHHHhC-----CCceEEEeccccccC----------
Confidence            9999999986541    233456678899999999999999999999986     578999999998887          


Q ss_pred             CCCCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCC
Q 025509          157 INDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATN  207 (251)
Q Consensus       157 ~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~  207 (251)
                           |....+.|+++|+|++.++.+|+..+...+  |.|.-+.|+.|+|+
T Consensus       145 -----Pm~~~PvYcaTKAaiHsyt~aLR~Qlk~t~--veVIE~~PP~V~t~  188 (245)
T COG3967         145 -----PMASTPVYCATKAAIHSYTLALREQLKDTS--VEVIELAPPLVDTT  188 (245)
T ss_pred             -----cccccccchhhHHHHHHHHHHHHHHhhhcc--eEEEEecCCceecC
Confidence                 677778999999999999999999999988  99999999999997

>PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated

Probab=100.00  E-value=6.5e-33  Score=231.90  Aligned_cols=187  Identities=28%  Similarity=0.379  Sum_probs=166.4

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      |++|||||++|||++++++|+++|++|++++|+.+..++..+++.+.  +.++.++.+|+++.+++.++++.+.+.++++
T Consensus        12 k~vlVtG~s~gIG~~la~~l~~~G~~vv~~~r~~~~~~~~~~~l~~~--~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~   89 (255)
T PRK06113         12 KCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQL--GGQAFACRCDITSEQELSALADFALSKLGKV   89 (255)
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhc--CCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            68999999999999999999999999999999988888777776543  4568889999999999999999998889999


Q ss_pred             eEEEEcCCCCCC-CCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccccCCC
Q 025509           81 NILINNAGIMGT-PFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKIND  159 (251)
Q Consensus        81 d~lv~~ag~~~~-~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~  159 (251)
                      |++|||||...+ ..+.+.++|++.+++|+.+++.++++++|+|.+.     +.++||++||.++..             
T Consensus        90 d~li~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-----~~~~iv~isS~~~~~-------------  151 (255)
T PRK06113         90 DILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKN-----GGGVILTITSMAAEN-------------  151 (255)
T ss_pred             CEEEECCCCCCCCCCCCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhc-----CCcEEEEEecccccC-------------
Confidence            999999997543 3467789999999999999999999999999764     357999999987665             


Q ss_pred             CCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccC
Q 025509          160 PSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  211 (251)
Q Consensus       160 ~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  211 (251)
                        +.+++..|+++|+|+++|+++++.++.+.|  |+||+|+||+++|++...
T Consensus       152 --~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~--i~v~~v~pg~~~t~~~~~  199 (255)
T PRK06113        152 --KNINMTSYASSKAAASHLVRNMAFDLGEKN--IRVNGIAPGAILTDALKS  199 (255)
T ss_pred             --CCCCcchhHHHHHHHHHHHHHHHHHhhhhC--eEEEEEeccccccccccc
Confidence              566778999999999999999999999999  999999999999998764

>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=100.00  E-value=2e-33  Score=235.36  Aligned_cols=186  Identities=25%  Similarity=0.324  Sum_probs=163.9

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      |++|||||++|||+++|++|+++|++|++++|+ +..++..+.+.+.  +.++.++++|+++.++++++++++.+.+|++
T Consensus        16 k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~-~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~i   92 (258)
T PRK06935         16 KVAIVTGGNTGLGQGYAVALAKAGADIIITTHG-TNWDETRRLIEKE--GRKVTFVQVDLTKPESAEKVVKEALEEFGKI   92 (258)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCC-cHHHHHHHHHHhc--CCceEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence            689999999999999999999999999999998 5556655555432  4568899999999999999999999999999


Q ss_pred             eEEEEcCCCCC--CCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccccCC
Q 025509           81 NILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKIN  158 (251)
Q Consensus        81 d~lv~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~  158 (251)
                      |++|||||...  +..+.+.++|++.+++|+.+++.++++++|.|+++     +.++||++||..+..            
T Consensus        93 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-----~~g~iv~isS~~~~~------------  155 (258)
T PRK06935         93 DILVNNAGTIRRAPLLEYKDEDWNAVMDINLNSVYHLSQAVAKVMAKQ-----GSGKIINIASMLSFQ------------  155 (258)
T ss_pred             CEEEECCCCCCCCCcccCCHHHHHHHHHHhCHHHHHHHHHHHHHHHhc-----CCeEEEEECCHHhcc------------
Confidence            99999999753  34566788999999999999999999999999875     468999999987765            


Q ss_pred             CCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccC
Q 025509          159 DPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  211 (251)
Q Consensus       159 ~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  211 (251)
                         +.+.+..|+++|+|++++++++++|+.+.|  |+||.|+||+++|++...
T Consensus       156 ---~~~~~~~Y~asK~a~~~~~~~la~e~~~~g--i~v~~i~PG~v~t~~~~~  203 (258)
T PRK06935        156 ---GGKFVPAYTASKHGVAGLTKAFANELAAYN--IQVNAIAPGYIKTANTAP  203 (258)
T ss_pred             ---CCCCchhhHHHHHHHHHHHHHHHHHhhhhC--eEEEEEEeccccccchhh
Confidence               566778999999999999999999999999  999999999999998654

>PRK07097 gluconate 5-dehydrogenase; Provisional

Probab=100.00  E-value=2.5e-33  Score=235.68  Aligned_cols=187  Identities=24%  Similarity=0.324  Sum_probs=167.5

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      |++|||||++|||+++|++|+++|++|++++|+.+++++..+.+.+.  +.++.++++|+++.++++++++++.+.++++
T Consensus        11 k~~lItGa~~~iG~~ia~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i   88 (265)
T PRK07097         11 KIALITGASYGIGFAIAKAYAKAGATIVFNDINQELVDKGLAAYREL--GIEAHGYVCDVTDEDGVQAMVSQIEKEVGVI   88 (265)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhc--CCceEEEEcCCCCHHHHHHHHHHHHHhCCCC
Confidence            57999999999999999999999999999999988887777666543  4578899999999999999999999999999


Q ss_pred             eEEEEcCCCCC--CCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccccCC
Q 025509           81 NILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKIN  158 (251)
Q Consensus        81 d~lv~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~  158 (251)
                      |+||||||...  +..+.+.++|++++++|+.+++.+++.++|+|+++     ..++||++||..+..            
T Consensus        89 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-----~~g~iv~isS~~~~~------------  151 (265)
T PRK07097         89 DILVNNAGIIKRIPMLEMSAEDFRQVIDIDLNAPFIVSKAVIPSMIKK-----GHGKIINICSMMSEL------------  151 (265)
T ss_pred             CEEEECCCCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhc-----CCcEEEEEcCccccC------------
Confidence            99999999754  35567889999999999999999999999999875     468999999987655            


Q ss_pred             CCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccC
Q 025509          159 DPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  211 (251)
Q Consensus       159 ~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  211 (251)
                         +.+++..|+++|++++.|+++++.++.++|  |+|++|+||++.|++...
T Consensus       152 ---~~~~~~~Y~~sKaal~~l~~~la~e~~~~g--i~v~~v~Pg~v~t~~~~~  199 (265)
T PRK07097        152 ---GRETVSAYAAAKGGLKMLTKNIASEYGEAN--IQCNGIGPGYIATPQTAP  199 (265)
T ss_pred             ---CCCCCccHHHHHHHHHHHHHHHHHHhhhcC--ceEEEEEeccccccchhh
Confidence               566778999999999999999999999999  999999999999998754

>PRK09242 tropinone reductase; Provisional

Probab=100.00  E-value=3.1e-33  Score=234.00  Aligned_cols=189  Identities=27%  Similarity=0.314  Sum_probs=170.9

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      |++|||||++|||+++++.|+++|++|++++|+.+.+++..+++.+..++.++.++.+|+++.++++++++++.+.++++
T Consensus        10 k~~lItGa~~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~i   89 (257)
T PRK09242         10 QTALITGASKGIGLAIAREFLGLGADVLIVARDADALAQARDELAEEFPEREVHGLAADVSDDEDRRAILDWVEDHWDGL   89 (257)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence            68999999999999999999999999999999988888888888766666789999999999999999999999999999


Q ss_pred             eEEEEcCCCCC--CCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccccCC
Q 025509           81 NILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKIN  158 (251)
Q Consensus        81 d~lv~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~  158 (251)
                      |+||||||...  +..+.+.++|++.+++|+.+++.++++++|+|.++     +.++||++||.++..            
T Consensus        90 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-----~~~~ii~~sS~~~~~------------  152 (257)
T PRK09242         90 HILVNNAGGNIRKAAIDYTEDEWRGIFETNLFSAFELSRYAHPLLKQH-----ASSAIVNIGSVSGLT------------  152 (257)
T ss_pred             CEEEECCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhc-----CCceEEEECccccCC------------
Confidence            99999999742  35567889999999999999999999999999875     458999999987765            


Q ss_pred             CCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccC
Q 025509          159 DPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  211 (251)
Q Consensus       159 ~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  211 (251)
                         +.+....|+++|++++.|+++++.|+.+.|  |++++|+||+++|++...
T Consensus       153 ---~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~--i~v~~i~Pg~i~t~~~~~  200 (257)
T PRK09242        153 ---HVRSGAPYGMTKAALLQMTRNLAVEWAEDG--IRVNAVAPWYIRTPLTSG  200 (257)
T ss_pred             ---CCCCCcchHHHHHHHHHHHHHHHHHHHHhC--eEEEEEEECCCCCccccc
Confidence               566778999999999999999999999888  999999999999998764

>PRK07985 oxidoreductase; Provisional

Probab=100.00  E-value=2.3e-33  Score=239.51  Aligned_cols=184  Identities=27%  Similarity=0.292  Sum_probs=159.7

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCc--hhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCC
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDI--AAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHH   78 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~--~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g   78 (251)
                      |++|||||++|||+++|++|+++|++|++++|+.  +..+++.+.+.+.  +.++.++.+|+++.+++.++++++.+.++
T Consensus        50 k~vlITGas~gIG~aia~~L~~~G~~Vi~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g  127 (294)
T PRK07985         50 RKALVTGGDSGIGRAAAIAYAREGADVAISYLPVEEEDAQDVKKIIEEC--GRKAVLLPGDLSDEKFARSLVHEAHKALG  127 (294)
T ss_pred             CEEEEECCCCcHHHHHHHHHHHCCCEEEEecCCcchhhHHHHHHHHHHc--CCeEEEEEccCCCHHHHHHHHHHHHHHhC
Confidence            5799999999999999999999999999988753  3344444444332  45688899999999999999999999999


Q ss_pred             CeeEEEEcCCCC---CCCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccc
Q 025509           79 QLNILINNAGIM---GTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFD  155 (251)
Q Consensus        79 ~id~lv~~ag~~---~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~  155 (251)
                      ++|++|||||..   .+..+.++++|++.+++|+.+++.++++++|+|.+       .++||++||..+..         
T Consensus       128 ~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~-------~g~iv~iSS~~~~~---------  191 (294)
T PRK07985        128 GLDIMALVAGKQVAIPDIADLTSEQFQKTFAINVFALFWLTQEAIPLLPK-------GASIITTSSIQAYQ---------  191 (294)
T ss_pred             CCCEEEECCCCCcCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhc-------CCEEEEECCchhcc---------
Confidence            999999999964   23567789999999999999999999999999864       47999999987765         


Q ss_pred             cCCCCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCccc
Q 025509          156 KINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIR  210 (251)
Q Consensus       156 ~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~  210 (251)
                            +.+.+.+|+++|+|+++|+++++.|++++|  |+||+|+||+++|++..
T Consensus       192 ------~~~~~~~Y~asKaal~~l~~~la~el~~~g--Irvn~i~PG~v~t~~~~  238 (294)
T PRK07985        192 ------PSPHLLDYAATKAAILNYSRGLAKQVAEKG--IRVNIVAPGPIWTALQI  238 (294)
T ss_pred             ------CCCCcchhHHHHHHHHHHHHHHHHHHhHhC--cEEEEEECCcCcccccc
Confidence                  567778999999999999999999999999  99999999999999854

>PLN02253 xanthoxin dehydrogenase

Probab=100.00  E-value=2.8e-33  Score=237.14  Aligned_cols=185  Identities=25%  Similarity=0.294  Sum_probs=162.7

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      |++|||||++|||+++|++|+++|++|++++|+.+..++..+++.   .+.++.++++|++|.++++++++.+.+.++++
T Consensus        19 k~~lItGas~gIG~~la~~l~~~G~~v~~~~~~~~~~~~~~~~~~---~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~g~i   95 (280)
T PLN02253         19 KVALVTGGATGIGESIVRLFHKHGAKVCIVDLQDDLGQNVCDSLG---GEPNVCFFHCDVTVEDDVSRAVDFTVDKFGTL   95 (280)
T ss_pred             CEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhc---CCCceEEEEeecCCHHHHHHHHHHHHHHhCCC
Confidence            579999999999999999999999999999998776666655542   13468899999999999999999999999999


Q ss_pred             eEEEEcCCCCC----CCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCccccc
Q 025509           81 NILINNAGIMG----TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDK  156 (251)
Q Consensus        81 d~lv~~ag~~~----~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~  156 (251)
                      |+||||||...    ++.+.+.++|+..+++|+.+++.++++++|+|.++     ..|+|++++|..+..          
T Consensus        96 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~-----~~g~ii~isS~~~~~----------  160 (280)
T PLN02253         96 DIMVNNAGLTGPPCPDIRNVELSEFEKVFDVNVKGVFLGMKHAARIMIPL-----KKGSIVSLCSVASAI----------  160 (280)
T ss_pred             CEEEECCCcCCCCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhc-----CCceEEEecChhhcc----------
Confidence            99999999753    24567889999999999999999999999999764     468999999987765          


Q ss_pred             CCCCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCccc
Q 025509          157 INDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIR  210 (251)
Q Consensus       157 ~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~  210 (251)
                           +.++...|+++|+|+++++++++.|+.+.|  |+|++|+||.+.|++..
T Consensus       161 -----~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g--i~v~~i~pg~v~t~~~~  207 (280)
T PLN02253        161 -----GGLGPHAYTGSKHAVLGLTRSVAAELGKHG--IRVNCVSPYAVPTALAL  207 (280)
T ss_pred             -----cCCCCcccHHHHHHHHHHHHHHHHHhhhcC--eEEEEEeeCcccccccc
Confidence                 455667899999999999999999999999  99999999999999754

>PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional

Probab=100.00  E-value=2.9e-33  Score=234.99  Aligned_cols=181  Identities=24%  Similarity=0.266  Sum_probs=158.2

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      |++|||||++|||+++|++|+++|++|++++|+++++++..+++     +.++.++++|++++++++++++++.+.++++
T Consensus         7 k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i   81 (263)
T PRK06200          7 QVALITGGGSGIGRALVERFLAEGARVAVLERSAEKLASLRQRF-----GDHVLVVEGDVTSYADNQRAVDQTVDAFGKL   81 (263)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-----CCcceEEEccCCCHHHHHHHHHHHHHhcCCC
Confidence            58999999999999999999999999999999987776655443     3468889999999999999999999999999


Q ss_pred             eEEEEcCCCCC---CCCcCCchh----hHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcc
Q 025509           81 NILINNAGIMG---TPFMLSKDN----IELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIR  153 (251)
Q Consensus        81 d~lv~~ag~~~---~~~~~~~~~----~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~  153 (251)
                      |+||||||+..   ++.+.++++    |++++++|+.+++.++++++|.|.++      .|+||++||.++..       
T Consensus        82 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~------~g~iv~~sS~~~~~-------  148 (263)
T PRK06200         82 DCFVGNAGIWDYNTSLVDIPAETLDTAFDEIFNVNVKGYLLGAKAALPALKAS------GGSMIFTLSNSSFY-------  148 (263)
T ss_pred             CEEEECCCCcccCCCcccCChhHHHHHHHHHeeeccHhHHHHHHHHHHHHHhc------CCEEEEECChhhcC-------
Confidence            99999999743   344555554    88999999999999999999998763      58999999987765       


Q ss_pred             cccCCCCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCccc
Q 025509          154 FDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIR  210 (251)
Q Consensus       154 ~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~  210 (251)
                              +.++...|+++|+|+++|+++++.|+++ +  |+||+|+||+++|++..
T Consensus       149 --------~~~~~~~Y~~sK~a~~~~~~~la~el~~-~--Irvn~i~PG~i~t~~~~  194 (263)
T PRK06200        149 --------PGGGGPLYTASKHAVVGLVRQLAYELAP-K--IRVNGVAPGGTVTDLRG  194 (263)
T ss_pred             --------CCCCCchhHHHHHHHHHHHHHHHHHHhc-C--cEEEEEeCCccccCCcC
Confidence                    5566779999999999999999999987 4  99999999999999865

>PRK07825 short chain dehydrogenase; Provisional

Probab=100.00  E-value=8.1e-33  Score=233.53  Aligned_cols=184  Identities=27%  Similarity=0.361  Sum_probs=164.7

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      |++|||||++|||+++|++|+++|++|++++|+++.+++..+++     + .+.++.+|++++++++++++++.+.++++
T Consensus         6 ~~ilVtGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~-----~-~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   79 (273)
T PRK07825          6 KVVAITGGARGIGLATARALAALGARVAIGDLDEALAKETAAEL-----G-LVVGGPLDVTDPASFAAFLDAVEADLGPI   79 (273)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh-----c-cceEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            57999999999999999999999999999999987776665544     1 47789999999999999999999989999


Q ss_pred             eEEEEcCCCCC--CCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccccCC
Q 025509           81 NILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKIN  158 (251)
Q Consensus        81 d~lv~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~  158 (251)
                      |++|||||...  +..+.+.+++++++++|+.+++.+++.++|.|.++     +.++||++||.++..            
T Consensus        80 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~-----~~g~iv~isS~~~~~------------  142 (273)
T PRK07825         80 DVLVNNAGVMPVGPFLDEPDAVTRRILDVNVYGVILGSKLAAPRMVPR-----GRGHVVNVASLAGKI------------  142 (273)
T ss_pred             CEEEECCCcCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-----CCCEEEEEcCccccC------------
Confidence            99999999753  35567888999999999999999999999999885     568999999988766            


Q ss_pred             CCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCC
Q 025509          159 DPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRHN  212 (251)
Q Consensus       159 ~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~~  212 (251)
                         +.+++..|+++|+++.+|+++++.|+.+.|  |+++.|+||++.|++....
T Consensus       143 ---~~~~~~~Y~asKaa~~~~~~~l~~el~~~g--i~v~~v~Pg~v~t~~~~~~  191 (273)
T PRK07825        143 ---PVPGMATYCASKHAVVGFTDAARLELRGTG--VHVSVVLPSFVNTELIAGT  191 (273)
T ss_pred             ---CCCCCcchHHHHHHHHHHHHHHHHHhhccC--cEEEEEeCCcCcchhhccc
Confidence               677888999999999999999999999989  9999999999999987653

>PRK05866 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.1e-32  Score=235.14  Aligned_cols=188  Identities=27%  Similarity=0.296  Sum_probs=163.1

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      |++|||||++|||+++|++|+++|++|++++|+.+.+++..+++.+.  +..+.++++|++|.+++.++++++.+.++++
T Consensus        41 k~vlItGasggIG~~la~~La~~G~~Vi~~~R~~~~l~~~~~~l~~~--~~~~~~~~~Dl~d~~~v~~~~~~~~~~~g~i  118 (293)
T PRK05866         41 KRILLTGASSGIGEAAAEQFARRGATVVAVARREDLLDAVADRITRA--GGDAMAVPCDLSDLDAVDALVADVEKRIGGV  118 (293)
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc--CCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            57999999999999999999999999999999988888877776543  4568899999999999999999999999999


Q ss_pred             eEEEEcCCCCCC--CCc--CCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCccccc
Q 025509           81 NILINNAGIMGT--PFM--LSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDK  156 (251)
Q Consensus        81 d~lv~~ag~~~~--~~~--~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~  156 (251)
                      |++|||||....  ..+  .++++++..+++|+.|++.++++++|.|.++     +.++||++||.++...         
T Consensus       119 d~li~~AG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~-----~~g~iv~isS~~~~~~---------  184 (293)
T PRK05866        119 DILINNAGRSIRRPLAESLDRWHDVERTMVLNYYAPLRLIRGLAPGMLER-----GDGHIINVATWGVLSE---------  184 (293)
T ss_pred             CEEEECCCCCCCcchhhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-----CCcEEEEECChhhcCC---------
Confidence            999999997532  222  1357788999999999999999999999875     4689999999654321         


Q ss_pred             CCCCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccC
Q 025509          157 INDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  211 (251)
Q Consensus       157 ~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  211 (251)
                           +.+....|+++|+|+++|+++++.|+.+.|  |+|++|+||+++|++...
T Consensus       185 -----~~p~~~~Y~asKaal~~l~~~la~e~~~~g--I~v~~v~pg~v~T~~~~~  232 (293)
T PRK05866        185 -----ASPLFSVYNASKAALSAVSRVIETEWGDRG--VHSTTLYYPLVATPMIAP  232 (293)
T ss_pred             -----CCCCcchHHHHHHHHHHHHHHHHHHhcccC--cEEEEEEcCcccCccccc
Confidence                 245677999999999999999999999988  999999999999999864

>PRK12859 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=5e-33  Score=232.86  Aligned_cols=186  Identities=26%  Similarity=0.340  Sum_probs=159.6

Q ss_pred             CEEEEECCC--ChhHHHHHHHHHHcCCEEEEEecC-----------chhHHHHHHHHHhhCCCCceEEEEecCCCHHHHH
Q 025509            1 MDIVITGAT--SGIGTETARVLALRGVHVVMGVRD-----------IAAGKDVKETIVKEIPSAKVDAMELDLSSLASVR   67 (251)
Q Consensus         1 k~vlItG~s--~gIG~a~a~~l~~~G~~Vi~~~r~-----------~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~   67 (251)
                      |++|||||+  +|||+++|++|+++|++|++++|+           .....+..+++.+.  +.++.++++|+++.+++.
T Consensus         7 k~vlVtGas~~~giG~~~a~~l~~~G~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--g~~~~~~~~D~~~~~~i~   84 (256)
T PRK12859          7 KVAVVTGVSRLDGIGAAICKELAEAGADIFFTYWTAYDKEMPWGVDQDEQIQLQEELLKN--GVKVSSMELDLTQNDAPK   84 (256)
T ss_pred             cEEEEECCCCCCChHHHHHHHHHHCCCeEEEEecccccccccccccHHHHHHHHHHHHhc--CCeEEEEEcCCCCHHHHH
Confidence            589999999  499999999999999999988643           12223333444332  567889999999999999


Q ss_pred             HHHHHHHhcCCCeeEEEEcCCCC--CCCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCcccc
Q 025509           68 NFASEYNIQHHQLNILINNAGIM--GTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHR  145 (251)
Q Consensus        68 ~~~~~~~~~~g~id~lv~~ag~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~  145 (251)
                      ++++++.+.+|++|++|||||..  .+..+.+.++|++.+++|+.+++.++++++|.|.++     ..|+||++||..+.
T Consensus        85 ~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-----~~g~iv~isS~~~~  159 (256)
T PRK12859         85 ELLNKVTEQLGYPHILVNNAAYSTNNDFSNLTAEELDKHYMVNVRATTLLSSQFARGFDKK-----SGGRIINMTSGQFQ  159 (256)
T ss_pred             HHHHHHHHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhc-----CCeEEEEEcccccC
Confidence            99999999999999999999965  345678899999999999999999999999999764     46899999998765


Q ss_pred             ccccCCcccccCCCCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCccc
Q 025509          146 LAYHEGIRFDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIR  210 (251)
Q Consensus       146 ~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~  210 (251)
                      .               +.+++..|+++|+++++|+++++.++.++|  |+||+|+||+++|++..
T Consensus       160 ~---------------~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~--i~v~~v~PG~i~t~~~~  207 (256)
T PRK12859        160 G---------------PMVGELAYAATKGAIDALTSSLAAEVAHLG--ITVNAINPGPTDTGWMT  207 (256)
T ss_pred             C---------------CCCCchHHHHHHHHHHHHHHHHHHHhhhhC--eEEEEEEEccccCCCCC
Confidence            4               667888999999999999999999999988  99999999999999754

>PRK06128 oxidoreductase; Provisional

Probab=100.00  E-value=3.4e-33  Score=239.12  Aligned_cols=185  Identities=26%  Similarity=0.317  Sum_probs=160.8

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCch--hHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCC
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIA--AGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHH   78 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~--~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g   78 (251)
                      |++|||||++|||+++|++|+++|++|++++++.+  ..++..+.+.+.  +.++.++.+|+++.++++++++++.+.++
T Consensus        56 k~vlITGas~gIG~~~a~~l~~~G~~V~i~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g  133 (300)
T PRK06128         56 RKALITGADSGIGRATAIAFAREGADIALNYLPEEEQDAAEVVQLIQAE--GRKAVALPGDLKDEAFCRQLVERAVKELG  133 (300)
T ss_pred             CEEEEecCCCcHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHHHHc--CCeEEEEecCCCCHHHHHHHHHHHHHHhC
Confidence            58999999999999999999999999999887543  334444444433  45688999999999999999999999999


Q ss_pred             CeeEEEEcCCCCC---CCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccc
Q 025509           79 QLNILINNAGIMG---TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFD  155 (251)
Q Consensus        79 ~id~lv~~ag~~~---~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~  155 (251)
                      ++|+||||||...   +..+.+.++|++.+++|+.+++.++++++|+|.+       +++||++||..+..         
T Consensus       134 ~iD~lV~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~-------~~~iv~~sS~~~~~---------  197 (300)
T PRK06128        134 GLDILVNIAGKQTAVKDIADITTEQFDATFKTNVYAMFWLCKAAIPHLPP-------GASIINTGSIQSYQ---------  197 (300)
T ss_pred             CCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhcCc-------CCEEEEECCccccC---------
Confidence            9999999999642   3557788999999999999999999999999854       47999999987765         


Q ss_pred             cCCCCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccC
Q 025509          156 KINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  211 (251)
Q Consensus       156 ~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  211 (251)
                            +.+++..|++||+|+++|+++|+.++.++|  |+||+|+||+++|++...
T Consensus       198 ------~~~~~~~Y~asK~a~~~~~~~la~el~~~g--I~v~~v~PG~i~t~~~~~  245 (300)
T PRK06128        198 ------PSPTLLDYASTKAAIVAFTKALAKQVAEKG--IRVNAVAPGPVWTPLQPS  245 (300)
T ss_pred             ------CCCCchhHHHHHHHHHHHHHHHHHHhhhcC--cEEEEEEECcCcCCCccc
Confidence                  566778999999999999999999999999  999999999999998653

>PRK07024 short chain dehydrogenase; Provisional

Probab=100.00  E-value=4.3e-33  Score=233.26  Aligned_cols=186  Identities=26%  Similarity=0.336  Sum_probs=163.5

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      |++|||||++|||.+++++|+++|++|++++|+.+.+++..+++...   .++.++.+|+++.+++.++++++.++++++
T Consensus         3 ~~vlItGas~gIG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~---~~~~~~~~Dl~~~~~i~~~~~~~~~~~g~i   79 (257)
T PRK07024          3 LKVFITGASSGIGQALAREYARQGATLGLVARRTDALQAFAARLPKA---ARVSVYAADVRDADALAAAAADFIAAHGLP   79 (257)
T ss_pred             CEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcccC---CeeEEEEcCCCCHHHHHHHHHHHHHhCCCC
Confidence            58999999999999999999999999999999987776665544221   278899999999999999999999889999


Q ss_pred             eEEEEcCCCCCC--C-CcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccccC
Q 025509           81 NILINNAGIMGT--P-FMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKI  157 (251)
Q Consensus        81 d~lv~~ag~~~~--~-~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~  157 (251)
                      |++|||||....  . .+.+.++++..+++|+.+++.+++.++|.|+++     +.++||++||.++..           
T Consensus        80 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~l~~~~~~-----~~~~iv~isS~~~~~-----------  143 (257)
T PRK07024         80 DVVIANAGISVGTLTEEREDLAVFREVMDTNYFGMVATFQPFIAPMRAA-----RRGTLVGIASVAGVR-----------  143 (257)
T ss_pred             CEEEECCCcCCCccccccCCHHHHHHHHhHhcHHHHHHHHHHHHHHHhc-----CCCEEEEEechhhcC-----------
Confidence            999999997532  2 225778899999999999999999999999775     468999999988766           


Q ss_pred             CCCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccC
Q 025509          158 NDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  211 (251)
Q Consensus       158 ~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  211 (251)
                          +.+....|++||++++.|+++++.|+.+.|  |+|++|+||++.|++...
T Consensus       144 ----~~~~~~~Y~asK~a~~~~~~~l~~e~~~~g--i~v~~v~Pg~v~t~~~~~  191 (257)
T PRK07024        144 ----GLPGAGAYSASKAAAIKYLESLRVELRPAG--VRVVTIAPGYIRTPMTAH  191 (257)
T ss_pred             ----CCCCCcchHHHHHHHHHHHHHHHHHhhccC--cEEEEEecCCCcCchhhc
Confidence                677788999999999999999999999988  999999999999998654

>PRK07677 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.6e-32  Score=229.18  Aligned_cols=185  Identities=22%  Similarity=0.232  Sum_probs=161.9

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      |++|||||++|||++++++|+++|++|++++|+...+++..+.+.+.  +..+.++++|++++++++++++++.+.++++
T Consensus         2 k~~lItG~s~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   79 (252)
T PRK07677          2 KVVIITGGSSGMGKAMAKRFAEEGANVVITGRTKEKLEEAKLEIEQF--PGQVLTVQMDVRNPEDVQKMVEQIDEKFGRI   79 (252)
T ss_pred             CEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCcEEEEEecCCCHHHHHHHHHHHHHHhCCc
Confidence            68999999999999999999999999999999988777777666543  3578899999999999999999999889999


Q ss_pred             eEEEEcCCCC--CCCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccccCC
Q 025509           81 NILINNAGIM--GTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKIN  158 (251)
Q Consensus        81 d~lv~~ag~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~  158 (251)
                      |++|||||..  .+..+.+.++|++.+++|+.+++.++++++|+|.++.    ..|+||++||..+..            
T Consensus        80 d~lI~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~----~~g~ii~isS~~~~~------------  143 (252)
T PRK07677         80 DALINNAAGNFICPAEDLSVNGWNSVIDIVLNGTFYCSQAVGKYWIEKG----IKGNIINMVATYAWD------------  143 (252)
T ss_pred             cEEEECCCCCCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcC----CCEEEEEEcChhhcc------------
Confidence            9999999964  2355778899999999999999999999999987641    258999999987654            


Q ss_pred             CCCCCCcccccchhHHHHHHHHHHHHHHhcc-CCCcEEEEEeeCCcccCCc
Q 025509          159 DPSGYNGFRAYSQSKLANILHANELARRLKE-DGVDITANSVHPGAIATNI  208 (251)
Q Consensus       159 ~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~-~g~~i~v~~v~Pg~v~t~~  208 (251)
                         +.+...+|+++|+|+++|+++|+.|+.+ .|  |+|++|+||+++|+.
T Consensus       144 ---~~~~~~~Y~~sKaa~~~~~~~la~e~~~~~g--i~v~~v~PG~v~~~~  189 (252)
T PRK07677        144 ---AGPGVIHSAAAKAGVLAMTRTLAVEWGRKYG--IRVNAIAPGPIERTG  189 (252)
T ss_pred             ---CCCCCcchHHHHHHHHHHHHHHHHHhCcccC--eEEEEEeeccccccc
Confidence               5567779999999999999999999975 58  999999999999643

>PRK06484 short chain dehydrogenase; Validated

Probab=100.00  E-value=2.4e-33  Score=256.94  Aligned_cols=182  Identities=26%  Similarity=0.347  Sum_probs=164.2

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      |++|||||++|||+++|++|+++|++|++++|++++++++.+++     +..+..+.+|++|+++++++++++.+++|++
T Consensus       270 k~~lItGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i  344 (520)
T PRK06484        270 RVVAITGGARGIGRAVADRFAAAGDRLLIIDRDAEGAKKLAEAL-----GDEHLSVQADITDEAAVESAFAQIQARWGRL  344 (520)
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-----CCceeEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            68999999999999999999999999999999987777666544     4567789999999999999999999999999


Q ss_pred             eEEEEcCCCCC---CCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccccC
Q 025509           81 NILINNAGIMG---TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKI  157 (251)
Q Consensus        81 d~lv~~ag~~~---~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~  157 (251)
                      |+||||||...   ++.+.+.++|++++++|+.+++.++++++|+|.       ..|+||++||.++..           
T Consensus       345 d~li~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~-------~~g~iv~isS~~~~~-----------  406 (520)
T PRK06484        345 DVLVNNAGIAEVFKPSLEQSAEDFTRVYDVNLSGAFACARAAARLMS-------QGGVIVNLGSIASLL-----------  406 (520)
T ss_pred             CEEEECCCCcCCCCChhhCCHHHHHHHHHhCcHHHHHHHHHHHHHhc-------cCCEEEEECchhhcC-----------
Confidence            99999999752   356778899999999999999999999999993       358999999988776           


Q ss_pred             CCCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccC
Q 025509          158 NDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  211 (251)
Q Consensus       158 ~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  211 (251)
                          +.+++..|+++|+++++|+++|+.|+.+.|  |+||+|+||+++|++.+.
T Consensus       407 ----~~~~~~~Y~asKaal~~l~~~la~e~~~~g--I~vn~v~PG~v~t~~~~~  454 (520)
T PRK06484        407 ----ALPPRNAYCASKAAVTMLSRSLACEWAPAG--IRVNTVAPGYIETPAVLA  454 (520)
T ss_pred             ----CCCCCchhHHHHHHHHHHHHHHHHHhhhhC--eEEEEEEeCCccCchhhh
Confidence                677888999999999999999999999999  999999999999998764

>PRK05650 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.5e-32  Score=230.21  Aligned_cols=188  Identities=21%  Similarity=0.292  Sum_probs=169.1

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      |++|||||++|||++++++|+++|++|++++|+.+++++...++...  +.++.++++|+++++++.++++.+.+.++++
T Consensus         1 ~~vlVtGasggIG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~i   78 (270)
T PRK05650          1 NRVMITGAASGLGRAIALRWAREGWRLALADVNEEGGEETLKLLREA--GGDGFYQRCDVRDYSQLTALAQACEEKWGGI   78 (270)
T ss_pred             CEEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCceEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            68999999999999999999999999999999988888887777654  4578899999999999999999999888999


Q ss_pred             eEEEEcCCCCCC--CCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccccCC
Q 025509           81 NILINNAGIMGT--PFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKIN  158 (251)
Q Consensus        81 d~lv~~ag~~~~--~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~  158 (251)
                      |+||||||...+  ..+.+.+++++.+++|+.+++.+++.++|.|.++     +.++||++||..+..            
T Consensus        79 d~lI~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-----~~~~iv~vsS~~~~~------------  141 (270)
T PRK05650         79 DVIVNNAGVASGGFFEELSLEDWDWQIAINLMGVVKGCKAFLPLFKRQ-----KSGRIVNIASMAGLM------------  141 (270)
T ss_pred             CEEEECCCCCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhC-----CCCEEEEECChhhcC------------
Confidence            999999997543  5667789999999999999999999999999875     458999999987765            


Q ss_pred             CCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCC
Q 025509          159 DPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRHN  212 (251)
Q Consensus       159 ~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~~  212 (251)
                         +.++.+.|+++|+++++|+++++.|+.+.|  |++++|+||+++|++.+..
T Consensus       142 ---~~~~~~~Y~~sKaa~~~~~~~l~~e~~~~g--i~v~~v~Pg~v~t~~~~~~  190 (270)
T PRK05650        142 ---QGPAMSSYNVAKAGVVALSETLLVELADDE--IGVHVVCPSFFQTNLLDSF  190 (270)
T ss_pred             ---CCCCchHHHHHHHHHHHHHHHHHHHhcccC--cEEEEEecCccccCccccc
Confidence               677888999999999999999999999888  9999999999999987643

>PRK08936 glucose-1-dehydrogenase; Provisional

Probab=100.00  E-value=3.5e-32  Score=228.23  Aligned_cols=188  Identities=29%  Similarity=0.352  Sum_probs=163.1

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCc-hhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCC
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDI-AAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQ   79 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~-~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~   79 (251)
                      |++|||||++|||+++|++|+++|++|++++|+. +......+++...  +.++.++.+|+++.+++.++++.+.+.+++
T Consensus         8 k~~lItGa~~gIG~~ia~~l~~~G~~vvi~~~~~~~~~~~~~~~l~~~--~~~~~~~~~Dl~~~~~i~~~~~~~~~~~g~   85 (261)
T PRK08936          8 KVVVITGGSTGLGRAMAVRFGKEKAKVVINYRSDEEEANDVAEEIKKA--GGEAIAVKGDVTVESDVVNLIQTAVKEFGT   85 (261)
T ss_pred             CEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHc--CCeEEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence            6899999999999999999999999999988854 4455555555443  456888999999999999999999988999


Q ss_pred             eeEEEEcCCCCCC--CCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccccC
Q 025509           80 LNILINNAGIMGT--PFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKI  157 (251)
Q Consensus        80 id~lv~~ag~~~~--~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~  157 (251)
                      +|++|||||...+  ..+.+.++|++.+++|+.+++.+++.++++|.++.    ..|+||++||..+..           
T Consensus        86 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~~----~~g~iv~~sS~~~~~-----------  150 (261)
T PRK08936         86 LDVMINNAGIENAVPSHEMSLEDWNKVINTNLTGAFLGSREAIKYFVEHD----IKGNIINMSSVHEQI-----------  150 (261)
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC----CCcEEEEEccccccC-----------
Confidence            9999999997533  45677889999999999999999999999998751    258999999976554           


Q ss_pred             CCCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccC
Q 025509          158 NDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  211 (251)
Q Consensus       158 ~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  211 (251)
                          +.+.+..|+++|+|+++|+++++.|+.+.|  |+|++|+||+++|++...
T Consensus       151 ----~~~~~~~Y~~sKaa~~~~~~~la~e~~~~g--i~v~~v~pg~v~t~~~~~  198 (261)
T PRK08936        151 ----PWPLFVHYAASKGGVKLMTETLAMEYAPKG--IRVNNIGPGAINTPINAE  198 (261)
T ss_pred             ----CCCCCcccHHHHHHHHHHHHHHHHHHhhcC--eEEEEEEECcCCCCcccc
Confidence                677888999999999999999999999988  999999999999998653

>TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase

Probab=100.00  E-value=4.8e-33  Score=233.66  Aligned_cols=182  Identities=21%  Similarity=0.275  Sum_probs=155.8

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      |+++||||++|||+++|++|+++|++|++++|+.+.++++.+    .. +..+.++.+|+++.+++.++++++.+.++++
T Consensus         6 k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~l~~----~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i   80 (262)
T TIGR03325         6 EVVLVTGGASGLGRAIVDRFVAEGARVAVLDKSAAGLQELEA----AH-GDAVVGVEGDVRSLDDHKEAVARCVAAFGKI   80 (262)
T ss_pred             cEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHh----hc-CCceEEEEeccCCHHHHHHHHHHHHHHhCCC
Confidence            589999999999999999999999999999998776655433    22 4468889999999999999999999899999


Q ss_pred             eEEEEcCCCCC---CCCcCCc----hhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcc
Q 025509           81 NILINNAGIMG---TPFMLSK----DNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIR  153 (251)
Q Consensus        81 d~lv~~ag~~~---~~~~~~~----~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~  153 (251)
                      |+||||||...   +..+.+.    ++|++.+++|+.+++.++++++|+|.++      .|++|+++|..+..       
T Consensus        81 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~------~g~iv~~sS~~~~~-------  147 (262)
T TIGR03325        81 DCLIPNAGIWDYSTALVDIPDDRIDEAFDEVFHINVKGYLLAVKAALPALVAS------RGSVIFTISNAGFY-------  147 (262)
T ss_pred             CEEEECCCCCccCCccccCCchhhhHHHHHhheeecHhHHHHHHHHHHHHhhc------CCCEEEEeccceec-------
Confidence            99999999642   2333333    4789999999999999999999999763      47899999987665       


Q ss_pred             cccCCCCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccC
Q 025509          154 FDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  211 (251)
Q Consensus       154 ~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  211 (251)
                              +.++...|+++|+|+++|+++++.|+++ .  |+||+|+||++.|++...
T Consensus       148 --------~~~~~~~Y~~sKaa~~~l~~~la~e~~~-~--irvn~i~PG~i~t~~~~~  194 (262)
T TIGR03325       148 --------PNGGGPLYTAAKHAVVGLVKELAFELAP-Y--VRVNGVAPGGMSSDLRGP  194 (262)
T ss_pred             --------CCCCCchhHHHHHHHHHHHHHHHHhhcc-C--eEEEEEecCCCcCCCccc
Confidence                    5566779999999999999999999986 3  999999999999998653

Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase.

>PRK05855 short chain dehydrogenase; Validated

Probab=100.00  E-value=6.3e-33  Score=256.63  Aligned_cols=189  Identities=30%  Similarity=0.350  Sum_probs=170.5

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      +++|||||++|||+++|++|+++|++|++++|+.++++++.+.+.+.  +.++.++.+|++++++++++++++.+.+|++
T Consensus       316 ~~~lv~G~s~giG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~i  393 (582)
T PRK05855        316 KLVVVTGAGSGIGRETALAFAREGAEVVASDIDEAAAERTAELIRAA--GAVAHAYRVDVSDADAMEAFAEWVRAEHGVP  393 (582)
T ss_pred             CEEEEECCcCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCeEEEEEcCCCCHHHHHHHHHHHHHhcCCC
Confidence            47999999999999999999999999999999988888887777554  4578999999999999999999999999999


Q ss_pred             eEEEEcCCCCC--CCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccccCC
Q 025509           81 NILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKIN  158 (251)
Q Consensus        81 d~lv~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~  158 (251)
                      |+||||||+..  +..+.+.++++.++++|+.|++.++++++|+|++++    ..|+||++||.++..            
T Consensus       394 d~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~----~~g~iv~~sS~~~~~------------  457 (582)
T PRK05855        394 DIVVNNAGIGMAGGFLDTSAEDWDRVLDVNLWGVIHGCRLFGRQMVERG----TGGHIVNVASAAAYA------------  457 (582)
T ss_pred             cEEEECCccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC----CCcEEEEECChhhcc------------
Confidence            99999999753  356778899999999999999999999999998851    258999999988776            


Q ss_pred             CCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCC
Q 025509          159 DPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRHN  212 (251)
Q Consensus       159 ~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~~  212 (251)
                         +.++...|++||+|+++|+++|+.|+.+.|  |+|++|+||+|+|++.+..
T Consensus       458 ---~~~~~~~Y~~sKaa~~~~~~~l~~e~~~~g--i~v~~v~Pg~v~t~~~~~~  506 (582)
T PRK05855        458 ---PSRSLPAYATSKAAVLMLSECLRAELAAAG--IGVTAICPGFVDTNIVATT  506 (582)
T ss_pred             ---CCCCCcHHHHHHHHHHHHHHHHHHHhcccC--cEEEEEEeCCCcccchhcc
Confidence               667788999999999999999999999999  9999999999999997754

>PRK05993 short chain dehydrogenase; Provisional

Probab=100.00  E-value=6e-33  Score=235.01  Aligned_cols=181  Identities=28%  Similarity=0.337  Sum_probs=159.3

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcC-CC
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQH-HQ   79 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~-g~   79 (251)
                      |++|||||++|||+++|++|+++|++|++++|+.+.++++.+        ..+.++.+|++|.++++.+++++.+.+ ++
T Consensus         5 k~vlItGasggiG~~la~~l~~~G~~Vi~~~r~~~~~~~l~~--------~~~~~~~~Dl~d~~~~~~~~~~~~~~~~g~   76 (277)
T PRK05993          5 RSILITGCSSGIGAYCARALQSDGWRVFATCRKEEDVAALEA--------EGLEAFQLDYAEPESIAALVAQVLELSGGR   76 (277)
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH--------CCceEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            579999999999999999999999999999998776554321        247789999999999999999986655 68


Q ss_pred             eeEEEEcCCCCC--CCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccccC
Q 025509           80 LNILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKI  157 (251)
Q Consensus        80 id~lv~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~  157 (251)
                      +|+||||||...  +..+.+.++++..+++|+.|++.+++.++|.|.++     +.++||++||..+..           
T Consensus        77 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~l~~~~~~-----~~g~iv~isS~~~~~-----------  140 (277)
T PRK05993         77 LDALFNNGAYGQPGAVEDLPTEALRAQFEANFFGWHDLTRRVIPVMRKQ-----GQGRIVQCSSILGLV-----------  140 (277)
T ss_pred             ccEEEECCCcCCCCCcccCCHHHHHHHHhHHhHHHHHHHHHHHHHHhhc-----CCCEEEEECChhhcC-----------
Confidence            999999999753  35667889999999999999999999999999875     468999999987765           


Q ss_pred             CCCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccC
Q 025509          158 NDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  211 (251)
Q Consensus       158 ~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  211 (251)
                          +.+....|++||+++++|+++++.|+.+.|  |+|++|+||+++|++.+.
T Consensus       141 ----~~~~~~~Y~asK~a~~~~~~~l~~el~~~g--i~v~~v~Pg~v~T~~~~~  188 (277)
T PRK05993        141 ----PMKYRGAYNASKFAIEGLSLTLRMELQGSG--IHVSLIEPGPIETRFRAN  188 (277)
T ss_pred             ----CCCccchHHHHHHHHHHHHHHHHHHhhhhC--CEEEEEecCCccCchhhH
Confidence                567778999999999999999999999999  999999999999998764

>TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase

Probab=100.00  E-value=9.3e-33  Score=229.76  Aligned_cols=186  Identities=25%  Similarity=0.310  Sum_probs=160.3

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      |++|||||++|||.++|++|+++|++|++++|+.  ..+..+.+.+.  +..+.++.+|+++.+++..+++++.+.++++
T Consensus         6 k~vlItGas~gIG~~ia~~l~~~G~~vi~~~r~~--~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   81 (248)
T TIGR01832         6 KVALVTGANTGLGQGIAVGLAEAGADIVGAGRSE--PSETQQQVEAL--GRRFLSLTADLSDIEAIKALVDSAVEEFGHI   81 (248)
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCCEEEEEcCch--HHHHHHHHHhc--CCceEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence            6899999999999999999999999999999975  23444444332  4568899999999999999999998888999


Q ss_pred             eEEEEcCCCCCC--CCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccccCC
Q 025509           81 NILINNAGIMGT--PFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKIN  158 (251)
Q Consensus        81 d~lv~~ag~~~~--~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~  158 (251)
                      |++|||||...+  ..+.+.++|++++++|+.+++.++++++|+|.++.    ..++||++||..+..            
T Consensus        82 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~----~~g~iv~~sS~~~~~------------  145 (248)
T TIGR01832        82 DILVNNAGIIRRADAEEFSEKDWDDVMNVNLKSVFFLTQAAAKHFLKQG----RGGKIINIASMLSFQ------------  145 (248)
T ss_pred             CEEEECCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcC----CCeEEEEEecHHhcc------------
Confidence            999999997542  45667889999999999999999999999998741    257999999987654            


Q ss_pred             CCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccC
Q 025509          159 DPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  211 (251)
Q Consensus       159 ~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  211 (251)
                         +.+....|+.+|+++++++++++.|+.++|  |+||+|+||+++|++.+.
T Consensus       146 ---~~~~~~~Y~~sKaa~~~~~~~la~e~~~~g--i~v~~v~pg~v~t~~~~~  193 (248)
T TIGR01832       146 ---GGIRVPSYTASKHGVAGLTKLLANEWAAKG--INVNAIAPGYMATNNTQA  193 (248)
T ss_pred             ---CCCCCchhHHHHHHHHHHHHHHHHHhCccC--cEEEEEEECcCcCcchhc
Confidence               455667899999999999999999999999  999999999999998754

This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation.

>PRK07523 gluconate 5-dehydrogenase; Provisional

Probab=100.00  E-value=1.2e-32  Score=230.16  Aligned_cols=187  Identities=25%  Similarity=0.342  Sum_probs=167.2

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      |++|||||++|||+++|++|+++|++|++++|++.+.++..+.+.+.  +.++.++++|+++.++++++++++.+.++++
T Consensus        11 k~vlItGa~g~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~i~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   88 (255)
T PRK07523         11 RRALVTGSSQGIGYALAEGLAQAGAEVILNGRDPAKLAAAAESLKGQ--GLSAHALAFDVTDHDAVRAAIDAFEAEIGPI   88 (255)
T ss_pred             CEEEEECCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhc--CceEEEEEccCCCHHHHHHHHHHHHHhcCCC
Confidence            68999999999999999999999999999999988877777666543  4568899999999999999999999999999


Q ss_pred             eEEEEcCCCCC--CCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccccCC
Q 025509           81 NILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKIN  158 (251)
Q Consensus        81 d~lv~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~  158 (251)
                      |+||||||...  +..+.+.++|++.+++|+.+++.+++++.+.|.++     +.++||++||..+..            
T Consensus        89 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-----~~g~iv~iss~~~~~------------  151 (255)
T PRK07523         89 DILVNNAGMQFRTPLEDFPADAFERLLRTNISSVFYVGQAVARHMIAR-----GAGKIINIASVQSAL------------  151 (255)
T ss_pred             CEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHh-----CCeEEEEEccchhcc------------
Confidence            99999999753  35567889999999999999999999999999875     468999999976654            


Q ss_pred             CCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccC
Q 025509          159 DPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  211 (251)
Q Consensus       159 ~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  211 (251)
                         +.+++..|+++|++++.++++++.|+.++|  |+||+|+||+++|++...
T Consensus       152 ---~~~~~~~y~~sK~a~~~~~~~~a~e~~~~g--i~v~~i~pg~~~t~~~~~  199 (255)
T PRK07523        152 ---ARPGIAPYTATKGAVGNLTKGMATDWAKHG--LQCNAIAPGYFDTPLNAA  199 (255)
T ss_pred             ---CCCCCccHHHHHHHHHHHHHHHHHHhhHhC--eEEEEEEECcccCchhhh
Confidence               567788999999999999999999999999  999999999999998654

>PRK06194 hypothetical protein; Provisional

Probab=100.00  E-value=1.5e-32  Score=233.38  Aligned_cols=194  Identities=25%  Similarity=0.233  Sum_probs=167.5

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      |++|||||++|||+++|++|+++|++|++++|+.+.+++..+++...  +.++.++.+|++|.++++++++.+.+.++++
T Consensus         7 k~vlVtGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~d~~~~~~~~~~~~~~~g~i   84 (287)
T PRK06194          7 KVAVITGAASGFGLAFARIGAALGMKLVLADVQQDALDRAVAELRAQ--GAEVLGVRTDVSDAAQVEALADAALERFGAV   84 (287)
T ss_pred             CEEEEeCCccHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhc--CCeEEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence            57999999999999999999999999999999988777777766543  4568889999999999999999999999999


Q ss_pred             eEEEEcCCCCCC--CCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhcc-CCCCceEEEEcCccccccccCCcccccC
Q 025509           81 NILINNAGIMGT--PFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARK-SGGEGRIINVSSEGHRLAYHEGIRFDKI  157 (251)
Q Consensus        81 d~lv~~ag~~~~--~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~-~~~~g~iv~vsS~~~~~~~~~~~~~~~~  157 (251)
                      |+||||||....  ..+.+.++|+..+++|+.+++.++++++|.|+++++. ....++||++||.++..           
T Consensus        85 d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~-----------  153 (287)
T PRK06194         85 HLLFNNAGVGAGGLVWENSLADWEWVLGVNLWGVIHGVRAFTPLMLAAAEKDPAYEGHIVNTASMAGLL-----------  153 (287)
T ss_pred             CEEEECCCCCCCCCcccCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCCCCCCeEEEEeCChhhcc-----------
Confidence            999999997643  4567889999999999999999999999999886321 01127999999988776           


Q ss_pred             CCCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccC
Q 025509          158 NDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  211 (251)
Q Consensus       158 ~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  211 (251)
                          +.++...|+++|+++++|+++++.++...+..|+++.|+||++.|++...
T Consensus       154 ----~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~irv~~v~pg~i~t~~~~~  203 (287)
T PRK06194        154 ----APPAMGIYNVSKHAVVSLTETLYQDLSLVTDQVGASVLCPYFVPTGIWQS  203 (287)
T ss_pred             ----CCCCCcchHHHHHHHHHHHHHHHHHHhhcCCCeEEEEEEeCcccCccccc
Confidence                55677899999999999999999999865555999999999999998754

>PRK12743 oxidoreductase; Provisional

Probab=100.00  E-value=1.8e-32  Score=229.46  Aligned_cols=188  Identities=29%  Similarity=0.362  Sum_probs=163.8

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEec-CchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCC
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVR-DIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQ   79 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r-~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~   79 (251)
                      |++|||||++|||+++|++|+++|++|+++.+ +.+.++...+++...  +.++.++.+|++++++++++++++.+.+++
T Consensus         3 k~vlItGas~giG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   80 (256)
T PRK12743          3 QVAIVTASDSGIGKACALLLAQQGFDIGITWHSDEEGAKETAEEVRSH--GVRAEIRQLDLSDLPEGAQALDKLIQRLGR   80 (256)
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhc--CCceEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            68999999999999999999999999988865 555566666655443  567899999999999999999999999999


Q ss_pred             eeEEEEcCCCCCC--CCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccccC
Q 025509           80 LNILINNAGIMGT--PFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKI  157 (251)
Q Consensus        80 id~lv~~ag~~~~--~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~  157 (251)
                      +|++|||+|....  ..+.+.++|++.+++|+.+++.+++++.++|.+++    ..|+||++||..+..           
T Consensus        81 id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~----~~g~ii~isS~~~~~-----------  145 (256)
T PRK12743         81 IDVLVNNAGAMTKAPFLDMDFDEWRKIFTVDVDGAFLCSQIAARHMVKQG----QGGRIINITSVHEHT-----------  145 (256)
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC----CCeEEEEEeeccccC-----------
Confidence            9999999997542  45678899999999999999999999999997642    357999999976654           


Q ss_pred             CCCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccC
Q 025509          158 NDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  211 (251)
Q Consensus       158 ~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  211 (251)
                          +.+++..|+++|+++++++++++.++.++|  |+++.|+||+++|++...
T Consensus       146 ----~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~--i~v~~v~Pg~~~t~~~~~  193 (256)
T PRK12743        146 ----PLPGASAYTAAKHALGGLTKAMALELVEHG--ILVNAVAPGAIATPMNGM  193 (256)
T ss_pred             ----CCCCcchhHHHHHHHHHHHHHHHHHhhhhC--eEEEEEEeCCccCccccc
Confidence                667788999999999999999999999999  999999999999998754

>PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional

Probab=100.00  E-value=2e-32  Score=229.35  Aligned_cols=182  Identities=26%  Similarity=0.266  Sum_probs=157.4

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      |++|||||++|||+++|++|+++|++|++++|++ ...+..+++.+.  +.++.++.+|+++.+++.++++++.+.++++
T Consensus         9 k~vlVtGas~gIG~~la~~l~~~G~~v~~~~r~~-~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   85 (260)
T PRK12823          9 KVVVVTGAAQGIGRGVALRAAAEGARVVLVDRSE-LVHEVAAELRAA--GGEALALTADLETYAGAQAAMAAAVEAFGRI   85 (260)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCch-HHHHHHHHHHhc--CCeEEEEEEeCCCHHHHHHHHHHHHHHcCCC
Confidence            5799999999999999999999999999999985 344555555432  4568889999999999999999999999999


Q ss_pred             eEEEEcCCCC---CCCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccccC
Q 025509           81 NILINNAGIM---GTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKI  157 (251)
Q Consensus        81 d~lv~~ag~~---~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~  157 (251)
                      |+||||||..   .+..+.+.++|++.+++|+.+++.+++.++|+|+++     +.++||++||..+..           
T Consensus        86 d~lv~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-----~~g~iv~~sS~~~~~-----------  149 (260)
T PRK12823         86 DVLINNVGGTIWAKPFEEYEEEQIEAEIRRSLFPTLWCCRAVLPHMLAQ-----GGGAIVNVSSIATRG-----------  149 (260)
T ss_pred             eEEEECCccccCCCChhhCChHHHHHHHHHHhHHHHHHHHHHHHHHHhc-----CCCeEEEEcCccccC-----------
Confidence            9999999953   345677889999999999999999999999999875     457999999976431           


Q ss_pred             CCCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcc
Q 025509          158 NDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNII  209 (251)
Q Consensus       158 ~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~  209 (251)
                            +...+|+++|+|+++|+++++.|+.+.|  |+|++|+||+++||+.
T Consensus       150 ------~~~~~Y~~sK~a~~~~~~~la~e~~~~g--i~v~~v~Pg~v~t~~~  193 (260)
T PRK12823        150 ------INRVPYSAAKGGVNALTASLAFEYAEHG--IRVNAVAPGGTEAPPR  193 (260)
T ss_pred             ------CCCCccHHHHHHHHHHHHHHHHHhcccC--cEEEEEecCccCCcch
Confidence                  2345799999999999999999999988  9999999999999863

>PRK07904 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.3e-32  Score=230.10  Aligned_cols=188  Identities=19%  Similarity=0.179  Sum_probs=159.7

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcC-CEEEEEecCchh-HHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCC
Q 025509            1 MDIVITGATSGIGTETARVLALRG-VHVVMGVRDIAA-GKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHH   78 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G-~~Vi~~~r~~~~-~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g   78 (251)
                      |++|||||++|||+++|++|+++| ++|++++|+.+. ++++.+++.+.. +.++.++++|++|.++++++++++.+ ++
T Consensus         9 ~~vlItGas~giG~~la~~l~~~gg~~V~~~~r~~~~~~~~~~~~l~~~~-~~~v~~~~~D~~~~~~~~~~~~~~~~-~g   86 (253)
T PRK07904          9 QTILLLGGTSEIGLAICERYLKNAPARVVLAALPDDPRRDAAVAQMKAAG-ASSVEVIDFDALDTDSHPKVIDAAFA-GG   86 (253)
T ss_pred             cEEEEEcCCcHHHHHHHHHHHhcCCCeEEEEeCCcchhHHHHHHHHHhcC-CCceEEEEecCCChHHHHHHHHHHHh-cC
Confidence            579999999999999999999985 899999999876 777777776542 34689999999999999999998876 47


Q ss_pred             CeeEEEEcCCCCCCCC--cCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCccccc
Q 025509           79 QLNILINNAGIMGTPF--MLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDK  156 (251)
Q Consensus        79 ~id~lv~~ag~~~~~~--~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~  156 (251)
                      ++|++|+|+|...+..  ..+.++..+.+++|+.+++.+++.++|.|.++     +.++||++||..+..          
T Consensus        87 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~l~~~~~~~-----~~~~iv~isS~~g~~----------  151 (253)
T PRK07904         87 DVDVAIVAFGLLGDAEELWQNQRKAVQIAEINYTAAVSVGVLLGEKMRAQ-----GFGQIIAMSSVAGER----------  151 (253)
T ss_pred             CCCEEEEeeecCCchhhcccCHHHHHHHHHHHhHhHHHHHHHHHHHHHhc-----CCceEEEEechhhcC----------
Confidence            9999999999864321  12334455789999999999999999999875     468999999987654          


Q ss_pred             CCCCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCC
Q 025509          157 INDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRHN  212 (251)
Q Consensus       157 ~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~~  212 (251)
                           +.++...|++||+++.+|+++++.|+.+.|  |+|++|+||+++|++....
T Consensus       152 -----~~~~~~~Y~~sKaa~~~~~~~l~~el~~~~--i~v~~v~Pg~v~t~~~~~~  200 (253)
T PRK07904        152 -----VRRSNFVYGSTKAGLDGFYLGLGEALREYG--VRVLVVRPGQVRTRMSAHA  200 (253)
T ss_pred             -----CCCCCcchHHHHHHHHHHHHHHHHHHhhcC--CEEEEEeeCceecchhccC
Confidence                 455667899999999999999999999999  9999999999999987753

>PRK06182 short chain dehydrogenase; Validated

Probab=100.00  E-value=4.5e-32  Score=229.03  Aligned_cols=180  Identities=30%  Similarity=0.361  Sum_probs=158.9

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      |+++||||++|||++++++|+++|++|++++|+.+++++...        ..+.++.+|+++.++++++++++.+.++++
T Consensus         4 k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~l~~~~~--------~~~~~~~~Dv~~~~~~~~~~~~~~~~~~~i   75 (273)
T PRK06182          4 KVALVTGASSGIGKATARRLAAQGYTVYGAARRVDKMEDLAS--------LGVHPLSLDVTDEASIKAAVDTIIAEEGRI   75 (273)
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHh--------CCCeEEEeeCCCHHHHHHHHHHHHHhcCCC
Confidence            589999999999999999999999999999998776544321        247889999999999999999999889999


Q ss_pred             eEEEEcCCCCC--CCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccccCC
Q 025509           81 NILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKIN  158 (251)
Q Consensus        81 d~lv~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~  158 (251)
                      |+||||||...  ++.+.+.++++..+++|+.+++.+++.++|.|+++     +.++||++||.++..            
T Consensus        76 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~-----~~g~iv~isS~~~~~------------  138 (273)
T PRK06182         76 DVLVNNAGYGSYGAIEDVPIDEARRQFEVNLFGAARLTQLVLPHMRAQ-----RSGRIINISSMGGKI------------  138 (273)
T ss_pred             CEEEECCCcCCCCchhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHhc-----CCCEEEEEcchhhcC------------
Confidence            99999999753  35677889999999999999999999999999875     458999999977654            


Q ss_pred             CCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCccc
Q 025509          159 DPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIR  210 (251)
Q Consensus       159 ~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~  210 (251)
                         +.+....|+++|+++++|+++++.|+.+.|  |++++|+||+++|++..
T Consensus       139 ---~~~~~~~Y~~sKaa~~~~~~~l~~e~~~~g--i~v~~v~Pg~v~t~~~~  185 (273)
T PRK06182        139 ---YTPLGAWYHATKFALEGFSDALRLEVAPFG--IDVVVIEPGGIKTEWGD  185 (273)
T ss_pred             ---CCCCccHhHHHHHHHHHHHHHHHHHhcccC--CEEEEEecCCcccccch
Confidence               455667899999999999999999999988  99999999999999753

>PRK07067 sorbitol dehydrogenase; Provisional

Probab=100.00  E-value=1.7e-32  Score=229.53  Aligned_cols=185  Identities=27%  Similarity=0.355  Sum_probs=163.7

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      |++|||||++|||.++|++|+++|++|++++|+....++..+++     +..+.++++|+++.++++++++++.+.++++
T Consensus         7 ~~vlItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   81 (257)
T PRK07067          7 KVALLTGAASGIGEAVAERYLAEGARVVIADIKPARARLAALEI-----GPAAIAVSLDVTRQDSIDRIVAAAVERFGGI   81 (257)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHh-----CCceEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            57999999999999999999999999999999987777665544     3458889999999999999999999899999


Q ss_pred             eEEEEcCCCCC--CCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccccCC
Q 025509           81 NILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKIN  158 (251)
Q Consensus        81 d~lv~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~  158 (251)
                      |++|||||...  ++.+.+.++++..+++|+.+++.+++++++++.++.    ..++||++||..+..            
T Consensus        82 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~----~~~~iv~~sS~~~~~------------  145 (257)
T PRK07067         82 DILFNNAALFDMAPILDISRDSYDRLFAVNVKGLFFLMQAVARHMVEQG----RGGKIINMASQAGRR------------  145 (257)
T ss_pred             CEEEECCCcCCCCCcccCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhcC----CCcEEEEeCCHHhCC------------
Confidence            99999999753  355678899999999999999999999999997741    257999999977665            


Q ss_pred             CCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccC
Q 025509          159 DPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  211 (251)
Q Consensus       159 ~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  211 (251)
                         +.+++..|++||++++.|+++++.|+.++|  |+|++|.||+++|++.+.
T Consensus       146 ---~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g--i~v~~i~pg~v~t~~~~~  193 (257)
T PRK07067        146 ---GEALVSHYCATKAAVISYTQSAALALIRHG--INVNAIAPGVVDTPMWDQ  193 (257)
T ss_pred             ---CCCCCchhhhhHHHHHHHHHHHHHHhcccC--eEEEEEeeCcccchhhhh
Confidence               567788999999999999999999999988  999999999999998654

>PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=6.4e-32  Score=225.16  Aligned_cols=184  Identities=22%  Similarity=0.297  Sum_probs=154.9

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEec-CchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCC
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVR-DIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQ   79 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r-~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~   79 (251)
                      |++|||||++|||+++|+.|+++|++|+++.+ +.+..++...++     +.++.++++|+++++++.++++++.+.+++
T Consensus         6 k~ilItGas~gIG~~la~~l~~~G~~vv~~~~~~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   80 (253)
T PRK08642          6 QTVLVTGGSRGLGAAIARAFAREGARVVVNYHQSEDAAEALADEL-----GDRAIALQADVTDREQVQAMFATATEHFGK   80 (253)
T ss_pred             CEEEEeCCCCcHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHh-----CCceEEEEcCCCCHHHHHHHHHHHHHHhCC
Confidence            57999999999999999999999999988765 444443333322     356889999999999999999999888887


Q ss_pred             -eeEEEEcCCCC--------CCCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccC
Q 025509           80 -LNILINNAGIM--------GTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHE  150 (251)
Q Consensus        80 -id~lv~~ag~~--------~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~  150 (251)
                       +|++|||||..        .+..+.++++|++.+++|+.+++.++++++|+|..+     ..++||++||..+..    
T Consensus        81 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-----~~g~iv~iss~~~~~----  151 (253)
T PRK08642         81 PITTVVNNALADFSFDGDARKKADDITWEDFQQQLEGSVKGALNTIQAALPGMREQ-----GFGRIINIGTNLFQN----  151 (253)
T ss_pred             CCeEEEECCCccccccccCCCCcccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHhc-----CCeEEEEECCccccC----
Confidence             99999999863        124567889999999999999999999999999764     358999999965433    


Q ss_pred             CcccccCCCCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccC
Q 025509          151 GIRFDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  211 (251)
Q Consensus       151 ~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  211 (251)
                                 +..++.+|+++|+|+++|++++++++.++|  |+||+|+||+++|+....
T Consensus       152 -----------~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~--i~v~~i~pG~v~t~~~~~  199 (253)
T PRK08642        152 -----------PVVPYHDYTTAKAALLGLTRNLAAELGPYG--ITVNMVSGGLLRTTDASA  199 (253)
T ss_pred             -----------CCCCccchHHHHHHHHHHHHHHHHHhCccC--eEEEEEeecccCCchhhc
Confidence                       445667999999999999999999999999  999999999999986553

>PRK07069 short chain dehydrogenase; Validated

Probab=100.00  E-value=4.2e-32  Score=226.01  Aligned_cols=190  Identities=25%  Similarity=0.262  Sum_probs=165.1

Q ss_pred             EEEEECCCChhHHHHHHHHHHcCCEEEEEecC-chhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            2 DIVITGATSGIGTETARVLALRGVHVVMGVRD-IAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         2 ~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~-~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      +++||||++|||+++++.|+++|++|++++|+ .+.+++..+.+.+......+.++++|+++.++++++++++.+.++++
T Consensus         1 ~ilVtG~~~~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   80 (251)
T PRK07069          1 RAFITGAAGGLGRAIARRMAEQGAKVFLTDINDAAGLDAFAAEINAAHGEGVAFAAVQDVTDEAQWQALLAQAADAMGGL   80 (251)
T ss_pred             CEEEECCCChHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCCceEEEEEeecCCHHHHHHHHHHHHHHcCCc
Confidence            38999999999999999999999999999998 66666666666544323346678899999999999999999999999


Q ss_pred             eEEEEcCCCCC--CCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccccCC
Q 025509           81 NILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKIN  158 (251)
Q Consensus        81 d~lv~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~  158 (251)
                      |++|||||...  +..+.+.+++++++++|+.+++.+++.++|.|+++     +.++||++||..+..            
T Consensus        81 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-----~~~~ii~~ss~~~~~------------  143 (251)
T PRK07069         81 SVLVNNAGVGSFGAIEQIELDEWRRVMAINVESIFLGCKHALPYLRAS-----QPASIVNISSVAAFK------------  143 (251)
T ss_pred             cEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhc-----CCcEEEEecChhhcc------------
Confidence            99999999753  35567888999999999999999999999999875     468999999987765            


Q ss_pred             CCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccC
Q 025509          159 DPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  211 (251)
Q Consensus       159 ~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  211 (251)
                         +.+++..|+++|+++++|+++++.|+.+.+.+|+|+.|+||+++|++...
T Consensus       144 ---~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~i~v~~v~pg~v~t~~~~~  193 (251)
T PRK07069        144 ---AEPDYTAYNASKAAVASLTKSIALDCARRGLDVRCNSIHPTFIRTGIVDP  193 (251)
T ss_pred             ---CCCCCchhHHHHHHHHHHHHHHHHHhcccCCcEEEEEEeecccCCcchhH
Confidence               56677899999999999999999999887766999999999999998764

>PF13561 adh_short_C2: Enoyl-(Acyl carrier protein) reductase; PDB: 2UV8_B 3HMJ_A 2VKZ_C 1O5I_A 2P91_C 2OP0_A 2OL4_B 1NHW_A 1NNU_B 2O2Y_B

Probab=100.00  E-value=4.3e-33  Score=231.19  Aligned_cols=179  Identities=37%  Similarity=0.466  Sum_probs=160.6

Q ss_pred             CCC--ChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcC-CCeeEE
Q 025509            7 GAT--SGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQH-HQLNIL   83 (251)
Q Consensus         7 G~s--~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~-g~id~l   83 (251)
                      |++  +|||+++|++|+++|++|++++|+.+++++..+++.+.++ ..  ++++|++++++++++++++.+.+ |++|+|
T Consensus         1 g~~~s~GiG~aia~~l~~~Ga~V~~~~~~~~~~~~~~~~l~~~~~-~~--~~~~D~~~~~~v~~~~~~~~~~~~g~iD~l   77 (241)
T PF13561_consen    1 GAGSSSGIGRAIARALAEEGANVILTDRNEEKLADALEELAKEYG-AE--VIQCDLSDEESVEALFDEAVERFGGRIDIL   77 (241)
T ss_dssp             STSSTSHHHHHHHHHHHHTTEEEEEEESSHHHHHHHHHHHHHHTT-SE--EEESCTTSHHHHHHHHHHHHHHHCSSESEE
T ss_pred             CCCCCCChHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHcC-Cc--eEeecCcchHHHHHHHHHHHhhcCCCeEEE
Confidence            566  9999999999999999999999999988888888887764 33  59999999999999999999999 999999


Q ss_pred             EEcCCCCC------CCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccccC
Q 025509           84 INNAGIMG------TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKI  157 (251)
Q Consensus        84 v~~ag~~~------~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~  157 (251)
                      |||+|...      ++.+.+.++|+..+++|+.+++.+++++.|+|.+       .|+||++||.++..           
T Consensus        78 V~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~gsii~iss~~~~~-----------  139 (241)
T PF13561_consen   78 VNNAGISPPSNVEKPLLDLSEEDWDKTFDINVFSPFLLAQAALPLMKK-------GGSIINISSIAAQR-----------  139 (241)
T ss_dssp             EEEEESCTGGGTSSSGGGSHHHHHHHHHHHHTHHHHHHHHHHHHHHHH-------EEEEEEEEEGGGTS-----------
T ss_pred             EecccccccccCCCChHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhh-------CCCcccccchhhcc-----------
Confidence            99999653      2456778999999999999999999999998876       48999999987665           


Q ss_pred             CCCCCCCcccccchhHHHHHHHHHHHHHHhcc-CCCcEEEEEeeCCcccCCcccCC
Q 025509          158 NDPSGYNGFRAYSQSKLANILHANELARRLKE-DGVDITANSVHPGAIATNIIRHN  212 (251)
Q Consensus       158 ~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~-~g~~i~v~~v~Pg~v~t~~~~~~  212 (251)
                          +.+++..|+++|+|+++|+++||.||++ +|  ||||+|+||++.|++....
T Consensus       140 ----~~~~~~~y~~sKaal~~l~r~lA~el~~~~g--IrVN~V~pG~i~t~~~~~~  189 (241)
T PF13561_consen  140 ----PMPGYSAYSASKAALEGLTRSLAKELAPKKG--IRVNAVSPGPIETPMTERI  189 (241)
T ss_dssp             ----BSTTTHHHHHHHHHHHHHHHHHHHHHGGHGT--EEEEEEEESSBSSHHHHHH
T ss_pred             ----cCccchhhHHHHHHHHHHHHHHHHHhccccC--eeeeeecccceeccchhcc
Confidence                6778889999999999999999999999 99  9999999999999986543

...

>PRK08278 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.4e-32  Score=230.87  Aligned_cols=187  Identities=24%  Similarity=0.287  Sum_probs=160.4

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchh-------HHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHH
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAA-------GKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEY   73 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~-------~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~   73 (251)
                      |++|||||++|||+++|+.|+++|++|++++|+.+.       +++..+++.+.  +.++.++++|+++.+++.++++++
T Consensus         7 k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~--~~~~~~~~~D~~~~~~i~~~~~~~   84 (273)
T PRK08278          7 KTLFITGASRGIGLAIALRAARDGANIVIAAKTAEPHPKLPGTIHTAAEEIEAA--GGQALPLVGDVRDEDQVAAAVAKA   84 (273)
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCCEEEEEecccccccchhhHHHHHHHHHHhc--CCceEEEEecCCCHHHHHHHHHHH
Confidence            579999999999999999999999999999997653       33444444432  457889999999999999999999


Q ss_pred             HhcCCCeeEEEEcCCCCC--CCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCC
Q 025509           74 NIQHHQLNILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEG  151 (251)
Q Consensus        74 ~~~~g~id~lv~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~  151 (251)
                      .+.++++|+||||||...  +..+.+.++|++.+++|+.+++.++++++|+|+++     +.++|+++||..+..     
T Consensus        85 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~-----~~g~iv~iss~~~~~-----  154 (273)
T PRK08278         85 VERFGGIDICVNNASAINLTGTEDTPMKRFDLMQQINVRGTFLVSQACLPHLKKS-----ENPHILTLSPPLNLD-----  154 (273)
T ss_pred             HHHhCCCCEEEECCCCcCCCCcccCCHHHHHHHHHHhchHHHHHHHHHHHHHHhc-----CCCEEEEECCchhcc-----
Confidence            888899999999999753  35567889999999999999999999999999875     468999999875443     


Q ss_pred             cccccCCCCCCC--CcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCC-cccCCcccC
Q 025509          152 IRFDKINDPSGY--NGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPG-AIATNIIRH  211 (251)
Q Consensus       152 ~~~~~~~~~~~~--~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg-~v~t~~~~~  211 (251)
                                +.  +++.+|++||+|++.|+++++.|+.++|  |+||+|+|| +++|++.+.
T Consensus       155 ----------~~~~~~~~~Y~~sK~a~~~~~~~la~el~~~~--I~v~~i~Pg~~i~t~~~~~  205 (273)
T PRK08278        155 ----------PKWFAPHTAYTMAKYGMSLCTLGLAEEFRDDG--IAVNALWPRTTIATAAVRN  205 (273)
T ss_pred             ----------ccccCCcchhHHHHHHHHHHHHHHHHHhhhcC--cEEEEEeCCCccccHHHHh
Confidence                      33  6778999999999999999999999988  999999999 689986553

>PRK05717 oxidoreductase; Validated

Probab=100.00  E-value=9.1e-32  Score=224.94  Aligned_cols=182  Identities=27%  Similarity=0.277  Sum_probs=158.7

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      |++|||||++|||+++|++|+++|++|++++|++.+.++..+++     +..+.++++|+++.+++.++++++.+.+|++
T Consensus        11 k~vlItG~sg~IG~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~-----~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~i   85 (255)
T PRK05717         11 RVALVTGAARGIGLGIAAWLIAEGWQVVLADLDRERGSKVAKAL-----GENAWFIAMDVADEAQVAAGVAEVLGQFGRL   85 (255)
T ss_pred             CEEEEeCCcchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHc-----CCceEEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence            68999999999999999999999999999999876665544332     4568899999999999999999999889999


Q ss_pred             eEEEEcCCCCC----CCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCccccc
Q 025509           81 NILINNAGIMG----TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDK  156 (251)
Q Consensus        81 d~lv~~ag~~~----~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~  156 (251)
                      |++|||||...    +..+.+.++|++.+++|+.+++.+++++.|+|.+.      .++||++||..+..          
T Consensus        86 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~------~g~ii~~sS~~~~~----------  149 (255)
T PRK05717         86 DALVCNAAIADPHNTTLESLSLAHWNRVLAVNLTGPMLLAKHCAPYLRAH------NGAIVNLASTRARQ----------  149 (255)
T ss_pred             CEEEECCCcccCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc------CcEEEEEcchhhcC----------
Confidence            99999999753    24456888999999999999999999999998763      57999999987765          


Q ss_pred             CCCCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccC
Q 025509          157 INDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  211 (251)
Q Consensus       157 ~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  211 (251)
                           +.+.+.+|+++|+|+++++++++.++.+ +  |+|++|+||+++|++...
T Consensus       150 -----~~~~~~~Y~~sKaa~~~~~~~la~~~~~-~--i~v~~i~Pg~i~t~~~~~  196 (255)
T PRK05717        150 -----SEPDTEAYAASKGGLLALTHALAISLGP-E--IRVNAVSPGWIDARDPSQ  196 (255)
T ss_pred             -----CCCCCcchHHHHHHHHHHHHHHHHHhcC-C--CEEEEEecccCcCCcccc
Confidence                 5567789999999999999999999975 4  999999999999998543

>PRK07832 short chain dehydrogenase; Provisional

Probab=100.00  E-value=4.8e-32  Score=228.84  Aligned_cols=189  Identities=26%  Similarity=0.320  Sum_probs=165.5

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      |+++||||++|||.+++++|+++|++|++++|+.+.+++..+++.... +..+.++++|++++++++++++++.+.++++
T Consensus         1 k~vlItGas~giG~~la~~la~~G~~vv~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   79 (272)
T PRK07832          1 KRCFVTGAASGIGRATALRLAAQGAELFLTDRDADGLAQTVADARALG-GTVPEHRALDISDYDAVAAFAADIHAAHGSM   79 (272)
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC-CCcceEEEeeCCCHHHHHHHHHHHHHhcCCC
Confidence            689999999999999999999999999999999887777777665432 3345668999999999999999998888999


Q ss_pred             eEEEEcCCCCC--CCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccccCC
Q 025509           81 NILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKIN  158 (251)
Q Consensus        81 d~lv~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~  158 (251)
                      |+||||+|...  +..+.+.++++..+++|+.+++.++++++|.|.++.    ..++||++||..+..            
T Consensus        80 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~----~~g~ii~isS~~~~~------------  143 (272)
T PRK07832         80 DVVMNIAGISAWGTVDRLTHEQWRRMVDVNLMGPIHVIETFVPPMVAAG----RGGHLVNVSSAAGLV------------  143 (272)
T ss_pred             CEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC----CCcEEEEEccccccC------------
Confidence            99999999643  356788899999999999999999999999997641    357999999987654            


Q ss_pred             CCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccC
Q 025509          159 DPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  211 (251)
Q Consensus       159 ~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  211 (251)
                         +.+.+..|+++|+++++|+++++.|+.+.|  |+|+.|+||+++|++++.
T Consensus       144 ---~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~--i~v~~v~Pg~v~t~~~~~  191 (272)
T PRK07832        144 ---ALPWHAAYSASKFGLRGLSEVLRFDLARHG--IGVSVVVPGAVKTPLVNT  191 (272)
T ss_pred             ---CCCCCcchHHHHHHHHHHHHHHHHHhhhcC--cEEEEEecCcccCcchhc
Confidence               566778999999999999999999999888  999999999999998765

>TIGR01289 LPOR light-dependent protochlorophyllide reductase

Probab=100.00  E-value=1.1e-31  Score=231.31  Aligned_cols=204  Identities=37%  Similarity=0.565  Sum_probs=164.6

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcC-CEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCC
Q 025509            1 MDIVITGATSGIGTETARVLALRG-VHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQ   79 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G-~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~   79 (251)
                      |++|||||++|||+++|++|+++| ++|++++|+.++++++.+++..  ++..+.++.+|+++.++++++++++.+++++
T Consensus         4 k~vlITGas~GIG~aia~~L~~~G~~~V~l~~r~~~~~~~~~~~l~~--~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~   81 (314)
T TIGR01289         4 PTVIITGASSGLGLYAAKALAATGEWHVIMACRDFLKAEQAAKSLGM--PKDSYTIMHLDLGSLDSVRQFVQQFRESGRP   81 (314)
T ss_pred             CEEEEECCCChHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhcC--CCCeEEEEEcCCCCHHHHHHHHHHHHHhCCC
Confidence            589999999999999999999999 9999999998888777766532  2456888999999999999999999888889


Q ss_pred             eeEEEEcCCCCCC---CCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccC-----C
Q 025509           80 LNILINNAGIMGT---PFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHE-----G  151 (251)
Q Consensus        80 id~lv~~ag~~~~---~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~-----~  151 (251)
                      +|++|||||+..+   ..+.+.++|+.++++|+.+++.++++++|+|++++.   ..++||++||.++......     .
T Consensus        82 iD~lI~nAG~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~---~~g~IV~vsS~~~~~~~~~~~~~~~  158 (314)
T TIGR01289        82 LDALVCNAAVYFPTAKEPRFTADGFELSVGTNHLGHFLLCNLLLDDLKNSPN---KDKRLIIVGSITGNTNTLAGNVPPK  158 (314)
T ss_pred             CCEEEECCCccccCccccccCHHHHHHHHhhhhhHHHHHHHHHHHHHHhCCC---CCCeEEEEecCccccccCCCcCCCc
Confidence            9999999997533   235678899999999999999999999999987411   2479999999876532110     0


Q ss_pred             cccccC-------------CCCCCCCcccccchhHHHHHHHHHHHHHHhc-cCCCcEEEEEeeCCcc-cCCcccC
Q 025509          152 IRFDKI-------------NDPSGYNGFRAYSQSKLANILHANELARRLK-EDGVDITANSVHPGAI-ATNIIRH  211 (251)
Q Consensus       152 ~~~~~~-------------~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~-~~g~~i~v~~v~Pg~v-~t~~~~~  211 (251)
                      ..+.++             ....+..++..|++||+|+..+++.|++++. +.|  |+|++|+||+| .|++.+.
T Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~~~~~~g--i~v~~v~PG~v~~T~l~~~  231 (314)
T TIGR01289       159 ANLGDLSGLAAGFKAPIAMIDGKEFKGAKAYKDSKVCNMLTVRELHRRFHDETG--ITFASLYPGCIADTGLFRE  231 (314)
T ss_pred             ccccccccccccCCCcccccCCCCcchhhhHHHhHHHHHHHHHHHHHHhccCCC--eEEEEecCCcccCCccccc
Confidence            111111             1123445677899999999999999999985 457  99999999999 6998764

This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form.

>PRK06841 short chain dehydrogenase; Provisional

Probab=100.00  E-value=8.6e-32  Score=224.83  Aligned_cols=184  Identities=24%  Similarity=0.338  Sum_probs=160.3

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      |++|||||++|||.++|++|+++|++|++++|+... .+...++    .+..+.++++|++++++++++++++.+.++++
T Consensus        16 k~vlItGas~~IG~~la~~l~~~G~~Vi~~~r~~~~-~~~~~~~----~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~   90 (255)
T PRK06841         16 KVAVVTGGASGIGHAIAELFAAKGARVALLDRSEDV-AEVAAQL----LGGNAKGLVCDVSDSQSVEAAVAAVISAFGRI   90 (255)
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHH-HHHHHHh----hCCceEEEEecCCCHHHHHHHHHHHHHHhCCC
Confidence            579999999999999999999999999999998653 2222222    23457789999999999999999998888999


Q ss_pred             eEEEEcCCCCC--CCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccccCC
Q 025509           81 NILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKIN  158 (251)
Q Consensus        81 d~lv~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~  158 (251)
                      |++|||||...  +..+.+.+++++.+++|+.+++.+++++.|.|.++     ..++||++||..+..            
T Consensus        91 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-----~~~~iv~~sS~~~~~------------  153 (255)
T PRK06841         91 DILVNSAGVALLAPAEDVSEEDWDKTIDINLKGSFLMAQAVGRHMIAA-----GGGKIVNLASQAGVV------------  153 (255)
T ss_pred             CEEEECCCCCCCCChhhCCHHHHHHHHHHhcHHHHHHHHHHHHHHHhc-----CCceEEEEcchhhcc------------
Confidence            99999999753  34566788999999999999999999999999875     468999999987765            


Q ss_pred             CCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccC
Q 025509          159 DPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  211 (251)
Q Consensus       159 ~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  211 (251)
                         +.+.+..|+++|+++++++++++.|+.++|  |+||+|+||+++|++...
T Consensus       154 ---~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g--i~v~~v~pg~v~t~~~~~  201 (255)
T PRK06841        154 ---ALERHVAYCASKAGVVGMTKVLALEWGPYG--ITVNAISPTVVLTELGKK  201 (255)
T ss_pred             ---CCCCCchHHHHHHHHHHHHHHHHHHHHhhC--eEEEEEEeCcCcCccccc
Confidence               667788999999999999999999999988  999999999999998653

>PRK08251 short chain dehydrogenase; Provisional

Probab=100.00  E-value=7.2e-32  Score=224.41  Aligned_cols=190  Identities=24%  Similarity=0.303  Sum_probs=168.3

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      |++|||||++|||++++++|+++|++|++++|+.++.++....+.+..++..+.++++|+++.+++.++++++...++++
T Consensus         3 k~vlItGas~giG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   82 (248)
T PRK08251          3 QKILITGASSGLGAGMAREFAAKGRDLALCARRTDRLEELKAELLARYPGIKVAVAALDVNDHDQVFEVFAEFRDELGGL   82 (248)
T ss_pred             CEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence            57999999999999999999999999999999998888887777766666789999999999999999999999999999


Q ss_pred             eEEEEcCCCCCC--CCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccccCC
Q 025509           81 NILINNAGIMGT--PFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKIN  158 (251)
Q Consensus        81 d~lv~~ag~~~~--~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~  158 (251)
                      |++|||||+...  ..+.+.+.+++.+++|+.+++.++++++|.+++.     +.++||++||..+..            
T Consensus        83 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-----~~~~iv~~sS~~~~~------------  145 (248)
T PRK08251         83 DRVIVNAGIGKGARLGTGKFWANKATAETNFVAALAQCEAAMEIFREQ-----GSGHLVLISSVSAVR------------  145 (248)
T ss_pred             CEEEECCCcCCCCCcCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-----CCCeEEEEecccccc------------
Confidence            999999997543  4455678889999999999999999999999875     467999999987665            


Q ss_pred             CCCCCCc-ccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCC
Q 025509          159 DPSGYNG-FRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRHN  212 (251)
Q Consensus       159 ~~~~~~~-~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~~  212 (251)
                         +.+. ...|+.||++++.+++.++.++.+.|  |++++|+||+++|++....
T Consensus       146 ---~~~~~~~~Y~~sK~a~~~~~~~l~~~~~~~~--i~v~~v~pg~v~t~~~~~~  195 (248)
T PRK08251        146 ---GLPGVKAAYAASKAGVASLGEGLRAELAKTP--IKVSTIEPGYIRSEMNAKA  195 (248)
T ss_pred             ---CCCCCcccHHHHHHHHHHHHHHHHHHhcccC--cEEEEEecCcCcchhhhcc
Confidence               3443 57899999999999999999999878  9999999999999987653

>PRK07454 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.7e-32  Score=225.35  Aligned_cols=187  Identities=28%  Similarity=0.312  Sum_probs=166.0

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      |++|||||++|||++++++|+++|++|++++|++++.++..+.+.+.  +.++.++.+|+++++++.++++++.++++++
T Consensus         7 k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   84 (241)
T PRK07454          7 PRALITGASSGIGKATALAFAKAGWDLALVARSQDALEALAAELRST--GVKAAAYSIDLSNPEAIAPGIAELLEQFGCP   84 (241)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhC--CCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            57999999999999999999999999999999988877777666543  4578899999999999999999999999999


Q ss_pred             eEEEEcCCCCC--CCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccccCC
Q 025509           81 NILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKIN  158 (251)
Q Consensus        81 d~lv~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~  158 (251)
                      |++|||||...  +..+.+.++++..+++|+.+++.+++.+++.+.++     +.++||++||..+..            
T Consensus        85 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-----~~~~iv~isS~~~~~------------  147 (241)
T PRK07454         85 DVLINNAGMAYTGPLLEMPLSDWQWVIQLNLTSVFQCCSAVLPGMRAR-----GGGLIINVSSIAARN------------  147 (241)
T ss_pred             CEEEECCCccCCCchhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhc-----CCcEEEEEccHHhCc------------
Confidence            99999999753  34566788999999999999999999999999875     468999999987654            


Q ss_pred             CCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccC
Q 025509          159 DPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  211 (251)
Q Consensus       159 ~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  211 (251)
                         +.+++..|+.+|++++.++++++.++.+.|  |++++|.||+++|++...
T Consensus       148 ---~~~~~~~Y~~sK~~~~~~~~~~a~e~~~~g--i~v~~i~pg~i~t~~~~~  195 (241)
T PRK07454        148 ---AFPQWGAYCVSKAALAAFTKCLAEEERSHG--IRVCTITLGAVNTPLWDT  195 (241)
T ss_pred             ---CCCCccHHHHHHHHHHHHHHHHHHHhhhhC--CEEEEEecCcccCCcccc
Confidence               566778999999999999999999999888  999999999999998653

>PRK06125 short chain dehydrogenase; Provisional

Probab=100.00  E-value=4.2e-32  Score=227.50  Aligned_cols=183  Identities=27%  Similarity=0.354  Sum_probs=161.2

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      |++|||||++|||+++|+.|+++|++|++++|+++++++..+++.+.. +.++.++.+|+++++++.+++++    ++++
T Consensus         8 k~vlItG~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~D~~~~~~~~~~~~~----~g~i   82 (259)
T PRK06125          8 KRVLITGASKGIGAAAAEAFAAEGCHLHLVARDADALEALAADLRAAH-GVDVAVHALDLSSPEAREQLAAE----AGDI   82 (259)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhc-CCceEEEEecCCCHHHHHHHHHH----hCCC
Confidence            589999999999999999999999999999999888888777776543 45688899999999999988764    4789


Q ss_pred             eEEEEcCCCCC--CCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccccCC
Q 025509           81 NILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKIN  158 (251)
Q Consensus        81 d~lv~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~  158 (251)
                      |++|||||...  ++.+.+.++|+..+++|+.+++.++++++|.|.++     ..|+||++||..+..            
T Consensus        83 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-----~~g~iv~iss~~~~~------------  145 (259)
T PRK06125         83 DILVNNAGAIPGGGLDDVDDAAWRAGWELKVFGYIDLTRLAYPRMKAR-----GSGVIVNVIGAAGEN------------  145 (259)
T ss_pred             CEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc-----CCcEEEEecCccccC------------
Confidence            99999999753  36678899999999999999999999999999874     357999999977654            


Q ss_pred             CCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCccc
Q 025509          159 DPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIR  210 (251)
Q Consensus       159 ~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~  210 (251)
                         +.+.+..|+++|+|+++|+++++.|+.+.|  |+||+|+||+++|++..
T Consensus       146 ---~~~~~~~y~ask~al~~~~~~la~e~~~~g--i~v~~i~PG~v~t~~~~  192 (259)
T PRK06125        146 ---PDADYICGSAGNAALMAFTRALGGKSLDDG--VRVVGVNPGPVATDRML  192 (259)
T ss_pred             ---CCCCchHhHHHHHHHHHHHHHHHHHhCccC--eEEEEEecCccccHHHH
Confidence               566778899999999999999999999999  99999999999999754

>PRK06124 gluconate 5-dehydrogenase; Provisional

Probab=100.00  E-value=1.1e-31  Score=224.50  Aligned_cols=187  Identities=27%  Similarity=0.383  Sum_probs=167.2

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      |+++||||++|||++++++|+++|++|++++|+++.++...+++.+.  +..+.++.+|+++++++.++++++...++++
T Consensus        12 k~ilItGas~~IG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i   89 (256)
T PRK06124         12 QVALVTGSARGLGFEIARALAGAGAHVLVNGRNAATLEAAVAALRAA--GGAAEALAFDIADEEAVAAAFARIDAEHGRL   89 (256)
T ss_pred             CEEEEECCCchHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhc--CCceEEEEccCCCHHHHHHHHHHHHHhcCCC
Confidence            68999999999999999999999999999999988877777776543  4568899999999999999999999999999


Q ss_pred             eEEEEcCCCCC--CCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccccCC
Q 025509           81 NILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKIN  158 (251)
Q Consensus        81 d~lv~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~  158 (251)
                      |++|||+|...  +..+.+.++|++.+++|+.+++.+++++++.|.++     ..+++|++||..+..            
T Consensus        90 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-----~~~~iv~~ss~~~~~------------  152 (256)
T PRK06124         90 DILVNNVGARDRRPLAELDDAAIRALLETDLVAPILLSRLAAQRMKRQ-----GYGRIIAITSIAGQV------------  152 (256)
T ss_pred             CEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-----CCcEEEEEeechhcc------------
Confidence            99999999653  35567889999999999999999999999999775     468999999987765            


Q ss_pred             CCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccC
Q 025509          159 DPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  211 (251)
Q Consensus       159 ~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  211 (251)
                         +.+++.+|+++|+++++++++++.|+.+.|  |+++.|+||+++|++.+.
T Consensus       153 ---~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~--i~v~~i~pg~v~t~~~~~  200 (256)
T PRK06124        153 ---ARAGDAVYPAAKQGLTGLMRALAAEFGPHG--ITSNAIAPGYFATETNAA  200 (256)
T ss_pred             ---CCCCccHhHHHHHHHHHHHHHHHHHHHHhC--cEEEEEEECCccCcchhh
Confidence               567788999999999999999999999888  999999999999998653

>PLN00015 protochlorophyllide reductase

Probab=100.00  E-value=7.1e-32  Score=231.83  Aligned_cols=201  Identities=38%  Similarity=0.570  Sum_probs=160.9

Q ss_pred             EEECCCChhHHHHHHHHHHcC-CEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCeeE
Q 025509            4 VITGATSGIGTETARVLALRG-VHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQLNI   82 (251)
Q Consensus         4 lItG~s~gIG~a~a~~l~~~G-~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~id~   82 (251)
                      |||||++|||+++|++|+++| ++|++++|+.+++++..+++...  +..+.++++|+++.++++++++++.+.++++|+
T Consensus         1 lITGas~GIG~aia~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dl~d~~~v~~~~~~~~~~~~~iD~   78 (308)
T PLN00015          1 IITGASSGLGLATAKALAETGKWHVVMACRDFLKAERAAKSAGMP--KDSYTVMHLDLASLDSVRQFVDNFRRSGRPLDV   78 (308)
T ss_pred             CEeCCCChHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhcCC--CCeEEEEEecCCCHHHHHHHHHHHHhcCCCCCE
Confidence            699999999999999999999 99999999988877776665322  346888999999999999999999888889999


Q ss_pred             EEEcCCCCC---CCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCC-----ccc
Q 025509           83 LINNAGIMG---TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEG-----IRF  154 (251)
Q Consensus        83 lv~~ag~~~---~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~-----~~~  154 (251)
                      ||||||+..   +..+.+.++|++.+++|+.|++.++++++|.|.++..   ..|+||++||..+.......     ..+
T Consensus        79 lInnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~l~~~~~---~~g~IV~vsS~~~~~~~~~~~~~~~~~~  155 (308)
T PLN00015         79 LVCNAAVYLPTAKEPTFTADGFELSVGTNHLGHFLLSRLLLDDLKKSDY---PSKRLIIVGSITGNTNTLAGNVPPKANL  155 (308)
T ss_pred             EEECCCcCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCC---CCCEEEEEeccccccccccccCCCccch
Confidence            999999753   2446788999999999999999999999999987410   15899999998764321000     000


Q ss_pred             ccC---------------CCCCCCCcccccchhHHHHHHHHHHHHHHhcc-CCCcEEEEEeeCCcc-cCCcccC
Q 025509          155 DKI---------------NDPSGYNGFRAYSQSKLANILHANELARRLKE-DGVDITANSVHPGAI-ATNIIRH  211 (251)
Q Consensus       155 ~~~---------------~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~-~g~~i~v~~v~Pg~v-~t~~~~~  211 (251)
                      .++               ....+.+++..|++||+|+..+++.+++++.+ .|  |+|++|+||+| .|+|.+.
T Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~aY~~SK~a~~~~~~~la~~~~~~~g--i~v~~v~PG~v~~t~~~~~  227 (308)
T PLN00015        156 GDLRGLAGGLNGLNSSAMIDGGEFDGAKAYKDSKVCNMLTMQEFHRRYHEETG--ITFASLYPGCIATTGLFRE  227 (308)
T ss_pred             hhhhhhhcccCCccchhhccccCCcHHHHHhHhHHHHHHHHHHHHHhhcccCC--eEEEEecCCcccCcccccc
Confidence            000               00123346678999999999999999999975 57  99999999999 7898764

>PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=6.1e-32  Score=232.00  Aligned_cols=189  Identities=30%  Similarity=0.334  Sum_probs=161.8

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecC-chhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCC
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRD-IAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQ   79 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~-~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~   79 (251)
                      |++|||||++|||+++|++|+++|++|++.+++ ....++..+++.+.  +.++.++.+|+++.++++++++++.+ +|+
T Consensus        13 k~~lVTGas~gIG~~ia~~L~~~Ga~Vv~~~~~~~~~~~~~~~~i~~~--g~~~~~~~~Dv~d~~~~~~~~~~~~~-~g~   89 (306)
T PRK07792         13 KVAVVTGAAAGLGRAEALGLARLGATVVVNDVASALDASDVLDEIRAA--GAKAVAVAGDISQRATADELVATAVG-LGG   89 (306)
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEecCCchhHHHHHHHHHHhc--CCeEEEEeCCCCCHHHHHHHHHHHHH-hCC
Confidence            689999999999999999999999999999875 34566666666543  56788999999999999999999988 899


Q ss_pred             eeEEEEcCCCCCC--CCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccC--CCCceEEEEcCccccccccCCcccc
Q 025509           80 LNILINNAGIMGT--PFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKS--GGEGRIINVSSEGHRLAYHEGIRFD  155 (251)
Q Consensus        80 id~lv~~ag~~~~--~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~--~~~g~iv~vsS~~~~~~~~~~~~~~  155 (251)
                      +|+||||||+...  +.+.+.++|+..+++|+.+++.+++++.++|+++.+..  ...|+||++||.++..         
T Consensus        90 iD~li~nAG~~~~~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~---------  160 (306)
T PRK07792         90 LDIVVNNAGITRDRMLFNMSDEEWDAVIAVHLRGHFLLTRNAAAYWRAKAKAAGGPVYGRIVNTSSEAGLV---------  160 (306)
T ss_pred             CCEEEECCCCCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhcccCCCCCcEEEEECCccccc---------
Confidence            9999999997643  55678899999999999999999999999997653211  1247999999987765         


Q ss_pred             cCCCCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCccc
Q 025509          156 KINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIR  210 (251)
Q Consensus       156 ~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~  210 (251)
                            +.++...|+++|+|+++|+++++.|+.+.|  |+||+|+|| ..|+|..
T Consensus       161 ------~~~~~~~Y~asKaal~~l~~~la~e~~~~g--I~vn~i~Pg-~~t~~~~  206 (306)
T PRK07792        161 ------GPVGQANYGAAKAGITALTLSAARALGRYG--VRANAICPR-ARTAMTA  206 (306)
T ss_pred             ------CCCCCchHHHHHHHHHHHHHHHHHHhhhcC--eEEEEECCC-CCCchhh
Confidence                  566778999999999999999999999999  999999999 4888764

>PRK06483 dihydromonapterin reductase; Provisional

Probab=100.00  E-value=3.5e-32  Score=224.88  Aligned_cols=180  Identities=24%  Similarity=0.250  Sum_probs=153.6

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      |++|||||++|||+++|++|+++|++|++++|++....   +.+.+    ..+.++.+|+++.++++++++++.+.++++
T Consensus         3 k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~---~~~~~----~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   75 (236)
T PRK06483          3 APILITGAGQRIGLALAWHLLAQGQPVIVSYRTHYPAI---DGLRQ----AGAQCIQADFSTNAGIMAFIDELKQHTDGL   75 (236)
T ss_pred             ceEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchhHH---HHHHH----cCCEEEEcCCCCHHHHHHHHHHHHhhCCCc
Confidence            68999999999999999999999999999999875432   22222    126788999999999999999999889999


Q ss_pred             eEEEEcCCCCC--CCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccccCC
Q 025509           81 NILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKIN  158 (251)
Q Consensus        81 d~lv~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~  158 (251)
                      |++|||||...  .+.+.++++|++++++|+.+++.+++.++|.|.++..   ..++||++||..+..            
T Consensus        76 d~lv~~ag~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~---~~g~iv~~ss~~~~~------------  140 (236)
T PRK06483         76 RAIIHNASDWLAEKPGAPLADVLARMMQIHVNAPYLLNLALEDLLRGHGH---AASDIIHITDYVVEK------------  140 (236)
T ss_pred             cEEEECCccccCCCcCccCHHHHHHHHHHcchHHHHHHHHHHHHHHhCCC---CCceEEEEcchhhcc------------
Confidence            99999999753  2456678999999999999999999999999987410   147999999976654            


Q ss_pred             CCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCc
Q 025509          159 DPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNI  208 (251)
Q Consensus       159 ~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~  208 (251)
                         +.+.+..|+++|+++++|+++++.|+++ +  |+||+|+||++.|+.
T Consensus       141 ---~~~~~~~Y~asKaal~~l~~~~a~e~~~-~--irvn~v~Pg~~~~~~  184 (236)
T PRK06483        141 ---GSDKHIAYAASKAALDNMTLSFAAKLAP-E--VKVNSIAPALILFNE  184 (236)
T ss_pred             ---CCCCCccHHHHHHHHHHHHHHHHHHHCC-C--cEEEEEccCceecCC
Confidence               5667789999999999999999999986 5  999999999998764

>PRK06484 short chain dehydrogenase; Validated

Probab=100.00  E-value=2.5e-32  Score=250.22  Aligned_cols=185  Identities=25%  Similarity=0.375  Sum_probs=165.0

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      |++|||||++|||+++|++|+++|++|++++|+.+++++..+++     +..+.++++|++++++++++++++.++++++
T Consensus         6 k~~lITGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i   80 (520)
T PRK06484          6 RVVLVTGAAGGIGRAACQRFARAGDQVVVADRNVERARERADSL-----GPDHHALAMDVSDEAQIREGFEQLHREFGRI   80 (520)
T ss_pred             eEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-----CCceeEEEeccCCHHHHHHHHHHHHHHhCCC
Confidence            68999999999999999999999999999999988777665554     4567889999999999999999999999999


Q ss_pred             eEEEEcCCCC----CCCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCccccc
Q 025509           81 NILINNAGIM----GTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDK  156 (251)
Q Consensus        81 d~lv~~ag~~----~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~  156 (251)
                      |+||||||+.    .++.+.+.++|++++++|+.+++.++++++|+|+++.    .+++||++||..+..          
T Consensus        81 D~li~nag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~----~g~~iv~isS~~~~~----------  146 (520)
T PRK06484         81 DVLVNNAGVTDPTMTATLDTTLEEFARLQAINLTGAYLVAREALRLMIEQG----HGAAIVNVASGAGLV----------  146 (520)
T ss_pred             CEEEECCCcCCCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC----CCCeEEEECCcccCC----------
Confidence            9999999973    2355778899999999999999999999999997741    235999999988776          


Q ss_pred             CCCCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccC
Q 025509          157 INDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  211 (251)
Q Consensus       157 ~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  211 (251)
                           +.+.+..|+++|+|+++|+++++.|+.+.|  |+|++|+||+++|++...
T Consensus       147 -----~~~~~~~Y~asKaal~~l~~~la~e~~~~~--i~v~~i~Pg~v~t~~~~~  194 (520)
T PRK06484        147 -----ALPKRTAYSASKAAVISLTRSLACEWAAKG--IRVNAVLPGYVRTQMVAE  194 (520)
T ss_pred             -----CCCCCchHHHHHHHHHHHHHHHHHHhhhhC--eEEEEEccCCcCchhhhh
Confidence                 667788999999999999999999999999  999999999999998754

>PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional

Probab=100.00  E-value=7.1e-32  Score=225.94  Aligned_cols=189  Identities=22%  Similarity=0.277  Sum_probs=164.4

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      |++|||||+++||.+++++|+++|++|++++|+....++..+++.+......+.++.+|+++.+++..+++++.+.++++
T Consensus         3 k~ilItG~~~~IG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~i   82 (259)
T PRK12384          3 QVAVVIGGGQTLGAFLCHGLAEEGYRVAVADINSEKAANVAQEINAEYGEGMAYGFGADATSEQSVLALSRGVDEIFGRV   82 (259)
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhcCCceeEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            58999999999999999999999999999999988887777776655433568999999999999999999999999999


Q ss_pred             eEEEEcCCCCC--CCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccccCC
Q 025509           81 NILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKIN  158 (251)
Q Consensus        81 d~lv~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~  158 (251)
                      |++|||||...  +..+.+.++|++.+++|+.+++.+++++.+.|.++.    ..++||++||..+..            
T Consensus        83 d~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~----~~~~iv~~ss~~~~~------------  146 (259)
T PRK12384         83 DLLVYNAGIAKAAFITDFQLGDFDRSLQVNLVGYFLCAREFSRLMIRDG----IQGRIIQINSKSGKV------------  146 (259)
T ss_pred             CEEEECCCcCCCCCcccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhCC----CCcEEEEecCccccc------------
Confidence            99999999653  355678899999999999999999999999998741    157999999977654            


Q ss_pred             CCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcc-cCCccc
Q 025509          159 DPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAI-ATNIIR  210 (251)
Q Consensus       159 ~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v-~t~~~~  210 (251)
                         +.+...+|+++|+|+++++++++.|+.+.|  |+|++|+||.+ .|++..
T Consensus       147 ---~~~~~~~Y~~sKaa~~~l~~~la~e~~~~g--i~v~~v~pg~~~~~~~~~  194 (259)
T PRK12384        147 ---GSKHNSGYSAAKFGGVGLTQSLALDLAEYG--ITVHSLMLGNLLKSPMFQ  194 (259)
T ss_pred             ---CCCCCchhHHHHHHHHHHHHHHHHHHHHcC--cEEEEEecCCcccchhhh
Confidence               455677999999999999999999999999  99999999975 666544

>PRK06180 short chain dehydrogenase; Provisional

Probab=100.00  E-value=5.2e-32  Score=229.22  Aligned_cols=183  Identities=26%  Similarity=0.341  Sum_probs=161.4

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      |++|||||+||||++++++|+++|++|++++|++++++...+.    . +.++.++.+|+++.+++.++++.+.+.++++
T Consensus         5 ~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~l~~~----~-~~~~~~~~~D~~d~~~~~~~~~~~~~~~~~~   79 (277)
T PRK06180          5 KTWLITGVSSGFGRALAQAALAAGHRVVGTVRSEAARADFEAL----H-PDRALARLLDVTDFDAIDAVVADAEATFGPI   79 (277)
T ss_pred             CEEEEecCCChHHHHHHHHHHhCcCEEEEEeCCHHHHHHHHhh----c-CCCeeEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence            5799999999999999999999999999999988766554332    1 3468889999999999999999998889999


Q ss_pred             eEEEEcCCCCC--CCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccccCC
Q 025509           81 NILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKIN  158 (251)
Q Consensus        81 d~lv~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~  158 (251)
                      |+||||||...  +..+.+.++|++.+++|+.+++.++++++|+++++     +.++||++||.++..            
T Consensus        80 d~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~-----~~~~iv~iSS~~~~~------------  142 (277)
T PRK06180         80 DVLVNNAGYGHEGAIEESPLAEMRRQFEVNVFGAVAMTKAVLPGMRAR-----RRGHIVNITSMGGLI------------  142 (277)
T ss_pred             CEEEECCCccCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcc-----CCCEEEEEecccccC------------
Confidence            99999999753  35567888999999999999999999999999875     457999999987765            


Q ss_pred             CCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCccc
Q 025509          159 DPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIR  210 (251)
Q Consensus       159 ~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~  210 (251)
                         +.+++..|+++|+++++++++++.|+.+.|  +++++|+||++.|++..
T Consensus       143 ---~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g--i~v~~i~Pg~v~t~~~~  189 (277)
T PRK06180        143 ---TMPGIGYYCGSKFALEGISESLAKEVAPFG--IHVTAVEPGSFRTDWAG  189 (277)
T ss_pred             ---CCCCcchhHHHHHHHHHHHHHHHHHhhhhC--cEEEEEecCCcccCccc
Confidence               567788999999999999999999999888  99999999999998744

>PRK06940 short chain dehydrogenase; Provisional

Probab=100.00  E-value=5.8e-32  Score=228.81  Aligned_cols=191  Identities=23%  Similarity=0.269  Sum_probs=153.3

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      |+++|||+ +|||+++|++|+ +|++|++++|+.+++++..+++.+.  +.++.++++|+++.+++.++++++ ++++++
T Consensus         3 k~~lItGa-~gIG~~la~~l~-~G~~Vv~~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dv~d~~~i~~~~~~~-~~~g~i   77 (275)
T PRK06940          3 EVVVVIGA-GGIGQAIARRVG-AGKKVLLADYNEENLEAAAKTLREA--GFDVSTQEVDVSSRESVKALAATA-QTLGPV   77 (275)
T ss_pred             CEEEEECC-ChHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHHHHhc--CCeEEEEEeecCCHHHHHHHHHHH-HhcCCC
Confidence            68999998 699999999996 8999999999988777777666543  457889999999999999999988 467899


Q ss_pred             eEEEEcCCCCCCCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCcccccccc----C-----C
Q 025509           81 NILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYH----E-----G  151 (251)
Q Consensus        81 d~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~----~-----~  151 (251)
                      |+||||||+..     ..++|++.+++|+.+++.++++++|+|.+       .+++|++||.++.....    .     .
T Consensus        78 d~li~nAG~~~-----~~~~~~~~~~vN~~g~~~l~~~~~~~m~~-------~g~iv~isS~~~~~~~~~~~~~~~~~~~  145 (275)
T PRK06940         78 TGLVHTAGVSP-----SQASPEAILKVDLYGTALVLEEFGKVIAP-------GGAGVVIASQSGHRLPALTAEQERALAT  145 (275)
T ss_pred             CEEEECCCcCC-----chhhHHHHHHHhhHHHHHHHHHHHHHHhh-------CCCEEEEEecccccCcccchhhhccccc
Confidence            99999999742     24679999999999999999999999965       36789999987654210    0     0


Q ss_pred             cccccCC------CCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCccc
Q 025509          152 IRFDKIN------DPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIR  210 (251)
Q Consensus       152 ~~~~~~~------~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~  210 (251)
                      .++.++.      .....+.+..|++||+|+.+++++++.|+.++|  |+||+|+||+++|++..
T Consensus       146 ~~~~~~~~~~~~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~g--Irvn~i~PG~v~T~~~~  208 (275)
T PRK06940        146 TPTEELLSLPFLQPDAIEDSLHAYQIAKRANALRVMAEAVKWGERG--ARINSISPGIISTPLAQ  208 (275)
T ss_pred             cccccccccccccccccCCccchhHHHHHHHHHHHHHHHHHHccCC--eEEEEeccCcCcCccch
Confidence            0000000      000013467899999999999999999999999  99999999999999865

>PRK07890 short chain dehydrogenase; Provisional

Probab=100.00  E-value=7.5e-32  Score=225.46  Aligned_cols=185  Identities=23%  Similarity=0.256  Sum_probs=164.6

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      |++|||||++|||+++|++|+++|++|++++|++..+++..+++...  +.++.++.+|+++.++++++++++.++++++
T Consensus         6 k~vlItGa~~~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~   83 (258)
T PRK07890          6 KVVVVSGVGPGLGRTLAVRAARAGADVVLAARTAERLDEVAAEIDDL--GRRALAVPTDITDEDQCANLVALALERFGRV   83 (258)
T ss_pred             CEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHh--CCceEEEecCCCCHHHHHHHHHHHHHHcCCc
Confidence            68999999999999999999999999999999988777777666543  4568899999999999999999999999999


Q ss_pred             eEEEEcCCCCC---CCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccccC
Q 025509           81 NILINNAGIMG---TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKI  157 (251)
Q Consensus        81 d~lv~~ag~~~---~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~  157 (251)
                      |++|||||...   ++.+.+.++|++.+++|+.+++.+++++.+.+.+.      .++||++||..+..           
T Consensus        84 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~------~~~ii~~sS~~~~~-----------  146 (258)
T PRK07890         84 DALVNNAFRVPSMKPLADADFAHWRAVIELNVLGTLRLTQAFTPALAES------GGSIVMINSMVLRH-----------  146 (258)
T ss_pred             cEEEECCccCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhC------CCEEEEEechhhcc-----------
Confidence            99999999643   34567789999999999999999999999998763      47999999987654           


Q ss_pred             CCCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCccc
Q 025509          158 NDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIR  210 (251)
Q Consensus       158 ~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~  210 (251)
                          +.+++..|+++|++++.++++++.|+.+.|  |++++|+||++.|++..
T Consensus       147 ----~~~~~~~Y~~sK~a~~~l~~~~a~~~~~~~--i~v~~v~pg~v~~~~~~  193 (258)
T PRK07890        147 ----SQPKYGAYKMAKGALLAASQSLATELGPQG--IRVNSVAPGYIWGDPLK  193 (258)
T ss_pred             ----CCCCcchhHHHHHHHHHHHHHHHHHHhhcC--cEEEEEeCCccCcHHHH
Confidence                667788999999999999999999999988  99999999999999754

>PRK08226 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.4e-31  Score=224.67  Aligned_cols=187  Identities=25%  Similarity=0.348  Sum_probs=160.8

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      |++|||||++|||++++++|+++|++|++++|+.. ..+..+++.+.  +.++.++++|++++++++++++++.+.++++
T Consensus         7 ~~~lItG~s~giG~~la~~l~~~G~~Vv~~~r~~~-~~~~~~~~~~~--~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~i   83 (263)
T PRK08226          7 KTALITGALQGIGEGIARVFARHGANLILLDISPE-IEKLADELCGR--GHRCTAVVADVRDPASVAAAIKRAKEKEGRI   83 (263)
T ss_pred             CEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHH-HHHHHHHHHHh--CCceEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence            57999999999999999999999999999999864 44444444332  4568889999999999999999999999999


Q ss_pred             eEEEEcCCCCC--CCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccccCC
Q 025509           81 NILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKIN  158 (251)
Q Consensus        81 d~lv~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~  158 (251)
                      |++|||||...  ++.+.+.+++++.+++|+.+++.++++++|++.+.     ..++||++||..+...           
T Consensus        84 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-----~~~~iv~isS~~~~~~-----------  147 (263)
T PRK08226         84 DILVNNAGVCRLGSFLDMSDEDRDFHIDINIKGVWNVTKAVLPEMIAR-----KDGRIVMMSSVTGDMV-----------  147 (263)
T ss_pred             CEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhc-----CCcEEEEECcHHhccc-----------
Confidence            99999999753  35567888999999999999999999999998764     4579999999765321           


Q ss_pred             CCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccC
Q 025509          159 DPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  211 (251)
Q Consensus       159 ~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  211 (251)
                         +.+++..|+.+|+++++++++++.++.++|  |+|++|+||+++|++.+.
T Consensus       148 ---~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~--i~v~~i~pg~v~t~~~~~  195 (263)
T PRK08226        148 ---ADPGETAYALTKAAIVGLTKSLAVEYAQSG--IRVNAICPGYVRTPMAES  195 (263)
T ss_pred             ---CCCCcchHHHHHHHHHHHHHHHHHHhcccC--cEEEEEecCcccCHHHHh
Confidence               445677999999999999999999999888  999999999999998654

>PRK08263 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.6e-31  Score=224.67  Aligned_cols=183  Identities=27%  Similarity=0.307  Sum_probs=162.6

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      |++|||||++|||++++++|+++|++|++++|+.+.+++..+.+     +..+.++++|+++.+++.++++.+.+.++++
T Consensus         4 k~vlItGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   78 (275)
T PRK08263          4 KVWFITGASRGFGRAWTEAALERGDRVVATARDTATLADLAEKY-----GDRLLPLALDVTDRAAVFAAVETAVEHFGRL   78 (275)
T ss_pred             CEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhc-----cCCeeEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            57999999999999999999999999999999987766554432     3468889999999999999999998888999


Q ss_pred             eEEEEcCCCCC--CCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccccCC
Q 025509           81 NILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKIN  158 (251)
Q Consensus        81 d~lv~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~  158 (251)
                      |++|||||...  +..+.+.++|++.+++|+.+++.+++.++|.++++     +.++||++||..+..            
T Consensus        79 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-----~~~~iv~vsS~~~~~------------  141 (275)
T PRK08263         79 DIVVNNAGYGLFGMIEEVTESEARAQIDTNFFGALWVTQAVLPYLREQ-----RSGHIIQISSIGGIS------------  141 (275)
T ss_pred             CEEEECCCCccccccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-----CCCEEEEEcChhhcC------------
Confidence            99999999764  35567889999999999999999999999999875     457999999987765            


Q ss_pred             CCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCccc
Q 025509          159 DPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIR  210 (251)
Q Consensus       159 ~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~  210 (251)
                         +.+....|+.+|+++++++++++.++.+.|  |+|+.|+||++.|++..
T Consensus       142 ---~~~~~~~Y~~sKaa~~~~~~~la~e~~~~g--i~v~~v~Pg~~~t~~~~  188 (275)
T PRK08263        142 ---AFPMSGIYHASKWALEGMSEALAQEVAEFG--IKVTLVEPGGYSTDWAG  188 (275)
T ss_pred             ---CCCCccHHHHHHHHHHHHHHHHHHHhhhhC--cEEEEEecCCccCCccc
Confidence               566778999999999999999999999888  99999999999999874

>PRK08267 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.4e-31  Score=222.95  Aligned_cols=185  Identities=25%  Similarity=0.261  Sum_probs=163.6

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhc-CCC
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQ-HHQ   79 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~-~g~   79 (251)
                      |++|||||++|||++++++|+++|++|++++|+.+.+++..+.+.    +..+.++++|+++.+++.++++.+.+. +++
T Consensus         2 k~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~----~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~~   77 (260)
T PRK08267          2 KSIFITGAASGIGRATALLFAAEGWRVGAYDINEAGLAALAAELG----AGNAWTGALDVTDRAAWDAALADFAAATGGR   77 (260)
T ss_pred             cEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhc----CCceEEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence            679999999999999999999999999999999877776655442    457899999999999999999988665 789


Q ss_pred             eeEEEEcCCCCCC--CCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccccC
Q 025509           80 LNILINNAGIMGT--PFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKI  157 (251)
Q Consensus        80 id~lv~~ag~~~~--~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~  157 (251)
                      +|+||||||....  ..+.+.++++.++++|+.+++.+++++.++|+.+     +.++||++||..+..           
T Consensus        78 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-----~~~~iv~isS~~~~~-----------  141 (260)
T PRK08267         78 LDVLFNNAGILRGGPFEDIPLEAHDRVIDINVKGVLNGAHAALPYLKAT-----PGARVINTSSASAIY-----------  141 (260)
T ss_pred             CCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhC-----CCCEEEEeCchhhCc-----------
Confidence            9999999997543  5567889999999999999999999999999875     468999999987766           


Q ss_pred             CCCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccC
Q 025509          158 NDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  211 (251)
Q Consensus       158 ~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  211 (251)
                          +.+....|+.||+++++|+++++.++.+.|  |++++|+||+++|++.+.
T Consensus       142 ----~~~~~~~Y~~sKaa~~~~~~~l~~~~~~~~--i~v~~i~pg~~~t~~~~~  189 (260)
T PRK08267        142 ----GQPGLAVYSATKFAVRGLTEALDLEWRRHG--IRVADVMPLFVDTAMLDG  189 (260)
T ss_pred             ----CCCCchhhHHHHHHHHHHHHHHHHHhcccC--cEEEEEecCCcCCccccc
Confidence                566778999999999999999999999988  999999999999998764

>PRK06523 short chain dehydrogenase; Provisional

Probab=100.00  E-value=5.5e-32  Score=226.75  Aligned_cols=177  Identities=26%  Similarity=0.313  Sum_probs=156.1

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      |++|||||++|||++++++|+++|++|++++|++...          . +..+.++++|+++.++++++++++.+.++++
T Consensus        10 k~vlItGas~gIG~~ia~~l~~~G~~v~~~~r~~~~~----------~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   78 (260)
T PRK06523         10 KRALVTGGTKGIGAATVARLLEAGARVVTTARSRPDD----------L-PEGVEFVAADLTTAEGCAAVARAVLERLGGV   78 (260)
T ss_pred             CEEEEECCCCchhHHHHHHHHHCCCEEEEEeCChhhh----------c-CCceeEEecCCCCHHHHHHHHHHHHHHcCCC
Confidence            5799999999999999999999999999999986431          1 3468889999999999999999999999999


Q ss_pred             eEEEEcCCCCC----CCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCccccc
Q 025509           81 NILINNAGIMG----TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDK  156 (251)
Q Consensus        81 d~lv~~ag~~~----~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~  156 (251)
                      |+||||||...    +..+.+.++|++.+++|+.+++.++++++|+|+++     ..++||++||..+..          
T Consensus        79 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-----~~g~ii~isS~~~~~----------  143 (260)
T PRK06523         79 DILVHVLGGSSAPAGGFAALTDEEWQDELNLNLLAAVRLDRALLPGMIAR-----GSGVIIHVTSIQRRL----------  143 (260)
T ss_pred             CEEEECCcccccCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhc-----CCcEEEEEecccccC----------
Confidence            99999999642    24567889999999999999999999999999875     358999999987654          


Q ss_pred             CCCCCCCC-cccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCccc
Q 025509          157 INDPSGYN-GFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIR  210 (251)
Q Consensus       157 ~~~~~~~~-~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~  210 (251)
                           +.+ .+..|+++|+++++|+++++.++.++|  |++++|+||+++|++..
T Consensus       144 -----~~~~~~~~Y~~sK~a~~~l~~~~a~~~~~~g--i~v~~i~Pg~v~t~~~~  191 (260)
T PRK06523        144 -----PLPESTTAYAAAKAALSTYSKSLSKEVAPKG--VRVNTVSPGWIETEAAV  191 (260)
T ss_pred             -----CCCCCcchhHHHHHHHHHHHHHHHHHHhhcC--cEEEEEecCcccCccHH
Confidence                 333 677999999999999999999999999  99999999999999864

>PRK06179 short chain dehydrogenase; Provisional

Probab=100.00  E-value=5.5e-32  Score=228.00  Aligned_cols=179  Identities=31%  Similarity=0.337  Sum_probs=159.8

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      ++++||||+||||++++++|+++|++|++++|+......          ...+.++++|++|+++++++++.+.+.++++
T Consensus         5 ~~vlVtGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~----------~~~~~~~~~D~~d~~~~~~~~~~~~~~~g~~   74 (270)
T PRK06179          5 KVALVTGASSGIGRATAEKLARAGYRVFGTSRNPARAAP----------IPGVELLELDVTDDASVQAAVDEVIARAGRI   74 (270)
T ss_pred             CEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCChhhccc----------cCCCeeEEeecCCHHHHHHHHHHHHHhCCCC
Confidence            479999999999999999999999999999998654321          2357889999999999999999999999999


Q ss_pred             eEEEEcCCCCC--CCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccccCC
Q 025509           81 NILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKIN  158 (251)
Q Consensus        81 d~lv~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~  158 (251)
                      |+||||||...  +..+.+.+++++++++|+.+++.++++++|+|+++     +.++||++||..+..            
T Consensus        75 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~-----~~~~iv~isS~~~~~------------  137 (270)
T PRK06179         75 DVLVNNAGVGLAGAAEESSIAQAQALFDTNVFGILRMTRAVLPHMRAQ-----GSGRIINISSVLGFL------------  137 (270)
T ss_pred             CEEEECCCCCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-----CCceEEEECCccccC------------
Confidence            99999999753  35567889999999999999999999999999875     468999999987765            


Q ss_pred             CCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccC
Q 025509          159 DPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  211 (251)
Q Consensus       159 ~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  211 (251)
                         +.+....|+++|++++.|+++++.|+.+.|  |++++|+||++.|++...
T Consensus       138 ---~~~~~~~Y~~sK~a~~~~~~~l~~el~~~g--i~v~~v~pg~~~t~~~~~  185 (270)
T PRK06179        138 ---PAPYMALYAASKHAVEGYSESLDHEVRQFG--IRVSLVEPAYTKTNFDAN  185 (270)
T ss_pred             ---CCCCccHHHHHHHHHHHHHHHHHHHHhhhC--cEEEEEeCCCcccccccc
Confidence               567778999999999999999999999988  999999999999998764

>TIGR02415 23BDH acetoin reductases

Probab=100.00  E-value=1.4e-31  Score=223.42  Aligned_cols=188  Identities=24%  Similarity=0.321  Sum_probs=166.7

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      |+++||||++|||.+++++|+++|++|++++|+...+++..+++.+.  +..+.++.+|+++++++.++++++.+.++++
T Consensus         1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~i   78 (254)
T TIGR02415         1 KVALVTGGAQGIGKGIAERLAKDGFAVAVADLNEETAKETAKEINQA--GGKAVAYKLDVSDKDQVFSAIDQAAEKFGGF   78 (254)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCeEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence            68999999999999999999999999999999987777776666543  4568899999999999999999999999999


Q ss_pred             eEEEEcCCCCC--CCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccccCC
Q 025509           81 NILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKIN  158 (251)
Q Consensus        81 d~lv~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~  158 (251)
                      |+||||||...  +..+.+.++|++.+++|+.+++.+++++++.|.++.    ..++||++||..+..            
T Consensus        79 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~----~~~~iv~~sS~~~~~------------  142 (254)
T TIGR02415        79 DVMVNNAGVAPITPILEITEEELKKVYNVNVKGVLFGIQAAARQFKKQG----HGGKIINAASIAGHE------------  142 (254)
T ss_pred             CEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCC----CCeEEEEecchhhcC------------
Confidence            99999999753  355778899999999999999999999999998751    247999999987765            


Q ss_pred             CCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccC
Q 025509          159 DPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  211 (251)
Q Consensus       159 ~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  211 (251)
                         +.+.+.+|+.+|+++++|+++++.++.+.|  |+|+.|+||+++|++.+.
T Consensus       143 ---~~~~~~~Y~~sK~a~~~~~~~l~~~~~~~~--i~v~~v~Pg~i~t~~~~~  190 (254)
T TIGR02415       143 ---GNPILSAYSSTKFAVRGLTQTAAQELAPKG--ITVNAYCPGIVKTPMWEE  190 (254)
T ss_pred             ---CCCCCcchHHHHHHHHHHHHHHHHHhcccC--eEEEEEecCcccChhhhh
Confidence               667788999999999999999999999888  999999999999998653

One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733).

>PRK06300 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=1.4e-32  Score=234.33  Aligned_cols=186  Identities=17%  Similarity=0.183  Sum_probs=144.3

Q ss_pred             CEEEEECCC--ChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHh--------hCCCC-----ceEEEEecCCCH--
Q 025509            1 MDIVITGAT--SGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVK--------EIPSA-----KVDAMELDLSSL--   63 (251)
Q Consensus         1 k~vlItG~s--~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~--------~~~~~-----~v~~~~~D~~~~--   63 (251)
                      |++||||++  +|||+++|+.|+++|++|++.++.+ .+....+....        ...+.     .+..+.+|+++.  
T Consensus         9 k~alITGa~~~~GIG~a~A~~la~~Ga~Vvv~~~~~-~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~~~~~~   87 (299)
T PRK06300          9 KIAFIAGIGDDQGYGWGIAKALAEAGATILVGTWVP-IYKIFSQSLELGKFDASRKLSNGSLLTFAKIYPMDASFDTPED   87 (299)
T ss_pred             CEEEEeCCCCCCCHHHHHHHHHHHCCCEEEEEeccc-hhhhhhhhcccccccccccccccchhhhhhHHHhhhhcCCCEE
Confidence            689999996  9999999999999999999987642 11111110000        00000     011122333332  


Q ss_pred             ----------------HHHHHHHHHHHhcCCCeeEEEEcCCCC----CCCCcCCchhhHHHHHHHHHHHHHHHHHHHHHH
Q 025509           64 ----------------ASVRNFASEYNIQHHQLNILINNAGIM----GTPFMLSKDNIELQFATNHLGHFLLTNLLLDTM  123 (251)
Q Consensus        64 ----------------~~i~~~~~~~~~~~g~id~lv~~ag~~----~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~  123 (251)
                                      ++++++++++.+++|++|+||||||..    .++.++++++|++++++|+.|++.++++++|+|
T Consensus        88 v~~~i~~~~~~~~~~~~si~~~~~~v~~~~G~lDvLVnNAG~~~~~~~~~~~~~~e~~~~~~~vNl~g~~~l~~a~~p~m  167 (299)
T PRK06300         88 VPEEIRENKRYKDLSGYTISEVAEQVKKDFGHIDILVHSLANSPEISKPLLETSRKGYLAALSTSSYSFVSLLSHFGPIM  167 (299)
T ss_pred             eecccCccccccCCCHHHHHHHHHHHHHHcCCCcEEEECCCcCcccCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHh
Confidence                            468999999999999999999999863    346688999999999999999999999999999


Q ss_pred             HHhhccCCCCceEEEEcCccccccccCCcccccCCCCCCCCccc-ccchhHHHHHHHHHHHHHHhcc-CCCcEEEEEeeC
Q 025509          124 KKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFR-AYSQSKLANILHANELARRLKE-DGVDITANSVHP  201 (251)
Q Consensus       124 ~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~-~Y~~sK~a~~~~~~~la~e~~~-~g~~i~v~~v~P  201 (251)
                      ++       .|+||+++|..+..               +.+.+. .|++||+|+.+|+++|+.|+++ +|  |+||+|+|
T Consensus       168 ~~-------~G~ii~iss~~~~~---------------~~p~~~~~Y~asKaAl~~lt~~la~el~~~~g--IrVn~V~P  223 (299)
T PRK06300        168 NP-------GGSTISLTYLASMR---------------AVPGYGGGMSSAKAALESDTKVLAWEAGRRWG--IRVNTISA  223 (299)
T ss_pred             hc-------CCeEEEEeehhhcC---------------cCCCccHHHHHHHHHHHHHHHHHHHHhCCCCC--eEEEEEEe
Confidence            65       37899999977765               455554 7999999999999999999987 48  99999999


Q ss_pred             CcccCCcccC
Q 025509          202 GAIATNIIRH  211 (251)
Q Consensus       202 g~v~t~~~~~  211 (251)
                      |+++|++...
T Consensus       224 G~v~T~~~~~  233 (299)
T PRK06300        224 GPLASRAGKA  233 (299)
T ss_pred             CCccChhhhc
Confidence            9999998653

>PRK10538 malonic semialdehyde reductase; Provisional

Probab=100.00  E-value=4.2e-31  Score=220.11  Aligned_cols=182  Identities=23%  Similarity=0.363  Sum_probs=160.4

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      |+++||||++|||.++|++|+++|++|++++|+++++++..+.+     +.++.++.+|+++.++++.+++++.+.++++
T Consensus         1 ~~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~i   75 (248)
T PRK10538          1 MIVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDEL-----GDNLYIAQLDVRNRAAIEEMLASLPAEWRNI   75 (248)
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh-----ccceEEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence            68999999999999999999999999999999987766655443     3468899999999999999999998888999


Q ss_pred             eEEEEcCCCC---CCCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccccC
Q 025509           81 NILINNAGIM---GTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKI  157 (251)
Q Consensus        81 d~lv~~ag~~---~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~  157 (251)
                      |++|||||..   .+..+.+.+++++++++|+.+++.++++++|+++++     ..++||++||..+..           
T Consensus        76 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-----~~~~iv~isS~~~~~-----------  139 (248)
T PRK10538         76 DVLVNNAGLALGLEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVER-----NHGHIINIGSTAGSW-----------  139 (248)
T ss_pred             CEEEECCCccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-----CCcEEEEECCcccCC-----------
Confidence            9999999964   234567889999999999999999999999999875     457999999977654           


Q ss_pred             CCCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcc
Q 025509          158 NDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNII  209 (251)
Q Consensus       158 ~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~  209 (251)
                          +.++...|+.+|+++++|++.++.++.+.|  |++++|+||++.|++.
T Consensus       140 ----~~~~~~~Y~~sK~~~~~~~~~l~~~~~~~~--i~v~~v~pg~i~~~~~  185 (248)
T PRK10538        140 ----PYAGGNVYGATKAFVRQFSLNLRTDLHGTA--VRVTDIEPGLVGGTEF  185 (248)
T ss_pred             ----CCCCCchhHHHHHHHHHHHHHHHHHhcCCC--cEEEEEeCCeeccccc
Confidence                566778999999999999999999999988  9999999999985554

>KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism]

Probab=100.00  E-value=8.8e-33  Score=216.03  Aligned_cols=181  Identities=27%  Similarity=0.303  Sum_probs=163.2

Q ss_pred             CEEEEECCC-ChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHh-cCC
Q 025509            1 MDIVITGAT-SGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNI-QHH   78 (251)
Q Consensus         1 k~vlItG~s-~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~-~~g   78 (251)
                      |.|||||+| ||||.++|++|++.||.|+.++|+.+...++..+       ..+..+.+|+++++++..+..++.. .+|
T Consensus         8 k~VlItgcs~GGIG~ala~ef~~~G~~V~AtaR~~e~M~~L~~~-------~gl~~~kLDV~~~~~V~~v~~evr~~~~G   80 (289)
T KOG1209|consen    8 KKVLITGCSSGGIGYALAKEFARNGYLVYATARRLEPMAQLAIQ-------FGLKPYKLDVSKPEEVVTVSGEVRANPDG   80 (289)
T ss_pred             CeEEEeecCCcchhHHHHHHHHhCCeEEEEEccccchHhhHHHh-------hCCeeEEeccCChHHHHHHHHHHhhCCCC
Confidence            579999988 9999999999999999999999988776666542       3588999999999999999999877 789


Q ss_pred             CeeEEEEcCCCC--CCCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCccccc
Q 025509           79 QLNILINNAGIM--GTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDK  156 (251)
Q Consensus        79 ~id~lv~~ag~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~  156 (251)
                      ++|+|+||||..  .|..+.+.++.++.|++|++|.+.+.+++...+.+.      .|.||+++|..+..          
T Consensus        81 kld~L~NNAG~~C~~Pa~d~~i~ave~~f~vNvfG~irM~~a~~h~lika------KGtIVnvgSl~~~v----------  144 (289)
T KOG1209|consen   81 KLDLLYNNAGQSCTFPALDATIAAVEQCFKVNVFGHIRMCRALSHFLIKA------KGTIVNVGSLAGVV----------  144 (289)
T ss_pred             ceEEEEcCCCCCcccccccCCHHHHHhhhccceeeeehHHHHHHHHHHHc------cceEEEecceeEEe----------
Confidence            999999999964  567788999999999999999999999999666653      79999999999887          


Q ss_pred             CCCCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccC
Q 025509          157 INDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  211 (251)
Q Consensus       157 ~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  211 (251)
                           |.|..+.|++||+|++++++.|+.|+.++|  |+|..+.||.|.|++...
T Consensus       145 -----pfpf~~iYsAsKAAihay~~tLrlEl~PFg--v~Vin~itGGv~T~Ia~k  192 (289)
T KOG1209|consen  145 -----PFPFGSIYSASKAAIHAYARTLRLELKPFG--VRVINAITGGVATDIADK  192 (289)
T ss_pred             -----ccchhhhhhHHHHHHHHhhhhcEEeeeccc--cEEEEecccceecccccC
Confidence                 788889999999999999999999999999  999999999999988664

>PRK08063 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=1.6e-31  Score=222.50  Aligned_cols=187  Identities=24%  Similarity=0.321  Sum_probs=164.3

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEE-EecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCC
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVM-GVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQ   79 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~-~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~   79 (251)
                      |++|||||++|||++++++|+++|++|++ .+|+....++..+++.+.  +.++.++.+|+++++++.++++++.+.+++
T Consensus         5 ~~vlItGa~g~iG~~~a~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   82 (250)
T PRK08063          5 KVALVTGSSRGIGKAIALRLAEEGYDIAVNYARSRKAAEETAEEIEAL--GRKALAVKANVGDVEKIKEMFAQIDEEFGR   82 (250)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhc--CCeEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            57999999999999999999999999876 578877777777666544  457889999999999999999999999999


Q ss_pred             eeEEEEcCCCC--CCCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccccC
Q 025509           80 LNILINNAGIM--GTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKI  157 (251)
Q Consensus        80 id~lv~~ag~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~  157 (251)
                      +|+||||||..  .+..+.+.++++..+++|+.+++.+++++++++.++     +.++||++||..+..           
T Consensus        83 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-----~~g~iv~~sS~~~~~-----------  146 (250)
T PRK08063         83 LDVFVNNAASGVLRPAMELEESHWDWTMNINAKALLFCAQEAAKLMEKV-----GGGKIISLSSLGSIR-----------  146 (250)
T ss_pred             CCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-----CCeEEEEEcchhhcc-----------
Confidence            99999999964  345667888999999999999999999999999875     468999999976654           


Q ss_pred             CCCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccC
Q 025509          158 NDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  211 (251)
Q Consensus       158 ~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  211 (251)
                          +.+.+..|+++|++++.|++++++++.+.|  |++++|+||++.|++...
T Consensus       147 ----~~~~~~~y~~sK~a~~~~~~~~~~~~~~~~--i~v~~i~pg~v~t~~~~~  194 (250)
T PRK08063        147 ----YLENYTTVGVSKAALEALTRYLAVELAPKG--IAVNAVSGGAVDTDALKH  194 (250)
T ss_pred             ----CCCCccHHHHHHHHHHHHHHHHHHHHhHhC--eEEEeEecCcccCchhhh
Confidence                566778999999999999999999999888  999999999999998654

>PRK07814 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.7e-31  Score=222.35  Aligned_cols=187  Identities=27%  Similarity=0.317  Sum_probs=164.7

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      |++|||||++|||.+++++|+++|++|++++|+.+.+++..+.+...  +..+.++.+|+++++++.++++++.+.++++
T Consensus        11 ~~vlItGasggIG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   88 (263)
T PRK07814         11 QVAVVTGAGRGLGAAIALAFAEAGADVLIAARTESQLDEVAEQIRAA--GRRAHVVAADLAHPEATAGLAGQAVEAFGRL   88 (263)
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            57999999999999999999999999999999988877777766543  4568889999999999999999999989999


Q ss_pred             eEEEEcCCCCC--CCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccccCC
Q 025509           81 NILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKIN  158 (251)
Q Consensus        81 d~lv~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~  158 (251)
                      |+||||||...  +..+.+.++++.++++|+.+++.+++++.++|.+.    ...++||++||..+..            
T Consensus        89 d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~----~~~g~iv~~sS~~~~~------------  152 (263)
T PRK07814         89 DIVVNNVGGTMPNPLLSTSTKDLADAFTFNVATAHALTVAAVPLMLEH----SGGGSVINISSTMGRL------------  152 (263)
T ss_pred             CEEEECCCCCCCCChhhCCHHHHHHHHHhhcHHHHHHHHHHHHHHHhh----cCCeEEEEEccccccC------------
Confidence            99999999643  35567888999999999999999999999999763    1468999999987765            


Q ss_pred             CCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccC
Q 025509          159 DPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  211 (251)
Q Consensus       159 ~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  211 (251)
                         +.++...|+++|+++++++++++.|+.+ +  |++++|+||++.|++...
T Consensus       153 ---~~~~~~~Y~~sK~a~~~~~~~~~~e~~~-~--i~v~~i~Pg~v~t~~~~~  199 (263)
T PRK07814        153 ---AGRGFAAYGTAKAALAHYTRLAALDLCP-R--IRVNAIAPGSILTSALEV  199 (263)
T ss_pred             ---CCCCCchhHHHHHHHHHHHHHHHHHHCC-C--ceEEEEEeCCCcCchhhh
Confidence               5667789999999999999999999976 5  999999999999998653

>PRK05693 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.5e-31  Score=225.89  Aligned_cols=180  Identities=28%  Similarity=0.340  Sum_probs=158.5

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      |++|||||++|||++++++|+++|++|++++|+.+..++..    +    ..+.++.+|+++.++++++++.+.+.++++
T Consensus         2 k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~----~----~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i   73 (274)
T PRK05693          2 PVVLITGCSSGIGRALADAFKAAGYEVWATARKAEDVEALA----A----AGFTAVQLDVNDGAALARLAEELEAEHGGL   73 (274)
T ss_pred             CEEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH----H----CCCeEEEeeCCCHHHHHHHHHHHHHhcCCC
Confidence            68999999999999999999999999999999876654432    1    236788999999999999999998888999


Q ss_pred             eEEEEcCCCCC--CCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccccCC
Q 025509           81 NILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKIN  158 (251)
Q Consensus        81 d~lv~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~  158 (251)
                      |++|||||...  +..+.+.++++..+++|+.+++.++++++|.+.+      ..++||++||..+..            
T Consensus        74 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~------~~g~iv~isS~~~~~------------  135 (274)
T PRK05693         74 DVLINNAGYGAMGPLLDGGVEAMRRQFETNVFAVVGVTRALFPLLRR------SRGLVVNIGSVSGVL------------  135 (274)
T ss_pred             CEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhh------cCCEEEEECCccccC------------
Confidence            99999999653  3556788999999999999999999999999875      258999999987765            


Q ss_pred             CCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccC
Q 025509          159 DPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  211 (251)
Q Consensus       159 ~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  211 (251)
                         +.+....|+++|++++.|+++++.|+.+.|  |+|++|+||+++|++.+.
T Consensus       136 ---~~~~~~~Y~~sK~al~~~~~~l~~e~~~~g--i~v~~v~pg~v~t~~~~~  183 (274)
T PRK05693        136 ---VTPFAGAYCASKAAVHALSDALRLELAPFG--VQVMEVQPGAIASQFASN  183 (274)
T ss_pred             ---CCCCccHHHHHHHHHHHHHHHHHHHhhhhC--eEEEEEecCccccccccc
Confidence               556678999999999999999999999988  999999999999998764

>PRK12938 acetyacetyl-CoA reductase; Provisional

Probab=100.00  E-value=1.6e-31  Score=222.13  Aligned_cols=187  Identities=27%  Similarity=0.332  Sum_probs=161.3

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEe-cCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCC
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGV-RDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQ   79 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~-r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~   79 (251)
                      |++|||||++|||+++|++|+++|++|++.. ++....++..+++.+.  +..+.++.+|+++.+++.++++++.+.+++
T Consensus         4 k~~lVtG~s~giG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   81 (246)
T PRK12938          4 RIAYVTGGMGGIGTSICQRLHKDGFKVVAGCGPNSPRRVKWLEDQKAL--GFDFIASEGNVGDWDSTKAAFDKVKAEVGE   81 (246)
T ss_pred             CEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCChHHHHHHHHHHHhc--CCcEEEEEcCCCCHHHHHHHHHHHHHHhCC
Confidence            6799999999999999999999999988754 4444555555544432  456888899999999999999999998999


Q ss_pred             eeEEEEcCCCCC--CCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccccC
Q 025509           80 LNILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKI  157 (251)
Q Consensus        80 id~lv~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~  157 (251)
                      +|+||||||...  +..+.+.++|++.+++|+.+++.++++++|++.++     ..++||++||..+..           
T Consensus        82 id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-----~~~~iv~isS~~~~~-----------  145 (246)
T PRK12938         82 IDVLVNNAGITRDVVFRKMTREDWTAVIDTNLTSLFNVTKQVIDGMVER-----GWGRIINISSVNGQK-----------  145 (246)
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc-----CCeEEEEEechhccC-----------
Confidence            999999999753  35577889999999999999999999999999774     357999999987665           


Q ss_pred             CCCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccC
Q 025509          158 NDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  211 (251)
Q Consensus       158 ~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  211 (251)
                          +.+++..|+++|++++.|+++++.++.+.|  |++++|+||++.|++...
T Consensus       146 ----~~~~~~~y~~sK~a~~~~~~~l~~~~~~~g--i~v~~i~pg~~~t~~~~~  193 (246)
T PRK12938        146 ----GQFGQTNYSTAKAGIHGFTMSLAQEVATKG--VTVNTVSPGYIGTDMVKA  193 (246)
T ss_pred             ----CCCCChhHHHHHHHHHHHHHHHHHHhhhhC--eEEEEEEecccCCchhhh
Confidence                566788999999999999999999999988  999999999999998764

>PRK06949 short chain dehydrogenase; Provisional

Probab=100.00  E-value=4.4e-31  Score=220.82  Aligned_cols=192  Identities=27%  Similarity=0.412  Sum_probs=166.4

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      |++|||||++|||+++++.|+++|++|++++|++++++++.+++...  ..++.++.+|+++.+++.++++++.+.++++
T Consensus        10 k~ilItGasg~IG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   87 (258)
T PRK06949         10 KVALVTGASSGLGARFAQVLAQAGAKVVLASRRVERLKELRAEIEAE--GGAAHVVSLDVTDYQSIKAAVAHAETEAGTI   87 (258)
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCcEEEEEecCCCHHHHHHHHHHHHHhcCCC
Confidence            68999999999999999999999999999999988888777766543  3468899999999999999999999889999


Q ss_pred             eEEEEcCCCCC--CCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhcc---CCCCceEEEEcCccccccccCCcccc
Q 025509           81 NILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARK---SGGEGRIINVSSEGHRLAYHEGIRFD  155 (251)
Q Consensus        81 d~lv~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~---~~~~g~iv~vsS~~~~~~~~~~~~~~  155 (251)
                      |++|||||...  +..+.+.++|+.++++|+.+++.++++++|.+.++...   ....+++|++||..+..         
T Consensus        88 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~---------  158 (258)
T PRK06949         88 DILVNNSGVSTTQKLVDVTPADFDFVFDTNTRGAFFVAQEVAKRMIARAKGAGNTKPGGRIINIASVAGLR---------  158 (258)
T ss_pred             CEEEECCCCCCCCCcccCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCcCCCCCCCeEEEEECcccccC---------
Confidence            99999999653  24456778999999999999999999999999875321   11247999999987654         


Q ss_pred             cCCCCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccC
Q 025509          156 KINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  211 (251)
Q Consensus       156 ~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  211 (251)
                            +.+...+|+.+|++++.++++++.++.++|  |+|++|+||+++|++...
T Consensus       159 ------~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~--i~v~~v~pG~v~t~~~~~  206 (258)
T PRK06949        159 ------VLPQIGLYCMSKAAVVHMTRAMALEWGRHG--INVNAICPGYIDTEINHH  206 (258)
T ss_pred             ------CCCCccHHHHHHHHHHHHHHHHHHHHHhcC--eEEEEEeeCCCcCCcchh
Confidence                  556778999999999999999999999988  999999999999998764

>PRK06500 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.8e-31  Score=220.77  Aligned_cols=182  Identities=26%  Similarity=0.346  Sum_probs=159.7

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      |++|||||++|||++++++|+++|++|++++|+.+.+++..+++     +.++.++++|+++.+++..+++.+.+.++++
T Consensus         7 k~vlItGasg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   81 (249)
T PRK06500          7 KTALITGGTSGIGLETARQFLAEGARVAITGRDPASLEAARAEL-----GESALVIRADAGDVAAQKALAQALAEAFGRL   81 (249)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHh-----CCceEEEEecCCCHHHHHHHHHHHHHHhCCC
Confidence            58999999999999999999999999999999876665554443     4568889999999999999999998888999


Q ss_pred             eEEEEcCCCCC--CCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccccCC
Q 025509           81 NILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKIN  158 (251)
Q Consensus        81 d~lv~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~  158 (251)
                      |++|||||...  +..+.+.++|++.+++|+.+++.++++++|+|..       .+++|+++|..+..            
T Consensus        82 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-------~~~~i~~~S~~~~~------------  142 (249)
T PRK06500         82 DAVFINAGVAKFAPLEDWDEAMFDRSFNTNVKGPYFLIQALLPLLAN-------PASIVLNGSINAHI------------  142 (249)
T ss_pred             CEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhc-------CCEEEEEechHhcc------------
Confidence            99999999653  3456788999999999999999999999999854       36899999877665            


Q ss_pred             CCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccC
Q 025509          159 DPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  211 (251)
Q Consensus       159 ~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  211 (251)
                         +.+...+|+.+|+++++|+++++.|+.+.|  |++++|+||+++|++.+.
T Consensus       143 ---~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g--i~v~~i~pg~~~t~~~~~  190 (249)
T PRK06500        143 ---GMPNSSVYAASKAALLSLAKTLSGELLPRG--IRVNAVSPGPVQTPLYGK  190 (249)
T ss_pred             ---CCCCccHHHHHHHHHHHHHHHHHHHhhhcC--eEEEEEeeCcCCCHHHHh
Confidence               566778999999999999999999999888  999999999999998653

>PRK08628 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.9e-31  Score=223.23  Aligned_cols=184  Identities=23%  Similarity=0.360  Sum_probs=160.4

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      |++|||||++|||+++|++|+++|++|++++|++... +..+++.+.  +.++.++.+|+++.+++.++++++...++++
T Consensus         8 ~~ilItGasggiG~~la~~l~~~G~~v~~~~r~~~~~-~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   84 (258)
T PRK08628          8 KVVIVTGGASGIGAAISLRLAEEGAIPVIFGRSAPDD-EFAEELRAL--QPRAEFVQVDLTDDAQCRDAVEQTVAKFGRI   84 (258)
T ss_pred             CEEEEeCCCChHHHHHHHHHHHcCCcEEEEcCChhhH-HHHHHHHhc--CCceEEEEccCCCHHHHHHHHHHHHHhcCCC
Confidence            5899999999999999999999999999999987765 555555443  4568999999999999999999999889999


Q ss_pred             eEEEEcCCCCCC-CCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccccCCC
Q 025509           81 NILINNAGIMGT-PFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKIND  159 (251)
Q Consensus        81 d~lv~~ag~~~~-~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~  159 (251)
                      |++|||||.... ..+.+.++|+..+++|+.+++.+++.++|.+.+.      .++|+++||..+..             
T Consensus        85 d~vi~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~------~~~iv~~ss~~~~~-------------  145 (258)
T PRK08628         85 DGLVNNAGVNDGVGLEAGREAFVASLERNLIHYYVMAHYCLPHLKAS------RGAIVNISSKTALT-------------  145 (258)
T ss_pred             CEEEECCcccCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHhhcc------CcEEEEECCHHhcc-------------
Confidence            999999996432 2333448899999999999999999999988753      57999999987765             


Q ss_pred             CCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCccc
Q 025509          160 PSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIR  210 (251)
Q Consensus       160 ~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~  210 (251)
                        +.+.+..|++||+++++++++++.|+.++|  |+|+.|+||.++|++.+
T Consensus       146 --~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~--i~v~~v~pg~v~t~~~~  192 (258)
T PRK08628        146 --GQGGTSGYAAAKGAQLALTREWAVALAKDG--VRVNAVIPAEVMTPLYE  192 (258)
T ss_pred             --CCCCCchhHHHHHHHHHHHHHHHHHHhhcC--eEEEEEecCccCCHHHH
Confidence              566778999999999999999999999888  99999999999999754

>PRK12937 short chain dehydrogenase; Provisional

Probab=100.00  E-value=6.5e-31  Score=218.09  Aligned_cols=185  Identities=30%  Similarity=0.415  Sum_probs=160.1

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCch-hHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCC
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIA-AGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQ   79 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~-~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~   79 (251)
                      |++|||||++|||+++|++|+++|++|+++.|+.. ..++..+++.+.  +.++.++.+|+++.++++++++++.+.+++
T Consensus         6 ~~vlItG~~~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   83 (245)
T PRK12937          6 KVAIVTGASRGIGAAIARRLAADGFAVAVNYAGSAAAADELVAEIEAA--GGRAIAVQADVADAAAVTRLFDAAETAFGR   83 (245)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHHHhc--CCeEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            57999999999999999999999999988877543 345555555433  457899999999999999999999999999


Q ss_pred             eeEEEEcCCCCC--CCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccccC
Q 025509           80 LNILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKI  157 (251)
Q Consensus        80 id~lv~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~  157 (251)
                      +|++|||||...  +..+.+.++|++++++|+.+++.++++++|.+.+       .++||++||..+..           
T Consensus        84 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~-------~~~iv~~ss~~~~~-----------  145 (245)
T PRK12937         84 IDVLVNNAGVMPLGTIADFDLEDFDRTIATNLRGAFVVLREAARHLGQ-------GGRIINLSTSVIAL-----------  145 (245)
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHHhcc-------CcEEEEEeeccccC-----------
Confidence            999999999753  3456778899999999999999999999999854       47999999976654           


Q ss_pred             CCCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccC
Q 025509          158 NDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  211 (251)
Q Consensus       158 ~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  211 (251)
                          +.+++..|+.+|++++.++++++.++.+.|  |+++.|+||+++|++...
T Consensus       146 ----~~~~~~~Y~~sK~a~~~~~~~~a~~~~~~~--i~v~~i~pg~~~t~~~~~  193 (245)
T PRK12937        146 ----PLPGYGPYAASKAAVEGLVHVLANELRGRG--ITVNAVAPGPVATELFFN  193 (245)
T ss_pred             ----CCCCCchhHHHHHHHHHHHHHHHHHhhhcC--eEEEEEEeCCccCchhcc
Confidence                667788999999999999999999999988  999999999999998643

>PRK09186 flagellin modification protein A; Provisional

Probab=100.00  E-value=3.3e-31  Score=221.35  Aligned_cols=196  Identities=26%  Similarity=0.291  Sum_probs=162.7

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      |++|||||++|||+++|+.|+++|++|++++|+++++++..+++....++..+.++++|++|++++.++++++.+.++++
T Consensus         5 k~vlItGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~~i   84 (256)
T PRK09186          5 KTILITGAGGLIGSALVKAILEAGGIVIAADIDKEALNELLESLGKEFKSKKLSLVELDITDQESLEEFLSKSAEKYGKI   84 (256)
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCCEEEEEecChHHHHHHHHHHHhhcCCCceeEEEecCCCHHHHHHHHHHHHHHcCCc
Confidence            68999999999999999999999999999999988888887777655444557778999999999999999999899999


Q ss_pred             eEEEEcCCCC-----CCCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccc
Q 025509           81 NILINNAGIM-----GTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFD  155 (251)
Q Consensus        81 d~lv~~ag~~-----~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~  155 (251)
                      |+|||||+..     .+..+.+.++++..+++|+.+++.++++++|+|+++     +.++||++||..+.......    
T Consensus        85 d~vi~~A~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-----~~~~iv~~sS~~~~~~~~~~----  155 (256)
T PRK09186         85 DGAVNCAYPRNKDYGKKFFDVSLDDFNENLSLHLGSSFLFSQQFAKYFKKQ-----GGGNLVNISSIYGVVAPKFE----  155 (256)
T ss_pred             cEEEECCccccccccCccccCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhc-----CCceEEEEechhhhccccch----
Confidence            9999999743     235567889999999999999999999999999875     45799999997765421000    


Q ss_pred             cCCCCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCc
Q 025509          156 KINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNI  208 (251)
Q Consensus       156 ~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~  208 (251)
                       .....+......|+++|+++++|+++++.|+.+.|  |+|++|+||.+.++.
T Consensus       156 -~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~--i~v~~i~Pg~~~~~~  205 (256)
T PRK09186        156 -IYEGTSMTSPVEYAAIKAGIIHLTKYLAKYFKDSN--IRVNCVSPGGILDNQ  205 (256)
T ss_pred             -hccccccCCcchhHHHHHHHHHHHHHHHHHhCcCC--eEEEEEecccccCCC
Confidence             00111122234799999999999999999999988  999999999998764

>PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional

Probab=100.00  E-value=1.6e-31  Score=224.68  Aligned_cols=177  Identities=28%  Similarity=0.369  Sum_probs=155.7

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      |++|||||++|||++++++|+++|++|++++|++....           ...+.++++|++++++++++++++.+.++++
T Consensus        10 k~vlItG~s~gIG~~la~~l~~~G~~v~~~~~~~~~~~-----------~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i   78 (266)
T PRK06171         10 KIIIVTGGSSGIGLAIVKELLANGANVVNADIHGGDGQ-----------HENYQFVPTDVSSAEEVNHTVAEIIEKFGRI   78 (266)
T ss_pred             CEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCccccc-----------cCceEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            68999999999999999999999999999999865421           2367889999999999999999999999999


Q ss_pred             eEEEEcCCCCCC-----------CCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCcccccccc
Q 025509           81 NILINNAGIMGT-----------PFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYH  149 (251)
Q Consensus        81 d~lv~~ag~~~~-----------~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~  149 (251)
                      |++|||||...+           ..+.+.++|++++++|+.+++.+++++.++|.++     ..++||++||..+..   
T Consensus        79 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-----~~g~iv~isS~~~~~---  150 (266)
T PRK06171         79 DGLVNNAGINIPRLLVDEKDPAGKYELNEAAFDKMFNINQKGVFLMSQAVARQMVKQ-----HDGVIVNMSSEAGLE---  150 (266)
T ss_pred             CEEEECCcccCCccccccccccccccCCHHHHHHHHhhhchhHHHHHHHHHHHHHhc-----CCcEEEEEccccccC---
Confidence            999999996422           1346789999999999999999999999999875     468999999987765   


Q ss_pred             CCcccccCCCCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccc-CCccc
Q 025509          150 EGIRFDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIA-TNIIR  210 (251)
Q Consensus       150 ~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~-t~~~~  210 (251)
                                  +.++...|+++|+++++|+++++.|+.+.|  |+||+|+||++. |++..
T Consensus       151 ------------~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g--i~v~~v~pG~~~~t~~~~  198 (266)
T PRK06171        151 ------------GSEGQSCYAATKAALNSFTRSWAKELGKHN--IRVVGVAPGILEATGLRT  198 (266)
T ss_pred             ------------CCCCCchhHHHHHHHHHHHHHHHHHhhhcC--eEEEEEeccccccCCCcC
Confidence                        566778999999999999999999999999  999999999997 66543

>PRK12939 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.1e-30  Score=217.19  Aligned_cols=188  Identities=30%  Similarity=0.397  Sum_probs=166.8

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      |++|||||++|||.++|+.|+++|++|++++|+++++++..++++..  +.++.++.+|+++.++++++++++.+.++++
T Consensus         8 ~~vlItGa~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i   85 (250)
T PRK12939          8 KRALVTGAARGLGAAFAEALAEAGATVAFNDGLAAEARELAAALEAA--GGRAHAIAADLADPASVQRFFDAAAAALGGL   85 (250)
T ss_pred             CEEEEeCCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhc--CCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            57999999999999999999999999999999988888777776543  4578999999999999999999999888999


Q ss_pred             eEEEEcCCCCC--CCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccccCC
Q 025509           81 NILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKIN  158 (251)
Q Consensus        81 d~lv~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~  158 (251)
                      |++|||+|...  +..+.+.++++..+++|+.+++.+++++.|.+.++     +.+++|++||..+..            
T Consensus        86 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-----~~g~iv~isS~~~~~------------  148 (250)
T PRK12939         86 DGLVNNAGITNSKSATELDIDTWDAVMNVNVRGTFLMLRAALPHLRDS-----GRGRIVNLASDTALW------------  148 (250)
T ss_pred             CEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc-----CCeEEEEECchhhcc------------
Confidence            99999999753  24567788999999999999999999999998775     468999999977665            


Q ss_pred             CCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCC
Q 025509          159 DPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRHN  212 (251)
Q Consensus       159 ~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~~  212 (251)
                         +.+....|+++|++++.++++++.++.+.+  |++++|+||+++|++.+..
T Consensus       149 ---~~~~~~~y~~sK~~~~~~~~~l~~~~~~~~--i~v~~v~pg~v~t~~~~~~  197 (250)
T PRK12939        149 ---GAPKLGAYVASKGAVIGMTRSLARELGGRG--ITVNAIAPGLTATEATAYV  197 (250)
T ss_pred             ---CCCCcchHHHHHHHHHHHHHHHHHHHhhhC--EEEEEEEECCCCCcccccc
Confidence               566677899999999999999999999888  9999999999999997653

>PRK06947 glucose-1-dehydrogenase; Provisional

Probab=100.00  E-value=1.1e-30  Score=217.18  Aligned_cols=190  Identities=31%  Similarity=0.394  Sum_probs=160.3

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEe-cCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCC
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGV-RDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQ   79 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~-r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~   79 (251)
                      |++|||||++|||.++|+.|+++|++|+++. |+++.++...+++...  +.++.++++|+++.++++++++++.+.+++
T Consensus         3 k~ilItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   80 (248)
T PRK06947          3 KVVLITGASRGIGRATAVLAAARGWSVGINYARDAAAAEETADAVRAA--GGRACVVAGDVANEADVIAMFDAVQSAFGR   80 (248)
T ss_pred             cEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhc--CCcEEEEEeccCCHHHHHHHHHHHHHhcCC
Confidence            5899999999999999999999999998765 5666666666655432  457899999999999999999999888899


Q ss_pred             eeEEEEcCCCCC---CCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCccccc
Q 025509           80 LNILINNAGIMG---TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDK  156 (251)
Q Consensus        80 id~lv~~ag~~~---~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~  156 (251)
                      +|++|||||...   +..+.+.++++..+++|+.+++.+++.+++.+..+.+  ++.++||++||.++..          
T Consensus        81 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~--~~~~~ii~~sS~~~~~----------  148 (248)
T PRK06947         81 LDALVNNAGIVAPSMPLADMDAARLRRMFDTNVLGAYLCAREAARRLSTDRG--GRGGAIVNVSSIASRL----------  148 (248)
T ss_pred             CCEEEECCccCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCC--CCCcEEEEECchhhcC----------
Confidence            999999999753   2456788899999999999999999999999876421  1257899999987765          


Q ss_pred             CCCCCCCC-cccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccC
Q 025509          157 INDPSGYN-GFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  211 (251)
Q Consensus       157 ~~~~~~~~-~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  211 (251)
                           +.+ .+..|+++|+++++|+++++.++.+.|  |+|+.|+||+++|++...
T Consensus       149 -----~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~--i~v~~i~Pg~v~t~~~~~  197 (248)
T PRK06947        149 -----GSPNEYVDYAGSKGAVDTLTLGLAKELGPHG--VRVNAVRPGLIETEIHAS  197 (248)
T ss_pred             -----CCCCCCcccHhhHHHHHHHHHHHHHHhhhhC--cEEEEEeccCcccccccc
Confidence                 223 346899999999999999999999888  999999999999998653

>PRK07774 short chain dehydrogenase; Provisional

Probab=100.00  E-value=7e-31  Score=218.62  Aligned_cols=185  Identities=28%  Similarity=0.330  Sum_probs=161.3

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      |++|||||++|||.+++++|+++|++|++++|++...++..+++.+.  +..+.++.+|+++.++++++++++.+.++++
T Consensus         7 k~vlItGasg~iG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i   84 (250)
T PRK07774          7 KVAIVTGAAGGIGQAYAEALAREGASVVVADINAEGAERVAKQIVAD--GGTAIAVQVDVSDPDSAKAMADATVSAFGGI   84 (250)
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCcEEEEEcCCCCHHHHHHHHHHHHHHhCCC
Confidence            57999999999999999999999999999999987777766665543  3467789999999999999999999888999


Q ss_pred             eEEEEcCCCCC-----CCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccc
Q 025509           81 NILINNAGIMG-----TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFD  155 (251)
Q Consensus        81 d~lv~~ag~~~-----~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~  155 (251)
                      |+||||||...     +..+.+++++++.+++|+.+++.++++++|.+.+.     +.++||++||.++.          
T Consensus        85 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-----~~~~iv~~sS~~~~----------  149 (250)
T PRK07774         85 DYLVNNAAIYGGMKLDLLITVPWDYYKKFMSVNLDGALVCTRAVYKHMAKR-----GGGAIVNQSSTAAW----------  149 (250)
T ss_pred             CEEEECCCCcCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHh-----CCcEEEEEeccccc----------
Confidence            99999999743     23456788999999999999999999999999775     46899999997643          


Q ss_pred             cCCCCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCC
Q 025509          156 KINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRHN  212 (251)
Q Consensus       156 ~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~~  212 (251)
                              .+.+.|++||++++.+++++++++.+.|  |+++.++||.++|++....
T Consensus       150 --------~~~~~Y~~sK~a~~~~~~~l~~~~~~~~--i~v~~v~pg~~~t~~~~~~  196 (250)
T PRK07774        150 --------LYSNFYGLAKVGLNGLTQQLARELGGMN--IRVNAIAPGPIDTEATRTV  196 (250)
T ss_pred             --------CCccccHHHHHHHHHHHHHHHHHhCccC--eEEEEEecCcccCcccccc
Confidence                    2456899999999999999999999888  9999999999999987643

>PRK08703 short chain dehydrogenase; Provisional

Probab=100.00  E-value=4.6e-31  Score=218.57  Aligned_cols=188  Identities=21%  Similarity=0.242  Sum_probs=162.2

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCC--HHHHHHHHHHHHhcC-
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSS--LASVRNFASEYNIQH-   77 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~--~~~i~~~~~~~~~~~-   77 (251)
                      |+++||||++|||+++++.|+++|++|++++|+++.+++..+++.+.. +..+.++++|+++  .+++.++++++.+.+ 
T Consensus         7 k~vlItG~sggiG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~i~~~~~   85 (239)
T PRK08703          7 KTILVTGASQGLGEQVAKAYAAAGATVILVARHQKKLEKVYDAIVEAG-HPEPFAIRFDLMSAEEKEFEQFAATIAEATQ   85 (239)
T ss_pred             CEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCChHHHHHHHHHHHHcC-CCCcceEEeeecccchHHHHHHHHHHHHHhC
Confidence            579999999999999999999999999999999988877777765432 3457788999985  578899999888877 


Q ss_pred             CCeeEEEEcCCCC---CCCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCccc
Q 025509           78 HQLNILINNAGIM---GTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRF  154 (251)
Q Consensus        78 g~id~lv~~ag~~---~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~  154 (251)
                      +++|++|||||..   .+..+.+.++|++.+++|+.+++.++++++|.+.+.     +.++++++||..+..        
T Consensus        86 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~-----~~~~iv~~ss~~~~~--------  152 (239)
T PRK08703         86 GKLDGIVHCAGYFYALSPLDFQTVAEWVNQYRINTVAPMGLTRALFPLLKQS-----PDASVIFVGESHGET--------  152 (239)
T ss_pred             CCCCEEEEeccccccCCCccccCHHHHHHHHHHhhhHHHHHHHHHHHHHHhC-----CCCEEEEEecccccc--------
Confidence            7899999999964   245677889999999999999999999999998764     468999999976654        


Q ss_pred             ccCCCCCCCCcccccchhHHHHHHHHHHHHHHhccC-CCcEEEEEeeCCcccCCcccC
Q 025509          155 DKINDPSGYNGFRAYSQSKLANILHANELARRLKED-GVDITANSVHPGAIATNIIRH  211 (251)
Q Consensus       155 ~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~-g~~i~v~~v~Pg~v~t~~~~~  211 (251)
                             +.+.+..|++||++++.|+++++.|+.++ +  |+|++|+||+++|++...
T Consensus       153 -------~~~~~~~Y~~sKaa~~~~~~~la~e~~~~~~--i~v~~v~pG~v~t~~~~~  201 (239)
T PRK08703        153 -------PKAYWGGFGASKAALNYLCKVAADEWERFGN--LRANVLVPGPINSPQRIK  201 (239)
T ss_pred             -------CCCCccchHHhHHHHHHHHHHHHHHhccCCC--eEEEEEecCcccCccccc
Confidence                   56677899999999999999999999876 5  999999999999998653

>PRK07576 short chain dehydrogenase; Provisional

Probab=100.00  E-value=4.1e-31  Score=222.28  Aligned_cols=184  Identities=19%  Similarity=0.226  Sum_probs=161.2

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      |++|||||++|||.+++++|+++|++|++++|+.+.+++..+++.+.  +.++.++.+|++++++++++++++...++++
T Consensus        10 k~ilItGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~i~~~~~~~~~~~~~i   87 (264)
T PRK07576         10 KNVVVVGGTSGINLGIAQAFARAGANVAVASRSQEKVDAAVAQLQQA--GPEGLGVSADVRDYAAVEAAFAQIADEFGPI   87 (264)
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHh--CCceEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence            58999999999999999999999999999999988777766666543  3467889999999999999999998888999


Q ss_pred             eEEEEcCCCCC--CCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccccCC
Q 025509           81 NILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKIN  158 (251)
Q Consensus        81 d~lv~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~  158 (251)
                      |++|||||...  +..+.+.++|++.+++|+.+++.++++++|++.++      +|+|+++||..+..            
T Consensus        88 D~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~------~g~iv~iss~~~~~------------  149 (264)
T PRK07576         88 DVLVSGAAGNFPAPAAGMSANGFKTVVDIDLLGTFNVLKAAYPLLRRP------GASIIQISAPQAFV------------  149 (264)
T ss_pred             CEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhC------CCEEEEECChhhcc------------
Confidence            99999998542  35567788999999999999999999999998753      58999999987655            


Q ss_pred             CCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccc-CCcc
Q 025509          159 DPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIA-TNII  209 (251)
Q Consensus       159 ~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~-t~~~  209 (251)
                         +.+++..|+++|++++.|+++++.|+.++|  |+|+.|+||+++ |+..
T Consensus       150 ---~~~~~~~Y~asK~a~~~l~~~la~e~~~~g--i~v~~v~pg~~~~t~~~  196 (264)
T PRK07576        150 ---PMPMQAHVCAAKAGVDMLTRTLALEWGPEG--IRVNSIVPGPIAGTEGM  196 (264)
T ss_pred             ---CCCCccHHHHHHHHHHHHHHHHHHHhhhcC--eEEEEEecccccCcHHH
Confidence               567788999999999999999999999988  999999999997 5543

>PRK07856 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.7e-31  Score=221.71  Aligned_cols=179  Identities=24%  Similarity=0.272  Sum_probs=156.9

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      |++|||||++|||++++++|+++|++|++++|+.+.     .     ..+..+.++++|+++.++++++++.+.+.++++
T Consensus         7 k~~lItGas~gIG~~la~~l~~~g~~v~~~~r~~~~-----~-----~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   76 (252)
T PRK07856          7 RVVLVTGGTRGIGAGIARAFLAAGATVVVCGRRAPE-----T-----VDGRPAEFHAADVRDPDQVAALVDAIVERHGRL   76 (252)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCChhh-----h-----hcCCceEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            689999999999999999999999999999998644     0     114568899999999999999999999999999


Q ss_pred             eEEEEcCCCCC--CCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccccCC
Q 025509           81 NILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKIN  158 (251)
Q Consensus        81 d~lv~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~  158 (251)
                      |+||||||...  +..+.+.++|++.+++|+.+++.+++++.++|.++    ...++||++||..+..            
T Consensus        77 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~----~~~g~ii~isS~~~~~------------  140 (252)
T PRK07856         77 DVLVNNAGGSPYALAAEASPRFHEKIVELNLLAPLLVAQAANAVMQQQ----PGGGSIVNIGSVSGRR------------  140 (252)
T ss_pred             CEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc----CCCcEEEEEcccccCC------------
Confidence            99999999753  34567788999999999999999999999999764    1358999999987765            


Q ss_pred             CCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccC
Q 025509          159 DPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  211 (251)
Q Consensus       159 ~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  211 (251)
                         +.+++..|+++|+++++|+++++.|+.+.   |++|+|+||+++|++...
T Consensus       141 ---~~~~~~~Y~~sK~a~~~l~~~la~e~~~~---i~v~~i~Pg~v~t~~~~~  187 (252)
T PRK07856        141 ---PSPGTAAYGAAKAGLLNLTRSLAVEWAPK---VRVNAVVVGLVRTEQSEL  187 (252)
T ss_pred             ---CCCCCchhHHHHHHHHHHHHHHHHHhcCC---eEEEEEEeccccChHHhh
Confidence               66778899999999999999999999864   999999999999998653

>PRK06701 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.3e-30  Score=222.15  Aligned_cols=185  Identities=29%  Similarity=0.331  Sum_probs=160.1

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchh-HHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCC
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAA-GKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQ   79 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~-~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~   79 (251)
                      |++|||||++|||.++|++|+++|++|++++|+... .+...+.+...  +.++.++.+|+++.+++.++++++.+.+++
T Consensus        47 k~iLItGasggIG~~la~~l~~~G~~V~l~~r~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~i~~~~~~  124 (290)
T PRK06701         47 KVALITGGDSGIGRAVAVLFAKEGADIAIVYLDEHEDANETKQRVEKE--GVKCLLIPGDVSDEAFCKDAVEETVRELGR  124 (290)
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhc--CCeEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            579999999999999999999999999999997543 44444444322  456889999999999999999999888899


Q ss_pred             eeEEEEcCCCCC---CCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCccccc
Q 025509           80 LNILINNAGIMG---TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDK  156 (251)
Q Consensus        80 id~lv~~ag~~~---~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~  156 (251)
                      +|+||||||...   +..+.+.++|+..+++|+.+++.+++++++.|.+       .++||++||..+..          
T Consensus       125 iD~lI~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~a~~~~~~~-------~g~iV~isS~~~~~----------  187 (290)
T PRK06701        125 LDILVNNAAFQYPQQSLEDITAEQLDKTFKTNIYSYFHMTKAALPHLKQ-------GSAIINTGSITGYE----------  187 (290)
T ss_pred             CCEEEECCcccCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHhh-------CCeEEEEecccccC----------
Confidence            999999999642   3556788999999999999999999999999854       47999999987765          


Q ss_pred             CCCCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccC
Q 025509          157 INDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  211 (251)
Q Consensus       157 ~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  211 (251)
                           +.+.+..|+++|+|++.|+++++.++.+.|  |+|++|+||+++|++...
T Consensus       188 -----~~~~~~~Y~~sK~a~~~l~~~la~~~~~~g--Irv~~i~pG~v~T~~~~~  235 (290)
T PRK06701        188 -----GNETLIDYSATKGAIHAFTRSLAQSLVQKG--IRVNAVAPGPIWTPLIPS  235 (290)
T ss_pred             -----CCCCcchhHHHHHHHHHHHHHHHHHhhhcC--eEEEEEecCCCCCccccc
Confidence                 556678999999999999999999999988  999999999999998754

>PRK06914 short chain dehydrogenase; Provisional

Probab=100.00  E-value=4.9e-31  Score=223.38  Aligned_cols=188  Identities=28%  Similarity=0.374  Sum_probs=164.7

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      |++|||||++|||+++++.|+++|++|++++|+.+..++..+.+.....+..+.++.+|++|+++++. ++++.+.++++
T Consensus         4 k~~lItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~-~~~~~~~~~~i   82 (280)
T PRK06914          4 KIAIVTGASSGFGLLTTLELAKKGYLVIATMRNPEKQENLLSQATQLNLQQNIKVQQLDVTDQNSIHN-FQLVLKEIGRI   82 (280)
T ss_pred             CEEEEECCCchHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceeEEecCCCCHHHHHH-HHHHHHhcCCe
Confidence            57999999999999999999999999999999988777776665543324578999999999999999 99988888999


Q ss_pred             eEEEEcCCCCCC--CCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccccCC
Q 025509           81 NILINNAGIMGT--PFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKIN  158 (251)
Q Consensus        81 d~lv~~ag~~~~--~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~  158 (251)
                      |++|||||...+  ..+.+.+++++.+++|+.+++.++++++|+|+++     +.++||++||..+..            
T Consensus        83 d~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-----~~~~iv~vsS~~~~~------------  145 (280)
T PRK06914         83 DLLVNNAGYANGGFVEEIPVEEYRKQFETNVFGAISVTQAVLPYMRKQ-----KSGKIINISSISGRV------------  145 (280)
T ss_pred             eEEEECCcccccCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-----CCCEEEEECcccccC------------
Confidence            999999997543  4566788999999999999999999999999775     467999999977665            


Q ss_pred             CCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccC
Q 025509          159 DPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  211 (251)
Q Consensus       159 ~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  211 (251)
                         +.+++..|+.+|+++++|+++++.|+.++|  |+++.|+||+++|++...
T Consensus       146 ---~~~~~~~Y~~sK~~~~~~~~~l~~~~~~~~--i~v~~v~pg~~~t~~~~~  193 (280)
T PRK06914        146 ---GFPGLSPYVSSKYALEGFSESLRLELKPFG--IDVALIEPGSYNTNIWEV  193 (280)
T ss_pred             ---CCCCCchhHHhHHHHHHHHHHHHHHhhhhC--CEEEEEecCCcccchhhc
Confidence               566778999999999999999999999988  999999999999998653

>PRK06482 short chain dehydrogenase; Provisional

Probab=100.00  E-value=5.2e-31  Score=222.84  Aligned_cols=184  Identities=29%  Similarity=0.391  Sum_probs=160.6

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      |++|||||+||||++++++|+++|++|++++|+++.+++..+..     +..+.++++|+++.+++.++++++.+.++++
T Consensus         3 k~vlVtGasg~IG~~la~~L~~~g~~v~~~~r~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   77 (276)
T PRK06482          3 KTWFITGASSGFGRGMTERLLARGDRVAATVRRPDALDDLKARY-----GDRLWVLQLDVTDSAAVRAVVDRAFAALGRI   77 (276)
T ss_pred             CEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhc-----cCceEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            57999999999999999999999999999999876665544332     3468899999999999999999988888899


Q ss_pred             eEEEEcCCCCC--CCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccccCC
Q 025509           81 NILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKIN  158 (251)
Q Consensus        81 d~lv~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~  158 (251)
                      |+||||||...  +..+.+.+++++.+++|+.+++.++++++|+++++     +.++||++||..+..            
T Consensus        78 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~-----~~~~iv~~sS~~~~~------------  140 (276)
T PRK06482         78 DVVVSNAGYGLFGAAEELSDAQIRRQIDTNLIGSIQVIRAALPHLRRQ-----GGGRIVQVSSEGGQI------------  140 (276)
T ss_pred             CEEEECCCCCCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-----CCCEEEEEcCccccc------------
Confidence            99999999753  34566788899999999999999999999999875     467999999977654            


Q ss_pred             CCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccC
Q 025509          159 DPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  211 (251)
Q Consensus       159 ~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  211 (251)
                         +.++...|+.||++++.|+++++.++.+.|  |+++.++||.+.|++...
T Consensus       141 ---~~~~~~~Y~~sK~a~~~~~~~l~~~~~~~g--i~v~~v~pg~~~t~~~~~  188 (276)
T PRK06482        141 ---AYPGFSLYHATKWGIEGFVEAVAQEVAPFG--IEFTIVEPGPARTNFGAG  188 (276)
T ss_pred             ---CCCCCchhHHHHHHHHHHHHHHHHHhhccC--cEEEEEeCCccccCCccc
Confidence               566778999999999999999999999888  999999999999988543

>PRK06123 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.6e-30  Score=216.18  Aligned_cols=190  Identities=32%  Similarity=0.420  Sum_probs=158.8

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEec-CchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCC
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVR-DIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQ   79 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r-~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~   79 (251)
                      |++|||||++|||.+++++|+++|++|+++.+ +++..++..+.+...  +..+.++.+|+++.++++++++++.+.+++
T Consensus         3 ~~~lVtG~~~~iG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   80 (248)
T PRK06123          3 KVMIITGASRGIGAATALLAAERGYAVCLNYLRNRDAAEAVVQAIRRQ--GGEALAVAADVADEADVLRLFEAVDRELGR   80 (248)
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCCeEEEecCCCHHHHHHHHHHHHhC--CCcEEEEEeccCCHHHHHHHHHHHHHHhCC
Confidence            57999999999999999999999999988774 444555555555432  456888999999999999999999999999


Q ss_pred             eeEEEEcCCCCC---CCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCccccc
Q 025509           80 LNILINNAGIMG---TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDK  156 (251)
Q Consensus        80 id~lv~~ag~~~---~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~  156 (251)
                      +|+||||||...   +..+.++++|++.+++|+.+++.+++++++.+.++.+  +..|+||++||.++..          
T Consensus        81 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~--~~~g~iv~~sS~~~~~----------  148 (248)
T PRK06123         81 LDALVNNAGILEAQMRLEQMDAARLTRIFATNVVGSFLCAREAVKRMSTRHG--GRGGAIVNVSSMAARL----------  148 (248)
T ss_pred             CCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCC--CCCeEEEEECchhhcC----------
Confidence            999999999753   2456688899999999999999999999999876411  1247899999987665          


Q ss_pred             CCCCCCCCc-ccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccC
Q 025509          157 INDPSGYNG-FRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  211 (251)
Q Consensus       157 ~~~~~~~~~-~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  211 (251)
                           +.+. +..|+++|+++++|+++++.++.+.|  |+|+.|+||++.|++...
T Consensus       149 -----~~~~~~~~Y~~sKaa~~~~~~~la~~~~~~~--i~v~~i~pg~v~~~~~~~  197 (248)
T PRK06123        149 -----GSPGEYIDYAASKGAIDTMTIGLAKEVAAEG--IRVNAVRPGVIYTEIHAS  197 (248)
T ss_pred             -----CCCCCccchHHHHHHHHHHHHHHHHHhcccC--eEEEEEecCcccCchhhc
Confidence                 3333 35799999999999999999999888  999999999999997553

>TIGR01831 fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductase, putative

Probab=100.00  E-value=4.9e-31  Score=218.23  Aligned_cols=186  Identities=24%  Similarity=0.342  Sum_probs=159.7

Q ss_pred             EEEECCCChhHHHHHHHHHHcCCEEEEEecC-chhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCee
Q 025509            3 IVITGATSGIGTETARVLALRGVHVVMGVRD-IAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQLN   81 (251)
Q Consensus         3 vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~-~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~id   81 (251)
                      +|||||++|||+++|++|+++|++|++++|+ .+..++..+++.+.  +.++.++++|+++.+++.++++++.+.++++|
T Consensus         1 vlItGas~giG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i~   78 (239)
T TIGR01831         1 VLVTGASRGIGRAIANRLAADGFEICVHYHSGRSDAESVVSAIQAQ--GGNARLLQFDVADRVACRTLLEADIAEHGAYY   78 (239)
T ss_pred             CEEeCCCchHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHc--CCeEEEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence            6899999999999999999999999988865 44556666666543  45789999999999999999999888899999


Q ss_pred             EEEEcCCCCCC--CCcCCchhhHHHHHHHHHHHHHHHHHHH-HHHHHhhccCCCCceEEEEcCccccccccCCcccccCC
Q 025509           82 ILINNAGIMGT--PFMLSKDNIELQFATNHLGHFLLTNLLL-DTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKIN  158 (251)
Q Consensus        82 ~lv~~ag~~~~--~~~~~~~~~~~~~~~n~~~~~~l~~~~~-~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~  158 (251)
                      ++|||+|....  +.+.+.++|+..+++|+.+++.++++++ |.+.++     ..++||++||.++..            
T Consensus        79 ~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-----~~~~iv~vsS~~~~~------------  141 (239)
T TIGR01831        79 GVVLNAGITRDAAFPALSEEDWDIVIHTNLDGFYNVIHPCTMPMIRAR-----QGGRIITLASVSGVM------------  141 (239)
T ss_pred             EEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhc-----CCeEEEEEcchhhcc------------
Confidence            99999997543  4567889999999999999999999876 444433     358999999988766            


Q ss_pred             CCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCC
Q 025509          159 DPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRHN  212 (251)
Q Consensus       159 ~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~~  212 (251)
                         +.+++..|+++|+++++++++++.|+.++|  |+++.|+||+++|++....
T Consensus       142 ---~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g--i~v~~v~Pg~v~t~~~~~~  190 (239)
T TIGR01831       142 ---GNRGQVNYSAAKAGLIGATKALAVELAKRK--ITVNCIAPGLIDTEMLAEV  190 (239)
T ss_pred             ---CCCCCcchHHHHHHHHHHHHHHHHHHhHhC--eEEEEEEEccCccccchhh
Confidence               667788999999999999999999999988  9999999999999997743

This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found.

>PRK07453 protochlorophyllide oxidoreductase; Validated

Probab=100.00  E-value=1.8e-30  Score=224.42  Aligned_cols=205  Identities=34%  Similarity=0.541  Sum_probs=163.4

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      |++|||||++|||++++++|+++|++|++++|+.+++++..+++..  ++..+.++.+|+++.++++++++++.+.++++
T Consensus         7 k~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~--~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~i   84 (322)
T PRK07453          7 GTVIITGASSGVGLYAAKALAKRGWHVIMACRNLKKAEAAAQELGI--PPDSYTIIHIDLGDLDSVRRFVDDFRALGKPL   84 (322)
T ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhc--cCCceEEEEecCCCHHHHHHHHHHHHHhCCCc
Confidence            5799999999999999999999999999999998888877776642  24568899999999999999999988777899


Q ss_pred             eEEEEcCCCCCC---CCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCC------
Q 025509           81 NILINNAGIMGT---PFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEG------  151 (251)
Q Consensus        81 d~lv~~ag~~~~---~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~------  151 (251)
                      |+||||||+..+   ..+.+.++++..+++|+.|++.++++++|.|+++..   ..+|||++||.........+      
T Consensus        85 D~li~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~---~~~riV~vsS~~~~~~~~~~~~~~~~  161 (322)
T PRK07453         85 DALVCNAAVYMPLLKEPLRSPQGYELSMATNHLGHFLLCNLLLEDLKKSPA---PDPRLVILGTVTANPKELGGKIPIPA  161 (322)
T ss_pred             cEEEECCcccCCCCCCCCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHhCCC---CCceEEEEcccccCccccCCccCCCC
Confidence            999999997543   235678899999999999999999999999987511   13699999997654321110      


Q ss_pred             -cccccCC-------------CCCCCCcccccchhHHHHHHHHHHHHHHhc-cCCCcEEEEEeeCCcc-cCCcccCC
Q 025509          152 -IRFDKIN-------------DPSGYNGFRAYSQSKLANILHANELARRLK-EDGVDITANSVHPGAI-ATNIIRHN  212 (251)
Q Consensus       152 -~~~~~~~-------------~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~-~~g~~i~v~~v~Pg~v-~t~~~~~~  212 (251)
                       ..+.++.             ...+..+..+|+.||.++..+++.+++++. ..|  |++++|+||+| .|++.+..
T Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~~~~~~g--i~v~~v~PG~v~~t~~~~~~  236 (322)
T PRK07453        162 PADLGDLSGFEAGFKAPISMADGKKFKPGKAYKDSKLCNMLTMRELHRRYHESTG--ITFSSLYPGCVADTPLFRNT  236 (322)
T ss_pred             ccchhhhhcchhcccccccccCccCCCccchhhHhHHHHHHHHHHHHHhhcccCC--eEEEEecCCcccCCcccccC
Confidence             0111110             112334567899999999999999999995 357  99999999999 58887653

>TIGR02685 pter_reduc_Leis pteridine reductase

Probab=100.00  E-value=4.6e-31  Score=222.26  Aligned_cols=190  Identities=21%  Similarity=0.203  Sum_probs=152.4

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEec-CchhHHHHHHHHHhhCCCCceEEEEecCCCHHHH----HHHHHHHHh
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVR-DIAAGKDVKETIVKEIPSAKVDAMELDLSSLASV----RNFASEYNI   75 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r-~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i----~~~~~~~~~   75 (251)
                      ++++||||++|||++++++|+++|++|++++| +++.+++..+++.+.. +..+.++.+|++|.+++    +++++++.+
T Consensus         2 ~~~lITGas~gIG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~Dv~d~~~~~~~~~~~~~~~~~   80 (267)
T TIGR02685         2 PAAVVTGAAKRIGSSIAVALHQEGYRVVLHYHRSAAAASTLAAELNARR-PNSAVTCQADLSNSATLFSRCEAIIDACFR   80 (267)
T ss_pred             CEEEEeCCCCcHHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHHHhcc-CCceEEEEccCCCchhhHHHHHHHHHHHHH
Confidence            47999999999999999999999999998765 4566666666664433 34577899999999865    566666677


Q ss_pred             cCCCeeEEEEcCCCCCC--CCcCCc-----------hhhHHHHHHHHHHHHHHHHHHHHHHHHhhc-cCCCCceEEEEcC
Q 025509           76 QHHQLNILINNAGIMGT--PFMLSK-----------DNIELQFATNHLGHFLLTNLLLDTMKKTAR-KSGGEGRIINVSS  141 (251)
Q Consensus        76 ~~g~id~lv~~ag~~~~--~~~~~~-----------~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~-~~~~~g~iv~vsS  141 (251)
                      .++++|+||||||...+  ..+.+.           ++|++++++|+.+++.+++++.|++..+.. .....++|++++|
T Consensus        81 ~~g~iD~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~~s  160 (267)
T TIGR02685        81 AFGRCDVLVNNASAFYPTPLLRGDAGEGVGDKKSLEVQVAELFGSNAIAPYFLIKAFAQRQAGTRAEQRSTNLSIVNLCD  160 (267)
T ss_pred             ccCCceEEEECCccCCCCcccccccccccccchhhHHHHHHHHHhhhHHHHHHHHHHHHHhhhcccccCCCCeEEEEehh
Confidence            88999999999997532  222232           258899999999999999999999865321 1123578999999


Q ss_pred             ccccccccCCcccccCCCCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCc
Q 025509          142 EGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNI  208 (251)
Q Consensus       142 ~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~  208 (251)
                      ..+..               +.+++.+|++||+|+++|+++++.|+.+.|  |+|++|+||++.|+.
T Consensus       161 ~~~~~---------------~~~~~~~Y~asK~a~~~~~~~la~e~~~~g--i~v~~v~PG~~~~~~  210 (267)
T TIGR02685       161 AMTDQ---------------PLLGFTMYTMAKHALEGLTRSAALELAPLQ--IRVNGVAPGLSLLPD  210 (267)
T ss_pred             hhccC---------------CCcccchhHHHHHHHHHHHHHHHHHHhhhC--eEEEEEecCCccCcc
Confidence            76654               677888999999999999999999999999  999999999998763

Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family.

>PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=7.8e-31  Score=217.13  Aligned_cols=187  Identities=29%  Similarity=0.351  Sum_probs=166.0

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      |+++||||++|||++++++|+++|++|++++|+..+.++..+++...  +.++.++.+|+++++++.++++++.+.++++
T Consensus         8 ~~vlVtG~sg~iG~~l~~~L~~~G~~Vi~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   85 (239)
T PRK07666          8 KNALITGAGRGIGRAVAIALAKEGVNVGLLARTEENLKAVAEEVEAY--GVKVVIATADVSDYEEVTAAIEQLKNELGSI   85 (239)
T ss_pred             CEEEEEcCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHh--CCeEEEEECCCCCHHHHHHHHHHHHHHcCCc
Confidence            47999999999999999999999999999999988877777766433  4578899999999999999999999889999


Q ss_pred             eEEEEcCCCCC--CCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccccCC
Q 025509           81 NILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKIN  158 (251)
Q Consensus        81 d~lv~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~  158 (251)
                      |++|||+|...  +..+.++++|++.+++|+.+++.+++++.+++.++     ..+++|++||..+..            
T Consensus        86 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-----~~~~iv~~ss~~~~~------------  148 (239)
T PRK07666         86 DILINNAGISKFGKFLELDPAEWEKIIQVNLMGVYYATRAVLPSMIER-----QSGDIINISSTAGQK------------  148 (239)
T ss_pred             cEEEEcCccccCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhC-----CCcEEEEEcchhhcc------------
Confidence            99999999653  34567888999999999999999999999999875     468999999987765            


Q ss_pred             CCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccC
Q 025509          159 DPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  211 (251)
Q Consensus       159 ~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  211 (251)
                         +.++...|+.+|+++..++++++.|+.+.|  |+++.|+||++.|++...
T Consensus       149 ---~~~~~~~Y~~sK~a~~~~~~~~a~e~~~~g--i~v~~v~pg~v~t~~~~~  196 (239)
T PRK07666        149 ---GAAVTSAYSASKFGVLGLTESLMQEVRKHN--IRVTALTPSTVATDMAVD  196 (239)
T ss_pred             ---CCCCCcchHHHHHHHHHHHHHHHHHhhccC--cEEEEEecCcccCcchhh
Confidence               566777899999999999999999999988  999999999999998654

>PRK05884 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.2e-31  Score=217.64  Aligned_cols=171  Identities=19%  Similarity=0.148  Sum_probs=145.4

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      |+++||||++|||+++++.|+++|++|++++|+.+++++..+++       .+.++++|+++.++++++++++.+   ++
T Consensus         1 m~vlItGas~giG~~ia~~l~~~g~~v~~~~r~~~~~~~~~~~~-------~~~~~~~D~~~~~~v~~~~~~~~~---~i   70 (223)
T PRK05884          1 VEVLVTGGDTDLGRTIAEGFRNDGHKVTLVGARRDDLEVAAKEL-------DVDAIVCDNTDPASLEEARGLFPH---HL   70 (223)
T ss_pred             CeEEEEeCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhc-------cCcEEecCCCCHHHHHHHHHHHhh---cC
Confidence            47999999999999999999999999999999987766655433       356789999999999999887642   69


Q ss_pred             eEEEEcCCCCC----C----CCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCc
Q 025509           81 NILINNAGIMG----T----PFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGI  152 (251)
Q Consensus        81 d~lv~~ag~~~----~----~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~  152 (251)
                      |++|||||...    +    ..+ +.++|++++++|+.+++.++++++|.|++       .|+||++||.+         
T Consensus        71 d~lv~~ag~~~~~~~~~~~~~~~-~~~~~~~~~~~N~~~~~~~~~~~~~~~~~-------~g~Iv~isS~~---------  133 (223)
T PRK05884         71 DTIVNVPAPSWDAGDPRTYSLAD-TANAWRNALDATVLSAVLTVQSVGDHLRS-------GGSIISVVPEN---------  133 (223)
T ss_pred             cEEEECCCccccCCCCcccchhc-CHHHHHHHHHHHHHHHHHHHHHHHHHhhc-------CCeEEEEecCC---------
Confidence            99999998421    1    112 46889999999999999999999999964       47999999853         


Q ss_pred             ccccCCCCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCccc
Q 025509          153 RFDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIR  210 (251)
Q Consensus       153 ~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~  210 (251)
                                .+....|+++|+|+.+|+++++.|+.++|  |+||+|+||+++|++.+
T Consensus       134 ----------~~~~~~Y~asKaal~~~~~~la~e~~~~g--I~v~~v~PG~v~t~~~~  179 (223)
T PRK05884        134 ----------PPAGSAEAAIKAALSNWTAGQAAVFGTRG--ITINAVACGRSVQPGYD  179 (223)
T ss_pred             ----------CCCccccHHHHHHHHHHHHHHHHHhhhcC--eEEEEEecCccCchhhh
Confidence                      12446899999999999999999999999  99999999999999754

>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=1.2e-30  Score=217.23  Aligned_cols=187  Identities=29%  Similarity=0.361  Sum_probs=165.6

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      |++|||||+++||.+++++|+++|++|++++|+..+.++....+..   +..+.++.+|+++.++++++++++.++++++
T Consensus         6 ~~vlItGasg~iG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   82 (251)
T PRK07231          6 KVAIVTGASSGIGEGIARRFAAEGARVVVTDRNEEAAERVAAEILA---GGRAIAVAADVSDEADVEAAVAAALERFGSV   82 (251)
T ss_pred             cEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhc---CCeEEEEECCCCCHHHHHHHHHHHHHHhCCC
Confidence            5799999999999999999999999999999998877776665543   3568899999999999999999998888999


Q ss_pred             eEEEEcCCCCC---CCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccccC
Q 025509           81 NILINNAGIMG---TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKI  157 (251)
Q Consensus        81 d~lv~~ag~~~---~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~  157 (251)
                      |+||||+|...   +..+.+.+++++.+++|+.+++.+++.+++++.++     ..++||++||..+..           
T Consensus        83 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-----~~~~iv~~sS~~~~~-----------  146 (251)
T PRK07231         83 DILVNNAGTTHRNGPLLDVDEAEFDRIFAVNVKSPYLWTQAAVPAMRGE-----GGGAIVNVASTAGLR-----------  146 (251)
T ss_pred             CEEEECCCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhc-----CCcEEEEEcChhhcC-----------
Confidence            99999999743   24467889999999999999999999999999864     468999999987765           


Q ss_pred             CCCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCC
Q 025509          158 NDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRHN  212 (251)
Q Consensus       158 ~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~~  212 (251)
                          +.++...|+.+|++++.+++.++.++.+.|  |++++++||++.|++....
T Consensus       147 ----~~~~~~~y~~sk~~~~~~~~~~a~~~~~~~--i~v~~i~pg~~~t~~~~~~  195 (251)
T PRK07231        147 ----PRPGLGWYNASKGAVITLTKALAAELGPDK--IRVNAVAPVVVETGLLEAF  195 (251)
T ss_pred             ----CCCCchHHHHHHHHHHHHHHHHHHHhhhhC--eEEEEEEECccCCCcchhh
Confidence                667788999999999999999999999888  9999999999999986643

>PRK12744 short chain dehydrogenase; Provisional

Probab=100.00  E-value=5e-31  Score=220.69  Aligned_cols=184  Identities=21%  Similarity=0.266  Sum_probs=152.2

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCc----hhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhc
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDI----AAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQ   76 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~----~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~   76 (251)
                      |++|||||++|||+++|+.|+++|++|++++++.    +..++..+++...  +.++.++++|++++++++++++++.+.
T Consensus         9 k~vlItGa~~gIG~~~a~~l~~~G~~vv~i~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~   86 (257)
T PRK12744          9 KVVLIAGGAKNLGGLIARDLAAQGAKAVAIHYNSAASKADAEETVAAVKAA--GAKAVAFQADLTTAAAVEKLFDDAKAA   86 (257)
T ss_pred             cEEEEECCCchHHHHHHHHHHHCCCcEEEEecCCccchHHHHHHHHHHHHh--CCcEEEEecCcCCHHHHHHHHHHHHHh
Confidence            5799999999999999999999999977665432    2344444444332  456888999999999999999999988


Q ss_pred             CCCeeEEEEcCCCCC--CCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEE-cCccccccccCCcc
Q 025509           77 HHQLNILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINV-SSEGHRLAYHEGIR  153 (251)
Q Consensus        77 ~g~id~lv~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~v-sS~~~~~~~~~~~~  153 (251)
                      ++++|++|||||...  +..+.+.+++++.+++|+.+++.++++++|++.+       .++++++ ||..+.        
T Consensus        87 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~-------~~~iv~~~ss~~~~--------  151 (257)
T PRK12744         87 FGRPDIAINTVGKVLKKPIVEISEAEYDEMFAVNSKSAFFFIKEAGRHLND-------NGKIVTLVTSLLGA--------  151 (257)
T ss_pred             hCCCCEEEECCcccCCCCcccCCHHHHHHHHhhhhhHHHHHHHHHHHhhcc-------CCCEEEEecchhcc--------
Confidence            899999999999753  3556788899999999999999999999999864       3577766 444332        


Q ss_pred             cccCCCCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccC
Q 025509          154 FDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  211 (251)
Q Consensus       154 ~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  211 (251)
                              +.+.+..|++||+|+++|+++++.|+.++|  |+|++|+||++.|++..+
T Consensus       152 --------~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~--i~v~~v~pg~v~t~~~~~  199 (257)
T PRK12744        152 --------FTPFYSAYAGSKAPVEHFTRAASKEFGARG--ISVTAVGPGPMDTPFFYP  199 (257)
T ss_pred             --------cCCCcccchhhHHHHHHHHHHHHHHhCcCc--eEEEEEecCccccchhcc
Confidence                    345677999999999999999999999988  999999999999998654

>PRK12748 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=6.5e-31  Score=219.89  Aligned_cols=186  Identities=28%  Similarity=0.324  Sum_probs=158.2

Q ss_pred             CEEEEECCCC--hhHHHHHHHHHHcCCEEEEEecCc-----------hhHHHHHHHHHhhCCCCceEEEEecCCCHHHHH
Q 025509            1 MDIVITGATS--GIGTETARVLALRGVHVVMGVRDI-----------AAGKDVKETIVKEIPSAKVDAMELDLSSLASVR   67 (251)
Q Consensus         1 k~vlItG~s~--gIG~a~a~~l~~~G~~Vi~~~r~~-----------~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~   67 (251)
                      |++|||||++  |||.++|++|+++|++|++++|++           .......+.+...  +.++.++.+|+++.+++.
T Consensus         6 k~vlItGas~~~giG~~la~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~   83 (256)
T PRK12748          6 KIALVTGASRLNGIGAAVCRRLAAKGIDIFFTYWSPYDKTMPWGMHDKEPVLLKEEIESY--GVRCEHMEIDLSQPYAPN   83 (256)
T ss_pred             cEEEEeCCCCCCCHHHHHHHHHHHcCCcEEEEcCCccccccccccchhhHHHHHHHHHhc--CCeEEEEECCCCCHHHHH
Confidence            5799999994  999999999999999999999872           2222233333222  456899999999999999


Q ss_pred             HHHHHHHhcCCCeeEEEEcCCCCC--CCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCcccc
Q 025509           68 NFASEYNIQHHQLNILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHR  145 (251)
Q Consensus        68 ~~~~~~~~~~g~id~lv~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~  145 (251)
                      .+++++.+.++++|+||||||...  +..+.++++++..+++|+.+++.+++++++.|.++     ..++||++||..+.
T Consensus        84 ~~~~~~~~~~g~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-----~~~~iv~~ss~~~~  158 (256)
T PRK12748         84 RVFYAVSERLGDPSILINNAAYSTHTRLEELTAEQLDKHYAVNVRATMLLSSAFAKQYDGK-----AGGRIINLTSGQSL  158 (256)
T ss_pred             HHHHHHHHhCCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhhc-----CCeEEEEECCcccc
Confidence            999999999999999999999753  35567888999999999999999999999998764     46899999997665


Q ss_pred             ccccCCcccccCCCCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCccc
Q 025509          146 LAYHEGIRFDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIR  210 (251)
Q Consensus       146 ~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~  210 (251)
                      .               +.+++..|+++|+|+++++++++.|+.+.|  |+|+.|+||+++|++..
T Consensus       159 ~---------------~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~--i~v~~i~Pg~~~t~~~~  206 (256)
T PRK12748        159 G---------------PMPDELAYAATKGAIEAFTKSLAPELAEKG--ITVNAVNPGPTDTGWIT  206 (256)
T ss_pred             C---------------CCCCchHHHHHHHHHHHHHHHHHHHHHHhC--eEEEEEEeCcccCCCCC
Confidence            4               566778999999999999999999999888  99999999999999765

>PRK06138 short chain dehydrogenase; Provisional

Probab=99.98  E-value=6.8e-31  Score=218.83  Aligned_cols=186  Identities=30%  Similarity=0.381  Sum_probs=164.8

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      |++|||||+++||+++|++|+++|++|++++|+.+..++..+.+.   .+..+.++++|++|+++++++++++.++++++
T Consensus         6 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~---~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~i   82 (252)
T PRK06138          6 RVAIVTGAGSGIGRATAKLFAREGARVVVADRDAEAAERVAAAIA---AGGRAFARQGDVGSAEAVEALVDFVAARWGRL   82 (252)
T ss_pred             cEEEEeCCCchHHHHHHHHHHHCCCeEEEecCCHHHHHHHHHHHh---cCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence            579999999999999999999999999999999877776666554   25668999999999999999999999999999


Q ss_pred             eEEEEcCCCCCC--CCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccccCC
Q 025509           81 NILINNAGIMGT--PFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKIN  158 (251)
Q Consensus        81 d~lv~~ag~~~~--~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~  158 (251)
                      |+||||+|....  ..+.+.+++++.+++|+.+++.+++.+++.++++     ..++|+++||..+..            
T Consensus        83 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-----~~~~ii~~sS~~~~~------------  145 (252)
T PRK06138         83 DVLVNNAGFGCGGTVVTTDEADWDAVMRVNVGGVFLWAKYAIPIMQRQ-----GGGSIVNTASQLALA------------  145 (252)
T ss_pred             CEEEECCCCCCCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHHHHhc-----CCeEEEEECChhhcc------------
Confidence            999999997533  4566788999999999999999999999999875     467999999987665            


Q ss_pred             CCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccC
Q 025509          159 DPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  211 (251)
Q Consensus       159 ~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  211 (251)
                         +.++...|+.+|++++.++++++.++.++|  |++++|+||++.|++...
T Consensus       146 ---~~~~~~~Y~~sK~a~~~~~~~l~~~~~~~~--i~v~~v~pg~~~t~~~~~  193 (252)
T PRK06138        146 ---GGRGRAAYVASKGAIASLTRAMALDHATDG--IRVNAVAPGTIDTPYFRR  193 (252)
T ss_pred             ---CCCCccHHHHHHHHHHHHHHHHHHHHHhcC--eEEEEEEECCccCcchhh
Confidence               556778999999999999999999999888  999999999999998654

>KOG1014 consensus 17 beta-hydroxysteroid dehydrogenase type 3, HSD17B3 [Lipid transport and metabolism]

Probab=99.98  E-value=7.9e-32  Score=222.88  Aligned_cols=186  Identities=27%  Similarity=0.321  Sum_probs=166.9

Q ss_pred             EEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHH-HHHHHHHHHhcCCCee
Q 025509            3 IVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLAS-VRNFASEYNIQHHQLN   81 (251)
Q Consensus         3 vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~-i~~~~~~~~~~~g~id   81 (251)
                      ++||||+.|||++.|++||++|++|++++|++++++.+.+++.+.++ ..+.++.+|+++.++ .+++.+.+.+  .++-
T Consensus        52 AVVTGaTDGIGKayA~eLAkrG~nvvLIsRt~~KL~~v~kEI~~~~~-vev~~i~~Dft~~~~~ye~i~~~l~~--~~Vg  128 (312)
T KOG1014|consen   52 AVVTGATDGIGKAYARELAKRGFNVVLISRTQEKLEAVAKEIEEKYK-VEVRIIAIDFTKGDEVYEKLLEKLAG--LDVG  128 (312)
T ss_pred             EEEECCCCcchHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHHhC-cEEEEEEEecCCCchhHHHHHHHhcC--CceE
Confidence            68999999999999999999999999999999999999999999885 889999999998776 4444444432  3799


Q ss_pred             EEEEcCCCCC--C--CCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccccC
Q 025509           82 ILINNAGIMG--T--PFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKI  157 (251)
Q Consensus        82 ~lv~~ag~~~--~--~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~  157 (251)
                      +||||+|...  |  +.+.+.+.+++.+.+|+.+...+++.++|.|.++     +.|-|+++||.++..           
T Consensus       129 ILVNNvG~~~~~P~~f~~~~~~~~~~ii~vN~~~~~~~t~~ilp~M~~r-----~~G~IvnigS~ag~~-----------  192 (312)
T KOG1014|consen  129 ILVNNVGMSYDYPESFLKYPEGELQNIINVNILSVTLLTQLILPGMVER-----KKGIIVNIGSFAGLI-----------  192 (312)
T ss_pred             EEEecccccCCCcHHHHhCchhhhhheeEEecchHHHHHHHhhhhhhcC-----CCceEEEeccccccc-----------
Confidence            9999999764  3  4566776889999999999999999999999986     679999999999887           


Q ss_pred             CCCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCCc
Q 025509          158 NDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRHNS  213 (251)
Q Consensus       158 ~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~~~  213 (251)
                          |.|.++.|+++|+.++.|+++|+.|+..+|  |.|.+|.|.+|.|+|.....
T Consensus       193 ----p~p~~s~ysasK~~v~~~S~~L~~Ey~~~g--I~Vq~v~p~~VaTkm~~~~~  242 (312)
T KOG1014|consen  193 ----PTPLLSVYSASKAFVDFFSRCLQKEYESKG--IFVQSVIPYLVATKMAKYRK  242 (312)
T ss_pred             ----cChhHHHHHHHHHHHHHHHHHHHHHHHhcC--eEEEEeehhheeccccccCC
Confidence                899999999999999999999999999999  99999999999999987654

>PRK12935 acetoacetyl-CoA reductase; Provisional

Probab=99.98  E-value=1e-30  Score=217.39  Aligned_cols=188  Identities=28%  Similarity=0.365  Sum_probs=161.7

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEec-CchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCC
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVR-DIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQ   79 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r-~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~   79 (251)
                      |++|||||++|||.++|++|+++|++|+++.+ +++..++..+.+.+.  +.++.++++|+++++++.++++++.+.+++
T Consensus         7 ~~~lItG~s~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   84 (247)
T PRK12935          7 KVAIVTGGAKGIGKAITVALAQEGAKVVINYNSSKEAAENLVNELGKE--GHDVYAVQADVSKVEDANRLVEEAVNHFGK   84 (247)
T ss_pred             CEEEEECCCCHHHHHHHHHHHHcCCEEEEEcCCcHHHHHHHHHHHHhc--CCeEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            57999999999999999999999999987654 455555555555432  457899999999999999999999999999


Q ss_pred             eeEEEEcCCCCCC--CCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccccC
Q 025509           80 LNILINNAGIMGT--PFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKI  157 (251)
Q Consensus        80 id~lv~~ag~~~~--~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~  157 (251)
                      +|+||||||....  ..+.+.+++++.+++|+.+++.++++++|.+.++     ..+++|++||..+..           
T Consensus        85 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-----~~~~iv~~sS~~~~~-----------  148 (247)
T PRK12935         85 VDILVNNAGITRDRTFKKLNREDWERVIDVNLSSVFNTTSAVLPYITEA-----EEGRIISISSIIGQA-----------  148 (247)
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-----CCcEEEEEcchhhcC-----------
Confidence            9999999997543  4456778999999999999999999999999865     457999999987665           


Q ss_pred             CCCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCC
Q 025509          158 NDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRHN  212 (251)
Q Consensus       158 ~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~~  212 (251)
                          +.+++..|+++|+|+++++++++.++.+.|  |+++.|+||+++|++....
T Consensus       149 ----~~~~~~~Y~~sK~a~~~~~~~l~~~~~~~~--i~v~~v~pg~v~t~~~~~~  197 (247)
T PRK12935        149 ----GGFGQTNYSAAKAGMLGFTKSLALELAKTN--VTVNAICPGFIDTEMVAEV  197 (247)
T ss_pred             ----CCCCCcchHHHHHHHHHHHHHHHHHHHHcC--cEEEEEEeCCCcChhhhhc
Confidence                456778999999999999999999998888  9999999999999986643

>PRK07102 short chain dehydrogenase; Provisional

Probab=99.98  E-value=8.9e-31  Score=217.38  Aligned_cols=186  Identities=25%  Similarity=0.327  Sum_probs=161.8

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      |+++||||++|||.+++++|+++|++|++++|++++.++..+.+... ++.++.++++|++++++++++++++.+   .+
T Consensus         2 ~~vlItGas~giG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~~~~~~~~~~~~~~~---~~   77 (243)
T PRK07102          2 KKILIIGATSDIARACARRYAAAGARLYLAARDVERLERLADDLRAR-GAVAVSTHELDILDTASHAAFLDSLPA---LP   77 (243)
T ss_pred             cEEEEEcCCcHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHHh-cCCeEEEEecCCCChHHHHHHHHHHhh---cC
Confidence            68999999999999999999999999999999988877777666543 245789999999999999999998754   46


Q ss_pred             eEEEEcCCCCCC--CCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccccCC
Q 025509           81 NILINNAGIMGT--PFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKIN  158 (251)
Q Consensus        81 d~lv~~ag~~~~--~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~  158 (251)
                      |++|||+|....  ..+.+.+++.+.+++|+.+++.+++++.|+|.++     +.+++|++||..+..            
T Consensus        78 d~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-----~~~~iv~~sS~~~~~------------  140 (243)
T PRK07102         78 DIVLIAVGTLGDQAACEADPALALREFRTNFEGPIALLTLLANRFEAR-----GSGTIVGISSVAGDR------------  140 (243)
T ss_pred             CEEEECCcCCCCcccccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhC-----CCCEEEEEecccccC------------
Confidence            999999996532  4466788899999999999999999999999875     468999999987655            


Q ss_pred             CCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCC
Q 025509          159 DPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRHN  212 (251)
Q Consensus       159 ~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~~  212 (251)
                         +.+....|+++|+++++++++++.|+.+.|  |++++|+||+++|++....
T Consensus       141 ---~~~~~~~Y~~sK~a~~~~~~~l~~el~~~g--i~v~~v~pg~v~t~~~~~~  189 (243)
T PRK07102        141 ---GRASNYVYGSAKAALTAFLSGLRNRLFKSG--VHVLTVKPGFVRTPMTAGL  189 (243)
T ss_pred             ---CCCCCcccHHHHHHHHHHHHHHHHHhhccC--cEEEEEecCcccChhhhcc
Confidence               556677899999999999999999999989  9999999999999986653

>PRK13394 3-hydroxybutyrate dehydrogenase; Provisional

Probab=99.98  E-value=9.9e-31  Score=219.08  Aligned_cols=187  Identities=26%  Similarity=0.260  Sum_probs=164.4

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      |++|||||+++||++++++|+++|++|++++|++...++..+.+.+.  +..+.++++|+++.++++++++++...++++
T Consensus         8 ~~vlItGasg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~   85 (262)
T PRK13394          8 KTAVVTGAASGIGKEIALELARAGAAVAIADLNQDGANAVADEINKA--GGKAIGVAMDVTNEDAVNAGIDKVAERFGSV   85 (262)
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHhc--CceEEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence            57999999999999999999999999999999988888877777543  4568889999999999999999998888999


Q ss_pred             eEEEEcCCCCC--CCCcCCchhhHHHHHHHHHHHHHHHHHHHHHH-HHhhccCCCCceEEEEcCccccccccCCcccccC
Q 025509           81 NILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTM-KKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKI  157 (251)
Q Consensus        81 d~lv~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~  157 (251)
                      |+||||||...  +..+.+.++++..+++|+.+++.+++.+++.+ ++.     +.++||++||..+..           
T Consensus        86 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~-----~~~~iv~~ss~~~~~-----------  149 (262)
T PRK13394         86 DILVSNAGIQIVNPIENYSFADWKKMQAIHVDGAFLTTKAALKHMYKDD-----RGGVVIYMGSVHSHE-----------  149 (262)
T ss_pred             CEEEECCccCCCCchhhCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhhc-----CCcEEEEEcchhhcC-----------
Confidence            99999999753  24456788899999999999999999999999 543     468999999976554           


Q ss_pred             CCCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccC
Q 025509          158 NDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  211 (251)
Q Consensus       158 ~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  211 (251)
                          +.+....|+++|+++++++++++.++.+.|  |+++.|+||+++|++...
T Consensus       150 ----~~~~~~~y~~sk~a~~~~~~~la~~~~~~~--i~v~~v~pg~v~~~~~~~  197 (262)
T PRK13394        150 ----ASPLKSAYVTAKHGLLGLARVLAKEGAKHN--VRSHVVCPGFVRTPLVDK  197 (262)
T ss_pred             ----CCCCCcccHHHHHHHHHHHHHHHHHhhhcC--eEEEEEeeCcccchhhhh
Confidence                456677999999999999999999998888  999999999999998653

>PRK05875 short chain dehydrogenase; Provisional

Probab=99.98  E-value=1.4e-30  Score=220.19  Aligned_cols=189  Identities=21%  Similarity=0.192  Sum_probs=165.3

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      |++|||||++|||.+++++|+++|++|++++|+.+..++..+++.....+.++.++++|+++++++.++++++.+.++++
T Consensus         8 k~vlItGasg~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~   87 (276)
T PRK05875          8 RTYLVTGGGSGIGKGVAAGLVAAGAAVMIVGRNPDKLAAAAEEIEALKGAGAVRYEPADVTDEDQVARAVDAATAWHGRL   87 (276)
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhccCCCceEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence            58999999999999999999999999999999987777776666543223568889999999999999999999889999


Q ss_pred             eEEEEcCCCCC---CCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccccC
Q 025509           81 NILINNAGIMG---TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKI  157 (251)
Q Consensus        81 d~lv~~ag~~~---~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~  157 (251)
                      |++|||||...   +..+.+.++|+..+++|+.+++.+++++.+.+.++     +.++|+++||..+..           
T Consensus        88 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-----~~g~iv~~sS~~~~~-----------  151 (276)
T PRK05875         88 HGVVHCAGGSETIGPITQIDSDAWRRTVDLNVNGTMYVLKHAARELVRG-----GGGSFVGISSIAASN-----------  151 (276)
T ss_pred             CEEEECCCcccCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-----CCcEEEEEechhhcC-----------
Confidence            99999999642   34567788899999999999999999999999764     467999999987654           


Q ss_pred             CCCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccC
Q 025509          158 NDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  211 (251)
Q Consensus       158 ~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  211 (251)
                          +.+...+|+.+|++++.++++++.++...+  |++++|+||+++|++...
T Consensus       152 ----~~~~~~~Y~~sK~a~~~~~~~~~~~~~~~~--i~v~~i~Pg~v~t~~~~~  199 (276)
T PRK05875        152 ----THRWFGAYGVTKSAVDHLMKLAADELGPSW--VRVNSIRPGLIRTDLVAP  199 (276)
T ss_pred             ----CCCCCcchHHHHHHHHHHHHHHHHHhcccC--eEEEEEecCccCCccccc
Confidence                556678999999999999999999999988  999999999999998754

>PRK09072 short chain dehydrogenase; Provisional

Probab=99.98  E-value=1.2e-30  Score=219.22  Aligned_cols=185  Identities=25%  Similarity=0.319  Sum_probs=163.0

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      +++|||||++|||.+++++|+++|++|++++|+.+.+++...++ + . +.++.++.+|++|.++++++++.+.+ ++++
T Consensus         6 ~~vlItG~s~~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~-~-~-~~~~~~~~~D~~d~~~~~~~~~~~~~-~~~i   81 (263)
T PRK09072          6 KRVLLTGASGGIGQALAEALAAAGARLLLVGRNAEKLEALAARL-P-Y-PGRHRWVVADLTSEAGREAVLARARE-MGGI   81 (263)
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHH-h-c-CCceEEEEccCCCHHHHHHHHHHHHh-cCCC
Confidence            57999999999999999999999999999999988877776666 2 2 45788999999999999999998876 7899


Q ss_pred             eEEEEcCCCCC--CCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccccCC
Q 025509           81 NILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKIN  158 (251)
Q Consensus        81 d~lv~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~  158 (251)
                      |++|||||...  +..+.+.+++++.+++|+.|++.+++.++|++.++     +.+++|++||..+..            
T Consensus        82 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~-----~~~~iv~isS~~~~~------------  144 (263)
T PRK09072         82 NVLINNAGVNHFALLEDQDPEAIERLLALNLTAPMQLTRALLPLLRAQ-----PSAMVVNVGSTFGSI------------  144 (263)
T ss_pred             CEEEECCCCCCccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhc-----CCCEEEEecChhhCc------------
Confidence            99999999753  35567788999999999999999999999999875     458999999987765            


Q ss_pred             CCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccC
Q 025509          159 DPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  211 (251)
Q Consensus       159 ~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  211 (251)
                         +.++...|+.+|+++.+++++++.++.+.|  |+|++|+||+++|++...
T Consensus       145 ---~~~~~~~Y~~sK~a~~~~~~~l~~~~~~~~--i~v~~v~Pg~~~t~~~~~  192 (263)
T PRK09072        145 ---GYPGYASYCASKFALRGFSEALRRELADTG--VRVLYLAPRATRTAMNSE  192 (263)
T ss_pred             ---CCCCccHHHHHHHHHHHHHHHHHHHhcccC--cEEEEEecCcccccchhh
Confidence               566778999999999999999999999888  999999999999998653

>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed

Probab=99.98  E-value=1.7e-30  Score=215.50  Aligned_cols=184  Identities=27%  Similarity=0.375  Sum_probs=161.5

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      |++|||||++|||++++++|+++|+.|++.+|+.+++++....+     +..+.++.+|+++.++++++++++.+.++++
T Consensus         7 ~~vlItGa~g~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   81 (245)
T PRK12936          7 RKALVTGASGGIGEEIARLLHAQGAIVGLHGTRVEKLEALAAEL-----GERVKIFPANLSDRDEVKALGQKAEADLEGV   81 (245)
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHh-----CCceEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            57999999999999999999999999999999877766654433     4568889999999999999999999889999


Q ss_pred             eEEEEcCCCCCC--CCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccccCC
Q 025509           81 NILINNAGIMGT--PFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKIN  158 (251)
Q Consensus        81 d~lv~~ag~~~~--~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~  158 (251)
                      |++|||||...+  ..+.+.++|++.+++|+.+++.+++++.+.+.++     +.++||++||..+..            
T Consensus        82 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-----~~~~iv~~sS~~~~~------------  144 (245)
T PRK12936         82 DILVNNAGITKDGLFVRMSDEDWDSVLEVNLTATFRLTRELTHPMMRR-----RYGRIINITSVVGVT------------  144 (245)
T ss_pred             CEEEECCCCCCCCccccCCHHHHHHHHhhccHHHHHHHHHHHHHHHHh-----CCCEEEEECCHHhCc------------
Confidence            999999997532  4566788999999999999999999999988764     468999999987765            


Q ss_pred             CCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccC
Q 025509          159 DPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  211 (251)
Q Consensus       159 ~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  211 (251)
                         +.+....|+.+|+++.++++.++.++.+.|  +++++++||+++|++...
T Consensus       145 ---~~~~~~~Y~~sk~a~~~~~~~la~~~~~~~--i~v~~i~pg~~~t~~~~~  192 (245)
T PRK12936        145 ---GNPGQANYCASKAGMIGFSKSLAQEIATRN--VTVNCVAPGFIESAMTGK  192 (245)
T ss_pred             ---CCCCCcchHHHHHHHHHHHHHHHHHhhHhC--eEEEEEEECcCcCchhcc
Confidence               556778999999999999999999999888  999999999999998654

>TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase

Probab=99.98  E-value=3.2e-30  Score=214.52  Aligned_cols=187  Identities=26%  Similarity=0.354  Sum_probs=165.2

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      |++|||||+++||++++++|+++|++|++++|+.+..++..+.+.+.  +.++.++.+|+++.++++++++++.+.++++
T Consensus         4 ~~ilItGas~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~   81 (250)
T TIGR03206         4 KTAIVTGGGGGIGGATCRRFAEEGAKVAVFDLNREAAEKVAADIRAK--GGNAQAFACDITDRDSVDTAVAAAEQALGPV   81 (250)
T ss_pred             CEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhc--CCcEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence            57999999999999999999999999999999988877776666543  4568899999999999999999998888999


Q ss_pred             eEEEEcCCCCC--CCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccccCC
Q 025509           81 NILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKIN  158 (251)
Q Consensus        81 d~lv~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~  158 (251)
                      |++|||+|...  +..+.+.+++++.+++|+.+++.+++++.++|.+.     +.+++|++||..+..            
T Consensus        82 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-----~~~~ii~iss~~~~~------------  144 (250)
T TIGR03206        82 DVLVNNAGWDKFGPFTKTEPPLWERLIAINLTGALHMHHAVLPGMVER-----GAGRIVNIASDAARV------------  144 (250)
T ss_pred             CEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-----CCeEEEEECchhhcc------------
Confidence            99999999643  34556778899999999999999999999999774     467999999987765            


Q ss_pred             CCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccC
Q 025509          159 DPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  211 (251)
Q Consensus       159 ~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  211 (251)
                         +.++...|+.+|+|++.++++++.++.+.|  |+++.|+||+++|++...
T Consensus       145 ---~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~--i~v~~v~pg~~~~~~~~~  192 (250)
T TIGR03206       145 ---GSSGEAVYAACKGGLVAFSKTMAREHARHG--ITVNVVCPGPTDTALLDD  192 (250)
T ss_pred             ---CCCCCchHHHHHHHHHHHHHHHHHHHhHhC--cEEEEEecCcccchhHHh
Confidence               556778999999999999999999998888  999999999999998654

Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate.

>PRK06057 short chain dehydrogenase; Provisional

Probab=99.98  E-value=1.3e-30  Score=217.95  Aligned_cols=183  Identities=28%  Similarity=0.332  Sum_probs=157.2

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      |++|||||++|||.+++++|+++|++|++++|+....++..+.+     +  ..++++|+++.++++++++++.+.++++
T Consensus         8 ~~vlItGasggIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~-----~--~~~~~~D~~~~~~~~~~~~~~~~~~~~i   80 (255)
T PRK06057          8 RVAVITGGGSGIGLATARRLAAEGATVVVGDIDPEAGKAAADEV-----G--GLFVPTDVTDEDAVNALFDTAAETYGSV   80 (255)
T ss_pred             CEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHc-----C--CcEEEeeCCCHHHHHHHHHHHHHHcCCC
Confidence            58999999999999999999999999999999877665554433     1  2578999999999999999998888999


Q ss_pred             eEEEEcCCCCC----CCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCccccc
Q 025509           81 NILINNAGIMG----TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDK  156 (251)
Q Consensus        81 d~lv~~ag~~~----~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~  156 (251)
                      |++|||||...    ++.+.+.++|+..+++|+.+++.+++.++|+++++     ..++||++||..+..+         
T Consensus        81 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~-----~~g~iv~~sS~~~~~g---------  146 (255)
T PRK06057         81 DIAFNNAGISPPEDDSILNTGLDAWQRVQDVNLTSVYLCCKAALPHMVRQ-----GKGSIINTASFVAVMG---------  146 (255)
T ss_pred             CEEEECCCcCCCCCCCcccCCHHHHHHHHHHhcHHHHHHHHHHHHHHHHh-----CCcEEEEEcchhhccC---------
Confidence            99999999653    23456778899999999999999999999999875     4689999999766541         


Q ss_pred             CCCCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccC
Q 025509          157 INDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  211 (251)
Q Consensus       157 ~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  211 (251)
                           +.+++..|+.+|++++.++++++.++.+.|  |+|++|+||+++|++...
T Consensus       147 -----~~~~~~~Y~~sKaal~~~~~~l~~~~~~~g--i~v~~i~pg~v~t~~~~~  194 (255)
T PRK06057        147 -----SATSQISYTASKGGVLAMSRELGVQFARQG--IRVNALCPGPVNTPLLQE  194 (255)
T ss_pred             -----CCCCCcchHHHHHHHHHHHHHHHHHHHhhC--cEEEEEeeCCcCCchhhh
Confidence                 123567899999999999999999999888  999999999999998764

>PRK06101 short chain dehydrogenase; Provisional

Probab=99.97  E-value=1e-30  Score=216.84  Aligned_cols=179  Identities=26%  Similarity=0.279  Sum_probs=153.2

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      ++++||||++|||++++++|+++|++|++++|+++++++..+.      ...+.++++|+++.++++++++++..   .+
T Consensus         2 ~~vlItGas~giG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~------~~~~~~~~~D~~~~~~~~~~~~~~~~---~~   72 (240)
T PRK06101          2 TAVLITGATSGIGKQLALDYAKQGWQVIACGRNQSVLDELHTQ------SANIFTLAFDVTDHPGTKAALSQLPF---IP   72 (240)
T ss_pred             cEEEEEcCCcHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHh------cCCCeEEEeeCCCHHHHHHHHHhccc---CC
Confidence            5799999999999999999999999999999987665554332      23578899999999999999987642   47


Q ss_pred             eEEEEcCCCCCC--CCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccccCC
Q 025509           81 NILINNAGIMGT--PFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKIN  158 (251)
Q Consensus        81 d~lv~~ag~~~~--~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~  158 (251)
                      |.+|+|||....  ..+.+.++|++++++|+.+++.++++++|+|.+       ++++|++||..+..            
T Consensus        73 d~~i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-------~~~iv~isS~~~~~------------  133 (240)
T PRK06101         73 ELWIFNAGDCEYMDDGKVDATLMARVFNVNVLGVANCIEGIQPHLSC-------GHRVVIVGSIASEL------------  133 (240)
T ss_pred             CEEEEcCcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhc-------CCeEEEEechhhcc------------
Confidence            999999986432  334678889999999999999999999999854       46899999987665            


Q ss_pred             CCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCC
Q 025509          159 DPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRHN  212 (251)
Q Consensus       159 ~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~~  212 (251)
                         +.+.+..|+++|+++++|+++++.|+.+.|  |++++|+||++.|++....
T Consensus       134 ---~~~~~~~Y~asK~a~~~~~~~l~~e~~~~g--i~v~~v~pg~i~t~~~~~~  182 (240)
T PRK06101        134 ---ALPRAEAYGASKAAVAYFARTLQLDLRPKG--IEVVTVFPGFVATPLTDKN  182 (240)
T ss_pred             ---CCCCCchhhHHHHHHHHHHHHHHHHHHhcC--ceEEEEeCCcCCCCCcCCC
Confidence               567788999999999999999999999988  9999999999999987643

>KOG1210 consensus Predicted 3-ketosphinganine reductase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.97  E-value=1.1e-30  Score=215.74  Aligned_cols=195  Identities=27%  Similarity=0.257  Sum_probs=177.7

Q ss_pred             EEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCee
Q 025509            2 DIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQLN   81 (251)
Q Consensus         2 ~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~id   81 (251)
                      .++|||||+|||+++|.++..+|++|.++.|+.+++++++..+.-...-.++.+..+|+++.+++..+++++....+++|
T Consensus        35 hi~itggS~glgl~la~e~~~~ga~Vti~ar~~~kl~~a~~~l~l~~~~~~v~~~S~d~~~Y~~v~~~~~~l~~~~~~~d  114 (331)
T KOG1210|consen   35 HILITGGSSGLGLALALECKREGADVTITARSGKKLLEAKAELELLTQVEDVSYKSVDVIDYDSVSKVIEELRDLEGPID  114 (331)
T ss_pred             eEEEecCcchhhHHHHHHHHHccCceEEEeccHHHHHHHHhhhhhhhccceeeEeccccccHHHHHHHHhhhhhccCCcc
Confidence            68999999999999999999999999999999999999999887654334488999999999999999999999999999


Q ss_pred             EEEEcCCCC--CCCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccccCCC
Q 025509           82 ILINNAGIM--GTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKIND  159 (251)
Q Consensus        82 ~lv~~ag~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~  159 (251)
                      .+|+|||..  +-+.+.+.++++..|++|+.++++++++.++.|+++.    +.|+|+++||.++..             
T Consensus       115 ~l~~cAG~~v~g~f~~~s~~~v~~~m~vNylgt~~v~~~~~~~mk~~~----~~g~I~~vsS~~a~~-------------  177 (331)
T KOG1210|consen  115 NLFCCAGVAVPGLFEDLSPEVVEKLMDVNYLGTVNVAKAAARAMKKRE----HLGRIILVSSQLAML-------------  177 (331)
T ss_pred             eEEEecCcccccccccCCHHHHHHHHHhhhhhhHHHHHHHHHHhhccc----cCcEEEEehhhhhhc-------------
Confidence            999999965  3377899999999999999999999999999999862    357999999999988             


Q ss_pred             CCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCCcchhh
Q 025509          160 PSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRHNSLFRS  217 (251)
Q Consensus       160 ~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~~~~~~~  217 (251)
                        +..++++|+++|+|+.+|+..+++|+.+.|  |+|....|+.+.||....++..++
T Consensus       178 --~i~GysaYs~sK~alrgLa~~l~qE~i~~~--v~Vt~~~P~~~~tpGfE~En~tkP  231 (331)
T KOG1210|consen  178 --GIYGYSAYSPSKFALRGLAEALRQELIKYG--VHVTLYYPPDTLTPGFERENKTKP  231 (331)
T ss_pred             --CcccccccccHHHHHHHHHHHHHHHHhhcc--eEEEEEcCCCCCCCccccccccCc
Confidence              899999999999999999999999999998  999999999999998887655444

>PRK12429 3-hydroxybutyrate dehydrogenase; Provisional

Probab=99.97  E-value=2.1e-30  Score=216.55  Aligned_cols=186  Identities=30%  Similarity=0.341  Sum_probs=166.2

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      |++|||||+++||+++|++|+++|++|++++|++++.++...++...  +.++.++.+|+++++++.++++++.+.++++
T Consensus         5 ~~vlItG~sg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~   82 (258)
T PRK12429          5 KVALVTGAASGIGLEIALALAKEGAKVVIADLNDEAAAAAAEALQKA--GGKAIGVAMDVTDEEAINAGIDYAVETFGGV   82 (258)
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhc--CCcEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence            57999999999999999999999999999999988887777666543  4578899999999999999999999888999


Q ss_pred             eEEEEcCCCCCC--CCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccccCC
Q 025509           81 NILINNAGIMGT--PFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKIN  158 (251)
Q Consensus        81 d~lv~~ag~~~~--~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~  158 (251)
                      |+||||||....  ..+.+.++++..+++|+.+++.+++.+++.++++     +.++||++||..+..            
T Consensus        83 d~vi~~a~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-----~~~~iv~iss~~~~~------------  145 (258)
T PRK12429         83 DILVNNAGIQHVAPIEDFPTEKWKKMIAIMLDGAFLTTKAALPIMKAQ-----GGGRIINMASVHGLV------------  145 (258)
T ss_pred             CEEEECCCCCCCCChhhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhc-----CCeEEEEEcchhhcc------------
Confidence            999999996532  4566788899999999999999999999999885     468999999987765            


Q ss_pred             CCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCccc
Q 025509          159 DPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIR  210 (251)
Q Consensus       159 ~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~  210 (251)
                         +.++...|+++|++++.+++.++.++.+.|  |+++.++||++.|++..
T Consensus       146 ---~~~~~~~y~~~k~a~~~~~~~l~~~~~~~~--i~v~~~~pg~v~~~~~~  192 (258)
T PRK12429        146 ---GSAGKAAYVSAKHGLIGLTKVVALEGATHG--VTVNAICPGYVDTPLVR  192 (258)
T ss_pred             ---CCCCcchhHHHHHHHHHHHHHHHHHhcccC--eEEEEEecCCCcchhhh
Confidence               667788999999999999999999999888  99999999999999865

>KOG1207 consensus Diacetyl reductase/L-xylulose reductase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.97  E-value=2.9e-32  Score=206.87  Aligned_cols=184  Identities=25%  Similarity=0.293  Sum_probs=162.2

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      ++|++||+..|||+++++.|++.|+.|+.++|++..+..+..+.     ..-+..+..|+++++.+.+.+.    ..+++
T Consensus         8 ~~vlvTgagaGIG~~~v~~La~aGA~ViAvaR~~a~L~sLV~e~-----p~~I~Pi~~Dls~wea~~~~l~----~v~pi   78 (245)
T KOG1207|consen    8 VIVLVTGAGAGIGKEIVLSLAKAGAQVIAVARNEANLLSLVKET-----PSLIIPIVGDLSAWEALFKLLV----PVFPI   78 (245)
T ss_pred             eEEEeecccccccHHHHHHHHhcCCEEEEEecCHHHHHHHHhhC-----CcceeeeEecccHHHHHHHhhc----ccCch
Confidence            47999999999999999999999999999999999888876654     3458889999999777776554    34699


Q ss_pred             eEEEEcCCCC--CCCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccccCC
Q 025509           81 NILINNAGIM--GTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKIN  158 (251)
Q Consensus        81 d~lv~~ag~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~  158 (251)
                      |.+|||||+.  .|+.+++.++++..|++|+.+.+.+.|...+.+..+.    -.|.||++||.++..            
T Consensus        79 dgLVNNAgvA~~~pf~eiT~q~fDr~F~VNvravi~v~Q~var~lv~R~----~~GaIVNvSSqas~R------------  142 (245)
T KOG1207|consen   79 DGLVNNAGVATNHPFGEITQQSFDRTFAVNVRAVILVAQLVARNLVDRQ----IKGAIVNVSSQASIR------------  142 (245)
T ss_pred             hhhhccchhhhcchHHHHhHHhhcceeeeeeeeeeeHHHHHHHhhhhcc----CCceEEEecchhccc------------
Confidence            9999999964  6788999999999999999999999999888888874    368899999987765            


Q ss_pred             CCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCCcc
Q 025509          159 DPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRHNSL  214 (251)
Q Consensus       159 ~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~~~~  214 (251)
                         +....+.|+++|+|+++++++||.|+++++  ||||+|.|-.|.|.|.+....
T Consensus       143 ---~~~nHtvYcatKaALDmlTk~lAlELGp~k--IRVNsVNPTVVmT~MG~dnWS  193 (245)
T KOG1207|consen  143 ---PLDNHTVYCATKAALDMLTKCLALELGPQK--IRVNSVNPTVVMTDMGRDNWS  193 (245)
T ss_pred             ---ccCCceEEeecHHHHHHHHHHHHHhhCcce--eEeeccCCeEEEecccccccC
Confidence               677788999999999999999999999999  999999999999999886543

>PRK08213 gluconate 5-dehydrogenase; Provisional

Probab=99.97  E-value=3.1e-30  Score=216.10  Aligned_cols=191  Identities=26%  Similarity=0.305  Sum_probs=162.3

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      |++|||||++|||.++|++|+++|++|++++|+.++++...+.+...  +.++.++.+|++|+++++++++++.+.++++
T Consensus        13 k~ilItGa~g~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~i~~~--~~~~~~~~~Dl~d~~~i~~~~~~~~~~~~~i   90 (259)
T PRK08213         13 KTALVTGGSRGLGLQIAEALGEAGARVVLSARKAEELEEAAAHLEAL--GIDALWIAADVADEADIERLAEETLERFGHV   90 (259)
T ss_pred             CEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhc--CCeEEEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence            57999999999999999999999999999999988777776666443  4568889999999999999999998888899


Q ss_pred             eEEEEcCCCC--CCCCcCCchhhHHHHHHHHHHHHHHHHHHHHH-HHHhhccCCCCceEEEEcCccccccccCCcccccC
Q 025509           81 NILINNAGIM--GTPFMLSKDNIELQFATNHLGHFLLTNLLLDT-MKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKI  157 (251)
Q Consensus        81 d~lv~~ag~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~  157 (251)
                      |++|||||..  .+..+.+.++|++.+++|+.+++.+++++.++ +.++     ..++||++||..+..+.+.       
T Consensus        91 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~l~~~-----~~~~~v~~sS~~~~~~~~~-------  158 (259)
T PRK08213         91 DILVNNAGATWGAPAEDHPVEAWDKVMNLNVRGLFLLSQAVAKRSMIPR-----GYGRIINVASVAGLGGNPP-------  158 (259)
T ss_pred             CEEEECCCCCCCCChhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHHhc-----CCeEEEEECChhhccCCCc-------
Confidence            9999999964  23456778899999999999999999999998 6553     3579999999766542110       


Q ss_pred             CCCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccC
Q 025509          158 NDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  211 (251)
Q Consensus       158 ~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  211 (251)
                          ..++...|+.+|++++.++++++.++.+.|  |+++.|+||+++|++...
T Consensus       159 ----~~~~~~~Y~~sKa~~~~~~~~~a~~~~~~g--i~v~~v~Pg~~~t~~~~~  206 (259)
T PRK08213        159 ----EVMDTIAYNTSKGAVINFTRALAAEWGPHG--IRVNAIAPGFFPTKMTRG  206 (259)
T ss_pred             ----cccCcchHHHHHHHHHHHHHHHHHHhcccC--EEEEEEecCcCCCcchhh
Confidence                113457899999999999999999999988  999999999999998654

>PRK12824 acetoacetyl-CoA reductase; Provisional

Probab=99.97  E-value=3.6e-30  Score=213.52  Aligned_cols=188  Identities=31%  Similarity=0.323  Sum_probs=160.8

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchh-HHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCC
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAA-GKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQ   79 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~-~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~   79 (251)
                      |++|||||++|||.++|+.|+++|++|++++|+... ..+.......  .+.++.++.+|+++.+++.++++++.+++++
T Consensus         3 k~vlItG~s~~iG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~   80 (245)
T PRK12824          3 KIALVTGAKRGIGSAIARELLNDGYRVIATYFSGNDCAKDWFEEYGF--TEDQVRLKELDVTDTEECAEALAEIEEEEGP   80 (245)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCcHHHHHHHHHHhhc--cCCeEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            589999999999999999999999999999998541 2222222211  2456889999999999999999999998999


Q ss_pred             eeEEEEcCCCCC--CCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccccC
Q 025509           80 LNILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKI  157 (251)
Q Consensus        80 id~lv~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~  157 (251)
                      +|++|||+|...  +..+.+.++|++.+++|+.+++.+++.+++.++++     +.++||++||..+..           
T Consensus        81 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-----~~~~iv~iss~~~~~-----------  144 (245)
T PRK12824         81 VDILVNNAGITRDSVFKRMSHQEWNDVINTNLNSVFNVTQPLFAAMCEQ-----GYGRIINISSVNGLK-----------  144 (245)
T ss_pred             CCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHh-----CCeEEEEECChhhcc-----------
Confidence            999999999753  35567889999999999999999999999999875     468999999987664           


Q ss_pred             CCCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCC
Q 025509          158 NDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRHN  212 (251)
Q Consensus       158 ~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~~  212 (251)
                          +.+++..|+++|+|+++|+++++.++.+.|  |+++.|+||++.|++.+..
T Consensus       145 ----~~~~~~~Y~~sK~a~~~~~~~l~~~~~~~~--i~v~~v~pg~~~t~~~~~~  193 (245)
T PRK12824        145 ----GQFGQTNYSAAKAGMIGFTKALASEGARYG--ITVNCIAPGYIATPMVEQM  193 (245)
T ss_pred             ----CCCCChHHHHHHHHHHHHHHHHHHHHHHhC--eEEEEEEEcccCCcchhhc
Confidence                566778999999999999999999999888  9999999999999987643

>KOG1611 consensus Predicted short chain-type dehydrogenase [General function prediction only]

Probab=99.97  E-value=3.8e-30  Score=203.30  Aligned_cols=196  Identities=33%  Similarity=0.430  Sum_probs=157.9

Q ss_pred             CEEEEECCCChhHHHHHHHHHHc-CCEE-EEEecCchhHHHHHHHHHhh-CCCCceEEEEecCCCHHHHHHHHHHHHhc-
Q 025509            1 MDIVITGATSGIGTETARVLALR-GVHV-VMGVRDIAAGKDVKETIVKE-IPSAKVDAMELDLSSLASVRNFASEYNIQ-   76 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~-G~~V-i~~~r~~~~~~~~~~~~~~~-~~~~~v~~~~~D~~~~~~i~~~~~~~~~~-   76 (251)
                      |.++||||++|||..++++|... |-.+ +.++|+++++   .+++... ....++.++++|+++.+++.++++++.+- 
T Consensus         4 ksv~ItGaNRGIGlgLVk~llk~~~i~~iiat~r~~e~a---~~~l~~k~~~d~rvHii~Ldvt~deS~~~~~~~V~~iV   80 (249)
T KOG1611|consen    4 KSVFITGANRGIGLGLVKELLKDKGIEVIIATARDPEKA---ATELALKSKSDSRVHIIQLDVTCDESIDNFVQEVEKIV   80 (249)
T ss_pred             ccEEEeccCcchhHHHHHHHhcCCCcEEEEEecCChHHh---hHHHHHhhccCCceEEEEEecccHHHHHHHHHHHHhhc
Confidence            56999999999999999999864 6655 4556777775   2233322 12568999999999999999999998775 


Q ss_pred             -CCCeeEEEEcCCCCCC---CCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhcc------CCCCceEEEEcCccccc
Q 025509           77 -HHQLNILINNAGIMGT---PFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARK------SGGEGRIINVSSEGHRL  146 (251)
Q Consensus        77 -~g~id~lv~~ag~~~~---~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~------~~~~g~iv~vsS~~~~~  146 (251)
                       ..++|++++|||+..+   ..+.+.+.|.+.+++|..|++.++|+++|++++.+..      +.....|||+||..+..
T Consensus        81 g~~GlnlLinNaGi~~~y~~~~~~~r~~~~~~~~tN~v~~il~~Q~~lPLLkkaas~~~gd~~s~~raaIinisS~~~s~  160 (249)
T KOG1611|consen   81 GSDGLNLLINNAGIALSYNTVLKPSRAVLLEQYETNAVGPILLTQAFLPLLKKAASKVSGDGLSVSRAAIINISSSAGSI  160 (249)
T ss_pred             ccCCceEEEeccceeeecccccCCcHHHHHHHhhhcchhHHHHHHHHHHHHHHHhhcccCCcccccceeEEEeecccccc
Confidence             4589999999998644   3455677899999999999999999999999886432      12246899999987664


Q ss_pred             cccCCcccccCCCCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCCc
Q 025509          147 AYHEGIRFDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRHNS  213 (251)
Q Consensus       147 ~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~~~  213 (251)
                      ..            ....++.+|..||+|++.|+|+++.|+.+.+  |.|..+|||+|.|+|.....
T Consensus       161 ~~------------~~~~~~~AYrmSKaAlN~f~ksls~dL~~~~--ilv~sihPGwV~TDMgg~~a  213 (249)
T KOG1611|consen  161 GG------------FRPGGLSAYRMSKAALNMFAKSLSVDLKDDH--ILVVSIHPGWVQTDMGGKKA  213 (249)
T ss_pred             CC------------CCCcchhhhHhhHHHHHHHHHHhhhhhcCCc--EEEEEecCCeEEcCCCCCCc
Confidence            21            1234567999999999999999999999988  99999999999999988543

>PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.97  E-value=3.9e-30  Score=214.89  Aligned_cols=192  Identities=24%  Similarity=0.276  Sum_probs=161.6

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCc-hhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCC
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDI-AAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQ   79 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~-~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~   79 (251)
                      |++|||||++|||+++|++|+++|++|++++|+. +...+..+.+.+.  +.++.++.+|+++++++.++++++.+.+++
T Consensus         3 k~vlItG~sg~iG~~la~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   80 (256)
T PRK12745          3 PVALVTGGRRGIGLGIARALAAAGFDLAINDRPDDEELAATQQELRAL--GVEVIFFPADVADLSAHEAMLDAAQAAWGR   80 (256)
T ss_pred             cEEEEeCCCchHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHhc--CCceEEEEecCCCHHHHHHHHHHHHHhcCC
Confidence            5799999999999999999999999999999864 3344444444332  456899999999999999999999999999


Q ss_pred             eeEEEEcCCCCC----CCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhcc-CCCCceEEEEcCccccccccCCccc
Q 025509           80 LNILINNAGIMG----TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARK-SGGEGRIINVSSEGHRLAYHEGIRF  154 (251)
Q Consensus        80 id~lv~~ag~~~----~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~-~~~~g~iv~vsS~~~~~~~~~~~~~  154 (251)
                      +|++|||||...    ++.+.+.++|++.+++|+.+++.+++++.+.|.++... .+..++||++||..+..        
T Consensus        81 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~--------  152 (256)
T PRK12745         81 IDCLVNNAGVGVKVRGDLLDLTPESFDRVLAINLRGPFFLTQAVAKRMLAQPEPEELPHRSIVFVSSVNAIM--------  152 (256)
T ss_pred             CCEEEECCccCCCCCCChhhCCHHHHHHHHHhcchHHHHHHHHHHHHHHhccCcCCCCCcEEEEECChhhcc--------
Confidence            999999999743    24567788999999999999999999999999875221 01146799999987765        


Q ss_pred             ccCCCCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccC
Q 025509          155 DKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  211 (251)
Q Consensus       155 ~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  211 (251)
                             +.+....|+.+|++++.++++++.++.+.|  |++++|+||.+.|++...
T Consensus       153 -------~~~~~~~Y~~sK~a~~~~~~~l~~~~~~~g--i~v~~i~pg~v~t~~~~~  200 (256)
T PRK12745        153 -------VSPNRGEYCISKAGLSMAAQLFAARLAEEG--IGVYEVRPGLIKTDMTAP  200 (256)
T ss_pred             -------CCCCCcccHHHHHHHHHHHHHHHHHHHHhC--CEEEEEecCCCcCccccc
Confidence                   556678999999999999999999999888  999999999999998654

>PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases

Probab=99.97  E-value=1.3e-30  Score=204.17  Aligned_cols=161  Identities=39%  Similarity=0.511  Sum_probs=145.4

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCC-EEEEEecC--chhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcC
Q 025509            1 MDIVITGATSGIGTETARVLALRGV-HVVMGVRD--IAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQH   77 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~-~Vi~~~r~--~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~   77 (251)
                      |++|||||++|||++++++|+++|. +|++++|+  .+..++..+++...  +.++.++++|++++++++++++++.+++
T Consensus         1 k~~lItGa~~giG~~~a~~l~~~g~~~v~~~~r~~~~~~~~~l~~~l~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~   78 (167)
T PF00106_consen    1 KTVLITGASSGIGRALARALARRGARVVILTSRSEDSEGAQELIQELKAP--GAKITFIECDLSDPESIRALIEEVIKRF   78 (167)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHTTTEEEEEEESSCHHHHHHHHHHHHHHT--TSEEEEEESETTSHHHHHHHHHHHHHHH
T ss_pred             CEEEEECCCCHHHHHHHHHHHhcCceEEEEeeeccccccccccccccccc--cccccccccccccccccccccccccccc
Confidence            7899999999999999999999966 78899998  66777777777644  5789999999999999999999999999


Q ss_pred             CCeeEEEEcCCCCCC--CCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccc
Q 025509           78 HQLNILINNAGIMGT--PFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFD  155 (251)
Q Consensus        78 g~id~lv~~ag~~~~--~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~  155 (251)
                      +++|++|||||....  ..+++.++|++++++|+.+++.+.++++|   +      +.++||++||..+..         
T Consensus        79 ~~ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~---~------~~g~iv~~sS~~~~~---------  140 (167)
T PF00106_consen   79 GPLDILINNAGIFSDGSLDDLSEEELERVFRVNLFGPFLLAKALLP---Q------GGGKIVNISSIAGVR---------  140 (167)
T ss_dssp             SSESEEEEECSCTTSBSGGGSHHHHHHHHHHHHTHHHHHHHHHHHH---H------TTEEEEEEEEGGGTS---------
T ss_pred             ccccccccccccccccccccccchhhhhccccccceeeeeeehhee---c------cccceEEecchhhcc---------
Confidence            999999999997653  56678899999999999999999999999   2      478999999998887         


Q ss_pred             cCCCCCCCCcccccchhHHHHHHHHHHHHHHh
Q 025509          156 KINDPSGYNGFRAYSQSKLANILHANELARRL  187 (251)
Q Consensus       156 ~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~  187 (251)
                            +.+++.+|+++|+|+++|+++++.|+
T Consensus       141 ------~~~~~~~Y~askaal~~~~~~la~e~  166 (167)
T PF00106_consen  141 ------GSPGMSAYSASKAALRGLTQSLAAEL  166 (167)
T ss_dssp             ------SSTTBHHHHHHHHHHHHHHHHHHHHH
T ss_pred             ------CCCCChhHHHHHHHHHHHHHHHHHhc
Confidence                  88999999999999999999999996

As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A ....

>PRK07775 short chain dehydrogenase; Provisional

Probab=99.97  E-value=5.3e-30  Score=216.66  Aligned_cols=186  Identities=25%  Similarity=0.338  Sum_probs=162.0

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      |++|||||++|||+++|++|+++|++|++++|+...+++..+.+...  +..+.++.+|+++++++.++++++...++++
T Consensus        11 ~~vlVtGa~g~iG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i   88 (274)
T PRK07775         11 RPALVAGASSGIGAATAIELAAAGFPVALGARRVEKCEELVDKIRAD--GGEAVAFPLDVTDPDSVKSFVAQAEEALGEI   88 (274)
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCeEEEEECCCCCHHHHHHHHHHHHHhcCCC
Confidence            57999999999999999999999999999999887776665555433  4568889999999999999999998888899


Q ss_pred             eEEEEcCCCCC--CCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccccCC
Q 025509           81 NILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKIN  158 (251)
Q Consensus        81 d~lv~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~  158 (251)
                      |++|||||...  +..+.+++++++.+++|+.+++.+++++++.+.++     ..++||++||..+..            
T Consensus        89 d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~-----~~g~iv~isS~~~~~------------  151 (274)
T PRK07775         89 EVLVSGAGDTYFGKLHEISTEQFESQVQIHLVGANRLATAVLPGMIER-----RRGDLIFVGSDVALR------------  151 (274)
T ss_pred             CEEEECCCcCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-----CCceEEEECChHhcC------------
Confidence            99999999753  24456788999999999999999999999998764     467999999987654            


Q ss_pred             CCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCccc
Q 025509          159 DPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIR  210 (251)
Q Consensus       159 ~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~  210 (251)
                         +.+....|+.+|++++.+++.++.++.+.|  |++++|+||+++|++..
T Consensus       152 ---~~~~~~~Y~~sK~a~~~l~~~~~~~~~~~g--i~v~~v~pG~~~t~~~~  198 (274)
T PRK07775        152 ---QRPHMGAYGAAKAGLEAMVTNLQMELEGTG--VRASIVHPGPTLTGMGW  198 (274)
T ss_pred             ---CCCCcchHHHHHHHHHHHHHHHHHHhcccC--eEEEEEeCCcccCcccc
Confidence               556677899999999999999999998888  99999999999998754

>PRK07201 short chain dehydrogenase; Provisional

Probab=99.97  E-value=3.8e-30  Score=241.83  Aligned_cols=187  Identities=29%  Similarity=0.304  Sum_probs=165.6

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      |++|||||++|||++++++|+++|++|++++|+++.+++..+++.+.  +.++.++++|+++.++++++++++.+.+|++
T Consensus       372 k~vlItGas~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~i  449 (657)
T PRK07201        372 KVVLITGASSGIGRATAIKVAEAGATVFLVARNGEALDELVAEIRAK--GGTAHAYTCDLTDSAAVDHTVKDILAEHGHV  449 (657)
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc--CCcEEEEEecCCCHHHHHHHHHHHHHhcCCC
Confidence            57999999999999999999999999999999998888887777554  4578999999999999999999999999999


Q ss_pred             eEEEEcCCCCCC--CCcC--CchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCccccc
Q 025509           81 NILINNAGIMGT--PFML--SKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDK  156 (251)
Q Consensus        81 d~lv~~ag~~~~--~~~~--~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~  156 (251)
                      |++|||||....  ..+.  ..++++..+++|+.+++.++++++|.|+++     +.++||++||.++..          
T Consensus       450 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-----~~g~iv~isS~~~~~----------  514 (657)
T PRK07201        450 DYLVNNAGRSIRRSVENSTDRFHDYERTMAVNYFGAVRLILGLLPHMRER-----RFGHVVNVSSIGVQT----------  514 (657)
T ss_pred             CEEEECCCCCCCCChhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhc-----CCCEEEEECChhhcC----------
Confidence            999999997432  2222  247899999999999999999999999875     468999999987765          


Q ss_pred             CCCCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccC
Q 025509          157 INDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  211 (251)
Q Consensus       157 ~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  211 (251)
                           +.+..+.|+++|+++++|+++++.|+.+.|  |+|++|+||+++|++..+
T Consensus       515 -----~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~--i~v~~v~pg~v~T~~~~~  562 (657)
T PRK07201        515 -----NAPRFSAYVASKAALDAFSDVAASETLSDG--ITFTTIHMPLVRTPMIAP  562 (657)
T ss_pred             -----CCCCcchHHHHHHHHHHHHHHHHHHHHhhC--CcEEEEECCcCcccccCc
Confidence                 566778999999999999999999999988  999999999999999764

>TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase

Probab=99.97  E-value=7.2e-30  Score=211.31  Aligned_cols=187  Identities=27%  Similarity=0.340  Sum_probs=161.9

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEec-CchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCC
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVR-DIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQ   79 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r-~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~   79 (251)
                      |++|||||++|||+++|++|+++|++|++++| ++...++..+++...  +.++.++.+|+++++++.++++++.+.+++
T Consensus         1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   78 (242)
T TIGR01829         1 RIALVTGGMGGIGTAICQRLAKDGYRVAANCGPNEERAEAWLQEQGAL--GFDFRVVEGDVSSFESCKAAVAKVEAELGP   78 (242)
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhh--CCceEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence            78999999999999999999999999998888 555555544444322  457889999999999999999999988899


Q ss_pred             eeEEEEcCCCCCC--CCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccccC
Q 025509           80 LNILINNAGIMGT--PFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKI  157 (251)
Q Consensus        80 id~lv~~ag~~~~--~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~  157 (251)
                      +|+||||||...+  ..+.+.+++++.+++|+.+++.+++++++.++++     +.++||++||..+..           
T Consensus        79 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-----~~~~iv~iss~~~~~-----------  142 (242)
T TIGR01829        79 IDVLVNNAGITRDATFKKMTYEQWSAVIDTNLNSVFNVTQPVIDGMRER-----GWGRIINISSVNGQK-----------  142 (242)
T ss_pred             CcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-----CCcEEEEEcchhhcC-----------
Confidence            9999999997543  4566788999999999999999999999999875     457999999977655           


Q ss_pred             CCCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccC
Q 025509          158 NDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  211 (251)
Q Consensus       158 ~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  211 (251)
                          +.+++..|+++|++++.|+++++.++.+.|  |++++++||++.|++.+.
T Consensus       143 ----~~~~~~~y~~sk~a~~~~~~~la~~~~~~~--i~v~~i~pg~~~t~~~~~  190 (242)
T TIGR01829       143 ----GQFGQTNYSAAKAGMIGFTKALAQEGATKG--VTVNTISPGYIATDMVMA  190 (242)
T ss_pred             ----CCCCcchhHHHHHHHHHHHHHHHHHhhhhC--eEEEEEeeCCCcCccccc
Confidence                556778999999999999999999999888  999999999999998764

(R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families.

>COG1028 FabG Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only]

Probab=99.97  E-value=4e-30  Score=214.29  Aligned_cols=186  Identities=34%  Similarity=0.410  Sum_probs=157.8

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchh--HHHHHHHHHhhCCC-CceEEEEecCCC-HHHHHHHHHHHHhc
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAA--GKDVKETIVKEIPS-AKVDAMELDLSS-LASVRNFASEYNIQ   76 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~--~~~~~~~~~~~~~~-~~v~~~~~D~~~-~~~i~~~~~~~~~~   76 (251)
                      |++|||||++|||+++|+.|+++|++|+++.|+...  .+...+...  ..+ ..+.+..+|+++ .++++.+++.+...
T Consensus         6 ~~ilITGas~GiG~aia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~Dvs~~~~~v~~~~~~~~~~   83 (251)
T COG1028           6 KVALVTGASSGIGRAIARALAREGARVVVAARRSEEEAAEALAAAIK--EAGGGRAAAVAADVSDDEESVEALVAAAEEE   83 (251)
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCeEEEEcCCCchhhHHHHHHHHH--hcCCCcEEEEEecCCCCHHHHHHHHHHHHHH
Confidence            579999999999999999999999999888887654  333333332  112 368888899998 99999999999999


Q ss_pred             CCCeeEEEEcCCCCC---CCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcc
Q 025509           77 HHQLNILINNAGIMG---TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIR  153 (251)
Q Consensus        77 ~g~id~lv~~ag~~~---~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~  153 (251)
                      +|++|++|||||+..   +..+.+.++|++++++|+.+++.+++.+.|.+.+      +  +||++||..+. .      
T Consensus        84 ~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~------~--~Iv~isS~~~~-~------  148 (251)
T COG1028          84 FGRIDILVNNAGIAGPDAPLEELTEEDWDRVIDVNLLGAFLLTRAALPLMKK------Q--RIVNISSVAGL-G------  148 (251)
T ss_pred             cCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHhHHHHHHHHHHHHHhhhh------C--eEEEECCchhc-C------
Confidence            999999999999863   5677888999999999999999999988888873      2  99999997764 2      


Q ss_pred             cccCCCCCCCCc-ccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCCcc
Q 025509          154 FDKINDPSGYNG-FRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRHNSL  214 (251)
Q Consensus       154 ~~~~~~~~~~~~-~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~~~~  214 (251)
                               .++ +.+|++||+|+.+|+++++.|+.+.|  |+++.|+||++.|++......
T Consensus       149 ---------~~~~~~~Y~~sK~al~~~~~~l~~e~~~~g--i~v~~v~PG~~~t~~~~~~~~  199 (251)
T COG1028         149 ---------GPPGQAAYAASKAALIGLTKALALELAPRG--IRVNAVAPGYIDTPMTAALES  199 (251)
T ss_pred             ---------CCCCcchHHHHHHHHHHHHHHHHHHHhhhC--cEEEEEEeccCCCcchhhhhh
Confidence                     223 58999999999999999999999999  999999999999999875433

>PRK06198 short chain dehydrogenase; Provisional

Probab=99.97  E-value=6.1e-30  Score=214.23  Aligned_cols=186  Identities=26%  Similarity=0.320  Sum_probs=163.0

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCE-EEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCC
Q 025509            1 MDIVITGATSGIGTETARVLALRGVH-VVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQ   79 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~-Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~   79 (251)
                      |+++||||++|||++++++|+++|++ |++++|+.+...+..+++.+.  +..+.++.+|+++++++.++++.+.+.+++
T Consensus         7 k~vlItGa~g~iG~~la~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   84 (260)
T PRK06198          7 KVALVTGGTQGLGAAIARAFAERGAAGLVICGRNAEKGEAQAAELEAL--GAKAVFVQADLSDVEDCRRVVAAADEAFGR   84 (260)
T ss_pred             cEEEEeCCCchHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHHHHHhc--CCeEEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence            57999999999999999999999998 999999887777666666332  557888999999999999999999888899


Q ss_pred             eeEEEEcCCCCCC--CCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccccC
Q 025509           80 LNILINNAGIMGT--PFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKI  157 (251)
Q Consensus        80 id~lv~~ag~~~~--~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~  157 (251)
                      +|++|||+|....  ..+.+.++|+..+++|+.+++.+++++++++.++.    ..+++|++||..+..           
T Consensus        85 id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~----~~g~iv~~ss~~~~~-----------  149 (260)
T PRK06198         85 LDALVNAAGLTDRGTILDTSPELFDRHFAVNVRAPFFLMQEAIKLMRRRK----AEGTIVNIGSMSAHG-----------  149 (260)
T ss_pred             CCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC----CCCEEEEECCccccc-----------
Confidence            9999999997532  45678899999999999999999999999997741    257999999987654           


Q ss_pred             CCCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcc
Q 025509          158 NDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNII  209 (251)
Q Consensus       158 ~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~  209 (251)
                          +.+....|+.+|+++++|+++++.|+.+.|  |++++|+||++.|++.
T Consensus       150 ----~~~~~~~Y~~sK~a~~~~~~~~a~e~~~~~--i~v~~i~pg~~~t~~~  195 (260)
T PRK06198        150 ----GQPFLAAYCASKGALATLTRNAAYALLRNR--IRVNGLNIGWMATEGE  195 (260)
T ss_pred             ----CCCCcchhHHHHHHHHHHHHHHHHHhcccC--eEEEEEeeccccCcch
Confidence                456678999999999999999999999988  9999999999999974

>PRK12742 oxidoreductase; Provisional

Probab=99.97  E-value=1.4e-29  Score=209.21  Aligned_cols=177  Identities=27%  Similarity=0.339  Sum_probs=147.2

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEec-CchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCC
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVR-DIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQ   79 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r-~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~   79 (251)
                      |++|||||++|||+++|+.|+++|++|+++++ +.+..+++..++       .+.++.+|+++.+++.+.+++    +++
T Consensus         7 k~vlItGasggIG~~~a~~l~~~G~~v~~~~~~~~~~~~~l~~~~-------~~~~~~~D~~~~~~~~~~~~~----~~~   75 (237)
T PRK12742          7 KKVLVLGGSRGIGAAIVRRFVTDGANVRFTYAGSKDAAERLAQET-------GATAVQTDSADRDAVIDVVRK----SGA   75 (237)
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHh-------CCeEEecCCCCHHHHHHHHHH----hCC
Confidence            57999999999999999999999999988876 444444332221       256788999999988877653    468


Q ss_pred             eeEEEEcCCCCC--CCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccccC
Q 025509           80 LNILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKI  157 (251)
Q Consensus        80 id~lv~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~  157 (251)
                      +|++|||||...  +..+.++++|++.+++|+.+++.+++.+++++.+       .++||++||..+..           
T Consensus        76 id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-------~g~iv~isS~~~~~-----------  137 (237)
T PRK12742         76 LDILVVNAGIAVFGDALELDADDIDRLFKINIHAPYHASVEAARQMPE-------GGRIIIIGSVNGDR-----------  137 (237)
T ss_pred             CcEEEECCCCCCCCCcccCCHHHHHHHHhHHHHHHHHHHHHHHHHHhc-------CCeEEEEecccccc-----------
Confidence            999999999753  3556788999999999999999999999999854       47999999976532           


Q ss_pred             CCCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccC
Q 025509          158 NDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  211 (251)
Q Consensus       158 ~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  211 (251)
                         .+.+++..|+.+|++++.++++++.++.+.|  |+||+|+||+++|++...
T Consensus       138 ---~~~~~~~~Y~~sKaa~~~~~~~la~~~~~~g--i~v~~v~Pg~~~t~~~~~  186 (237)
T PRK12742        138 ---MPVAGMAAYAASKSALQGMARGLARDFGPRG--ITINVVQPGPIDTDANPA  186 (237)
T ss_pred             ---CCCCCCcchHHhHHHHHHHHHHHHHHHhhhC--eEEEEEecCcccCCcccc
Confidence               1556778999999999999999999999999  999999999999998653

>PRK09134 short chain dehydrogenase; Provisional

Probab=99.97  E-value=1.9e-29  Score=211.32  Aligned_cols=183  Identities=22%  Similarity=0.286  Sum_probs=155.4

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEec-CchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCC
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVR-DIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQ   79 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r-~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~   79 (251)
                      |++|||||++|||++++++|+++|++|+++.+ +.+.++.+.+++...  +..+.++.+|++|.+++.++++++.+.+++
T Consensus        10 k~vlItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~~   87 (258)
T PRK09134         10 RAALVTGAARRIGRAIALDLAAHGFDVAVHYNRSRDEAEALAAEIRAL--GRRAVALQADLADEAEVRALVARASAALGP   87 (258)
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhc--CCeEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            57999999999999999999999999988766 445555666655443  456889999999999999999999888899


Q ss_pred             eeEEEEcCCCCC--CCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccccC
Q 025509           80 LNILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKI  157 (251)
Q Consensus        80 id~lv~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~  157 (251)
                      +|+||||||...  +..+.++++|++.+++|+.+++.+++++.+.+.++     ..+++|+++|..+..           
T Consensus        88 iD~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-----~~~~iv~~~s~~~~~-----------  151 (258)
T PRK09134         88 ITLLVNNASLFEYDSAASFTRASWDRHMATNLRAPFVLAQAFARALPAD-----ARGLVVNMIDQRVWN-----------  151 (258)
T ss_pred             CCEEEECCcCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-----CCceEEEECchhhcC-----------
Confidence            999999999753  35567888999999999999999999999998764     367999998865443           


Q ss_pred             CCCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCc
Q 025509          158 NDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNI  208 (251)
Q Consensus       158 ~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~  208 (251)
                          +.+.+..|+++|+++++++++++.++.+ +  |+|++|+||++.|+.
T Consensus       152 ----~~p~~~~Y~~sK~a~~~~~~~la~~~~~-~--i~v~~i~PG~v~t~~  195 (258)
T PRK09134        152 ----LNPDFLSYTLSKAALWTATRTLAQALAP-R--IRVNAIGPGPTLPSG  195 (258)
T ss_pred             ----CCCCchHHHHHHHHHHHHHHHHHHHhcC-C--cEEEEeecccccCCc
Confidence                4556678999999999999999999975 3  999999999998875

>PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated

Probab=99.97  E-value=5.5e-30  Score=213.49  Aligned_cols=178  Identities=27%  Similarity=0.372  Sum_probs=157.6

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      |++|||||++|||++++++|+++|++|++++|+.         +...  +..+.++++|+++.++++++++++.++++++
T Consensus         9 k~vlItGas~~iG~~la~~l~~~G~~v~~~~~~~---------~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   77 (252)
T PRK08220          9 KTVWVTGAAQGIGYAVALAFVEAGAKVIGFDQAF---------LTQE--DYPFATFVLDVSDAAAVAQVCQRLLAETGPL   77 (252)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEecch---------hhhc--CCceEEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence            5799999999999999999999999999999975         1111  4568899999999999999999999999999


Q ss_pred             eEEEEcCCCCC--CCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccccCC
Q 025509           81 NILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKIN  158 (251)
Q Consensus        81 d~lv~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~  158 (251)
                      |++|||+|...  +..+.+.++++..+++|+.+++.+++++.++|+++     +.++||++||..+..            
T Consensus        78 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-----~~g~iv~~ss~~~~~------------  140 (252)
T PRK08220         78 DVLVNAAGILRMGATDSLSDEDWQQTFAVNAGGAFNLFRAVMPQFRRQ-----RSGAIVTVGSNAAHV------------  140 (252)
T ss_pred             CEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhC-----CCCEEEEECCchhcc------------
Confidence            99999999753  35567888999999999999999999999999875     468999999977654            


Q ss_pred             CCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccC
Q 025509          159 DPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  211 (251)
Q Consensus       159 ~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  211 (251)
                         +.++...|+.+|++++.|++++++|+.+.|  |+|+.|.||++.|++...
T Consensus       141 ---~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~--i~v~~i~pg~v~t~~~~~  188 (252)
T PRK08220        141 ---PRIGMAAYGASKAALTSLAKCVGLELAPYG--VRCNVVSPGSTDTDMQRT  188 (252)
T ss_pred             ---CCCCCchhHHHHHHHHHHHHHHHHHhhHhC--eEEEEEecCcCcchhhhh
Confidence               566778999999999999999999999988  999999999999998653

>PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.97  E-value=1.4e-29  Score=210.87  Aligned_cols=188  Identities=26%  Similarity=0.296  Sum_probs=162.2

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      +++|||||++|||.++++.|+++|++|++++|++.++++..+++.+.  +.++.++++|+++.++++++++.+.+.++++
T Consensus         6 ~~~lItG~~g~iG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   83 (253)
T PRK08217          6 KVIVITGGAQGLGRAMAEYLAQKGAKLALIDLNQEKLEEAVAECGAL--GTEVRGYAANVTDEEDVEATFAQIAEDFGQL   83 (253)
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCceEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence            57999999999999999999999999999999988877777766544  4578889999999999999999998888899


Q ss_pred             eEEEEcCCCCCC--C---------CcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCcccccccc
Q 025509           81 NILINNAGIMGT--P---------FMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYH  149 (251)
Q Consensus        81 d~lv~~ag~~~~--~---------~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~  149 (251)
                      |++|||||....  .         .+.+.++++.++++|+.+++.+.+.+.|.+.++.    ..++|+++||.+. .   
T Consensus        84 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~----~~~~iv~~ss~~~-~---  155 (253)
T PRK08217         84 NGLINNAGILRDGLLVKAKDGKVTSKMSLEQFQSVIDVNLTGVFLCGREAAAKMIESG----SKGVIINISSIAR-A---  155 (253)
T ss_pred             CEEEECCCccCcCcccccccccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcC----CCeEEEEEccccc-c---
Confidence            999999996432  1         3557788999999999999999999999997642    3578999998643 2   


Q ss_pred             CCcccccCCCCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCC
Q 025509          150 EGIRFDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRHN  212 (251)
Q Consensus       150 ~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~~  212 (251)
                                  +.++...|+++|+|+++++++|+.++.+.|  |++++++||++.|++.+..
T Consensus       156 ------------~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~--i~v~~v~pg~v~t~~~~~~  204 (253)
T PRK08217        156 ------------GNMGQTNYSASKAGVAAMTVTWAKELARYG--IRVAAIAPGVIETEMTAAM  204 (253)
T ss_pred             ------------CCCCCchhHHHHHHHHHHHHHHHHHHHHcC--cEEEEEeeCCCcCcccccc
Confidence                        455678999999999999999999998888  9999999999999987653

>PRK12746 short chain dehydrogenase; Provisional

Probab=99.97  E-value=8.6e-30  Score=212.63  Aligned_cols=185  Identities=32%  Similarity=0.412  Sum_probs=158.9

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEE-ecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcC--
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMG-VRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQH--   77 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~-~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~--   77 (251)
                      |+++||||++|||+++|++|+++|++|++. .|+.+..++..+.+...  +..+.++.+|++|++++.++++++.+++  
T Consensus         7 ~~ilItGasg~iG~~la~~l~~~G~~v~i~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~d~~~i~~~~~~~~~~~~~   84 (254)
T PRK12746          7 KVALVTGASRGIGRAIAMRLANDGALVAIHYGRNKQAADETIREIESN--GGKAFLIEADLNSIDGVKKLVEQLKNELQI   84 (254)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhc--CCcEEEEEcCcCCHHHHHHHHHHHHHHhcc
Confidence            579999999999999999999999998764 68776666666555432  3568889999999999999999988765  


Q ss_pred             ----CCeeEEEEcCCCCCC--CCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCC
Q 025509           78 ----HQLNILINNAGIMGT--PFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEG  151 (251)
Q Consensus        78 ----g~id~lv~~ag~~~~--~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~  151 (251)
                          +++|++|||||....  ..+.+.+.|+..+++|+.+++.+++.+++.+..       .+++|++||..+..     
T Consensus        85 ~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-------~~~~v~~sS~~~~~-----  152 (254)
T PRK12746         85 RVGTSEIDILVNNAGIGTQGTIENTTEEIFDEIMAVNIKAPFFLIQQTLPLLRA-------EGRVINISSAEVRL-----  152 (254)
T ss_pred             ccCCCCccEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhc-------CCEEEEECCHHhcC-----
Confidence                479999999997533  456688889999999999999999999999864       36999999987655     


Q ss_pred             cccccCCCCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccC
Q 025509          152 IRFDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  211 (251)
Q Consensus       152 ~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  211 (251)
                                +.+++..|+.+|+|++.++++++.++.+.|  ++++.|+||++.|++...
T Consensus       153 ----------~~~~~~~Y~~sK~a~~~~~~~~~~~~~~~~--i~v~~v~pg~~~t~~~~~  200 (254)
T PRK12746        153 ----------GFTGSIAYGLSKGALNTMTLPLAKHLGERG--ITVNTIMPGYTKTDINAK  200 (254)
T ss_pred             ----------CCCCCcchHhhHHHHHHHHHHHHHHHhhcC--cEEEEEEECCccCcchhh
Confidence                      567778999999999999999999999888  999999999999998654

>PRK06181 short chain dehydrogenase; Provisional

Probab=99.97  E-value=1.1e-29  Score=213.11  Aligned_cols=186  Identities=27%  Similarity=0.318  Sum_probs=163.9

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      +++|||||++|||.++++.|+++|++|++++|++...++..+.+...  +..+.++.+|+++.++++++++++.++++++
T Consensus         2 ~~vlVtGasg~iG~~la~~l~~~g~~Vi~~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i   79 (263)
T PRK06181          2 KVVIITGASEGIGRALAVRLARAGAQLVLAARNETRLASLAQELADH--GGEALVVPTDVSDAEACERLIEAAVARFGGI   79 (263)
T ss_pred             CEEEEecCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            57999999999999999999999999999999988777776666543  4578899999999999999999998888999


Q ss_pred             eEEEEcCCCCCC--CCcC-CchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccccC
Q 025509           81 NILINNAGIMGT--PFML-SKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKI  157 (251)
Q Consensus        81 d~lv~~ag~~~~--~~~~-~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~  157 (251)
                      |++|||||....  ..+. +.+++++.+++|+.+++.+++.+++++.+.      .+++|++||..+..           
T Consensus        80 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~------~~~iv~~sS~~~~~-----------  142 (263)
T PRK06181         80 DILVNNAGITMWSRFDELTDLSVFERVMRVNYLGAVYCTHAALPHLKAS------RGQIVVVSSLAGLT-----------  142 (263)
T ss_pred             CEEEECCCcccccchhccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc------CCEEEEEecccccC-----------
Confidence            999999996532  4455 778899999999999999999999998763      57999999987665           


Q ss_pred             CCCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccC
Q 025509          158 NDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  211 (251)
Q Consensus       158 ~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  211 (251)
                          +.+++..|+.+|+++++++++++.++.+.|  |+++++.||++.|++.+.
T Consensus       143 ----~~~~~~~Y~~sK~~~~~~~~~l~~~~~~~~--i~~~~i~pg~v~t~~~~~  190 (263)
T PRK06181        143 ----GVPTRSGYAASKHALHGFFDSLRIELADDG--VAVTVVCPGFVATDIRKR  190 (263)
T ss_pred             ----CCCCccHHHHHHHHHHHHHHHHHHHhhhcC--ceEEEEecCccccCcchh
Confidence                566778999999999999999999999888  999999999999998653

>PRK09730 putative NAD(P)-binding oxidoreductase; Provisional

Probab=99.97  E-value=2.5e-29  Score=208.71  Aligned_cols=190  Identities=31%  Similarity=0.397  Sum_probs=160.7

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEE-ecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCC
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMG-VRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQ   79 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~-~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~   79 (251)
                      |++|||||++|||++++++|+++|++|+++ .|+++..++...++.+.  +..+.++++|++|.++++++++++.+.+++
T Consensus         2 ~~~lItGa~g~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~d~~~i~~~~~~~~~~~~~   79 (247)
T PRK09730          2 AIALVTGGSRGIGRATALLLAQEGYTVAVNYQQNLHAAQEVVNLITQA--GGKAFVLQADISDENQVVAMFTAIDQHDEP   79 (247)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhC--CCeEEEEEccCCCHHHHHHHHHHHHHhCCC
Confidence            579999999999999999999999999764 57776666666665443  456888999999999999999999988999


Q ss_pred             eeEEEEcCCCCC---CCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCccccc
Q 025509           80 LNILINNAGIMG---TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDK  156 (251)
Q Consensus        80 id~lv~~ag~~~---~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~  156 (251)
                      +|++|||||...   +..+.+.++++..+++|+.+++.+++++++.+.++..  +..++||++||..+..          
T Consensus        80 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~--~~~g~~v~~sS~~~~~----------  147 (247)
T PRK09730         80 LAALVNNAGILFTQCTVENLTAERINRVLSTNVTGYFLCCREAVKRMALKHG--GSGGAIVNVSSAASRL----------  147 (247)
T ss_pred             CCEEEECCCCCCCCCccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCC--CCCcEEEEECchhhcc----------
Confidence            999999999642   2456778899999999999999999999999987521  1257899999987665          


Q ss_pred             CCCCCCCCc-ccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccC
Q 025509          157 INDPSGYNG-FRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  211 (251)
Q Consensus       157 ~~~~~~~~~-~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  211 (251)
                           +.++ +..|+++|++++.++++++.++.+.|  |+++.|+||+++||+...
T Consensus       148 -----~~~~~~~~Y~~sK~~~~~~~~~l~~~~~~~~--i~v~~i~pg~~~~~~~~~  196 (247)
T PRK09730        148 -----GAPGEYVDYAASKGAIDTLTTGLSLEVAAQG--IRVNCVRPGFIYTEMHAS  196 (247)
T ss_pred             -----CCCCcccchHhHHHHHHHHHHHHHHHHHHhC--eEEEEEEeCCCcCccccc
Confidence                 3333 45799999999999999999999888  999999999999998653

>PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional

Probab=99.97  E-value=1.5e-29  Score=210.44  Aligned_cols=187  Identities=25%  Similarity=0.292  Sum_probs=163.2

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCC--CHHHHHHHHHHHHhcCC
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLS--SLASVRNFASEYNIQHH   78 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~--~~~~i~~~~~~~~~~~g   78 (251)
                      |++|||||+++||.+++++|+++|++|++++|+..++++..+++.+.. ...+.++.+|++  +.+++.++++.+.+.++
T Consensus        13 k~vlItG~~g~iG~~la~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~   91 (247)
T PRK08945         13 RIILVTGAGDGIGREAALTYARHGATVILLGRTEEKLEAVYDEIEAAG-GPQPAIIPLDLLTATPQNYQQLADTIEEQFG   91 (247)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHhcC-CCCceEEEecccCCCHHHHHHHHHHHHHHhC
Confidence            689999999999999999999999999999999888877777775542 345777778886  78999999999988889


Q ss_pred             CeeEEEEcCCCCC---CCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccc
Q 025509           79 QLNILINNAGIMG---TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFD  155 (251)
Q Consensus        79 ~id~lv~~ag~~~---~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~  155 (251)
                      ++|+||||||...   +..+.+.++|++.+++|+.+++.+++++++.|.++     +.++||++||..+..         
T Consensus        92 ~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~l~~~-----~~~~iv~~ss~~~~~---------  157 (247)
T PRK08945         92 RLDGVLHNAGLLGELGPMEQQDPEVWQDVMQVNVNATFMLTQALLPLLLKS-----PAASLVFTSSSVGRQ---------  157 (247)
T ss_pred             CCCEEEECCcccCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhC-----CCCEEEEEccHhhcC---------
Confidence            9999999999643   34567788999999999999999999999999875     468999999987665         


Q ss_pred             cCCCCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCccc
Q 025509          156 KINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIR  210 (251)
Q Consensus       156 ~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~  210 (251)
                            +.+.+..|+++|++++.|+++++.++...|  |++++++||.+.|++..
T Consensus       158 ------~~~~~~~Y~~sK~a~~~~~~~~~~~~~~~~--i~~~~v~pg~v~t~~~~  204 (247)
T PRK08945        158 ------GRANWGAYAVSKFATEGMMQVLADEYQGTN--LRVNCINPGGTRTAMRA  204 (247)
T ss_pred             ------CCCCCcccHHHHHHHHHHHHHHHHHhcccC--EEEEEEecCCccCcchh
Confidence                  566778999999999999999999999888  99999999999998753

>PRK06924 short chain dehydrogenase; Provisional

Probab=99.97  E-value=4.3e-30  Score=214.11  Aligned_cols=186  Identities=23%  Similarity=0.314  Sum_probs=153.6

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCc-hhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCC
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDI-AAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQ   79 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~-~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~   79 (251)
                      |++|||||++|||+++|++|+++|++|++++|++ +.+++.    .+.. +.++.++++|+++.++++++++++...++.
T Consensus         2 k~vlItGasggiG~~ia~~l~~~g~~V~~~~r~~~~~~~~~----~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   76 (251)
T PRK06924          2 RYVIITGTSQGLGEAIANQLLEKGTHVISISRTENKELTKL----AEQY-NSNLTFHSLDLQDVHELETNFNEILSSIQE   76 (251)
T ss_pred             cEEEEecCCchHHHHHHHHHHhcCCEEEEEeCCchHHHHHH----Hhcc-CCceEEEEecCCCHHHHHHHHHHHHHhcCc
Confidence            6799999999999999999999999999999986 333322    2222 456888999999999999999998766542


Q ss_pred             ----eeEEEEcCCCCC---CCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCc
Q 025509           80 ----LNILINNAGIMG---TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGI  152 (251)
Q Consensus        80 ----id~lv~~ag~~~---~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~  152 (251)
                          .+++|+|||...   ++.+.+.++|++.+++|+.+++.+++.++|++++.    +..++||++||..+..      
T Consensus        77 ~~~~~~~~v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~----~~~~~iv~~sS~~~~~------  146 (251)
T PRK06924         77 DNVSSIHLINNAGMVAPIKPIEKAESEELITNVHLNLLAPMILTSTFMKHTKDW----KVDKRVINISSGAAKN------  146 (251)
T ss_pred             ccCCceEEEEcceecccCcccccCCHHHHHHHhccceehHHHHHHHHHHHHhcc----CCCceEEEecchhhcC------
Confidence                228999999753   35577889999999999999999999999999764    1357999999976654      


Q ss_pred             ccccCCCCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCccc
Q 025509          153 RFDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIR  210 (251)
Q Consensus       153 ~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~  210 (251)
                               +.+++..|+++|+|+++|++.++.|+.....+|+|++|.||+++|++..
T Consensus       147 ---------~~~~~~~Y~~sKaa~~~~~~~la~e~~~~~~~i~v~~v~Pg~v~t~~~~  195 (251)
T PRK06924        147 ---------PYFGWSAYCSSKAGLDMFTQTVATEQEEEEYPVKIVAFSPGVMDTNMQA  195 (251)
T ss_pred             ---------CCCCcHHHhHHHHHHHHHHHHHHHHhhhcCCCeEEEEecCCccccHhHH
Confidence                     6677889999999999999999999864322399999999999999855

>PRK07578 short chain dehydrogenase; Provisional

Probab=99.97  E-value=6.6e-30  Score=206.09  Aligned_cols=161  Identities=18%  Similarity=0.234  Sum_probs=142.3

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      |++|||||++|||++++++|+++ ++|++++|+..                   .+++|+++.+++++++++    .+++
T Consensus         1 ~~vlItGas~giG~~la~~l~~~-~~vi~~~r~~~-------------------~~~~D~~~~~~~~~~~~~----~~~i   56 (199)
T PRK07578          1 MKILVIGASGTIGRAVVAELSKR-HEVITAGRSSG-------------------DVQVDITDPASIRALFEK----VGKV   56 (199)
T ss_pred             CeEEEEcCCcHHHHHHHHHHHhc-CcEEEEecCCC-------------------ceEecCCChHHHHHHHHh----cCCC
Confidence            57999999999999999999999 99999999752                   368999999999998875    3689


Q ss_pred             eEEEEcCCCCC--CCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccccCC
Q 025509           81 NILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKIN  158 (251)
Q Consensus        81 d~lv~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~  158 (251)
                      |++|||||...  +..+.++++|++.+++|+.+++.+++++.|+|.+       .++|+++||..+..            
T Consensus        57 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-------~g~iv~iss~~~~~------------  117 (199)
T PRK07578         57 DAVVSAAGKVHFAPLAEMTDEDFNVGLQSKLMGQVNLVLIGQHYLND-------GGSFTLTSGILSDE------------  117 (199)
T ss_pred             CEEEECCCCCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhc-------CCeEEEEcccccCC------------
Confidence            99999999643  3556788999999999999999999999999964       47999999977665            


Q ss_pred             CCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCccc
Q 025509          159 DPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIR  210 (251)
Q Consensus       159 ~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~  210 (251)
                         +.+++..|+++|+|+++|+++++.|+ ++|  |+||+|+||+++|++..
T Consensus       118 ---~~~~~~~Y~~sK~a~~~~~~~la~e~-~~g--i~v~~i~Pg~v~t~~~~  163 (199)
T PRK07578        118 ---PIPGGASAATVNGALEGFVKAAALEL-PRG--IRINVVSPTVLTESLEK  163 (199)
T ss_pred             ---CCCCchHHHHHHHHHHHHHHHHHHHc-cCC--eEEEEEcCCcccCchhh
Confidence               66788899999999999999999999 888  99999999999998743

>PRK08177 short chain dehydrogenase; Provisional

Probab=99.97  E-value=1.6e-29  Score=207.70  Aligned_cols=182  Identities=25%  Similarity=0.308  Sum_probs=152.7

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      |+++||||++|||++++++|+++|++|++++|++...++..+       ...+.++.+|++|.++++++++++.+  +++
T Consensus         2 k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~-------~~~~~~~~~D~~d~~~~~~~~~~~~~--~~i   72 (225)
T PRK08177          2 RTALIIGASRGLGLGLVDRLLERGWQVTATVRGPQQDTALQA-------LPGVHIEKLDMNDPASLDQLLQRLQG--QRF   72 (225)
T ss_pred             CEEEEeCCCchHHHHHHHHHHhCCCEEEEEeCCCcchHHHHh-------ccccceEEcCCCCHHHHHHHHHHhhc--CCC
Confidence            589999999999999999999999999999999776544321       13577888999999999999998754  479


Q ss_pred             eEEEEcCCCCC----CCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCccccc
Q 025509           81 NILINNAGIMG----TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDK  156 (251)
Q Consensus        81 d~lv~~ag~~~----~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~  156 (251)
                      |+||||||...    +..+.+.++++..+++|+.+++.++++++|.+.+      ..++++++||..+....        
T Consensus        73 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~------~~~~iv~~ss~~g~~~~--------  138 (225)
T PRK08177         73 DLLFVNAGISGPAHQSAADATAAEIGQLFLTNAIAPIRLARRLLGQVRP------GQGVLAFMSSQLGSVEL--------  138 (225)
T ss_pred             CEEEEcCcccCCCCCCcccCCHHHHhhheeeeeeHHHHHHHHHHHhhhh------cCCEEEEEccCcccccc--------
Confidence            99999999753    2456778899999999999999999999999865      24789999987654310        


Q ss_pred             CCCCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccC
Q 025509          157 INDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  211 (251)
Q Consensus       157 ~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  211 (251)
                          .+...+..|+++|++++.|+++++.|+.++|  |+||+|+||+++|++...
T Consensus       139 ----~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~--i~v~~i~PG~i~t~~~~~  187 (225)
T PRK08177        139 ----PDGGEMPLYKASKAALNSMTRSFVAELGEPT--LTVLSMHPGWVKTDMGGD  187 (225)
T ss_pred             ----CCCCCccchHHHHHHHHHHHHHHHHHhhcCC--eEEEEEcCCceecCCCCC
Confidence                1233566899999999999999999999988  999999999999999764

>PRK12827 short chain dehydrogenase; Provisional

Probab=99.97  E-value=4.9e-29  Score=207.03  Aligned_cols=188  Identities=30%  Similarity=0.358  Sum_probs=158.5

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecC----chhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhc
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRD----IAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQ   76 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~----~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~   76 (251)
                      |++|||||++|||+++|++|+++|++|++++|.    ++..++..+++...  +..+.++.+|+++.++++++++++.+.
T Consensus         7 ~~ilItGasg~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~~   84 (249)
T PRK12827          7 RRVLITGGSGGLGRAIAVRLAADGADVIVLDIHPMRGRAEADAVAAGIEAA--GGKALGLAFDVRDFAATRAALDAGVEE   84 (249)
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCeEEEEcCcccccHHHHHHHHHHHHhc--CCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence            579999999999999999999999999987653    33344444444332  457889999999999999999999888


Q ss_pred             CCCeeEEEEcCCCCC--CCCcCCchhhHHHHHHHHHHHHHHHHHHH-HHHHHhhccCCCCceEEEEcCccccccccCCcc
Q 025509           77 HHQLNILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLL-DTMKKTARKSGGEGRIINVSSEGHRLAYHEGIR  153 (251)
Q Consensus        77 ~g~id~lv~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~-~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~  153 (251)
                      ++++|++|||||...  +..+.+.++|+..+++|+.+++.+++++. +.+.++     ..+++|++||..+..       
T Consensus        85 ~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-----~~~~iv~~sS~~~~~-------  152 (249)
T PRK12827         85 FGRLDILVNNAGIATDAAFAELSIEEWDDVIDVNLDGFFNVTQAALPPMIRAR-----RGGRIVNIASVAGVR-------  152 (249)
T ss_pred             hCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhcC-----CCeEEEEECCchhcC-------
Confidence            889999999999754  35567888999999999999999999999 555543     457999999987765       


Q ss_pred             cccCCCCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCC
Q 025509          154 FDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRHN  212 (251)
Q Consensus       154 ~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~~  212 (251)
                              +.+++..|+.+|++++.++++++.++.+.|  |++++++||+++|++....
T Consensus       153 --------~~~~~~~y~~sK~a~~~~~~~l~~~~~~~~--i~~~~i~pg~v~t~~~~~~  201 (249)
T PRK12827        153 --------GNRGQVNYAASKAGLIGLTKTLANELAPRG--ITVNAVAPGAINTPMADNA  201 (249)
T ss_pred             --------CCCCCchhHHHHHHHHHHHHHHHHHhhhhC--cEEEEEEECCcCCCccccc
Confidence                    566778999999999999999999999888  9999999999999986653

>PRK07074 short chain dehydrogenase; Provisional

Probab=99.97  E-value=5.5e-29  Score=208.22  Aligned_cols=183  Identities=26%  Similarity=0.290  Sum_probs=159.4

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      |++|||||++|||.+++++|+++|++|++++|+..++++..+.+    .+..+.++++|+++.+++.+.++++.++++++
T Consensus         3 k~ilItGat~~iG~~la~~L~~~g~~v~~~~r~~~~~~~~~~~~----~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   78 (257)
T PRK07074          3 RTALVTGAAGGIGQALARRFLAAGDRVLALDIDAAALAAFADAL----GDARFVPVACDLTDAASLAAALANAAAERGPV   78 (257)
T ss_pred             CEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh----cCCceEEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence            57999999999999999999999999999999987777665554    23468899999999999999999998888899


Q ss_pred             eEEEEcCCCCC--CCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccccCC
Q 025509           81 NILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKIN  158 (251)
Q Consensus        81 d~lv~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~  158 (251)
                      |++|||+|...  +..+.+.++|+..+++|+.+++.+++++++.+.++     +.++||++||..+..            
T Consensus        79 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-----~~~~iv~~sS~~~~~------------  141 (257)
T PRK07074         79 DVLVANAGAARAASLHDTTPASWRADNALNLEAAYLCVEAVLEGMLKR-----SRGAVVNIGSVNGMA------------  141 (257)
T ss_pred             CEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc-----CCeEEEEEcchhhcC------------
Confidence            99999999754  34456788899999999999999999999999775     467999999965432            


Q ss_pred             CCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCccc
Q 025509          159 DPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIR  210 (251)
Q Consensus       159 ~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~  210 (251)
                          ..+...|+.+|++++.++++++.++.++|  |+|+.++||+++|++..
T Consensus       142 ----~~~~~~y~~sK~a~~~~~~~~a~~~~~~g--i~v~~v~pg~v~t~~~~  187 (257)
T PRK07074        142 ----ALGHPAYSAAKAGLIHYTKLLAVEYGRFG--IRANAVAPGTVKTQAWE  187 (257)
T ss_pred             ----CCCCcccHHHHHHHHHHHHHHHHHHhHhC--eEEEEEEeCcCCcchhh
Confidence                22456899999999999999999999999  99999999999999854

>TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase

Probab=99.97  E-value=3.4e-29  Score=234.83  Aligned_cols=185  Identities=26%  Similarity=0.343  Sum_probs=164.0

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      |++|||||++|||+++|++|+++|++|++++|+.+.++...+++.+......+..+++|+++.+++.++++++...+|++
T Consensus       415 kvvLVTGasggIG~aiA~~La~~Ga~Vvi~~r~~~~~~~~~~~l~~~~~~~~~~~v~~Dvtd~~~v~~a~~~i~~~~g~i  494 (676)
T TIGR02632       415 RVAFVTGGAGGIGRETARRLAAEGAHVVLADLNLEAAEAVAAEINGQFGAGRAVALKMDVTDEQAVKAAFADVALAYGGV  494 (676)
T ss_pred             CEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhhcCCCcEEEEECCCCCHHHHHHHHHHHHHhcCCC
Confidence            68999999999999999999999999999999988887777777655444568889999999999999999999999999


Q ss_pred             eEEEEcCCCCC--CCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccccCC
Q 025509           81 NILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKIN  158 (251)
Q Consensus        81 d~lv~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~  158 (251)
                      |+||||||...  +..+.+.++|+..+++|+.+++.+++.+++.|++++    .+++||++||..+..            
T Consensus       495 DilV~nAG~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~al~~m~~~~----~~g~IV~iSS~~a~~------------  558 (676)
T TIGR02632       495 DIVVNNAGIATSSPFEETTLQEWQLNLDILATGYFLVAREAFRQMREQG----LGGNIVFIASKNAVY------------  558 (676)
T ss_pred             cEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC----CCCEEEEEeChhhcC------------
Confidence            99999999753  355677899999999999999999999999998751    257999999987765            


Q ss_pred             CCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccC
Q 025509          159 DPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIAT  206 (251)
Q Consensus       159 ~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t  206 (251)
                         +.++..+|+++|+++++++++++.|+++.|  |+||+|+||.+.+
T Consensus       559 ---~~~~~~aY~aSKaA~~~l~r~lA~el~~~g--IrVn~V~Pg~V~~  601 (676)
T TIGR02632       559 ---AGKNASAYSAAKAAEAHLARCLAAEGGTYG--IRVNTVNPDAVLQ  601 (676)
T ss_pred             ---CCCCCHHHHHHHHHHHHHHHHHHHHhcccC--eEEEEEECCceec
Confidence               566778999999999999999999999999  9999999999965

>PRK06550 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.97  E-value=1.8e-29  Score=208.33  Aligned_cols=172  Identities=31%  Similarity=0.345  Sum_probs=147.1

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      |+++||||++|||++++++|+++|++|++++|+....      .     ..++.++.+|++++      ++++.+.++++
T Consensus         6 k~~lVtGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~------~-----~~~~~~~~~D~~~~------~~~~~~~~~~i   68 (235)
T PRK06550          6 KTVLITGAASGIGLAQARAFLAQGAQVYGVDKQDKPD------L-----SGNFHFLQLDLSDD------LEPLFDWVPSV   68 (235)
T ss_pred             CEEEEcCCCchHHHHHHHHHHHCCCEEEEEeCCcccc------c-----CCcEEEEECChHHH------HHHHHHhhCCC
Confidence            5799999999999999999999999999999975321      0     24688899999886      34444456799


Q ss_pred             eEEEEcCCCC---CCCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccccC
Q 025509           81 NILINNAGIM---GTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKI  157 (251)
Q Consensus        81 d~lv~~ag~~---~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~  157 (251)
                      |++|||||..   .+..+.+.+++++.+++|+.+++.++++++|.+.++     +.++||++||..+..           
T Consensus        69 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-----~~~~iv~~sS~~~~~-----------  132 (235)
T PRK06550         69 DILCNTAGILDDYKPLLDTSLEEWQHIFDTNLTSTFLLTRAYLPQMLER-----KSGIIINMCSIASFV-----------  132 (235)
T ss_pred             CEEEECCCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-----CCcEEEEEcChhhcc-----------
Confidence            9999999964   335567888999999999999999999999999875     468999999987765           


Q ss_pred             CCCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccC
Q 025509          158 NDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  211 (251)
Q Consensus       158 ~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  211 (251)
                          +.++...|+.+|+++++++++++.|+.++|  |+|++|+||+++|++...
T Consensus       133 ----~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g--i~v~~v~pg~v~t~~~~~  180 (235)
T PRK06550        133 ----AGGGGAAYTASKHALAGFTKQLALDYAKDG--IQVFGIAPGAVKTPMTAA  180 (235)
T ss_pred             ----CCCCCcccHHHHHHHHHHHHHHHHHhhhcC--eEEEEEeeCCccCccccc
Confidence                566778999999999999999999999988  999999999999998653

>PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed

Probab=99.97  E-value=1.7e-28  Score=204.09  Aligned_cols=188  Identities=29%  Similarity=0.368  Sum_probs=165.1

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      |++|||||+++||.+++++|+++|++|++++|+..+.....+.+.+.  +.++.++.+|+++.++++++++++..+++++
T Consensus         7 ~~ilItGasg~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~   84 (251)
T PRK12826          7 RVALVTGAARGIGRAIAVRLAADGAEVIVVDICGDDAAATAELVEAA--GGKARARQVDVRDRAALKAAVAAGVEDFGRL   84 (251)
T ss_pred             CEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCeEEEEECCCCCHHHHHHHHHHHHHHhCCC
Confidence            57999999999999999999999999999999987777777666543  3468899999999999999999998888999


Q ss_pred             eEEEEcCCCCCC--CCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCcccc-ccccCCcccccC
Q 025509           81 NILINNAGIMGT--PFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHR-LAYHEGIRFDKI  157 (251)
Q Consensus        81 d~lv~~ag~~~~--~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~-~~~~~~~~~~~~  157 (251)
                      |++|||+|...+  ..+.+.++++..++.|+.+++.+++.+++.+.++     ..++||++||..+. .           
T Consensus        85 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-----~~~~ii~~ss~~~~~~-----------  148 (251)
T PRK12826         85 DILVANAGIFPLTPFAEMDDEQWERVIDVNLTGTFLLTQAALPALIRA-----GGGRIVLTSSVAGPRV-----------  148 (251)
T ss_pred             CEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc-----CCcEEEEEechHhhcc-----------
Confidence            999999996543  4467788999999999999999999999999875     46799999998765 3           


Q ss_pred             CCCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCC
Q 025509          158 NDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRHN  212 (251)
Q Consensus       158 ~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~~  212 (251)
                          +.+....|+.+|++++.++++++.++.+.|  ++++.+.||.+.|++.+..
T Consensus       149 ----~~~~~~~y~~sK~a~~~~~~~~~~~~~~~~--i~~~~i~pg~~~~~~~~~~  197 (251)
T PRK12826        149 ----GYPGLAHYAASKAGLVGFTRALALELAARN--ITVNSVHPGGVDTPMAGNL  197 (251)
T ss_pred             ----CCCCccHHHHHHHHHHHHHHHHHHHHHHcC--eEEEEEeeCCCCcchhhhc
Confidence                556677999999999999999999998888  9999999999999987654

>PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.97  E-value=7e-29  Score=205.88  Aligned_cols=189  Identities=32%  Similarity=0.383  Sum_probs=165.3

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEE-ecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCC
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMG-VRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQ   79 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~-~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~   79 (251)
                      |++|||||+++||.++++.|+++|++|+++ +|+++...+..+.+...  +..+.++.+|+++++++.++++++.+.+++
T Consensus         6 ~~ilI~Gasg~iG~~la~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   83 (247)
T PRK05565          6 KVAIVTGASGGIGRAIAELLAKEGAKVVIAYDINEEAAQELLEEIKEE--GGDAIAVKADVSSEEDVENLVEQIVEKFGK   83 (247)
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhc--CCeEEEEECCCCCHHHHHHHHHHHHHHhCC
Confidence            579999999999999999999999999998 99887777776666542  456899999999999999999999888889


Q ss_pred             eeEEEEcCCCCC--CCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccccC
Q 025509           80 LNILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKI  157 (251)
Q Consensus        80 id~lv~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~  157 (251)
                      +|+||||+|...  +..+.+.++++..+++|+.+++.+++.+.+.+.++     ..+++|++||..+..           
T Consensus        84 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-----~~~~~v~~sS~~~~~-----------  147 (247)
T PRK05565         84 IDILVNNAGISNFGLVTDMTDEEWDRVIDVNLTGVMLLTRYALPYMIKR-----KSGVIVNISSIWGLI-----------  147 (247)
T ss_pred             CCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-----CCcEEEEECCHhhcc-----------
Confidence            999999999753  24466788999999999999999999999999875     467999999987665           


Q ss_pred             CCCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCCc
Q 025509          158 NDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRHNS  213 (251)
Q Consensus       158 ~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~~~  213 (251)
                          +.+....|+.+|++++.++++++.++.+.|  |++++|+||+++|++.+...
T Consensus       148 ----~~~~~~~y~~sK~a~~~~~~~~~~~~~~~g--i~~~~v~pg~v~t~~~~~~~  197 (247)
T PRK05565        148 ----GASCEVLYSASKGAVNAFTKALAKELAPSG--IRVNAVAPGAIDTEMWSSFS  197 (247)
T ss_pred             ----CCCCccHHHHHHHHHHHHHHHHHHHHHHcC--eEEEEEEECCccCccccccC
Confidence                456677899999999999999999998888  99999999999999876543

>PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.97  E-value=1e-28  Score=205.71  Aligned_cols=184  Identities=23%  Similarity=0.260  Sum_probs=155.9

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecC-chhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCC
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRD-IAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQ   79 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~-~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~   79 (251)
                      +++|||||++|||++++++|+++|++|++..|+ .....+....+.+.  +.++.++.+|+++++++.++++++.+.+++
T Consensus         7 ~~vlitGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   84 (252)
T PRK06077          7 KVVVVTGSGRGIGRAIAVRLAKEGSLVVVNAKKRAEEMNETLKMVKEN--GGEGIGVLADVSTREGCETLAKATIDRYGV   84 (252)
T ss_pred             cEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHHc--CCeeEEEEeccCCHHHHHHHHHHHHHHcCC
Confidence            589999999999999999999999999887754 33444444444332  346788999999999999999999998999


Q ss_pred             eeEEEEcCCCCC--CCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccccC
Q 025509           80 LNILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKI  157 (251)
Q Consensus        80 id~lv~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~  157 (251)
                      +|+||||||...  +..+.+.++++..+++|+.+++.+++++.|++.+       .++||++||..+..           
T Consensus        85 ~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~-------~~~iv~~sS~~~~~-----------  146 (252)
T PRK06077         85 ADILVNNAGLGLFSPFLNVDDKLIDKHISTDFKSVIYCSQELAKEMRE-------GGAIVNIASVAGIR-----------  146 (252)
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHhHhCHHHHHHHHHHHHHhhc-------CcEEEEEcchhccC-----------
Confidence            999999999743  3445677788999999999999999999999865       37999999987665           


Q ss_pred             CCCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccC
Q 025509          158 NDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  211 (251)
Q Consensus       158 ~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  211 (251)
                          +.+++..|+++|+++++++++++.|+.+ +  |+++.|.||+++|++...
T Consensus       147 ----~~~~~~~Y~~sK~~~~~~~~~l~~~~~~-~--i~v~~v~Pg~i~t~~~~~  193 (252)
T PRK06077        147 ----PAYGLSIYGAMKAAVINLTKYLALELAP-K--IRVNAIAPGFVKTKLGES  193 (252)
T ss_pred             ----CCCCchHHHHHHHHHHHHHHHHHHHHhc-C--CEEEEEeeCCccChHHHh
Confidence                6677889999999999999999999987 7  999999999999998543

>PRK07326 short chain dehydrogenase; Provisional

Probab=99.97  E-value=1.6e-28  Score=202.82  Aligned_cols=185  Identities=26%  Similarity=0.353  Sum_probs=162.0

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      ++++||||+|+||++++++|+++|++|++++|++.++.+..+++.+.   ..+.++++|+++.+++.++++++.+.++++
T Consensus         7 ~~ilItGatg~iG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~---~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   83 (237)
T PRK07326          7 KVALITGGSKGIGFAIAEALLAEGYKVAITARDQKELEEAAAELNNK---GNVLGLAADVRDEADVQRAVDAIVAAFGGL   83 (237)
T ss_pred             CEEEEECCCCcHHHHHHHHHHHCCCEEEEeeCCHHHHHHHHHHHhcc---CcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            47999999999999999999999999999999988877777666442   468899999999999999999998888899


Q ss_pred             eEEEEcCCCCC--CCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccccCC
Q 025509           81 NILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKIN  158 (251)
Q Consensus        81 d~lv~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~  158 (251)
                      |+||||+|...  ++.+.+.+++++.+++|+.+++.+++++++.+..      ..++||++||..+..            
T Consensus        84 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~------~~~~iv~~ss~~~~~------------  145 (237)
T PRK07326         84 DVLIANAGVGHFAPVEELTPEEWRLVIDTNLTGAFYTIKAAVPALKR------GGGYIINISSLAGTN------------  145 (237)
T ss_pred             CEEEECCCCCCCCchhhCCHHHHHHHHhhccHHHHHHHHHHHHHHHH------CCeEEEEECChhhcc------------
Confidence            99999999653  3456788899999999999999999999999843      357999999976654            


Q ss_pred             CCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccC
Q 025509          159 DPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  211 (251)
Q Consensus       159 ~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  211 (251)
                         +.+....|+.+|+++++++++++.++.+.|  +++++|+||++.|++...
T Consensus       146 ---~~~~~~~y~~sk~a~~~~~~~~~~~~~~~g--i~v~~v~pg~~~t~~~~~  193 (237)
T PRK07326        146 ---FFAGGAAYNASKFGLVGFSEAAMLDLRQYG--IKVSTIMPGSVATHFNGH  193 (237)
T ss_pred             ---CCCCCchHHHHHHHHHHHHHHHHHHhcccC--cEEEEEeeccccCccccc
Confidence               455677899999999999999999999888  999999999999987654

>PRK09009 C factor cell-cell signaling protein; Provisional

Probab=99.97  E-value=4.7e-29  Score=205.94  Aligned_cols=180  Identities=23%  Similarity=0.320  Sum_probs=144.5

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcC--CEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCC
Q 025509            1 MDIVITGATSGIGTETARVLALRG--VHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHH   78 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G--~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g   78 (251)
                      |+++||||++|||+++|++|+++|  ..|++..|+...  +        ....++.++++|+++.++++++.+    .++
T Consensus         1 ~~vlItGas~gIG~~ia~~l~~~~~~~~v~~~~~~~~~--~--------~~~~~~~~~~~Dls~~~~~~~~~~----~~~   66 (235)
T PRK09009          1 MNILIVGGSGGIGKAMVKQLLERYPDATVHATYRHHKP--D--------FQHDNVQWHALDVTDEAEIKQLSE----QFT   66 (235)
T ss_pred             CEEEEECCCChHHHHHHHHHHHhCCCCEEEEEccCCcc--c--------cccCceEEEEecCCCHHHHHHHHH----hcC
Confidence            689999999999999999999985  567666665432  1        114578899999999999887543    457


Q ss_pred             CeeEEEEcCCCCC--------CCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccC
Q 025509           79 QLNILINNAGIMG--------TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHE  150 (251)
Q Consensus        79 ~id~lv~~ag~~~--------~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~  150 (251)
                      ++|+||||||...        ++.+.+.+.|+..+++|+.+++.+++.++|.|.++     +.++++++||..+...   
T Consensus        67 ~id~li~~aG~~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~-----~~~~i~~iss~~~~~~---  138 (235)
T PRK09009         67 QLDWLINCVGMLHTQDKGPEKSLQALDADFFLQNITLNTLPSLLLAKHFTPKLKQS-----ESAKFAVISAKVGSIS---  138 (235)
T ss_pred             CCCEEEECCccccccccCcccccccCCHHHHHHHHHHHhHHHHHHHHHHHhhcccc-----CCceEEEEeecccccc---
Confidence            8999999999753        13456778899999999999999999999999764     3579999998654321   


Q ss_pred             CcccccCCCCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccC
Q 025509          151 GIRFDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  211 (251)
Q Consensus       151 ~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  211 (251)
                               ..+.+++..|+++|+++++|+++|+.|+.+...+|+|++|+||+++|++...
T Consensus       139 ---------~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~~~~i~v~~v~PG~v~t~~~~~  190 (235)
T PRK09009        139 ---------DNRLGGWYSYRASKAALNMFLKTLSIEWQRSLKHGVVLALHPGTTDTALSKP  190 (235)
T ss_pred             ---------cCCCCCcchhhhhHHHHHHHHHHHHHHhhcccCCeEEEEEcccceecCCCcc
Confidence                     1134567799999999999999999999874233999999999999999764

>PRK07577 short chain dehydrogenase; Provisional

Probab=99.97  E-value=8.7e-29  Score=204.05  Aligned_cols=174  Identities=28%  Similarity=0.354  Sum_probs=150.6

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      |++|||||++|||++++++|+++|++|++++|+...          ..   ...++.+|+++.++++++++++.+.+ ++
T Consensus         4 k~vlItG~s~~iG~~ia~~l~~~G~~v~~~~r~~~~----------~~---~~~~~~~D~~~~~~~~~~~~~~~~~~-~~   69 (234)
T PRK07577          4 RTVLVTGATKGIGLALSLRLANLGHQVIGIARSAID----------DF---PGELFACDLADIEQTAATLAQINEIH-PV   69 (234)
T ss_pred             CEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCccc----------cc---CceEEEeeCCCHHHHHHHHHHHHHhC-CC
Confidence            579999999999999999999999999999997643          01   12568899999999999999988776 68


Q ss_pred             eEEEEcCCCCC--CCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccccCC
Q 025509           81 NILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKIN  158 (251)
Q Consensus        81 d~lv~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~  158 (251)
                      |++|||+|...  +..+.+.+++++.+++|+.+++.++++++|.+++.     +.++||++||... .            
T Consensus        70 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-----~~~~iv~~sS~~~-~------------  131 (234)
T PRK07577         70 DAIVNNVGIALPQPLGKIDLAALQDVYDLNVRAAVQVTQAFLEGMKLR-----EQGRIVNICSRAI-F------------  131 (234)
T ss_pred             cEEEECCCCCCCCChHHCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-----CCcEEEEEccccc-c------------
Confidence            99999999753  34456788999999999999999999999999875     4689999999753 2            


Q ss_pred             CCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccC
Q 025509          159 DPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  211 (251)
Q Consensus       159 ~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  211 (251)
                         +.+...+|+.+|+++++|+++++.|+.+.|  |++++|+||++.|++...
T Consensus       132 ---~~~~~~~Y~~sK~a~~~~~~~~a~e~~~~g--i~v~~i~pg~~~t~~~~~  179 (234)
T PRK07577        132 ---GALDRTSYSAAKSALVGCTRTWALELAEYG--ITVNAVAPGPIETELFRQ  179 (234)
T ss_pred             ---CCCCchHHHHHHHHHHHHHHHHHHHHHhhC--cEEEEEecCcccCccccc
Confidence               345667999999999999999999999888  999999999999998653

>PRK07023 short chain dehydrogenase; Provisional

Probab=99.97  E-value=3.2e-29  Score=208.02  Aligned_cols=180  Identities=25%  Similarity=0.349  Sum_probs=152.2

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHH-HHhcC--
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASE-YNIQH--   77 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~-~~~~~--   77 (251)
                      +++|||||++|||+++|++|+++|++|++++|+..+.  .    .+. .+.++.++++|+++.+++++++++ +.+.+  
T Consensus         2 ~~vlItGasggiG~~ia~~l~~~G~~v~~~~r~~~~~--~----~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   74 (243)
T PRK07023          2 VRAIVTGHSRGLGAALAEQLLQPGIAVLGVARSRHPS--L----AAA-AGERLAEVELDLSDAAAAAAWLAGDLLAAFVD   74 (243)
T ss_pred             ceEEEecCCcchHHHHHHHHHhCCCEEEEEecCcchh--h----hhc-cCCeEEEEEeccCCHHHHHHHHHHHHHHHhcc
Confidence            5799999999999999999999999999999976531  1    111 145788999999999999998776 44433  


Q ss_pred             -CCeeEEEEcCCCCC---CCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcc
Q 025509           78 -HQLNILINNAGIMG---TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIR  153 (251)
Q Consensus        78 -g~id~lv~~ag~~~---~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~  153 (251)
                       +++|++|||||...   +..+.+.+++++.+++|+.+++.+++.+++.+.++     ..++||++||..+..       
T Consensus        75 ~~~~~~~v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-----~~~~iv~isS~~~~~-------  142 (243)
T PRK07023         75 GASRVLLINNAGTVEPIGPLATLDAAAIARAVGLNVAAPLMLTAALAQAASDA-----AERRILHISSGAARN-------  142 (243)
T ss_pred             CCCceEEEEcCcccCCCCccccCCHHHHHHHeeeeehHHHHHHHHHHHHhhcc-----CCCEEEEEeChhhcC-------
Confidence             47999999999753   34566889999999999999999999999998764     468999999987665       


Q ss_pred             cccCCCCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCccc
Q 025509          154 FDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIR  210 (251)
Q Consensus       154 ~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~  210 (251)
                              +.+++..|+++|+++++++++++.+ .+.|  |+++.|+||+++|++..
T Consensus       143 --------~~~~~~~Y~~sK~a~~~~~~~~~~~-~~~~--i~v~~v~pg~~~t~~~~  188 (243)
T PRK07023        143 --------AYAGWSVYCATKAALDHHARAVALD-ANRA--LRIVSLAPGVVDTGMQA  188 (243)
T ss_pred             --------CCCCchHHHHHHHHHHHHHHHHHhc-CCCC--cEEEEecCCccccHHHH
Confidence                    6677889999999999999999999 6777  99999999999999854

>KOG1199 consensus Short-chain alcohol dehydrogenase/3-hydroxyacyl-CoA dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.97  E-value=7.7e-31  Score=198.99  Aligned_cols=190  Identities=29%  Similarity=0.343  Sum_probs=171.0

Q ss_pred             EEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCee
Q 025509            2 DIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQLN   81 (251)
Q Consensus         2 ~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~id   81 (251)
                      +.|||||.+|+|++.|++|+.+|+.|++.+..+.+..+..+++     +.++.+.++|+++++++...+...+.+||++|
T Consensus        11 valvtggasglg~ataerlakqgasv~lldlp~skg~~vakel-----g~~~vf~padvtsekdv~aala~ak~kfgrld   85 (260)
T KOG1199|consen   11 VALVTGGASGLGKATAERLAKQGASVALLDLPQSKGADVAKEL-----GGKVVFTPADVTSEKDVRAALAKAKAKFGRLD   85 (260)
T ss_pred             eEEeecCcccccHHHHHHHHhcCceEEEEeCCcccchHHHHHh-----CCceEEeccccCcHHHHHHHHHHHHhhcccee
Confidence            5799999999999999999999999999999888999988888     88999999999999999999999999999999


Q ss_pred             EEEEcCCCCC--------CCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhc-cCCCCceEEEEcCccccccccCCc
Q 025509           82 ILINNAGIMG--------TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTAR-KSGGEGRIINVSSEGHRLAYHEGI  152 (251)
Q Consensus        82 ~lv~~ag~~~--------~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~-~~~~~g~iv~vsS~~~~~~~~~~~  152 (251)
                      .+|||||+.-        .-...+.|++++.+++|++|++++++.-.-.|-+..+ +.++.|.||++.|.++..      
T Consensus        86 ~~vncagia~a~ktyn~~k~~~h~ledfqrvidvn~~gtfnvirl~aglmg~nepdq~gqrgviintasvaafd------  159 (260)
T KOG1199|consen   86 ALVNCAGIAYAFKTYNVQKKKHHDLEDFQRVIDVNVLGTFNVIRLGAGLMGENEPDQNGQRGVIINTASVAAFD------  159 (260)
T ss_pred             eeeeccceeeeeeeeeecccccccHHHhhheeeeeeeeeeeeeeehhhhhcCCCCCCCCcceEEEeeceeeeec------
Confidence            9999999641        1234577899999999999999999998888877643 445689999999988775      


Q ss_pred             ccccCCCCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCCc
Q 025509          153 RFDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRHNS  213 (251)
Q Consensus       153 ~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~~~  213 (251)
                               +..++++|++||.++.+++--++++++..|  ||++.|.||..+||++...+
T Consensus       160 ---------gq~gqaaysaskgaivgmtlpiardla~~g--ir~~tiapglf~tpllsslp  209 (260)
T KOG1199|consen  160 ---------GQTGQAAYSASKGAIVGMTLPIARDLAGDG--IRFNTIAPGLFDTPLLSSLP  209 (260)
T ss_pred             ---------CccchhhhhcccCceEeeechhhhhcccCc--eEEEeecccccCChhhhhhh
Confidence                     677889999999999999999999999999  99999999999999987644

>PRK09291 short chain dehydrogenase; Provisional

Probab=99.97  E-value=1.7e-28  Score=205.00  Aligned_cols=180  Identities=28%  Similarity=0.338  Sum_probs=154.3

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      |++|||||++|||++++++|+++|++|++++|++....+..+...+.  +..+.++.+|+++.+++.+.++      +++
T Consensus         3 ~~vlVtGasg~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~------~~i   74 (257)
T PRK09291          3 KTILITGAGSGFGREVALRLARKGHNVIAGVQIAPQVTALRAEAARR--GLALRVEKLDLTDAIDRAQAAE------WDV   74 (257)
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCcceEEEeeCCCHHHHHHHhc------CCC
Confidence            47999999999999999999999999999999887766665554433  3468899999999998877643      379


Q ss_pred             eEEEEcCCCCC--CCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccccCC
Q 025509           81 NILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKIN  158 (251)
Q Consensus        81 d~lv~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~  158 (251)
                      |+||||||...  +..+.+.++++..+++|+.+++.+++.+++.+.++     +.++||++||..+..            
T Consensus        75 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-----~~~~iv~~SS~~~~~------------  137 (257)
T PRK09291         75 DVLLNNAGIGEAGAVVDIPVELVRELFETNVFGPLELTQGFVRKMVAR-----GKGKVVFTSSMAGLI------------  137 (257)
T ss_pred             CEEEECCCcCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-----CCceEEEEcChhhcc------------
Confidence            99999999753  35567888999999999999999999999999875     357999999987655            


Q ss_pred             CCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCccc
Q 025509          159 DPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIR  210 (251)
Q Consensus       159 ~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~  210 (251)
                         +.++...|+++|+++++++++++.++.+.|  |+++.|+||++.|++..
T Consensus       138 ---~~~~~~~Y~~sK~a~~~~~~~l~~~~~~~g--i~~~~v~pg~~~t~~~~  184 (257)
T PRK09291        138 ---TGPFTGAYCASKHALEAIAEAMHAELKPFG--IQVATVNPGPYLTGFND  184 (257)
T ss_pred             ---CCCCcchhHHHHHHHHHHHHHHHHHHHhcC--cEEEEEecCcccccchh
Confidence               455677999999999999999999999888  99999999999998754

>TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase

Probab=99.96  E-value=3.5e-28  Score=202.74  Aligned_cols=186  Identities=27%  Similarity=0.309  Sum_probs=161.9

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      |++|||||+++||++++++|+++|++|++++|+....+...+.+...  +.++.++.+|+++.++++.+++++.+.++++
T Consensus         2 ~~vlItGa~g~lG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   79 (255)
T TIGR01963         2 KTALVTGAASGIGLAIALALAAAGANVVVNDLGEAGAEAAAKVATDA--GGSVIYLVADVTKEDEIADMIAAAAAEFGGL   79 (255)
T ss_pred             CEEEEcCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCceEEEECCCCCHHHHHHHHHHHHHhcCCC
Confidence            58999999999999999999999999999999987777766655432  4568899999999999999999998888899


Q ss_pred             eEEEEcCCCCCC--CCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccccCC
Q 025509           81 NILINNAGIMGT--PFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKIN  158 (251)
Q Consensus        81 d~lv~~ag~~~~--~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~  158 (251)
                      |++|||||....  ..+.+.++++.++++|+.+++.+++.+++.+.+.     ..+++|++||..+..            
T Consensus        80 d~vi~~a~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~-----~~~~~v~~ss~~~~~------------  142 (255)
T TIGR01963        80 DILVNNAGIQHVAPIEEFPPEDWDRIIAIMLTSAFHTIRAALPHMKKQ-----GWGRIINIASAHGLV------------  142 (255)
T ss_pred             CEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-----CCeEEEEEcchhhcC------------
Confidence            999999997532  4456778899999999999999999999999775     357999999976654            


Q ss_pred             CCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCccc
Q 025509          159 DPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIR  210 (251)
Q Consensus       159 ~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~  210 (251)
                         +.+.+..|+.+|++++.++++++.++.+.+  |+++.++||++.|++..
T Consensus       143 ---~~~~~~~y~~sk~a~~~~~~~~~~~~~~~~--i~v~~i~pg~v~~~~~~  189 (255)
T TIGR01963       143 ---ASPFKSAYVAAKHGLIGLTKVLALEVAAHG--ITVNAICPGYVRTPLVE  189 (255)
T ss_pred             ---CCCCCchhHHHHHHHHHHHHHHHHHhhhcC--eEEEEEecCccccHHHH
Confidence               556778999999999999999999998888  99999999999998753

This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species.

>PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=99.96  E-value=7.5e-28  Score=199.57  Aligned_cols=188  Identities=33%  Similarity=0.405  Sum_probs=160.3

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchh-HHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCC
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAA-GKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQ   79 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~-~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~   79 (251)
                      |++|||||+++||.++++.|+++|++|+++.|+... .+...+++...  +.++.++.+|+++.+++.++++++.+.+++
T Consensus         6 ~~vlItG~sg~iG~~l~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   83 (248)
T PRK05557          6 KVALVTGASRGIGRAIAERLAAQGANVVINYASSEAGAEALVAEIGAL--GGKALAVQGDVSDAESVERAVDEAKAEFGG   83 (248)
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHhc--CCceEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            579999999999999999999999999888776543 44444444332  457889999999999999999999888889


Q ss_pred             eeEEEEcCCCCCC--CCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccccC
Q 025509           80 LNILINNAGIMGT--PFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKI  157 (251)
Q Consensus        80 id~lv~~ag~~~~--~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~  157 (251)
                      +|++|||||....  ..+.+.+.+++.+++|+.+++.+++++.+.+.++     +.++++++||..+..           
T Consensus        84 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-----~~~~~v~iss~~~~~-----------  147 (248)
T PRK05557         84 VDILVNNAGITRDNLLMRMKEEDWDRVIDTNLTGVFNLTKAVARPMMKQ-----RSGRIINISSVVGLM-----------  147 (248)
T ss_pred             CCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-----CCeEEEEEcccccCc-----------
Confidence            9999999997542  4456778899999999999999999999999774     357999999986655           


Q ss_pred             CCCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCC
Q 025509          158 NDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRHN  212 (251)
Q Consensus       158 ~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~~  212 (251)
                          +.++...|+.+|++++.+++.++.++.+.|  +++++++||++.|++....
T Consensus       148 ----~~~~~~~y~~sk~a~~~~~~~~a~~~~~~~--i~~~~v~pg~~~~~~~~~~  196 (248)
T PRK05557        148 ----GNPGQANYAASKAGVIGFTKSLARELASRG--ITVNAVAPGFIETDMTDAL  196 (248)
T ss_pred             ----CCCCCchhHHHHHHHHHHHHHHHHHhhhhC--eEEEEEecCccCCcccccc
Confidence                556778999999999999999999998888  9999999999999887653

>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.96  E-value=1.8e-28  Score=221.03  Aligned_cols=185  Identities=31%  Similarity=0.367  Sum_probs=156.4

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      |++|||||++|||+++|++|+++|++|+++++.... ++ .+++.+..   ...++.+|+++.++++++++.+.+.++++
T Consensus       211 ~~vlItGasggIG~~la~~l~~~Ga~vi~~~~~~~~-~~-l~~~~~~~---~~~~~~~Dv~~~~~~~~~~~~~~~~~g~i  285 (450)
T PRK08261        211 KVALVTGAARGIGAAIAEVLARDGAHVVCLDVPAAG-EA-LAAVANRV---GGTALALDITAPDAPARIAEHLAERHGGL  285 (450)
T ss_pred             CEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCccH-HH-HHHHHHHc---CCeEEEEeCCCHHHHHHHHHHHHHhCCCC
Confidence            579999999999999999999999999999884321 11 12222222   24578899999999999999999889999


Q ss_pred             eEEEEcCCCCC--CCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccccCC
Q 025509           81 NILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKIN  158 (251)
Q Consensus        81 d~lv~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~  158 (251)
                      |+||||||+..  ++.+.+.++|+..+++|+.+++.+.+++.+.+..+     ..++||++||.++..            
T Consensus       286 d~vi~~AG~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~-----~~g~iv~~SS~~~~~------------  348 (450)
T PRK08261        286 DIVVHNAGITRDKTLANMDEARWDSVLAVNLLAPLRITEALLAAGALG-----DGGRIVGVSSISGIA------------  348 (450)
T ss_pred             CEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhhc-----CCCEEEEECChhhcC------------
Confidence            99999999764  35567889999999999999999999999975543     368999999988765            


Q ss_pred             CCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCC
Q 025509          159 DPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRHN  212 (251)
Q Consensus       159 ~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~~  212 (251)
                         +.+++..|+++|+++++|+++++.++.+.|  |++|+|+||+++|++....
T Consensus       349 ---g~~~~~~Y~asKaal~~~~~~la~el~~~g--i~v~~v~PG~i~t~~~~~~  397 (450)
T PRK08261        349 ---GNRGQTNYAASKAGVIGLVQALAPLLAERG--ITINAVAPGFIETQMTAAI  397 (450)
T ss_pred             ---CCCCChHHHHHHHHHHHHHHHHHHHHhhhC--cEEEEEEeCcCcchhhhcc
Confidence               566778999999999999999999999989  9999999999999987643

>PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=99.96  E-value=9.3e-28  Score=198.77  Aligned_cols=187  Identities=30%  Similarity=0.376  Sum_probs=163.3

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      |++|||||+++||.+++++|+++|++|++++|++.+.+.....+.+.  +.++.++.+|+++++++..+++++...++++
T Consensus         6 ~~ilItGasg~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   83 (246)
T PRK05653          6 KTALVTGASRGIGRAIALRLAADGAKVVIYDSNEEAAEALAAELRAA--GGEARVLVFDVSDEAAVRALIEAAVEAFGAL   83 (246)
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhc--CCceEEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence            57999999999999999999999999999999988877766666543  4578899999999999999999988888899


Q ss_pred             eEEEEcCCCCC--CCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccccCC
Q 025509           81 NILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKIN  158 (251)
Q Consensus        81 d~lv~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~  158 (251)
                      |++||++|...  +..+.+.++++..++.|+.+++.+++++.+++.+.     +.++||++||..+..            
T Consensus        84 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~-----~~~~ii~~ss~~~~~------------  146 (246)
T PRK05653         84 DILVNNAGITRDALLPRMSEEDWDRVIDVNLTGTFNVVRAALPPMIKA-----RYGRIVNISSVSGVT------------  146 (246)
T ss_pred             CEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-----CCcEEEEECcHHhcc------------
Confidence            99999999653  24566788899999999999999999999999774     357999999976654            


Q ss_pred             CCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccC
Q 025509          159 DPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  211 (251)
Q Consensus       159 ~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  211 (251)
                         +.+.+..|+.+|++++.++++++.++.+.|  ++++.|+||.+.+++...
T Consensus       147 ---~~~~~~~y~~sk~~~~~~~~~l~~~~~~~~--i~~~~i~pg~~~~~~~~~  194 (246)
T PRK05653        147 ---GNPGQTNYSAAKAGVIGFTKALALELASRG--ITVNAVAPGFIDTDMTEG  194 (246)
T ss_pred             ---CCCCCcHhHhHHHHHHHHHHHHHHHHhhcC--eEEEEEEeCCcCCcchhh
Confidence               455677899999999999999999998888  999999999999998753

>PRK12828 short chain dehydrogenase; Provisional

Probab=99.96  E-value=7e-28  Score=198.80  Aligned_cols=184  Identities=27%  Similarity=0.287  Sum_probs=160.4

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      |++|||||+++||.+++++|+++|++|++++|++.+..+..+++..    ..+.++.+|+++.++++++++++.+.++++
T Consensus         8 k~vlItGatg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~----~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   83 (239)
T PRK12828          8 KVVAITGGFGGLGRATAAWLAARGARVALIGRGAAPLSQTLPGVPA----DALRIGGIDLVDPQAARRAVDEVNRQFGRL   83 (239)
T ss_pred             CEEEEECCCCcHhHHHHHHHHHCCCeEEEEeCChHhHHHHHHHHhh----cCceEEEeecCCHHHHHHHHHHHHHHhCCc
Confidence            5899999999999999999999999999999998776666555432    246778899999999999999999999999


Q ss_pred             eEEEEcCCCCCC--CCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccccCC
Q 025509           81 NILINNAGIMGT--PFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKIN  158 (251)
Q Consensus        81 d~lv~~ag~~~~--~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~  158 (251)
                      |+|||++|....  ..+.+.+++++.+++|+.+++.+++++.+++.++     +.++||++||..+..            
T Consensus        84 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-----~~~~iv~~sS~~~~~------------  146 (239)
T PRK12828         84 DALVNIAGAFVWGTIADGDADTWDRMYGVNVKTTLNASKAALPALTAS-----GGGRIVNIGAGAALK------------  146 (239)
T ss_pred             CEEEECCcccCcCChhhCCHHHHHHHHHhhchhHHHHHHHHHHHHHhc-----CCCEEEEECchHhcc------------
Confidence            999999996532  4456788899999999999999999999999875     468999999987665            


Q ss_pred             CCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCccc
Q 025509          159 DPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIR  210 (251)
Q Consensus       159 ~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~  210 (251)
                         +.+.+..|+.+|++++.++++++.++.+.|  |+++.+.||++.|++..
T Consensus       147 ---~~~~~~~y~~sk~a~~~~~~~~a~~~~~~~--i~~~~i~pg~v~~~~~~  193 (239)
T PRK12828        147 ---AGPGMGAYAAAKAGVARLTEALAAELLDRG--ITVNAVLPSIIDTPPNR  193 (239)
T ss_pred             ---CCCCcchhHHHHHHHHHHHHHHHHHhhhcC--eEEEEEecCcccCcchh
Confidence               556778999999999999999999998888  99999999999998654

>PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.96  E-value=1.3e-27  Score=198.04  Aligned_cols=188  Identities=29%  Similarity=0.397  Sum_probs=159.6

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchh-HHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCC
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAA-GKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQ   79 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~-~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~   79 (251)
                      |++|||||+++||++++++|+++|++|+++.|+... .+...+.+.+.  +.++.++.+|+++.+++.++++++.+.+++
T Consensus         7 ~~vlItGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~   84 (249)
T PRK12825          7 RVALVTGAARGLGRAIALRLARAGADVVVHYRSDEEAAEELVEAVEAL--GRRAQAVQADVTDKAALEAAVAAAVERFGR   84 (249)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHHhc--CCceEEEECCcCCHHHHHHHHHHHHHHcCC
Confidence            579999999999999999999999998876665443 33344434332  456889999999999999999999888889


Q ss_pred             eeEEEEcCCCCCC--CCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccccC
Q 025509           80 LNILINNAGIMGT--PFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKI  157 (251)
Q Consensus        80 id~lv~~ag~~~~--~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~  157 (251)
                      +|++|||||...+  ..+.+.++++..+++|+.+++.+++.+.+++.+.     +.+++|++||..+..           
T Consensus        85 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-----~~~~~i~~SS~~~~~-----------  148 (249)
T PRK12825         85 IDILVNNAGIFEDKPLADMSDDEWDEVIDVNLSGVFHLLRAVVPPMRKQ-----RGGRIVNISSVAGLP-----------  148 (249)
T ss_pred             CCEEEECCccCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-----CCCEEEEECccccCC-----------
Confidence            9999999996533  4466788999999999999999999999999875     467999999987664           


Q ss_pred             CCCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCC
Q 025509          158 NDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRHN  212 (251)
Q Consensus       158 ~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~~  212 (251)
                          +.+.+..|+.+|++++++++.++.++.+.|  ++++.++||.+.|++....
T Consensus       149 ----~~~~~~~y~~sK~~~~~~~~~~~~~~~~~~--i~~~~i~pg~~~~~~~~~~  197 (249)
T PRK12825        149 ----GWPGRSNYAAAKAGLVGLTKALARELAEYG--ITVNMVAPGDIDTDMKEAT  197 (249)
T ss_pred             ----CCCCchHHHHHHHHHHHHHHHHHHHHhhcC--eEEEEEEECCccCCccccc
Confidence                556678999999999999999999998888  9999999999999987653

>PRK09135 pteridine reductase; Provisional

Probab=99.96  E-value=1.5e-27  Score=198.18  Aligned_cols=185  Identities=22%  Similarity=0.273  Sum_probs=154.9

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCc-hhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCC
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDI-AAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQ   79 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~-~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~   79 (251)
                      +++|||||+++||++++++|+++|++|++++|+. +..+.....+.+.. +..+.++.+|+++.+++.++++++.+.+++
T Consensus         7 ~~vlItGa~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   85 (249)
T PRK09135          7 KVALITGGARRIGAAIARTLHAAGYRVAIHYHRSAAEADALAAELNALR-PGSAAALQADLLDPDALPELVAACVAAFGR   85 (249)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhhc-CCceEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            4799999999999999999999999999999863 44455444444332 345888999999999999999999988999


Q ss_pred             eeEEEEcCCCCC--CCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccccC
Q 025509           80 LNILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKI  157 (251)
Q Consensus        80 id~lv~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~  157 (251)
                      +|+||||||...  +..+.+.++++..+++|+.+++.+++++.|.+.++      .+.+++++|..+..           
T Consensus        86 ~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~------~~~~~~~~~~~~~~-----------  148 (249)
T PRK09135         86 LDALVNNASSFYPTPLGSITEAQWDDLFASNLKAPFFLSQAAAPQLRKQ------RGAIVNITDIHAER-----------  148 (249)
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHHHhchhHHHHHHHHHHHHhhC------CeEEEEEeChhhcC-----------
Confidence            999999999643  24456678899999999999999999999998763      57888887744332           


Q ss_pred             CCCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCccc
Q 025509          158 NDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIR  210 (251)
Q Consensus       158 ~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~  210 (251)
                          +.++...|+.+|++++.++++++.++.+ +  +++++|.||++.||+..
T Consensus       149 ----~~~~~~~Y~~sK~~~~~~~~~l~~~~~~-~--i~~~~v~pg~~~~~~~~  194 (249)
T PRK09135        149 ----PLKGYPVYCAAKAALEMLTRSLALELAP-E--VRVNAVAPGAILWPEDG  194 (249)
T ss_pred             ----CCCCchhHHHHHHHHHHHHHHHHHHHCC-C--CeEEEEEeccccCcccc
Confidence                5667789999999999999999999965 5  99999999999999864

>PRK12829 short chain dehydrogenase; Provisional

Probab=99.96  E-value=9.3e-28  Score=201.26  Aligned_cols=186  Identities=30%  Similarity=0.381  Sum_probs=158.8

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      |++|||||+++||++++++|+++|++|++++|+....++..+...    +.++.++.+|+++++++.++++++.+.++++
T Consensus        12 ~~vlItGa~g~iG~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~~~----~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   87 (264)
T PRK12829         12 LRVLVTGGASGIGRAIAEAFAEAGARVHVCDVSEAALAATAARLP----GAKVTATVADVADPAQVERVFDTAVERFGGL   87 (264)
T ss_pred             CEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHh----cCceEEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence            579999999999999999999999999999998776665544332    2357889999999999999999998888999


Q ss_pred             eEEEEcCCCCCC---CCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccccC
Q 025509           81 NILINNAGIMGT---PFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKI  157 (251)
Q Consensus        81 d~lv~~ag~~~~---~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~  157 (251)
                      |+||||||...+   ....+.+++++.+++|+.+++.+++.+++.+....    ..++|+++||.++..           
T Consensus        88 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~----~~~~vv~~ss~~~~~-----------  152 (264)
T PRK12829         88 DVLVNNAGIAGPTGGIDEITPEQWEQTLAVNLNGQFYFARAAVPLLKASG----HGGVIIALSSVAGRL-----------  152 (264)
T ss_pred             CEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC----CCeEEEEeccccccc-----------
Confidence            999999997622   34567889999999999999999999999887641    126799999876654           


Q ss_pred             CCCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccC
Q 025509          158 NDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  211 (251)
Q Consensus       158 ~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  211 (251)
                          +.+.+..|+.+|++++.++++++.++.+.+  +++++|.||++.|++...
T Consensus       153 ----~~~~~~~y~~~K~a~~~~~~~l~~~~~~~~--i~~~~l~pg~v~~~~~~~  200 (264)
T PRK12829        153 ----GYPGRTPYAASKWAVVGLVKSLAIELGPLG--IRVNAILPGIVRGPRMRR  200 (264)
T ss_pred             ----CCCCCchhHHHHHHHHHHHHHHHHHHhhcC--eEEEEEecCCcCChHHHH
Confidence                566777899999999999999999998888  999999999999998653

>PRK07060 short chain dehydrogenase; Provisional

Probab=99.96  E-value=7.7e-28  Score=199.62  Aligned_cols=178  Identities=30%  Similarity=0.391  Sum_probs=152.2

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      |+++||||++|||+++++.|+++|++|++++|++++.++..+..       .+.++.+|+++.+++.++++.    .+++
T Consensus        10 ~~~lItGa~g~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~-------~~~~~~~D~~~~~~v~~~~~~----~~~~   78 (245)
T PRK07060         10 KSVLVTGASSGIGRACAVALAQRGARVVAAARNAAALDRLAGET-------GCEPLRLDVGDDAAIRAALAA----AGAF   78 (245)
T ss_pred             CEEEEeCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-------CCeEEEecCCCHHHHHHHHHH----hCCC
Confidence            57999999999999999999999999999999877665544322       356788999999988887775    4689


Q ss_pred             eEEEEcCCCCC--CCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccccCC
Q 025509           81 NILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKIN  158 (251)
Q Consensus        81 d~lv~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~  158 (251)
                      |++|||||...  +..+.+.+++++.+++|+.+++.+++++++.++++    +..++||++||..+..            
T Consensus        79 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~----~~~~~iv~~sS~~~~~------------  142 (245)
T PRK07060         79 DGLVNCAGIASLESALDMTAEGFDRVMAVNARGAALVARHVARAMIAA----GRGGSIVNVSSQAALV------------  142 (245)
T ss_pred             CEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc----CCCcEEEEEccHHHcC------------
Confidence            99999999753  24556788999999999999999999999998764    1247999999987765            


Q ss_pred             CCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCccc
Q 025509          159 DPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIR  210 (251)
Q Consensus       159 ~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~  210 (251)
                         +.+.+..|+.+|++++.++++++.++.+.|  |++++++||++.|++.+
T Consensus       143 ---~~~~~~~y~~sK~a~~~~~~~~a~~~~~~~--i~v~~v~pg~v~~~~~~  189 (245)
T PRK07060        143 ---GLPDHLAYCASKAALDAITRVLCVELGPHG--IRVNSVNPTVTLTPMAA  189 (245)
T ss_pred             ---CCCCCcHhHHHHHHHHHHHHHHHHHHhhhC--eEEEEEeeCCCCCchhh
Confidence               566778999999999999999999999888  99999999999999865

>PRK08264 short chain dehydrogenase; Validated

Probab=99.96  E-value=8e-28  Score=198.87  Aligned_cols=176  Identities=29%  Similarity=0.410  Sum_probs=153.2

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCC-EEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCC
Q 025509            1 MDIVITGATSGIGTETARVLALRGV-HVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQ   79 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~   79 (251)
                      |++|||||+++||+++|++|+++|+ +|++++|+.++.++         .+..+.++.+|+++.++++++++.    .++
T Consensus         7 ~~vlItGgsg~iG~~la~~l~~~G~~~V~~~~r~~~~~~~---------~~~~~~~~~~D~~~~~~~~~~~~~----~~~   73 (238)
T PRK08264          7 KVVLVTGANRGIGRAFVEQLLARGAAKVYAAARDPESVTD---------LGPRVVPLQLDVTDPASVAAAAEA----ASD   73 (238)
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCcccEEEEecChhhhhh---------cCCceEEEEecCCCHHHHHHHHHh----cCC
Confidence            4799999999999999999999999 99999998765443         145789999999999999887775    368


Q ss_pred             eeEEEEcCCCC---CCCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCccccc
Q 025509           80 LNILINNAGIM---GTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDK  156 (251)
Q Consensus        80 id~lv~~ag~~---~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~  156 (251)
                      +|+|||++|..   .+..+.+.+++++.+++|+.+++.+++++.|.+..+     +.+++|++||..+..          
T Consensus        74 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-----~~~~~v~~sS~~~~~----------  138 (238)
T PRK08264         74 VTILVNNAGIFRTGSLLLEGDEDALRAEMETNYFGPLAMARAFAPVLAAN-----GGGAIVNVLSVLSWV----------  138 (238)
T ss_pred             CCEEEECCCcCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-----CCCEEEEEcChhhcc----------
Confidence            99999999973   235567889999999999999999999999998775     468999999977654          


Q ss_pred             CCCCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccC
Q 025509          157 INDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  211 (251)
Q Consensus       157 ~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  211 (251)
                           +.+++..|+.+|++++++++.++.++.+.|  ++++.+.||.++|++...
T Consensus       139 -----~~~~~~~y~~sK~a~~~~~~~l~~~~~~~~--i~~~~v~pg~v~t~~~~~  186 (238)
T PRK08264        139 -----NFPNLGTYSASKAAAWSLTQALRAELAPQG--TRVLGVHPGPIDTDMAAG  186 (238)
T ss_pred             -----CCCCchHhHHHHHHHHHHHHHHHHHhhhcC--eEEEEEeCCccccccccc
Confidence                 566778999999999999999999999888  999999999999998654

>PRK07041 short chain dehydrogenase; Provisional

Probab=99.96  E-value=1.1e-27  Score=197.03  Aligned_cols=173  Identities=20%  Similarity=0.210  Sum_probs=147.2

Q ss_pred             EEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCeeEE
Q 025509            4 VITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQLNIL   83 (251)
Q Consensus         4 lItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~id~l   83 (251)
                      |||||++|||++++++|+++|++|++++|+.+++++..+.+.+   +..+.++.+|+++++++.++++++    +++|++
T Consensus         1 lItGas~~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~---~~~~~~~~~Dl~~~~~~~~~~~~~----~~id~l   73 (230)
T PRK07041          1 LVVGGSSGIGLALARAFAAEGARVTIASRSRDRLAAAARALGG---GAPVRTAALDITDEAAVDAFFAEA----GPFDHV   73 (230)
T ss_pred             CeecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhc---CCceEEEEccCCCHHHHHHHHHhc----CCCCEE
Confidence            6999999999999999999999999999998777666655532   456888999999999999988763    689999


Q ss_pred             EEcCCCCC--CCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccccCCCCC
Q 025509           84 INNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPS  161 (251)
Q Consensus        84 v~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~  161 (251)
                      |||+|...  ++.+.+.+++++++++|+.+++.+++  .+.+.       +.++||++||.++..               
T Consensus        74 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~--~~~~~-------~~g~iv~~ss~~~~~---------------  129 (230)
T PRK07041         74 VITAADTPGGPVRALPLAAAQAAMDSKFWGAYRVAR--AARIA-------PGGSLTFVSGFAAVR---------------  129 (230)
T ss_pred             EECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHh--hhhhc-------CCeEEEEECchhhcC---------------
Confidence            99999753  34567789999999999999999999  33442       358999999987765               


Q ss_pred             CCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccC
Q 025509          162 GYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  211 (251)
Q Consensus       162 ~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  211 (251)
                      +.+....|+.+|+++++|+++++.|+.+    |++++++||++.|++...
T Consensus       130 ~~~~~~~Y~~sK~a~~~~~~~la~e~~~----irv~~i~pg~~~t~~~~~  175 (230)
T PRK07041        130 PSASGVLQGAINAALEALARGLALELAP----VRVNTVSPGLVDTPLWSK  175 (230)
T ss_pred             CCCcchHHHHHHHHHHHHHHHHHHHhhC----ceEEEEeecccccHHHHh
Confidence            5667789999999999999999999974    899999999999998653

>PRK08324 short chain dehydrogenase; Validated

Probab=99.96  E-value=1.4e-27  Score=224.69  Aligned_cols=187  Identities=28%  Similarity=0.350  Sum_probs=165.1

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      |++|||||+||||+++|+.|+++|++|++++|+...++...+.+...   ..+.++.+|+++.+++.++++++.+.+|++
T Consensus       423 k~vLVTGasggIG~~la~~L~~~Ga~Vvl~~r~~~~~~~~~~~l~~~---~~v~~v~~Dvtd~~~v~~~~~~~~~~~g~i  499 (681)
T PRK08324        423 KVALVTGAAGGIGKATAKRLAAEGACVVLADLDEEAAEAAAAELGGP---DRALGVACDVTDEAAVQAAFEEAALAFGGV  499 (681)
T ss_pred             CEEEEecCCCHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHhcc---CcEEEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence            57999999999999999999999999999999988877776665432   468899999999999999999998889999


Q ss_pred             eEEEEcCCCCC--CCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccccCC
Q 025509           81 NILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKIN  158 (251)
Q Consensus        81 d~lv~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~  158 (251)
                      |++|||||...  +..+.+.++|+..+++|+.+++.+++++.+.+++++    .+|+||++||..+..            
T Consensus       500 DvvI~~AG~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~----~~g~iV~vsS~~~~~------------  563 (681)
T PRK08324        500 DIVVSNAGIAISGPIEETSDEDWRRSFDVNATGHFLVAREAVRIMKAQG----LGGSIVFIASKNAVN------------  563 (681)
T ss_pred             CEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC----CCcEEEEECCccccC------------
Confidence            99999999753  356678899999999999999999999999998751    248999999987765            


Q ss_pred             CCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcc--cCCcccC
Q 025509          159 DPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAI--ATNIIRH  211 (251)
Q Consensus       159 ~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v--~t~~~~~  211 (251)
                         +.+++.+|+++|+++++++++++.++.+.|  |++|.|+||.+  .|++...
T Consensus       564 ---~~~~~~~Y~asKaa~~~l~~~la~e~~~~g--Irvn~v~Pg~v~~~t~~~~~  613 (681)
T PRK08324        564 ---PGPNFGAYGAAKAAELHLVRQLALELGPDG--IRVNGVNPDAVVRGSGIWTG  613 (681)
T ss_pred             ---CCCCcHHHHHHHHHHHHHHHHHHHHhcccC--eEEEEEeCceeecCCccccc
Confidence               566788999999999999999999999999  99999999999  7877653

>PRK07806 short chain dehydrogenase; Provisional

Probab=99.96  E-value=5.7e-28  Score=200.93  Aligned_cols=185  Identities=24%  Similarity=0.242  Sum_probs=149.9

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCch-hHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCC
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIA-AGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQ   79 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~-~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~   79 (251)
                      |++|||||++|||++++++|+++|++|++++|+.. ..+....++...  +.++.++++|+++++++.++++++.+++++
T Consensus         7 k~vlItGasggiG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   84 (248)
T PRK07806          7 KTALVTGSSRGIGADTAKILAGAGAHVVVNYRQKAPRANKVVAEIEAA--GGRASAVGADLTDEESVAALMDTAREEFGG   84 (248)
T ss_pred             cEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCchHhHHHHHHHHHhc--CCceEEEEcCCCCHHHHHHHHHHHHHhCCC
Confidence            57999999999999999999999999999998753 455555555442  456888999999999999999999888889


Q ss_pred             eeEEEEcCCCCCCCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccccCCC
Q 025509           80 LNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKIND  159 (251)
Q Consensus        80 id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~  159 (251)
                      +|++|||||....    ...+++..+++|+.+++.+++++.|+|.+       .+++|++||..+....          .
T Consensus        85 ~d~vi~~ag~~~~----~~~~~~~~~~vn~~~~~~l~~~~~~~~~~-------~~~iv~isS~~~~~~~----------~  143 (248)
T PRK07806         85 LDALVLNASGGME----SGMDEDYAMRLNRDAQRNLARAALPLMPA-------GSRVVFVTSHQAHFIP----------T  143 (248)
T ss_pred             CcEEEECCCCCCC----CCCCcceeeEeeeHHHHHHHHHHHhhccC-------CceEEEEeCchhhcCc----------c
Confidence            9999999986321    12235667899999999999999998853       4699999996543100          0


Q ss_pred             CCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCccc
Q 025509          160 PSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIR  210 (251)
Q Consensus       160 ~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~  210 (251)
                      ..+.+.+..|+.+|++++.++++++.++.+.|  |+|++|+||++.|++..
T Consensus       144 ~~~~~~~~~Y~~sK~a~e~~~~~l~~~~~~~~--i~v~~v~pg~~~~~~~~  192 (248)
T PRK07806        144 VKTMPEYEPVARSKRAGEDALRALRPELAEKG--IGFVVVSGDMIEGTVTA  192 (248)
T ss_pred             ccCCccccHHHHHHHHHHHHHHHHHHHhhccC--eEEEEeCCccccCchhh
Confidence            01334467899999999999999999999999  99999999999998754

>TIGR01830 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) reductase

Probab=99.96  E-value=3e-27  Score=195.14  Aligned_cols=185  Identities=32%  Similarity=0.427  Sum_probs=158.5

Q ss_pred             EEEECCCChhHHHHHHHHHHcCCEEEEEecCc-hhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCee
Q 025509            3 IVITGATSGIGTETARVLALRGVHVVMGVRDI-AAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQLN   81 (251)
Q Consensus         3 vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~-~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~id   81 (251)
                      +||||++++||.+++++|+++|++|++++|+. +..+...+.+.+.  +..+.++.+|+++.++++++++++.+.++++|
T Consensus         1 vlItG~~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   78 (239)
T TIGR01830         1 ALVTGASRGIGRAIALKLAKEGAKVIITYRSSEEGAEEVVEELKAY--GVKALGVVCDVSDREDVKAVVEEIEEELGPID   78 (239)
T ss_pred             CEEECCCcHHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHhc--CCceEEEEecCCCHHHHHHHHHHHHHHhCCCC
Confidence            58999999999999999999999999998875 4444444444433  45688999999999999999999988889999


Q ss_pred             EEEEcCCCCCC--CCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccccCCC
Q 025509           82 ILINNAGIMGT--PFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKIND  159 (251)
Q Consensus        82 ~lv~~ag~~~~--~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~  159 (251)
                      +||||+|....  ..+.+.+++++.+++|+.+++.+++.+.+++.+.     ..++++++||.++..             
T Consensus        79 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-----~~~~~v~~sS~~~~~-------------  140 (239)
T TIGR01830        79 ILVNNAGITRDNLLMRMKEEDWDAVIDTNLTGVFNLTQAVLRIMIKQ-----RSGRIINISSVVGLM-------------  140 (239)
T ss_pred             EEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-----CCeEEEEECCccccC-------------
Confidence            99999997532  4456778899999999999999999999998664     357999999987765             


Q ss_pred             CCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccC
Q 025509          160 PSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  211 (251)
Q Consensus       160 ~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  211 (251)
                        +.+.+..|+.+|++++.++++++.++...|  ++++.++||++.|++...
T Consensus       141 --g~~~~~~y~~~k~a~~~~~~~l~~~~~~~g--~~~~~i~pg~~~~~~~~~  188 (239)
T TIGR01830       141 --GNAGQANYAASKAGVIGFTKSLAKELASRN--ITVNAVAPGFIDTDMTDK  188 (239)
T ss_pred             --CCCCCchhHHHHHHHHHHHHHHHHHHhhcC--eEEEEEEECCCCChhhhh
Confidence              556778999999999999999999998888  999999999999987654

This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis.

>PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.96  E-value=3.1e-27  Score=195.27  Aligned_cols=183  Identities=21%  Similarity=0.197  Sum_probs=155.0

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      |+++||||++|||.++++.|+++|++|++++|++++.+...+.+.+   ...+.++++|+++.++++++++++...++++
T Consensus         6 ~~vlItGa~g~iG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~---~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i   82 (238)
T PRK05786          6 KKVAIIGVSEGLGYAVAYFALKEGAQVCINSRNENKLKRMKKTLSK---YGNIHYVVGDVSSTESARNVIEKAAKVLNAI   82 (238)
T ss_pred             cEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh---cCCeEEEECCCCCHHHHHHHHHHHHHHhCCC
Confidence            5899999999999999999999999999999998777665555533   2358889999999999999999988888899


Q ss_pred             eEEEEcCCCCCCCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccccCCCC
Q 025509           81 NILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDP  160 (251)
Q Consensus        81 d~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~  160 (251)
                      |.+|+|+|..........++++.++++|+.+++.+++.++|.+.+       .+++|++||..+...             
T Consensus        83 d~ii~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~-------~~~iv~~ss~~~~~~-------------  142 (238)
T PRK05786         83 DGLVVTVGGYVEDTVEEFSGLEEMLTNHIKIPLYAVNASLRFLKE-------GSSIVLVSSMSGIYK-------------  142 (238)
T ss_pred             CEEEEcCCCcCCCchHHHHHHHHHHHHhchHHHHHHHHHHHHHhc-------CCEEEEEecchhccc-------------
Confidence            999999996532222234788999999999999999999999854       479999999765321             


Q ss_pred             CCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcc
Q 025509          161 SGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNII  209 (251)
Q Consensus       161 ~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~  209 (251)
                       +.+.+..|+.+|++++.++++++.++.+.|  |+++.|+||++.|++.
T Consensus       143 -~~~~~~~Y~~sK~~~~~~~~~~~~~~~~~g--i~v~~i~pg~v~~~~~  188 (238)
T PRK05786        143 -ASPDQLSYAVAKAGLAKAVEILASELLGRG--IRVNGIAPTTISGDFE  188 (238)
T ss_pred             -CCCCchHHHHHHHHHHHHHHHHHHHHhhcC--eEEEEEecCccCCCCC
Confidence             345667899999999999999999999888  9999999999999874

>PRK08017 oxidoreductase; Provisional

Probab=99.96  E-value=3.4e-27  Score=197.07  Aligned_cols=181  Identities=34%  Similarity=0.407  Sum_probs=155.8

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcC-CC
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQH-HQ   79 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~-g~   79 (251)
                      |++|||||+||||.++++.|+++|++|++++|+.++.+...+        ..+..+++|+++.+++..+++.+.... ++
T Consensus         3 k~vlVtGasg~IG~~la~~l~~~g~~v~~~~r~~~~~~~~~~--------~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~   74 (256)
T PRK08017          3 KSVLITGCSSGIGLEAALELKRRGYRVLAACRKPDDVARMNS--------LGFTGILLDLDDPESVERAADEVIALTDNR   74 (256)
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHhHHHHh--------CCCeEEEeecCCHHHHHHHHHHHHHhcCCC
Confidence            479999999999999999999999999999998766554321        236788999999999999999886643 68


Q ss_pred             eeEEEEcCCCCC--CCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccccC
Q 025509           80 LNILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKI  157 (251)
Q Consensus        80 id~lv~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~  157 (251)
                      +|.+|||+|...  +..+.+.+++++.+++|+.|++.+++.+++.+++.     +.++||++||..+..           
T Consensus        75 ~~~ii~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~-----~~~~iv~~ss~~~~~-----------  138 (256)
T PRK08017         75 LYGLFNNAGFGVYGPLSTISRQQMEQQFSTNFFGTHQLTMLLLPAMLPH-----GEGRIVMTSSVMGLI-----------  138 (256)
T ss_pred             CeEEEECCCCCCccchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhc-----CCCEEEEEcCccccc-----------
Confidence            999999999643  35567888999999999999999999999999875     457999999987655           


Q ss_pred             CCCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccC
Q 025509          158 NDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  211 (251)
Q Consensus       158 ~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  211 (251)
                          +.+....|+.+|++++.++++++.++.+.|  ++++.|+||.+.|++...
T Consensus       139 ----~~~~~~~Y~~sK~~~~~~~~~l~~~~~~~~--i~v~~v~pg~~~t~~~~~  186 (256)
T PRK08017        139 ----STPGRGAYAASKYALEAWSDALRMELRHSG--IKVSLIEPGPIRTRFTDN  186 (256)
T ss_pred             ----CCCCccHHHHHHHHHHHHHHHHHHHHhhcC--CEEEEEeCCCcccchhhc
Confidence                556778999999999999999999999888  999999999999987654

>PRK06953 short chain dehydrogenase; Provisional

Probab=99.95  E-value=7.8e-27  Score=191.26  Aligned_cols=179  Identities=25%  Similarity=0.283  Sum_probs=146.1

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      |+++||||+++||++++++|+++|++|++++|+.+..++...        ..+.++.+|+++.++++++++++..  +++
T Consensus         2 ~~vlvtG~sg~iG~~la~~L~~~G~~v~~~~r~~~~~~~~~~--------~~~~~~~~D~~~~~~v~~~~~~~~~--~~~   71 (222)
T PRK06953          2 KTVLIVGASRGIGREFVRQYRADGWRVIATARDAAALAALQA--------LGAEALALDVADPASVAGLAWKLDG--EAL   71 (222)
T ss_pred             ceEEEEcCCCchhHHHHHHHHhCCCEEEEEECCHHHHHHHHh--------ccceEEEecCCCHHHHHHHHHHhcC--CCC
Confidence            589999999999999999999999999999998766544321        1356889999999999998877642  479


Q ss_pred             eEEEEcCCCCC----CCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCccccc
Q 025509           81 NILINNAGIMG----TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDK  156 (251)
Q Consensus        81 d~lv~~ag~~~----~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~  156 (251)
                      |++|||+|...    +..+.+.++++..+++|+.+++.++++++|.+.+      ..++++++||..+..+..       
T Consensus        72 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~------~~g~iv~isS~~~~~~~~-------  138 (222)
T PRK06953         72 DAAVYVAGVYGPRTEGVEPITREDFDAVMHTNVLGPMQLLPILLPLVEA------AGGVLAVLSSRMGSIGDA-------  138 (222)
T ss_pred             CEEEECCCcccCCCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHhhhc------cCCeEEEEcCcccccccc-------
Confidence            99999999752    2345688999999999999999999999998865      257899999977654210       


Q ss_pred             CCCCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccC
Q 025509          157 INDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  211 (251)
Q Consensus       157 ~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  211 (251)
                           +......|+.+|++++++++.++.++.  +  +++++|+||+++|++...
T Consensus       139 -----~~~~~~~Y~~sK~a~~~~~~~~~~~~~--~--i~v~~v~Pg~i~t~~~~~  184 (222)
T PRK06953        139 -----TGTTGWLYRASKAALNDALRAASLQAR--H--ATCIALHPGWVRTDMGGA  184 (222)
T ss_pred             -----cCCCccccHHhHHHHHHHHHHHhhhcc--C--cEEEEECCCeeecCCCCC
Confidence                 111123699999999999999998874  4  999999999999999764

>PRK12367 short chain dehydrogenase; Provisional

Probab=99.95  E-value=3.9e-26  Score=190.00  Aligned_cols=174  Identities=19%  Similarity=0.164  Sum_probs=128.8

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      |++|||||++|||+++|++|+++|++|++++|+.....+  . . ..  . ...++.+|+++.+++.+       .++++
T Consensus        15 k~~lITGas~gIG~ala~~l~~~G~~Vi~~~r~~~~~~~--~-~-~~--~-~~~~~~~D~~~~~~~~~-------~~~~i   80 (245)
T PRK12367         15 KRIGITGASGALGKALTKAFRAKGAKVIGLTHSKINNSE--S-N-DE--S-PNEWIKWECGKEESLDK-------QLASL   80 (245)
T ss_pred             CEEEEEcCCcHHHHHHHHHHHHCCCEEEEEECCchhhhh--h-h-cc--C-CCeEEEeeCCCHHHHHH-------hcCCC
Confidence            579999999999999999999999999999998622111  1 1 11  1 23578899999987764       34689


Q ss_pred             eEEEEcCCCCCCCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccccCCCC
Q 025509           81 NILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDP  160 (251)
Q Consensus        81 d~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~  160 (251)
                      |++|||||... ..+.+.++|++.+++|+.+++.++++++|.|.++..  ..++.+++.+|.++..              
T Consensus        81 DilVnnAG~~~-~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~--~~g~~iiv~ss~a~~~--------------  143 (245)
T PRK12367         81 DVLILNHGINP-GGRQDPENINKALEINALSSWRLLELFEDIALNNNS--QIPKEIWVNTSEAEIQ--------------  143 (245)
T ss_pred             CEEEECCccCC-cCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccc--CCCeEEEEEecccccC--------------
Confidence            99999999743 234678899999999999999999999999976311  0123444445544332              


Q ss_pred             CCCCcccccchhHHHHHHHH---HHHHHHhccCCCcEEEEEeeCCcccCCcc
Q 025509          161 SGYNGFRAYSQSKLANILHA---NELARRLKEDGVDITANSVHPGAIATNII  209 (251)
Q Consensus       161 ~~~~~~~~Y~~sK~a~~~~~---~~la~e~~~~g~~i~v~~v~Pg~v~t~~~  209 (251)
                       + +....|++||+|+..+.   +.++.|+.+.|  ++|+.++||+++|++.
T Consensus       144 -~-~~~~~Y~aSKaal~~~~~l~~~l~~e~~~~~--i~v~~~~pg~~~t~~~  191 (245)
T PRK12367        144 -P-ALSPSYEISKRLIGQLVSLKKNLLDKNERKK--LIIRKLILGPFRSELN  191 (245)
T ss_pred             -C-CCCchhHHHHHHHHHHHHHHHHHHHhhcccc--cEEEEecCCCcccccC
Confidence             2 24567999999986544   34444556667  9999999999999874

>KOG1478 consensus 3-keto sterol reductase [Lipid transport and metabolism]

Probab=99.95  E-value=8.6e-27  Score=186.79  Aligned_cols=229  Identities=23%  Similarity=0.271  Sum_probs=183.7

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcC-----CEEEEEecCchhHHHHHHHHHhhCC--CCceEEEEecCCCHHHHHHHHHHH
Q 025509            1 MDIVITGATSGIGTETARVLALRG-----VHVVMGVRDIAAGKDVKETIVKEIP--SAKVDAMELDLSSLASVRNFASEY   73 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G-----~~Vi~~~r~~~~~~~~~~~~~~~~~--~~~v~~~~~D~~~~~~i~~~~~~~   73 (251)
                      |++||||+++|||.++|++|.+..     .++++++|+-+++++++..+.+-+|  ..+++++++|++++.++.+..++|
T Consensus         4 KvalITGanSglGl~i~~RLl~~~De~~~ltl~ltcR~~~kae~vc~~lk~f~p~~~i~~~yvlvD~sNm~Sv~~A~~di   83 (341)
T KOG1478|consen    4 KVALITGANSGLGLAICKRLLAEDDENVRLTLCLTCRNMSKAEAVCAALKAFHPKSTIEVTYVLVDVSNMQSVFRASKDI   83 (341)
T ss_pred             eEEEEecCCCcccHHHHHHHHhccCCceeEEEEEEeCChhHHHHHHHHHHHhCCCceeEEEEEEEehhhHHHHHHHHHHH
Confidence            689999999999999999998753     3588999999999999999999988  567899999999999999999999


Q ss_pred             HhcCCCeeEEEEcCCCCCC--CC---------------------------cCCchhhHHHHHHHHHHHHHHHHHHHHHHH
Q 025509           74 NIQHHQLNILINNAGIMGT--PF---------------------------MLSKDNIELQFATNHLGHFLLTNLLLDTMK  124 (251)
Q Consensus        74 ~~~~g~id~lv~~ag~~~~--~~---------------------------~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~  124 (251)
                      .+++.++|.++.|||++..  ..                           ..+.+++..+++.|+.|++.+.+.+.|+++
T Consensus        84 ~~rf~~ld~iylNAg~~~~~gi~w~~avf~~fsnpv~amt~pt~~~~t~G~is~D~lg~iFetnVFGhfyli~~l~pll~  163 (341)
T KOG1478|consen   84 KQRFQRLDYIYLNAGIMPNPGINWKAAVFGLFSNPVIAMTSPTEGLLTQGKISADGLGEIFETNVFGHFYLIRELEPLLC  163 (341)
T ss_pred             HHHhhhccEEEEccccCCCCcccHHHHHHHHhhchhHHhcCchhhhhhcceecccchhhHhhhcccchhhhHhhhhhHhh
Confidence            9999999999999997532  11                           156778899999999999999999999998


Q ss_pred             HhhccCCCCceEEEEcCccccccccCCcccccCCCCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcc
Q 025509          125 KTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAI  204 (251)
Q Consensus       125 ~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v  204 (251)
                      .+     ....+|++||..+   .+++.++.|+....   +..+|+.||.+++.+.-++-+.+.+.|  +..++|+||..
T Consensus       164 ~~-----~~~~lvwtSS~~a---~kk~lsleD~q~~k---g~~pY~sSKrl~DlLh~A~~~~~~~~g--~~qyvv~pg~~  230 (341)
T KOG1478|consen  164 HS-----DNPQLVWTSSRMA---RKKNLSLEDFQHSK---GKEPYSSSKRLTDLLHVALNRNFKPLG--INQYVVQPGIF  230 (341)
T ss_pred             cC-----CCCeEEEEeeccc---ccccCCHHHHhhhc---CCCCcchhHHHHHHHHHHHhccccccc--hhhhcccCcee
Confidence            75     3459999999643   44666666666544   445899999999999999999999999  88999999999


Q ss_pred             cCCcccCCcchhh-hh-hhhhhhhhHhhhccc-cChHHHHH
Q 025509          205 ATNIIRHNSLFRS-MN-TILHALPGIAGKCLL-KNVQQVIL  242 (251)
Q Consensus       205 ~t~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~-~~~~~~~~  242 (251)
                      .|.+......+.. +- ....-+..+++.++- -++..++.
T Consensus       231 tt~~~~~~l~~~~~~~~~~~fyl~rllgspwh~id~y~aa~  271 (341)
T KOG1478|consen  231 TTNSFSEYLNPFTYFGMLCGFYLARLLGSPWHNIDPYKAAN  271 (341)
T ss_pred             ecchhhhhhhhHHHHHHHHHHHHHHHhcCcccccCcccccc
Confidence            9998764322222 11 233445556666655 33444443

>KOG1204 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.94  E-value=2.4e-26  Score=181.80  Aligned_cols=219  Identities=18%  Similarity=0.148  Sum_probs=161.0

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      |++|+||+|+|||..++..+..++-.....++++...+  .+.+.-+++ ........|++....+..+++..+.+++..
T Consensus         7 ~villTGaSrgiG~~~v~~i~aed~e~~r~g~~r~~a~--~~~L~v~~g-d~~v~~~g~~~e~~~l~al~e~~r~k~gkr   83 (253)
T KOG1204|consen    7 KVILLTGASRGIGTGSVATILAEDDEALRYGVARLLAE--LEGLKVAYG-DDFVHVVGDITEEQLLGALREAPRKKGGKR   83 (253)
T ss_pred             eEEEEecCCCCccHHHHHHHHhcchHHHHHhhhccccc--ccceEEEec-CCcceechHHHHHHHHHHHHhhhhhcCCce
Confidence            47899999999999988888877654333333322222  222222222 334445567777777888888888899999


Q ss_pred             eEEEEcCCCCCCC-----CcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccc
Q 025509           81 NILINNAGIMGTP-----FMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFD  155 (251)
Q Consensus        81 d~lv~~ag~~~~~-----~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~  155 (251)
                      |++|||||...+.     ...+.++|++.+++|+++.+.+.+.++|.+++++    ..+.+|++||.++..         
T Consensus        84 ~iiI~NAG~lgdvsk~~~~~~D~~qw~ky~~~NlfS~VsL~~~~l~~lk~~p----~~~~vVnvSS~aav~---------  150 (253)
T KOG1204|consen   84 DIIIHNAGSLGDVSKGAVDLGDSDQWKKYWDLNLFSMVSLVQWALPKLKKSP----VNGNVVNVSSLAAVR---------  150 (253)
T ss_pred             eEEEecCCCccchhhccCCcccHHHHHHHHHhhhhhHHhhHHHHHHHhcCCC----ccCeEEEecchhhhc---------
Confidence            9999999976552     2446678999999999999999999999998862    258999999998887         


Q ss_pred             cCCCCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCCcchh-hhhhhhhhhhhHhhhccc
Q 025509          156 KINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRHNSLFR-SMNTILHALPGIAGKCLL  234 (251)
Q Consensus       156 ~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~~~~~~-~~~~~~~~~~~~~~~~~~  234 (251)
                            |+.+|++||++|+|.++|.+.||-|-. ++  +++.++.||.++|+|........ .-.......-.+-....+
T Consensus       151 ------p~~~wa~yc~~KaAr~m~f~~lA~EEp-~~--v~vl~~aPGvvDT~mq~~ir~~~~~~p~~l~~f~el~~~~~l  221 (253)
T KOG1204|consen  151 ------PFSSWAAYCSSKAARNMYFMVLASEEP-FD--VRVLNYAPGVVDTQMQVCIRETSRMTPADLKMFKELKESGQL  221 (253)
T ss_pred             ------cccHHHHhhhhHHHHHHHHHHHhhcCc-cc--eeEEEccCCcccchhHHHHhhccCCCHHHHHHHHHHHhcCCc
Confidence                  899999999999999999999999876 67  99999999999999976543322 111223334444444555


Q ss_pred             cChHHHHHHH
Q 025509          235 KNVQQVILNF  244 (251)
Q Consensus       235 ~~~~~~~~~~  244 (251)
                      ..+..-+..|
T Consensus       222 l~~~~~a~~l  231 (253)
T KOG1204|consen  222 LDPQVTAKVL  231 (253)
T ss_pred             CChhhHHHHH
Confidence            5555555543

>PRK08219 short chain dehydrogenase; Provisional

Probab=99.93  E-value=1.8e-24  Score=177.24  Aligned_cols=175  Identities=25%  Similarity=0.369  Sum_probs=147.0

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      |++|||||+++||++++++|+++ ++|++++|+....++..+..      ..+.++.+|+++.+++++++++.    +++
T Consensus         4 ~~vlVtG~~g~iG~~l~~~l~~~-~~V~~~~r~~~~~~~~~~~~------~~~~~~~~D~~~~~~~~~~~~~~----~~i   72 (227)
T PRK08219          4 PTALITGASRGIGAAIARELAPT-HTLLLGGRPAERLDELAAEL------PGATPFPVDLTDPEAIAAAVEQL----GRL   72 (227)
T ss_pred             CEEEEecCCcHHHHHHHHHHHhh-CCEEEEeCCHHHHHHHHHHh------ccceEEecCCCCHHHHHHHHHhc----CCC
Confidence            57999999999999999999999 99999999876655443321      24788999999999998887753    479


Q ss_pred             eEEEEcCCCCCC--CCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccccCC
Q 025509           81 NILINNAGIMGT--PFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKIN  158 (251)
Q Consensus        81 d~lv~~ag~~~~--~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~  158 (251)
                      |+|||++|....  ..+.+.+++...+++|+.+++.+++.+++.+.++      .+++|++||..+..            
T Consensus        73 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~------~~~~v~~ss~~~~~------------  134 (227)
T PRK08219         73 DVLVHNAGVADLGPVAESTVDEWRATLEVNVVAPAELTRLLLPALRAA------HGHVVFINSGAGLR------------  134 (227)
T ss_pred             CEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhC------CCeEEEEcchHhcC------------
Confidence            999999997532  4456778899999999999999999999998874      57999999987654            


Q ss_pred             CCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCccc
Q 025509          159 DPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIR  210 (251)
Q Consensus       159 ~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~  210 (251)
                         +.+++..|+.+|++++.+++.++.++...   |++++|+||++.|++..
T Consensus       135 ---~~~~~~~y~~~K~a~~~~~~~~~~~~~~~---i~~~~i~pg~~~~~~~~  180 (227)
T PRK08219        135 ---ANPGWGSYAASKFALRALADALREEEPGN---VRVTSVHPGRTDTDMQR  180 (227)
T ss_pred             ---cCCCCchHHHHHHHHHHHHHHHHHHhcCC---ceEEEEecCCccchHhh
Confidence               55667899999999999999999887643   89999999999988654

>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA

Probab=99.93  E-value=1.8e-24  Score=222.27  Aligned_cols=179  Identities=18%  Similarity=0.125  Sum_probs=149.5

Q ss_pred             CEEEEECCCChhHHHHHHHHHHc-CCEEEEEecCch--------------------------------------------
Q 025509            1 MDIVITGATSGIGTETARVLALR-GVHVVMGVRDIA--------------------------------------------   35 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~-G~~Vi~~~r~~~--------------------------------------------   35 (251)
                      +++|||||++|||.++|++|+++ |++|++++|+..                                            
T Consensus      1998 ~vvLVTGGarGIG~aiA~~LA~~~ga~viL~gRs~~~~~~p~~a~~~~~~~lk~~~~~~l~~~g~~~~P~~i~~~~~~~~ 2077 (2582)
T TIGR02813      1998 DVFLVTGGAKGVTFECALELAKQCQAHFILAGRSSFDDNEPSWAQGKDENELKKAAIQHLQASGEKPTPKKVDALVRPVL 2077 (2582)
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHhcCCEEEEEeCCcccccCchhhhccchHHHHHhhhhhhhhcccccccchhhhcccccc
Confidence            58999999999999999999988 699999999820                                            


Q ss_pred             ---hHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCeeEEEEcCCCCC--CCCcCCchhhHHHHHHHHH
Q 025509           36 ---AGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQLNILINNAGIMG--TPFMLSKDNIELQFATNHL  110 (251)
Q Consensus        36 ---~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~id~lv~~ag~~~--~~~~~~~~~~~~~~~~n~~  110 (251)
                         ......+.+.+  .+..+.++.+|++|.++++++++++.++ +++|+||||||+..  .+.+.+.++|++++++|+.
T Consensus      2078 ~~~ei~~~la~l~~--~G~~v~y~~~DVtD~~av~~av~~v~~~-g~IDgVVhnAGv~~~~~i~~~t~e~f~~v~~~nv~ 2154 (2582)
T TIGR02813      2078 SSLEIAQALAAFKA--AGASAEYASADVTNSVSVAATVQPLNKT-LQITGIIHGAGVLADKHIQDKTLEEFNAVYGTKVD 2154 (2582)
T ss_pred             hhHHHHHHHHHHHh--cCCcEEEEEccCCCHHHHHHHHHHHHHh-CCCcEEEECCccCCCCCcccCCHHHHHHHHHHHHH
Confidence               00111111211  1567899999999999999999999876 68999999999754  3667899999999999999


Q ss_pred             HHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccccCCCCCCCCcccccchhHHHHHHHHHHHHHHhccC
Q 025509          111 GHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANILHANELARRLKED  190 (251)
Q Consensus       111 ~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~  190 (251)
                      |++.+++++.+.+         .++||++||..+..               +.++++.|+++|++++.|++.++.++.. 
T Consensus      2155 G~~~Ll~al~~~~---------~~~IV~~SSvag~~---------------G~~gqs~YaaAkaaL~~la~~la~~~~~- 2209 (2582)
T TIGR02813      2155 GLLSLLAALNAEN---------IKLLALFSSAAGFY---------------GNTGQSDYAMSNDILNKAALQLKALNPS- 2209 (2582)
T ss_pred             HHHHHHHHHHHhC---------CCeEEEEechhhcC---------------CCCCcHHHHHHHHHHHHHHHHHHHHcCC-
Confidence            9999888876643         34799999998877               6778889999999999999999998753 


Q ss_pred             CCcEEEEEeeCCcccCCccc
Q 025509          191 GVDITANSVHPGAIATNIIR  210 (251)
Q Consensus       191 g~~i~v~~v~Pg~v~t~~~~  210 (251)
                         ++|++|+||+++|+|..
T Consensus      2210 ---irV~sI~wG~wdtgm~~ 2226 (2582)
T TIGR02813      2210 ---AKVMSFNWGPWDGGMVN 2226 (2582)
T ss_pred             ---cEEEEEECCeecCCccc
Confidence               89999999999999875

Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD.

>COG0623 FabI Enoyl-[acyl-carrier-protein]

Probab=99.93  E-value=6.5e-24  Score=168.25  Aligned_cols=193  Identities=18%  Similarity=0.198  Sum_probs=166.8

Q ss_pred             CEEEEECCC--ChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCC
Q 025509            1 MDIVITGAT--SGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHH   78 (251)
Q Consensus         1 k~vlItG~s--~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g   78 (251)
                      |++||+|-+  +.|+..+|+.|.++|+++.++..++ ++++..+++.+..  ....+++||+++.++++.++.++.+++|
T Consensus         7 K~~lI~Gvan~rSIAwGIAk~l~~~GAeL~fTy~~e-~l~krv~~la~~~--~s~~v~~cDV~~d~~i~~~f~~i~~~~g   83 (259)
T COG0623           7 KRILIMGVANNRSIAWGIAKALAEQGAELAFTYQGE-RLEKRVEELAEEL--GSDLVLPCDVTNDESIDALFATIKKKWG   83 (259)
T ss_pred             ceEEEEEecccccHHHHHHHHHHHcCCEEEEEeccH-HHHHHHHHHHhhc--cCCeEEecCCCCHHHHHHHHHHHHHhhC
Confidence            689999976  8999999999999999999999986 7777777776654  2367899999999999999999999999


Q ss_pred             CeeEEEEcCCCCC------CCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCc
Q 025509           79 QLNILINNAGIMG------TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGI  152 (251)
Q Consensus        79 ~id~lv~~ag~~~------~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~  152 (251)
                      .+|+|||+.++.+      ...+.+.|.+...++++.++...+++++.|.|..       +|.++.++=-++..      
T Consensus        84 ~lD~lVHsIaFa~k~el~G~~~dtsre~f~~a~~IS~YS~~~lak~a~~lM~~-------ggSiltLtYlgs~r------  150 (259)
T COG0623          84 KLDGLVHSIAFAPKEELKGDYLDTSREGFLIAMDISAYSFTALAKAARPLMNN-------GGSILTLTYLGSER------  150 (259)
T ss_pred             cccEEEEEeccCChHHhCCcccccCHHHHHhHhhhhHhhHHHHHHHHHHhcCC-------CCcEEEEEecccee------
Confidence            9999999999764      2557889999999999999999999999999964       68888887544433      


Q ss_pred             ccccCCCCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCCcchhhhhh
Q 025509          153 RFDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRHNSLFRSMNT  220 (251)
Q Consensus       153 ~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~  220 (251)
                               -.|.+-..+.+|+++++-+|.||.+++++|  ||||.|+.|+++|=.......+..+..
T Consensus       151 ---------~vPnYNvMGvAKAaLEasvRyLA~dlG~~g--IRVNaISAGPIrTLAasgI~~f~~~l~  207 (259)
T COG0623         151 ---------VVPNYNVMGVAKAALEASVRYLAADLGKEG--IRVNAISAGPIRTLAASGIGDFRKMLK  207 (259)
T ss_pred             ---------ecCCCchhHHHHHHHHHHHHHHHHHhCccC--eEEeeecccchHHHHhhccccHHHHHH
Confidence                     567777899999999999999999999999  999999999999987776665555443

>PRK12428 3-alpha-hydroxysteroid dehydrogenase; Provisional

Probab=99.92  E-value=2.1e-24  Score=179.12  Aligned_cols=164  Identities=29%  Similarity=0.289  Sum_probs=130.0

Q ss_pred             HHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCeeEEEEcCCCCCCCCc
Q 025509           16 TARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQLNILINNAGIMGTPFM   95 (251)
Q Consensus        16 ~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~id~lv~~ag~~~~~~~   95 (251)
                      +|++|+++|++|++++|+..+.+             ...++++|+++.++++++++++.   +++|+||||||...    
T Consensus         1 ~a~~l~~~G~~Vv~~~r~~~~~~-------------~~~~~~~Dl~~~~~v~~~~~~~~---~~iD~li~nAG~~~----   60 (241)
T PRK12428          1 TARLLRFLGARVIGVDRREPGMT-------------LDGFIQADLGDPASIDAAVAALP---GRIDALFNIAGVPG----   60 (241)
T ss_pred             ChHHHHhCCCEEEEEeCCcchhh-------------hhHhhcccCCCHHHHHHHHHHhc---CCCeEEEECCCCCC----
Confidence            47899999999999999876531             12457899999999999998874   58999999999642    


Q ss_pred             CCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCccc----------cc---CCCCCC
Q 025509           96 LSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRF----------DK---INDPSG  162 (251)
Q Consensus        96 ~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~----------~~---~~~~~~  162 (251)
                        .++++..+++|+.+++.+++.++|+|.+       .|+||++||.++.... ...+.          .+   .....+
T Consensus        61 --~~~~~~~~~vN~~~~~~l~~~~~~~~~~-------~g~Iv~isS~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~  130 (241)
T PRK12428         61 --TAPVELVARVNFLGLRHLTEALLPRMAP-------GGAIVNVASLAGAEWP-QRLELHKALAATASFDEGAAWLAAHP  130 (241)
T ss_pred             --CCCHHHhhhhchHHHHHHHHHHHHhccC-------CcEEEEeCcHHhhccc-cchHHHHhhhccchHHHHHHhhhccC
Confidence              2458899999999999999999999853       4799999998765310 00000          00   000135


Q ss_pred             CCcccccchhHHHHHHHHHHHH-HHhccCCCcEEEEEeeCCcccCCcccC
Q 025509          163 YNGFRAYSQSKLANILHANELA-RRLKEDGVDITANSVHPGAIATNIIRH  211 (251)
Q Consensus       163 ~~~~~~Y~~sK~a~~~~~~~la-~e~~~~g~~i~v~~v~Pg~v~t~~~~~  211 (251)
                      .++..+|++||+|+++|+++++ .|+.++|  |+||+|+||++.|+|...
T Consensus       131 ~~~~~~Y~~sK~a~~~~~~~la~~e~~~~g--irvn~v~PG~v~T~~~~~  178 (241)
T PRK12428        131 VALATGYQLSKEALILWTMRQAQPWFGARG--IRVNCVAPGPVFTPILGD  178 (241)
T ss_pred             CCcccHHHHHHHHHHHHHHHHHHHhhhccC--eEEEEeecCCccCccccc
Confidence            5677899999999999999999 9999888  999999999999999764

>PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated

Probab=99.91  E-value=2.4e-23  Score=183.52  Aligned_cols=173  Identities=20%  Similarity=0.188  Sum_probs=129.4

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      |+++||||++|||++++++|+++|++|++++|+.+++++.   ..+.  ...+..+.+|++|.+++.+.+       +++
T Consensus       179 K~VLITGASgGIG~aLA~~La~~G~~Vi~l~r~~~~l~~~---~~~~--~~~v~~v~~Dvsd~~~v~~~l-------~~I  246 (406)
T PRK07424        179 KTVAVTGASGTLGQALLKELHQQGAKVVALTSNSDKITLE---INGE--DLPVKTLHWQVGQEAALAELL-------EKV  246 (406)
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH---Hhhc--CCCeEEEEeeCCCHHHHHHHh-------CCC
Confidence            5799999999999999999999999999999987654332   2111  234678899999998876543       479


Q ss_pred             eEEEEcCCCCCCCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccccCCCC
Q 025509           81 NILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDP  160 (251)
Q Consensus        81 d~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~  160 (251)
                      |++|||||.... .+.+.+++++++++|+.|++.++++++|.|++++.. ...+.+|++|+ ++.               
T Consensus       247 DiLInnAGi~~~-~~~s~e~~~~~~~vNv~g~i~Li~a~lp~m~~~~~~-~~~~iiVn~Ss-a~~---------------  308 (406)
T PRK07424        247 DILIINHGINVH-GERTPEAINKSYEVNTFSAWRLMELFFTTVKTNRDK-ATKEVWVNTSE-AEV---------------  308 (406)
T ss_pred             CEEEECCCcCCC-CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC-CCCeEEEEEcc-ccc---------------
Confidence            999999997532 356788999999999999999999999999875210 01244666654 222               


Q ss_pred             CCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcc
Q 025509          161 SGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNII  209 (251)
Q Consensus       161 ~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~  209 (251)
                       ..+..+.|++||+|+.+|+. ++++.  .+  +.|..++||++.|++.
T Consensus       309 -~~~~~~~Y~ASKaAl~~l~~-l~~~~--~~--~~I~~i~~gp~~t~~~  351 (406)
T PRK07424        309 -NPAFSPLYELSKRALGDLVT-LRRLD--AP--CVVRKLILGPFKSNLN  351 (406)
T ss_pred             -cCCCchHHHHHHHHHHHHHH-HHHhC--CC--CceEEEEeCCCcCCCC
Confidence             22345679999999999985 44443  33  5556689999999874

>smart00822 PKS_KR This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain

Probab=99.91  E-value=8.6e-23  Score=160.16  Aligned_cols=173  Identities=24%  Similarity=0.239  Sum_probs=139.6

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCC-EEEEEecCchhHHHHH---HHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhc
Q 025509            1 MDIVITGATSGIGTETARVLALRGV-HVVMGVRDIAAGKDVK---ETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQ   76 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~-~Vi~~~r~~~~~~~~~---~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~   76 (251)
                      |+++||||++|||.+++++|+++|+ .|++++|+....+...   +++.+.  +.++.++.+|++++++++++++++...
T Consensus         1 ~~~li~Ga~~~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~   78 (180)
T smart00822        1 GTYLITGGLGGLGLELARWLAERGARHLVLLSRSGPDAPGAAELLAELEAL--GAEVTVVACDVADRAALAAALAAIPAR   78 (180)
T ss_pred             CEEEEEcCCChHHHHHHHHHHHhhCCeEEEEeCCCCCCccHHHHHHHHHhc--CCeEEEEECCCCCHHHHHHHHHHHHHH
Confidence            5799999999999999999999997 6888888765543322   333322  457888999999999999999999888


Q ss_pred             CCCeeEEEEcCCCCC--CCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCccc
Q 025509           77 HHQLNILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRF  154 (251)
Q Consensus        77 ~g~id~lv~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~  154 (251)
                      ++++|.+|||+|...  +..+.+.++++..+++|+.+++.+++++.+.         +.++++++||..+..        
T Consensus        79 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~---------~~~~ii~~ss~~~~~--------  141 (180)
T smart00822       79 LGPLRGVIHAAGVLDDGLLANLTPERFAAVLAPKVDGAWNLHELTRDL---------PLDFFVLFSSVAGVL--------  141 (180)
T ss_pred             cCCeeEEEEccccCCccccccCCHHHHHHhhchHhHHHHHHHHHhccC---------CcceEEEEccHHHhc--------
Confidence            899999999999653  3456678899999999999999999987321         357899999987765        


Q ss_pred             ccCCCCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccc
Q 025509          155 DKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIA  205 (251)
Q Consensus       155 ~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~  205 (251)
                             +.+.+..|+++|++++.+++.++    +.|  +.+..+.||++.
T Consensus       142 -------~~~~~~~y~~sk~~~~~~~~~~~----~~~--~~~~~~~~g~~~  179 (180)
T smart00822      142 -------GNPGQANYAAANAFLDALAAHRR----ARG--LPATSINWGAWA  179 (180)
T ss_pred             -------CCCCchhhHHHHHHHHHHHHHHH----hcC--CceEEEeecccc
Confidence                   55677899999999988776654    456  778889999875

It uses NADPH to reduce the keto group to a hydroxy group.

>TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase

Probab=99.88  E-value=2.2e-21  Score=167.85  Aligned_cols=166  Identities=17%  Similarity=0.180  Sum_probs=131.0

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcC--CEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCC
Q 025509            1 MDIVITGATSGIGTETARVLALRG--VHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHH   78 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G--~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g   78 (251)
                      |++|||||+|+||++++++|+++|  ++|++.+|+........+.    .....+.++.+|++|.+++.++++       
T Consensus         5 k~vLVTGatG~IG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~~~----~~~~~~~~v~~Dl~d~~~l~~~~~-------   73 (324)
T TIGR03589         5 KSILITGGTGSFGKAFISRLLENYNPKKIIIYSRDELKQWEMQQK----FPAPCLRFFIGDVRDKERLTRALR-------   73 (324)
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHhCCCcEEEEEcCChhHHHHHHHH----hCCCcEEEEEccCCCHHHHHHHHh-------
Confidence            589999999999999999999986  6899999876544333222    223468899999999999887765       


Q ss_pred             CeeEEEEcCCCCCCCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccccCC
Q 025509           79 QLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKIN  158 (251)
Q Consensus        79 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~  158 (251)
                      ++|+|||+||.....  ....+.++.+++|+.++.++++++.+.         +.++||++||...              
T Consensus        74 ~iD~Vih~Ag~~~~~--~~~~~~~~~~~~Nv~g~~~ll~aa~~~---------~~~~iV~~SS~~~--------------  128 (324)
T TIGR03589        74 GVDYVVHAAALKQVP--AAEYNPFECIRTNINGAQNVIDAAIDN---------GVKRVVALSTDKA--------------  128 (324)
T ss_pred             cCCEEEECcccCCCc--hhhcCHHHHHHHHHHHHHHHHHHHHHc---------CCCEEEEEeCCCC--------------
Confidence            589999999964321  122334678999999999999998753         2469999999532              


Q ss_pred             CCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCc
Q 025509          159 DPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNI  208 (251)
Q Consensus       159 ~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~  208 (251)
                          ..+..+|+.+|++.+.++++++.++...|  ++++++.||++.+|.
T Consensus       129 ----~~p~~~Y~~sK~~~E~l~~~~~~~~~~~g--i~~~~lR~g~v~G~~  172 (324)
T TIGR03589       129 ----ANPINLYGATKLASDKLFVAANNISGSKG--TRFSVVRYGNVVGSR  172 (324)
T ss_pred             ----CCCCCHHHHHHHHHHHHHHHHHhhccccC--cEEEEEeecceeCCC
Confidence                22345799999999999999998888888  999999999999864

This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family.

>PF08659 KR: KR domain; InterPro: IPR013968 This domain is found in bacterial polyketide synthases that catalyse the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain

Probab=99.88  E-value=9.3e-22  Score=156.40  Aligned_cols=172  Identities=23%  Similarity=0.248  Sum_probs=131.9

Q ss_pred             EEEEECCCChhHHHHHHHHHHcCC-EEEEEecCc---hhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcC
Q 025509            2 DIVITGATSGIGTETARVLALRGV-HVVMGVRDI---AAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQH   77 (251)
Q Consensus         2 ~vlItG~s~gIG~a~a~~l~~~G~-~Vi~~~r~~---~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~   77 (251)
                      ++|||||.+|||..+++.|+++|. +|++++|+.   ...++..+++++.  +..+.++++|++|++++.++++++.+.+
T Consensus         2 tylitGG~gglg~~la~~La~~~~~~~il~~r~~~~~~~~~~~i~~l~~~--g~~v~~~~~Dv~d~~~v~~~~~~~~~~~   79 (181)
T PF08659_consen    2 TYLITGGLGGLGQSLARWLAERGARRLILLGRSGAPSAEAEAAIRELESA--GARVEYVQCDVTDPEAVAAALAQLRQRF   79 (181)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTT-SEEEEEESSGGGSTTHHHHHHHHHHT--T-EEEEEE--TTSHHHHHHHHHTSHTTS
T ss_pred             EEEEECCccHHHHHHHHHHHHcCCCEEEEeccCCCccHHHHHHHHHHHhC--CCceeeeccCccCHHHHHHHHHHHHhcc
Confidence            689999999999999999999986 899999983   2345566667665  6789999999999999999999999999


Q ss_pred             CCeeEEEEcCCCCC--CCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccc
Q 025509           78 HQLNILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFD  155 (251)
Q Consensus        78 g~id~lv~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~  155 (251)
                      ++++.|||+||...  ++.+.+.++++..+...+.+..++.+.+.+.         +-..+|++||.++..         
T Consensus        80 ~~i~gVih~ag~~~~~~~~~~t~~~~~~~~~~Kv~g~~~L~~~~~~~---------~l~~~i~~SSis~~~---------  141 (181)
T PF08659_consen   80 GPIDGVIHAAGVLADAPIQDQTPDEFDAVLAPKVRGLWNLHEALENR---------PLDFFILFSSISSLL---------  141 (181)
T ss_dssp             S-EEEEEE-------B-GCC--HHHHHHHHHHHHHHHHHHHHHHTTT---------TTSEEEEEEEHHHHT---------
T ss_pred             CCcceeeeeeeeecccccccCCHHHHHHHHhhhhhHHHHHHHHhhcC---------CCCeEEEECChhHhc---------
Confidence            99999999999764  3667889999999999999999998877662         245899999999887         


Q ss_pred             cCCCCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccc
Q 025509          156 KINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIA  205 (251)
Q Consensus       156 ~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~  205 (251)
                            +.++.+.|+++.+.++.|++..+.    .|  ..+.+|+.|.++
T Consensus       142 ------G~~gq~~YaaAN~~lda~a~~~~~----~g--~~~~sI~wg~W~  179 (181)
T PF08659_consen  142 ------GGPGQSAYAAANAFLDALARQRRS----RG--LPAVSINWGAWD  179 (181)
T ss_dssp             ------T-TTBHHHHHHHHHHHHHHHHHHH----TT--SEEEEEEE-EBS
T ss_pred             ------cCcchHhHHHHHHHHHHHHHHHHh----CC--CCEEEEEccccC
Confidence                  788999999999888887776543    45  456668877654

It uses NADPH to reduce the keto group to a hydroxy group. ; PDB: 3QP9_D 2FR0_A 2FR1_A 2Z5L_A 3SLK_B 3MJE_B 3MJC_A 3MJT_B 3MJV_A 3MJS_B ....

>TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase

Probab=99.87  E-value=9.9e-21  Score=165.35  Aligned_cols=185  Identities=19%  Similarity=0.148  Sum_probs=139.4

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      |++|||||+|+||++++++|+++|++|++++|+........+.+..   ...+.++.+|+++.+++.+++++.     ++
T Consensus         5 k~ilItGatG~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~---~~~~~~~~~Dl~~~~~~~~~~~~~-----~~   76 (349)
T TIGR02622         5 KKVLVTGHTGFKGSWLSLWLLELGAEVYGYSLDPPTSPNLFELLNL---AKKIEDHFGDIRDAAKLRKAIAEF-----KP   76 (349)
T ss_pred             CEEEEECCCChhHHHHHHHHHHCCCEEEEEeCCCccchhHHHHHhh---cCCceEEEccCCCHHHHHHHHhhc-----CC
Confidence            6899999999999999999999999999999876654433332211   235778899999999999888864     68


Q ss_pred             eEEEEcCCCCCCCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccccCCCC
Q 025509           81 NILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDP  160 (251)
Q Consensus        81 d~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~  160 (251)
                      |+|||+|+...  ...+.+++...+++|+.+++.+++++.+.        +..+++|++||...........+   +.+.
T Consensus        77 d~vih~A~~~~--~~~~~~~~~~~~~~N~~g~~~ll~a~~~~--------~~~~~iv~~SS~~vyg~~~~~~~---~~e~  143 (349)
T TIGR02622        77 EIVFHLAAQPL--VRKSYADPLETFETNVMGTVNLLEAIRAI--------GSVKAVVNVTSDKCYRNDEWVWG---YRET  143 (349)
T ss_pred             CEEEECCcccc--cccchhCHHHHHHHhHHHHHHHHHHHHhc--------CCCCEEEEEechhhhCCCCCCCC---CccC
Confidence            99999999532  23455678889999999999999987432        11458999999754421100011   2222


Q ss_pred             CCCCcccccchhHHHHHHHHHHHHHHhcc----CCCcEEEEEeeCCcccCCc
Q 025509          161 SGYNGFRAYSQSKLANILHANELARRLKE----DGVDITANSVHPGAIATNI  208 (251)
Q Consensus       161 ~~~~~~~~Y~~sK~a~~~~~~~la~e~~~----~g~~i~v~~v~Pg~v~t~~  208 (251)
                      .+..+..+|+.+|.+.+.+++.++.++.+    +|  ++++.+.|+.+.+|.
T Consensus       144 ~~~~p~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~--i~~~~lR~~~vyGp~  193 (349)
T TIGR02622       144 DPLGGHDPYSSSKACAELVIASYRSSFFGVANFHG--IKIASARAGNVIGGG  193 (349)
T ss_pred             CCCCCCCcchhHHHHHHHHHHHHHHHhhcccccCC--CcEEEEccCcccCCC
Confidence            23445678999999999999999988754    36  899999999999875

Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose.

>PLN02989 cinnamyl-alcohol dehydrogenase family protein

Probab=99.87  E-value=1.4e-20  Score=162.81  Aligned_cols=189  Identities=17%  Similarity=0.119  Sum_probs=136.6

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      |++|||||+|+||++++++|+++|++|++++|+..................++.++.+|+++.+++.++++       ++
T Consensus         6 k~vlVtG~~G~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------~~   78 (325)
T PLN02989          6 KVVCVTGASGYIASWIVKLLLFRGYTINATVRDPKDRKKTDHLLALDGAKERLKLFKADLLDEGSFELAID-------GC   78 (325)
T ss_pred             CEEEEECCchHHHHHHHHHHHHCCCEEEEEEcCCcchhhHHHHHhccCCCCceEEEeCCCCCchHHHHHHc-------CC
Confidence            68999999999999999999999999999888876554432222111112468889999999998887775       58


Q ss_pred             eEEEEcCCCCCCCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCcccccccc----CCccccc
Q 025509           81 NILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYH----EGIRFDK  156 (251)
Q Consensus        81 d~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~----~~~~~~~  156 (251)
                      |+||||||....  ..+.+++...+++|+.+++.+++++.+.+        ..++||++||.++.....    .+.+.++
T Consensus        79 d~vih~A~~~~~--~~~~~~~~~~~~~n~~g~~~ll~a~~~~~--------~~~~iv~~SS~~~~~~~~~~~~~~~~~~E  148 (325)
T PLN02989         79 ETVFHTASPVAI--TVKTDPQVELINPAVNGTINVLRTCTKVS--------SVKRVILTSSMAAVLAPETKLGPNDVVDE  148 (325)
T ss_pred             CEEEEeCCCCCC--CCCCChHHHHHHHHHHHHHHHHHHHHHcC--------CceEEEEecchhheecCCccCCCCCccCc
Confidence            999999996432  33456678899999999999999987753        135999999987654321    1111221


Q ss_pred             CCCCCCC---CcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccC
Q 025509          157 INDPSGY---NGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  211 (251)
Q Consensus       157 ~~~~~~~---~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  211 (251)
                      -....+.   .....|+.+|.+.+.+++.++.++   |  +.++.+.|+.+.+|....
T Consensus       149 ~~~~~p~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~--~~~~ilR~~~vyGp~~~~  201 (325)
T PLN02989        149 TFFTNPSFAEERKQWYVLSKTLAEDAAWRFAKDN---E--IDLIVLNPGLVTGPILQP  201 (325)
T ss_pred             CCCCchhHhcccccchHHHHHHHHHHHHHHHHHc---C--CeEEEEcCCceeCCCCCC
Confidence            1111111   123579999999998888776654   4  788889999999987653

>PRK13656 trans-2-enoyl-CoA reductase; Provisional

Probab=99.87  E-value=2.5e-20  Score=160.87  Aligned_cols=188  Identities=13%  Similarity=0.055  Sum_probs=137.3

Q ss_pred             CEEEEECCCChhHHH--HHHHHHHcCCEEEEEecCchhHH------------HHHHHHHhhCCCCceEEEEecCCCHHHH
Q 025509            1 MDIVITGATSGIGTE--TARVLALRGVHVVMGVRDIAAGK------------DVKETIVKEIPSAKVDAMELDLSSLASV   66 (251)
Q Consensus         1 k~vlItG~s~gIG~a--~a~~l~~~G~~Vi~~~r~~~~~~------------~~~~~~~~~~~~~~v~~~~~D~~~~~~i   66 (251)
                      |++||||+++|||.|  +|+.| +.|++|+++++..+...            ...+.+.+ . +..+..+.+|+++.+++
T Consensus        42 K~aLVTGaSsGIGlA~~IA~al-~~GA~Vi~v~~~~~~~~~~~~tagwy~~~a~~~~a~~-~-G~~a~~i~~DVss~E~v  118 (398)
T PRK13656         42 KKVLVIGASSGYGLASRIAAAF-GAGADTLGVFFEKPGTEKKTGTAGWYNSAAFDKFAKA-A-GLYAKSINGDAFSDEIK  118 (398)
T ss_pred             CEEEEECCCchHhHHHHHHHHH-HcCCeEEEEecCcchhhhcccccccchHHHHHHHHHh-c-CCceEEEEcCCCCHHHH
Confidence            689999999999999  89999 99999988885432211            22222322 2 45677899999999999


Q ss_pred             HHHHHHHHhcCCCeeEEEEcCCCCCCCC-----------------------c-------------CCchhhHHHHHHHHH
Q 025509           67 RNFASEYNIQHHQLNILINNAGIMGTPF-----------------------M-------------LSKDNIELQFATNHL  110 (251)
Q Consensus        67 ~~~~~~~~~~~g~id~lv~~ag~~~~~~-----------------------~-------------~~~~~~~~~~~~n~~  110 (251)
                      +++++++.+.+|++|+||||+|......                       +             .+.++++  ..++++
T Consensus       119 ~~lie~I~e~~G~IDiLVnSaA~~~r~~p~~g~~~~s~lKpi~~~~~~~~~d~~~~~i~~~s~~~~~~~ei~--~Tv~vM  196 (398)
T PRK13656        119 QKVIELIKQDLGQVDLVVYSLASPRRTDPKTGEVYRSVLKPIGEPYTGKTLDTDKDVIIEVTVEPATEEEIA--DTVKVM  196 (398)
T ss_pred             HHHHHHHHHhcCCCCEEEECCccCCCCCcccCceeecccccccccccCCcccccccceeEEEEeeCCHHHHH--HHHHhh
Confidence            9999999999999999999999652200                       0             1122222  344455


Q ss_pred             HH---HHHHH--HHHHHHHHhhccCCCCceEEEEcCccccccccCCcccccCCCCCCCCcc--cccchhHHHHHHHHHHH
Q 025509          111 GH---FLLTN--LLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGF--RAYSQSKLANILHANEL  183 (251)
Q Consensus       111 ~~---~~l~~--~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~--~~Y~~sK~a~~~~~~~l  183 (251)
                      |.   ...++  ...+.|.       .++++|-+|..+...               .+|.+  ...+.+|++++.-++.|
T Consensus       197 ggedw~~Wi~al~~a~lla-------~g~~~va~TY~G~~~---------------t~p~Y~~g~mG~AKa~LE~~~r~L  254 (398)
T PRK13656        197 GGEDWELWIDALDEAGVLA-------EGAKTVAYSYIGPEL---------------THPIYWDGTIGKAKKDLDRTALAL  254 (398)
T ss_pred             ccchHHHHHHHHHhccccc-------CCcEEEEEecCCcce---------------eecccCCchHHHHHHHHHHHHHHH
Confidence            54   22222  2333332       478999999876554               45555  47799999999999999


Q ss_pred             HHHhccCCCcEEEEEeeCCcccCCcccCCcchhh
Q 025509          184 ARRLKEDGVDITANSVHPGAIATNIIRHNSLFRS  217 (251)
Q Consensus       184 a~e~~~~g~~i~v~~v~Pg~v~t~~~~~~~~~~~  217 (251)
                      +.++++.|  +++|++.+|.+.|......+-+..
T Consensus       255 a~~L~~~g--iran~i~~g~~~T~Ass~Ip~~~l  286 (398)
T PRK13656        255 NEKLAAKG--GDAYVSVLKAVVTQASSAIPVMPL  286 (398)
T ss_pred             HHHhhhcC--CEEEEEecCcccchhhhcCCCcHH
Confidence            99999999  999999999999998877664333

>PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional

Probab=99.85  E-value=9.7e-20  Score=164.84  Aligned_cols=172  Identities=18%  Similarity=0.210  Sum_probs=132.7

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhC-------CCCceEEEEecCCCHHHHHHHHHHH
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEI-------PSAKVDAMELDLSSLASVRNFASEY   73 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~-------~~~~v~~~~~D~~~~~~i~~~~~~~   73 (251)
                      |++|||||+||||++++++|+++|++|++++|+.++++.+.+.+.+..       ...++.++.+|+++.+++.+.+   
T Consensus        81 KvVLVTGATGgIG~aLAr~LLk~G~~Vval~Rn~ekl~~l~~~l~~~~L~~~Ga~~~~~v~iV~gDLtD~esI~~aL---  157 (576)
T PLN03209         81 DLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSAQRAESLVQSVKQMKLDVEGTQPVEKLEIVECDLEKPDQIGPAL---  157 (576)
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhhhhccccccccccCceEEEEecCCCHHHHHHHh---
Confidence            579999999999999999999999999999999888777666553310       1235889999999988876533   


Q ss_pred             HhcCCCeeEEEEcCCCCCCCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcc
Q 025509           74 NIQHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIR  153 (251)
Q Consensus        74 ~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~  153 (251)
                          +++|+||||+|....    ...++...+++|+.++.++++++.+.         +.++||++||.++...      
T Consensus       158 ----ggiDiVVn~AG~~~~----~v~d~~~~~~VN~~Gt~nLl~Aa~~a---------gVgRIV~VSSiga~~~------  214 (576)
T PLN03209        158 ----GNASVVICCIGASEK----EVFDVTGPYRIDYLATKNLVDAATVA---------KVNHFILVTSLGTNKV------  214 (576)
T ss_pred             ----cCCCEEEEccccccc----cccchhhHHHHHHHHHHHHHHHHHHh---------CCCEEEEEccchhccc------
Confidence                479999999996431    22357788999999999988887643         2469999999765310      


Q ss_pred             cccCCCCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCccc
Q 025509          154 FDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIR  210 (251)
Q Consensus       154 ~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~  210 (251)
                              +.+.. .|. +|.++..+.+.+..++...|  |+++.|+||++.|++..
T Consensus       215 --------g~p~~-~~~-sk~~~~~~KraaE~~L~~sG--IrvTIVRPG~L~tp~d~  259 (576)
T PLN03209        215 --------GFPAA-ILN-LFWGVLCWKRKAEEALIASG--LPYTIVRPGGMERPTDA  259 (576)
T ss_pred             --------Ccccc-chh-hHHHHHHHHHHHHHHHHHcC--CCEEEEECCeecCCccc
Confidence                    11111 243 78888888888999998888  99999999999988644

>KOG1502 consensus Flavonol reductase/cinnamoyl-CoA reductase [Defense mechanisms]

Probab=99.83  E-value=1.5e-19  Score=152.62  Aligned_cols=184  Identities=17%  Similarity=0.126  Sum_probs=132.9

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHH--HHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCC
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKD--VKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHH   78 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~--~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g   78 (251)
                      +.|+||||||.||+++++.|+++||+|..+.|+++....  ...++..+  ..+...+..|+.+++++...++       
T Consensus         7 ~~VcVTGAsGfIgswivk~LL~rGY~V~gtVR~~~~~k~~~~L~~l~~a--~~~l~l~~aDL~d~~sf~~ai~-------   77 (327)
T KOG1502|consen    7 KKVCVTGASGFIGSWIVKLLLSRGYTVRGTVRDPEDEKKTEHLRKLEGA--KERLKLFKADLLDEGSFDKAID-------   77 (327)
T ss_pred             cEEEEeCCchHHHHHHHHHHHhCCCEEEEEEcCcchhhhHHHHHhcccC--cccceEEeccccccchHHHHHh-------
Confidence            479999999999999999999999999999999877333  23333222  3458999999999999999887       


Q ss_pred             CeeEEEEcCCCCCCCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccc-cCC---c--
Q 025509           79 QLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAY-HEG---I--  152 (251)
Q Consensus        79 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~-~~~---~--  152 (251)
                      ++|+|+|.|.....  +. .+.-.+.++..+.|+.++++++...-.        -.|||++||.++...+ +..   .  
T Consensus        78 gcdgVfH~Asp~~~--~~-~~~e~~li~pav~Gt~nVL~ac~~~~s--------VkrvV~TSS~aAv~~~~~~~~~~~vv  146 (327)
T KOG1502|consen   78 GCDGVFHTASPVDF--DL-EDPEKELIDPAVKGTKNVLEACKKTKS--------VKRVVYTSSTAAVRYNGPNIGENSVV  146 (327)
T ss_pred             CCCEEEEeCccCCC--CC-CCcHHhhhhHHHHHHHHHHHHHhccCC--------cceEEEeccHHHhccCCcCCCCCccc
Confidence            69999999985432  11 112347899999999999999877641        2499999999987754 211   1  


Q ss_pred             ---ccccCCCCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccC
Q 025509          153 ---RFDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  211 (251)
Q Consensus       153 ---~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  211 (251)
                         .|.|.+.+.-  ....|+.||.-    ++..|.+++.++ ++....|+|++|-.|..++
T Consensus       147 dE~~wsd~~~~~~--~~~~Y~~sK~l----AEkaAw~fa~e~-~~~lv~inP~lV~GP~l~~  201 (327)
T KOG1502|consen  147 DEESWSDLDFCRC--KKLWYALSKTL----AEKAAWEFAKEN-GLDLVTINPGLVFGPGLQP  201 (327)
T ss_pred             ccccCCcHHHHHh--hHHHHHHHHHH----HHHHHHHHHHhC-CccEEEecCCceECCCccc
Confidence               2222221111  11468888755    445566665443 2777789999999999887

>PLN02986 cinnamyl-alcohol dehydrogenase family protein

Probab=99.83  E-value=4.6e-19  Score=153.12  Aligned_cols=188  Identities=21%  Similarity=0.174  Sum_probs=131.2

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      |+||||||+|+||++++++|+++|++|+++.|+....+...+..........+.++.+|+++.+++.++++       ++
T Consensus         6 ~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------~~   78 (322)
T PLN02986          6 KLVCVTGASGYIASWIVKLLLLRGYTVKATVRDLTDRKKTEHLLALDGAKERLKLFKADLLEESSFEQAIE-------GC   78 (322)
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCCcchHHHHHHHhccCCCCceEEEecCCCCcchHHHHHh-------CC
Confidence            58999999999999999999999999999999876544433222111112468889999999998887776       48


Q ss_pred             eEEEEcCCCCCCCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccc-ccc---CCccccc
Q 025509           81 NILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRL-AYH---EGIRFDK  156 (251)
Q Consensus        81 d~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~-~~~---~~~~~~~  156 (251)
                      |+|||+|+.....   ..+...+.+++|+.++..+++++....        +.++||++||.++.. ...   .+..+++
T Consensus        79 d~vih~A~~~~~~---~~~~~~~~~~~nv~gt~~ll~~~~~~~--------~v~rvV~~SS~~~~~~~~~~~~~~~~~~E  147 (322)
T PLN02986         79 DAVFHTASPVFFT---VKDPQTELIDPALKGTINVLNTCKETP--------SVKRVILTSSTAAVLFRQPPIEANDVVDE  147 (322)
T ss_pred             CEEEEeCCCcCCC---CCCchhhhhHHHHHHHHHHHHHHHhcC--------CccEEEEecchhheecCCccCCCCCCcCc
Confidence            9999999964221   112345679999999999998865431        135899999987542 111   1111221


Q ss_pred             CCCCCCC---CcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccC
Q 025509          157 INDPSGY---NGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  211 (251)
Q Consensus       157 ~~~~~~~---~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  211 (251)
                      .....+.   .....|+.||.+.+.+++.+..++   |  +.++.++|+.+.+|...+
T Consensus       148 ~~~~~p~~~~~~~~~Y~~sK~~aE~~~~~~~~~~---~--~~~~~lrp~~v~Gp~~~~  200 (322)
T PLN02986        148 TFFSDPSLCRETKNWYPLSKILAENAAWEFAKDN---G--IDMVVLNPGFICGPLLQP  200 (322)
T ss_pred             ccCCChHHhhccccchHHHHHHHHHHHHHHHHHh---C--CeEEEEcccceeCCCCCC
Confidence            1111111   124679999999888777776654   5  888899999999997553

>PLN02650 dihydroflavonol-4-reductase

Probab=99.83  E-value=7e-19  Score=153.79  Aligned_cols=187  Identities=21%  Similarity=0.093  Sum_probs=131.5

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      |+||||||+|+||++++++|+++|++|++++|+...................+.++.+|+++.+.+.++++       .+
T Consensus         6 k~iLVTGatGfIGs~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~-------~~   78 (351)
T PLN02650          6 ETVCVTGASGFIGSWLVMRLLERGYTVRATVRDPANVKKVKHLLDLPGATTRLTLWKADLAVEGSFDDAIR-------GC   78 (351)
T ss_pred             CEEEEeCCcHHHHHHHHHHHHHCCCEEEEEEcCcchhHHHHHHHhccCCCCceEEEEecCCChhhHHHHHh-------CC
Confidence            58999999999999999999999999999999866555443222111001357889999999988887765       48


Q ss_pred             eEEEEcCCCCCCCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcc-cccCCC
Q 025509           81 NILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIR-FDKIND  159 (251)
Q Consensus        81 d~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~-~~~~~~  159 (251)
                      |+|||+|+.... .  ..+.++..+++|+.++..+++++.+...        ..+||++||.+.........+ +.+-..
T Consensus        79 d~ViH~A~~~~~-~--~~~~~~~~~~~Nv~gt~~ll~aa~~~~~--------~~r~v~~SS~~~~~~~~~~~~~~~E~~~  147 (351)
T PLN02650         79 TGVFHVATPMDF-E--SKDPENEVIKPTVNGMLSIMKACAKAKT--------VRRIVFTSSAGTVNVEEHQKPVYDEDCW  147 (351)
T ss_pred             CEEEEeCCCCCC-C--CCCchhhhhhHHHHHHHHHHHHHHhcCC--------ceEEEEecchhhcccCCCCCCccCcccC
Confidence            999999985321 1  1223457899999999999999876531        248999999754432211111 111100


Q ss_pred             -----C-CCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCccc
Q 025509          160 -----P-SGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIR  210 (251)
Q Consensus       160 -----~-~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~  210 (251)
                           + .+.....+|+.||.+.+.+++.++.++   |  ++++.+.|+.+.+|...
T Consensus       148 ~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---g--i~~~ilRp~~v~Gp~~~  199 (351)
T PLN02650        148 SDLDFCRRKKMTGWMYFVSKTLAEKAAWKYAAEN---G--LDFISIIPTLVVGPFIS  199 (351)
T ss_pred             CchhhhhccccccchHHHHHHHHHHHHHHHHHHc---C--CeEEEECCCceECCCCC
Confidence                 0 011123479999999999888887664   5  88899999999998754

>COG1088 RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope biogenesis, outer membrane]

Probab=99.82  E-value=4.1e-19  Score=146.17  Aligned_cols=188  Identities=20%  Similarity=0.133  Sum_probs=146.1

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcC--CEEEEEecCch--hHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhc
Q 025509            1 MDIVITGATSGIGTETARVLALRG--VHVVMGVRDIA--AGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQ   76 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G--~~Vi~~~r~~~--~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~   76 (251)
                      |++|||||+|+||+++++++.++.  .+|+.++.-.-  ..+.+. .+   ..+.+..+++.|++|.+.+.+++++-   
T Consensus         1 ~~iLVTGGaGFIGsnfvr~~~~~~~d~~v~~~DkLTYAgn~~~l~-~~---~~~~~~~fv~~DI~D~~~v~~~~~~~---   73 (340)
T COG1088           1 MKILVTGGAGFIGSNFVRYILNKHPDDHVVNLDKLTYAGNLENLA-DV---EDSPRYRFVQGDICDRELVDRLFKEY---   73 (340)
T ss_pred             CcEEEecCcchHHHHHHHHHHhcCCCceEEEEecccccCCHHHHH-hh---hcCCCceEEeccccCHHHHHHHHHhc---
Confidence            679999999999999999999874  35777776321  122221 12   11468999999999999999988864   


Q ss_pred             CCCeeEEEEcCCCCCCCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCccccc
Q 025509           77 HHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDK  156 (251)
Q Consensus        77 ~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~  156 (251)
                        .+|+|+|-|+-.  ..+.|.++...++++|+.|++.++.++..+..+        -|++.+|+.-.......+.+  .
T Consensus        74 --~~D~VvhfAAES--HVDRSI~~P~~Fi~TNv~GT~~LLEaar~~~~~--------frf~HISTDEVYG~l~~~~~--~  139 (340)
T COG1088          74 --QPDAVVHFAAES--HVDRSIDGPAPFIQTNVVGTYTLLEAARKYWGK--------FRFHHISTDEVYGDLGLDDD--A  139 (340)
T ss_pred             --CCCeEEEechhc--cccccccChhhhhhcchHHHHHHHHHHHHhccc--------ceEEEeccccccccccCCCC--C
Confidence              799999999864  356788889999999999999999999888643        48999998654432222111  3


Q ss_pred             CCCCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCCcc
Q 025509          157 INDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRHNSL  214 (251)
Q Consensus       157 ~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~~~~  214 (251)
                      +++..|..++++|++||||-++|++++.+.++     +.+....+..-..|-..++++
T Consensus       140 FtE~tp~~PsSPYSASKAasD~lVray~~TYg-----lp~~ItrcSNNYGPyqfpEKl  192 (340)
T COG1088         140 FTETTPYNPSSPYSASKAASDLLVRAYVRTYG-----LPATITRCSNNYGPYQFPEKL  192 (340)
T ss_pred             cccCCCCCCCCCcchhhhhHHHHHHHHHHHcC-----CceEEecCCCCcCCCcCchhh
Confidence            55667888899999999999999999999997     677778998888887766554

>PRK06720 hypothetical protein; Provisional

Probab=99.82  E-value=8.8e-19  Score=137.47  Aligned_cols=140  Identities=18%  Similarity=0.212  Sum_probs=113.2

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      |+++||||++|||.++|+.|+++|++|++++|+.+.+++..+++.+.  +..+.++++|+++.+++.++++++.+.+|++
T Consensus        17 k~~lVTGa~~GIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dl~~~~~v~~~v~~~~~~~G~i   94 (169)
T PRK06720         17 KVAIVTGGGIGIGRNTALLLAKQGAKVIVTDIDQESGQATVEEITNL--GGEALFVSYDMEKQGDWQRVISITLNAFSRI   94 (169)
T ss_pred             CEEEEecCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc--CCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            57999999999999999999999999999999987777776666533  3457788999999999999999998899999


Q ss_pred             eEEEEcCCCCCC--CC-cCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhcc--CCCCceEEEEcCcccc
Q 025509           81 NILINNAGIMGT--PF-MLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARK--SGGEGRIINVSSEGHR  145 (251)
Q Consensus        81 d~lv~~ag~~~~--~~-~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~--~~~~g~iv~vsS~~~~  145 (251)
                      |++|||||+...  +. +.++++ ++  .+|+.+.+..++.+.+++.++++.  ..+.||+..+||.+..
T Consensus        95 DilVnnAG~~~~~~~~~~~~~~~-~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  161 (169)
T PRK06720         95 DMLFQNAGLYKIDSIFSRQQEND-SN--VLCINDVWIEIKQLTSSFMKQQEEVVLSDLPIFGIIGTKGQS  161 (169)
T ss_pred             CEEEECCCcCCCCCcccccchhH-hh--ceeccHHHHHHHHHHHHHHhcCCEEEeecCceeeEecccccc
Confidence            999999997542  33 224334 33  677778888999999998887552  2457999999986643

>PLN02583 cinnamoyl-CoA reductase

Probab=99.82  E-value=1.1e-18  Score=149.14  Aligned_cols=184  Identities=13%  Similarity=0.005  Sum_probs=127.1

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchh--HHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCC
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAA--GKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHH   78 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~--~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g   78 (251)
                      |+||||||+|+||++++++|+++|++|+++.|+...  ..+....+...  +.++.++.+|++|.+++.+.+.       
T Consensus         7 k~vlVTGatG~IG~~lv~~Ll~~G~~V~~~~R~~~~~~~~~~~~~l~~~--~~~~~~~~~Dl~d~~~~~~~l~-------   77 (297)
T PLN02583          7 KSVCVMDASGYVGFWLVKRLLSRGYTVHAAVQKNGETEIEKEIRGLSCE--EERLKVFDVDPLDYHSILDALK-------   77 (297)
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCEEEEEEcCchhhhHHHHHHhcccC--CCceEEEEecCCCHHHHHHHHc-------
Confidence            579999999999999999999999999999986432  22222222111  3468889999999988876553       


Q ss_pred             CeeEEEEcCCCCCCCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccc-cCCcccccC
Q 025509           79 QLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAY-HEGIRFDKI  157 (251)
Q Consensus        79 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~-~~~~~~~~~  157 (251)
                      .+|.++|.++...   +. .+++++.+++|+.+++++++++.+.+.        .++||++||.++.... ........+
T Consensus        78 ~~d~v~~~~~~~~---~~-~~~~~~~~~~nv~gt~~ll~aa~~~~~--------v~riV~~SS~~a~~~~~~~~~~~~~~  145 (297)
T PLN02583         78 GCSGLFCCFDPPS---DY-PSYDEKMVDVEVRAAHNVLEACAQTDT--------IEKVVFTSSLTAVIWRDDNISTQKDV  145 (297)
T ss_pred             CCCEEEEeCccCC---cc-cccHHHHHHHHHHHHHHHHHHHHhcCC--------ccEEEEecchHheecccccCCCCCCC
Confidence            5788888765322   11 134678999999999999999877631        3599999998765422 110011111


Q ss_pred             CCCCCCC------cccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCccc
Q 025509          158 NDPSGYN------GFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIR  210 (251)
Q Consensus       158 ~~~~~~~------~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~  210 (251)
                      ++..+.+      ....|+.||...+.++..++.+.   |  +.++.|+|+.|.+|...
T Consensus       146 ~E~~~~~~~~~~~~~~~Y~~sK~~aE~~~~~~~~~~---g--i~~v~lrp~~v~Gp~~~  199 (297)
T PLN02583        146 DERSWSDQNFCRKFKLWHALAKTLSEKTAWALAMDR---G--VNMVSINAGLLMGPSLT  199 (297)
T ss_pred             CcccCCCHHHHhhcccHHHHHHHHHHHHHHHHHHHh---C--CcEEEEcCCcccCCCCC
Confidence            1111111      11269999999888777665543   5  89999999999998754

>PLN02896 cinnamyl-alcohol dehydrogenase

Probab=99.82  E-value=1.8e-18  Score=151.33  Aligned_cols=187  Identities=19%  Similarity=0.142  Sum_probs=131.3

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      |+||||||+|+||++++++|+++|++|++++|+..........+..   +..+.++.+|+++.+++.++++       .+
T Consensus        11 ~~vLVtG~~GfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~---~~~~~~~~~Dl~~~~~~~~~~~-------~~   80 (353)
T PLN02896         11 GTYCVTGATGYIGSWLVKLLLQRGYTVHATLRDPAKSLHLLSKWKE---GDRLRLFRADLQEEGSFDEAVK-------GC   80 (353)
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHhhcc---CCeEEEEECCCCCHHHHHHHHc-------CC
Confidence            5799999999999999999999999999999986655444333321   3468899999999998887664       47


Q ss_pred             eEEEEcCCCCCCCC---cCCchhh--HHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCccc-
Q 025509           81 NILINNAGIMGTPF---MLSKDNI--ELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRF-  154 (251)
Q Consensus        81 d~lv~~ag~~~~~~---~~~~~~~--~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~-  154 (251)
                      |+|||+|+......   ..+++.+  ...++.|+.++..+++++.+..        ..++||++||.+..........+ 
T Consensus        81 d~Vih~A~~~~~~~~~~~~~~~~~~~~n~~~~~~~g~~~ll~~~~~~~--------~~~~~v~~SS~~vyg~~~~~~~~~  152 (353)
T PLN02896         81 DGVFHVAASMEFDVSSDHNNIEEYVQSKVIDPAIKGTLNVLKSCLKSK--------TVKRVVFTSSISTLTAKDSNGRWR  152 (353)
T ss_pred             CEEEECCccccCCccccccchhhhhhHHhHHHHHHHHHHHHHHHHhcC--------CccEEEEEechhhccccccCCCCC
Confidence            99999999754321   1222222  3456777899999988876652        13589999997655432211111 


Q ss_pred             ccCCCC--CC-------CCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCccc
Q 025509          155 DKINDP--SG-------YNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIR  210 (251)
Q Consensus       155 ~~~~~~--~~-------~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~  210 (251)
                      ..+++.  .+       .+...+|+.||.+.+.+++.++.++   |  +.+..+.|+.+.+|...
T Consensus       153 ~~~~E~~~~p~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~--~~~~~lR~~~vyGp~~~  212 (353)
T PLN02896        153 AVVDETCQTPIDHVWNTKASGWVYVLSKLLTEEAAFKYAKEN---G--IDLVSVITTTVAGPFLT  212 (353)
T ss_pred             CccCcccCCcHHHhhccCCCCccHHHHHHHHHHHHHHHHHHc---C--CeEEEEcCCcccCCCcC
Confidence            011111  11       1234589999999998888776655   4  88888999999998654

>PLN02214 cinnamoyl-CoA reductase

Probab=99.81  E-value=2.1e-18  Score=150.34  Aligned_cols=180  Identities=17%  Similarity=0.123  Sum_probs=130.1

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHH-HHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCC
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDV-KETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQ   79 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~-~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~   79 (251)
                      |+||||||+|+||++++++|+++|++|++++|+.+..... ...+..  ....+.++.+|+++.+++.++++       +
T Consensus        11 ~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~~Dl~d~~~~~~~~~-------~   81 (342)
T PLN02214         11 KTVCVTGAGGYIASWIVKILLERGYTVKGTVRNPDDPKNTHLRELEG--GKERLILCKADLQDYEALKAAID-------G   81 (342)
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCchhhhHHHHHHhhC--CCCcEEEEecCcCChHHHHHHHh-------c
Confidence            5799999999999999999999999999999986543221 122211  12358889999999998887765       5


Q ss_pred             eeEEEEcCCCCCCCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCc---cccc
Q 025509           80 LNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGI---RFDK  156 (251)
Q Consensus        80 id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~---~~~~  156 (251)
                      +|+|||+|+..       .++++..+++|+.++..+++++.+.         +..+||++||.++.++.....   .+++
T Consensus        82 ~d~Vih~A~~~-------~~~~~~~~~~nv~gt~~ll~aa~~~---------~v~r~V~~SS~~avyg~~~~~~~~~~~E  145 (342)
T PLN02214         82 CDGVFHTASPV-------TDDPEQMVEPAVNGAKFVINAAAEA---------KVKRVVITSSIGAVYMDPNRDPEAVVDE  145 (342)
T ss_pred             CCEEEEecCCC-------CCCHHHHHHHHHHHHHHHHHHHHhc---------CCCEEEEeccceeeeccCCCCCCcccCc
Confidence            89999999853       2346788999999999999987653         235899999976554322111   1221


Q ss_pred             CCCC---CCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCccc
Q 025509          157 INDP---SGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIR  210 (251)
Q Consensus       157 ~~~~---~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~  210 (251)
                      ....   .+......|+.||.+.+.+++.++.++   |  +.+..+.|+.|..|...
T Consensus       146 ~~~~~~~~~~~p~~~Y~~sK~~aE~~~~~~~~~~---g--~~~v~lRp~~vyGp~~~  197 (342)
T PLN02214        146 SCWSDLDFCKNTKNWYCYGKMVAEQAAWETAKEK---G--VDLVVLNPVLVLGPPLQ  197 (342)
T ss_pred             ccCCChhhccccccHHHHHHHHHHHHHHHHHHHc---C--CcEEEEeCCceECCCCC
Confidence            1100   011234579999999998887776654   5  78888999999998644

>PRK10217 dTDP-glucose 4,6-dehydratase; Provisional

Probab=99.81  E-value=2e-18  Score=150.98  Aligned_cols=193  Identities=16%  Similarity=0.079  Sum_probs=131.6

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEE-EEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCC
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVV-MGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQ   79 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi-~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~   79 (251)
                      |+||||||+|+||++++++|.++|+.++ ++++.... ... ..+....+...+.++.+|++|.+++.+++++.     +
T Consensus         2 ~~vlVtGatGfIG~~l~~~L~~~g~~~v~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~-----~   74 (355)
T PRK10217          2 RKILITGGAGFIGSALVRYIINETSDAVVVVDKLTYA-GNL-MSLAPVAQSERFAFEKVDICDRAELARVFTEH-----Q   74 (355)
T ss_pred             cEEEEEcCCcHHHHHHHHHHHHcCCCEEEEEecCccc-cch-hhhhhcccCCceEEEECCCcChHHHHHHHhhc-----C
Confidence            5899999999999999999999998754 55554321 111 11111112346788899999999998887752     6


Q ss_pred             eeEEEEcCCCCCCCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccccCCC
Q 025509           80 LNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKIND  159 (251)
Q Consensus        80 id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~  159 (251)
                      +|+|||+||....  ..+.++++..+++|+.++..+++++.+.+........+..++|++||.+... ..... -.++++
T Consensus        75 ~D~Vih~A~~~~~--~~~~~~~~~~~~~N~~gt~~ll~a~~~~~~~~~~~~~~~~~~i~~SS~~vyg-~~~~~-~~~~~E  150 (355)
T PRK10217         75 PDCVMHLAAESHV--DRSIDGPAAFIETNIVGTYTLLEAARAYWNALTEDKKSAFRFHHISTDEVYG-DLHST-DDFFTE  150 (355)
T ss_pred             CCEEEECCcccCc--chhhhChHHHHHHhhHHHHHHHHHHHHhhhcccccccCceEEEEecchhhcC-CCCCC-CCCcCC
Confidence            9999999996432  2344667889999999999999999876421100001235899999865332 11100 001222


Q ss_pred             CCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcc
Q 025509          160 PSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNII  209 (251)
Q Consensus       160 ~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~  209 (251)
                      ..+..+...|+.||.+.+.+++.++.+++     +.+..+.|+.+..|..
T Consensus       151 ~~~~~p~s~Y~~sK~~~e~~~~~~~~~~~-----~~~~i~r~~~v~Gp~~  195 (355)
T PRK10217        151 TTPYAPSSPYSASKASSDHLVRAWLRTYG-----LPTLITNCSNNYGPYH  195 (355)
T ss_pred             CCCCCCCChhHHHHHHHHHHHHHHHHHhC-----CCeEEEeeeeeeCCCC
Confidence            33444567899999999999999887763     5666689999888764

>PLN02653 GDP-mannose 4,6-dehydratase

Probab=99.80  E-value=1.5e-18  Score=151.01  Aligned_cols=172  Identities=15%  Similarity=0.074  Sum_probs=123.5

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhH-HHHHHHHHh-h-CCCCceEEEEecCCCHHHHHHHHHHHHhcC
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAG-KDVKETIVK-E-IPSAKVDAMELDLSSLASVRNFASEYNIQH   77 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~-~~~~~~~~~-~-~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~   77 (251)
                      |+||||||+|+||++++++|+++|++|++++|+.... ....+.+.+ . ..+..+.++.+|++|.+++..+++..    
T Consensus         7 ~~vlVTGatGfiG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~----   82 (340)
T PLN02653          7 KVALITGITGQDGSYLTEFLLSKGYEVHGIIRRSSNFNTQRLDHIYIDPHPNKARMKLHYGDLSDASSLRRWLDDI----   82 (340)
T ss_pred             CEEEEECCCCccHHHHHHHHHHCCCEEEEEecccccccccchhhhccccccccCceEEEEecCCCHHHHHHHHHHc----
Confidence            5799999999999999999999999999998865421 111111211 0 11345889999999999999988864    


Q ss_pred             CCeeEEEEcCCCCCCCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccccC
Q 025509           78 HQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKI  157 (251)
Q Consensus        78 g~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~  157 (251)
                       .+|+|||+|+....  ....++.+..+++|+.++..+++++.++..+++    ...++|++||.... +.... +   +
T Consensus        83 -~~d~Vih~A~~~~~--~~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~----~~~~~v~~Ss~~vy-g~~~~-~---~  150 (340)
T PLN02653         83 -KPDEVYNLAAQSHV--AVSFEMPDYTADVVATGALRLLEAVRLHGQETG----RQIKYYQAGSSEMY-GSTPP-P---Q  150 (340)
T ss_pred             -CCCEEEECCcccch--hhhhhChhHHHHHHHHHHHHHHHHHHHhccccc----cceeEEEeccHHHh-CCCCC-C---C
Confidence             58999999996432  123345677789999999999999988865420    11378888886433 22111 2   2


Q ss_pred             CCCCCCCcccccchhHHHHHHHHHHHHHHhc
Q 025509          158 NDPSGYNGFRAYSQSKLANILHANELARRLK  188 (251)
Q Consensus       158 ~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~  188 (251)
                      .+..+..+...|+.||.+.+.++++++.+++
T Consensus       151 ~E~~~~~p~~~Y~~sK~~~e~~~~~~~~~~~  181 (340)
T PLN02653        151 SETTPFHPRSPYAVAKVAAHWYTVNYREAYG  181 (340)
T ss_pred             CCCCCCCCCChhHHHHHHHHHHHHHHHHHcC
Confidence            3333444567899999999999999988764

>TIGR01472 gmd GDP-mannose 4,6-dehydratase

Probab=99.80  E-value=2.7e-18  Score=149.60  Aligned_cols=171  Identities=17%  Similarity=0.100  Sum_probs=121.6

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhH-HHHHHHHHhh---CCCCceEEEEecCCCHHHHHHHHHHHHhc
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAG-KDVKETIVKE---IPSAKVDAMELDLSSLASVRNFASEYNIQ   76 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~-~~~~~~~~~~---~~~~~v~~~~~D~~~~~~i~~~~~~~~~~   76 (251)
                      |+||||||+|+||++++++|+++|++|++++|+.... .+..+.+.+.   ..+..+.++.+|++|.+++.++++..   
T Consensus         1 ~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~---   77 (343)
T TIGR01472         1 KIALITGITGQDGSYLAEFLLEKGYEVHGLIRRSSSFNTQRIEHIYEDPHNVNKARMKLHYGDLTDSSNLRRIIDEI---   77 (343)
T ss_pred             CeEEEEcCCCcHHHHHHHHHHHCCCEEEEEecCCcccchhhhhhhhhccccccccceeEEEeccCCHHHHHHHHHhC---
Confidence            6899999999999999999999999999999875421 1111111111   11245889999999999999888864   


Q ss_pred             CCCeeEEEEcCCCCCCCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCccccc
Q 025509           77 HHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDK  156 (251)
Q Consensus        77 ~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~  156 (251)
                        ++|+|||+|+.....  .+.+.....+++|+.++..+++++.+.-.+      ...++|++||..... .....+   
T Consensus        78 --~~d~ViH~Aa~~~~~--~~~~~~~~~~~~n~~gt~~ll~a~~~~~~~------~~~~~v~~SS~~vyg-~~~~~~---  143 (343)
T TIGR01472        78 --KPTEIYNLAAQSHVK--VSFEIPEYTADVDGIGTLRLLEAVRTLGLI------KSVKFYQASTSELYG-KVQEIP---  143 (343)
T ss_pred             --CCCEEEECCcccccc--hhhhChHHHHHHHHHHHHHHHHHHHHhCCC------cCeeEEEeccHHhhC-CCCCCC---
Confidence              589999999964321  122334667889999999999998775221      123799999875432 222222   


Q ss_pred             CCCCCCCCcccccchhHHHHHHHHHHHHHHhc
Q 025509          157 INDPSGYNGFRAYSQSKLANILHANELARRLK  188 (251)
Q Consensus       157 ~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~  188 (251)
                      +.+..+..+..+|+.||.+.+.+++.++.+++
T Consensus       144 ~~E~~~~~p~~~Y~~sK~~~e~~~~~~~~~~~  175 (343)
T TIGR01472       144 QNETTPFYPRSPYAAAKLYAHWITVNYREAYG  175 (343)
T ss_pred             CCCCCCCCCCChhHHHHHHHHHHHHHHHHHhC
Confidence            23333444567899999999999999888764

Excluded from this model are members of the clade that score poorly because of highly dervied (phylogenetically long-branch) sequences, e.g. Aneurinibacillus thermoaerophilus Gmd, described as a bifunctional GDP-mannose 4,6-dehydratase/GDP-6-deoxy-D-lyxo-4-hexulose reductase (PUBMED:11096116).

>PLN02572 UDP-sulfoquinovose synthase

Probab=99.80  E-value=5.7e-18  Score=152.17  Aligned_cols=191  Identities=12%  Similarity=0.124  Sum_probs=130.6

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhH----------------HHHHHHHHhhCCCCceEEEEecCCCHH
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAG----------------KDVKETIVKEIPSAKVDAMELDLSSLA   64 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~----------------~~~~~~~~~~~~~~~v~~~~~D~~~~~   64 (251)
                      |+||||||+|+||++++++|+++|++|+++++.....                .+..+.+.+ ..+.++.++.+|++|.+
T Consensus        48 k~VLVTGatGfIGs~Lv~~L~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~v~~v~~Dl~d~~  126 (442)
T PLN02572         48 KKVMVIGGDGYCGWATALHLSKRGYEVAIVDNLCRRLFDHQLGLDSLTPIASIHERVRRWKE-VSGKEIELYVGDICDFE  126 (442)
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCeEEEEeccccccccccccccccccccchHHHHHHHHH-hhCCcceEEECCCCCHH
Confidence            5799999999999999999999999999987421110                000111111 11346889999999999


Q ss_pred             HHHHHHHHHHhcCCCeeEEEEcCCCCCC-CCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCcc
Q 025509           65 SVRNFASEYNIQHHQLNILINNAGIMGT-PFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEG  143 (251)
Q Consensus        65 ~i~~~~~~~~~~~g~id~lv~~ag~~~~-~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~  143 (251)
                      ++.+++++.     ++|+|||+|+.... ....++++++..+++|+.|+.++++++.....        ..++|++||..
T Consensus       127 ~v~~~l~~~-----~~D~ViHlAa~~~~~~~~~~~~~~~~~~~~Nv~gt~nlleaa~~~gv--------~~~~V~~SS~~  193 (442)
T PLN02572        127 FLSEAFKSF-----EPDAVVHFGEQRSAPYSMIDRSRAVFTQHNNVIGTLNVLFAIKEFAP--------DCHLVKLGTMG  193 (442)
T ss_pred             HHHHHHHhC-----CCCEEEECCCcccChhhhcChhhHHHHHHHHHHHHHHHHHHHHHhCC--------CccEEEEecce
Confidence            999988864     69999999975432 22334556677889999999999998766421        24899999976


Q ss_pred             ccccccCCc--ccccCC-------CCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCccc
Q 025509          144 HRLAYHEGI--RFDKIN-------DPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIR  210 (251)
Q Consensus       144 ~~~~~~~~~--~~~~~~-------~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~  210 (251)
                      .+.......  .+.+.+       .+.+..+..+|+.||.+.+.+++..+..+   |  +.+..+.|+.+..|...
T Consensus       194 vYG~~~~~~~E~~i~~~~~~~e~~~~~~~~P~s~Yg~SK~a~E~l~~~~~~~~---g--l~~v~lR~~~vyGp~~~  264 (442)
T PLN02572        194 EYGTPNIDIEEGYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAW---G--IRATDLNQGVVYGVRTD  264 (442)
T ss_pred             ecCCCCCCCcccccccccccccccccCCCCCCCcchhHHHHHHHHHHHHHHhc---C--CCEEEEecccccCCCCc
Confidence            443111000  000000       00123345689999999888887766553   5  78888999999988643

>PLN00198 anthocyanidin reductase; Provisional

Probab=99.80  E-value=1e-17  Score=145.66  Aligned_cols=184  Identities=17%  Similarity=0.120  Sum_probs=128.0

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCC-CCceEEEEecCCCHHHHHHHHHHHHhcCCC
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIP-SAKVDAMELDLSSLASVRNFASEYNIQHHQ   79 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~-~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~   79 (251)
                      |+||||||+|+||++++++|+++|++|++++|+......... +.. .+ ...+.++.+|++|.+++.++++       +
T Consensus        10 ~~vlItG~~GfIG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~-~~~-~~~~~~~~~~~~Dl~d~~~~~~~~~-------~   80 (338)
T PLN00198         10 KTACVIGGTGFLASLLIKLLLQKGYAVNTTVRDPENQKKIAH-LRA-LQELGDLKIFGADLTDEESFEAPIA-------G   80 (338)
T ss_pred             CeEEEECCchHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHH-HHh-cCCCCceEEEEcCCCChHHHHHHHh-------c
Confidence            579999999999999999999999999988887644332221 111 11 1258889999999988887665       5


Q ss_pred             eeEEEEcCCCCCCCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCcccccccc---CCccccc
Q 025509           80 LNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYH---EGIRFDK  156 (251)
Q Consensus        80 id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~---~~~~~~~  156 (251)
                      +|+|||+|+....   ...+.....+++|+.++..+++++.+..        +.++||++||.+......   .+.+..+
T Consensus        81 ~d~vih~A~~~~~---~~~~~~~~~~~~nv~g~~~ll~a~~~~~--------~~~~~v~~SS~~~~g~~~~~~~~~~~~E  149 (338)
T PLN00198         81 CDLVFHVATPVNF---ASEDPENDMIKPAIQGVHNVLKACAKAK--------SVKRVILTSSAAAVSINKLSGTGLVMNE  149 (338)
T ss_pred             CCEEEEeCCCCcc---CCCChHHHHHHHHHHHHHHHHHHHHhcC--------CccEEEEeecceeeeccCCCCCCceecc
Confidence            7999999985321   1123345678999999999999976642        135999999976543211   0111111


Q ss_pred             C-----C-CCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcc
Q 025509          157 I-----N-DPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNII  209 (251)
Q Consensus       157 ~-----~-~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~  209 (251)
                      -     . .....++..+|+.||.+.+.+++.++.++   |  +.+..+.|+.|.+|..
T Consensus       150 ~~~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~--~~~~~~R~~~vyGp~~  203 (338)
T PLN00198        150 KNWTDVEFLTSEKPPTWGYPASKTLAEKAAWKFAEEN---N--IDLITVIPTLMAGPSL  203 (338)
T ss_pred             ccCCchhhhhhcCCccchhHHHHHHHHHHHHHHHHhc---C--ceEEEEeCCceECCCc
Confidence            0     0 00122345679999999998888776653   5  7888899999999864

>PLN02662 cinnamyl-alcohol dehydrogenase family protein

Probab=99.79  E-value=5e-18  Score=146.43  Aligned_cols=186  Identities=15%  Similarity=0.083  Sum_probs=126.9

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhh-CCCCceEEEEecCCCHHHHHHHHHHHHhcCCC
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKE-IPSAKVDAMELDLSSLASVRNFASEYNIQHHQ   79 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~-~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~   79 (251)
                      |+||||||+|+||++++++|+++|++|++++|+........ .+... ....++.++.+|+++++++.++++       +
T Consensus         5 ~~ilVtGatGfIG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------~   76 (322)
T PLN02662          5 KVVCVTGASGYIASWLVKLLLQRGYTVKATVRDPNDPKKTE-HLLALDGAKERLHLFKANLLEEGSFDSVVD-------G   76 (322)
T ss_pred             CEEEEECChHHHHHHHHHHHHHCCCEEEEEEcCCCchhhHH-HHHhccCCCCceEEEeccccCcchHHHHHc-------C
Confidence            57999999999999999999999999999998765433222 12111 012368899999999988877765       5


Q ss_pred             eeEEEEcCCCCCCCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCcccc-ccccCCcccccCC
Q 025509           80 LNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHR-LAYHEGIRFDKIN  158 (251)
Q Consensus        80 id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~-~~~~~~~~~~~~~  158 (251)
                      +|+|||+|+.....   ..+..+..+++|+.++..+++++....        +..+||++||.++. .+......-..++
T Consensus        77 ~d~Vih~A~~~~~~---~~~~~~~~~~~nv~gt~~ll~a~~~~~--------~~~~~v~~SS~~~~~y~~~~~~~~~~~~  145 (322)
T PLN02662         77 CEGVFHTASPFYHD---VTDPQAELIDPAVKGTLNVLRSCAKVP--------SVKRVVVTSSMAAVAYNGKPLTPDVVVD  145 (322)
T ss_pred             CCEEEEeCCcccCC---CCChHHHHHHHHHHHHHHHHHHHHhCC--------CCCEEEEccCHHHhcCCCcCCCCCCcCC
Confidence            79999999864321   111224789999999999999876542        13489999997643 2111000000112


Q ss_pred             CCCCC-C-----cccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCccc
Q 025509          159 DPSGY-N-----GFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIR  210 (251)
Q Consensus       159 ~~~~~-~-----~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~  210 (251)
                      ++.+. +     ....|+.+|.+.+.+++.+..+.   |  +++..+.|+.+.+|...
T Consensus       146 E~~~~~p~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~--~~~~~lRp~~v~Gp~~~  198 (322)
T PLN02662        146 ETWFSDPAFCEESKLWYVLSKTLAEEAAWKFAKEN---G--IDMVTINPAMVIGPLLQ  198 (322)
T ss_pred             cccCCChhHhhcccchHHHHHHHHHHHHHHHHHHc---C--CcEEEEeCCcccCCCCC
Confidence            11111 1     12479999999888777665543   5  78888999999998754

>TIGR01181 dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase

Probab=99.77  E-value=2.8e-17  Score=140.96  Aligned_cols=183  Identities=16%  Similarity=0.098  Sum_probs=129.0

Q ss_pred             EEEEECCCChhHHHHHHHHHHcC--CEEEEEecCchh-HHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCC
Q 025509            2 DIVITGATSGIGTETARVLALRG--VHVVMGVRDIAA-GKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHH   78 (251)
Q Consensus         2 ~vlItG~s~gIG~a~a~~l~~~G--~~Vi~~~r~~~~-~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g   78 (251)
                      +||||||+|+||.+++++|++.|  ++|++.+|.... ..+..+.+.   ....+.++.+|+++++++.++++..     
T Consensus         1 ~ilItGatG~iG~~l~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~Dl~~~~~~~~~~~~~-----   72 (317)
T TIGR01181         1 RILVTGGAGFIGSNFVRYILNEHPDAEVIVLDKLTYAGNLENLADLE---DNPRYRFVKGDIGDRELVSRLFTEH-----   72 (317)
T ss_pred             CEEEEcCCchHHHHHHHHHHHhCCCCEEEEecCCCcchhhhhhhhhc---cCCCcEEEEcCCcCHHHHHHHHhhc-----
Confidence            48999999999999999999987  689888764211 111111121   1235788999999999998887753     


Q ss_pred             CeeEEEEcCCCCCCCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccccCC
Q 025509           79 QLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKIN  158 (251)
Q Consensus        79 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~  158 (251)
                      ++|+|||+|+....  ..+.++++..+++|+.++..+++++.+.+.        ..++|++||...........+   ..
T Consensus        73 ~~d~vi~~a~~~~~--~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~--------~~~~i~~Ss~~v~g~~~~~~~---~~  139 (317)
T TIGR01181        73 QPDAVVHFAAESHV--DRSISGPAAFIETNVVGTYTLLEAVRKYWH--------EFRFHHISTDEVYGDLEKGDA---FT  139 (317)
T ss_pred             CCCEEEEcccccCc--hhhhhCHHHHHHHHHHHHHHHHHHHHhcCC--------CceEEEeeccceeCCCCCCCC---cC
Confidence            69999999996432  223456778899999999999887765532        248999998654321111111   22


Q ss_pred             CCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCccc
Q 025509          159 DPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIR  210 (251)
Q Consensus       159 ~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~  210 (251)
                      +..+..+...|+.+|.+.+.+++.++.+.   +  +++..+.|+.+..+...
T Consensus       140 e~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~--~~~~i~R~~~i~G~~~~  186 (317)
T TIGR01181       140 ETTPLAPSSPYSASKAASDHLVRAYHRTY---G--LPALITRCSNNYGPYQF  186 (317)
T ss_pred             CCCCCCCCCchHHHHHHHHHHHHHHHHHh---C--CCeEEEEeccccCCCCC
Confidence            22233445689999999999999887765   3  67777999999887643

This protein is related to UDP-glucose 4-epimerase (GalE) and likewise has an NAD cofactor.

>PF01073 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/isomerase family; InterPro: IPR002225 The enzyme 3 beta-hydroxysteroid dehydrogenase/5-ene-4-ene isomerase (3 beta-HSD) catalyses the oxidation and isomerisation of 5-ene-3 beta-hydroxypregnene and 5-ene-hydroxyandrostene steroid precursors into the corresponding 4-ene-ketosteroids necessary for the formation of all classes of steroid hormones

Probab=99.77  E-value=1.5e-17  Score=140.94  Aligned_cols=182  Identities=18%  Similarity=0.139  Sum_probs=130.3

Q ss_pred             EEECCCChhHHHHHHHHHHcC--CEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCee
Q 025509            4 VITGATSGIGTETARVLALRG--VHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQLN   81 (251)
Q Consensus         4 lItG~s~gIG~a~a~~l~~~G--~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~id   81 (251)
                      |||||+|.||.+++++|+++|  ++|.+.++.+.....  ..+..   .....++.+|++|.+++.++++       ++|
T Consensus         1 LVTGgsGflG~~iv~~Ll~~g~~~~Vr~~d~~~~~~~~--~~~~~---~~~~~~~~~Di~d~~~l~~a~~-------g~d   68 (280)
T PF01073_consen    1 LVTGGSGFLGSHIVRQLLERGYIYEVRVLDRSPPPKFL--KDLQK---SGVKEYIQGDITDPESLEEALE-------GVD   68 (280)
T ss_pred             CEEcCCcHHHHHHHHHHHHCCCceEEEEcccccccccc--hhhhc---ccceeEEEeccccHHHHHHHhc-------CCc
Confidence            799999999999999999999  688888876544221  11111   1223489999999999998877       689


Q ss_pred             EEEEcCCCCCCCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccccCCC--
Q 025509           82 ILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKIND--  159 (251)
Q Consensus        82 ~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~--  159 (251)
                      +|||+|+......   ....+.++++|+.|+.++++++...         +-.++|++||.+....+..+.++...++  
T Consensus        69 ~V~H~Aa~~~~~~---~~~~~~~~~vNV~GT~nvl~aa~~~---------~VkrlVytSS~~vv~~~~~~~~~~~~dE~~  136 (280)
T PF01073_consen   69 VVFHTAAPVPPWG---DYPPEEYYKVNVDGTRNVLEAARKA---------GVKRLVYTSSISVVFDNYKGDPIINGDEDT  136 (280)
T ss_pred             eEEEeCccccccC---cccHHHHHHHHHHHHHHHHHHHHHc---------CCCEEEEEcCcceeEeccCCCCcccCCcCC
Confidence            9999999654322   3456789999999999999988754         2459999999987765322222221122  


Q ss_pred             CCCCCcccccchhHHHHHHHHHHHHH-HhccCCCcEEEEEeeCCcccCCccc
Q 025509          160 PSGYNGFRAYSQSKLANILHANELAR-RLKEDGVDITANSVHPGAIATNIIR  210 (251)
Q Consensus       160 ~~~~~~~~~Y~~sK~a~~~~~~~la~-e~~~~g~~i~v~~v~Pg~v~t~~~~  210 (251)
                      +.+......|+.||+..+.++..... ++. .|..++.++|+|..|..|...
T Consensus       137 ~~~~~~~~~Y~~SK~~AE~~V~~a~~~~~~-~g~~l~t~~lRP~~IyGp~d~  187 (280)
T PF01073_consen  137 PYPSSPLDPYAESKALAEKAVLEANGSELK-NGGRLRTCALRPAGIYGPGDQ  187 (280)
T ss_pred             cccccccCchHHHHHHHHHHHHhhcccccc-cccceeEEEEeccEEeCcccc
Confidence            12223556899999998887766543 222 233499999999999998654

3Beta_HSD; GO: 0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity, 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0006694 steroid biosynthetic process, 0055114 oxidation-reduction process

>COG1087 GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane]

Probab=99.77  E-value=2.5e-17  Score=136.23  Aligned_cols=161  Identities=21%  Similarity=0.160  Sum_probs=126.3

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      |+||||||+|.||++++.+|++.|+.|++.+.....-.+....       ..+.+++.|+.|.+.+.+++++.     ++
T Consensus         1 ~~iLVtGGAGYIGSHtv~~Ll~~G~~vvV~DNL~~g~~~~v~~-------~~~~f~~gDi~D~~~L~~vf~~~-----~i   68 (329)
T COG1087           1 MKVLVTGGAGYIGSHTVRQLLKTGHEVVVLDNLSNGHKIALLK-------LQFKFYEGDLLDRALLTAVFEEN-----KI   68 (329)
T ss_pred             CeEEEecCcchhHHHHHHHHHHCCCeEEEEecCCCCCHHHhhh-------ccCceEEeccccHHHHHHHHHhc-----CC
Confidence            6899999999999999999999999999999755443333321       12789999999999999988874     89


Q ss_pred             eEEEEcCCCCCCCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccccCCCC
Q 025509           81 NILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDP  160 (251)
Q Consensus        81 d~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~  160 (251)
                      |.|||.||...  .-.|-++..+.++.|+.|++.|++++..+-.          +=+++||+++.++.+...   ++.+.
T Consensus        69 daViHFAa~~~--VgESv~~Pl~Yy~NNv~gTl~Ll~am~~~gv----------~~~vFSStAavYG~p~~~---PI~E~  133 (329)
T COG1087          69 DAVVHFAASIS--VGESVQNPLKYYDNNVVGTLNLIEAMLQTGV----------KKFIFSSTAAVYGEPTTS---PISET  133 (329)
T ss_pred             CEEEECccccc--cchhhhCHHHHHhhchHhHHHHHHHHHHhCC----------CEEEEecchhhcCCCCCc---ccCCC
Confidence            99999999533  2235667888999999999999988776642          345556667777665554   45555


Q ss_pred             CCCCcccccchhHHHHHHHHHHHHHHhc
Q 025509          161 SGYNGFRAYSQSKLANILHANELARRLK  188 (251)
Q Consensus       161 ~~~~~~~~Y~~sK~a~~~~~~~la~e~~  188 (251)
                      .+..+..+|+.||.+.+.+.+.+++...
T Consensus       134 ~~~~p~NPYG~sKlm~E~iL~d~~~a~~  161 (329)
T COG1087         134 SPLAPINPYGRSKLMSEEILRDAAKANP  161 (329)
T ss_pred             CCCCCCCcchhHHHHHHHHHHHHHHhCC
Confidence            6666777999999999999999988776

>PLN02240 UDP-glucose 4-epimerase

Probab=99.76  E-value=8e-17  Score=140.67  Aligned_cols=182  Identities=15%  Similarity=0.123  Sum_probs=127.0

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhC--CCCceEEEEecCCCHHHHHHHHHHHHhcCC
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEI--PSAKVDAMELDLSSLASVRNFASEYNIQHH   78 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~--~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g   78 (251)
                      |+||||||+|+||++++++|+++|++|++++|.........+.+.+..  ...++.++.+|+++.+++.+++++.     
T Consensus         6 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~l~~~~~~~-----   80 (352)
T PLN02240          6 RTILVTGGAGYIGSHTVLQLLLAGYKVVVIDNLDNSSEEALRRVKELAGDLGDNLVFHKVDLRDKEALEKVFAST-----   80 (352)
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCcchHHHHHHHHHhhcccCccceEEecCcCCHHHHHHHHHhC-----
Confidence            579999999999999999999999999999875433322222222211  1245788999999999998887752     


Q ss_pred             CeeEEEEcCCCCCCCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccccCC
Q 025509           79 QLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKIN  158 (251)
Q Consensus        79 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~  158 (251)
                      ++|+|||+|+....  ..+.+++...+++|+.++..+++++...         +..++|++||... ++...+.+   ++
T Consensus        81 ~~d~vih~a~~~~~--~~~~~~~~~~~~~n~~~~~~l~~~~~~~---------~~~~~v~~Ss~~v-yg~~~~~~---~~  145 (352)
T PLN02240         81 RFDAVIHFAGLKAV--GESVAKPLLYYDNNLVGTINLLEVMAKH---------GCKKLVFSSSATV-YGQPEEVP---CT  145 (352)
T ss_pred             CCCEEEEccccCCc--cccccCHHHHHHHHHHHHHHHHHHHHHc---------CCCEEEEEccHHH-hCCCCCCC---CC
Confidence            79999999996432  1234567889999999999988765322         2358999999643 32222222   33


Q ss_pred             CCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccC
Q 025509          159 DPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIAT  206 (251)
Q Consensus       159 ~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t  206 (251)
                      +..+..+...|+.+|.+.+.+++.++.+..  +  +.+..+.|+.+..
T Consensus       146 E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~--~--~~~~~~R~~~v~G  189 (352)
T PLN02240        146 EEFPLSATNPYGRTKLFIEEICRDIHASDP--E--WKIILLRYFNPVG  189 (352)
T ss_pred             CCCCCCCCCHHHHHHHHHHHHHHHHHHhcC--C--CCEEEEeecCcCC
Confidence            334455567899999999999988875522  3  5555566655544

>TIGR03466 HpnA hopanoid-associated sugar epimerase

Probab=99.76  E-value=3.6e-17  Score=141.17  Aligned_cols=176  Identities=24%  Similarity=0.234  Sum_probs=128.8

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      |++|||||+|+||.+++++|+++|++|++++|++......        ....+.++.+|+++.+++.++++       .+
T Consensus         1 ~~vlItG~~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~--------~~~~~~~~~~D~~~~~~l~~~~~-------~~   65 (328)
T TIGR03466         1 MKVLVTGATGFVGSAVVRLLLEQGEEVRVLVRPTSDRRNL--------EGLDVEIVEGDLRDPASLRKAVA-------GC   65 (328)
T ss_pred             CeEEEECCccchhHHHHHHHHHCCCEEEEEEecCcccccc--------ccCCceEEEeeCCCHHHHHHHHh-------CC
Confidence            5799999999999999999999999999999986543221        12358889999999998887665       57


Q ss_pred             eEEEEcCCCCCCCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccccCCCC
Q 025509           81 NILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDP  160 (251)
Q Consensus        81 d~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~  160 (251)
                      |+|||+|+....    ..++++..+++|+.++..+++++...         +.+++|++||.........+.++++-...
T Consensus        66 d~vi~~a~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~---------~~~~~v~~SS~~~~~~~~~~~~~~e~~~~  132 (328)
T TIGR03466        66 RALFHVAADYRL----WAPDPEEMYAANVEGTRNLLRAALEA---------GVERVVYTSSVATLGVRGDGTPADETTPS  132 (328)
T ss_pred             CEEEEeceeccc----CCCCHHHHHHHHHHHHHHHHHHHHHh---------CCCeEEEEechhhcCcCCCCCCcCccCCC
Confidence            999999985321    23456788999999999888876542         24589999997654322222233322222


Q ss_pred             CCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcc
Q 025509          161 SGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNII  209 (251)
Q Consensus       161 ~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~  209 (251)
                      .+......|+.+|.+.+.+++.++.+.   |  +++..+.|+.+.++..
T Consensus       133 ~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~--~~~~ilR~~~~~G~~~  176 (328)
T TIGR03466       133 SLDDMIGHYKRSKFLAEQAALEMAAEK---G--LPVVIVNPSTPIGPRD  176 (328)
T ss_pred             CcccccChHHHHHHHHHHHHHHHHHhc---C--CCEEEEeCCccCCCCC
Confidence            222234589999999999888876653   5  7778899999887653

The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene.

>PRK10084 dTDP-glucose 4,6 dehydratase; Provisional

Probab=99.76  E-value=5.4e-17  Score=141.83  Aligned_cols=192  Identities=14%  Similarity=0.079  Sum_probs=128.9

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCE-EEEEecCc--hhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcC
Q 025509            1 MDIVITGATSGIGTETARVLALRGVH-VVMGVRDI--AAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQH   77 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~-Vi~~~r~~--~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~   77 (251)
                      |+||||||+|+||++++++|+++|++ |+.+++..  ...+.    +....++..+.++.+|++|.+++.+++++.    
T Consensus         1 mkilITGgtG~iG~~l~~~L~~~g~~~v~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~----   72 (352)
T PRK10084          1 MKILVTGGAGFIGSAVVRHIINNTQDSVVNVDKLTYAGNLES----LADVSDSERYVFEHADICDRAELDRIFAQH----   72 (352)
T ss_pred             CeEEEECCCcHHhHHHHHHHHHhCCCeEEEecCCCccchHHH----HHhcccCCceEEEEecCCCHHHHHHHHHhc----
Confidence            57999999999999999999999976 55555432  11111    111112345788899999999999888752    


Q ss_pred             CCeeEEEEcCCCCCCCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCcccccccc--CCc---
Q 025509           78 HQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYH--EGI---  152 (251)
Q Consensus        78 g~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~--~~~---  152 (251)
                       ++|+|||+|+....  ..+.++.+..+++|+.++..+++++.+++....+..+...++|++||........  .+.   
T Consensus        73 -~~d~vih~A~~~~~--~~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~  149 (352)
T PRK10084         73 -QPDAVMHLAAESHV--DRSITGPAAFIETNIVGTYVLLEAARNYWSALDEDKKNAFRFHHISTDEVYGDLPHPDEVENS  149 (352)
T ss_pred             -CCCEEEECCcccCC--cchhcCchhhhhhhhHHHHHHHHHHHHhccccccccccceeEEEecchhhcCCCCcccccccc
Confidence             79999999996432  1123345778999999999999999887532110001134899999865432110  100   


Q ss_pred             cc-ccCCCCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCc
Q 025509          153 RF-DKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNI  208 (251)
Q Consensus       153 ~~-~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~  208 (251)
                      .. ..+++..+..+...|+.+|.+.+.+++.++.+++     +.+..+.|+.+..|.
T Consensus       150 ~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~g-----~~~vilr~~~v~Gp~  201 (352)
T PRK10084        150 EELPLFTETTAYAPSSPYSASKASSDHLVRAWLRTYG-----LPTIVTNCSNNYGPY  201 (352)
T ss_pred             ccCCCccccCCCCCCChhHHHHHHHHHHHHHHHHHhC-----CCEEEEeccceeCCC
Confidence            00 0122233444556899999999999999887764     455557888887775

>PRK10675 UDP-galactose-4-epimerase; Provisional

Probab=99.76  E-value=8.4e-17  Score=139.75  Aligned_cols=182  Identities=18%  Similarity=0.139  Sum_probs=123.9

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      |++|||||+|+||++++++|+++|++|++++|...........+.+ ..+..+.++.+|+++.+++.++++.     .++
T Consensus         1 m~vlVtGatG~iG~~l~~~L~~~g~~V~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~Dl~d~~~~~~~~~~-----~~~   74 (338)
T PRK10675          1 MRVLVTGGSGYIGSHTCVQLLQNGHDVVILDNLCNSKRSVLPVIER-LGGKHPTFVEGDIRNEALLTEILHD-----HAI   74 (338)
T ss_pred             CeEEEECCCChHHHHHHHHHHHCCCeEEEEecCCCchHhHHHHHHH-hcCCCceEEEccCCCHHHHHHHHhc-----CCC
Confidence            6799999999999999999999999999887653333322222222 1234577889999999998887764     379


Q ss_pred             eEEEEcCCCCCCCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccccCCCC
Q 025509           81 NILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDP  160 (251)
Q Consensus        81 d~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~  160 (251)
                      |+|||+|+.....  ...+.....+++|+.++..+++++...         +.++||++||.... +.....+   +++.
T Consensus        75 d~vvh~a~~~~~~--~~~~~~~~~~~~n~~~~~~l~~~~~~~---------~~~~~v~~Ss~~~y-g~~~~~~---~~E~  139 (338)
T PRK10675         75 DTVIHFAGLKAVG--ESVQKPLEYYDNNVNGTLRLISAMRAA---------NVKNLIFSSSATVY-GDQPKIP---YVES  139 (338)
T ss_pred             CEEEECCcccccc--chhhCHHHHHHHHHHHHHHHHHHHHHc---------CCCEEEEeccHHhh-CCCCCCc---cccc
Confidence            9999999865321  122345678999999999888765322         24589999996533 2211112   2222


Q ss_pred             CCC-CcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCC
Q 025509          161 SGY-NGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATN  207 (251)
Q Consensus       161 ~~~-~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~  207 (251)
                      .+. .+...|+.+|.+.+.+++.++.+...    +++..+.|+.+.++
T Consensus       140 ~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~----~~~~ilR~~~v~g~  183 (338)
T PRK10675        140 FPTGTPQSPYGKSKLMVEQILTDLQKAQPD----WSIALLRYFNPVGA  183 (338)
T ss_pred             cCCCCCCChhHHHHHHHHHHHHHHHHhcCC----CcEEEEEeeeecCC
Confidence            222 23578999999999999998766432    45555666555543

>PRK15181 Vi polysaccharide biosynthesis protein TviC; Provisional

Probab=99.76  E-value=5.1e-17  Score=141.97  Aligned_cols=183  Identities=13%  Similarity=0.070  Sum_probs=128.7

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCC---CCceEEEEecCCCHHHHHHHHHHHHhcC
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIP---SAKVDAMELDLSSLASVRNFASEYNIQH   77 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~---~~~v~~~~~D~~~~~~i~~~~~~~~~~~   77 (251)
                      |+||||||+|.||.+++++|.++|++|++++|................+   ...+.++.+|+.+.+++..+++      
T Consensus        16 ~~vlVtGatGfiG~~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~l~~~~~------   89 (348)
T PRK15181         16 KRWLITGVAGFIGSGLLEELLFLNQTVIGLDNFSTGYQHNLDDVRTSVSEEQWSRFIFIQGDIRKFTDCQKACK------   89 (348)
T ss_pred             CEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCCCcchhhhhhhhhccccccCCceEEEEccCCCHHHHHHHhh------
Confidence            5799999999999999999999999999999865432222222211111   1357889999999888877665      


Q ss_pred             CCeeEEEEcCCCCCCCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccccC
Q 025509           78 HQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKI  157 (251)
Q Consensus        78 g~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~  157 (251)
                       .+|+|||.|+.....  .+.++....+++|+.++..+++++...         +..++|++||...... ..+.+..  
T Consensus        90 -~~d~ViHlAa~~~~~--~~~~~~~~~~~~Nv~gt~nll~~~~~~---------~~~~~v~~SS~~vyg~-~~~~~~~--  154 (348)
T PRK15181         90 -NVDYVLHQAALGSVP--RSLKDPIATNSANIDGFLNMLTAARDA---------HVSSFTYAASSSTYGD-HPDLPKI--  154 (348)
T ss_pred             -CCCEEEECccccCch--hhhhCHHHHHHHHHHHHHHHHHHHHHc---------CCCeEEEeechHhhCC-CCCCCCC--
Confidence             489999999964432  133445677999999999999887543         2348999998754432 1122221  


Q ss_pred             CCCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCccc
Q 025509          158 NDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIR  210 (251)
Q Consensus       158 ~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~  210 (251)
                       ++.+..+..+|+.+|.+.+.+++.++.++   |  +++..+.|+.+..|...
T Consensus       155 -e~~~~~p~~~Y~~sK~~~e~~~~~~~~~~---~--~~~~~lR~~~vyGp~~~  201 (348)
T PRK15181        155 -EERIGRPLSPYAVTKYVNELYADVFARSY---E--FNAIGLRYFNVFGRRQN  201 (348)
T ss_pred             -CCCCCCCCChhhHHHHHHHHHHHHHHHHh---C--CCEEEEEecceeCcCCC
Confidence             12222344589999999998877765543   4  77888999999998643

>PF02719 Polysacc_synt_2: Polysaccharide biosynthesis protein; InterPro: IPR003869 This domain is found in diverse bacterial polysaccharide biosynthesis proteins including the CapD protein from Staphylococcus aureus [], the WalL protein, mannosyl-transferase [], and several putative epimerases

Probab=99.74  E-value=7e-18  Score=141.19  Aligned_cols=169  Identities=20%  Similarity=0.222  Sum_probs=125.2

Q ss_pred             EEEECCCChhHHHHHHHHHHcCC-EEEEEecCchhHHHHHHHHHhhCCCCceE----EEEecCCCHHHHHHHHHHHHhcC
Q 025509            3 IVITGATSGIGTETARVLALRGV-HVVMGVRDIAAGKDVKETIVKEIPSAKVD----AMELDLSSLASVRNFASEYNIQH   77 (251)
Q Consensus         3 vlItG~s~gIG~a~a~~l~~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~----~~~~D~~~~~~i~~~~~~~~~~~   77 (251)
                      ||||||+|.||++++++|++.+- +++++++++.++-++..++.+.+++.++.    .+.+|++|.+.+.+++++.    
T Consensus         1 VLVTGa~GSIGseL~rql~~~~p~~lil~d~~E~~l~~l~~~l~~~~~~~~v~~~~~~vigDvrd~~~l~~~~~~~----   76 (293)
T PF02719_consen    1 VLVTGAGGSIGSELVRQLLRYGPKKLILFDRDENKLYELERELRSRFPDPKVRFEIVPVIGDVRDKERLNRIFEEY----   76 (293)
T ss_dssp             EEEETTTSHHHHHHHHHHHCCB-SEEEEEES-HHHHHHHHHHCHHHC--TTCEEEEE--CTSCCHHHHHHHHTT------
T ss_pred             CEEEccccHHHHHHHHHHHhcCCCeEEEeCCChhHHHHHHHHHhhcccccCcccccCceeecccCHHHHHHHHhhc----
Confidence            79999999999999999999885 89999999999999999887766554443    4578999999999888764    


Q ss_pred             CCeeEEEEcCCCCCCCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccccC
Q 025509           78 HQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKI  157 (251)
Q Consensus        78 g~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~  157 (251)
                       ++|+|+|.|+.-.-+  +-++.+.+.+++|+.|+.++++++..+-.         .++|++|+.-+..           
T Consensus        77 -~pdiVfHaAA~KhVp--l~E~~p~eav~tNv~GT~nv~~aa~~~~v---------~~~v~ISTDKAv~-----------  133 (293)
T PF02719_consen   77 -KPDIVFHAAALKHVP--LMEDNPFEAVKTNVLGTQNVAEAAIEHGV---------ERFVFISTDKAVN-----------  133 (293)
T ss_dssp             -T-SEEEE------HH--HHCCCHHHHHHHHCHHHHHHHHHHHHTT----------SEEEEEEECGCSS-----------
T ss_pred             -CCCEEEEChhcCCCC--hHHhCHHHHHHHHHHHHHHHHHHHHHcCC---------CEEEEccccccCC-----------
Confidence             899999999964421  12345778899999999999999988743         3899999965432           


Q ss_pred             CCCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCC
Q 025509          158 NDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATN  207 (251)
Q Consensus       158 ~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~  207 (251)
                             +...|++||.-.+.+.++.+......+  .++.+|.=|+|...
T Consensus       134 -------PtnvmGatKrlaE~l~~~~~~~~~~~~--t~f~~VRFGNVlgS  174 (293)
T PF02719_consen  134 -------PTNVMGATKRLAEKLVQAANQYSGNSD--TKFSSVRFGNVLGS  174 (293)
T ss_dssp             ---------SHHHHHHHHHHHHHHHHCCTSSSS----EEEEEEE-EETTG
T ss_pred             -------CCcHHHHHHHHHHHHHHHHhhhCCCCC--cEEEEEEecceecC
Confidence                   446899999999999999988886666  78888988888653

The CapD protein is required for biosynthesis of type 1 capsular polysaccharide.; GO: 0009058 biosynthetic process; PDB: 3PVZ_C 2GN8_B 2GN4_A 2GNA_B 2GN6_A 2GN9_A.

>COG1086 Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=99.73  E-value=1.8e-16  Score=141.14  Aligned_cols=174  Identities=16%  Similarity=0.143  Sum_probs=147.0

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCC-EEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCC
Q 025509            1 MDIVITGATSGIGTETARVLALRGV-HVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQ   79 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~   79 (251)
                      |+||||||+|.||+++++++++.+. ++++.+|++.+.-++..++.+.+|..+..++.+|+.|.+.+.++++..     +
T Consensus       251 K~vLVTGagGSiGsel~~qil~~~p~~i~l~~~~E~~~~~i~~el~~~~~~~~~~~~igdVrD~~~~~~~~~~~-----k  325 (588)
T COG1086         251 KTVLVTGGGGSIGSELCRQILKFNPKEIILFSRDEYKLYLIDMELREKFPELKLRFYIGDVRDRDRVERAMEGH-----K  325 (588)
T ss_pred             CEEEEeCCCCcHHHHHHHHHHhcCCCEEEEecCchHHHHHHHHHHHhhCCCcceEEEecccccHHHHHHHHhcC-----C
Confidence            7899999999999999999999886 799999999999999999999888788999999999999999988853     7


Q ss_pred             eeEEEEcCCCCCCCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccccCCC
Q 025509           80 LNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKIND  159 (251)
Q Consensus        80 id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~  159 (251)
                      +|+|+|.|+.-+-+.  =+..+.+.+.+|++|+.+++.++...-.+         ++|++|+.-+..             
T Consensus       326 vd~VfHAAA~KHVPl--~E~nP~Eai~tNV~GT~nv~~aa~~~~V~---------~~V~iSTDKAV~-------------  381 (588)
T COG1086         326 VDIVFHAAALKHVPL--VEYNPEEAIKTNVLGTENVAEAAIKNGVK---------KFVLISTDKAVN-------------  381 (588)
T ss_pred             CceEEEhhhhccCcc--hhcCHHHHHHHhhHhHHHHHHHHHHhCCC---------EEEEEecCcccC-------------
Confidence            999999999654221  23456778999999999999999887544         899999965543             


Q ss_pred             CCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCccc
Q 025509          160 PSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIR  210 (251)
Q Consensus       160 ~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~  210 (251)
                           +-..|+++|...+.+.++++......+  -++..|.=|+|...--.
T Consensus       382 -----PtNvmGaTKr~aE~~~~a~~~~~~~~~--T~f~~VRFGNVlGSrGS  425 (588)
T COG1086         382 -----PTNVMGATKRLAEKLFQAANRNVSGTG--TRFCVVRFGNVLGSRGS  425 (588)
T ss_pred             -----CchHhhHHHHHHHHHHHHHhhccCCCC--cEEEEEEecceecCCCC
Confidence                 345899999999999999999877655  67888999988765433

>PF01370 Epimerase: NAD dependent epimerase/dehydratase family; InterPro: IPR001509 This family of proteins utilise NAD as a cofactor

Probab=99.73  E-value=8.2e-16  Score=126.51  Aligned_cols=174  Identities=22%  Similarity=0.209  Sum_probs=132.8

Q ss_pred             EEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCeeE
Q 025509            3 IVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQLNI   82 (251)
Q Consensus         3 vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~id~   82 (251)
                      ||||||+|.||.+++++|.++|+.|+...|+..........       ..+.++.+|+.+.++++++++..     .+|.
T Consensus         1 IlI~GatG~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~-------~~~~~~~~dl~~~~~~~~~~~~~-----~~d~   68 (236)
T PF01370_consen    1 ILITGATGFIGSALVRQLLKKGHEVIVLSRSSNSESFEEKK-------LNVEFVIGDLTDKEQLEKLLEKA-----NIDV   68 (236)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTTEEEEEESCSTGGHHHHHH-------TTEEEEESETTSHHHHHHHHHHH-----TESE
T ss_pred             EEEEccCCHHHHHHHHHHHHcCCcccccccccccccccccc-------ceEEEEEeecccccccccccccc-----CceE
Confidence            79999999999999999999999988888776553332221       27899999999999999999976     7999


Q ss_pred             EEEcCCCCCCCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccccCCCCCC
Q 025509           83 LINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSG  162 (251)
Q Consensus        83 lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~  162 (251)
                      |||+|+...  ...+.++....++.|+.++..+++++...-         ..++|++||.... +.....+++   +..+
T Consensus        69 vi~~a~~~~--~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~---------~~~~i~~sS~~~y-~~~~~~~~~---e~~~  133 (236)
T PF01370_consen   69 VIHLAAFSS--NPESFEDPEEIIEANVQGTRNLLEAAREAG---------VKRFIFLSSASVY-GDPDGEPID---EDSP  133 (236)
T ss_dssp             EEEEBSSSS--HHHHHHSHHHHHHHHHHHHHHHHHHHHHHT---------TSEEEEEEEGGGG-TSSSSSSBE---TTSG
T ss_pred             EEEeecccc--cccccccccccccccccccccccccccccc---------ccccccccccccc-ccccccccc---cccc
Confidence            999999643  112335677889999998888888776552         3599999995433 322233332   2333


Q ss_pred             CCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCc
Q 025509          163 YNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNI  208 (251)
Q Consensus       163 ~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~  208 (251)
                      ..+...|+.+|...+.+.+.+..+.   +  +++..+.|+.+..+.
T Consensus       134 ~~~~~~Y~~~K~~~e~~~~~~~~~~---~--~~~~~~R~~~vyG~~  174 (236)
T PF01370_consen  134 INPLSPYGASKRAAEELLRDYAKKY---G--LRVTILRPPNVYGPG  174 (236)
T ss_dssp             CCHSSHHHHHHHHHHHHHHHHHHHH---T--SEEEEEEESEEESTT
T ss_pred             ccccccccccccccccccccccccc---c--ccccccccccccccc
Confidence            3456679999999999988888776   4  788889999999998

The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions []. It contains the NAD(P)- binding domain (IPR016040 from INTERPRO) which is a commonly found domain with a core Rossmann-type fold. One of the best studied of these proteins is UDP-galactose 4-epimerase which catalyses the conversion of UDP-galactose to UDP-glucose during galactose metabolism [, ].; GO: 0003824 catalytic activity, 0050662 coenzyme binding, 0044237 cellular metabolic process; PDB: 2NNL_D 3C1T_B 3BXX_C 2IOD_C 2X4G_A 2Q1W_B 3SLG_B 1R66_A 1R6D_A 1KEU_B ....

>PLN02686 cinnamoyl-CoA reductase

Probab=99.72  E-value=5.7e-16  Score=136.27  Aligned_cols=187  Identities=12%  Similarity=0.022  Sum_probs=126.4

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhC----CCCceEEEEecCCCHHHHHHHHHHHHhc
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEI----PSAKVDAMELDLSSLASVRNFASEYNIQ   76 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~----~~~~v~~~~~D~~~~~~i~~~~~~~~~~   76 (251)
                      |+||||||+|+||++++++|+++|++|+++.|+......+ ..+....    .+..+.++.+|++|.+++.++++     
T Consensus        54 k~VLVTGatGfIG~~lv~~L~~~G~~V~~~~r~~~~~~~l-~~l~~~~~~~~~~~~~~~v~~Dl~d~~~l~~~i~-----  127 (367)
T PLN02686         54 RLVCVTGGVSFLGLAIVDRLLRHGYSVRIAVDTQEDKEKL-REMEMFGEMGRSNDGIWTVMANLTEPESLHEAFD-----  127 (367)
T ss_pred             CEEEEECCchHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-HHHhhhccccccCCceEEEEcCCCCHHHHHHHHH-----
Confidence            5799999999999999999999999999888876554443 2221100    01257889999999999888776     


Q ss_pred             CCCeeEEEEcCCCCCCCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccc-cccc--cCC--
Q 025509           77 HHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGH-RLAY--HEG--  151 (251)
Q Consensus        77 ~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~-~~~~--~~~--  151 (251)
                        .+|.++|.|+...+....  .......++|+.++..+++++...-        +-.++|++||.++ .++.  ..+  
T Consensus       128 --~~d~V~hlA~~~~~~~~~--~~~~~~~~~nv~gt~~llea~~~~~--------~v~r~V~~SS~~~~vyg~~~~~~~~  195 (367)
T PLN02686        128 --GCAGVFHTSAFVDPAGLS--GYTKSMAELEAKASENVIEACVRTE--------SVRKCVFTSSLLACVWRQNYPHDLP  195 (367)
T ss_pred             --hccEEEecCeeecccccc--cccchhhhhhHHHHHHHHHHHHhcC--------CccEEEEeccHHHhcccccCCCCCC
Confidence              468999999865331111  1123456789999988888865431        1248999999742 2211  111  


Q ss_pred             cccccCC---CCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCccc
Q 025509          152 IRFDKIN---DPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIR  210 (251)
Q Consensus       152 ~~~~~~~---~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~  210 (251)
                      ...++-.   ...+.....+|+.||.+.+.+++.++.+   .|  ++++.++|++|.+|...
T Consensus       196 ~~i~E~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~g--l~~v~lRp~~vyGp~~~  252 (367)
T PLN02686        196 PVIDEESWSDESFCRDNKLWYALGKLKAEKAAWRAARG---KG--LKLATICPALVTGPGFF  252 (367)
T ss_pred             cccCCCCCCChhhcccccchHHHHHHHHHHHHHHHHHh---cC--ceEEEEcCCceECCCCC
Confidence            1111100   0012223457999999999988877665   35  89999999999999643

>TIGR01179 galE UDP-glucose-4-epimerase

Probab=99.71  E-value=7.5e-16  Score=132.63  Aligned_cols=180  Identities=21%  Similarity=0.209  Sum_probs=126.6

Q ss_pred             EEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCee
Q 025509            2 DIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQLN   81 (251)
Q Consensus         2 ~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~id   81 (251)
                      +||||||+|+||.+++++|.++|++|++++|...........+.+   ...+.++.+|+++.+++.++++.     +++|
T Consensus         1 kvlV~GatG~iG~~l~~~l~~~g~~V~~~~~~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~-----~~~d   72 (328)
T TIGR01179         1 KILVTGGAGYIGSHTVRQLLESGHEVVVLDNLSNGSPEALKRGER---ITRVTFVEGDLRDRELLDRLFEE-----HKID   72 (328)
T ss_pred             CEEEeCCCCHHHHHHHHHHHhCCCeEEEEeCCCccchhhhhhhcc---ccceEEEECCCCCHHHHHHHHHh-----CCCc
Confidence            489999999999999999999999998887643332222222211   11577889999999999988774     3799


Q ss_pred             EEEEcCCCCCCCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccccCCCCC
Q 025509           82 ILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPS  161 (251)
Q Consensus        82 ~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~  161 (251)
                      ++|||||......  ..++..+.++.|+.++..+++++.+.         +..++|++||.... +......   +++..
T Consensus        73 ~vv~~ag~~~~~~--~~~~~~~~~~~n~~~~~~l~~~~~~~---------~~~~~v~~ss~~~~-g~~~~~~---~~e~~  137 (328)
T TIGR01179        73 AVIHFAGLIAVGE--SVQDPLKYYRNNVVNTLNLLEAMQQT---------GVKKFIFSSSAAVY-GEPSSIP---ISEDS  137 (328)
T ss_pred             EEEECccccCcch--hhcCchhhhhhhHHHHHHHHHHHHhc---------CCCEEEEecchhhc-CCCCCCC---ccccC
Confidence            9999999653221  23345667899999999988875432         23589999886533 2222212   22233


Q ss_pred             CCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCc
Q 025509          162 GYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNI  208 (251)
Q Consensus       162 ~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~  208 (251)
                      +..+...|+.+|++++.+++.++.+.  .+  +++..+.|+.+..+.
T Consensus       138 ~~~~~~~y~~sK~~~e~~~~~~~~~~--~~--~~~~ilR~~~v~g~~  180 (328)
T TIGR01179       138 PLGPINPYGRSKLMSERILRDLSKAD--PG--LSYVILRYFNVAGAD  180 (328)
T ss_pred             CCCCCCchHHHHHHHHHHHHHHHHhc--cC--CCEEEEecCcccCCC
Confidence            44455689999999999999887653  24  677779998888764

This enzyme interconverts UDP-glucose and UDP-galactose. A set of related proteins, some of which are tentatively identified as UDP-glucose-4-epimerase in Thermotoga maritima, Bacillus halodurans, and several archaea, but deeply branched from this set and lacking experimental evidence, are excluded from this model and described separately.

>PLN00141 Tic62-NAD(P)-related group II protein; Provisional

Probab=99.68  E-value=2.8e-15  Score=125.15  Aligned_cols=168  Identities=21%  Similarity=0.239  Sum_probs=109.1

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCH-HHHHHHHHHHHhcCCC
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSL-ASVRNFASEYNIQHHQ   79 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~-~~i~~~~~~~~~~~g~   79 (251)
                      |++|||||+|+||++++++|++.|++|++..|+.++.....    ..  +..+.++.+|+++. +++.   +.+.   .+
T Consensus        18 ~~ilItGasG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~----~~--~~~~~~~~~Dl~d~~~~l~---~~~~---~~   85 (251)
T PLN00141         18 KTVFVAGATGRTGKRIVEQLLAKGFAVKAGVRDVDKAKTSL----PQ--DPSLQIVRADVTEGSDKLV---EAIG---DD   85 (251)
T ss_pred             CeEEEECCCcHHHHHHHHHHHhCCCEEEEEecCHHHHHHhc----cc--CCceEEEEeeCCCCHHHHH---HHhh---cC
Confidence            57999999999999999999999999999999876543321    11  23688899999973 3332   2221   26


Q ss_pred             eeEEEEcCCCCCCCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccccCCC
Q 025509           80 LNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKIND  159 (251)
Q Consensus        80 id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~  159 (251)
                      +|+||+|+|......  +.    ..+++|+.++..+++++.    ++     +.++||++||.+..... .         
T Consensus        86 ~d~vi~~~g~~~~~~--~~----~~~~~n~~~~~~ll~a~~----~~-----~~~~iV~iSS~~v~g~~-~---------  140 (251)
T PLN00141         86 SDAVICATGFRRSFD--PF----APWKVDNFGTVNLVEACR----KA-----GVTRFILVSSILVNGAA-M---------  140 (251)
T ss_pred             CCEEEECCCCCcCCC--CC----CceeeehHHHHHHHHHHH----Hc-----CCCEEEEEccccccCCC-c---------
Confidence            999999998642211  11    124678888888877763    22     35799999997643210 0         


Q ss_pred             CCCCCcccccchhHHHHHHHHHHHHHH--hccCCCcEEEEEeeCCcccCCcc
Q 025509          160 PSGYNGFRAYSQSKLANILHANELARR--LKEDGVDITANSVHPGAIATNII  209 (251)
Q Consensus       160 ~~~~~~~~~Y~~sK~a~~~~~~~la~e--~~~~g~~i~v~~v~Pg~v~t~~~  209 (251)
                        +.+....|...|.....+...+..|  +...|  ++++.|.||++.++..
T Consensus       141 --~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~~g--i~~~iirpg~~~~~~~  188 (251)
T PLN00141        141 --GQILNPAYIFLNLFGLTLVAKLQAEKYIRKSG--INYTIVRPGGLTNDPP  188 (251)
T ss_pred             --ccccCcchhHHHHHHHHHHHHHHHHHHHHhcC--CcEEEEECCCccCCCC
Confidence              1112234655554433333223333  45567  8999999999987653

>PLN02427 UDP-apiose/xylose synthase

Probab=99.68  E-value=1.6e-15  Score=134.36  Aligned_cols=183  Identities=13%  Similarity=0.069  Sum_probs=120.7

Q ss_pred             CEEEEECCCChhHHHHHHHHHHc-CCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCC
Q 025509            1 MDIVITGATSGIGTETARVLALR-GVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQ   79 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~-G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~   79 (251)
                      |+||||||+|.||++++++|+++ |++|++++|+..+............ ...+.++.+|++|.+.+.++++       .
T Consensus        15 ~~VlVTGgtGfIGs~lv~~L~~~~g~~V~~l~r~~~~~~~l~~~~~~~~-~~~~~~~~~Dl~d~~~l~~~~~-------~   86 (386)
T PLN02427         15 LTICMIGAGGFIGSHLCEKLMTETPHKVLALDVYNDKIKHLLEPDTVPW-SGRIQFHRINIKHDSRLEGLIK-------M   86 (386)
T ss_pred             cEEEEECCcchHHHHHHHHHHhcCCCEEEEEecCchhhhhhhccccccC-CCCeEEEEcCCCChHHHHHHhh-------c
Confidence            57999999999999999999998 5899999987654332211100001 2368999999999988887665       4


Q ss_pred             eeEEEEcCCCCCCCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCC------cc
Q 025509           80 LNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEG------IR  153 (251)
Q Consensus        80 id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~------~~  153 (251)
                      +|+|||+|+...+..  ..++..+.+..|+.++..+++++...          +.++|++||...+ +....      .+
T Consensus        87 ~d~ViHlAa~~~~~~--~~~~~~~~~~~n~~gt~~ll~aa~~~----------~~r~v~~SS~~vY-g~~~~~~~~e~~p  153 (386)
T PLN02427         87 ADLTINLAAICTPAD--YNTRPLDTIYSNFIDALPVVKYCSEN----------NKRLIHFSTCEVY-GKTIGSFLPKDHP  153 (386)
T ss_pred             CCEEEEcccccChhh--hhhChHHHHHHHHHHHHHHHHHHHhc----------CCEEEEEeeeeee-CCCcCCCCCcccc
Confidence            799999999654311  11223445678999998888776432          2489999997543 22111      11


Q ss_pred             ccc------CCCCC-C------CCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcc
Q 025509          154 FDK------INDPS-G------YNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNII  209 (251)
Q Consensus       154 ~~~------~~~~~-~------~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~  209 (251)
                      ..+      +.+.. +      ......|+.+|.+.+.+++.++..   .|  +.+..+.|+.|..|..
T Consensus       154 ~~~~~~~~~~~e~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~g--~~~~ilR~~~vyGp~~  217 (386)
T PLN02427        154 LRQDPAFYVLKEDESPCIFGSIEKQRWSYACAKQLIERLIYAEGAE---NG--LEFTIVRPFNWIGPRM  217 (386)
T ss_pred             cccccccccccccccccccCCCCccccchHHHHHHHHHHHHHHHhh---cC--CceEEecccceeCCCC
Confidence            000      00000 0      012347999999998877665433   35  7778899999998863

>PRK11908 NAD-dependent epimerase/dehydratase family protein; Provisional

Probab=99.67  E-value=3.5e-15  Score=130.29  Aligned_cols=177  Identities=11%  Similarity=0.040  Sum_probs=120.3

Q ss_pred             CEEEEECCCChhHHHHHHHHHHc-CCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCC-CHHHHHHHHHHHHhcCC
Q 025509            1 MDIVITGATSGIGTETARVLALR-GVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLS-SLASVRNFASEYNIQHH   78 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~-G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~-~~~~i~~~~~~~~~~~g   78 (251)
                      |+||||||+|.||++++++|++. |++|++++|+......    +   .+...+.++.+|++ +.+.+.++++       
T Consensus         2 ~~ilVtGatGfiGs~l~~~L~~~~~~~V~~~~r~~~~~~~----~---~~~~~~~~~~~Dl~~~~~~~~~~~~-------   67 (347)
T PRK11908          2 KKVLILGVNGFIGHHLSKRILETTDWEVYGMDMQTDRLGD----L---VNHPRMHFFEGDITINKEWIEYHVK-------   67 (347)
T ss_pred             cEEEEECCCcHHHHHHHHHHHhCCCCeEEEEeCcHHHHHH----h---ccCCCeEEEeCCCCCCHHHHHHHHc-------
Confidence            57999999999999999999986 6999999986543221    1   11345889999998 6666555433       


Q ss_pred             CeeEEEEcCCCCCCCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccccCC
Q 025509           79 QLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKIN  158 (251)
Q Consensus        79 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~  158 (251)
                      ++|+|||+|+...+..  ..++.+..+++|+.++..+++++...          +.++|++||.... +...+.++.+-.
T Consensus        68 ~~d~ViH~aa~~~~~~--~~~~p~~~~~~n~~~~~~ll~aa~~~----------~~~~v~~SS~~vy-g~~~~~~~~ee~  134 (347)
T PRK11908         68 KCDVILPLVAIATPAT--YVKQPLRVFELDFEANLPIVRSAVKY----------GKHLVFPSTSEVY-GMCPDEEFDPEA  134 (347)
T ss_pred             CCCEEEECcccCChHH--hhcCcHHHHHHHHHHHHHHHHHHHhc----------CCeEEEEecceee-ccCCCcCcCccc
Confidence            5899999999644321  22345677899999998888776532          2489999997543 222222222111


Q ss_pred             CC---CC-CCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcc
Q 025509          159 DP---SG-YNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNII  209 (251)
Q Consensus       159 ~~---~~-~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~  209 (251)
                      .+   .+ ..+...|+.+|.+.+...+.++...   |  +.+..+.|+.+..|..
T Consensus       135 ~~~~~~~~~~p~~~Y~~sK~~~e~~~~~~~~~~---~--~~~~ilR~~~v~Gp~~  184 (347)
T PRK11908        135 SPLVYGPINKPRWIYACSKQLMDRVIWAYGMEE---G--LNFTLFRPFNWIGPGL  184 (347)
T ss_pred             cccccCcCCCccchHHHHHHHHHHHHHHHHHHc---C--CCeEEEeeeeeeCCCc
Confidence            10   01 1233479999999988887776543   4  5666699998888753

>COG0451 WcaG Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=99.66  E-value=3.4e-15  Score=127.94  Aligned_cols=179  Identities=20%  Similarity=0.130  Sum_probs=126.7

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      +.||||||+|.||++++++|.++|++|+.++|.........         ..+.++.+|+++.+.+...++..     . 
T Consensus         1 ~~ILVtG~tGfiG~~l~~~L~~~g~~V~~~~r~~~~~~~~~---------~~~~~~~~d~~~~~~~~~~~~~~-----~-   65 (314)
T COG0451           1 MRILVTGGAGFIGSHLVERLLAAGHDVRGLDRLRDGLDPLL---------SGVEFVVLDLTDRDLVDELAKGV-----P-   65 (314)
T ss_pred             CeEEEEcCcccHHHHHHHHHHhCCCeEEEEeCCCccccccc---------cccceeeecccchHHHHHHHhcC-----C-
Confidence            46999999999999999999999999999999765533221         25788899999885555544421     2 


Q ss_pred             eEEEEcCCCCCCCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccccCCCC
Q 025509           81 NILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDP  160 (251)
Q Consensus        81 d~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~  160 (251)
                      |++||+|+.......... +....+++|+.++..+++++...         +..++|+.||.+.......+.+   +++.
T Consensus        66 d~vih~aa~~~~~~~~~~-~~~~~~~~nv~gt~~ll~aa~~~---------~~~~~v~~ss~~~~~~~~~~~~---~~E~  132 (314)
T COG0451          66 DAVIHLAAQSSVPDSNAS-DPAEFLDVNVDGTLNLLEAARAA---------GVKRFVFASSVSVVYGDPPPLP---IDED  132 (314)
T ss_pred             CEEEEccccCchhhhhhh-CHHHHHHHHHHHHHHHHHHHHHc---------CCCeEEEeCCCceECCCCCCCC---cccc
Confidence            999999997543222111 45678999999999999988772         2458999666554443211111   2222


Q ss_pred             -CCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCC
Q 025509          161 -SGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRHN  212 (251)
Q Consensus       161 -~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~~  212 (251)
                       .+..+..+|+.+|.+.+.+++....   ..|  +.+..+.|+.+..|.....
T Consensus       133 ~~~~~p~~~Yg~sK~~~E~~~~~~~~---~~~--~~~~ilR~~~vyGp~~~~~  180 (314)
T COG0451         133 LGPPRPLNPYGVSKLAAEQLLRAYAR---LYG--LPVVILRPFNVYGPGDKPD  180 (314)
T ss_pred             cCCCCCCCHHHHHHHHHHHHHHHHHH---HhC--CCeEEEeeeeeeCCCCCCC
Confidence             2222333799999999998888887   345  7777799999988876654

>PRK08125 bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase; Validated

Probab=99.65  E-value=5.6e-15  Score=139.16  Aligned_cols=177  Identities=14%  Similarity=0.041  Sum_probs=122.3

Q ss_pred             CEEEEECCCChhHHHHHHHHHHc-CCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHH-HHHHHHHHHhcCC
Q 025509            1 MDIVITGATSGIGTETARVLALR-GVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLAS-VRNFASEYNIQHH   78 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~-G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~-i~~~~~~~~~~~g   78 (251)
                      |+||||||+|.||++++++|+++ |++|+.++|........       .+...+.++.+|+++.++ ++++++       
T Consensus       316 ~~VLVTGatGFIGs~Lv~~Ll~~~g~~V~~l~r~~~~~~~~-------~~~~~~~~~~gDl~d~~~~l~~~l~-------  381 (660)
T PRK08125        316 TRVLILGVNGFIGNHLTERLLRDDNYEVYGLDIGSDAISRF-------LGHPRFHFVEGDISIHSEWIEYHIK-------  381 (660)
T ss_pred             CEEEEECCCchHHHHHHHHHHhCCCcEEEEEeCCchhhhhh-------cCCCceEEEeccccCcHHHHHHHhc-------
Confidence            57999999999999999999986 79999999976432211       112358889999998655 333332       


Q ss_pred             CeeEEEEcCCCCCCCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccccCC
Q 025509           79 QLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKIN  158 (251)
Q Consensus        79 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~  158 (251)
                      ++|+|||+|+...+..  ..++.+..+++|+.++..+++++...          +.++|++||.... +...+.++++-.
T Consensus       382 ~~D~ViHlAa~~~~~~--~~~~~~~~~~~Nv~~t~~ll~a~~~~----------~~~~V~~SS~~vy-g~~~~~~~~E~~  448 (660)
T PRK08125        382 KCDVVLPLVAIATPIE--YTRNPLRVFELDFEENLKIIRYCVKY----------NKRIIFPSTSEVY-GMCTDKYFDEDT  448 (660)
T ss_pred             CCCEEEECccccCchh--hccCHHHHHHhhHHHHHHHHHHHHhc----------CCeEEEEcchhhc-CCCCCCCcCccc
Confidence            5899999999754321  22345667899999999988887643          1489999997543 222222222211


Q ss_pred             CC---CCC-CcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcc
Q 025509          159 DP---SGY-NGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNII  209 (251)
Q Consensus       159 ~~---~~~-~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~  209 (251)
                      ..   .+. .....|+.||.+.+.+++.++..+   |  +++..+.|+.+..|..
T Consensus       449 ~~~~~~p~~~p~s~Yg~sK~~~E~~~~~~~~~~---g--~~~~ilR~~~vyGp~~  498 (660)
T PRK08125        449 SNLIVGPINKQRWIYSVSKQLLDRVIWAYGEKE---G--LRFTLFRPFNWMGPRL  498 (660)
T ss_pred             cccccCCCCCCccchHHHHHHHHHHHHHHHHhc---C--CceEEEEEceeeCCCc
Confidence            10   111 233579999999998888776554   4  6777799999988753

>PLN02695 GDP-D-mannose-3',5'-epimerase

Probab=99.65  E-value=1.2e-14  Score=127.98  Aligned_cols=177  Identities=18%  Similarity=0.149  Sum_probs=120.7

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      |+||||||+|.||++++++|.++|++|++++|.....      +...  .....++.+|+.+.+++..+++       ++
T Consensus        22 ~~IlVtGgtGfIG~~l~~~L~~~G~~V~~v~r~~~~~------~~~~--~~~~~~~~~Dl~d~~~~~~~~~-------~~   86 (370)
T PLN02695         22 LRICITGAGGFIASHIARRLKAEGHYIIASDWKKNEH------MSED--MFCHEFHLVDLRVMENCLKVTK-------GV   86 (370)
T ss_pred             CEEEEECCccHHHHHHHHHHHhCCCEEEEEEeccccc------cccc--cccceEEECCCCCHHHHHHHHh-------CC
Confidence            6799999999999999999999999999999864321      0000  1125678899999887766553       57


Q ss_pred             eEEEEcCCCCCCCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccC---CcccccC
Q 025509           81 NILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHE---GIRFDKI  157 (251)
Q Consensus        81 d~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~---~~~~~~~  157 (251)
                      |+|||+|+...... ....+....++.|+.++..+++++...         +..++|++||...+.....   +.++.+-
T Consensus        87 D~Vih~Aa~~~~~~-~~~~~~~~~~~~N~~~t~nll~aa~~~---------~vk~~V~~SS~~vYg~~~~~~~~~~~~E~  156 (370)
T PLN02695         87 DHVFNLAADMGGMG-FIQSNHSVIMYNNTMISFNMLEAARIN---------GVKRFFYASSACIYPEFKQLETNVSLKES  156 (370)
T ss_pred             CEEEEcccccCCcc-ccccCchhhHHHHHHHHHHHHHHHHHh---------CCCEEEEeCchhhcCCccccCcCCCcCcc
Confidence            99999998643211 111223456778999998888876433         2348999999654321111   0112110


Q ss_pred             CCCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCc
Q 025509          158 NDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNI  208 (251)
Q Consensus       158 ~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~  208 (251)
                       ...+..+...|+.+|.+.+.+++..+..+   |  +.+..+.|+.+..|.
T Consensus       157 -~~~p~~p~s~Yg~sK~~~E~~~~~~~~~~---g--~~~~ilR~~~vyGp~  201 (370)
T PLN02695        157 -DAWPAEPQDAYGLEKLATEELCKHYTKDF---G--IECRIGRFHNIYGPF  201 (370)
T ss_pred             -cCCCCCCCCHHHHHHHHHHHHHHHHHHHh---C--CCEEEEEECCccCCC
Confidence             01134456789999999998888776543   5  777789999999875

>PRK11150 rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Provisional

Probab=99.64  E-value=4.8e-15  Score=127.20  Aligned_cols=173  Identities=14%  Similarity=0.123  Sum_probs=114.8

Q ss_pred             EEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHh--cCCCe
Q 025509            3 IVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNI--QHHQL   80 (251)
Q Consensus         3 vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~--~~g~i   80 (251)
                      ||||||+|.||++++++|+++|++++++.|+.......            ..+..+|+.|..+.+.+++++..  .++++
T Consensus         2 ilVtGa~GfiG~~l~~~L~~~g~~~v~~~~~~~~~~~~------------~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~   69 (308)
T PRK11150          2 IIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKF------------VNLVDLDIADYMDKEDFLAQIMAGDDFGDI   69 (308)
T ss_pred             EEEecCCcHHHHHHHHHHHhCCCceEEEecCCCcchHH------------HhhhhhhhhhhhhHHHHHHHHhcccccCCc
Confidence            79999999999999999999999776666554322111            01123567666666655555432  34579


Q ss_pred             eEEEEcCCCCCCCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccccCCCC
Q 025509           81 NILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDP  160 (251)
Q Consensus        81 d~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~  160 (251)
                      |+|||+|+..... +  . +.+..++.|+.++..+++++...          +.++|++||.+... ...+.+   ..+.
T Consensus        70 d~Vih~A~~~~~~-~--~-~~~~~~~~n~~~t~~ll~~~~~~----------~~~~i~~SS~~vyg-~~~~~~---~~E~  131 (308)
T PRK11150         70 EAIFHEGACSSTT-E--W-DGKYMMDNNYQYSKELLHYCLER----------EIPFLYASSAATYG-GRTDDF---IEER  131 (308)
T ss_pred             cEEEECceecCCc-C--C-ChHHHHHHHHHHHHHHHHHHHHc----------CCcEEEEcchHHhC-cCCCCC---CccC
Confidence            9999999854321 1  1 23457899999999888887432          24799999976432 221111   2222


Q ss_pred             CCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCccc
Q 025509          161 SGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIR  210 (251)
Q Consensus       161 ~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~  210 (251)
                      .+..+...|+.+|.+.+.+++.++.+.   +  +.+..+.|+.+..+...
T Consensus       132 ~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~--~~~~~lR~~~vyG~~~~  176 (308)
T PRK11150        132 EYEKPLNVYGYSKFLFDEYVRQILPEA---N--SQICGFRYFNVYGPREG  176 (308)
T ss_pred             CCCCCCCHHHHHHHHHHHHHHHHHHHc---C--CCEEEEeeeeecCCCCC
Confidence            233345689999999988877765443   4  67777999999887543

>TIGR01746 Thioester-redct thioester reductase domain

Probab=99.64  E-value=1.4e-14  Score=126.47  Aligned_cols=179  Identities=21%  Similarity=0.193  Sum_probs=117.6

Q ss_pred             EEEEECCCChhHHHHHHHHHHcC--CEEEEEecCchhH---HHHHHHHHhhCC-----C-CceEEEEecCCCH------H
Q 025509            2 DIVITGATSGIGTETARVLALRG--VHVVMGVRDIAAG---KDVKETIVKEIP-----S-AKVDAMELDLSSL------A   64 (251)
Q Consensus         2 ~vlItG~s~gIG~a~a~~l~~~G--~~Vi~~~r~~~~~---~~~~~~~~~~~~-----~-~~v~~~~~D~~~~------~   64 (251)
                      +||||||+|+||++++++|+++|  ++|++..|+....   ++..+.+.....     . .++.++.+|++++      +
T Consensus         1 ~vlvtGatG~lG~~l~~~L~~~g~~~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~gl~~~   80 (367)
T TIGR01746         1 TVLLTGATGFLGAYLLEELLRRSTQAKVICLVRAASEEHAMERLREALRSYRLWQEDLARERIEVVAGDLSEPRLGLSDA   80 (367)
T ss_pred             CEEEeccchHHHHHHHHHHHhCCCCCEEEEEEccCCHHHHHHHHHHHHHHhCCCCchhhhCCEEEEeCCcCcccCCcCHH
Confidence            58999999999999999999998  6899999976532   122222221100     1 4689999999864      2


Q ss_pred             HHHHHHHHHHhcCCCeeEEEEcCCCCCCCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccc
Q 025509           65 SVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGH  144 (251)
Q Consensus        65 ~i~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~  144 (251)
                      ....+.       ..+|+|||||+....     ...++..+++|+.++..+++.+...         ...+++++||.+.
T Consensus        81 ~~~~~~-------~~~d~vih~a~~~~~-----~~~~~~~~~~nv~g~~~ll~~a~~~---------~~~~~v~iSS~~v  139 (367)
T TIGR01746        81 EWERLA-------ENVDTIVHNGALVNW-----VYPYSELRAANVLGTREVLRLAASG---------RAKPLHYVSTISV  139 (367)
T ss_pred             HHHHHH-------hhCCEEEeCCcEecc-----CCcHHHHhhhhhHHHHHHHHHHhhC---------CCceEEEEccccc
Confidence            333222       369999999996432     1235677889999998888776442         2346999999876


Q ss_pred             cccccCCc-ccccCCCCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCC
Q 025509          145 RLAYHEGI-RFDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATN  207 (251)
Q Consensus       145 ~~~~~~~~-~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~  207 (251)
                      ........ ...+............|+.+|.+.+.+.+.++.    .|  ++++.+.||.+.++
T Consensus       140 ~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~g--~~~~i~Rpg~v~G~  197 (367)
T TIGR01746       140 LAAIDLSTVTEDDAIVTPPPGLAGGYAQSKWVAELLVREASD----RG--LPVTIVRPGRILGN  197 (367)
T ss_pred             cCCcCCCCccccccccccccccCCChHHHHHHHHHHHHHHHh----cC--CCEEEECCCceeec
Confidence            53211100 000000001112245799999999887766543    36  88889999999876

It has been suggested that a NADP-binding motif can be found in the N-terminal portion of this domain that may form a Rossman-type fold.

>PLN02260 probable rhamnose biosynthetic enzyme

Probab=99.63  E-value=1.5e-14  Score=136.60  Aligned_cols=186  Identities=16%  Similarity=0.061  Sum_probs=125.1

Q ss_pred             CEEEEECCCChhHHHHHHHHHHc--CCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCC
Q 025509            1 MDIVITGATSGIGTETARVLALR--GVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHH   78 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~--G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g   78 (251)
                      |+||||||+|+||++++++|.++  |++|+..+|... ..+. ..+........+.++.+|+++.+.+.+++..     .
T Consensus         7 ~~VLVTGatGfIG~~lv~~Ll~~g~~~~V~~~d~~~~-~~~~-~~l~~~~~~~~v~~~~~Dl~d~~~~~~~~~~-----~   79 (668)
T PLN02260          7 KNILITGAAGFIASHVANRLIRNYPDYKIVVLDKLDY-CSNL-KNLNPSKSSPNFKFVKGDIASADLVNYLLIT-----E   79 (668)
T ss_pred             CEEEEECCCcHHHHHHHHHHHHhCCCCEEEEEeCCCc-cchh-hhhhhcccCCCeEEEECCCCChHHHHHHHhh-----c
Confidence            68999999999999999999987  678988887431 1111 1111111134688999999998887765532     2


Q ss_pred             CeeEEEEcCCCCCCCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccccCC
Q 025509           79 QLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKIN  158 (251)
Q Consensus        79 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~  158 (251)
                      ++|+|||+|+....  +.+.++....+++|+.++..+++++...-        ...++|++||...... ..........
T Consensus        80 ~~D~ViHlAa~~~~--~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~--------~vkr~I~~SS~~vyg~-~~~~~~~~~~  148 (668)
T PLN02260         80 GIDTIMHFAAQTHV--DNSFGNSFEFTKNNIYGTHVLLEACKVTG--------QIRRFIHVSTDEVYGE-TDEDADVGNH  148 (668)
T ss_pred             CCCEEEECCCccCc--hhhhhCHHHHHHHHHHHHHHHHHHHHhcC--------CCcEEEEEcchHHhCC-CccccccCcc
Confidence            79999999996432  12233456778999999998888764331        1358999999754321 1111000111


Q ss_pred             CCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcc
Q 025509          159 DPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNII  209 (251)
Q Consensus       159 ~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~  209 (251)
                      +..+..+...|+.+|.+.+.+++.+..++   +  +.+..+.|+.|..|..
T Consensus       149 E~~~~~p~~~Y~~sK~~aE~~v~~~~~~~---~--l~~vilR~~~VyGp~~  194 (668)
T PLN02260        149 EASQLLPTNPYSATKAGAEMLVMAYGRSY---G--LPVITTRGNNVYGPNQ  194 (668)
T ss_pred             ccCCCCCCCCcHHHHHHHHHHHHHHHHHc---C--CCEEEECcccccCcCC
Confidence            22233345689999999999888776654   4  6777799999988754

>PRK09987 dTDP-4-dehydrorhamnose reductase; Provisional

Probab=99.62  E-value=1.5e-14  Score=123.76  Aligned_cols=158  Identities=15%  Similarity=0.122  Sum_probs=111.4

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      |+||||||+|.||++++++|.++| +|+.++|...                   .+..|++|.+.+.++++..     ++
T Consensus         1 m~iLVtG~~GfiGs~l~~~L~~~g-~V~~~~~~~~-------------------~~~~Dl~d~~~~~~~~~~~-----~~   55 (299)
T PRK09987          1 MNILLFGKTGQVGWELQRALAPLG-NLIALDVHST-------------------DYCGDFSNPEGVAETVRKI-----RP   55 (299)
T ss_pred             CeEEEECCCCHHHHHHHHHhhccC-CEEEeccccc-------------------cccCCCCCHHHHHHHHHhc-----CC
Confidence            689999999999999999999999 7888777421                   2347999999998887753     68


Q ss_pred             eEEEEcCCCCCCCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccccCCCC
Q 025509           81 NILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDP  160 (251)
Q Consensus        81 d~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~  160 (251)
                      |+|||+|+....  +...++.+..+++|+.++..+++++...          +.++|++||.... +.....++.+.   
T Consensus        56 D~Vih~Aa~~~~--~~~~~~~~~~~~~N~~~~~~l~~aa~~~----------g~~~v~~Ss~~Vy-~~~~~~p~~E~---  119 (299)
T PRK09987         56 DVIVNAAAHTAV--DKAESEPEFAQLLNATSVEAIAKAANEV----------GAWVVHYSTDYVF-PGTGDIPWQET---  119 (299)
T ss_pred             CEEEECCccCCc--chhhcCHHHHHHHHHHHHHHHHHHHHHc----------CCeEEEEccceEE-CCCCCCCcCCC---
Confidence            999999996543  1233445667889999999888876543          2489999986643 22222344332   


Q ss_pred             CCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCc
Q 025509          161 SGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNI  208 (251)
Q Consensus       161 ~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~  208 (251)
                      .+..+...|+.+|.+.+.+++..    .+.   .  ..+.|+++..|.
T Consensus       120 ~~~~P~~~Yg~sK~~~E~~~~~~----~~~---~--~ilR~~~vyGp~  158 (299)
T PRK09987        120 DATAPLNVYGETKLAGEKALQEH----CAK---H--LIFRTSWVYAGK  158 (299)
T ss_pred             CCCCCCCHHHHHHHHHHHHHHHh----CCC---E--EEEecceecCCC
Confidence            23334457999999998776543    222   2  346777777653

>TIGR01214 rmlD dTDP-4-dehydrorhamnose reductase

Probab=99.61  E-value=2.5e-14  Score=121.35  Aligned_cols=154  Identities=22%  Similarity=0.235  Sum_probs=112.5

Q ss_pred             EEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCee
Q 025509            2 DIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQLN   81 (251)
Q Consensus         2 ~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~id   81 (251)
                      +||||||+|+||.+++++|.++|++|++++|+                       .+|+.+.+++.++++..     .+|
T Consensus         1 kilv~G~tG~iG~~l~~~l~~~g~~v~~~~r~-----------------------~~d~~~~~~~~~~~~~~-----~~d   52 (287)
T TIGR01214         1 RILITGANGQLGRELVQQLSPEGRVVVALTSS-----------------------QLDLTDPEALERLLRAI-----RPD   52 (287)
T ss_pred             CEEEEcCCCHHHHHHHHHHHhcCCEEEEeCCc-----------------------ccCCCCHHHHHHHHHhC-----CCC
Confidence            48999999999999999999999999998884                       36999999998887653     689


Q ss_pred             EEEEcCCCCCCCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccccCCCCC
Q 025509           82 ILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPS  161 (251)
Q Consensus        82 ~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~  161 (251)
                      +|||+|+.....  ......+..+++|+.++..+++++...          +.++|++||...+.. ....+++   ++.
T Consensus        53 ~vi~~a~~~~~~--~~~~~~~~~~~~n~~~~~~l~~~~~~~----------~~~~v~~Ss~~vy~~-~~~~~~~---E~~  116 (287)
T TIGR01214        53 AVVNTAAYTDVD--GAESDPEKAFAVNALAPQNLARAAARH----------GARLVHISTDYVFDG-EGKRPYR---EDD  116 (287)
T ss_pred             EEEECCcccccc--ccccCHHHHHHHHHHHHHHHHHHHHHc----------CCeEEEEeeeeeecC-CCCCCCC---CCC
Confidence            999999964321  122345678899999999988886432          248999999654321 1112222   222


Q ss_pred             CCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCc
Q 025509          162 GYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNI  208 (251)
Q Consensus       162 ~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~  208 (251)
                      +..+...|+.+|.+.+.+++.+       +  ..+..+.|+.+..+.
T Consensus       117 ~~~~~~~Y~~~K~~~E~~~~~~-------~--~~~~ilR~~~v~G~~  154 (287)
T TIGR01214       117 ATNPLNVYGQSKLAGEQAIRAA-------G--PNALIVRTSWLYGGG  154 (287)
T ss_pred             CCCCcchhhHHHHHHHHHHHHh-------C--CCeEEEEeeecccCC
Confidence            3334568999999988777654       2  345669999998776

This enzyme catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS core antigen, O-antigen, etc.

>KOG1371 consensus UDP-glucose 4-epimerase/UDP-sulfoquinovose synthase [Cell wall/membrane/envelope biogenesis]

Probab=99.61  E-value=1.3e-14  Score=121.20  Aligned_cols=168  Identities=16%  Similarity=0.147  Sum_probs=123.3

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhC-CCCceEEEEecCCCHHHHHHHHHHHHhcCCC
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEI-PSAKVDAMELDLSSLASVRNFASEYNIQHHQ   79 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~-~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~   79 (251)
                      ++||||||+|.||++++.+|.++|+.|++++--...........++.. .+..+.++..|++|.+.++++|++.     .
T Consensus         3 ~~VLVtGgaGyiGsht~l~L~~~gy~v~~vDNl~n~~~~sl~r~~~l~~~~~~v~f~~~Dl~D~~~L~kvF~~~-----~   77 (343)
T KOG1371|consen    3 KHVLVTGGAGYIGSHTVLALLKRGYGVVIVDNLNNSYLESLKRVRQLLGEGKSVFFVEGDLNDAEALEKLFSEV-----K   77 (343)
T ss_pred             cEEEEecCCcceehHHHHHHHhCCCcEEEEecccccchhHHHHHHHhcCCCCceEEEEeccCCHHHHHHHHhhc-----C
Confidence            579999999999999999999999999999853333333333333322 2478999999999999999999975     6


Q ss_pred             eeEEEEcCCCCCCCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccccCCC
Q 025509           80 LNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKIND  159 (251)
Q Consensus        80 id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~  159 (251)
                      +|.|+|-|+...-.  .+-++.......|+.|++.++..+..+-         ...+|+.||+. .++.+..+++   ++
T Consensus        78 fd~V~Hfa~~~~vg--eS~~~p~~Y~~nNi~gtlnlLe~~~~~~---------~~~~V~sssat-vYG~p~~ip~---te  142 (343)
T KOG1371|consen   78 FDAVMHFAALAAVG--ESMENPLSYYHNNIAGTLNLLEVMKAHN---------VKALVFSSSAT-VYGLPTKVPI---TE  142 (343)
T ss_pred             CceEEeehhhhccc--hhhhCchhheehhhhhHHHHHHHHHHcC---------CceEEEeccee-eecCcceeec---cC
Confidence            99999999964321  1334557788999999999888776664         24677777654 4444444444   44


Q ss_pred             CCCCC-cccccchhHHHHHHHHHHHHHHhc
Q 025509          160 PSGYN-GFRAYSQSKLANILHANELARRLK  188 (251)
Q Consensus       160 ~~~~~-~~~~Y~~sK~a~~~~~~~la~e~~  188 (251)
                      +.+.. +..+|+.+|.+++........-+.
T Consensus       143 ~~~t~~p~~pyg~tK~~iE~i~~d~~~~~~  172 (343)
T KOG1371|consen  143 EDPTDQPTNPYGKTKKAIEEIIHDYNKAYG  172 (343)
T ss_pred             cCCCCCCCCcchhhhHHHHHHHHhhhcccc
Confidence            44444 567999999999988887776655

>PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase

Probab=99.60  E-value=2.9e-14  Score=126.32  Aligned_cols=161  Identities=17%  Similarity=0.160  Sum_probs=112.9

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHH--HHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCC
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKD--VKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHH   78 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~--~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g   78 (251)
                      ++||||||+|+||++++++|+++|++|++++|+..+...  ..+++.+.  ...+.++.+|++|.+++.++++.+.   .
T Consensus        61 ~kVLVtGatG~IG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~--~~~v~~v~~Dl~d~~~l~~~~~~~~---~  135 (390)
T PLN02657         61 VTVLVVGATGYIGKFVVRELVRRGYNVVAVAREKSGIRGKNGKEDTKKE--LPGAEVVFGDVTDADSLRKVLFSEG---D  135 (390)
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCEEEEEEechhhccccchhhHHhhh--cCCceEEEeeCCCHHHHHHHHHHhC---C
Confidence            479999999999999999999999999999998755321  11112122  2368899999999999999887541   2


Q ss_pred             CeeEEEEcCCCCCCCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccccCC
Q 025509           79 QLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKIN  158 (251)
Q Consensus        79 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~  158 (251)
                      ++|+||||++.....       ....+++|+.++..+++++.    +.     +.+++|++||.....            
T Consensus       136 ~~D~Vi~~aa~~~~~-------~~~~~~vn~~~~~~ll~aa~----~~-----gv~r~V~iSS~~v~~------------  187 (390)
T PLN02657        136 PVDVVVSCLASRTGG-------VKDSWKIDYQATKNSLDAGR----EV-----GAKHFVLLSAICVQK------------  187 (390)
T ss_pred             CCcEEEECCccCCCC-------CccchhhHHHHHHHHHHHHH----Hc-----CCCEEEEEeeccccC------------
Confidence            699999999842211       12335678888777777653    22     346899999965321            


Q ss_pred             CCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCC
Q 025509          159 DPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATN  207 (251)
Q Consensus       159 ~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~  207 (251)
                            ....|..+|...+...+.     ...|  +....|.|+.+..+
T Consensus       188 ------p~~~~~~sK~~~E~~l~~-----~~~g--l~~tIlRp~~~~~~  223 (390)
T PLN02657        188 ------PLLEFQRAKLKFEAELQA-----LDSD--FTYSIVRPTAFFKS  223 (390)
T ss_pred             ------cchHHHHHHHHHHHHHHh-----ccCC--CCEEEEccHHHhcc
Confidence                  233577888887765443     2345  77778999877643

>TIGR02197 heptose_epim ADP-L-glycero-D-manno-heptose-6-epimerase

Probab=99.59  E-value=6.8e-14  Score=120.11  Aligned_cols=173  Identities=11%  Similarity=0.025  Sum_probs=115.1

Q ss_pred             EEEECCCChhHHHHHHHHHHcCC-EEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCee
Q 025509            3 IVITGATSGIGTETARVLALRGV-HVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQLN   81 (251)
Q Consensus         3 vlItG~s~gIG~a~a~~l~~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~id   81 (251)
                      ||||||+|.||.++++.|.++|+ .|++++|.... ... ..+       ....+..|+++.+.++.+.+.   .+.++|
T Consensus         1 ilItGatG~iG~~l~~~L~~~g~~~v~~~~~~~~~-~~~-~~~-------~~~~~~~d~~~~~~~~~~~~~---~~~~~D   68 (314)
T TIGR02197         1 IIVTGGAGFIGSNLVKALNERGITDILVVDNLRDG-HKF-LNL-------ADLVIADYIDKEDFLDRLEKG---AFGKIE   68 (314)
T ss_pred             CEEeCCcchhhHHHHHHHHHcCCceEEEEecCCCc-hhh-hhh-------hheeeeccCcchhHHHHHHhh---ccCCCC
Confidence            69999999999999999999998 78888765432 111 111       113456788887666655442   345899


Q ss_pred             EEEEcCCCCCCCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccccCCCCC
Q 025509           82 ILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPS  161 (251)
Q Consensus        82 ~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~  161 (251)
                      +|||+|+...    .+.++.+..+++|+.++..+++++...          +.++|++||..... ... .++   ..+.
T Consensus        69 ~vvh~A~~~~----~~~~~~~~~~~~n~~~~~~ll~~~~~~----------~~~~v~~SS~~vy~-~~~-~~~---~e~~  129 (314)
T TIGR02197        69 AIFHQGACSD----TTETDGEYMMENNYQYSKRLLDWCAEK----------GIPFIYASSAATYG-DGE-AGF---REGR  129 (314)
T ss_pred             EEEECccccC----ccccchHHHHHHHHHHHHHHHHHHHHh----------CCcEEEEccHHhcC-CCC-CCc---cccc
Confidence            9999999632    233456788999999999988886542          24799999965432 111 111   1111


Q ss_pred             C-CCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcc
Q 025509          162 G-YNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNII  209 (251)
Q Consensus       162 ~-~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~  209 (251)
                      + ..+...|+.+|.+.+.+++....... .+  +.+..+.|+.+..+..
T Consensus       130 ~~~~p~~~Y~~sK~~~e~~~~~~~~~~~-~~--~~~~~lR~~~vyG~~~  175 (314)
T TIGR02197       130 ELERPLNVYGYSKFLFDQYVRRRVLPEA-LS--AQVVGLRYFNVYGPRE  175 (314)
T ss_pred             CcCCCCCHHHHHHHHHHHHHHHHhHhhc-cC--CceEEEEEeeccCCCC
Confidence            1 12456899999999888775332221 12  5667789988887753

This family consists of examples of ADP-L-glycero-D-mannoheptose-6-epimerase, an enzyme involved in biosynthesis of the inner core of lipopolysaccharide (LPS) for Gram-negative bacteria. This enzyme is homologous to UDP-glucose 4-epimerase (TIGR01179) and belongs to the NAD dependent epimerase/dehydratase family (pfam01370).

>PLN02206 UDP-glucuronate decarboxylase

Probab=99.57  E-value=1.8e-13  Score=122.99  Aligned_cols=176  Identities=13%  Similarity=0.069  Sum_probs=117.6

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      |+||||||+|.||++++++|.++|++|++++|......+   .+........+.++..|+.+..     +       ..+
T Consensus       120 ~kILVTGatGfIGs~Lv~~Ll~~G~~V~~ld~~~~~~~~---~~~~~~~~~~~~~i~~D~~~~~-----l-------~~~  184 (442)
T PLN02206        120 LRVVVTGGAGFVGSHLVDRLMARGDSVIVVDNFFTGRKE---NVMHHFSNPNFELIRHDVVEPI-----L-------LEV  184 (442)
T ss_pred             CEEEEECcccHHHHHHHHHHHHCcCEEEEEeCCCccchh---hhhhhccCCceEEEECCccChh-----h-------cCC
Confidence            579999999999999999999999999988875322111   1111122345788888987642     1       158


Q ss_pred             eEEEEcCCCCCCCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccccCC--
Q 025509           81 NILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKIN--  158 (251)
Q Consensus        81 d~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~--  158 (251)
                      |+|||+|+...+..  ..++..+.+++|+.++..+++++...          +.++|++||...+. .....+..+..  
T Consensus       185 D~ViHlAa~~~~~~--~~~~p~~~~~~Nv~gt~nLleaa~~~----------g~r~V~~SS~~VYg-~~~~~p~~E~~~~  251 (442)
T PLN02206        185 DQIYHLACPASPVH--YKFNPVKTIKTNVVGTLNMLGLAKRV----------GARFLLTSTSEVYG-DPLQHPQVETYWG  251 (442)
T ss_pred             CEEEEeeeecchhh--hhcCHHHHHHHHHHHHHHHHHHHHHh----------CCEEEEECChHHhC-CCCCCCCCccccc
Confidence            99999998654311  12345678999999999998887543          23899999975442 22122221111  


Q ss_pred             CCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcc
Q 025509          159 DPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNII  209 (251)
Q Consensus       159 ~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~  209 (251)
                      ...+......|+.+|.+.+.++..+...+   |  +.+..+.|+.+..|..
T Consensus       252 ~~~P~~~~s~Y~~SK~~aE~~~~~y~~~~---g--~~~~ilR~~~vyGp~~  297 (442)
T PLN02206        252 NVNPIGVRSCYDEGKRTAETLTMDYHRGA---N--VEVRIARIFNTYGPRM  297 (442)
T ss_pred             cCCCCCccchHHHHHHHHHHHHHHHHHHh---C--CCeEEEEeccccCCCC
Confidence            11233345689999999988777665543   4  6666788988887753

>PLN02166 dTDP-glucose 4,6-dehydratase

Probab=99.56  E-value=2.3e-13  Score=122.11  Aligned_cols=176  Identities=14%  Similarity=0.086  Sum_probs=117.8

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      |+||||||+|.||++++++|.++|++|++++|......+....+   .....+.++..|+.+..     +       .++
T Consensus       121 mkILVTGatGFIGs~Lv~~Ll~~G~~V~~ldr~~~~~~~~~~~~---~~~~~~~~~~~Di~~~~-----~-------~~~  185 (436)
T PLN02166        121 LRIVVTGGAGFVGSHLVDKLIGRGDEVIVIDNFFTGRKENLVHL---FGNPRFELIRHDVVEPI-----L-------LEV  185 (436)
T ss_pred             CEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCCCccHhHhhhh---ccCCceEEEECcccccc-----c-------cCC
Confidence            57999999999999999999999999999988532211111111   11235778888886531     1       258


Q ss_pred             eEEEEcCCCCCCCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccccCC--
Q 025509           81 NILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKIN--  158 (251)
Q Consensus        81 d~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~--  158 (251)
                      |+|||+|+...+..  ...+....+++|+.++..++.++...          +.++|++||...+ +...+.+.++..  
T Consensus       186 D~ViHlAa~~~~~~--~~~~p~~~~~~Nv~gT~nLleaa~~~----------g~r~V~~SS~~VY-g~~~~~p~~E~~~~  252 (436)
T PLN02166        186 DQIYHLACPASPVH--YKYNPVKTIKTNVMGTLNMLGLAKRV----------GARFLLTSTSEVY-GDPLEHPQKETYWG  252 (436)
T ss_pred             CEEEECceeccchh--hccCHHHHHHHHHHHHHHHHHHHHHh----------CCEEEEECcHHHh-CCCCCCCCCccccc
Confidence            99999998643311  12245678999999999998887643          2389999987543 222222222211  


Q ss_pred             CCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcc
Q 025509          159 DPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNII  209 (251)
Q Consensus       159 ~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~  209 (251)
                      ...+......|+.+|.+.+.+++......   +  +.+..+.|+.+..|..
T Consensus       253 ~~~p~~p~s~Yg~SK~~aE~~~~~y~~~~---~--l~~~ilR~~~vYGp~~  298 (436)
T PLN02166        253 NVNPIGERSCYDEGKRTAETLAMDYHRGA---G--VEVRIARIFNTYGPRM  298 (436)
T ss_pred             cCCCCCCCCchHHHHHHHHHHHHHHHHHh---C--CCeEEEEEccccCCCC
Confidence            01233345689999999988887766543   4  5666689998888753

>PLN02725 GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductase

Probab=99.54  E-value=1.3e-13  Score=117.87  Aligned_cols=163  Identities=16%  Similarity=0.067  Sum_probs=112.6

Q ss_pred             EEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCeeEE
Q 025509            4 VITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQLNIL   83 (251)
Q Consensus         4 lItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~id~l   83 (251)
                      |||||+|.||+++++.|.+.|++|+++.+.                      ..+|+++.+++.++++..     ++|+|
T Consensus         1 lItGa~GfiG~~l~~~L~~~g~~v~~~~~~----------------------~~~Dl~~~~~l~~~~~~~-----~~d~V   53 (306)
T PLN02725          1 FVAGHRGLVGSAIVRKLEALGFTNLVLRTH----------------------KELDLTRQADVEAFFAKE-----KPTYV   53 (306)
T ss_pred             CcccCCCcccHHHHHHHHhCCCcEEEeecc----------------------ccCCCCCHHHHHHHHhcc-----CCCEE
Confidence            699999999999999999999987765432                      137999999988877753     68999


Q ss_pred             EEcCCCCCCCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccccCCCC-CC
Q 025509           84 INNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDP-SG  162 (251)
Q Consensus        84 v~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~-~~  162 (251)
                      ||+|+...... ...++....+++|+.++..+++++...         +..++|++||..... .....+.++-+.. .+
T Consensus        54 ih~A~~~~~~~-~~~~~~~~~~~~n~~~~~~ll~~~~~~---------~~~~~i~~SS~~vyg-~~~~~~~~E~~~~~~~  122 (306)
T PLN02725         54 ILAAAKVGGIH-ANMTYPADFIRENLQIQTNVIDAAYRH---------GVKKLLFLGSSCIYP-KFAPQPIPETALLTGP  122 (306)
T ss_pred             EEeeeeecccc-hhhhCcHHHHHHHhHHHHHHHHHHHHc---------CCCeEEEeCceeecC-CCCCCCCCHHHhccCC
Confidence            99999643211 112334567899999999888887654         235899999975432 1112222211100 01


Q ss_pred             C-CcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcc
Q 025509          163 Y-NGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNII  209 (251)
Q Consensus       163 ~-~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~  209 (251)
                      . |....|+.+|.+.+.+.+.+..+.   +  +++..+.|+.+..+..
T Consensus       123 ~~p~~~~Y~~sK~~~e~~~~~~~~~~---~--~~~~~~R~~~vyG~~~  165 (306)
T PLN02725        123 PEPTNEWYAIAKIAGIKMCQAYRIQY---G--WDAISGMPTNLYGPHD  165 (306)
T ss_pred             CCCCcchHHHHHHHHHHHHHHHHHHh---C--CCEEEEEecceeCCCC
Confidence            1 223359999999988777776554   4  6778899999988753

>CHL00194 ycf39 Ycf39; Provisional

Probab=99.53  E-value=2.2e-13  Score=117.57  Aligned_cols=149  Identities=15%  Similarity=0.087  Sum_probs=105.8

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      |+|+||||+|.||++++++|.++|++|.+.+|+..+....    .    ...+.++.+|++|++++.+.++       ++
T Consensus         1 MkIlVtGatG~iG~~lv~~Ll~~g~~V~~l~R~~~~~~~l----~----~~~v~~v~~Dl~d~~~l~~al~-------g~   65 (317)
T CHL00194          1 MSLLVIGATGTLGRQIVRQALDEGYQVRCLVRNLRKASFL----K----EWGAELVYGDLSLPETLPPSFK-------GV   65 (317)
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcChHHhhhH----h----hcCCEEEECCCCCHHHHHHHHC-------CC
Confidence            6899999999999999999999999999999986543221    1    2358899999999998877665       58


Q ss_pred             eEEEEcCCCCCCCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccccCCCC
Q 025509           81 NILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDP  160 (251)
Q Consensus        81 d~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~  160 (251)
                      |+|||+++...       .+.....++|+.++.++++++...         +-.++|++||.....              
T Consensus        66 d~Vi~~~~~~~-------~~~~~~~~~~~~~~~~l~~aa~~~---------gvkr~I~~Ss~~~~~--------------  115 (317)
T CHL00194         66 TAIIDASTSRP-------SDLYNAKQIDWDGKLALIEAAKAA---------KIKRFIFFSILNAEQ--------------  115 (317)
T ss_pred             CEEEECCCCCC-------CCccchhhhhHHHHHHHHHHHHHc---------CCCEEEEeccccccc--------------
Confidence            99999876321       123446778888888777776543         234899999853221              


Q ss_pred             CCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccC
Q 025509          161 SGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIAT  206 (251)
Q Consensus       161 ~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t  206 (251)
                         .+..+|..+|...+.+.+       ..|  +....+.|+.+..
T Consensus       116 ---~~~~~~~~~K~~~e~~l~-------~~~--l~~tilRp~~~~~  149 (317)
T CHL00194        116 ---YPYIPLMKLKSDIEQKLK-------KSG--IPYTIFRLAGFFQ  149 (317)
T ss_pred             ---cCCChHHHHHHHHHHHHH-------HcC--CCeEEEeecHHhh
Confidence               122457788887665442       235  5666688886543

>PF04321 RmlD_sub_bind: RmlD substrate binding domain; InterPro: IPR005913 dTDP-4-dehydrorhamnose reductase (1

Probab=99.52  E-value=2.2e-13  Score=115.89  Aligned_cols=154  Identities=23%  Similarity=0.263  Sum_probs=104.9

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      |+|||||++|.||.++++.|.+.|++|+.+.|+                       .+|+.|.+++.+++++.     ++
T Consensus         1 MriLI~GasG~lG~~l~~~l~~~~~~v~~~~r~-----------------------~~dl~d~~~~~~~~~~~-----~p   52 (286)
T PF04321_consen    1 MRILITGASGFLGSALARALKERGYEVIATSRS-----------------------DLDLTDPEAVAKLLEAF-----KP   52 (286)
T ss_dssp             EEEEEETTTSHHHHHHHHHHTTTSEEEEEESTT-----------------------CS-TTSHHHHHHHHHHH-------
T ss_pred             CEEEEECCCCHHHHHHHHHHhhCCCEEEEeCch-----------------------hcCCCCHHHHHHHHHHh-----CC
Confidence            689999999999999999999999999988775                       47999999999999886     79


Q ss_pred             eEEEEcCCCCCCCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccccCCCC
Q 025509           81 NILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDP  160 (251)
Q Consensus        81 d~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~  160 (251)
                      |+|||+|++..+  +.-+++.+..+++|+.++..+.+++...          +.++|++||.....+. .+.+|.+.+. 
T Consensus        53 d~Vin~aa~~~~--~~ce~~p~~a~~iN~~~~~~la~~~~~~----------~~~li~~STd~VFdG~-~~~~y~E~d~-  118 (286)
T PF04321_consen   53 DVVINCAAYTNV--DACEKNPEEAYAINVDATKNLAEACKER----------GARLIHISTDYVFDGD-KGGPYTEDDP-  118 (286)
T ss_dssp             SEEEE------H--HHHHHSHHHHHHHHTHHHHHHHHHHHHC----------T-EEEEEEEGGGS-SS-TSSSB-TTS--
T ss_pred             CeEeccceeecH--HhhhhChhhhHHHhhHHHHHHHHHHHHc----------CCcEEEeeccEEEcCC-cccccccCCC-
Confidence            999999997432  2234457788999999998888876543          5699999997655432 2233444333 


Q ss_pred             CCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCC
Q 025509          161 SGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATN  207 (251)
Q Consensus       161 ~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~  207 (251)
                        ..+...|+.+|...+...+.    ..+ +  ..|  +.++++..+
T Consensus       119 --~~P~~~YG~~K~~~E~~v~~----~~~-~--~~I--lR~~~~~g~  154 (286)
T PF04321_consen  119 --PNPLNVYGRSKLEGEQAVRA----ACP-N--ALI--LRTSWVYGP  154 (286)
T ss_dssp             -----SSHHHHHHHHHHHHHHH----H-S-S--EEE--EEE-SEESS
T ss_pred             --CCCCCHHHHHHHHHHHHHHH----hcC-C--EEE--Eecceeccc
Confidence              33456899999998765554    222 2  344  788888777

1.1.133 from EC) catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS molecules such as core antigen and O-antigen. dTDP-6-deoxy-L-mannose + NADP+ = dTDP-4-dehydro-6-deoxy-L-mannose + NADPH ; GO: 0008831 dTDP-4-dehydrorhamnose reductase activity, 0045226 extracellular polysaccharide biosynthetic process; PDB: 2YDX_D 2YDY_A 3SC6_C 1VL0_B 2GGS_A 1KBZ_A 1KC3_A 1KC1_A 1N2S_A.

>PRK07201 short chain dehydrogenase; Provisional

Probab=99.52  E-value=8.2e-13  Score=124.58  Aligned_cols=178  Identities=20%  Similarity=0.147  Sum_probs=116.1

Q ss_pred             CEEEEECCCChhHHHHHHHHH--HcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHH--HHHHHHHHhc
Q 025509            1 MDIVITGATSGIGTETARVLA--LRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASV--RNFASEYNIQ   76 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~--~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i--~~~~~~~~~~   76 (251)
                      |+||||||+|.||++++++|+  ..|++|++++|+... .... .+.......++.++.+|+++++..  ...++++   
T Consensus         1 m~ILVTGatGfIG~~lv~~Ll~~~~g~~V~~l~R~~~~-~~~~-~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~l---   75 (657)
T PRK07201          1 MRYFVTGGTGFIGRRLVSRLLDRRREATVHVLVRRQSL-SRLE-ALAAYWGADRVVPLVGDLTEPGLGLSEADIAEL---   75 (657)
T ss_pred             CeEEEeCCccHHHHHHHHHHHhcCCCCEEEEEECcchH-HHHH-HHHHhcCCCcEEEEecccCCccCCcCHHHHHHh---
Confidence            689999999999999999999  578999999996432 2222 222222225688999999985310  1112222   


Q ss_pred             CCCeeEEEEcCCCCCCCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCccccc
Q 025509           77 HHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDK  156 (251)
Q Consensus        77 ~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~  156 (251)
                       .++|+|||+|+.....     .......++|+.++..+++++...         +..++|++||.........  .+.+
T Consensus        76 -~~~D~Vih~Aa~~~~~-----~~~~~~~~~nv~gt~~ll~~a~~~---------~~~~~v~~SS~~v~g~~~~--~~~e  138 (657)
T PRK07201         76 -GDIDHVVHLAAIYDLT-----ADEEAQRAANVDGTRNVVELAERL---------QAATFHHVSSIAVAGDYEG--VFRE  138 (657)
T ss_pred             -cCCCEEEECceeecCC-----CCHHHHHHHHhHHHHHHHHHHHhc---------CCCeEEEEeccccccCccC--cccc
Confidence             3799999999964321     124567789999988888775432         2458999999765421111  1111


Q ss_pred             CCCCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCc
Q 025509          157 INDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNI  208 (251)
Q Consensus       157 ~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~  208 (251)
                      ...+.+......|+.+|.+.+.+.+.      ..|  +.+..+.|+.+..+.
T Consensus       139 ~~~~~~~~~~~~Y~~sK~~~E~~~~~------~~g--~~~~ilRp~~v~G~~  182 (657)
T PRK07201        139 DDFDEGQGLPTPYHRTKFEAEKLVRE------ECG--LPWRVYRPAVVVGDS  182 (657)
T ss_pred             ccchhhcCCCCchHHHHHHHHHHHHH------cCC--CcEEEEcCCeeeecC
Confidence            11111222345799999999877652      235  777789999998753

>PF07993 NAD_binding_4: Male sterility protein; InterPro: IPR013120 This family represents the C-terminal NAD-binding region of the male sterility protein from Arabidopsis and Drosophila

Probab=99.48  E-value=2e-13  Score=113.85  Aligned_cols=176  Identities=20%  Similarity=0.188  Sum_probs=98.7

Q ss_pred             EECCCChhHHHHHHHHHHcCC--EEEEEecCchh---HHHHHHHHHhh-----C---CCCceEEEEecCCCH------HH
Q 025509            5 ITGATSGIGTETARVLALRGV--HVVMGVRDIAA---GKDVKETIVKE-----I---PSAKVDAMELDLSSL------AS   65 (251)
Q Consensus         5 ItG~s~gIG~a~a~~l~~~G~--~Vi~~~r~~~~---~~~~~~~~~~~-----~---~~~~v~~~~~D~~~~------~~   65 (251)
                      ||||+|.||.++..+|++.+.  +|++..|..+.   .+++.+.+.+.     .   ...++.++..|++++      ++
T Consensus         1 lTGaTGflG~~ll~~Ll~~~~~~~I~cLvR~~~~~~~~~rl~~~l~~~~~~~~~~~~~~~ri~~v~GDl~~~~lGL~~~~   80 (249)
T PF07993_consen    1 LTGATGFLGSHLLEELLRQPPDVKIYCLVRASSSQSALERLKDALKEYGLWDDLDKEALSRIEVVEGDLSQPNLGLSDED   80 (249)
T ss_dssp             EE-TTSHHHHHHHHHHHHHS-TTEEEEEE-SSSHHHHHHHHHGGG-SS-HHHHH-HHHTTTEEEEE--TTSGGGG--HHH
T ss_pred             CcCCCcHHHHHHHHHHHcCCCCcEEEEEEeCcccccchhhhhhhcccccchhhhhhhhhccEEEEeccccccccCCChHH
Confidence            799999999999999999876  89999997633   22222221110     0   146899999999974      34


Q ss_pred             HHHHHHHHHhcCCCeeEEEEcCCCCCCCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCcccc
Q 025509           66 VRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHR  145 (251)
Q Consensus        66 i~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~  145 (251)
                      ...+.+       .+|+|||||+......     ..++..++|+.|+..+++.+...         ...+++++|| +..
T Consensus        81 ~~~L~~-------~v~~IiH~Aa~v~~~~-----~~~~~~~~NV~gt~~ll~la~~~---------~~~~~~~iST-a~v  138 (249)
T PF07993_consen   81 YQELAE-------EVDVIIHCAASVNFNA-----PYSELRAVNVDGTRNLLRLAAQG---------KRKRFHYIST-AYV  138 (249)
T ss_dssp             HHHHHH-------H--EEEE--SS-SBS------S--EEHHHHHHHHHHHHHHHTSS---------S---EEEEEE-GGG
T ss_pred             hhcccc-------ccceeeecchhhhhcc-----cchhhhhhHHHHHHHHHHHHHhc---------cCcceEEecc-ccc
Confidence            444433       5899999999643211     24446889999998888876521         2238999999 322


Q ss_pred             ccccCC-c---c--cccCCCCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCC
Q 025509          146 LAYHEG-I---R--FDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATN  207 (251)
Q Consensus       146 ~~~~~~-~---~--~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~  207 (251)
                      .....+ .   .  ..+............|..||...+.+.+..+.+.   |  +.+..+.||.|-..
T Consensus       139 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~gY~~SK~~aE~~l~~a~~~~---g--~p~~I~Rp~~i~g~  201 (249)
T PF07993_consen  139 AGSRPGTIEEKVYPEEEDDLDPPQGFPNGYEQSKWVAERLLREAAQRH---G--LPVTIYRPGIIVGD  201 (249)
T ss_dssp             TTS-TTT--SSS-HHH--EEE--TTSEE-HHHHHHHHHHHHHHHHHHH--------EEEEEE-EEE-S
T ss_pred             cCCCCCcccccccccccccchhhccCCccHHHHHHHHHHHHHHHHhcC---C--ceEEEEecCccccc
Confidence            222111 1   0  1111111122334599999999999888877653   4  66777999999763

A sequence-related jojoba acyl CoA reductase is also included.; PDB: 4DQV_A.

>KOG1430 consensus C-3 sterol dehydrogenase/3-beta-hydroxysteroid dehydrogenase and related dehydrogenases [Lipid transport and metabolism; Amino acid transport and metabolism]

Probab=99.46  E-value=1.1e-12  Score=113.18  Aligned_cols=184  Identities=15%  Similarity=0.097  Sum_probs=128.6

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcC--CEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCC
Q 025509            1 MDIVITGATSGIGTETARVLALRG--VHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHH   78 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G--~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g   78 (251)
                      .++|||||+|.+|.+++++|.+.+  .+|.+++..+....-..+.+..  .+..+.++++|+.+..++.+.+.       
T Consensus         5 ~~vlVtGG~GflG~hlv~~L~~~~~~~~irv~D~~~~~~~~~~e~~~~--~~~~v~~~~~D~~~~~~i~~a~~-------   75 (361)
T KOG1430|consen    5 LSVLVTGGSGFLGQHLVQALLENELKLEIRVVDKTPTQSNLPAELTGF--RSGRVTVILGDLLDANSISNAFQ-------   75 (361)
T ss_pred             CEEEEECCccHHHHHHHHHHHhcccccEEEEeccCccccccchhhhcc--cCCceeEEecchhhhhhhhhhcc-------
Confidence            379999999999999999999988  6899999876421111111111  15679999999999888887666       


Q ss_pred             CeeEEEEcCCCCCCCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccccCC
Q 025509           79 QLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKIN  158 (251)
Q Consensus        79 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~  158 (251)
                      ++ .+||+|....+  ..-..+-+..+++|+.|+.+++.++...-.         .++|++||......... ..+.+-+
T Consensus        76 ~~-~Vvh~aa~~~~--~~~~~~~~~~~~vNV~gT~nvi~~c~~~~v---------~~lIYtSs~~Vvf~g~~-~~n~~E~  142 (361)
T KOG1430|consen   76 GA-VVVHCAASPVP--DFVENDRDLAMRVNVNGTLNVIEACKELGV---------KRLIYTSSAYVVFGGEP-IINGDES  142 (361)
T ss_pred             Cc-eEEEeccccCc--cccccchhhheeecchhHHHHHHHHHHhCC---------CEEEEecCceEEeCCee-cccCCCC
Confidence            55 77777765333  122235678899999999999888877744         48999999876654322 2222222


Q ss_pred             CCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccC
Q 025509          159 DPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  211 (251)
Q Consensus       159 ~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  211 (251)
                      .+.|......|+.||+-.+.+.+....   ..+  +...++.|..|..|.-..
T Consensus       143 ~p~p~~~~d~Y~~sKa~aE~~Vl~an~---~~~--l~T~aLR~~~IYGpgd~~  190 (361)
T KOG1430|consen  143 LPYPLKHIDPYGESKALAEKLVLEANG---SDD--LYTCALRPPGIYGPGDKR  190 (361)
T ss_pred             CCCccccccccchHHHHHHHHHHHhcC---CCC--eeEEEEccccccCCCCcc
Confidence            222333446999999887765554443   233  888999999999887554

>PLN02778 3,5-epimerase/4-reductase

Probab=99.45  E-value=3.8e-12  Score=108.99  Aligned_cols=141  Identities=18%  Similarity=0.163  Sum_probs=92.6

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      |+||||||+|.||++++++|.++|++|+...                          .|+.+.+.+...+++.     ++
T Consensus        10 ~kiLVtG~tGfiG~~l~~~L~~~g~~V~~~~--------------------------~~~~~~~~v~~~l~~~-----~~   58 (298)
T PLN02778         10 LKFLIYGKTGWIGGLLGKLCQEQGIDFHYGS--------------------------GRLENRASLEADIDAV-----KP   58 (298)
T ss_pred             CeEEEECCCCHHHHHHHHHHHhCCCEEEEec--------------------------CccCCHHHHHHHHHhc-----CC
Confidence            5799999999999999999999999986421                          2344555555544432     68


Q ss_pred             eEEEEcCCCCCCC-CcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccC-----Cccc
Q 025509           81 NILINNAGIMGTP-FMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHE-----GIRF  154 (251)
Q Consensus        81 d~lv~~ag~~~~~-~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~-----~~~~  154 (251)
                      |+|||+||..... .+...++....+++|+.++..+++++...          +.+.+++||.........     +..+
T Consensus        59 D~ViH~Aa~~~~~~~~~~~~~p~~~~~~Nv~gt~~ll~aa~~~----------gv~~v~~sS~~vy~~~~~~p~~~~~~~  128 (298)
T PLN02778         59 THVFNAAGVTGRPNVDWCESHKVETIRANVVGTLTLADVCRER----------GLVLTNYATGCIFEYDDAHPLGSGIGF  128 (298)
T ss_pred             CEEEECCcccCCCCchhhhhCHHHHHHHHHHHHHHHHHHHHHh----------CCCEEEEecceEeCCCCCCCcccCCCC
Confidence            9999999975432 12233456788999999999999887654          124556665432211110     1112


Q ss_pred             ccCCCCCCCCcccccchhHHHHHHHHHHHH
Q 025509          155 DKINDPSGYNGFRAYSQSKLANILHANELA  184 (251)
Q Consensus       155 ~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la  184 (251)
                      .+-+  .+.+....|+.+|.+.+.+++..+
T Consensus       129 ~Ee~--~p~~~~s~Yg~sK~~~E~~~~~y~  156 (298)
T PLN02778        129 KEED--TPNFTGSFYSKTKAMVEELLKNYE  156 (298)
T ss_pred             CcCC--CCCCCCCchHHHHHHHHHHHHHhh
Confidence            2111  122234689999999998887754

>PLN02996 fatty acyl-CoA reductase

Probab=99.43  E-value=6e-12  Score=114.63  Aligned_cols=183  Identities=16%  Similarity=0.170  Sum_probs=117.4

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcC---CEEEEEecCchh---HHHHHHHH---------HhhCC-------CCceEEEEe
Q 025509            1 MDIVITGATSGIGTETARVLALRG---VHVVMGVRDIAA---GKDVKETI---------VKEIP-------SAKVDAMEL   58 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G---~~Vi~~~r~~~~---~~~~~~~~---------~~~~~-------~~~v~~~~~   58 (251)
                      |+||||||+|.||+++++.|++.+   .+|++..|..+.   .+.+..++         .+..+       ..++.++..
T Consensus        12 k~VlvTGaTGFlG~~ll~~LL~~~~~v~~I~~LvR~~~~~~~~~rl~~~~~~~~~f~~~~~~~~~~~~~~~~~kv~~i~G   91 (491)
T PLN02996         12 KTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRASDAKSATQRLHDEVIGKDLFKVLREKLGENLNSLISEKVTPVPG   91 (491)
T ss_pred             CeEEEeCCCcHHHHHHHHHHHhhCCCCCEEEEEEeCCCCCCHHHHHHHHHhhchHHHHHHHhcchhhhhhhhcCEEEEec
Confidence            689999999999999999999764   267888886432   11111111         11111       146899999


Q ss_pred             cCCC-------HHHHHHHHHHHHhcCCCeeEEEEcCCCCCCCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCC
Q 025509           59 DLSS-------LASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSG  131 (251)
Q Consensus        59 D~~~-------~~~i~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~  131 (251)
                      |+++       .+.++++++       .+|+|||+|+....     .++.+..+++|+.|+..+++++...-        
T Consensus        92 Dl~~~~LGLs~~~~~~~l~~-------~vD~ViH~AA~v~~-----~~~~~~~~~~Nv~gt~~ll~~a~~~~--------  151 (491)
T PLN02996         92 DISYDDLGVKDSNLREEMWK-------EIDIVVNLAATTNF-----DERYDVALGINTLGALNVLNFAKKCV--------  151 (491)
T ss_pred             ccCCcCCCCChHHHHHHHHh-------CCCEEEECccccCC-----cCCHHHHHHHHHHHHHHHHHHHHhcC--------
Confidence            9984       333444443       58999999996542     23567789999999999988875431        


Q ss_pred             CCceEEEEcCccccccccC---Ccccc-----------cCC-------------------C------------CC--CCC
Q 025509          132 GEGRIINVSSEGHRLAYHE---GIRFD-----------KIN-------------------D------------PS--GYN  164 (251)
Q Consensus       132 ~~g~iv~vsS~~~~~~~~~---~~~~~-----------~~~-------------------~------------~~--~~~  164 (251)
                      ...++|++||........+   ..+|.           +++                   .            +.  ...
T Consensus       152 ~~k~~V~vST~~vyG~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  231 (491)
T PLN02996        152 KVKMLLHVSTAYVCGEKSGLILEKPFHMGETLNGNRKLDINEEKKLVKEKLKELNEQDASEEEITQAMKDLGMERAKLHG  231 (491)
T ss_pred             CCCeEEEEeeeEEecCCCceeeeecCCCcccccccccCChHHHHHHHHHHHHHHHhhcCCHHHHHHHhhhhchhHHHhCC
Confidence            1248999998765432111   11111           000                   0            00  011


Q ss_pred             cccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCccc
Q 025509          165 GFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIR  210 (251)
Q Consensus       165 ~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~  210 (251)
                      ....|+.||++.+.+++..    . .|  +.+..+.|+.|..+...
T Consensus       232 ~pn~Y~~TK~~aE~lv~~~----~-~~--lpv~i~RP~~V~G~~~~  270 (491)
T PLN02996        232 WPNTYVFTKAMGEMLLGNF----K-EN--LPLVIIRPTMITSTYKE  270 (491)
T ss_pred             CCCchHhhHHHHHHHHHHh----c-CC--CCEEEECCCEeccCCcC
Confidence            1236999999999888643    2 25  77888999999887643

>COG1091 RfbD dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane]

Probab=99.41  E-value=8.3e-12  Score=104.23  Aligned_cols=138  Identities=26%  Similarity=0.337  Sum_probs=107.6

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      |.+||||++|-+|.++++.|. .++.|+.++|..                       +|++|.+.+.+++.+.     ++
T Consensus         1 M~iLi~G~~GqLG~~L~~~l~-~~~~v~a~~~~~-----------------------~Ditd~~~v~~~i~~~-----~P   51 (281)
T COG1091           1 MKILITGANGQLGTELRRALP-GEFEVIATDRAE-----------------------LDITDPDAVLEVIRET-----RP   51 (281)
T ss_pred             CcEEEEcCCChHHHHHHHHhC-CCceEEeccCcc-----------------------ccccChHHHHHHHHhh-----CC
Confidence            469999999999999999999 678999888753                       7999999999999987     89


Q ss_pred             eEEEEcCCCCCCCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccccCCCC
Q 025509           81 NILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDP  160 (251)
Q Consensus        81 d~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~  160 (251)
                      |+|||+|+...-  +.-+.+.+..+.+|..++.++++++...          +.++|.+|+....-+.. +.+|.+.+.+
T Consensus        52 DvVIn~AAyt~v--D~aE~~~e~A~~vNa~~~~~lA~aa~~~----------ga~lVhiSTDyVFDG~~-~~~Y~E~D~~  118 (281)
T COG1091          52 DVVINAAAYTAV--DKAESEPELAFAVNATGAENLARAAAEV----------GARLVHISTDYVFDGEK-GGPYKETDTP  118 (281)
T ss_pred             CEEEECcccccc--ccccCCHHHHHHhHHHHHHHHHHHHHHh----------CCeEEEeecceEecCCC-CCCCCCCCCC
Confidence            999999997542  2334456888999999999999987665          56899999977654432 2345444443


Q ss_pred             CCCCcccccchhHHHHHHHHHHH
Q 025509          161 SGYNGFRAYSQSKLANILHANEL  183 (251)
Q Consensus       161 ~~~~~~~~Y~~sK~a~~~~~~~l  183 (251)
                      .   +...|+.||.+-+..++..
T Consensus       119 ~---P~nvYG~sKl~GE~~v~~~  138 (281)
T COG1091         119 N---PLNVYGRSKLAGEEAVRAA  138 (281)
T ss_pred             C---ChhhhhHHHHHHHHHHHHh
Confidence            3   4458999999877655544

>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B

Probab=99.41  E-value=1.5e-11  Score=97.46  Aligned_cols=152  Identities=27%  Similarity=0.288  Sum_probs=104.9

Q ss_pred             EEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCeeE
Q 025509            3 IVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQLNI   82 (251)
Q Consensus         3 vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~id~   82 (251)
                      |+|+||+|.+|++++++|.++|++|++..|++.+.++          ...+.++++|+.|.+++.+.++       ++|+
T Consensus         1 I~V~GatG~vG~~l~~~L~~~~~~V~~~~R~~~~~~~----------~~~~~~~~~d~~d~~~~~~al~-------~~d~   63 (183)
T PF13460_consen    1 ILVFGATGFVGRALAKQLLRRGHEVTALVRSPSKAED----------SPGVEIIQGDLFDPDSVKAALK-------GADA   63 (183)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTSEEEEEESSGGGHHH----------CTTEEEEESCTTCHHHHHHHHT-------TSSE
T ss_pred             eEEECCCChHHHHHHHHHHHCCCEEEEEecCchhccc----------ccccccceeeehhhhhhhhhhh-------hcch
Confidence            7999999999999999999999999999999887665          3579999999999988887666       6899


Q ss_pred             EEEcCCCCCCCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccccCCCCCC
Q 025509           83 LINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSG  162 (251)
Q Consensus        83 lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~  162 (251)
                      +|+++|....       +            ...++.++..+++.     +..+++++||..........  +.+.    .
T Consensus        64 vi~~~~~~~~-------~------------~~~~~~~~~a~~~~-----~~~~~v~~s~~~~~~~~~~~--~~~~----~  113 (183)
T PF13460_consen   64 VIHAAGPPPK-------D------------VDAAKNIIEAAKKA-----GVKRVVYLSSAGVYRDPPGL--FSDE----D  113 (183)
T ss_dssp             EEECCHSTTT-------H------------HHHHHHHHHHHHHT-----TSSEEEEEEETTGTTTCTSE--EEGG----T
T ss_pred             hhhhhhhhcc-------c------------cccccccccccccc-----ccccceeeeccccCCCCCcc--cccc----c
Confidence            9999984221       1            34445555566554     35699999987644311110  0000    1


Q ss_pred             CCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCccc
Q 025509          163 YNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIR  210 (251)
Q Consensus       163 ~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~  210 (251)
                      .+....|...|...+.+.       ...+  +....|+|+++..+...
T Consensus       114 ~~~~~~~~~~~~~~e~~~-------~~~~--~~~~ivrp~~~~~~~~~  152 (183)
T PF13460_consen  114 KPIFPEYARDKREAEEAL-------RESG--LNWTIVRPGWIYGNPSR  152 (183)
T ss_dssp             CGGGHHHHHHHHHHHHHH-------HHST--SEEEEEEESEEEBTTSS
T ss_pred             ccchhhhHHHHHHHHHHH-------HhcC--CCEEEEECcEeEeCCCc
Confidence            111234555554443222       2335  77888999999887633

...

>PRK05865 hypothetical protein; Provisional

Probab=99.40  E-value=1.1e-11  Score=118.14  Aligned_cols=132  Identities=21%  Similarity=0.181  Sum_probs=99.7

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      |+|+||||+|+||++++++|+++|++|++++|+....      .     ...+.++.+|+++.+++.++++       .+
T Consensus         1 MkILVTGATGfIGs~La~~Ll~~G~~Vv~l~R~~~~~------~-----~~~v~~v~gDL~D~~~l~~al~-------~v   62 (854)
T PRK05865          1 MRIAVTGASGVLGRGLTARLLSQGHEVVGIARHRPDS------W-----PSSADFIAADIRDATAVESAMT-------GA   62 (854)
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCchhh------c-----ccCceEEEeeCCCHHHHHHHHh-------CC
Confidence            6799999999999999999999999999999874321      1     2357889999999999887765       48


Q ss_pred             eEEEEcCCCCCCCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccccCCCC
Q 025509           81 NILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDP  160 (251)
Q Consensus        81 d~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~  160 (251)
                      |+|||+|+...+           .+++|+.++..+++++.    +.     +.++||++||.                  
T Consensus        63 D~VVHlAa~~~~-----------~~~vNv~GT~nLLeAa~----~~-----gvkr~V~iSS~------------------  104 (854)
T PRK05865         63 DVVAHCAWVRGR-----------NDHINIDGTANVLKAMA----ET-----GTGRIVFTSSG------------------  104 (854)
T ss_pred             CEEEECCCcccc-----------hHHHHHHHHHHHHHHHH----Hc-----CCCeEEEECCc------------------
Confidence            999999985321           46889999877766543    32     34689999982                  


Q ss_pred             CCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCc
Q 025509          161 SGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNI  208 (251)
Q Consensus       161 ~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~  208 (251)
                        .         |.+.+.+.+    +   .|  +.+..+.|+.+..|.
T Consensus       105 --~---------K~aaE~ll~----~---~g--l~~vILRp~~VYGP~  132 (854)
T PRK05865        105 --H---------QPRVEQMLA----D---CG--LEWVAVRCALIFGRN  132 (854)
T ss_pred             --H---------HHHHHHHHH----H---cC--CCEEEEEeceEeCCC
Confidence              1         776665443    2   35  677778998888764

>KOG4022 consensus Dihydropteridine reductase DHPR/QDPR [Amino acid transport and metabolism]

Probab=99.36  E-value=1e-10  Score=88.76  Aligned_cols=174  Identities=15%  Similarity=0.127  Sum_probs=125.4

Q ss_pred             EEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCc-eEEEEecCCCHHHHHHHHHHHHhcC--C
Q 025509            2 DIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAK-VDAMELDLSSLASVRNFASEYNIQH--H   78 (251)
Q Consensus         2 ~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~-v~~~~~D~~~~~~i~~~~~~~~~~~--g   78 (251)
                      +|+|.||-+.+|+++++.|...++-|.-++.++..             ..+ -.++..|-+=.|+-+.++++.-+..  -
T Consensus         5 rVivYGGkGALGSacv~~FkannywV~siDl~eNe-------------~Ad~sI~V~~~~swtEQe~~v~~~vg~sL~ge   71 (236)
T KOG4022|consen    5 RVIVYGGKGALGSACVEFFKANNYWVLSIDLSENE-------------QADSSILVDGNKSWTEQEQSVLEQVGSSLQGE   71 (236)
T ss_pred             eEEEEcCcchHhHHHHHHHHhcCeEEEEEeecccc-------------cccceEEecCCcchhHHHHHHHHHHHHhhccc
Confidence            69999999999999999999999999888876533             222 2333344443455555555554433  2


Q ss_pred             CeeEEEEcCCCCCCCCcCC---chhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccc
Q 025509           79 QLNILINNAGIMGTPFMLS---KDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFD  155 (251)
Q Consensus        79 ~id~lv~~ag~~~~~~~~~---~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~  155 (251)
                      ++|.+++-||.......-+   ...-+.++..++.......+.+..+++.       +|.+-+.+.-++..         
T Consensus        72 kvDav~CVAGGWAGGnAksKdl~KNaDLMwKQSvwtSaIsa~lAt~HLK~-------GGLL~LtGAkaAl~---------  135 (236)
T KOG4022|consen   72 KVDAVFCVAGGWAGGNAKSKDLVKNADLMWKQSVWTSAISAKLATTHLKP-------GGLLQLTGAKAALG---------  135 (236)
T ss_pred             ccceEEEeeccccCCCcchhhhhhchhhHHHHHHHHHHHHHHHHHhccCC-------CceeeecccccccC---------
Confidence            7999999998543211111   2344567788888877777777777754       56666666555444         


Q ss_pred             cCCCCCCCCcccccchhHHHHHHHHHHHHHHhc--cCCCcEEEEEeeCCcccCCcccCC
Q 025509          156 KINDPSGYNGFRAYSQSKLANILHANELARRLK--EDGVDITANSVHPGAIATNIIRHN  212 (251)
Q Consensus       156 ~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~--~~g~~i~v~~v~Pg~v~t~~~~~~  212 (251)
                            +.|++..|+.+|+|++.++++|+.+-.  +.|  -.+..|.|-.++|||.+.+
T Consensus       136 ------gTPgMIGYGMAKaAVHqLt~SLaak~SGlP~g--saa~~ilPVTLDTPMNRKw  186 (236)
T KOG4022|consen  136 ------GTPGMIGYGMAKAAVHQLTSSLAAKDSGLPDG--SAALTILPVTLDTPMNRKW  186 (236)
T ss_pred             ------CCCcccchhHHHHHHHHHHHHhcccccCCCCC--ceeEEEeeeeccCcccccc
Confidence                  889999999999999999999997643  334  6777899999999998865

>PF08643 DUF1776: Fungal family of unknown function (DUF1776); InterPro: IPR013952 This is a fungal protein of unknown function

Probab=99.36  E-value=5e-11  Score=100.42  Aligned_cols=182  Identities=20%  Similarity=0.165  Sum_probs=137.2

Q ss_pred             CEEEEECC-CChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCC-
Q 025509            1 MDIVITGA-TSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHH-   78 (251)
Q Consensus         1 k~vlItG~-s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g-   78 (251)
                      ++|||.|. +.-|++.+|..|.++||-|+++..+.+.......    +. ..++..+..|..++.++...+.+...... 
T Consensus         4 evVvI~Gs~~~PltR~la~DLeRRGFIV~v~~~~~ed~~~ve~----e~-~~dI~~L~ld~~~~~~~~~~l~~f~~~L~~   78 (299)
T PF08643_consen    4 EVVVIAGSPHDPLTRSLALDLERRGFIVYVTVSSAEDEKYVES----ED-RPDIRPLWLDDSDPSSIHASLSRFASLLSR   78 (299)
T ss_pred             eEEEEECCCCCccHHHHHHHHhhCCeEEEEEeCCHHHHHHHHh----cc-CCCCCCcccCCCCCcchHHHHHHHHHHhcC
Confidence            36889986 7999999999999999999999998655333322    22 34588888888766666655555443221 


Q ss_pred             -------------CeeEEEEcCCCC---CCCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcC-
Q 025509           79 -------------QLNILINNAGIM---GTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSS-  141 (251)
Q Consensus        79 -------------~id~lv~~ag~~---~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS-  141 (251)
                                   .+..||..-...   +|...++.+.|.+.++.|+..++.+++.++|+++.+.+   ...+||+++. 
T Consensus        79 p~~p~~~~~~h~l~L~svi~~Psl~yp~gPie~i~~s~~~~~ln~~ll~~~~~~q~lLPlL~~~~~---~~~~iil~~Ps  155 (299)
T PF08643_consen   79 PHVPFPGAPPHHLQLKSVIFIPSLSYPTGPIETISPSSWADELNTRLLTPILTIQGLLPLLRSRSN---QKSKIILFNPS  155 (299)
T ss_pred             CCCCCCCCCCceeEEEEEEEecCCCCCCCCccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccC---CCceEEEEeCc
Confidence                         466666665532   34668899999999999999999999999999998421   2467777664 


Q ss_pred             ccccccccCCcccccCCCCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCC
Q 025509          142 EGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATN  207 (251)
Q Consensus       142 ~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~  207 (251)
                      ....+               ..|..++-.....++.+|..+|++|+.+.+  |.|..+..|.++-.
T Consensus       156 i~ssl---------------~~PfhspE~~~~~al~~~~~~LrrEl~~~~--I~V~~i~LG~l~i~  204 (299)
T PF08643_consen  156 ISSSL---------------NPPFHSPESIVSSALSSFFTSLRRELRPHN--IDVTQIKLGNLDIG  204 (299)
T ss_pred             hhhcc---------------CCCccCHHHHHHHHHHHHHHHHHHHhhhcC--CceEEEEeeeeccc
Confidence            33333               456667778888999999999999999999  89999999988755

One of the proteins P32792 from SWISSPROT has been localised to the mitochondria [].

>PLN02260 probable rhamnose biosynthetic enzyme

Probab=99.33  E-value=6.5e-11  Score=112.04  Aligned_cols=141  Identities=18%  Similarity=0.166  Sum_probs=97.7

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      |+||||||+|.||++++++|.++|++|...                          ..|++|.+.+.+.+.+.     ++
T Consensus       381 mkiLVtGa~G~iG~~l~~~L~~~g~~v~~~--------------------------~~~l~d~~~v~~~i~~~-----~p  429 (668)
T PLN02260        381 LKFLIYGRTGWIGGLLGKLCEKQGIAYEYG--------------------------KGRLEDRSSLLADIRNV-----KP  429 (668)
T ss_pred             ceEEEECCCchHHHHHHHHHHhCCCeEEee--------------------------ccccccHHHHHHHHHhh-----CC
Confidence            579999999999999999999999887311                          13577888887777654     68


Q ss_pred             eEEEEcCCCCCCC-CcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCcccccccc-----CCccc
Q 025509           81 NILINNAGIMGTP-FMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYH-----EGIRF  154 (251)
Q Consensus        81 d~lv~~ag~~~~~-~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~-----~~~~~  154 (251)
                      |+|||+|+..... .+..+++.+..+++|+.++..+++++...          +.+++++||........     ...++
T Consensus       430 d~Vih~Aa~~~~~~~~~~~~~~~~~~~~N~~gt~~l~~a~~~~----------g~~~v~~Ss~~v~~~~~~~~~~~~~p~  499 (668)
T PLN02260        430 THVFNAAGVTGRPNVDWCESHKVETIRANVVGTLTLADVCREN----------GLLMMNFATGCIFEYDAKHPEGSGIGF  499 (668)
T ss_pred             CEEEECCcccCCCCCChHHhCHHHHHHHHhHHHHHHHHHHHHc----------CCeEEEEcccceecCCcccccccCCCC
Confidence            9999999975432 23334567788999999999999988654          23567777654322110     11233


Q ss_pred             ccCCCCCCCCcccccchhHHHHHHHHHHHH
Q 025509          155 DKINDPSGYNGFRAYSQSKLANILHANELA  184 (251)
Q Consensus       155 ~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la  184 (251)
                      .+-+.  +.+....|+.||.+.+.+++...
T Consensus       500 ~E~~~--~~~~~~~Yg~sK~~~E~~~~~~~  527 (668)
T PLN02260        500 KEEDK--PNFTGSFYSKTKAMVEELLREYD  527 (668)
T ss_pred             CcCCC--CCCCCChhhHHHHHHHHHHHhhh
Confidence            22211  22334689999999998887653

>TIGR01777 yfcH conserved hypothetical protein TIGR01777

Probab=99.33  E-value=1.6e-11  Score=104.09  Aligned_cols=169  Identities=17%  Similarity=0.058  Sum_probs=94.9

Q ss_pred             EEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCeeE
Q 025509            3 IVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQLNI   82 (251)
Q Consensus         3 vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~id~   82 (251)
                      ||||||+|.||.++++.|+++|++|++++|+........          ...  ..|+.. +..       .+....+|+
T Consensus         1 vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~----------~~~--~~~~~~-~~~-------~~~~~~~D~   60 (292)
T TIGR01777         1 ILITGGTGFIGRALTQRLTKDGHEVTILTRSPPAGANTK----------WEG--YKPWAP-LAE-------SEALEGADA   60 (292)
T ss_pred             CEEEcccchhhHHHHHHHHHcCCEEEEEeCCCCCCCccc----------cee--eecccc-cch-------hhhcCCCCE
Confidence            699999999999999999999999999999876532110          001  112221 111       122347999


Q ss_pred             EEEcCCCCCCCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccccCCCCCC
Q 025509           83 LINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSG  162 (251)
Q Consensus        83 lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~  162 (251)
                      |||+||..........+.....+++|+.++..+++++...-.+       ..+++..|+. +.++...+.++.+   ..+
T Consensus        61 Vvh~a~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~-------~~~~i~~S~~-~~yg~~~~~~~~E---~~~  129 (292)
T TIGR01777        61 VINLAGEPIADKRWTEERKQEIRDSRIDTTRALVEAIAAAEQK-------PKVFISASAV-GYYGTSEDRVFTE---EDS  129 (292)
T ss_pred             EEECCCCCcccccCCHHHHHHHHhcccHHHHHHHHHHHhcCCC-------ceEEEEeeeE-EEeCCCCCCCcCc---ccC
Confidence            9999996432222233455677889999988877776543110       1134434432 3333222222222   111


Q ss_pred             CCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCc
Q 025509          163 YNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNI  208 (251)
Q Consensus       163 ~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~  208 (251)
                      ......|+..+...+....    .+...+  +.+..+.|+.+..+.
T Consensus       130 ~~~~~~~~~~~~~~e~~~~----~~~~~~--~~~~ilR~~~v~G~~  169 (292)
T TIGR01777       130 PAGDDFLAELCRDWEEAAQ----AAEDLG--TRVVLLRTGIVLGPK  169 (292)
T ss_pred             CCCCChHHHHHHHHHHHhh----hchhcC--CceEEEeeeeEECCC
Confidence            1122223333333332222    233345  788889999998874

This model represents a clade of proteins of unknown function including the E. coli yfcH protein.

>COG3320 Putative dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]

Probab=99.32  E-value=1e-10  Score=100.33  Aligned_cols=182  Identities=23%  Similarity=0.247  Sum_probs=115.7

Q ss_pred             CEEEEECCCChhHHHHHHHHHHc-CCEEEEEecCch---hHHHHHHHHH-----hhCCCCceEEEEecCC------CHHH
Q 025509            1 MDIVITGATSGIGTETARVLALR-GVHVVMGVRDIA---AGKDVKETIV-----KEIPSAKVDAMELDLS------SLAS   65 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~-G~~Vi~~~r~~~---~~~~~~~~~~-----~~~~~~~v~~~~~D~~------~~~~   65 (251)
                      +++|+|||+|++|..+..+|+.+ .++|++..|-++   ...++.+.+.     ++....++.++..|++      +...
T Consensus         1 ~~vlLTGATGFLG~yLl~eLL~~~~~kv~cLVRA~s~E~a~~RL~~~~~~~~~~~e~~~~ri~vv~gDl~e~~lGL~~~~   80 (382)
T COG3320           1 RNVLLTGATGFLGAYLLLELLDRSDAKVICLVRAQSDEAALARLEKTFDLYRHWDELSADRVEVVAGDLAEPDLGLSERT   80 (382)
T ss_pred             CeEEEecCchHhHHHHHHHHHhcCCCcEEEEEecCCHHHHHHHHHHHhhhhhhhhhhhcceEEEEecccccccCCCCHHH
Confidence            57999999999999999999875 469988888543   1222222222     1122568999999998      3334


Q ss_pred             HHHHHHHHHhcCCCeeEEEEcCCCCCCCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCcccc
Q 025509           66 VRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHR  145 (251)
Q Consensus        66 i~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~  145 (251)
                      .+++.+       .+|.||||++...-..  +   -.+....|+.|+..+++.+...         ....+.++||++..
T Consensus        81 ~~~La~-------~vD~I~H~gA~Vn~v~--p---Ys~L~~~NVlGT~evlrLa~~g---------k~Kp~~yVSsisv~  139 (382)
T COG3320          81 WQELAE-------NVDLIIHNAALVNHVF--P---YSELRGANVLGTAEVLRLAATG---------KPKPLHYVSSISVG  139 (382)
T ss_pred             HHHHhh-------hcceEEecchhhcccC--c---HHHhcCcchHhHHHHHHHHhcC---------CCceeEEEeeeeec
Confidence            444433       6899999999643211  2   3455678999998887765332         12349999998754


Q ss_pred             ccccC---CcccccCC--CCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcc
Q 025509          146 LAYHE---GIRFDKIN--DPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNII  209 (251)
Q Consensus       146 ~~~~~---~~~~~~~~--~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~  209 (251)
                      .....   ...+++..  -.........|+.||.+.+.++    ++-.+.|  +++..+.||+|..+..
T Consensus       140 ~~~~~~~~~~~~~~~~~~~~~~~~~~~GY~~SKwvaE~Lv----r~A~~rG--Lpv~I~Rpg~I~gds~  202 (382)
T COG3320         140 ETEYYSNFTVDFDEISPTRNVGQGLAGGYGRSKWVAEKLV----REAGDRG--LPVTIFRPGYITGDSR  202 (382)
T ss_pred             cccccCCCccccccccccccccCccCCCcchhHHHHHHHH----HHHhhcC--CCeEEEecCeeeccCc
Confidence            33211   11122111  1122334468999999977654    4455557  6666699999965543

>KOG0747 consensus Putative NAD+-dependent epimerases [Carbohydrate transport and metabolism]

Probab=99.23  E-value=3.9e-11  Score=98.66  Aligned_cols=188  Identities=14%  Similarity=0.049  Sum_probs=129.9

Q ss_pred             CEEEEECCCChhHHHHHHHHHHc--CCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCC
Q 025509            1 MDIVITGATSGIGTETARVLALR--GVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHH   78 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~--G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g   78 (251)
                      |.+|||||.|.||++.+..++.+  .++.+.++.-.--..  ...+++..-..+..++..|+.+...+..++..     .
T Consensus         7 ~~vlItgg~gfi~Sn~~~~~~~~~p~~~~v~idkL~~~s~--~~~l~~~~n~p~ykfv~~di~~~~~~~~~~~~-----~   79 (331)
T KOG0747|consen    7 KNVLITGGAGFIGSNFINYLVDKYPDYKFVNLDKLDYCSN--LKNLEPVRNSPNYKFVEGDIADADLVLYLFET-----E   79 (331)
T ss_pred             ceEEEecCcCcchhhhhhhcccCCCCCcEEEEeecccccc--cchhhhhccCCCceEeeccccchHHHHhhhcc-----C
Confidence            57999999999999999999986  566665543211111  11222222256789999999998877766653     3


Q ss_pred             CeeEEEEcCCCCCCCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccccCC
Q 025509           79 QLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKIN  158 (251)
Q Consensus        79 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~  158 (251)
                      .+|.|+|.|+...  .+.+.-+.-..++.|++++..+++...-...-        .++|.+|+...... ..+.....  
T Consensus        80 ~id~vihfaa~t~--vd~s~~~~~~~~~nnil~t~~Lle~~~~sg~i--------~~fvhvSTdeVYGd-s~~~~~~~--  146 (331)
T KOG0747|consen   80 EIDTVIHFAAQTH--VDRSFGDSFEFTKNNILSTHVLLEAVRVSGNI--------RRFVHVSTDEVYGD-SDEDAVVG--  146 (331)
T ss_pred             chhhhhhhHhhhh--hhhhcCchHHHhcCCchhhhhHHHHHHhccCe--------eEEEEecccceecC-cccccccc--
Confidence            8999999998643  22333344556888999999988887666432        48999998764432 11111110  


Q ss_pred             CCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCCc
Q 025509          159 DPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRHNS  213 (251)
Q Consensus       159 ~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~~~  213 (251)
                      +.+...+..+|+++|+|.+++.+++.+.|+     +.+..+.-+.|..|-..+..
T Consensus       147 E~s~~nPtnpyAasKaAaE~~v~Sy~~sy~-----lpvv~~R~nnVYGP~q~~~k  196 (331)
T KOG0747|consen  147 EASLLNPTNPYAASKAAAEMLVRSYGRSYG-----LPVVTTRMNNVYGPNQYPEK  196 (331)
T ss_pred             ccccCCCCCchHHHHHHHHHHHHHHhhccC-----CcEEEEeccCccCCCcChHH
Confidence            223334456899999999999999999886     77777899999988765543

>TIGR02114 coaB_strep phosphopantothenate--cysteine ligase, streptococcal

Probab=99.22  E-value=3.3e-11  Score=99.00  Aligned_cols=85  Identities=12%  Similarity=0.192  Sum_probs=67.1

Q ss_pred             CChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCeeEEEEcCC
Q 025509            9 TSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQLNILINNAG   88 (251)
Q Consensus         9 s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~id~lv~~ag   88 (251)
                      |||||+++|++|+++|++|+++++.. .       +..   ..   ...+|+++.+++.++++.+.+.++++|++|||||
T Consensus        24 SGgIG~AIA~~la~~Ga~Vvlv~~~~-~-------l~~---~~---~~~~Dv~d~~s~~~l~~~v~~~~g~iDiLVnnAg   89 (227)
T TIGR02114        24 TGHLGKIITETFLSAGHEVTLVTTKR-A-------LKP---EP---HPNLSIREIETTKDLLITLKELVQEHDILIHSMA   89 (227)
T ss_pred             ccHHHHHHHHHHHHCCCEEEEEcChh-h-------ccc---cc---CCcceeecHHHHHHHHHHHHHHcCCCCEEEECCE
Confidence            68999999999999999999987631 1       100   00   2458999999999999999888999999999999


Q ss_pred             CCC--CCCcCCchhhHHHHHH
Q 025509           89 IMG--TPFMLSKDNIELQFAT  107 (251)
Q Consensus        89 ~~~--~~~~~~~~~~~~~~~~  107 (251)
                      +..  +..+.+.++|++++.+
T Consensus        90 v~d~~~~~~~s~e~~~~~~~~  110 (227)
T TIGR02114        90 VSDYTPVYMTDLEQVQASDNL  110 (227)
T ss_pred             eccccchhhCCHHHHhhhcch
Confidence            753  4566788888877554

In most bacteria, a single bifunctional protein catalyses phosphopantothenoylcysteine decarboxylase and phosphopantothenate--cysteine ligase activities, sequential steps in coenzyme A biosynthesis (see TIGR00521). These activities reside in separate proteins encoded by tandem genes in some bacterial lineages. This model describes proteins from the genera Streptococcus and Enterococcus homologous to the C-terminal region of TIGR00521, corresponding to phosphopantothenate--cysteine ligase activity.

>PLN02503 fatty acyl-CoA reductase 2

Probab=99.21  E-value=8.9e-10  Score=101.93  Aligned_cols=125  Identities=13%  Similarity=0.138  Sum_probs=86.1

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCC---EEEEEecCchh--H-HHHHHH---------HHhhCC-------CCceEEEEe
Q 025509            1 MDIVITGATSGIGTETARVLALRGV---HVVMGVRDIAA--G-KDVKET---------IVKEIP-------SAKVDAMEL   58 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~---~Vi~~~r~~~~--~-~~~~~~---------~~~~~~-------~~~v~~~~~   58 (251)
                      |+||||||+|.||+++++.|++.+.   +|++..|..+.  . +.+.++         +++..+       ..++.++..
T Consensus       120 k~VlVTGaTGFLGk~LlekLLr~~~~v~kIy~LvR~k~~~~a~eRl~~~l~~~~lf~~l~~~~g~~~~~~~~~Ki~~v~G  199 (605)
T PLN02503        120 KNFLITGATGFLAKVLIEKILRTNPDVGKIYLLIKAKDKEAAIERLKNEVIDAELFKCLQETHGKSYQSFMLSKLVPVVG  199 (605)
T ss_pred             CEEEEcCCchHHHHHHHHHHHHhCCCCcEEEEEEecCCchhHHHHHHHHHhhhhhHHHHHHhcCccccccccccEEEEEe
Confidence            6899999999999999999998653   67888885432  2 222112         222222       246889999


Q ss_pred             cCCCH------HHHHHHHHHHHhcCCCeeEEEEcCCCCCCCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCC
Q 025509           59 DLSSL------ASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGG  132 (251)
Q Consensus        59 D~~~~------~~i~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~  132 (251)
                      |++++      +..+.+.+       .+|+|||+|+....     .++.+..+++|+.++..+++.+...-        .
T Consensus       200 Dl~d~~LGLs~~~~~~L~~-------~vDiVIH~AA~v~f-----~~~~~~a~~vNV~GT~nLLelA~~~~--------~  259 (605)
T PLN02503        200 NVCESNLGLEPDLADEIAK-------EVDVIINSAANTTF-----DERYDVAIDINTRGPCHLMSFAKKCK--------K  259 (605)
T ss_pred             eCCCcccCCCHHHHHHHHh-------cCCEEEECcccccc-----ccCHHHHHHHHHHHHHHHHHHHHHcC--------C
Confidence            99986      23333222       58999999996431     24577889999999999988765431        1


Q ss_pred             CceEEEEcCcccc
Q 025509          133 EGRIINVSSEGHR  145 (251)
Q Consensus       133 ~g~iv~vsS~~~~  145 (251)
                      ..++|++||....
T Consensus       260 lk~fV~vSTayVy  272 (605)
T PLN02503        260 LKLFLQVSTAYVN  272 (605)
T ss_pred             CCeEEEccCceee
Confidence            2479999986543

>PRK08309 short chain dehydrogenase; Provisional

Probab=99.20  E-value=2.3e-10  Score=90.35  Aligned_cols=85  Identities=15%  Similarity=0.186  Sum_probs=71.2

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      |+++||||+ |+|.++++.|+++|++|++.+|+.+..+.....+..   ...+.++.+|++|++++.++++...+.++++
T Consensus         1 m~vlVtGGt-G~gg~la~~L~~~G~~V~v~~R~~~~~~~l~~~l~~---~~~i~~~~~Dv~d~~sv~~~i~~~l~~~g~i   76 (177)
T PRK08309          1 MHALVIGGT-GMLKRVSLWLCEKGFHVSVIARREVKLENVKRESTT---PESITPLPLDYHDDDALKLAIKSTIEKNGPF   76 (177)
T ss_pred             CEEEEECcC-HHHHHHHHHHHHCcCEEEEEECCHHHHHHHHHHhhc---CCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            689999998 777789999999999999999987766665544421   3468889999999999999999998888899


Q ss_pred             eEEEEcCCC
Q 025509           81 NILINNAGI   89 (251)
Q Consensus        81 d~lv~~ag~   89 (251)
                      |++|+.+-.
T Consensus        77 d~lv~~vh~   85 (177)
T PRK08309         77 DLAVAWIHS   85 (177)
T ss_pred             eEEEEeccc
Confidence            999987753

>TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase

Probab=99.15  E-value=1.7e-09  Score=110.14  Aligned_cols=184  Identities=21%  Similarity=0.183  Sum_probs=114.2

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcC----CEEEEEecCchhHHHHHHHHHhh---C------CCCceEEEEecCCCHHH--
Q 025509            1 MDIVITGATSGIGTETARVLALRG----VHVVMGVRDIAAGKDVKETIVKE---I------PSAKVDAMELDLSSLAS--   65 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G----~~Vi~~~r~~~~~~~~~~~~~~~---~------~~~~v~~~~~D~~~~~~--   65 (251)
                      ++|||||++|+||.+++++|++.+    ++|++..|+....... +.+.+.   +      ...++.++..|++++.-  
T Consensus       972 ~~VlvTGatGflG~~l~~~Ll~~~~~~~~~V~~l~R~~~~~~~~-~~l~~~~~~~~~~~~~~~~~i~~~~gDl~~~~lgl 1050 (1389)
T TIGR03443       972 ITVFLTGATGFLGSFILRDLLTRRSNSNFKVFAHVRAKSEEAGL-ERLRKTGTTYGIWDEEWASRIEVVLGDLSKEKFGL 1050 (1389)
T ss_pred             ceEEEeCCccccHHHHHHHHHhcCCCCCcEEEEEECcCChHHHH-HHHHHHHHHhCCCchhhhcceEEEeccCCCccCCc
Confidence            479999999999999999999887    6899888975443221 222111   0      01368899999975410  


Q ss_pred             HHHHHHHHHhcCCCeeEEEEcCCCCCCCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCcccc
Q 025509           66 VRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHR  145 (251)
Q Consensus        66 i~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~  145 (251)
                      -...++++.   ..+|++||||+....  ..   ........|+.|+..+++.+...         +..+++++||.+..
T Consensus      1051 ~~~~~~~l~---~~~d~iiH~Aa~~~~--~~---~~~~~~~~nv~gt~~ll~~a~~~---------~~~~~v~vSS~~v~ 1113 (1389)
T TIGR03443      1051 SDEKWSDLT---NEVDVIIHNGALVHW--VY---PYSKLRDANVIGTINVLNLCAEG---------KAKQFSFVSSTSAL 1113 (1389)
T ss_pred             CHHHHHHHH---hcCCEEEECCcEecC--cc---CHHHHHHhHHHHHHHHHHHHHhC---------CCceEEEEeCeeec
Confidence            011122222   268999999986431  11   23445567999999888876432         23489999997654


Q ss_pred             cccc-----------C--CcccccCCCCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCc
Q 025509          146 LAYH-----------E--GIRFDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNI  208 (251)
Q Consensus       146 ~~~~-----------~--~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~  208 (251)
                      ....           .  ..+-.+............|+.||.+.+.+++..+.    .|  +.+..+.||.|..+.
T Consensus      1114 ~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~Y~~sK~~aE~l~~~~~~----~g--~~~~i~Rpg~v~G~~ 1183 (1389)
T TIGR03443      1114 DTEYYVNLSDELVQAGGAGIPESDDLMGSSKGLGTGYGQSKWVAEYIIREAGK----RG--LRGCIVRPGYVTGDS 1183 (1389)
T ss_pred             CcccccchhhhhhhccCCCCCcccccccccccCCCChHHHHHHHHHHHHHHHh----CC--CCEEEECCCccccCC
Confidence            2110           0  00000000001111234699999999888776432    36  778889999998764

Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal.

>COG1089 Gmd GDP-D-mannose dehydratase [Cell envelope biogenesis, outer membrane]

Probab=99.11  E-value=3.5e-10  Score=93.21  Aligned_cols=182  Identities=16%  Similarity=0.106  Sum_probs=128.5

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHh-h-CCCCceEEEEecCCCHHHHHHHHHHHHhcCC
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVK-E-IPSAKVDAMELDLSSLASVRNFASEYNIQHH   78 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~-~-~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g   78 (251)
                      |++||||-+|--|.-+|+.|+++|+.|..+.|.........-.+.+ . ..+.++.++.+|++|...+.++++++     
T Consensus         3 K~ALITGITGQDGsYLa~lLLekGY~VhGi~Rrss~~n~~ri~L~~~~~~~~~~l~l~~gDLtD~~~l~r~l~~v-----   77 (345)
T COG1089           3 KVALITGITGQDGSYLAELLLEKGYEVHGIKRRSSSFNTPRIHLYEDPHLNDPRLHLHYGDLTDSSNLLRILEEV-----   77 (345)
T ss_pred             ceEEEecccCCchHHHHHHHHhcCcEEEEEeeccccCCcccceeccccccCCceeEEEeccccchHHHHHHHHhc-----
Confidence            6899999999999999999999999999888753221111001111 1 11345889999999999999999987     


Q ss_pred             CeeEEEEcCCCCCCCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccccCC
Q 025509           79 QLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKIN  158 (251)
Q Consensus        79 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~  158 (251)
                      .+|-+.|-|+-  ++...|++..+...+++.+|++.++.+..-.-.       ...|+..-||+- .++....   .+-+
T Consensus        78 ~PdEIYNLaAQ--S~V~vSFe~P~~T~~~~~iGtlrlLEaiR~~~~-------~~~rfYQAStSE-~fG~v~~---~pq~  144 (345)
T COG1089          78 QPDEIYNLAAQ--SHVGVSFEQPEYTADVDAIGTLRLLEAIRILGE-------KKTRFYQASTSE-LYGLVQE---IPQK  144 (345)
T ss_pred             Cchhheecccc--ccccccccCcceeeeechhHHHHHHHHHHHhCC-------cccEEEecccHH-hhcCccc---Cccc
Confidence            78999998874  234457777888899999999999988765542       145787777642 2221111   1233


Q ss_pred             CCCCCCcccccchhHHHHHHHHHHHHHHhcc---CCCcEEEEEeeCC
Q 025509          159 DPSGYNGFRAYSQSKLANILHANELARRLKE---DGVDITANSVHPG  202 (251)
Q Consensus       159 ~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~---~g~~i~v~~v~Pg  202 (251)
                      +..|+.+.++|+++|....-++...+..|+-   .|  |-+|+=+|.
T Consensus       145 E~TPFyPrSPYAvAKlYa~W~tvNYResYgl~AcnG--ILFNHESP~  189 (345)
T COG1089         145 ETTPFYPRSPYAVAKLYAYWITVNYRESYGLFACNG--ILFNHESPL  189 (345)
T ss_pred             cCCCCCCCCHHHHHHHHHHheeeehHhhcCceeecc--eeecCCCCC
Confidence            4457778889999999877777777666543   34  777766664

>TIGR03649 ergot_EASG ergot alkaloid biosynthesis protein, AFUA_2G17970 family

Probab=99.05  E-value=3.2e-09  Score=90.09  Aligned_cols=76  Identities=17%  Similarity=0.150  Sum_probs=61.5

Q ss_pred             EEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCC-e
Q 025509            2 DIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQ-L   80 (251)
Q Consensus         2 ~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~-i   80 (251)
                      +||||||+|.||++++++|.++|++|.+..|++++..           ...+..+.+|+.|.+++.+.++.. ....+ +
T Consensus         1 ~ilVtGatG~iG~~vv~~L~~~g~~V~~~~R~~~~~~-----------~~~~~~~~~d~~d~~~l~~a~~~~-~~~~g~~   68 (285)
T TIGR03649         1 TILLTGGTGKTASRIARLLQAASVPFLVASRSSSSSA-----------GPNEKHVKFDWLDEDTWDNPFSSD-DGMEPEI   68 (285)
T ss_pred             CEEEEcCCChHHHHHHHHHHhCCCcEEEEeCCCcccc-----------CCCCccccccCCCHHHHHHHHhcc-cCcCCce
Confidence            4899999999999999999999999999999876431           124666788999999999888653 22335 9


Q ss_pred             eEEEEcCCC
Q 025509           81 NILINNAGI   89 (251)
Q Consensus        81 d~lv~~ag~   89 (251)
                      |.++++++.
T Consensus        69 d~v~~~~~~   77 (285)
T TIGR03649        69 SAVYLVAPP   77 (285)
T ss_pred             eEEEEeCCC
Confidence            999999863

This family consists of fungal proteins of unknown function associated with secondary metabolite biosynthesis, such as of the ergot alkaloids such as ergovaline. Nomenclature differs because gene order differs - this is EasG in Neotyphodium lolii but is designated ergot alkaloid biosynthetic protein A in several other fungi.

>PLN00016 RNA-binding protein; Provisional

Probab=99.03  E-value=6.3e-09  Score=92.01  Aligned_cols=157  Identities=18%  Similarity=0.154  Sum_probs=94.3

Q ss_pred             CEEEEE----CCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHH----HHHhhCCCCceEEEEecCCCHHHHHHHHHH
Q 025509            1 MDIVIT----GATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKE----TIVKEIPSAKVDAMELDLSSLASVRNFASE   72 (251)
Q Consensus         1 k~vlIt----G~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~----~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~   72 (251)
                      |+||||    ||+|.||.+++++|+++|++|++++|+.........    ...+ .....+.++.+|+.+   +..++. 
T Consensus        53 ~~VLVt~~~~GatG~iG~~lv~~L~~~G~~V~~l~R~~~~~~~~~~~~~~~~~~-l~~~~v~~v~~D~~d---~~~~~~-  127 (378)
T PLN00016         53 KKVLIVNTNSGGHAFIGFYLAKELVKAGHEVTLFTRGKEPSQKMKKEPFSRFSE-LSSAGVKTVWGDPAD---VKSKVA-  127 (378)
T ss_pred             ceEEEEeccCCCceeEhHHHHHHHHHCCCEEEEEecCCcchhhhccCchhhhhH-hhhcCceEEEecHHH---HHhhhc-
Confidence            479999    999999999999999999999999998654322210    0000 112347888899866   333221 


Q ss_pred             HHhcCCCeeEEEEcCCCCCCCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCc
Q 025509           73 YNIQHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGI  152 (251)
Q Consensus        73 ~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~  152 (251)
                          ..++|+|||+++.       .   .        .+    ++.++..+++.     +-.++|++||..... .....
T Consensus       128 ----~~~~d~Vi~~~~~-------~---~--------~~----~~~ll~aa~~~-----gvkr~V~~SS~~vyg-~~~~~  175 (378)
T PLN00016        128 ----GAGFDVVYDNNGK-------D---L--------DE----VEPVADWAKSP-----GLKQFLFCSSAGVYK-KSDEP  175 (378)
T ss_pred             ----cCCccEEEeCCCC-------C---H--------HH----HHHHHHHHHHc-----CCCEEEEEccHhhcC-CCCCC
Confidence                1369999999762       0   1        11    22333444332     345899999975432 11111


Q ss_pred             ccccCCCCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCccc
Q 025509          153 RFDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIR  210 (251)
Q Consensus       153 ~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~  210 (251)
                      ++.+   ..+..   ++. +|...+.+.+       ..+  +.+..+.|+++..+...
T Consensus       176 p~~E---~~~~~---p~~-sK~~~E~~l~-------~~~--l~~~ilRp~~vyG~~~~  217 (378)
T PLN00016        176 PHVE---GDAVK---PKA-GHLEVEAYLQ-------KLG--VNWTSFRPQYIYGPGNN  217 (378)
T ss_pred             CCCC---CCcCC---Ccc-hHHHHHHHHH-------HcC--CCeEEEeceeEECCCCC
Confidence            2111   11111   122 7877775543       235  77778999999887643

>PRK12320 hypothetical protein; Provisional

Probab=99.01  E-value=4.6e-09  Score=98.47  Aligned_cols=104  Identities=20%  Similarity=0.211  Sum_probs=76.9

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      |+||||||+|.||++++++|.++|++|++++|+....           ....+.++.+|+++.. +.+++       .++
T Consensus         1 MkILVTGAaGFIGs~La~~Ll~~G~~Vi~ldr~~~~~-----------~~~~ve~v~~Dl~d~~-l~~al-------~~~   61 (699)
T PRK12320          1 MQILVTDATGAVGRSVTRQLIAAGHTVSGIAQHPHDA-----------LDPRVDYVCASLRNPV-LQELA-------GEA   61 (699)
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCEEEEEeCChhhc-----------ccCCceEEEccCCCHH-HHHHh-------cCC
Confidence            5799999999999999999999999999999864320           0235888999999873 33322       258


Q ss_pred             eEEEEcCCCCCCCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCcc
Q 025509           81 NILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEG  143 (251)
Q Consensus        81 d~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~  143 (251)
                      |+|||+|+....      +    ..++|+.++.++++++...          +.++|++||..
T Consensus        62 D~VIHLAa~~~~------~----~~~vNv~Gt~nLleAA~~~----------GvRiV~~SS~~  104 (699)
T PRK12320         62 DAVIHLAPVDTS------A----PGGVGITGLAHVANAAARA----------GARLLFVSQAA  104 (699)
T ss_pred             CEEEEcCccCcc------c----hhhHHHHHHHHHHHHHHHc----------CCeEEEEECCC
Confidence            999999985211      1    1257889988888776432          34899999853

>KOG1429 consensus dTDP-glucose 4-6-dehydratase/UDP-glucuronic acid decarboxylase [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis]

Probab=98.95  E-value=9.8e-09  Score=84.76  Aligned_cols=174  Identities=14%  Similarity=0.129  Sum_probs=112.5

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      ++|+||||+|+||+++|..|..+|+.|++.+--...   .++.+........+..+.-|+..+     ++.       .+
T Consensus        28 lrI~itGgaGFIgSHLvdkLm~egh~VIa~Dn~ftg---~k~n~~~~~~~~~fel~~hdv~~p-----l~~-------ev   92 (350)
T KOG1429|consen   28 LRILITGGAGFIGSHLVDKLMTEGHEVIALDNYFTG---RKENLEHWIGHPNFELIRHDVVEP-----LLK-------EV   92 (350)
T ss_pred             cEEEEecCcchHHHHHHHHHHhcCCeEEEEeccccc---chhhcchhccCcceeEEEeechhH-----HHH-------Hh
Confidence            479999999999999999999999999998853222   112222222244567777777654     333       46


Q ss_pred             eEEEEcCCCCCC-CCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCc-----cc
Q 025509           81 NILINNAGIMGT-PFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGI-----RF  154 (251)
Q Consensus        81 d~lv~~ag~~~~-~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~-----~~  154 (251)
                      |.++|-|....| ....+   .-+.+..|+++++.++..+.+-          +.|++..|+.- .++.+..+     +|
T Consensus        93 D~IyhLAapasp~~y~~n---pvktIktN~igtln~lglakrv----------~aR~l~aSTse-VYgdp~~hpq~e~yw  158 (350)
T KOG1429|consen   93 DQIYHLAAPASPPHYKYN---PVKTIKTNVIGTLNMLGLAKRV----------GARFLLASTSE-VYGDPLVHPQVETYW  158 (350)
T ss_pred             hhhhhhccCCCCcccccC---ccceeeecchhhHHHHHHHHHh----------CceEEEeeccc-ccCCcccCCCccccc
Confidence            788888886544 22222   3445788999999988776544          35888888754 33433332     34


Q ss_pred             ccCCCCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccC
Q 025509          155 DKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  211 (251)
Q Consensus       155 ~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  211 (251)
                      ..+.   +....+.|...|...+.|+....++   .|  |.+-...+-.+..|-+.-
T Consensus       159 g~vn---pigpr~cydegKr~aE~L~~~y~k~---~g--iE~rIaRifNtyGPrm~~  207 (350)
T KOG1429|consen  159 GNVN---PIGPRSCYDEGKRVAETLCYAYHKQ---EG--IEVRIARIFNTYGPRMHM  207 (350)
T ss_pred             cccC---cCCchhhhhHHHHHHHHHHHHhhcc---cC--cEEEEEeeecccCCcccc
Confidence            3332   3445679999998877655544433   35  444447887887776553

>COG1090 Predicted nucleoside-diphosphate sugar epimerase [General function prediction only]

Probab=98.75  E-value=2.4e-07  Score=76.50  Aligned_cols=163  Identities=14%  Similarity=0.076  Sum_probs=93.6

Q ss_pred             EEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCeeE
Q 025509            3 IVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQLNI   82 (251)
Q Consensus         3 vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~id~   82 (251)
                      |+||||+|.||++++.+|.+.|+.|++..|+..+.+...        ...+.       ..+.+....+      .++|+
T Consensus         1 IliTGgTGlIG~~L~~~L~~~gh~v~iltR~~~~~~~~~--------~~~v~-------~~~~~~~~~~------~~~Da   59 (297)
T COG1090           1 ILITGGTGLIGRALTARLRKGGHQVTILTRRPPKASQNL--------HPNVT-------LWEGLADALT------LGIDA   59 (297)
T ss_pred             CeEeccccchhHHHHHHHHhCCCeEEEEEcCCcchhhhc--------Ccccc-------ccchhhhccc------CCCCE
Confidence            689999999999999999999999999999876644321        11111       1122221111      27999


Q ss_pred             EEEcCCCCCCCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccccCCCCCC
Q 025509           83 LINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSG  162 (251)
Q Consensus        83 lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~  162 (251)
                      |||-||..-.....+.+.=+..++..    +..++.+.....+..    ++.++.+=+|+.|.++...+..+++.   .+
T Consensus        60 vINLAG~~I~~rrWt~~~K~~i~~SR----i~~T~~L~e~I~~~~----~~P~~~isaSAvGyYG~~~~~~~tE~---~~  128 (297)
T COG1090          60 VINLAGEPIAERRWTEKQKEEIRQSR----INTTEKLVELIAASE----TKPKVLISASAVGYYGHSGDRVVTEE---SP  128 (297)
T ss_pred             EEECCCCccccccCCHHHHHHHHHHH----hHHHHHHHHHHHhcc----CCCcEEEecceEEEecCCCceeeecC---CC
Confidence            99999952111112333334444444    444555555554331    23455555556667765555555442   11


Q ss_pred             CCcccccchhHHHHHHHHHHHHHHh---ccCCCcEEEEEeeCCcccCC
Q 025509          163 YNGFRAYSQSKLANILHANELARRL---KEDGVDITANSVHPGAIATN  207 (251)
Q Consensus       163 ~~~~~~Y~~sK~a~~~~~~~la~e~---~~~g~~i~v~~v~Pg~v~t~  207 (251)
                      ..        .-.+..+++.|-.+.   ...|  +||+.+.-|.|..+
T Consensus       129 ~g--------~~Fla~lc~~WE~~a~~a~~~g--tRvvllRtGvVLs~  166 (297)
T COG1090         129 PG--------DDFLAQLCQDWEEEALQAQQLG--TRVVLLRTGVVLSP  166 (297)
T ss_pred             CC--------CChHHHHHHHHHHHHhhhhhcC--ceEEEEEEEEEecC
Confidence            11        112233444454443   3335  99999999998764

>PRK06732 phosphopantothenate--cysteine ligase; Validated

Probab=98.74  E-value=3.8e-08  Score=80.98  Aligned_cols=93  Identities=14%  Similarity=0.215  Sum_probs=59.1

Q ss_pred             EECCC-ChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCeeEE
Q 025509            5 ITGAT-SGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQLNIL   83 (251)
Q Consensus         5 ItG~s-~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~id~l   83 (251)
                      ||+.| |+||+++|++|+++|++|++++|+...        .. .+...+.++.++  +.+++...+   .+..+.+|+|
T Consensus        20 itN~SSG~iG~aLA~~L~~~G~~V~li~r~~~~--------~~-~~~~~v~~i~v~--s~~~m~~~l---~~~~~~~Div   85 (229)
T PRK06732         20 ITNHSTGQLGKIIAETFLAAGHEVTLVTTKTAV--------KP-EPHPNLSIIEIE--NVDDLLETL---EPLVKDHDVL   85 (229)
T ss_pred             ecCccchHHHHHHHHHHHhCCCEEEEEECcccc--------cC-CCCCCeEEEEEe--cHHHHHHHH---HHHhcCCCEE
Confidence            34334 569999999999999999999875421        00 012345555542  333333322   2333578999


Q ss_pred             EEcCCCCC--CCCcCCchhhHHHHHHHHHH
Q 025509           84 INNAGIMG--TPFMLSKDNIELQFATNHLG  111 (251)
Q Consensus        84 v~~ag~~~--~~~~~~~~~~~~~~~~n~~~  111 (251)
                      |||||+..  +....+.++|..++++|..-
T Consensus        86 Ih~AAvsd~~~~~~~~~~~~~~~~~v~~~~  115 (229)
T PRK06732         86 IHSMAVSDYTPVYMTDLEEVSASDNLNEFL  115 (229)
T ss_pred             EeCCccCCceehhhhhhhhhhhhhhhhhhh
Confidence            99999754  33445677888888887544

>PRK05579 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated

Probab=98.74  E-value=4.2e-08  Score=86.90  Aligned_cols=74  Identities=23%  Similarity=0.286  Sum_probs=57.9

Q ss_pred             CEEEEECC----------------CChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHH
Q 025509            1 MDIVITGA----------------TSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLA   64 (251)
Q Consensus         1 k~vlItG~----------------s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~   64 (251)
                      |++|||||                ||++|+++|++|+++|++|++++++.. ..         .+ .  .+..+|+++.+
T Consensus       189 k~vlITgG~T~E~ID~VR~isN~SSG~~G~aiA~~l~~~Ga~V~~v~~~~~-~~---------~~-~--~~~~~dv~~~~  255 (399)
T PRK05579        189 KRVLITAGPTREPIDPVRYITNRSSGKMGYALARAAARRGADVTLVSGPVN-LP---------TP-A--GVKRIDVESAQ  255 (399)
T ss_pred             CEEEEeCCCccccccceeeeccCCcchHHHHHHHHHHHCCCEEEEeCCCcc-cc---------CC-C--CcEEEccCCHH
Confidence            57999999                455999999999999999999998652 11         11 1  13467999988


Q ss_pred             HHHHHHHHHHhcCCCeeEEEEcCCCC
Q 025509           65 SVRNFASEYNIQHHQLNILINNAGIM   90 (251)
Q Consensus        65 ~i~~~~~~~~~~~g~id~lv~~ag~~   90 (251)
                      ++.+.+.+   .++++|++|+|||+.
T Consensus       256 ~~~~~v~~---~~~~~DilI~~Aav~  278 (399)
T PRK05579        256 EMLDAVLA---ALPQADIFIMAAAVA  278 (399)
T ss_pred             HHHHHHHH---hcCCCCEEEEccccc
Confidence            88777663   467899999999975

>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA

Probab=98.71  E-value=3.4e-07  Score=75.37  Aligned_cols=74  Identities=23%  Similarity=0.271  Sum_probs=58.5

Q ss_pred             EEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCeeE
Q 025509            3 IVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQLNI   82 (251)
Q Consensus         3 vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~id~   82 (251)
                      |+|+||+|.+|+.+++.|.+.|++|.+..|+..+  +..+++++    ..+.++.+|+.|.+++.+.++       ++|.
T Consensus         1 I~V~GatG~~G~~v~~~L~~~~~~V~~l~R~~~~--~~~~~l~~----~g~~vv~~d~~~~~~l~~al~-------g~d~   67 (233)
T PF05368_consen    1 ILVTGATGNQGRSVVRALLSAGFSVRALVRDPSS--DRAQQLQA----LGAEVVEADYDDPESLVAALK-------GVDA   67 (233)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTGCEEEEESSSHH--HHHHHHHH----TTTEEEES-TT-HHHHHHHHT-------TCSE
T ss_pred             CEEECCccHHHHHHHHHHHhCCCCcEEEEeccch--hhhhhhhc----ccceEeecccCCHHHHHHHHc-------CCce
Confidence            7999999999999999999999999999998732  22333333    245677999999999988777       7899


Q ss_pred             EEEcCCC
Q 025509           83 LINNAGI   89 (251)
Q Consensus        83 lv~~ag~   89 (251)
                      |+++.+.
T Consensus        68 v~~~~~~   74 (233)
T PF05368_consen   68 VFSVTPP   74 (233)
T ss_dssp             EEEESSC
T ss_pred             EEeecCc
Confidence            9998874

NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....

>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=98.70  E-value=1.4e-07  Score=85.27  Aligned_cols=124  Identities=17%  Similarity=0.121  Sum_probs=84.3

Q ss_pred             EEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCeeEE
Q 025509            4 VITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQLNIL   83 (251)
Q Consensus         4 lItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~id~l   83 (251)
                      +|+||++|+|.++++.|...|+.|+.+.+...+.                                   ...+..+++.+
T Consensus        42 ~l~~~~~g~~~~~~~~~~~~g~~v~~~~~~~~~~-----------------------------------~~~~~~~~~~~   86 (450)
T PRK08261         42 VLVGGAGRLAEALAALLAGLGYDVVANNDGGLTW-----------------------------------AAGWGDRFGAL   86 (450)
T ss_pred             eEEccCchhHHHHHHHHhhCCCeeeecCcccccc-----------------------------------ccCcCCcccEE
Confidence            3888899999999999999999999876654310                                   00011234433


Q ss_pred             EEcCCCCCCCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccccCCCCCCC
Q 025509           84 INNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGY  163 (251)
Q Consensus        84 v~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~  163 (251)
                      ++-+.-.     .+.++        +.+.+.+++..++.|..       .|+||+++|..+..                 
T Consensus        87 ~~d~~~~-----~~~~~--------l~~~~~~~~~~l~~l~~-------~griv~i~s~~~~~-----------------  129 (450)
T PRK08261         87 VFDATGI-----TDPAD--------LKALYEFFHPVLRSLAP-------CGRVVVLGRPPEAA-----------------  129 (450)
T ss_pred             EEECCCC-----CCHHH--------HHHHHHHHHHHHHhccC-------CCEEEEEccccccC-----------------
Confidence            3322110     01111        12334566667777643       58999999965432                 


Q ss_pred             CcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCc
Q 025509          164 NGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGA  203 (251)
Q Consensus       164 ~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~  203 (251)
                       ....|+.+|+++.+|++++++|+ +.|  ++++.|.|+.
T Consensus       130 -~~~~~~~akaal~gl~rsla~E~-~~g--i~v~~i~~~~  165 (450)
T PRK08261        130 -ADPAAAAAQRALEGFTRSLGKEL-RRG--ATAQLVYVAP  165 (450)
T ss_pred             -CchHHHHHHHHHHHHHHHHHHHh-hcC--CEEEEEecCC
Confidence             23469999999999999999999 678  9999999986

>PRK12548 shikimate 5-dehydrogenase; Provisional

Probab=98.67  E-value=1.5e-07  Score=80.23  Aligned_cols=80  Identities=19%  Similarity=0.220  Sum_probs=61.4

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCE-EEEEecCc---hhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhc
Q 025509            1 MDIVITGATSGIGTETARVLALRGVH-VVMGVRDI---AAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQ   76 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~-Vi~~~r~~---~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~   76 (251)
                      |+++|+|+ ||+|++++..|++.|++ |++++|+.   ++++++.+++.+..  ..+.+..+|+++.+++...++     
T Consensus       127 k~vlI~GA-GGagrAia~~La~~G~~~V~I~~R~~~~~~~a~~l~~~l~~~~--~~~~~~~~d~~~~~~~~~~~~-----  198 (289)
T PRK12548        127 KKLTVIGA-GGAATAIQVQCALDGAKEITIFNIKDDFYERAEQTAEKIKQEV--PECIVNVYDLNDTEKLKAEIA-----  198 (289)
T ss_pred             CEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCchHHHHHHHHHHHHhhcC--CCceeEEechhhhhHHHhhhc-----
Confidence            57999999 69999999999999995 99999987   66777776664432  245566788887777665443     


Q ss_pred             CCCeeEEEEcCCCC
Q 025509           77 HHQLNILINNAGIM   90 (251)
Q Consensus        77 ~g~id~lv~~ag~~   90 (251)
                        ..|+||||..+.
T Consensus       199 --~~DilINaTp~G  210 (289)
T PRK12548        199 --SSDILVNATLVG  210 (289)
T ss_pred             --cCCEEEEeCCCC
Confidence              459999998754

>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]

Probab=98.61  E-value=1.5e-07  Score=90.10  Aligned_cols=161  Identities=16%  Similarity=0.138  Sum_probs=123.2

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCC-EEEEEecCchhHHH---HHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhc
Q 025509            1 MDIVITGATSGIGTETARVLALRGV-HVVMGVRDIAAGKD---VKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQ   76 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~-~Vi~~~r~~~~~~~---~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~   76 (251)
                      |.++|+||-||.|.++|.+|.++|+ ++++++|+.-+.-=   ......+.  +..|.+-..|++..+...+++++. .+
T Consensus      1769 ksYii~GGLGGFGLELaqWLi~RGar~lVLtSRsGirtGYQa~~vrrWr~~--GVqV~vsT~nitt~~ga~~Li~~s-~k 1845 (2376)
T KOG1202|consen 1769 KSYIIVGGLGGFGLELAQWLIQRGARKLVLTSRSGIRTGYQALMVRRWRRR--GVQVQVSTSNITTAEGARGLIEES-NK 1845 (2376)
T ss_pred             ceEEEeccccchhHHHHHHHHhcCceEEEEeccccchhhHHHHHHHHHHhc--CeEEEEecccchhhhhHHHHHHHh-hh
Confidence            5789999999999999999999999 68999998544222   22222222  566777778898888888888875 35


Q ss_pred             CCCeeEEEEcCCCCCC--CCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCccc
Q 025509           77 HHQLNILINNAGIMGT--PFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRF  154 (251)
Q Consensus        77 ~g~id~lv~~ag~~~~--~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~  154 (251)
                      .+++-.++|-|.+...  +.+.+++++++.-+-.+.++.++-+.-....-.       --.+|.+||.+.-         
T Consensus      1846 l~~vGGiFnLA~VLRD~LiEnQt~knFk~va~pK~~~Ti~LD~~sRe~C~~-------LdyFv~FSSvscG--------- 1909 (2376)
T KOG1202|consen 1846 LGPVGGIFNLAAVLRDGLIENQTPKNFKDVAKPKYSGTINLDRVSREICPE-------LDYFVVFSSVSCG--------- 1909 (2376)
T ss_pred             cccccchhhHHHHHHhhhhcccChhHHHhhhccceeeeeehhhhhhhhCcc-------cceEEEEEeeccc---------
Confidence            6788899999986644  567899999999999999999987776655432       2378889985543         


Q ss_pred             ccCCCCCCCCcccccchhHHHHHHHHHHHHHH
Q 025509          155 DKINDPSGYNGFRAYSQSKLANILHANELARR  186 (251)
Q Consensus       155 ~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e  186 (251)
                            ++..+++.|+-+..+++.++..-..+
T Consensus      1910 ------RGN~GQtNYG~aNS~MERiceqRr~~ 1935 (2376)
T KOG1202|consen 1910 ------RGNAGQTNYGLANSAMERICEQRRHE 1935 (2376)
T ss_pred             ------CCCCcccccchhhHHHHHHHHHhhhc
Confidence                  36778899999999999887654433

>cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase

Probab=98.58  E-value=6.2e-07  Score=71.94  Aligned_cols=79  Identities=18%  Similarity=0.245  Sum_probs=63.3

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      ++++|+||+|++|+++++.|++.|++|++++|+.+++++..+.+.+..   ...+..+|..+.+++.+.++       ..
T Consensus        29 ~~vlVlGgtG~iG~~~a~~l~~~g~~V~l~~R~~~~~~~l~~~l~~~~---~~~~~~~~~~~~~~~~~~~~-------~~   98 (194)
T cd01078          29 KTAVVLGGTGPVGQRAAVLLAREGARVVLVGRDLERAQKAADSLRARF---GEGVGAVETSDDAARAAAIK-------GA   98 (194)
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhhc---CCcEEEeeCCCHHHHHHHHh-------cC
Confidence            479999999999999999999999999999999888888777765432   23455678888888776554       57


Q ss_pred             eEEEEcCCC
Q 025509           81 NILINNAGI   89 (251)
Q Consensus        81 d~lv~~ag~   89 (251)
                      |+||++.+.
T Consensus        99 diVi~at~~  107 (194)
T cd01078          99 DVVFAAGAA  107 (194)
T ss_pred             CEEEECCCC
Confidence            888887764

Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo

>KOG1221 consensus Acyl-CoA reductase [Lipid transport and metabolism]

Probab=98.58  E-value=5.2e-06  Score=74.18  Aligned_cols=182  Identities=19%  Similarity=0.279  Sum_probs=112.8

Q ss_pred             CEEEEECCCChhHHHHHHHHHHc--CC-EEEEEecCchh--HHH---------HHHHHHhhCCC--CceEEEEecCCCHH
Q 025509            1 MDIVITGATSGIGTETARVLALR--GV-HVVMGVRDIAA--GKD---------VKETIVKEIPS--AKVDAMELDLSSLA   64 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~--G~-~Vi~~~r~~~~--~~~---------~~~~~~~~~~~--~~v~~~~~D~~~~~   64 (251)
                      |+++||||+|++|+-+++.|++-  .. ++++.-|..+.  .++         +-+.+.+..|.  .++..+..|+++++
T Consensus        13 k~i~vTG~tGFlgKVliEklLr~~p~v~~IYlLiR~k~g~~~~~Rl~~~~~~~lF~~l~~~~p~~l~Kv~pi~GDi~~~~   92 (467)
T KOG1221|consen   13 KTIFVTGATGFLGKVLIEKLLRTTPDVKRIYLLIRAKKGKAAQERLRTELKDPLFEVLKEKKPEALEKVVPIAGDISEPD   92 (467)
T ss_pred             CeEEEEcccchhHHHHHHHHHhcCcCcceEEEEEecCCCCCHHHHHHHHHhhhHHHHHHhhCccceecceeccccccCcc
Confidence            68999999999999999999974  22 67777664321  111         22223334332  35777888988543


Q ss_pred             ------HHHHHHHHHHhcCCCeeEEEEcCCCCCCCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEE
Q 025509           65 ------SVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIIN  138 (251)
Q Consensus        65 ------~i~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~  138 (251)
                            +.+.+.+       .+|+|||+|+-.. +    .|..+..+.+|+.|+..+++.+......+        .++.
T Consensus        93 LGis~~D~~~l~~-------eV~ivih~AAtvr-F----de~l~~al~iNt~Gt~~~l~lak~~~~l~--------~~vh  152 (467)
T KOG1221|consen   93 LGISESDLRTLAD-------EVNIVIHSAATVR-F----DEPLDVALGINTRGTRNVLQLAKEMVKLK--------ALVH  152 (467)
T ss_pred             cCCChHHHHHHHh-------cCCEEEEeeeeec-c----chhhhhhhhhhhHhHHHHHHHHHHhhhhh--------eEEE
Confidence                  2332222       7899999998533 1    23467789999999999999887776553        7899


Q ss_pred             EcCccccccccCC---ccc--------c---cCCC--------------CCCCCcccccchhHHHHHHHHHHHHHHhccC
Q 025509          139 VSSEGHRLAYHEG---IRF--------D---KIND--------------PSGYNGFRAYSQSKLANILHANELARRLKED  190 (251)
Q Consensus       139 vsS~~~~~~~~~~---~~~--------~---~~~~--------------~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~  190 (251)
                      +|++... -+...   .+|        .   +.+.              ..++|  -.|.-+|+-.+++...-+.     
T Consensus       153 VSTAy~n-~~~~~i~E~~y~~~~~~~~~~~i~~~~~~~~~~ld~~~~~l~~~~P--NTYtfTKal~E~~i~~~~~-----  224 (467)
T KOG1221|consen  153 VSTAYSN-CNVGHIEEKPYPMPETCNPEKILKLDENLSDELLDQKAPKLLGGWP--NTYTFTKALAEMVIQKEAE-----  224 (467)
T ss_pred             eehhhee-cccccccccccCccccCCHHHHHhhhccchHHHHHHhhHHhcCCCC--CceeehHhhHHHHHHhhcc-----
Confidence            9987655 21111   011        0   0000              02222  2677777766654443322     


Q ss_pred             CCcEEEEEeeCCcccCCcccCC
Q 025509          191 GVDITANSVHPGAIATNIIRHN  212 (251)
Q Consensus       191 g~~i~v~~v~Pg~v~t~~~~~~  212 (251)
                      +  +.+..+.|+.|.+..-++.
T Consensus       225 ~--lPivIiRPsiI~st~~EP~  244 (467)
T KOG1221|consen  225 N--LPLVIIRPSIITSTYKEPF  244 (467)
T ss_pred             C--CCeEEEcCCceeccccCCC
Confidence            2  4455599999887766654

>COG4982 3-oxoacyl-[acyl-carrier protein]

Probab=98.54  E-value=9e-06  Score=73.90  Aligned_cols=191  Identities=15%  Similarity=0.082  Sum_probs=120.0

Q ss_pred             CEEEEECCC-ChhHHHHHHHHHHcCCEEEEEecC-chhHHHHHHHHHhhC--CCCceEEEEecCCCHHHHHHHHHHHHhc
Q 025509            1 MDIVITGAT-SGIGTETARVLALRGVHVVMGVRD-IAAGKDVKETIVKEI--PSAKVDAMELDLSSLASVRNFASEYNIQ   76 (251)
Q Consensus         1 k~vlItG~s-~gIG~a~a~~l~~~G~~Vi~~~r~-~~~~~~~~~~~~~~~--~~~~v~~~~~D~~~~~~i~~~~~~~~~~   76 (251)
                      +++||||++ +.||.+++..|++.|++||++..+ .+.-.+..+.+-..+  ++....++..+++++.+++.+++.|...
T Consensus       397 ~valVTGA~~gSIaa~Vv~~LL~gGAtVI~TTS~~s~~r~efyr~LYa~~a~~ga~LwvVpaN~~SysDVdAlIewIg~e  476 (866)
T COG4982         397 KVALVTGASKGSIAAAVVARLLAGGATVIATTSRLSEERTEFYRSLYARHARYGAALWVVPANMGSYSDVDALIEWIGDE  476 (866)
T ss_pred             ceEEEecCCCcchHHHHHHHHHhCCcEEEEEcccccHHHHHHHHHHHHhhCCCCceEEEEeccccchhhHHHHHHHhccc
Confidence            578999999 889999999999999999987654 334455555564433  3667888899999999999999987542


Q ss_pred             C----C----------CeeEEEEcCCCCC--CCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEc
Q 025509           77 H----H----------QLNILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVS  140 (251)
Q Consensus        77 ~----g----------~id~lv~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vs  140 (251)
                      -    |          .+|.++-.|.+.-  .+.+.... -+-.+++-+.+...++-.+.+.-..++-  ...-+||+-.
T Consensus       477 q~~t~g~~s~~~k~a~~ptll~PFAAp~v~G~l~~agsr-aE~~~rilLw~V~Rliggl~~~~s~r~v--~~R~hVVLPg  553 (866)
T COG4982         477 QTETVGPQSIHIKLAWTPTLLFPFAAPRVSGELADAGSR-AEFAMRILLWNVLRLIGGLKKQGSSRGV--DTRLHVVLPG  553 (866)
T ss_pred             cccccCCcceecccccCcceeeecccCCccCccccCCch-HHHHHHHHHHHHHHHHHHhhhhccccCc--ccceEEEecC
Confidence            1    1          3677777776532  22222221 1233444444444444443333222210  0124556666


Q ss_pred             CccccccccCCcccccCCCCCCCCcccccchhHHHHHHHHHHHHHHhc-cCCCcEEEEEeeCCccc-CCcccCC
Q 025509          141 SEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANILHANELARRLK-EDGVDITANSVHPGAIA-TNIIRHN  212 (251)
Q Consensus       141 S~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~-~~g~~i~v~~v~Pg~v~-t~~~~~~  212 (251)
                      |...-                .+.+-..|+-+|++++.+...|..|-. ..-  +.++.-.-|+++ |.++..+
T Consensus       554 SPNrG----------------~FGgDGaYgEsK~aldav~~RW~sEs~Wa~~--vsl~~A~IGWtrGTGLMg~N  609 (866)
T COG4982         554 SPNRG----------------MFGGDGAYGESKLALDAVVNRWHSESSWAAR--VSLAHALIGWTRGTGLMGHN  609 (866)
T ss_pred             CCCCC----------------ccCCCcchhhHHHHHHHHHHHhhccchhhHH--HHHhhhheeeeccccccCCc
Confidence            53211                345667999999999999888877752 222  666666667875 4555443

>COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism]

Probab=98.49  E-value=7.4e-07  Score=78.06  Aligned_cols=76  Identities=28%  Similarity=0.464  Sum_probs=66.0

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcC-CEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCC
Q 025509            1 MDIVITGATSGIGTETARVLALRG-VHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQ   79 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G-~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~   79 (251)
                      |++||.|+ |+||+.+|..|++.| .+|++++|+.++..++....     ..++.++++|+.+.+++.+++++       
T Consensus         2 ~~ilviGa-G~Vg~~va~~la~~~d~~V~iAdRs~~~~~~i~~~~-----~~~v~~~~vD~~d~~al~~li~~-------   68 (389)
T COG1748           2 MKILVIGA-GGVGSVVAHKLAQNGDGEVTIADRSKEKCARIAELI-----GGKVEALQVDAADVDALVALIKD-------   68 (389)
T ss_pred             CcEEEECC-chhHHHHHHHHHhCCCceEEEEeCCHHHHHHHHhhc-----cccceeEEecccChHHHHHHHhc-------
Confidence            57899998 999999999999998 79999999988888776644     34799999999999999988874       


Q ss_pred             eeEEEEcCCC
Q 025509           80 LNILINNAGI   89 (251)
Q Consensus        80 id~lv~~ag~   89 (251)
                      .|+||+++..
T Consensus        69 ~d~VIn~~p~   78 (389)
T COG1748          69 FDLVINAAPP   78 (389)
T ss_pred             CCEEEEeCCc
Confidence            3999999974

>TIGR00521 coaBC_dfp phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic

Probab=98.48  E-value=5.7e-07  Score=79.45  Aligned_cols=74  Identities=20%  Similarity=0.307  Sum_probs=56.8

Q ss_pred             CEEEEECC---------------CCh-hHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHH
Q 025509            1 MDIVITGA---------------TSG-IGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLA   64 (251)
Q Consensus         1 k~vlItG~---------------s~g-IG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~   64 (251)
                      |++|||||               |+| +|.++|++|+.+|++|+++.++....          . ...+  ..+|+++.+
T Consensus       186 ~~vlit~g~t~E~iD~VR~itN~SSG~~g~~~a~~~~~~Ga~V~~~~g~~~~~----------~-~~~~--~~~~v~~~~  252 (390)
T TIGR00521       186 KRVLITAGPTREPIDPVRFISNLSSGKMGLALAEAAYKRGADVTLITGPVSLL----------T-PPGV--KSIKVSTAE  252 (390)
T ss_pred             ceEEEecCCccCCCCceeeecCCCcchHHHHHHHHHHHCCCEEEEeCCCCccC----------C-CCCc--EEEEeccHH
Confidence            57999999               666 99999999999999999988754320          1 2222  557999999


Q ss_pred             HH-HHHHHHHHhcCCCeeEEEEcCCCC
Q 025509           65 SV-RNFASEYNIQHHQLNILINNAGIM   90 (251)
Q Consensus        65 ~i-~~~~~~~~~~~g~id~lv~~ag~~   90 (251)
                      ++ +++++++   ++++|++|+|||+.
T Consensus       253 ~~~~~~~~~~---~~~~D~~i~~Aavs  276 (390)
T TIGR00521       253 EMLEAALNEL---AKDFDIFISAAAVA  276 (390)
T ss_pred             HHHHHHHHhh---cccCCEEEEccccc
Confidence            98 5565443   46799999999975

This model represents a bifunctional enzyme that catalyzes the second and third steps (cysteine ligation, EC 6.3.2.5, and decarboxylation, EC 4.1.1.36) in the biosynthesis of coenzyme A (CoA) from pantothenate in bacteria. In early descriptions of this flavoprotein, a ts mutation in one region of the protein appeared to cause a defect in DNA metaobolism rather than an increased need for the pantothenate precursor beta-alanine. This protein was then called dfp, for DNA/pantothenate metabolism flavoprotein. The authors responsible for detecting phosphopantothenate--cysteine ligase activity suggest renaming this bifunctional protein coaBC for its role in CoA biosynthesis. This enzyme contains the FMN cofactor, but no FAD or pyruvoyl group. The amino-terminal region contains the phosphopantothenoylcysteine decarboxylase activity.

>COG0702 Predicted nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=98.47  E-value=5e-06  Score=69.70  Aligned_cols=73  Identities=29%  Similarity=0.327  Sum_probs=63.4

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      +.+|||||+|.+|.+++++|.++|++|.+..|+.+++....         ..+.+...|+.+++++...++       ++
T Consensus         1 ~~ilV~GatG~~G~~~~~~L~~~~~~v~~~~r~~~~~~~~~---------~~v~~~~~d~~~~~~l~~a~~-------G~   64 (275)
T COG0702           1 MKILVTGATGFVGGAVVRELLARGHEVRAAVRNPEAAAALA---------GGVEVVLGDLRDPKSLVAGAK-------GV   64 (275)
T ss_pred             CeEEEEecccchHHHHHHHHHhCCCEEEEEEeCHHHHHhhc---------CCcEEEEeccCCHhHHHHHhc-------cc
Confidence            57999999999999999999999999999999988766543         468899999999999988776       67


Q ss_pred             eEEEEcCCC
Q 025509           81 NILINNAGI   89 (251)
Q Consensus        81 d~lv~~ag~   89 (251)
                      |.+++..+.
T Consensus        65 ~~~~~i~~~   73 (275)
T COG0702          65 DGVLLISGL   73 (275)
T ss_pred             cEEEEEecc
Confidence            888888774

>KOG1431 consensus GDP-L-fucose synthetase [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones]

Probab=98.43  E-value=3.6e-06  Score=67.66  Aligned_cols=166  Identities=15%  Similarity=0.052  Sum_probs=105.3

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCC---EEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcC
Q 025509            1 MDIVITGATSGIGTETARVLALRGV---HVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQH   77 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~---~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~   77 (251)
                      |+|||||++|=+|+|+.+.+.++|+   +.++.+..                       .+|+++.++.+.+++..    
T Consensus         2 ~kIlVtGg~GLVGsAi~~vv~~q~~~~e~wvf~~sk-----------------------d~DLt~~a~t~~lF~~e----   54 (315)
T KOG1431|consen    2 KKILVTGGTGLVGSAIVKVVQEQGFDDENWVFIGSK-----------------------DADLTNLADTRALFESE----   54 (315)
T ss_pred             ceEEEecCCchHHHHHHHHHHhcCCCCcceEEeccc-----------------------cccccchHHHHHHHhcc----
Confidence            5799999999999999999999876   44444432                       16999999999999875    


Q ss_pred             CCeeEEEEcCCCCCC-CCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCc-ccc
Q 025509           78 HQLNILINNAGIMGT-PFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGI-RFD  155 (251)
Q Consensus        78 g~id~lv~~ag~~~~-~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~-~~~  155 (251)
                       ++..|||.|+..+. +...+  --.+++..|+.=.-++++.+..+-.+         ++++..|..-.--...+. +=.
T Consensus        55 -kPthVIhlAAmVGGlf~N~~--ynldF~r~Nl~indNVlhsa~e~gv~---------K~vsclStCIfPdkt~yPIdEt  122 (315)
T KOG1431|consen   55 -KPTHVIHLAAMVGGLFHNNT--YNLDFIRKNLQINDNVLHSAHEHGVK---------KVVSCLSTCIFPDKTSYPIDET  122 (315)
T ss_pred             -CCceeeehHhhhcchhhcCC--CchHHHhhcceechhHHHHHHHhchh---------hhhhhcceeecCCCCCCCCCHH
Confidence             67788998875433 22221  12344555555555667777777544         466666543221111110 000


Q ss_pred             cCCCCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCccc
Q 025509          156 KINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIR  210 (251)
Q Consensus       156 ~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~  210 (251)
                      -+..-.+.|....|+.+|..+.-..++.+.+++.     ...++.|-.+..|--.
T Consensus       123 mvh~gpphpsN~gYsyAKr~idv~n~aY~~qhg~-----~~tsviPtNvfGphDN  172 (315)
T KOG1431|consen  123 MVHNGPPHPSNFGYSYAKRMIDVQNQAYRQQHGR-----DYTSVIPTNVFGPHDN  172 (315)
T ss_pred             HhccCCCCCCchHHHHHHHHHHHHHHHHHHHhCC-----ceeeeccccccCCCCC
Confidence            1111135567778999998887777777777764     3445677777666543

>COG2910 Putative NADH-flavin reductase [General function prediction only]

Probab=98.36  E-value=3.2e-05  Score=60.35  Aligned_cols=161  Identities=20%  Similarity=0.201  Sum_probs=100.7

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      |.+.|.|+||-+|+.++++..++|+.|..+.||+.+....          ..+.+++.|+.+++++.+.+.       +.
T Consensus         1 mKIaiIgAsG~~Gs~i~~EA~~RGHeVTAivRn~~K~~~~----------~~~~i~q~Difd~~~~a~~l~-------g~   63 (211)
T COG2910           1 MKIAIIGASGKAGSRILKEALKRGHEVTAIVRNASKLAAR----------QGVTILQKDIFDLTSLASDLA-------GH   63 (211)
T ss_pred             CeEEEEecCchhHHHHHHHHHhCCCeeEEEEeChHhcccc----------ccceeecccccChhhhHhhhc-------CC
Confidence            5789999999999999999999999999999998774331          357788999999999865444       78


Q ss_pred             eEEEEcCCCCCCCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccccCCCC
Q 025509           81 NILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDP  160 (251)
Q Consensus        81 d~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~  160 (251)
                      |+||..-|...+-     . .+...    ..    .+.+...++..     ...|++.++..++..-.++ ...-|  . 
T Consensus        64 DaVIsA~~~~~~~-----~-~~~~~----k~----~~~li~~l~~a-----gv~RllVVGGAGSL~id~g-~rLvD--~-  120 (211)
T COG2910          64 DAVISAFGAGASD-----N-DELHS----KS----IEALIEALKGA-----GVPRLLVVGGAGSLEIDEG-TRLVD--T-  120 (211)
T ss_pred             ceEEEeccCCCCC-----h-hHHHH----HH----HHHHHHHHhhc-----CCeeEEEEcCccceEEcCC-ceeec--C-
Confidence            9999998864321     1 11111    11    34445555543     4579999998776654333 11111  0 


Q ss_pred             CCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCc
Q 025509          161 SGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNI  208 (251)
Q Consensus       161 ~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~  208 (251)
                       |..+ ..|-..-.+.--+...|..+-.     +.-.-|+|...-.|.
T Consensus       121 -p~fP-~ey~~~A~~~ae~L~~Lr~~~~-----l~WTfvSPaa~f~PG  161 (211)
T COG2910         121 -PDFP-AEYKPEALAQAEFLDSLRAEKS-----LDWTFVSPAAFFEPG  161 (211)
T ss_pred             -CCCc-hhHHHHHHHHHHHHHHHhhccC-----cceEEeCcHHhcCCc
Confidence             1111 1343332232233344444432     445558998776663

>PLN00106 malate dehydrogenase

Probab=98.33  E-value=4.7e-06  Score=71.89  Aligned_cols=158  Identities=12%  Similarity=0.082  Sum_probs=94.2

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCC--EEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCC
Q 025509            1 MDIVITGATSGIGTETARVLALRGV--HVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHH   78 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~--~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g   78 (251)
                      ++|.|||++|.+|.+++..|+..+.  .++++++++  ++....++.+..+  ..  ...++++.+++.+.+       .
T Consensus        19 ~KV~IiGaaG~VG~~~a~~l~~~~~~~el~L~Di~~--~~g~a~Dl~~~~~--~~--~i~~~~~~~d~~~~l-------~   85 (323)
T PLN00106         19 FKVAVLGAAGGIGQPLSLLMKMNPLVSELHLYDIAN--TPGVAADVSHINT--PA--QVRGFLGDDQLGDAL-------K   85 (323)
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCCCEEEEEecCC--CCeeEchhhhCCc--Cc--eEEEEeCCCCHHHHc-------C
Confidence            3699999999999999999997764  799999977  2221223332211  11  222433333333322       3


Q ss_pred             CeeEEEEcCCCCCCCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccc----cccccCCccc
Q 025509           79 QLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGH----RLAYHEGIRF  154 (251)
Q Consensus        79 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~----~~~~~~~~~~  154 (251)
                      ..|+||+.||....+    -+.+++.+..|+.....+.+.+.++-        +.+.++++|...-    ...      +
T Consensus        86 ~aDiVVitAG~~~~~----g~~R~dll~~N~~i~~~i~~~i~~~~--------p~aivivvSNPvD~~~~i~t------~  147 (323)
T PLN00106         86 GADLVIIPAGVPRKP----GMTRDDLFNINAGIVKTLCEAVAKHC--------PNALVNIISNPVNSTVPIAA------E  147 (323)
T ss_pred             CCCEEEEeCCCCCCC----CCCHHHHHHHHHHHHHHHHHHHHHHC--------CCeEEEEeCCCccccHHHHH------H
Confidence            799999999975432    23467778888777555555444442        2344444443221    110      0


Q ss_pred             ccCCCCCCCCcccccchhHHHHHHHHHHHHHHhccC
Q 025509          155 DKINDPSGYNGFRAYSQSKLANILHANELARRLKED  190 (251)
Q Consensus       155 ~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~  190 (251)
                       .+....+.+....|+.++.--..|...+|.++.-.
T Consensus       148 -~~~~~s~~p~~~viG~~~LDs~Rl~~~lA~~lgv~  182 (323)
T PLN00106        148 -VLKKAGVYDPKKLFGVTTLDVVRANTFVAEKKGLD  182 (323)
T ss_pred             -HHHHcCCCCcceEEEEecchHHHHHHHHHHHhCCC
Confidence             01122356666789998866667888888887644

>PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase

Probab=98.30  E-value=3.5e-06  Score=74.80  Aligned_cols=76  Identities=28%  Similarity=0.486  Sum_probs=59.7

Q ss_pred             EEEECCCChhHHHHHHHHHHcC-C-EEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            3 IVITGATSGIGTETARVLALRG-V-HVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         3 vlItG~s~gIG~a~a~~l~~~G-~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      |+|.|| |.+|+++++.|++.+ + +|++.+|+.+++++..+++    ....+.++++|+.|.+++.++++       +.
T Consensus         1 IlvlG~-G~vG~~~~~~L~~~~~~~~v~va~r~~~~~~~~~~~~----~~~~~~~~~~d~~~~~~l~~~~~-------~~   68 (386)
T PF03435_consen    1 ILVLGA-GRVGSAIARLLARRGPFEEVTVADRNPEKAERLAEKL----LGDRVEAVQVDVNDPESLAELLR-------GC   68 (386)
T ss_dssp             EEEE---SHHHHHHHHHHHCTTCE-EEEEEESSHHHHHHHHT------TTTTEEEEE--TTTHHHHHHHHT-------TS
T ss_pred             CEEEcC-cHHHHHHHHHHhcCCCCCcEEEEECCHHHHHHHHhhc----cccceeEEEEecCCHHHHHHHHh-------cC
Confidence            789999 999999999999886 4 8999999999988877654    25689999999999999888776       45


Q ss_pred             eEEEEcCCCC
Q 025509           81 NILINNAGIM   90 (251)
Q Consensus        81 d~lv~~ag~~   90 (251)
                      |+|||++|.+
T Consensus        69 dvVin~~gp~   78 (386)
T PF03435_consen   69 DVVINCAGPF   78 (386)
T ss_dssp             SEEEE-SSGG
T ss_pred             CEEEECCccc
Confidence            9999999853

Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A.

>KOG1203 consensus Predicted dehydrogenase [Carbohydrate transport and metabolism]

Probab=98.28  E-value=1.1e-05  Score=71.09  Aligned_cols=126  Identities=20%  Similarity=0.224  Sum_probs=80.8

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHH-HHHHHHHHhcCCC
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASV-RNFASEYNIQHHQ   79 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i-~~~~~~~~~~~g~   79 (251)
                      ++|+|+||+|++|+-+++.|.+.|+.|....|+.++.++... +...  ......+..|.....++ ..+++.+   -..
T Consensus        80 ~~VlVvGatG~vG~~iv~~llkrgf~vra~VRd~~~a~~~~~-~~~~--d~~~~~v~~~~~~~~d~~~~~~~~~---~~~  153 (411)
T KOG1203|consen   80 TTVLVVGATGKVGRRIVKILLKRGFSVRALVRDEQKAEDLLG-VFFV--DLGLQNVEADVVTAIDILKKLVEAV---PKG  153 (411)
T ss_pred             CeEEEecCCCchhHHHHHHHHHCCCeeeeeccChhhhhhhhc-cccc--ccccceeeeccccccchhhhhhhhc---ccc
Confidence            369999999999999999999999999999999888777655 1111  12334444444443333 3333222   113


Q ss_pred             eeEEEEcCCCCCCCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccc
Q 025509           80 LNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRL  146 (251)
Q Consensus        80 id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~  146 (251)
                      ..+++.++|..+...     |...-.++.+.|+.+++.++....         -.+++++||+.+..
T Consensus       154 ~~~v~~~~ggrp~~e-----d~~~p~~VD~~g~knlvdA~~~aG---------vk~~vlv~si~~~~  206 (411)
T KOG1203|consen  154 VVIVIKGAGGRPEEE-----DIVTPEKVDYEGTKNLVDACKKAG---------VKRVVLVGSIGGTK  206 (411)
T ss_pred             ceeEEecccCCCCcc-----cCCCcceecHHHHHHHHHHHHHhC---------CceEEEEEeecCcc
Confidence            556777776433221     233334567778888888874443         34899999876543

>KOG2733 consensus Uncharacterized membrane protein [Function unknown]

Probab=98.27  E-value=3.9e-06  Score=71.60  Aligned_cols=80  Identities=21%  Similarity=0.266  Sum_probs=69.3

Q ss_pred             EEEECCCChhHHHHHHHHHH----cCCEEEEEecCchhHHHHHHHHHhhCC---CCceEEEEecCCCHHHHHHHHHHHHh
Q 025509            3 IVITGATSGIGTETARVLAL----RGVHVVMGVRDIAAGKDVKETIVKEIP---SAKVDAMELDLSSLASVRNFASEYNI   75 (251)
Q Consensus         3 vlItG~s~gIG~a~a~~l~~----~G~~Vi~~~r~~~~~~~~~~~~~~~~~---~~~v~~~~~D~~~~~~i~~~~~~~~~   75 (251)
                      ++|.||||.-|.-+++++..    .|..+.+.+||++++++..+.+.+..+   +..+ ++.+|.+|++++.+++++   
T Consensus         8 vVIyGASGfTG~yivee~v~~~~~~~~slavAGRn~~KL~~vL~~~~~k~~~~ls~~~-i~i~D~~n~~Sl~emak~---   83 (423)
T KOG2733|consen    8 VVIYGASGFTGKYIVEEAVSSQVFEGLSLAVAGRNEKKLQEVLEKVGEKTGTDLSSSV-ILIADSANEASLDEMAKQ---   83 (423)
T ss_pred             EEEEccccccceeeHHHHhhhhcccCceEEEecCCHHHHHHHHHHHhhccCCCcccce-EEEecCCCHHHHHHHHhh---
Confidence            78999999999999999998    678899999999999999998877653   2334 888999999999999985   


Q ss_pred             cCCCeeEEEEcCCCC
Q 025509           76 QHHQLNILINNAGIM   90 (251)
Q Consensus        76 ~~g~id~lv~~ag~~   90 (251)
                          ..+|+||+|..
T Consensus        84 ----~~vivN~vGPy   94 (423)
T KOG2733|consen   84 ----ARVIVNCVGPY   94 (423)
T ss_pred             ----hEEEEeccccc
Confidence                46999999954

>KOG1372 consensus GDP-mannose 4,6 dehydratase [Carbohydrate transport and metabolism]

Probab=98.21  E-value=3.5e-06  Score=68.57  Aligned_cols=182  Identities=16%  Similarity=0.125  Sum_probs=111.1

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCC----CCceEEEEecCCCHHHHHHHHHHHHhc
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIP----SAKVDAMELDLSSLASVRNFASEYNIQ   76 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~----~~~v~~~~~D~~~~~~i~~~~~~~~~~   76 (251)
                      |++||||-+|-=|+.+|+.|+.+|+.|..+-|.........-+..-..|    ++.....-.|++|...+.+++..+   
T Consensus        29 kvALITGItGQDGSYLaEfLL~KgYeVHGiiRRsSsFNT~RIeHlY~nP~~h~~~~mkLHYgDmTDss~L~k~I~~i---  105 (376)
T KOG1372|consen   29 KVALITGITGQDGSYLAEFLLSKGYEVHGIIRRSSSFNTARIEHLYSNPHTHNGASMKLHYGDMTDSSCLIKLISTI---  105 (376)
T ss_pred             eEEEEecccCCCchHHHHHHHhCCceeeEEEeeccccchhhhhhhhcCchhcccceeEEeeccccchHHHHHHHhcc---
Confidence            5799999999999999999999999998766654443333222221112    456788889999999999999987   


Q ss_pred             CCCeeEEEEcCCCCCCCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCccccc
Q 025509           77 HHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDK  156 (251)
Q Consensus        77 ~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~  156 (251)
                        .++-+.|-|+-..  ...+.+-.+-.-++...|++.++.+..-+-...      +-|+-.-|+. -.++..-..+   
T Consensus       106 --kPtEiYnLaAQSH--VkvSFdlpeYTAeVdavGtLRlLdAi~~c~l~~------~VrfYQAstS-ElyGkv~e~P---  171 (376)
T KOG1372|consen  106 --KPTEVYNLAAQSH--VKVSFDLPEYTAEVDAVGTLRLLDAIRACRLTE------KVRFYQASTS-ELYGKVQEIP---  171 (376)
T ss_pred             --Cchhhhhhhhhcc--eEEEeecccceeeccchhhhhHHHHHHhcCccc------ceeEEecccH-hhcccccCCC---
Confidence              5666777766432  223333344456677888888888776664332      3455544442 2222111111   


Q ss_pred             CCCCCCCCcccccchhHHHHHHHHHHHHHHhc---cCCCcEEEEEeeC
Q 025509          157 INDPSGYNGFRAYSQSKLANILHANELARRLK---EDGVDITANSVHP  201 (251)
Q Consensus       157 ~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~---~~g~~i~v~~v~P  201 (251)
                      -.+..|+.+.++|+++|..-.=++-..+..+.   -.|  |-+|+=+|
T Consensus       172 QsE~TPFyPRSPYa~aKmy~~WivvNyREAYnmfAcNG--ILFNHESP  217 (376)
T KOG1372|consen  172 QSETTPFYPRSPYAAAKMYGYWIVVNYREAYNMFACNG--ILFNHESP  217 (376)
T ss_pred             cccCCCCCCCChhHHhhhhheEEEEEhHHhhcceeecc--EeecCCCC
Confidence            11233566778999999763222222233322   234  66665555

>PTZ00325 malate dehydrogenase; Provisional

Probab=98.15  E-value=5.9e-05  Score=65.08  Aligned_cols=157  Identities=13%  Similarity=0.071  Sum_probs=90.1

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcC--CEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCC
Q 025509            1 MDIVITGATSGIGTETARVLALRG--VHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHH   78 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G--~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g   78 (251)
                      ++|.|||++|.||.+++..|+..+  ..+++++++  .+.....++.+..  ..  ....+.+++.+..+.+       .
T Consensus         9 ~KI~IiGaaG~VGs~~a~~l~~~~~~~elvL~Di~--~~~g~a~Dl~~~~--~~--~~v~~~td~~~~~~~l-------~   75 (321)
T PTZ00325          9 FKVAVLGAAGGIGQPLSLLLKQNPHVSELSLYDIV--GAPGVAADLSHID--TP--AKVTGYADGELWEKAL-------R   75 (321)
T ss_pred             CEEEEECCCCHHHHHHHHHHhcCCCCCEEEEEecC--CCcccccchhhcC--cC--ceEEEecCCCchHHHh-------C
Confidence            368999999999999999999665  479999993  2222222333322  12  2233555433322222       2


Q ss_pred             CeeEEEEcCCCCCCCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccc-cccCCcccccC
Q 025509           79 QLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRL-AYHEGIRFDKI  157 (251)
Q Consensus        79 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~-~~~~~~~~~~~  157 (251)
                      ..|+||+++|....+    .+.+.+.+..|+.....+++++.++         +.-++|+++|-.... ....   ....
T Consensus        76 gaDvVVitaG~~~~~----~~tR~dll~~N~~i~~~i~~~i~~~---------~~~~iviv~SNPvdv~~~~~---~~~~  139 (321)
T PTZ00325         76 GADLVLICAGVPRKP----GMTRDDLFNTNAPIVRDLVAAVASS---------APKAIVGIVSNPVNSTVPIA---AETL  139 (321)
T ss_pred             CCCEEEECCCCCCCC----CCCHHHHHHHHHHHHHHHHHHHHHH---------CCCeEEEEecCcHHHHHHHH---Hhhh
Confidence            789999999974322    2346777888887766655555444         233677777633211 1000   0001


Q ss_pred             CCCCCCCcccccchhHHHHH--HHHHHHHHHhc
Q 025509          158 NDPSGYNGFRAYSQSKLANI--LHANELARRLK  188 (251)
Q Consensus       158 ~~~~~~~~~~~Y~~sK~a~~--~~~~~la~e~~  188 (251)
                      ....++|....|+.+-  ++  -|-..++..+.
T Consensus       140 ~~~sg~p~~~viG~g~--LDs~R~r~~la~~l~  170 (321)
T PTZ00325        140 KKAGVYDPRKLFGVTT--LDVVRARKFVAEALG  170 (321)
T ss_pred             hhccCCChhheeechh--HHHHHHHHHHHHHhC
Confidence            1234566677888872  54  34455555554

>PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases

Probab=98.08  E-value=3.2e-05  Score=58.33  Aligned_cols=74  Identities=20%  Similarity=0.292  Sum_probs=54.9

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCC-EEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCC
Q 025509            1 MDIVITGATSGIGTETARVLALRGV-HVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQ   79 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~   79 (251)
                      ++++|.|+ ||.|++++..|++.|+ +|.++.|+.++++++.+.+    ++..+.++.  +.+..   +...       .
T Consensus        13 ~~vlviGa-Gg~ar~v~~~L~~~g~~~i~i~nRt~~ra~~l~~~~----~~~~~~~~~--~~~~~---~~~~-------~   75 (135)
T PF01488_consen   13 KRVLVIGA-GGAARAVAAALAALGAKEITIVNRTPERAEALAEEF----GGVNIEAIP--LEDLE---EALQ-------E   75 (135)
T ss_dssp             SEEEEESS-SHHHHHHHHHHHHTTSSEEEEEESSHHHHHHHHHHH----TGCSEEEEE--GGGHC---HHHH-------T
T ss_pred             CEEEEECC-HHHHHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHc----Cccccceee--HHHHH---HHHh-------h
Confidence            57999997 8999999999999998 4999999999998888877    233455554  32222   2222       7


Q ss_pred             eeEEEEcCCCCC
Q 025509           80 LNILINNAGIMG   91 (251)
Q Consensus        80 id~lv~~ag~~~   91 (251)
                      .|++|++.+...
T Consensus        76 ~DivI~aT~~~~   87 (135)
T PF01488_consen   76 ADIVINATPSGM   87 (135)
T ss_dssp             ESEEEE-SSTTS
T ss_pred             CCeEEEecCCCC
Confidence            899999998643

Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C ....

>PF00056 Ldh_1_N: lactate/malate dehydrogenase, NAD binding domain Prosite entry for lactate dehydrogenase Prosite entry for malate dehydrogenase; InterPro: IPR001236 L-lactate dehydrogenases are metabolic enzymes which catalyse the conversion of L-lactate to pyruvate, the last step in anaerobic glycolysis []

Probab=98.07  E-value=0.00022  Score=54.16  Aligned_cols=115  Identities=17%  Similarity=0.230  Sum_probs=76.6

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCC--EEEEEecCchhHHHHHHHHHhhCCC--CceEEEEecCCCHHHHHHHHHHHHhc
Q 025509            1 MDIVITGATSGIGTETARVLALRGV--HVVMGVRDIAAGKDVKETIVKEIPS--AKVDAMELDLSSLASVRNFASEYNIQ   76 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~--~Vi~~~r~~~~~~~~~~~~~~~~~~--~~v~~~~~D~~~~~~i~~~~~~~~~~   76 (251)
                      ++|.|+|++|.+|.++|..|...+.  ++++.++++++++....++......  ....+..   .+++++          
T Consensus         1 ~KV~IiGa~G~VG~~~a~~l~~~~l~~ei~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~i~~---~~~~~~----------   67 (141)
T PF00056_consen    1 MKVAIIGAAGNVGSTLALLLAQQGLADEIVLIDINEDKAEGEALDLSHASAPLPSPVRITS---GDYEAL----------   67 (141)
T ss_dssp             SEEEEESTTSHHHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHHHHHGSTEEEEEEE---SSGGGG----------
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCCCceEEeccCcccceeeehhhhhhhhhccccccccc---cccccc----------
Confidence            4789999999999999999999875  7999999988888777777653221  2222222   332222          


Q ss_pred             CCCeeEEEEcCCCCCCCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcC
Q 025509           77 HHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSS  141 (251)
Q Consensus        77 ~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS  141 (251)
                       ...|++|..||....+.    ++-.+.++.|.    .+++...+.+.+.    ++.+.++.++.
T Consensus        68 -~~aDivvitag~~~~~g----~sR~~ll~~N~----~i~~~~~~~i~~~----~p~~~vivvtN  119 (141)
T PF00056_consen   68 -KDADIVVITAGVPRKPG----MSRLDLLEANA----KIVKEIAKKIAKY----APDAIVIVVTN  119 (141)
T ss_dssp             -TTESEEEETTSTSSSTT----SSHHHHHHHHH----HHHHHHHHHHHHH----STTSEEEE-SS
T ss_pred             -ccccEEEEecccccccc----ccHHHHHHHhH----hHHHHHHHHHHHh----CCccEEEEeCC
Confidence             37999999999754322    12344455554    4455666666655    24678888875

L-lactate dehydrogenase is also found as a lens crystallin in bird and crocodile eyes. L-2-hydroxyisocaproate dehydrogenases are also members of the family. Malate dehydrogenases catalyse the interconversion of malate to oxaloacetate []. The enzyme participates in the citric acid cycle. This entry represents the N-terminal, and is thought to be a Rossmann NAD-binding fold.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1IB6_B 3HHP_C 1IE3_A 2PWZ_A 1EMD_A 2CMD_A 1EZ4_D 9LDT_B 9LDB_B 2D4A_C ....

>PRK09620 hypothetical protein; Provisional

Probab=97.98  E-value=9.5e-06  Score=66.70  Aligned_cols=78  Identities=18%  Similarity=0.216  Sum_probs=47.9

Q ss_pred             CEEEEECCC----------------ChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCC-CCceEEEEecCCCH
Q 025509            1 MDIVITGAT----------------SGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIP-SAKVDAMELDLSSL   63 (251)
Q Consensus         1 k~vlItG~s----------------~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~-~~~v~~~~~D~~~~   63 (251)
                      |+||||+|.                |.+|+++|++|+++|++|+++++.......       ..+ +..+..+..    .
T Consensus         4 k~vlITaG~T~E~iD~VR~itN~SSGfiGs~LA~~L~~~Ga~V~li~g~~~~~~~-------~~~~~~~~~~V~s----~   72 (229)
T PRK09620          4 KKVLITSGGCLEKWDQVRGHTNMAKGTIGRIIAEELISKGAHVIYLHGYFAEKPN-------DINNQLELHPFEG----I   72 (229)
T ss_pred             CEEEEeCCCccCCcCCeeEecCCCcCHHHHHHHHHHHHCCCeEEEEeCCCcCCCc-------ccCCceeEEEEec----H
Confidence            679999886                999999999999999999988763211000       000 112223333    2


Q ss_pred             HHHHHHHHHHHhcCCCeeEEEEcCCCC
Q 025509           64 ASVRNFASEYNIQHHQLNILINNAGIM   90 (251)
Q Consensus        64 ~~i~~~~~~~~~~~g~id~lv~~ag~~   90 (251)
                      .++...+.++... .++|++||+|+..
T Consensus        73 ~d~~~~l~~~~~~-~~~D~VIH~AAvs   98 (229)
T PRK09620         73 IDLQDKMKSIITH-EKVDAVIMAAAGS   98 (229)
T ss_pred             HHHHHHHHHHhcc-cCCCEEEECcccc
Confidence            2222233333222 2689999999974

>KOG2865 consensus NADH:ubiquinone oxidoreductase, NDUFA9/39kDa subunit [Energy production and conversion]

Probab=97.98  E-value=7.2e-05  Score=62.37  Aligned_cols=119  Identities=23%  Similarity=0.145  Sum_probs=85.1

Q ss_pred             EEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCee
Q 025509            2 DIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQLN   81 (251)
Q Consensus         2 ~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~id   81 (251)
                      ++-|.||+|.+|+-++..|++.|..|++=.|-.+.-....+-+-+   =+++.++..|+.|+++|.++++.       -+
T Consensus        63 VaTVFGAtGFlGryvvnklak~GSQviiPyR~d~~~~r~lkvmGd---LGQvl~~~fd~~DedSIr~vvk~-------sN  132 (391)
T KOG2865|consen   63 VATVFGATGFLGRYVVNKLAKMGSQVIIPYRGDEYDPRHLKVMGD---LGQVLFMKFDLRDEDSIRAVVKH-------SN  132 (391)
T ss_pred             EEEEecccccccHHHHHHHhhcCCeEEEeccCCccchhheeeccc---ccceeeeccCCCCHHHHHHHHHh-------Cc
Confidence            456789999999999999999999999998865432222221211   24699999999999999998884       47


Q ss_pred             EEEEcCCCCCCCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCcccc
Q 025509           82 ILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHR  145 (251)
Q Consensus        82 ~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~  145 (251)
                      +|||-.|---+....+.      -++|+.+.-.+++.+-....+         |+|.+|+-.+.
T Consensus       133 VVINLIGrd~eTknf~f------~Dvn~~~aerlAricke~GVe---------rfIhvS~Lgan  181 (391)
T KOG2865|consen  133 VVINLIGRDYETKNFSF------EDVNVHIAERLARICKEAGVE---------RFIHVSCLGAN  181 (391)
T ss_pred             EEEEeeccccccCCccc------ccccchHHHHHHHHHHhhChh---------heeehhhcccc
Confidence            99999984222122222      457777777777776655444         79999886644

>cd01336 MDH_cytoplasmic_cytosolic Cytoplasmic and cytosolic Malate dehydrogenases

Probab=97.90  E-value=5.5e-05  Score=65.53  Aligned_cols=117  Identities=12%  Similarity=0.045  Sum_probs=67.5

Q ss_pred             EEEEECCCChhHHHHHHHHHHcC-------CEEEEEecCch--hHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHH
Q 025509            2 DIVITGATSGIGTETARVLALRG-------VHVVMGVRDIA--AGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASE   72 (251)
Q Consensus         2 ~vlItG~s~gIG~a~a~~l~~~G-------~~Vi~~~r~~~--~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~   72 (251)
                      +|+|||++|.+|.+++..|+..+       ..|+++++++.  .++.....+.+..     .....|+....++.     
T Consensus         4 kV~I~GAaG~VG~~la~~L~~~~~~~~~~~~el~L~D~~~~~~~~~g~~~Dl~d~~-----~~~~~~~~~~~~~~-----   73 (325)
T cd01336           4 RVLVTGAAGQIAYSLLPMIAKGDVFGPDQPVILHLLDIPPALKALEGVVMELQDCA-----FPLLKSVVATTDPE-----   73 (325)
T ss_pred             EEEEECCCCHHHHHHHHHHHhCcccCCCCCcEEEEEEcCCccccccceeeehhhcc-----ccccCCceecCCHH-----
Confidence            58999999999999999999844       48999999653  1222111111100     01111332222222     


Q ss_pred             HHhcCCCeeEEEEcCCCCCCCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcC
Q 025509           73 YNIQHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSS  141 (251)
Q Consensus        73 ~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS  141 (251)
                        +.+.+.|+|||+||.....    .++-.+.++.|+.    +++...+.+.+...   +.+.++++|.
T Consensus        74 --~~l~~aDiVI~tAG~~~~~----~~~R~~l~~~N~~----i~~~i~~~i~~~~~---~~~iiivvsN  129 (325)
T cd01336          74 --EAFKDVDVAILVGAMPRKE----GMERKDLLKANVK----IFKEQGEALDKYAK---KNVKVLVVGN  129 (325)
T ss_pred             --HHhCCCCEEEEeCCcCCCC----CCCHHHHHHHHHH----HHHHHHHHHHHhCC---CCeEEEEecC
Confidence              2223799999999975432    1223555666654    44555566655421   3567777775

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are eukaryotic MDHs localized to the cytoplasm and cytosol. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PRK14982 acyl-ACP reductase; Provisional

Probab=97.82  E-value=0.00011  Score=63.60  Aligned_cols=71  Identities=17%  Similarity=0.273  Sum_probs=50.9

Q ss_pred             CEEEEECCCChhHHHHHHHHHHc-C-CEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCC
Q 025509            1 MDIVITGATSGIGTETARVLALR-G-VHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHH   78 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~-G-~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g   78 (251)
                      |+|+||||+|.||+++|+.|+++ | .+++++.|+..++.+..+++..           .|+.   ++.+       ...
T Consensus       156 k~VLVtGAtG~IGs~lar~L~~~~gv~~lilv~R~~~rl~~La~el~~-----------~~i~---~l~~-------~l~  214 (340)
T PRK14982        156 ATVAVVGATGDIGSAVCRWLDAKTGVAELLLVARQQERLQELQAELGG-----------GKIL---SLEE-------ALP  214 (340)
T ss_pred             CEEEEEccChHHHHHHHHHHHhhCCCCEEEEEcCCHHHHHHHHHHhcc-----------ccHH---hHHH-------HHc
Confidence            57999999999999999999864 6 4899999988777766554311           1222   1222       223


Q ss_pred             CeeEEEEcCCCCCC
Q 025509           79 QLNILINNAGIMGT   92 (251)
Q Consensus        79 ~id~lv~~ag~~~~   92 (251)
                      ..|+||++++....
T Consensus       215 ~aDiVv~~ts~~~~  228 (340)
T PRK14982        215 EADIVVWVASMPKG  228 (340)
T ss_pred             cCCEEEECCcCCcC
Confidence            68999999997543

>KOG2774 consensus NAD dependent epimerase [General function prediction only]

Probab=97.80  E-value=3.1e-05  Score=62.77  Aligned_cols=154  Identities=16%  Similarity=0.172  Sum_probs=95.8

Q ss_pred             EEEEECCCChhHHHHHHHHHH-cCC-EEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCC
Q 025509            2 DIVITGATSGIGTETARVLAL-RGV-HVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQ   79 (251)
Q Consensus         2 ~vlItG~s~gIG~a~a~~l~~-~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~   79 (251)
                      +|||||+-|-+|..+|+.|-. -|. +|++.+..... +.+.         ..--++-.|+-|...+++++-.     .+
T Consensus        46 rvLITG~LGQLG~~~A~LLR~~yGs~~VILSDI~KPp-~~V~---------~~GPyIy~DILD~K~L~eIVVn-----~R  110 (366)
T KOG2774|consen   46 RVLITGSLGQLGRGLASLLRYMYGSECVILSDIVKPP-ANVT---------DVGPYIYLDILDQKSLEEIVVN-----KR  110 (366)
T ss_pred             eEEEecchHHHhHHHHHHHHHHhCCccEehhhccCCc-hhhc---------ccCCchhhhhhccccHHHhhcc-----cc
Confidence            589999999999999999864 475 78887654322 1111         1123455788888888776553     48


Q ss_pred             eeEEEEcCCCCCCCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccC--CcccccC
Q 025509           80 LNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHE--GIRFDKI  157 (251)
Q Consensus        80 id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~--~~~~~~~  157 (251)
                      ||-+||-.+...   ...+...-...++|+.|..++++.+.++-          -++..-|.+++......  ..+...+
T Consensus       111 IdWL~HfSALLS---AvGE~NVpLA~~VNI~GvHNil~vAa~~k----------L~iFVPSTIGAFGPtSPRNPTPdltI  177 (366)
T KOG2774|consen  111 IDWLVHFSALLS---AVGETNVPLALQVNIRGVHNILQVAAKHK----------LKVFVPSTIGAFGPTSPRNPTPDLTI  177 (366)
T ss_pred             cceeeeHHHHHH---HhcccCCceeeeecchhhhHHHHHHHHcC----------eeEeecccccccCCCCCCCCCCCeee
Confidence            999999876422   22334455668899999988887776652          23444444443332110  0111111


Q ss_pred             CCCCCCCcccccchhHHHHHHHHHHHHHHhc
Q 025509          158 NDPSGYNGFRAYSQSKLANILHANELARRLK  188 (251)
Q Consensus       158 ~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~  188 (251)
                           ..+...|+.||.-.+.+.+.+--.++
T Consensus       178 -----QRPRTIYGVSKVHAEL~GEy~~hrFg  203 (366)
T KOG2774|consen  178 -----QRPRTIYGVSKVHAELLGEYFNHRFG  203 (366)
T ss_pred             -----ecCceeechhHHHHHHHHHHHHhhcC
Confidence                 12346899999988877766654443

>PRK14106 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=97.80  E-value=8.9e-05  Score=67.12  Aligned_cols=73  Identities=15%  Similarity=0.236  Sum_probs=54.3

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCc-hhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCC
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDI-AAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQ   79 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~-~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~   79 (251)
                      |+++|+|+++ +|.++|+.|++.|++|++++++. ...++..+++.+    ..+.++..|..+         +   ..+.
T Consensus         6 k~v~iiG~g~-~G~~~A~~l~~~G~~V~~~d~~~~~~~~~~~~~l~~----~~~~~~~~~~~~---------~---~~~~   68 (450)
T PRK14106          6 KKVLVVGAGV-SGLALAKFLKKLGAKVILTDEKEEDQLKEALEELGE----LGIELVLGEYPE---------E---FLEG   68 (450)
T ss_pred             CEEEEECCCH-HHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHh----cCCEEEeCCcch---------h---Hhhc
Confidence            5799999888 99999999999999999999975 334333344422    246677778775         1   1247


Q ss_pred             eeEEEEcCCCC
Q 025509           80 LNILINNAGIM   90 (251)
Q Consensus        80 id~lv~~ag~~   90 (251)
                      +|+||+++|+.
T Consensus        69 ~d~vv~~~g~~   79 (450)
T PRK14106         69 VDLVVVSPGVP   79 (450)
T ss_pred             CCEEEECCCCC
Confidence            89999999974

>KOG4039 consensus Serine/threonine kinase TIP30/CC3 [Signal transduction mechanisms]

Probab=97.80  E-value=0.00027  Score=54.92  Aligned_cols=155  Identities=18%  Similarity=0.122  Sum_probs=90.0

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcC-C-EEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCC
Q 025509            1 MDIVITGATSGIGTETARVLALRG-V-HVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHH   78 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G-~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g   78 (251)
                      +.++|.||+|-.|..+.+++++.+ + +|+++.|.+..-..+         ...+.-...|.+..++...   .+    .
T Consensus        19 ~s~fvlGAtG~~G~~llk~~~E~~~FSKV~~i~RR~~~d~at---------~k~v~q~~vDf~Kl~~~a~---~~----q   82 (238)
T KOG4039|consen   19 MSGFVLGATGLCGGGLLKHAQEAPQFSKVYAILRRELPDPAT---------DKVVAQVEVDFSKLSQLAT---NE----Q   82 (238)
T ss_pred             cceEEEeccccccHHHHHHHHhcccceeEEEEEeccCCCccc---------cceeeeEEechHHHHHHHh---hh----c
Confidence            468999999999999999999987 3 799988874221111         2345555667765544433   22    3


Q ss_pred             CeeEEEEcCCCCCCCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccccCC
Q 025509           79 QLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKIN  158 (251)
Q Consensus        79 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~  158 (251)
                      ++|+++++-|-...-.  ..+.+-++-.-.++.       +.+..++     ++...|+++||.++.-            
T Consensus        83 g~dV~FcaLgTTRgka--GadgfykvDhDyvl~-------~A~~AKe-----~Gck~fvLvSS~GAd~------------  136 (238)
T KOG4039|consen   83 GPDVLFCALGTTRGKA--GADGFYKVDHDYVLQ-------LAQAAKE-----KGCKTFVLVSSAGADP------------  136 (238)
T ss_pred             CCceEEEeeccccccc--ccCceEeechHHHHH-------HHHHHHh-----CCCeEEEEEeccCCCc------------
Confidence            7999999988543210  111111111101111       1122222     2456899999976542            


Q ss_pred             CCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCccc
Q 025509          159 DPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIR  210 (251)
Q Consensus       159 ~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~  210 (251)
                           .....|-..|.-++.=.  ....+.      ++..+.||++..+-..
T Consensus       137 -----sSrFlY~k~KGEvE~~v--~eL~F~------~~~i~RPG~ll~~R~e  175 (238)
T KOG4039|consen  137 -----SSRFLYMKMKGEVERDV--IELDFK------HIIILRPGPLLGERTE  175 (238)
T ss_pred             -----ccceeeeeccchhhhhh--hhcccc------EEEEecCcceeccccc
Confidence                 13347888887765322  222222      3444999999665443

>cd05291 HicDH_like L-2-hydroxyisocapronate dehydrogenases and some bacterial L-lactate dehydrogenases

Probab=97.76  E-value=0.00098  Score=57.33  Aligned_cols=116  Identities=16%  Similarity=0.199  Sum_probs=76.6

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcC--CEEEEEecCchhHHHHHHHHHhhCC--CCceEEEEecCCCHHHHHHHHHHHHhc
Q 025509            1 MDIVITGATSGIGTETARVLALRG--VHVVMGVRDIAAGKDVKETIVKEIP--SAKVDAMELDLSSLASVRNFASEYNIQ   76 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G--~~Vi~~~r~~~~~~~~~~~~~~~~~--~~~v~~~~~D~~~~~~i~~~~~~~~~~   76 (251)
                      ++|.|.|+ |++|.++|..|+..|  .+|+++++++++++.....+.+...  .....+..   .+.+.+          
T Consensus         1 ~kI~IIGa-G~vG~~~a~~l~~~g~~~ei~l~D~~~~~~~~~a~dL~~~~~~~~~~~~i~~---~~~~~l----------   66 (306)
T cd05291           1 RKVVIIGA-GHVGSSFAYSLVNQGIADELVLIDINEEKAEGEALDLEDALAFLPSPVKIKA---GDYSDC----------   66 (306)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCcchhhHhHhhHHHHhhccCCCeEEEc---CCHHHh----------
Confidence            46889996 899999999999999  4899999999988888877765432  12222221   222221          


Q ss_pred             CCCeeEEEEcCCCCCCCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCcc
Q 025509           77 HHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEG  143 (251)
Q Consensus        77 ~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~  143 (251)
                       ...|++|+++|....+.    ++-.+.++.|.    .+++...+.+.+.    ++.+.++++|...
T Consensus        67 -~~aDIVIitag~~~~~g----~~R~dll~~N~----~i~~~~~~~i~~~----~~~~~vivvsNP~  120 (306)
T cd05291          67 -KDADIVVITAGAPQKPG----ETRLDLLEKNA----KIMKSIVPKIKAS----GFDGIFLVASNPV  120 (306)
T ss_pred             -CCCCEEEEccCCCCCCC----CCHHHHHHHHH----HHHHHHHHHHHHh----CCCeEEEEecChH
Confidence             37899999999754321    12234455553    4555666666654    3567888888643

L-2-hydroxyisocapronate dehydrogenase (HicDH) catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. This subfamily is composed of HicDHs and some bacterial L-lactate dehydrogenases (LDH). LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Bacterial LDHs can be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. Members of this subfamily with known structures such as the HicDH of Lactobacillus confusus, the non-allosteric LDH of Lactobacillus pentosus, and the allosteric LDH of Bacillus stearothermophilus, show that they exist as homotetramers. The HicDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine

>PRK15116 sulfur acceptor protein CsdL; Provisional

Probab=97.69  E-value=0.0016  Score=54.72  Aligned_cols=79  Identities=22%  Similarity=0.355  Sum_probs=49.1

Q ss_pred             EEEEECCCChhHHHHHHHHHHcCC-EEEEEecCch-------------------hHHHHHHHHHhhCCCCceEEEEecCC
Q 025509            2 DIVITGATSGIGTETARVLALRGV-HVVMGVRDIA-------------------AGKDVKETIVKEIPSAKVDAMELDLS   61 (251)
Q Consensus         2 ~vlItG~s~gIG~a~a~~l~~~G~-~Vi~~~r~~~-------------------~~~~~~~~~~~~~~~~~v~~~~~D~~   61 (251)
                      +|+|.| .||+|.++|+.|++.|. ++.+++.+.-                   +.+-+.+.+.+..|...+..+. +.-
T Consensus        32 ~VlVvG-~GGVGs~vae~Lar~GVg~itLiD~D~V~~sNlnRQ~~~~~~~vG~~Kve~~~~rl~~INP~~~V~~i~-~~i  109 (268)
T PRK15116         32 HICVVG-IGGVGSWAAEALARTGIGAITLIDMDDVCVTNTNRQIHALRDNVGLAKAEVMAERIRQINPECRVTVVD-DFI  109 (268)
T ss_pred             CEEEEC-cCHHHHHHHHHHHHcCCCEEEEEeCCEecccccccccccChhhcChHHHHHHHHHHHhHCCCcEEEEEe-ccc
Confidence            467775 46999999999999995 8888886522                   2334445555555555555553 232


Q ss_pred             CHHHHHHHHHHHHhcCCCeeEEEEcCC
Q 025509           62 SLASVRNFASEYNIQHHQLNILINNAG   88 (251)
Q Consensus        62 ~~~~i~~~~~~~~~~~g~id~lv~~ag   88 (251)
                      +.+.+..++.      ...|+||.+..
T Consensus       110 ~~e~~~~ll~------~~~D~VIdaiD  130 (268)
T PRK15116        110 TPDNVAEYMS------AGFSYVIDAID  130 (268)
T ss_pred             ChhhHHHHhc------CCCCEEEEcCC
Confidence            3444443331      25777777764

>cd00755 YgdL_like Family of activating enzymes (E1) of ubiquitin-like proteins related to the E

Probab=97.65  E-value=0.0022  Score=52.78  Aligned_cols=79  Identities=22%  Similarity=0.311  Sum_probs=53.3

Q ss_pred             EEEEECCCChhHHHHHHHHHHcCC-EEEEEecCc-------------------hhHHHHHHHHHhhCCCCceEEEEecCC
Q 025509            2 DIVITGATSGIGTETARVLALRGV-HVVMGVRDI-------------------AAGKDVKETIVKEIPSAKVDAMELDLS   61 (251)
Q Consensus         2 ~vlItG~s~gIG~a~a~~l~~~G~-~Vi~~~r~~-------------------~~~~~~~~~~~~~~~~~~v~~~~~D~~   61 (251)
                      +|+|.|. ||+|.++++.|++.|. ++++++.+.                   .+.+-+.+.+.+..|..++..+...++
T Consensus        13 ~VlVvG~-GGvGs~va~~Lar~GVg~i~LvD~D~V~~sNlnRq~~~~~~diG~~Kae~~~~~l~~inP~~~V~~~~~~i~   91 (231)
T cd00755          13 HVAVVGL-GGVGSWAAEALARSGVGKLTLIDFDVVCVSNLNRQIHALLSTVGKPKVEVMAERIRDINPECEVDAVEEFLT   91 (231)
T ss_pred             CEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCEECchhhcchhCcChhhCCCcHHHHHHHHHHHHCCCcEEEEeeeecC
Confidence            5777764 6999999999999998 899988653                   244555666666666666666665554


Q ss_pred             CHHHHHHHHHHHHhcCCCeeEEEEcCC
Q 025509           62 SLASVRNFASEYNIQHHQLNILINNAG   88 (251)
Q Consensus        62 ~~~~i~~~~~~~~~~~g~id~lv~~ag   88 (251)
                       .+....++.      ..+|+||.+..
T Consensus        92 -~~~~~~l~~------~~~D~VvdaiD  111 (231)
T cd00755          92 -PDNSEDLLG------GDPDFVVDAID  111 (231)
T ss_pred             -HhHHHHHhc------CCCCEEEEcCC
Confidence             333433331      25788887753

coli hypothetical protein ygdL. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.

>PRK12475 thiamine/molybdopterin biosynthesis MoeB-like protein; Provisional

Probab=97.64  E-value=0.00056  Score=59.61  Aligned_cols=79  Identities=18%  Similarity=0.383  Sum_probs=59.8

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCC-EEEEEecCc---------------------hhHHHHHHHHHhhCCCCceEEEEe
Q 025509            1 MDIVITGATSGIGTETARVLALRGV-HVVMGVRDI---------------------AAGKDVKETIVKEIPSAKVDAMEL   58 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~-~Vi~~~r~~---------------------~~~~~~~~~~~~~~~~~~v~~~~~   58 (251)
                      ++|+|.|+ ||+|.++|+.|++.|. ++.+++++.                     .+++.+.+.+.+..|...+..+..
T Consensus        25 ~~VlIiG~-GglGs~va~~La~aGvg~i~lvD~D~ve~sNL~RQ~l~~~~d~~~g~~Ka~aa~~~l~~inp~v~i~~~~~  103 (338)
T PRK12475         25 KHVLIVGA-GALGAANAEALVRAGIGKLTIADRDYVEWSNLQRQQLYTEEDAKQKKPKAIAAKEHLRKINSEVEIVPVVT  103 (338)
T ss_pred             CcEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCcccccccCccccccHHHccCCccHHHHHHHHHHHHCCCcEEEEEec
Confidence            36899986 7899999999999998 899999873                     355666677777777778888888


Q ss_pred             cCCCHHHHHHHHHHHHhcCCCeeEEEEcCC
Q 025509           59 DLSSLASVRNFASEYNIQHHQLNILINNAG   88 (251)
Q Consensus        59 D~~~~~~i~~~~~~~~~~~g~id~lv~~ag   88 (251)
                      |++ .+.++++++       ..|++|.+..
T Consensus       104 ~~~-~~~~~~~~~-------~~DlVid~~D  125 (338)
T PRK12475        104 DVT-VEELEELVK-------EVDLIIDATD  125 (338)
T ss_pred             cCC-HHHHHHHhc-------CCCEEEEcCC
Confidence            886 344444332       5788888764

>cd08253 zeta_crystallin Zeta-crystallin with NADP-dependent quinone reductase activity (QOR)

Probab=97.63  E-value=0.0016  Score=55.36  Aligned_cols=77  Identities=9%  Similarity=0.221  Sum_probs=52.6

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      ++++|+|+++++|.++++.+...|.+|+++++++++.+.+. ++     +..   ..+|..+.+..+.+.+...  ..++
T Consensus       146 ~~vlI~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~-----g~~---~~~~~~~~~~~~~~~~~~~--~~~~  214 (325)
T cd08253         146 ETVLVHGGSGAVGHAAVQLARWAGARVIATASSAEGAELVR-QA-----GAD---AVFNYRAEDLADRILAATA--GQGV  214 (325)
T ss_pred             CEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-Hc-----CCC---EEEeCCCcCHHHHHHHHcC--CCce
Confidence            46899999999999999999999999999999876544432 11     221   1234555444444333222  2369


Q ss_pred             eEEEEcCC
Q 025509           81 NILINNAG   88 (251)
Q Consensus        81 d~lv~~ag   88 (251)
                      |.+++++|
T Consensus       215 d~vi~~~~  222 (325)
T cd08253         215 DVIIEVLA  222 (325)
T ss_pred             EEEEECCc
Confidence            99999987

Zeta-crystallin is a eye lens protein with NADP-dependent quinone reductase activity (QOR). It has been cited as a structural component in mammalian eyes, but also has homology to quinone reductases in unrelated species. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts

>COG3268 Uncharacterized conserved protein [Function unknown]

Probab=97.60  E-value=0.00017  Score=61.35  Aligned_cols=75  Identities=25%  Similarity=0.361  Sum_probs=61.6

Q ss_pred             EEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCee
Q 025509            2 DIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQLN   81 (251)
Q Consensus         2 ~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~id   81 (251)
                      .++|.||+|..|.-+|++|+++|.+..+.+||..++..+...+     +.+...+.+++  +..++++.+       +.+
T Consensus         8 d~iiYGAtGy~G~lvae~l~~~g~~~aLAgRs~~kl~~l~~~L-----G~~~~~~p~~~--p~~~~~~~~-------~~~   73 (382)
T COG3268           8 DIIIYGATGYAGGLVAEYLAREGLTAALAGRSSAKLDALRASL-----GPEAAVFPLGV--PAALEAMAS-------RTQ   73 (382)
T ss_pred             eEEEEccccchhHHHHHHHHHcCCchhhccCCHHHHHHHHHhc-----CccccccCCCC--HHHHHHHHh-------cce
Confidence            4789999999999999999999999999999999999988877     44455555444  666666555       678


Q ss_pred             EEEEcCCCC
Q 025509           82 ILINNAGIM   90 (251)
Q Consensus        82 ~lv~~ag~~   90 (251)
                      +|+||+|.+
T Consensus        74 VVlncvGPy   82 (382)
T COG3268          74 VVLNCVGPY   82 (382)
T ss_pred             EEEeccccc
Confidence            999999954

>cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase

Probab=97.59  E-value=0.0004  Score=53.29  Aligned_cols=72  Identities=21%  Similarity=0.297  Sum_probs=51.9

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcC-CEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCC
Q 025509            1 MDIVITGATSGIGTETARVLALRG-VHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQ   79 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G-~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~   79 (251)
                      ++++|+|+ |++|.++++.|.+.| .+|.+++|+.++.++..+++....       +..+..+.++.          ...
T Consensus        20 ~~i~iiG~-G~~g~~~a~~l~~~g~~~v~v~~r~~~~~~~~~~~~~~~~-------~~~~~~~~~~~----------~~~   81 (155)
T cd01065          20 KKVLILGA-GGAARAVAYALAELGAAKIVIVNRTLEKAKALAERFGELG-------IAIAYLDLEEL----------LAE   81 (155)
T ss_pred             CEEEEECC-cHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHhhcc-------cceeecchhhc----------ccc
Confidence            46899998 899999999999986 689999999888777666553210       22233443322          237


Q ss_pred             eeEEEEcCCCC
Q 025509           80 LNILINNAGIM   90 (251)
Q Consensus        80 id~lv~~ag~~   90 (251)
                      .|+||++.+..
T Consensus        82 ~Dvvi~~~~~~   92 (155)
T cd01065          82 ADLIINTTPVG   92 (155)
T ss_pred             CCEEEeCcCCC
Confidence            89999999753

Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann

>cd00704 MDH Malate dehydrogenase

Probab=97.58  E-value=0.0011  Score=57.53  Aligned_cols=113  Identities=14%  Similarity=0.097  Sum_probs=68.5

Q ss_pred             EEEEECCCChhHHHHHHHHHHcCC-------EEEEEecCc--hhHHHHHHHHHhhCCCCceEEEEecCCCHHHH-H---H
Q 025509            2 DIVITGATSGIGTETARVLALRGV-------HVVMGVRDI--AAGKDVKETIVKEIPSAKVDAMELDLSSLASV-R---N   68 (251)
Q Consensus         2 ~vlItG~s~gIG~a~a~~l~~~G~-------~Vi~~~r~~--~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i-~---~   68 (251)
                      +|.|||++|.+|.+++..|+..|.       .++++++++  +.++                ....|+++.... .   .
T Consensus         2 KV~IiGAaG~VG~~~a~~L~~~~~~~~~~~~~l~L~Di~~~~~~~~----------------g~~~Dl~d~~~~~~~~~~   65 (323)
T cd00704           2 HVLITGAAGQIGYNLLFLIASGELFGDDQPVILHLLDIPPAMKALE----------------GVVMELQDCAFPLLKGVV   65 (323)
T ss_pred             EEEEECCCcHHHHHHHHHHHhCCccCCCCceEEEEEecCCccCccc----------------eeeeehhhhcccccCCcE
Confidence            589999999999999999998663       499999976  3322                223344332100 0   0


Q ss_pred             HHHHHHhcCCCeeEEEEcCCCCCCCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcC
Q 025509           69 FASEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSS  141 (251)
Q Consensus        69 ~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS  141 (251)
                      +.....+.....|++|+.||....+.    ++-.+.++.|.    .+++.+.+.+.+.++   +.+.++++|-
T Consensus        66 i~~~~~~~~~~aDiVVitAG~~~~~g----~tR~dll~~N~----~i~~~i~~~i~~~~~---~~~iiivvsN  127 (323)
T cd00704          66 ITTDPEEAFKDVDVAILVGAFPRKPG----MERADLLRKNA----KIFKEQGEALNKVAK---PTVKVLVVGN  127 (323)
T ss_pred             EecChHHHhCCCCEEEEeCCCCCCcC----CcHHHHHHHhH----HHHHHHHHHHHHhCC---CCeEEEEeCC
Confidence            00111223347999999999754322    22334455554    456667777766521   3577777764

Malate dehydrogenase (MDH) is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. MDHs belong to the NAD-dependent, lactate dehydrogenase (LDH)-like, 2-hydroxycarboxylate dehydrogenase family, which also includes the GH4 family of glycoside hydrolases. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>TIGR00507 aroE shikimate 5-dehydrogenase

Probab=97.56  E-value=0.00053  Score=57.92  Aligned_cols=72  Identities=19%  Similarity=0.397  Sum_probs=52.1

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      |+++|+|+ ||+|++++..|++.|++|.+++|+.++++++.+.+.+.   ..+.....|     +.         .....
T Consensus       118 k~vliiGa-Gg~g~aia~~L~~~g~~v~v~~R~~~~~~~la~~~~~~---~~~~~~~~~-----~~---------~~~~~  179 (270)
T TIGR00507       118 QRVLIIGA-GGAARAVALPLLKADCNVIIANRTVSKAEELAERFQRY---GEIQAFSMD-----EL---------PLHRV  179 (270)
T ss_pred             CEEEEEcC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhhc---CceEEechh-----hh---------cccCc
Confidence            47899998 69999999999999999999999988888877766432   112222111     10         11368


Q ss_pred             eEEEEcCCCC
Q 025509           81 NILINNAGIM   90 (251)
Q Consensus        81 d~lv~~ag~~   90 (251)
                      |+||++.+..
T Consensus       180 DivInatp~g  189 (270)
T TIGR00507       180 DLIINATSAG  189 (270)
T ss_pred             cEEEECCCCC
Confidence            9999999864

This model finds proteins from prokaryotes and functionally equivalent domains from larger, multifunctional proteins of fungi and plants. Below the trusted cutoff of 180, but above the noise cutoff of 20, are the putative shikimate dehydrogenases of Thermotoga maritima and Mycobacterium tuberculosis, and uncharacterized paralogs of shikimate dehydrogenase from E. coli and H. influenzae. The related enzyme quinate 5-dehydrogenase scores below the noise cutoff. A neighbor-joining tree, constructed with quinate 5-dehydrogenases as the outgroup, shows the Clamydial homolog as clustering among the shikimate dehydrogenases, although the sequence is unusual in the degree of sequence divergence and the presence of an additional N-terminal domain.

>cd08266 Zn_ADH_like1 Alcohol dehydrogenases of the MDR family

Probab=97.54  E-value=0.0023  Score=54.93  Aligned_cols=77  Identities=18%  Similarity=0.315  Sum_probs=54.6

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      ++++|+|+++++|.++++.+...|++|+++++++.+.+.+. .+     +..   ...|..+.+....+.+....  +++
T Consensus       168 ~~vlI~g~~~~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~-~~-----~~~---~~~~~~~~~~~~~~~~~~~~--~~~  236 (342)
T cd08266         168 ETVLVHGAGSGVGSAAIQIAKLFGATVIATAGSEDKLERAK-EL-----GAD---YVIDYRKEDFVREVRELTGK--RGV  236 (342)
T ss_pred             CEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-Hc-----CCC---eEEecCChHHHHHHHHHhCC--CCC
Confidence            36899999999999999999999999999998876554431 11     221   22356665555555444322  369


Q ss_pred             eEEEEcCC
Q 025509           81 NILINNAG   88 (251)
Q Consensus        81 d~lv~~ag   88 (251)
                      |++++++|
T Consensus       237 d~~i~~~g  244 (342)
T cd08266         237 DVVVEHVG  244 (342)
T ss_pred             cEEEECCc
Confidence            99999997

This group contains proteins related to the zinc-dependent alcohol dehydrogenases. However, while the group has structural zinc site characteristic of these enzymes, it lacks the consensus site for a catalytic zinc. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone

>PRK05086 malate dehydrogenase; Provisional

Probab=97.53  E-value=0.00052  Score=59.15  Aligned_cols=104  Identities=16%  Similarity=0.106  Sum_probs=57.4

Q ss_pred             CEEEEECCCChhHHHHHHHHHH-c--CCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEe-cCCCHHHHHHHHHHHHhc
Q 025509            1 MDIVITGATSGIGTETARVLAL-R--GVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMEL-DLSSLASVRNFASEYNIQ   76 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~-~--G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~-D~~~~~~i~~~~~~~~~~   76 (251)
                      |+++|.||+|+||.+++..|.. .  +..+++.+|++. .....-.+.+.   .....+.. +-.+   +.+   .    
T Consensus         1 ~KI~IIGAsG~VG~aia~~l~~~~~~~~el~L~d~~~~-~~g~alDl~~~---~~~~~i~~~~~~d---~~~---~----   66 (312)
T PRK05086          1 MKVAVLGAAGGIGQALALLLKTQLPAGSELSLYDIAPV-TPGVAVDLSHI---PTAVKIKGFSGED---PTP---A----   66 (312)
T ss_pred             CEEEEECCCCHHHHHHHHHHHcCCCCccEEEEEecCCC-CcceehhhhcC---CCCceEEEeCCCC---HHH---H----
Confidence            6799999999999999998855 3  347888888753 21111112111   11111221 1112   111   1    


Q ss_pred             CCCeeEEEEcCCCCCCCCcCCchhhHHHHHHHHHHHHHHHHHHHHH
Q 025509           77 HHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDT  122 (251)
Q Consensus        77 ~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~  122 (251)
                      ....|+||.++|....+.    +.-.+.+..|....-.+++.+.++
T Consensus        67 l~~~DiVIitaG~~~~~~----~~R~dll~~N~~i~~~ii~~i~~~  108 (312)
T PRK05086         67 LEGADVVLISAGVARKPG----MDRSDLFNVNAGIVKNLVEKVAKT  108 (312)
T ss_pred             cCCCCEEEEcCCCCCCCC----CCHHHHHHHHHHHHHHHHHHHHHh
Confidence            136999999999754321    223455677765554444444333

>PRK06849 hypothetical protein; Provisional

Probab=97.52  E-value=0.00094  Score=59.37  Aligned_cols=81  Identities=14%  Similarity=0.093  Sum_probs=54.0

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      |+|||||++.++|.++++.|.+.|++|++++.+..........+      .....+...-.+.+...+.+.++..++ ++
T Consensus         5 ~~VLI~G~~~~~~l~iar~l~~~G~~Vi~~d~~~~~~~~~s~~~------d~~~~~p~p~~d~~~~~~~L~~i~~~~-~i   77 (389)
T PRK06849          5 KTVLITGARAPAALELARLFHNAGHTVILADSLKYPLSRFSRAV------DGFYTIPSPRWDPDAYIQALLSIVQRE-NI   77 (389)
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHhh------hheEEeCCCCCCHHHHHHHHHHHHHHc-CC
Confidence            68999999999999999999999999999998865433221111      112222222334554444444554454 58


Q ss_pred             eEEEEcCC
Q 025509           81 NILINNAG   88 (251)
Q Consensus        81 d~lv~~ag   88 (251)
                      |+||-...
T Consensus        78 d~vIP~~e   85 (389)
T PRK06849         78 DLLIPTCE   85 (389)
T ss_pred             CEEEECCh
Confidence            99998776

>TIGR01758 MDH_euk_cyt malate dehydrogenase, NAD-dependent

Probab=97.48  E-value=0.00099  Score=57.72  Aligned_cols=115  Identities=13%  Similarity=0.115  Sum_probs=71.0

Q ss_pred             EEEEECCCChhHHHHHHHHHHcCC-------EEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHH-HHH-HH--
Q 025509            2 DIVITGATSGIGTETARVLALRGV-------HVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLAS-VRN-FA--   70 (251)
Q Consensus         2 ~vlItG~s~gIG~a~a~~l~~~G~-------~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~-i~~-~~--   70 (251)
                      +|.|+|++|.+|.+++..|+..|.       .++++++++..              ........|+.+... ... ..  
T Consensus         1 ~V~IiGaaG~VG~~~a~~l~~~~~~~~~~e~el~LiD~~~~~--------------~~a~g~~~Dl~d~~~~~~~~~~~~   66 (324)
T TIGR01758         1 RVVVTGAAGQIGYALLPMIARGRMLGKDQPIILHLLDIPPAM--------------KVLEGVVMELMDCAFPLLDGVVPT   66 (324)
T ss_pred             CEEEECCCcHHHHHHHHHHHhccccCCCCccEEEEEecCCcc--------------cccceeEeehhcccchhcCceecc
Confidence            489999999999999999998653       49999986542              112334445554431 100 00  


Q ss_pred             HHHHhcCCCeeEEEEcCCCCCCCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcC
Q 025509           71 SEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSS  141 (251)
Q Consensus        71 ~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS  141 (251)
                      ....+.....|+||+.||....    +.+++.+.++.|+    .+++.+.+.+.+.+   ++.+.++++|.
T Consensus        67 ~~~~~~~~~aDiVVitAG~~~~----~~~tr~~ll~~N~----~i~k~i~~~i~~~~---~~~~iiivvsN  126 (324)
T TIGR01758        67 HDPAVAFTDVDVAILVGAFPRK----EGMERRDLLSKNV----KIFKEQGRALDKLA---KKDCKVLVVGN  126 (324)
T ss_pred             CChHHHhCCCCEEEEcCCCCCC----CCCcHHHHHHHHH----HHHHHHHHHHHhhC---CCCeEEEEeCC
Confidence            0112334579999999997433    1234566677775    45566666666541   13577888775

This model represents the NAD-dependent cytosolic malate dehydrogenase from eukaryotes. The enzyme from pig has been studied by X-ray crystallography

>TIGR00715 precor6x_red precorrin-6x reductase

Probab=97.46  E-value=0.00046  Score=57.69  Aligned_cols=75  Identities=16%  Similarity=0.277  Sum_probs=55.9

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      |+|||+||++- |+.+++.|.+.|++|+...++....+...        ......+..+.-+.+++.+++.+     .++
T Consensus         1 m~ILvlGGT~e-gr~la~~L~~~g~~v~~s~~t~~~~~~~~--------~~g~~~v~~g~l~~~~l~~~l~~-----~~i   66 (256)
T TIGR00715         1 MTVLLMGGTVD-SRAIAKGLIAQGIEILVTVTTSEGKHLYP--------IHQALTVHTGALDPQELREFLKR-----HSI   66 (256)
T ss_pred             CeEEEEechHH-HHHHHHHHHhCCCeEEEEEccCCcccccc--------ccCCceEEECCCCHHHHHHHHHh-----cCC
Confidence            68999999998 99999999999999999988875433321        11123344566677777776664     279


Q ss_pred             eEEEEcCCC
Q 025509           81 NILINNAGI   89 (251)
Q Consensus        81 d~lv~~ag~   89 (251)
                      |+||+.+..
T Consensus        67 ~~VIDAtHP   75 (256)
T TIGR00715        67 DILVDATHP   75 (256)
T ss_pred             CEEEEcCCH
Confidence            999999873

This enzyme was found to be a monomer by gel filtration.

>cd01338 MDH_choloroplast_like Chloroplast-like malate dehydrogenases

Probab=97.44  E-value=0.0036  Score=54.23  Aligned_cols=164  Identities=12%  Similarity=0.026  Sum_probs=97.6

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCC-------EEEEEecCchh--HHHHHHHHHhhC-C-CCceEEEEecCCCHHHHHHH
Q 025509            1 MDIVITGATSGIGTETARVLALRGV-------HVVMGVRDIAA--GKDVKETIVKEI-P-SAKVDAMELDLSSLASVRNF   69 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~-------~Vi~~~r~~~~--~~~~~~~~~~~~-~-~~~v~~~~~D~~~~~~i~~~   69 (251)
                      ++|.|+|++|.+|.++|..|+..|.       .+++++.++..  +......+.... + ...+.+   .-.+++     
T Consensus         3 ~KV~IiGa~G~VG~~~a~~l~~~~~~~~~~~~el~L~Di~~~~~~a~g~a~Dl~~~~~~~~~~~~i---~~~~~~-----   74 (322)
T cd01338           3 VRVAVTGAAGQIGYSLLFRIASGEMFGPDQPVILQLLELPQALKALEGVAMELEDCAFPLLAEIVI---TDDPNV-----   74 (322)
T ss_pred             eEEEEECCCcHHHHHHHHHHHhccccCCCCceEEEEEecCCcccccceeehhhhhccccccCceEE---ecCcHH-----
Confidence            3689999999999999999998875       69999985432  444444443321 1 011111   111211     


Q ss_pred             HHHHHhcCCCeeEEEEcCCCCCCCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCcccccccc
Q 025509           70 ASEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYH  149 (251)
Q Consensus        70 ~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~  149 (251)
                            .....|++|.+||....+. ++   -.+.++.|.    .+++.+.+.+.+.+.   +.+.++++|...=.+.  
T Consensus        75 ------~~~daDivvitaG~~~k~g-~t---R~dll~~N~----~i~~~i~~~i~~~~~---~~~iiivvsNPvD~~t--  135 (322)
T cd01338          75 ------AFKDADWALLVGAKPRGPG-ME---RADLLKANG----KIFTAQGKALNDVAS---RDVKVLVVGNPCNTNA--  135 (322)
T ss_pred             ------HhCCCCEEEEeCCCCCCCC-Cc---HHHHHHHHH----HHHHHHHHHHHhhCC---CCeEEEEecCcHHHHH--
Confidence                  2237899999999754321 22   233455553    556777777766521   2677888775221110  


Q ss_pred             CCcccccCCCCCC-CCcccccchhHHHHHHHHHHHHHHhccCCCcEEE
Q 025509          150 EGIRFDKINDPSG-YNGFRAYSQSKLANILHANELARRLKEDGVDITA  196 (251)
Q Consensus       150 ~~~~~~~~~~~~~-~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v  196 (251)
                          |. +....+ .|....|+.++..-..|...+++.++-.-..|+.
T Consensus       136 ----~~-~~k~sg~~p~~~ViG~t~LDs~Rl~~~la~~lgv~~~~v~~  178 (322)
T cd01338         136 ----LI-AMKNAPDIPPDNFTAMTRLDHNRAKSQLAKKAGVPVTDVKN  178 (322)
T ss_pred             ----HH-HHHHcCCCChHheEEehHHHHHHHHHHHHHHhCcChhHeEE
Confidence                00 011122 6666789999988888888999887654323553

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are bacterial MDHs, and plant MDHs localized to the choloroplasts. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>TIGR02356 adenyl_thiF thiazole biosynthesis adenylyltransferase ThiF, E

Probab=97.44  E-value=0.0015  Score=52.65  Aligned_cols=78  Identities=17%  Similarity=0.300  Sum_probs=56.6

Q ss_pred             EEEEECCCChhHHHHHHHHHHcCC-EEEEEecC-------------------chhHHHHHHHHHhhCCCCceEEEEecCC
Q 025509            2 DIVITGATSGIGTETARVLALRGV-HVVMGVRD-------------------IAAGKDVKETIVKEIPSAKVDAMELDLS   61 (251)
Q Consensus         2 ~vlItG~s~gIG~a~a~~l~~~G~-~Vi~~~r~-------------------~~~~~~~~~~~~~~~~~~~v~~~~~D~~   61 (251)
                      +|+|.| .||+|.++++.|+..|. ++.+++.+                   ..+.+.+.+.+.+..|..++..+..++.
T Consensus        23 ~VlviG-~GglGs~ia~~La~~Gv~~i~lvD~d~ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~v~i~~~~~~i~  101 (202)
T TIGR02356        23 HVLIIG-AGGLGSPAALYLAGAGVGTIVIVDDDHVDLSNLQRQILFTEEDVGRPKVEVAAQRLRELNSDIQVTALKERVT  101 (202)
T ss_pred             CEEEEC-CCHHHHHHHHHHHHcCCCeEEEecCCEEcccchhhhhccChhhCCChHHHHHHHHHHHhCCCCEEEEehhcCC
Confidence            578887 67999999999999998 89999887                   3456666777777776666666665664


Q ss_pred             CHHHHHHHHHHHHhcCCCeeEEEEcCC
Q 025509           62 SLASVRNFASEYNIQHHQLNILINNAG   88 (251)
Q Consensus        62 ~~~~i~~~~~~~~~~~g~id~lv~~ag   88 (251)
                      + +.+.+++       ...|++|.+..
T Consensus       102 ~-~~~~~~~-------~~~D~Vi~~~d  120 (202)
T TIGR02356       102 A-ENLELLI-------NNVDLVLDCTD  120 (202)
T ss_pred             H-HHHHHHH-------hCCCEEEECCC
Confidence            3 3333332       26789888764

coli subfamily. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with the Escherichia. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the more widely distributed clade of ThiF proteins such found in E. coli.

>PF04127 DFP: DNA / pantothenate metabolism flavoprotein; InterPro: IPR007085 This entry represents the C-terminal domain found in DNA/pantothenate metabolism flavoproteins, which affects synthesis of DNA and pantothenate metabolism

Probab=97.43  E-value=0.00083  Score=53.37  Aligned_cols=67  Identities=18%  Similarity=0.173  Sum_probs=41.8

Q ss_pred             CCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCeeEEEEcC
Q 025509            8 ATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQLNILINNA   87 (251)
Q Consensus         8 ~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~id~lv~~a   87 (251)
                      +||-.|.++|++++..|++|+++.... ....          ...+..+  ++.+.+++.+.+.+..   ...|++|++|
T Consensus        27 SSG~~G~~lA~~~~~~Ga~V~li~g~~-~~~~----------p~~~~~i--~v~sa~em~~~~~~~~---~~~Di~I~aA   90 (185)
T PF04127_consen   27 SSGKMGAALAEEAARRGAEVTLIHGPS-SLPP----------PPGVKVI--RVESAEEMLEAVKELL---PSADIIIMAA   90 (185)
T ss_dssp             --SHHHHHHHHHHHHTT-EEEEEE-TT-S--------------TTEEEE--E-SSHHHHHHHHHHHG---GGGSEEEE-S
T ss_pred             CcCHHHHHHHHHHHHCCCEEEEEecCc-cccc----------cccceEE--Eecchhhhhhhhcccc---CcceeEEEec
Confidence            368899999999999999999888763 2110          2345555  4666777766666554   3459999999


Q ss_pred             CCC
Q 025509           88 GIM   90 (251)
Q Consensus        88 g~~   90 (251)
                      ++.
T Consensus        91 AVs   93 (185)
T PF04127_consen   91 AVS   93 (185)
T ss_dssp             B--
T ss_pred             chh
Confidence            974

These proteins contain ATP, phosphopantothenate, and cysteine binding sites. The structure of this domain has been determined in human phosphopantothenoylcysteine (PPC) synthetase [] and as the PPC synthase domain (CoaB) from the Escherichia coli coenzyme A bifunctional protein CoaBC []. This domain adopts a 3-layer alpha/beta/alpha fold with mixed beta-sheets, which topologically resembles a combination of Rossmann-like and ribokinase-like folds. The structure of these proteins predicts a ping pong mechanism with initial formation of an acyladenylate intermediate, followed by release of pyrophosphate and attack by cysteine to form the final products PPC and AMP. ; PDB: 1U7W_A 1U7U_A 1U80_C 1U7Z_A 1P9O_B 2GK4_A.

>PRK07688 thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein; Validated

Probab=97.42  E-value=0.0017  Score=56.58  Aligned_cols=78  Identities=22%  Similarity=0.417  Sum_probs=55.8

Q ss_pred             EEEEECCCChhHHHHHHHHHHcCC-EEEEEecCc---------------------hhHHHHHHHHHhhCCCCceEEEEec
Q 025509            2 DIVITGATSGIGTETARVLALRGV-HVVMGVRDI---------------------AAGKDVKETIVKEIPSAKVDAMELD   59 (251)
Q Consensus         2 ~vlItG~s~gIG~a~a~~l~~~G~-~Vi~~~r~~---------------------~~~~~~~~~~~~~~~~~~v~~~~~D   59 (251)
                      +|+|.|+ ||+|.++|+.|++.|. ++.+++.+.                     .+.+.+.+.+.+..|...+..+..|
T Consensus        26 ~VlVvG~-GglGs~va~~La~aGvg~i~lvD~D~Ve~sNL~RQ~l~~~~dig~g~~Ka~aa~~~l~~inp~v~v~~~~~~  104 (339)
T PRK07688         26 HVLIIGA-GALGTANAEMLVRAGVGKVTIVDRDYVEWSNLQRQQLYTESDVKNNLPKAVAAKKRLEEINSDVRVEAIVQD  104 (339)
T ss_pred             cEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCccCHHHcCccccccHHHhcCCCcHHHHHHHHHHHHCCCcEEEEEecc
Confidence            5889987 7999999999999998 899999863                     3445555666666666667777777


Q ss_pred             CCCHHHHHHHHHHHHhcCCCeeEEEEcCC
Q 025509           60 LSSLASVRNFASEYNIQHHQLNILINNAG   88 (251)
Q Consensus        60 ~~~~~~i~~~~~~~~~~~g~id~lv~~ag   88 (251)
                      ++. +.+..+++       +.|+||.+..
T Consensus       105 ~~~-~~~~~~~~-------~~DlVid~~D  125 (339)
T PRK07688        105 VTA-EELEELVT-------GVDLIIDATD  125 (339)
T ss_pred             CCH-HHHHHHHc-------CCCEEEEcCC
Confidence            753 33433322       5688877753

>cd01487 E1_ThiF_like E1_ThiF_like

Probab=97.41  E-value=0.0019  Score=50.84  Aligned_cols=77  Identities=22%  Similarity=0.394  Sum_probs=52.1

Q ss_pred             EEEEECCCChhHHHHHHHHHHcCC-EEEEEecCc------------------hhHHHHHHHHHhhCCCCceEEEEecCCC
Q 025509            2 DIVITGATSGIGTETARVLALRGV-HVVMGVRDI------------------AAGKDVKETIVKEIPSAKVDAMELDLSS   62 (251)
Q Consensus         2 ~vlItG~s~gIG~a~a~~l~~~G~-~Vi~~~r~~------------------~~~~~~~~~~~~~~~~~~v~~~~~D~~~   62 (251)
                      +|+|.|+ ||+|..+++.|++.|. ++.+++.+.                  .+.+.+.+.+++..|..++..+...+..
T Consensus         1 ~VlViG~-GglGs~ia~~La~~Gvg~i~lvD~D~v~~sNl~Rq~~~~~~vg~~Ka~~~~~~l~~lnp~v~i~~~~~~~~~   79 (174)
T cd01487           1 KVGIAGA-GGLGSNIAVLLARSGVGNLKLVDFDVVEPSNLNRQQYFLSQIGEPKVEALKENLREINPFVKIEAINIKIDE   79 (174)
T ss_pred             CEEEECc-CHHHHHHHHHHHHcCCCeEEEEeCCEEcCcchhcccccHhhCCChHHHHHHHHHHHHCCCCEEEEEEeecCh
Confidence            3788885 8999999999999998 699999875                  2344455556566566666666555543


Q ss_pred             HHHHHHHHHHHHhcCCCeeEEEEcC
Q 025509           63 LASVRNFASEYNIQHHQLNILINNA   87 (251)
Q Consensus        63 ~~~i~~~~~~~~~~~g~id~lv~~a   87 (251)
                       +.+.+++       ...|+||.+.
T Consensus        80 -~~~~~~l-------~~~DlVi~~~   96 (174)
T cd01487          80 -NNLEGLF-------GDCDIVVEAF   96 (174)
T ss_pred             -hhHHHHh-------cCCCEEEECC
Confidence             3333322       2577887774

Member of superfamily of activating enzymes (E1) of the ubiquitin-like proteins. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.

>cd05294 LDH-like_MDH_nadp A lactate dehydrogenases-like structure with malate dehydrogenase enzymatic activity

Probab=97.37  E-value=0.0036  Score=53.96  Aligned_cols=118  Identities=23%  Similarity=0.287  Sum_probs=68.9

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCC--EEEEEecCc--hhHHHHHHHHHhhCCCCceEEEEecCC-CHHHHHHHHHHHHh
Q 025509            1 MDIVITGATSGIGTETARVLALRGV--HVVMGVRDI--AAGKDVKETIVKEIPSAKVDAMELDLS-SLASVRNFASEYNI   75 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~--~Vi~~~r~~--~~~~~~~~~~~~~~~~~~v~~~~~D~~-~~~~i~~~~~~~~~   75 (251)
                      ++|.|+|++|.+|.+++..|+..|.  .|++++|++  +++......+.+......... .+..+ +.+       .+  
T Consensus         1 ~kI~IiGatG~vG~~~a~~l~~~g~~~~v~lvd~~~~~~~l~~~~~dl~d~~~~~~~~~-~i~~~~d~~-------~l--   70 (309)
T cd05294           1 MKVSIIGASGRVGSATALLLAKEDVVKEINLISRPKSLEKLKGLRLDIYDALAAAGIDA-EIKISSDLS-------DV--   70 (309)
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCCCEEEEEECcccccccccccchhhhchhccCCCc-EEEECCCHH-------Hh--
Confidence            5799999999999999999999986  599999954  444444433433211110100 11111 211       11  


Q ss_pred             cCCCeeEEEEcCCCCCCCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCc
Q 025509           76 QHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSE  142 (251)
Q Consensus        76 ~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~  142 (251)
                        ...|++|.++|..... ..+   -.+.++.|..    +++.+.+.+.+.    ++.+.++++++.
T Consensus        71 --~~aDiViitag~p~~~-~~~---r~dl~~~n~~----i~~~~~~~i~~~----~~~~~viv~~np  123 (309)
T cd05294          71 --AGSDIVIITAGVPRKE-GMS---RLDLAKKNAK----IVKKYAKQIAEF----APDTKILVVTNP  123 (309)
T ss_pred             --CCCCEEEEecCCCCCC-CCC---HHHHHHHHHH----HHHHHHHHHHHH----CCCeEEEEeCCc
Confidence              3789999999974321 112   2334455544    344444444443    246788888874

The LDH-like MDH proteins have a lactate dehyhydrogenase-like (LDH-like) structure and malate dehydrogenase (MDH) enzymatic activity. This subgroup is composed of some archaeal LDH-like MDHs that prefer NADP(H) rather than NAD(H) as a cofactor. One member, MJ0490 from Methanococcus jannaschii, has been observed to form dimers and tetramers during crystalization, although it is believed to exist primarilly as a tetramer in solution. In addition to its MDH activity, MJ0490 also possesses fructose-1,6-bisphosphate-activated LDH activity. Members of this subgroup have a higher sequence similarity to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carbox

>PRK00066 ldh L-lactate dehydrogenase; Reviewed

Probab=97.36  E-value=0.01  Score=51.28  Aligned_cols=116  Identities=13%  Similarity=0.177  Sum_probs=76.6

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCC--EEEEEecCchhHHHHHHHHHhhCCC-CceEEEEecCCCHHHHHHHHHHHHhcC
Q 025509            1 MDIVITGATSGIGTETARVLALRGV--HVVMGVRDIAAGKDVKETIVKEIPS-AKVDAMELDLSSLASVRNFASEYNIQH   77 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~--~Vi~~~r~~~~~~~~~~~~~~~~~~-~~v~~~~~D~~~~~~i~~~~~~~~~~~   77 (251)
                      ++|.|+|+ |.+|.++|-.|+..|.  .+++++++++.+.....++.+..+- ..+.+. .  .+.+.+           
T Consensus         7 ~ki~iiGa-G~vG~~~a~~l~~~~~~~el~L~D~~~~~~~g~~~Dl~~~~~~~~~~~i~-~--~~~~~~-----------   71 (315)
T PRK00066          7 NKVVLVGD-GAVGSSYAYALVNQGIADELVIIDINKEKAEGDAMDLSHAVPFTSPTKIY-A--GDYSDC-----------   71 (315)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCCchhHHHHHHHHhhccccCCeEEE-e--CCHHHh-----------
Confidence            36899998 9999999999999886  7999999998888888777765321 122222 1  222221           


Q ss_pred             CCeeEEEEcCCCCCCCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCcc
Q 025509           78 HQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEG  143 (251)
Q Consensus        78 g~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~  143 (251)
                      ...|++|..||....+. ++   -.+.++.|.    .+++...+.+.+.    ++.+.++++|-..
T Consensus        72 ~~adivIitag~~~k~g-~~---R~dll~~N~----~i~~~i~~~i~~~----~~~~~vivvsNP~  125 (315)
T PRK00066         72 KDADLVVITAGAPQKPG-ET---RLDLVEKNL----KIFKSIVGEVMAS----GFDGIFLVASNPV  125 (315)
T ss_pred             CCCCEEEEecCCCCCCC-CC---HHHHHHHHH----HHHHHHHHHHHHh----CCCeEEEEccCcH
Confidence            27899999999754321 12   234455554    3445555666554    2467888888633

>PRK05690 molybdopterin biosynthesis protein MoeB; Provisional

Probab=97.36  E-value=0.0031  Score=52.50  Aligned_cols=79  Identities=13%  Similarity=0.315  Sum_probs=55.3

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCC-EEEEEecCc-------------------hhHHHHHHHHHhhCCCCceEEEEecC
Q 025509            1 MDIVITGATSGIGTETARVLALRGV-HVVMGVRDI-------------------AAGKDVKETIVKEIPSAKVDAMELDL   60 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~-~Vi~~~r~~-------------------~~~~~~~~~~~~~~~~~~v~~~~~D~   60 (251)
                      ++|+|.|+ ||+|.++++.|+..|. ++.+++.+.                   .+.+.+.+.+.+..|..++..+...+
T Consensus        33 ~~VliiG~-GglGs~va~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~dvG~~Ka~~a~~~l~~lnp~v~i~~~~~~i  111 (245)
T PRK05690         33 ARVLVVGL-GGLGCAASQYLAAAGVGTLTLVDFDTVSLSNLQRQVLHDDATIGQPKVESARAALARINPHIAIETINARL  111 (245)
T ss_pred             CeEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCEECcchhhhhhcCChhhCCChHHHHHHHHHHHHCCCCEEEEEeccC
Confidence            36899988 9999999999999997 788887652                   24455566676766666777776665


Q ss_pred             CCHHHHHHHHHHHHhcCCCeeEEEEcCC
Q 025509           61 SSLASVRNFASEYNIQHHQLNILINNAG   88 (251)
Q Consensus        61 ~~~~~i~~~~~~~~~~~g~id~lv~~ag   88 (251)
                      +. +.+..++       ...|+||.+..
T Consensus       112 ~~-~~~~~~~-------~~~DiVi~~~D  131 (245)
T PRK05690        112 DD-DELAALI-------AGHDLVLDCTD  131 (245)
T ss_pred             CH-HHHHHHH-------hcCCEEEecCC
Confidence            42 3333332       26788888764

>PRK08762 molybdopterin biosynthesis protein MoeB; Validated

Probab=97.34  E-value=0.0022  Score=56.79  Aligned_cols=78  Identities=21%  Similarity=0.378  Sum_probs=57.0

Q ss_pred             EEEEECCCChhHHHHHHHHHHcCC-EEEEEecC-------------------chhHHHHHHHHHhhCCCCceEEEEecCC
Q 025509            2 DIVITGATSGIGTETARVLALRGV-HVVMGVRD-------------------IAAGKDVKETIVKEIPSAKVDAMELDLS   61 (251)
Q Consensus         2 ~vlItG~s~gIG~a~a~~l~~~G~-~Vi~~~r~-------------------~~~~~~~~~~~~~~~~~~~v~~~~~D~~   61 (251)
                      +|+|.|+ ||+|.++++.|+..|. ++.+++++                   ..+.+.+.+.+.+..|...+..+...+.
T Consensus       137 ~VlvvG~-GG~Gs~ia~~La~~Gvg~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~np~v~v~~~~~~~~  215 (376)
T PRK08762        137 RVLLIGA-GGLGSPAALYLAAAGVGTLGIVDHDVVDRSNLQRQILHTEDRVGQPKVDSAAQRLAALNPDVQVEAVQERVT  215 (376)
T ss_pred             cEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCEecchhhccccccchhhCCCcHHHHHHHHHHHHCCCCEEEEEeccCC
Confidence            5777755 8999999999999998 89999987                   4567777777877766666666655554


Q ss_pred             CHHHHHHHHHHHHhcCCCeeEEEEcCC
Q 025509           62 SLASVRNFASEYNIQHHQLNILINNAG   88 (251)
Q Consensus        62 ~~~~i~~~~~~~~~~~g~id~lv~~ag   88 (251)
                      + +.+..+++       ..|+||++..
T Consensus       216 ~-~~~~~~~~-------~~D~Vv~~~d  234 (376)
T PRK08762        216 S-DNVEALLQ-------DVDVVVDGAD  234 (376)
T ss_pred             h-HHHHHHHh-------CCCEEEECCC
Confidence            3 33333332       5788888875

>PF00899 ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-activating enzyme (E1 enzyme) [, ] activates ubiquitin by first adenylating with ATP its C-terminal glycine residue and thereafter linking this residue to the side chain of a cysteine residue in E1, yielding an ubiquitin-E1 thiolester and free AMP

Probab=97.31  E-value=0.0054  Score=46.04  Aligned_cols=79  Identities=23%  Similarity=0.412  Sum_probs=59.8

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCC-EEEEEecC-------------------chhHHHHHHHHHhhCCCCceEEEEecC
Q 025509            1 MDIVITGATSGIGTETARVLALRGV-HVVMGVRD-------------------IAAGKDVKETIVKEIPSAKVDAMELDL   60 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~-~Vi~~~r~-------------------~~~~~~~~~~~~~~~~~~~v~~~~~D~   60 (251)
                      ++|+|.| .||+|..+++.|++.|. ++.+++.+                   ..+.+-+.+.+.+..|..++..+..++
T Consensus         3 ~~v~iiG-~G~vGs~va~~L~~~Gv~~i~lvD~d~v~~~nl~r~~~~~~~~vG~~Ka~~~~~~l~~~np~~~v~~~~~~~   81 (135)
T PF00899_consen    3 KRVLIIG-AGGVGSEVAKNLARSGVGKITLVDDDIVEPSNLNRQFLYTEEDVGKNKAEAAKERLQEINPDVEVEAIPEKI   81 (135)
T ss_dssp             -EEEEES-TSHHHHHHHHHHHHHTTSEEEEEESSBB-GGGCCTCTTS-GGGTTSBHHHHHHHHHHHHSTTSEEEEEESHC
T ss_pred             CEEEEEC-cCHHHHHHHHHHHHhCCCceeecCCcceeecccccccccccccchhHHHHHHHHHHHHhcCceeeeeeeccc
Confidence            3577776 57999999999999998 78888765                   224666777788888888888888888


Q ss_pred             CCHHHHHHHHHHHHhcCCCeeEEEEcCC
Q 025509           61 SSLASVRNFASEYNIQHHQLNILINNAG   88 (251)
Q Consensus        61 ~~~~~i~~~~~~~~~~~g~id~lv~~ag   88 (251)
                       +.+...++++       ..|++|.+..
T Consensus        82 -~~~~~~~~~~-------~~d~vi~~~d  101 (135)
T PF00899_consen   82 -DEENIEELLK-------DYDIVIDCVD  101 (135)
T ss_dssp             -SHHHHHHHHH-------TSSEEEEESS
T ss_pred             -cccccccccc-------CCCEEEEecC
Confidence             4455555553       6789988764

Later the ubiquitin moiety is transferred to a cysteine residue on one of the many forms of ubiquitin- conjugating enzymes (E2). The family of ubiquitin-activating enzymes shares in its catalytic domain significant similarity with a large family of NAD/FAD-binding proteins. This domain is based on the common NAD/FAD-binding fold and finds members of several families, including UBA ubiquitin activating enzymes; the hesA/moeB/thiF family; NADH peroxidases; the LDH family; sarcosin oxidase; phytoene dehydrogenases; alanine dehydrogenases; hydroxyacyl-CoA dehydrogenases and many other NAD/FAD dependent dehydrogenases and oxidases.; GO: 0003824 catalytic activity; PDB: 1ZKM_D 1ZUD_3 1ZFN_D 1R4M_G 2NVU_A 1R4N_C 3DBR_A 3DBH_C 3DBL_G 1YOV_A ....

>PRK08644 thiamine biosynthesis protein ThiF; Provisional

Probab=97.25  E-value=0.0041  Score=50.57  Aligned_cols=77  Identities=21%  Similarity=0.370  Sum_probs=53.4

Q ss_pred             EEEEECCCChhHHHHHHHHHHcCC-EEEEEecCc------------------hhHHHHHHHHHhhCCCCceEEEEecCCC
Q 025509            2 DIVITGATSGIGTETARVLALRGV-HVVMGVRDI------------------AAGKDVKETIVKEIPSAKVDAMELDLSS   62 (251)
Q Consensus         2 ~vlItG~s~gIG~a~a~~l~~~G~-~Vi~~~r~~------------------~~~~~~~~~~~~~~~~~~v~~~~~D~~~   62 (251)
                      +|+|.|+ ||+|..+++.|++.|. ++.+++.+.                  .+.+.+.+.+.+..|..++..+...+++
T Consensus        30 ~V~ViG~-GglGs~ia~~La~~Gvg~i~lvD~D~ve~sNL~Rq~~~~~dvG~~Ka~~a~~~l~~lnp~v~v~~~~~~i~~  108 (212)
T PRK08644         30 KVGIAGA-GGLGSNIAVALARSGVGNLKLVDFDVVEPSNLNRQQYFISQIGMPKVEALKENLLEINPFVEIEAHNEKIDE  108 (212)
T ss_pred             CEEEECc-CHHHHHHHHHHHHcCCCeEEEEeCCEeccccccccEeehhhCCChHHHHHHHHHHHHCCCCEEEEEeeecCH
Confidence            5788885 8999999999999998 699998872                  3455556666666666666666666653


Q ss_pred             HHHHHHHHHHHHhcCCCeeEEEEcC
Q 025509           63 LASVRNFASEYNIQHHQLNILINNA   87 (251)
Q Consensus        63 ~~~i~~~~~~~~~~~g~id~lv~~a   87 (251)
                       +.+.+++       ...|+||.+.
T Consensus       109 -~~~~~~~-------~~~DvVI~a~  125 (212)
T PRK08644        109 -DNIEELF-------KDCDIVVEAF  125 (212)
T ss_pred             -HHHHHHH-------cCCCEEEECC
Confidence             3333322       2578888774

>PRK05597 molybdopterin biosynthesis protein MoeB; Validated

Probab=97.25  E-value=0.0042  Score=54.56  Aligned_cols=59  Identities=25%  Similarity=0.397  Sum_probs=47.2

Q ss_pred             EEEEECCCChhHHHHHHHHHHcCC-EEEEEecCc-------------------hhHHHHHHHHHhhCCCCceEEEEecCC
Q 025509            2 DIVITGATSGIGTETARVLALRGV-HVVMGVRDI-------------------AAGKDVKETIVKEIPSAKVDAMELDLS   61 (251)
Q Consensus         2 ~vlItG~s~gIG~a~a~~l~~~G~-~Vi~~~r~~-------------------~~~~~~~~~~~~~~~~~~v~~~~~D~~   61 (251)
                      +|+|.|+ ||+|.++++.|+..|. ++.+++.+.                   .+.+.+.+.+.+..|...+..+...++
T Consensus        30 ~VlivG~-GGlGs~~a~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~a~~~l~~~np~v~v~~~~~~i~  108 (355)
T PRK05597         30 KVAVIGA-GGLGSPALLYLAGAGVGHITIIDDDTVDLSNLHRQVIHSTAGVGQPKAESAREAMLALNPDVKVTVSVRRLT  108 (355)
T ss_pred             eEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCEEcccccccCcccChhHCCChHHHHHHHHHHHHCCCcEEEEEEeecC
Confidence            6888887 7999999999999998 899988763                   356677777888777777777666654

>cd01483 E1_enzyme_family Superfamily of activating enzymes (E1) of the ubiquitin-like proteins

Probab=97.24  E-value=0.0038  Score=47.35  Aligned_cols=78  Identities=19%  Similarity=0.264  Sum_probs=53.6

Q ss_pred             EEEEECCCChhHHHHHHHHHHcCC-EEEEEecC-------------------chhHHHHHHHHHhhCCCCceEEEEecCC
Q 025509            2 DIVITGATSGIGTETARVLALRGV-HVVMGVRD-------------------IAAGKDVKETIVKEIPSAKVDAMELDLS   61 (251)
Q Consensus         2 ~vlItG~s~gIG~a~a~~l~~~G~-~Vi~~~r~-------------------~~~~~~~~~~~~~~~~~~~v~~~~~D~~   61 (251)
                      +|+|.|+ ||+|.++++.|++.|. ++.+++.+                   ..+.+.+.+.+++..|..++..+..++.
T Consensus         1 ~VliiG~-GglGs~ia~~L~~~Gv~~i~ivD~d~v~~~nl~r~~~~~~~~vG~~Ka~~~~~~l~~~~p~v~i~~~~~~~~   79 (143)
T cd01483           1 RVLLVGL-GGLGSEIALNLARSGVGKITLIDFDTVELSNLNRQFLARQADIGKPKAEVAARRLNELNPGVNVTAVPEGIS   79 (143)
T ss_pred             CEEEECC-CHHHHHHHHHHHHCCCCEEEEEcCCCcCcchhhccccCChhHCCChHHHHHHHHHHHHCCCcEEEEEeeecC
Confidence            4788887 8999999999999998 78888754                   1244555666666666666666766665


Q ss_pred             CHHHHHHHHHHHHhcCCCeeEEEEcCC
Q 025509           62 SLASVRNFASEYNIQHHQLNILINNAG   88 (251)
Q Consensus        62 ~~~~i~~~~~~~~~~~g~id~lv~~ag   88 (251)
                      +... ..       ...+.|++|.+..
T Consensus        80 ~~~~-~~-------~~~~~diVi~~~d   98 (143)
T cd01483          80 EDNL-DD-------FLDGVDLVIDAID   98 (143)
T ss_pred             hhhH-HH-------HhcCCCEEEECCC
Confidence            4322 11       1236788888775

This family includes classical ubiquitin-activating enzymes E1, ubiquitin-like (ubl) activating enzymes and other mechanistic homologes, like MoeB, Thif1 and others. The common reaction mechanism catalyzed by MoeB, ThiF and the E1 enzymes begins with a nucleophilic attack of the C-terminal carboxylate of MoaD, ThiS and ubiquitin, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS.

>cd00757 ThiF_MoeB_HesA_family ThiF_MoeB_HesA

Probab=97.23  E-value=0.0043  Score=51.02  Aligned_cols=78  Identities=17%  Similarity=0.341  Sum_probs=55.9

Q ss_pred             EEEEECCCChhHHHHHHHHHHcCC-EEEEEecC-------------------chhHHHHHHHHHhhCCCCceEEEEecCC
Q 025509            2 DIVITGATSGIGTETARVLALRGV-HVVMGVRD-------------------IAAGKDVKETIVKEIPSAKVDAMELDLS   61 (251)
Q Consensus         2 ~vlItG~s~gIG~a~a~~l~~~G~-~Vi~~~r~-------------------~~~~~~~~~~~~~~~~~~~v~~~~~D~~   61 (251)
                      +|+|.| .||+|.++|+.|++.|. ++.+++.+                   ..+.+.+.+.+.+..|..++..+..+++
T Consensus        23 ~VlivG-~GglGs~va~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~i~~~~~~i~  101 (228)
T cd00757          23 RVLVVG-AGGLGSPAAEYLAAAGVGKLGLVDDDVVELSNLQRQILHTEADVGQPKAEAAAERLRAINPDVEIEAYNERLD  101 (228)
T ss_pred             cEEEEC-CCHHHHHHHHHHHHcCCCEEEEEcCCEEcCcccccccccChhhCCChHHHHHHHHHHHhCCCCEEEEecceeC
Confidence            578887 67999999999999998 78887543                   3355666777777777667777776664


Q ss_pred             CHHHHHHHHHHHHhcCCCeeEEEEcCC
Q 025509           62 SLASVRNFASEYNIQHHQLNILINNAG   88 (251)
Q Consensus        62 ~~~~i~~~~~~~~~~~g~id~lv~~ag   88 (251)
                       .+.+.++++       ..|+||.+..
T Consensus       102 -~~~~~~~~~-------~~DvVi~~~d  120 (228)
T cd00757         102 -AENAEELIA-------GYDLVLDCTD  120 (228)
T ss_pred             -HHHHHHHHh-------CCCEEEEcCC
Confidence             334433332       5899988875

Family of E1-like enzymes involved in molybdopterin and thiamine biosynthesis family. The common reaction mechanism catalyzed by MoeB and ThiF, like other E1 enzymes, begins with a nucleophilic attack of the C-terminal carboxylate of MoaD and ThiS, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS. MoeB, as the MPT synthase (MoaE/MoaD complex) sulfurase, is involved in the biosynthesis of the molybdenum cofactor, a derivative of the tricyclic pterin, molybdopterin (MPT). ThiF catalyzes the adenylation of ThiS, as part of the biosynthesis pathway of thiamin pyrophosphate (vitamin B1).

>cd08295 double_bond_reductase_like Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase

Probab=97.20  E-value=0.0024  Score=55.37  Aligned_cols=78  Identities=15%  Similarity=0.242  Sum_probs=51.9

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      +++||+|+++++|.++++.+...|++|+.+++++++.+.+.+.+     +... +  .|..+.++..+.+.++..  +++
T Consensus       153 ~~VlI~Ga~G~vG~~aiqlAk~~G~~Vi~~~~~~~~~~~~~~~l-----Ga~~-v--i~~~~~~~~~~~i~~~~~--~gv  222 (338)
T cd08295         153 ETVFVSAASGAVGQLVGQLAKLKGCYVVGSAGSDEKVDLLKNKL-----GFDD-A--FNYKEEPDLDAALKRYFP--NGI  222 (338)
T ss_pred             CEEEEecCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhc-----CCce-e--EEcCCcccHHHHHHHhCC--CCc
Confidence            36999999999999999888888999999998877655554323     3221 1  232222233333333322  479


Q ss_pred             eEEEEcCC
Q 025509           81 NILINNAG   88 (251)
Q Consensus        81 d~lv~~ag   88 (251)
                      |+++.+.|
T Consensus       223 d~v~d~~g  230 (338)
T cd08295         223 DIYFDNVG  230 (338)
T ss_pred             EEEEECCC
Confidence            99999887

This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in

>PRK12549 shikimate 5-dehydrogenase; Reviewed

Probab=97.19  E-value=0.0025  Score=54.28  Aligned_cols=74  Identities=19%  Similarity=0.219  Sum_probs=52.8

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCC-EEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCC
Q 025509            1 MDIVITGATSGIGTETARVLALRGV-HVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQ   79 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~   79 (251)
                      |+++|.|+ ||.|++++..|++.|+ +|.+++|+.++++.+.+.+.+..+.  +.+..  .   +++.+   .    ...
T Consensus       128 k~vlIlGa-GGaaraia~aL~~~G~~~I~I~nR~~~ka~~la~~l~~~~~~--~~~~~--~---~~~~~---~----~~~  192 (284)
T PRK12549        128 ERVVQLGA-GGAGAAVAHALLTLGVERLTIFDVDPARAAALADELNARFPA--ARATA--G---SDLAA---A----LAA  192 (284)
T ss_pred             CEEEEECC-cHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHhhCCC--eEEEe--c---cchHh---h----hCC
Confidence            46889986 7899999999999998 7999999999999888887655432  22221  1   11111   1    135


Q ss_pred             eeEEEEcCCC
Q 025509           80 LNILINNAGI   89 (251)
Q Consensus        80 id~lv~~ag~   89 (251)
                      .|+||++...
T Consensus       193 aDiVInaTp~  202 (284)
T PRK12549        193 ADGLVHATPT  202 (284)
T ss_pred             CCEEEECCcC
Confidence            8999999653

>cd01337 MDH_glyoxysomal_mitochondrial Glyoxysomal and mitochondrial malate dehydrogenases

Probab=97.18  E-value=0.015  Score=49.98  Aligned_cols=118  Identities=14%  Similarity=0.141  Sum_probs=71.0

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCC--EEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCC
Q 025509            1 MDIVITGATSGIGTETARVLALRGV--HVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHH   78 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~--~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g   78 (251)
                      ++|.|+|++|.+|.++|-.|+..|.  .+++++.+  +++...-.+.+..+  .+.+..+. .+ +++       .+...
T Consensus         1 ~KI~IIGaaG~VG~~~a~~l~~~~~~~elvLiDi~--~a~g~alDL~~~~~--~~~i~~~~-~~-~~~-------y~~~~   67 (310)
T cd01337           1 VKVAVLGAAGGIGQPLSLLLKLNPLVSELALYDIV--NTPGVAADLSHINT--PAKVTGYL-GP-EEL-------KKALK   67 (310)
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCCcEEEEEecC--ccceeehHhHhCCC--cceEEEec-CC-Cch-------HHhcC
Confidence            4789999999999999999998884  79999987  43333333433221  11111110 11 111       12234


Q ss_pred             CeeEEEEcCCCCCCCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCcc
Q 025509           79 QLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEG  143 (251)
Q Consensus        79 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~  143 (251)
                      ..|++|.+||....+.    +.=.+.++.|..    +++...+.+.+.    ++.+.++++|...
T Consensus        68 daDivvitaG~~~k~g----~tR~dll~~N~~----i~~~i~~~i~~~----~p~a~vivvtNPv  120 (310)
T cd01337          68 GADVVVIPAGVPRKPG----MTRDDLFNINAG----IVRDLATAVAKA----CPKALILIISNPV  120 (310)
T ss_pred             CCCEEEEeCCCCCCCC----CCHHHHHHHHHH----HHHHHHHHHHHh----CCCeEEEEccCch
Confidence            7899999999754322    123445666654    445555555554    3568888888754

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are localized to the glycosome and mitochondria. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PRK14027 quinate/shikimate dehydrogenase; Provisional

Probab=97.18  E-value=0.0028  Score=53.85  Aligned_cols=77  Identities=18%  Similarity=0.287  Sum_probs=53.0

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCC-EEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCC
Q 025509            1 MDIVITGATSGIGTETARVLALRGV-HVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQ   79 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~   79 (251)
                      |+++|.|+ ||-|++++-.|++.|+ +|.++.|+.++++++.+.+.+.++...+.  ..|.   ..+....       ..
T Consensus       128 k~vlilGa-GGaarAi~~aL~~~g~~~i~i~nR~~~ka~~La~~~~~~~~~~~~~--~~~~---~~~~~~~-------~~  194 (283)
T PRK14027        128 DSVVQVGA-GGVGNAVAYALVTHGVQKLQVADLDTSRAQALADVINNAVGREAVV--GVDA---RGIEDVI-------AA  194 (283)
T ss_pred             CeEEEECC-cHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHhhccCcceEE--ecCH---hHHHHHH-------hh
Confidence            46889987 8999999999999997 79999999999888887765433221121  1222   2222111       25


Q ss_pred             eeEEEEcCCCC
Q 025509           80 LNILINNAGIM   90 (251)
Q Consensus        80 id~lv~~ag~~   90 (251)
                      .|+|||+....
T Consensus       195 ~divINaTp~G  205 (283)
T PRK14027        195 ADGVVNATPMG  205 (283)
T ss_pred             cCEEEEcCCCC
Confidence            79999998753

>COG0604 Qor NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only]

Probab=97.16  E-value=0.0028  Score=55.01  Aligned_cols=78  Identities=14%  Similarity=0.233  Sum_probs=50.1

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      ++|||+||+||+|...++.....|++++++..+.++.+ ...++     +....   .|..+.+ +.+-+.++... .++
T Consensus       144 ~~VLV~gaaGgVG~~aiQlAk~~G~~~v~~~~s~~k~~-~~~~l-----GAd~v---i~y~~~~-~~~~v~~~t~g-~gv  212 (326)
T COG0604         144 ETVLVHGAAGGVGSAAIQLAKALGATVVAVVSSSEKLE-LLKEL-----GADHV---INYREED-FVEQVRELTGG-KGV  212 (326)
T ss_pred             CEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHH-HHHhc-----CCCEE---EcCCccc-HHHHHHHHcCC-CCc
Confidence            47999999999999999998899987776666655555 43333     33211   2333333 33333333221 269


Q ss_pred             eEEEEcCCC
Q 025509           81 NILINNAGI   89 (251)
Q Consensus        81 d~lv~~ag~   89 (251)
                      |+++...|.
T Consensus       213 Dvv~D~vG~  221 (326)
T COG0604         213 DVVLDTVGG  221 (326)
T ss_pred             eEEEECCCH
Confidence            999999883

>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA

Probab=97.14  E-value=0.011  Score=63.75  Aligned_cols=181  Identities=12%  Similarity=0.063  Sum_probs=106.5

Q ss_pred             EEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCee
Q 025509            2 DIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQLN   81 (251)
Q Consensus         2 ~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~id   81 (251)
                      .++|++.+++++.+++..|.++|+.|+++..... .......+     +..+..+.+.-.+.+++..+++.+....+.++
T Consensus      1757 ~~~v~~d~~~~~~~L~~~L~~~G~~v~~~~~~~~-~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1830 (2582)
T TIGR02813      1757 NALVIDDDGHNAGVLAEKLIAAGWQVAVVRSPWV-VSHSASPL-----ASAIASVTLGTIDDTSIEAVIKDIEEKTAQID 1830 (2582)
T ss_pred             eeEEEcCCcchHHHHHHHHHhCCCeEEEeecccc-cccccccc-----ccccccccccccchHHHHHHHHhhhccccccc
Confidence            4678888899999999999999998877642211 00000000     12233344445567888888888877778899


Q ss_pred             EEEEcCCCCCCCCc-CCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccccCCCC
Q 025509           82 ILINNAGIMGTPFM-LSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDP  160 (251)
Q Consensus        82 ~lv~~ag~~~~~~~-~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~  160 (251)
                      .+||-.+......+ .+.......-...+...+.++|.+.+.+...     +.+.++.++...|..+.......      
T Consensus      1831 g~i~l~~~~~~~~~~~~~~~~~~~~~~~l~~~f~~ak~~~~~l~~~-----~~~~~~~vsr~~G~~g~~~~~~~------ 1899 (2582)
T TIGR02813      1831 GFIHLQPQHKSVADKVDAIELPEAAKQSLMLAFLFAKLLNVKLATN-----ARASFVTVSRIDGGFGYSNGDAD------ 1899 (2582)
T ss_pred             eEEEeccccccccccccccccchhhHHHHHHHHHHHHhhchhhccC-----CCeEEEEEEecCCccccCCcccc------
Confidence            99998774322100 0000111122234455667777766655432     35688888887655531110000      


Q ss_pred             CCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCC
Q 025509          161 SGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPG  202 (251)
Q Consensus       161 ~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg  202 (251)
                      .++.. .--....+++.+|+|+++.|+..--  ++...+.|.
T Consensus      1900 ~~~~~-~~~~~~~a~l~Gl~Ktl~~E~P~~~--~r~vDl~~~ 1938 (2582)
T TIGR02813      1900 SGTQQ-VKAELNQAALAGLTKTLNHEWNAVF--CRALDLAPK 1938 (2582)
T ss_pred             ccccc-cccchhhhhHHHHHHhHHHHCCCCe--EEEEeCCCC
Confidence            00000 0012357899999999999998655  888777775

Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD.

>TIGR01915 npdG NADPH-dependent F420 reductase

Probab=97.14  E-value=0.0036  Score=51.16  Aligned_cols=44  Identities=27%  Similarity=0.455  Sum_probs=38.6

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHH
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETI   44 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~   44 (251)
                      |+|.|+||+|.+|.++++.|++.|++|.+.+|++++.+...+..
T Consensus         1 MkI~IIGG~G~mG~ala~~L~~~G~~V~v~~r~~~~~~~l~~~~   44 (219)
T TIGR01915         1 MKIAVLGGTGDQGKGLALRLAKAGNKIIIGSRDLEKAEEAAAKA   44 (219)
T ss_pred             CEEEEEcCCCHHHHHHHHHHHhCCCEEEEEEcCHHHHHHHHHHH
Confidence            57899999999999999999999999999999988877665543

This model represents a subset of a parent family described by Pfam model pfam03807. Unlike the parent family, members of this family are found only in species with evidence of coenzyme F420. All members of this family are believed to act as NADPH-dependent F420 reductase.

>cd05293 LDH_1 A subgroup of L-lactate dehydrogenases

Probab=97.13  E-value=0.023  Score=48.98  Aligned_cols=116  Identities=12%  Similarity=0.038  Sum_probs=75.3

Q ss_pred             EEEEECCCChhHHHHHHHHHHcCC--EEEEEecCchhHHHHHHHHHhhCCC-CceEEEEecCCCHHHHHHHHHHHHhcCC
Q 025509            2 DIVITGATSGIGTETARVLALRGV--HVVMGVRDIAAGKDVKETIVKEIPS-AKVDAMELDLSSLASVRNFASEYNIQHH   78 (251)
Q Consensus         2 ~vlItG~s~gIG~a~a~~l~~~G~--~Vi~~~r~~~~~~~~~~~~~~~~~~-~~v~~~~~D~~~~~~i~~~~~~~~~~~g   78 (251)
                      +|.|+|+ |.+|.++|-.|+..|.  .+++++.+++.+.....++....+- ....+...  .+++.+           .
T Consensus         5 Ki~IiGa-G~VG~~~a~~l~~~~~~~el~LiD~~~~~~~g~a~Dl~~~~~~~~~~~v~~~--~dy~~~-----------~   70 (312)
T cd05293           5 KVTVVGV-GQVGMACAISILAKGLADELVLVDVVEDKLKGEAMDLQHGSAFLKNPKIEAD--KDYSVT-----------A   70 (312)
T ss_pred             EEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCccHHHHHHHHHHHhhccCCCCEEEEC--CCHHHh-----------C
Confidence            6899996 9999999999998874  7999999988877777777664321 11122211  222221           2


Q ss_pred             CeeEEEEcCCCCCCCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCcc
Q 025509           79 QLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEG  143 (251)
Q Consensus        79 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~  143 (251)
                      ..|++|.+||....+ .++   -.+.++.|.    .+++.+.+.+.+.    ++.+.++++|...
T Consensus        71 ~adivvitaG~~~k~-g~~---R~dll~~N~----~i~~~~~~~i~~~----~p~~~vivvsNP~  123 (312)
T cd05293          71 NSKVVIVTAGARQNE-GES---RLDLVQRNV----DIFKGIIPKLVKY----SPNAILLVVSNPV  123 (312)
T ss_pred             CCCEEEECCCCCCCC-CCC---HHHHHHHHH----HHHHHHHHHHHHh----CCCcEEEEccChH
Confidence            789999999975432 122   233455553    4456666666665    3578888888643

L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of eukaryotic LDHs. Vertebrate LDHs are non-allosteric. This is in contrast to some bacterial LDHs that are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>cd01489 Uba2_SUMO Ubiquitin activating enzyme (E1) subunit UBA2

Probab=97.13  E-value=0.0039  Score=53.62  Aligned_cols=60  Identities=25%  Similarity=0.412  Sum_probs=43.3

Q ss_pred             EEEEECCCChhHHHHHHHHHHcCC-EEEEEecCc-------------------hhHHHHHHHHHhhCCCCceEEEEecCC
Q 025509            2 DIVITGATSGIGTETARVLALRGV-HVVMGVRDI-------------------AAGKDVKETIVKEIPSAKVDAMELDLS   61 (251)
Q Consensus         2 ~vlItG~s~gIG~a~a~~l~~~G~-~Vi~~~r~~-------------------~~~~~~~~~~~~~~~~~~v~~~~~D~~   61 (251)
                      +|||.|+ ||+|.++++.|+..|. ++.+++.+.                   .+++-+.+.+.+..|...+..+..++.
T Consensus         1 kVlIVGa-GGlG~EiaKnLal~Gvg~ItIvD~D~Ve~sNLnRQflf~~~dVGk~Kaevaa~~l~~lNp~v~V~~~~~~i~   79 (312)
T cd01489           1 KVLVVGA-GGIGCELLKNLVLTGFGEIHIIDLDTIDLSNLNRQFLFRKKHVGKSKAQVAKEAVLSFNPNVKIVAYHANIK   79 (312)
T ss_pred             CEEEECC-CHHHHHHHHHHHHhcCCeEEEEcCCCcchhhcCcCccCChhHcCcHHHHHHHHHHHHHCCCCeEEEEeccCC
Confidence            4788886 8999999999999998 788887652                   234444555556556666666666666


Q ss_pred             C
Q 025509           62 S   62 (251)
Q Consensus        62 ~   62 (251)
                      +
T Consensus        80 ~   80 (312)
T cd01489          80 D   80 (312)
T ss_pred             C
Confidence            5

UBA2 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. UBA2 contains both the nucleotide-binding motif involved in adenylation and the catalytic cysteine involved in the thioester intermediate and Ublp transfer to E2.

>PLN03154 putative allyl alcohol dehydrogenase; Provisional

Probab=97.11  E-value=0.0034  Score=54.89  Aligned_cols=78  Identities=15%  Similarity=0.239  Sum_probs=51.5

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      +++||+|++|++|..+++.+...|++|+.+++++++.+.+.+++     +... +  .|..+.+.+.+.+.++..  +++
T Consensus       160 ~~VlV~GaaG~vG~~aiqlAk~~G~~Vi~~~~~~~k~~~~~~~l-----Ga~~-v--i~~~~~~~~~~~i~~~~~--~gv  229 (348)
T PLN03154        160 DSVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKL-----GFDE-A--FNYKEEPDLDAALKRYFP--EGI  229 (348)
T ss_pred             CEEEEecCccHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHhc-----CCCE-E--EECCCcccHHHHHHHHCC--CCc
Confidence            36999999999999999888888999999888876655443333     3321 1  233222233333333322  369


Q ss_pred             eEEEEcCC
Q 025509           81 NILINNAG   88 (251)
Q Consensus        81 d~lv~~ag   88 (251)
                      |+++.+.|
T Consensus       230 D~v~d~vG  237 (348)
T PLN03154        230 DIYFDNVG  237 (348)
T ss_pred             EEEEECCC
Confidence            99999887

>cd08293 PTGR2 Prostaglandin reductase

Probab=97.10  E-value=0.0032  Score=54.66  Aligned_cols=77  Identities=18%  Similarity=0.254  Sum_probs=51.3

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCC-EEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCC
Q 025509            1 MDIVITGATSGIGTETARVLALRGV-HVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQ   79 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~   79 (251)
                      ++|||+|+++++|.++++.+...|+ +|+.+++++++.+.+.+++     +... +  .|..+ +++.+.+.++..  ++
T Consensus       156 ~~VlI~ga~g~vG~~aiqlAk~~G~~~Vi~~~~s~~~~~~~~~~l-----Ga~~-v--i~~~~-~~~~~~i~~~~~--~g  224 (345)
T cd08293         156 QTMVVSGAAGACGSLAGQIGRLLGCSRVVGICGSDEKCQLLKSEL-----GFDA-A--INYKT-DNVAERLRELCP--EG  224 (345)
T ss_pred             CEEEEECCCcHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHhc-----CCcE-E--EECCC-CCHHHHHHHHCC--CC
Confidence            3799999999999999988778898 8999988876655544433     3322 1  22222 223333333322  46


Q ss_pred             eeEEEEcCC
Q 025509           80 LNILINNAG   88 (251)
Q Consensus        80 id~lv~~ag   88 (251)
                      +|+++.+.|
T Consensus       225 vd~vid~~g  233 (345)
T cd08293         225 VDVYFDNVG  233 (345)
T ss_pred             ceEEEECCC
Confidence            999999887

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acid

>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed

Probab=97.07  E-value=0.0028  Score=57.34  Aligned_cols=74  Identities=22%  Similarity=0.205  Sum_probs=52.9

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      |+++|.|+ |.+|.++++.|.++|+.|++++++++..+...+.       ..+.++..|.++.+.+++.      .....
T Consensus         1 m~viIiG~-G~ig~~~a~~L~~~g~~v~vid~~~~~~~~~~~~-------~~~~~~~gd~~~~~~l~~~------~~~~a   66 (453)
T PRK09496          1 MKIIIVGA-GQVGYTLAENLSGENNDVTVIDTDEERLRRLQDR-------LDVRTVVGNGSSPDVLREA------GAEDA   66 (453)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCcEEEEECCHHHHHHHHhh-------cCEEEEEeCCCCHHHHHHc------CCCcC
Confidence            57899987 9999999999999999999999988776654431       2466677777775555432      11245


Q ss_pred             eEEEEcCC
Q 025509           81 NILINNAG   88 (251)
Q Consensus        81 d~lv~~ag   88 (251)
                      |.+|.+.+
T Consensus        67 ~~vi~~~~   74 (453)
T PRK09496         67 DLLIAVTD   74 (453)
T ss_pred             CEEEEecC
Confidence            66666544

>PTZ00117 malate dehydrogenase; Provisional

Probab=97.06  E-value=0.026  Score=48.90  Aligned_cols=117  Identities=14%  Similarity=0.139  Sum_probs=70.7

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcC-CEEEEEecCchhHHHHHHHHHhhCC--CCceEEEEecCCCHHHHHHHHHHHHhcC
Q 025509            1 MDIVITGATSGIGTETARVLALRG-VHVVMGVRDIAAGKDVKETIVKEIP--SAKVDAMELDLSSLASVRNFASEYNIQH   77 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G-~~Vi~~~r~~~~~~~~~~~~~~~~~--~~~v~~~~~D~~~~~~i~~~~~~~~~~~   77 (251)
                      ++|.|+|+ |.+|..++..++..| +.|++++++++.++...-.+....+  +.... +.. .++.+.+           
T Consensus         6 ~KI~IIGa-G~vG~~ia~~l~~~~~~~l~L~Di~~~~~~g~~lDl~~~~~~~~~~~~-i~~-~~d~~~l-----------   71 (319)
T PTZ00117          6 KKISMIGA-GQIGSTVALLILQKNLGDVVLYDVIKGVPQGKALDLKHFSTLVGSNIN-ILG-TNNYEDI-----------   71 (319)
T ss_pred             cEEEEECC-CHHHHHHHHHHHHCCCCeEEEEECCCccchhHHHHHhhhccccCCCeE-EEe-CCCHHHh-----------
Confidence            36899997 889999999999988 6899999987665433322222111  11111 111 1232221           


Q ss_pred             CCeeEEEEcCCCCCCCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCcc
Q 025509           78 HQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEG  143 (251)
Q Consensus        78 g~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~  143 (251)
                      ...|+||.++|....+. ++   -.+.+..|.    .+.+.+.+.+.+.    ++.+.++++|...
T Consensus        72 ~~ADiVVitag~~~~~g-~~---r~dll~~n~----~i~~~i~~~i~~~----~p~a~vivvsNP~  125 (319)
T PTZ00117         72 KDSDVVVITAGVQRKEE-MT---REDLLTING----KIMKSVAESVKKY----CPNAFVICVTNPL  125 (319)
T ss_pred             CCCCEEEECCCCCCCCC-CC---HHHHHHHHH----HHHHHHHHHHHHH----CCCeEEEEecChH
Confidence            26899999999754321 12   234455555    4566677776665    3567788887644

>TIGR02825 B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase

Probab=97.05  E-value=0.004  Score=53.66  Aligned_cols=77  Identities=16%  Similarity=0.281  Sum_probs=51.3

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      .+|||+|+++++|.++++.+...|++|+.+++++++.+.+. ++     +.+. +  .|..+.+...+.++.+.  .+++
T Consensus       140 ~~VLI~ga~g~vG~~aiqlAk~~G~~Vi~~~~s~~~~~~~~-~l-----Ga~~-v--i~~~~~~~~~~~~~~~~--~~gv  208 (325)
T TIGR02825       140 ETVMVNAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKVAYLK-KL-----GFDV-A--FNYKTVKSLEETLKKAS--PDGY  208 (325)
T ss_pred             CEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-Hc-----CCCE-E--EeccccccHHHHHHHhC--CCCe
Confidence            36999999999999999888888999999998876654442 22     3321 1  23333233444444432  2369


Q ss_pred             eEEEEcCC
Q 025509           81 NILINNAG   88 (251)
Q Consensus        81 d~lv~~ag   88 (251)
                      |+++.+.|
T Consensus       209 dvv~d~~G  216 (325)
T TIGR02825       209 DCYFDNVG  216 (325)
T ss_pred             EEEEECCC
Confidence            99999887

Leukotriene B4 12-hydroxydehydrogenase is an NADP-dependent enzyme of arachidonic acid metabolism, responsible for converting leukotriene B4 to the much less active metabolite 12-oxo-leukotriene B4. The BRENDA database lists leukotriene B4 12-hydroxydehydrogenase as one of the synonyms of 2-alkenal reductase (EC 1.3.1.74), while 1.3.1.48 is 15-oxoprostaglandin 13-reductase.

>cd01484 E1-2_like Ubiquitin activating enzyme (E1), repeat 2-like

Probab=97.05  E-value=0.007  Score=49.96  Aligned_cols=79  Identities=22%  Similarity=0.336  Sum_probs=50.6

Q ss_pred             EEEEECCCChhHHHHHHHHHHcCC-EEEEEecCch-------------------hHHHHHHHHHhhCCCCceEEEEecCC
Q 025509            2 DIVITGATSGIGTETARVLALRGV-HVVMGVRDIA-------------------AGKDVKETIVKEIPSAKVDAMELDLS   61 (251)
Q Consensus         2 ~vlItG~s~gIG~a~a~~l~~~G~-~Vi~~~r~~~-------------------~~~~~~~~~~~~~~~~~v~~~~~D~~   61 (251)
                      +|||.| .||+|.++++.|+..|. ++.+++.+.-                   +++-+.+.+.+..|..++..+..+++
T Consensus         1 kVlvvG-~GGlG~eilk~La~~Gvg~i~ivD~D~Ve~sNLnRQflf~~~dvGk~Ka~va~~~l~~~np~v~i~~~~~~i~   79 (234)
T cd01484           1 KVLLVG-AGGIGCELLKNLALMGFGQIHVIDMDTIDVSNLNRQFLFRPKDIGRPKSEVAAEAVNDRNPNCKVVPYQNKVG   79 (234)
T ss_pred             CEEEEC-CCHHHHHHHHHHHHcCCCeEEEEeCCEEcchhhccccCCChhhCChHHHHHHHHHHHHHCCCCEEEEEeccCC
Confidence            367776 67999999999999998 7888887632                   33444555556666666666666665


Q ss_pred             CHHHHHHHHHHHHhcCCCeeEEEEcC
Q 025509           62 SLASVRNFASEYNIQHHQLNILINNA   87 (251)
Q Consensus        62 ~~~~i~~~~~~~~~~~g~id~lv~~a   87 (251)
                      +.+....   +   -+.++|+||.+.
T Consensus        80 ~~~~~~~---~---f~~~~DvVi~a~   99 (234)
T cd01484          80 PEQDFND---T---FFEQFHIIVNAL   99 (234)
T ss_pred             hhhhchH---H---HHhCCCEEEECC
Confidence            4322211   1   112567777664

E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. A set of novel molecules with a structural similarity to Ub, called Ub-like proteins (Ubls), have similar conjugation cascades. In contrast to ubiquitin-E1, which is a single-chain protein with a weakly conserved two-fold repeat, many of the Ubls-E1are a heterodimer where each subunit corresponds to one half of a single-chain E1. This CD represents the family homologou

>TIGR01809 Shik-DH-AROM shikimate-5-dehydrogenase, fungal AROM-type

Probab=97.05  E-value=0.0034  Score=53.33  Aligned_cols=75  Identities=15%  Similarity=0.125  Sum_probs=51.4

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCC-EEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCC
Q 025509            1 MDIVITGATSGIGTETARVLALRGV-HVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQ   79 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~   79 (251)
                      |+++|.|+ ||.|++++..|++.|+ +|.++.|+.++++++.+.+...   ..+  ..  +...+++.       .....
T Consensus       126 k~vlvlGa-GGaarai~~aL~~~G~~~i~I~nRt~~ka~~La~~~~~~---~~~--~~--~~~~~~~~-------~~~~~  190 (282)
T TIGR01809       126 FRGLVIGA-GGTSRAAVYALASLGVTDITVINRNPDKLSRLVDLGVQV---GVI--TR--LEGDSGGL-------AIEKA  190 (282)
T ss_pred             ceEEEEcC-cHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhhhc---Ccc--ee--ccchhhhh-------hcccC
Confidence            46888865 8999999999999997 7999999998888887765321   111  11  11112221       11236


Q ss_pred             eeEEEEcCCCC
Q 025509           80 LNILINNAGIM   90 (251)
Q Consensus        80 id~lv~~ag~~   90 (251)
                      .|+|||+.+..
T Consensus       191 ~DiVInaTp~g  201 (282)
T TIGR01809       191 AEVLVSTVPAD  201 (282)
T ss_pred             CCEEEECCCCC
Confidence            89999998764

This model represents a clade of shikimate-5-dehydrogenases found in Corynebacterium, Mycobacteria and fungi. The fungal sequences are pentafunctional proteins known as AroM which contain the central five seven steps in the chorismate biosynthesis pathway. The Corynebacterium and Mycobacterial sequences represent the sole shikimate-5-dehydrogenases in species which otherwise have every enzyme of the chorismate biosynthesis pathway.

>PF12242 Eno-Rase_NADH_b: NAD(P)H binding domain of trans-2-enoyl-CoA reductase; PDB: 3ZU5_A 3ZU3_A 3ZU4_A 3ZU2_A 3S8M_A

Probab=97.04  E-value=0.00085  Score=44.55  Aligned_cols=33  Identities=18%  Similarity=0.268  Sum_probs=22.6

Q ss_pred             CEEEEECCCChhHHHHHHHHH-HcCCEEEEEecC
Q 025509            1 MDIVITGATSGIGTETARVLA-LRGVHVVMGVRD   33 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~-~~G~~Vi~~~r~   33 (251)
                      |+|||+|+|+|.|.|-...++ ..|++.+.+...
T Consensus        40 K~VLViGaStGyGLAsRIa~aFg~gA~TiGV~fE   73 (78)
T PF12242_consen   40 KKVLVIGASTGYGLASRIAAAFGAGADTIGVSFE   73 (78)
T ss_dssp             SEEEEES-SSHHHHHHHHHHHHCC--EEEEEE--
T ss_pred             ceEEEEecCCcccHHHHHHHHhcCCCCEEEEeec
Confidence            689999999999999555554 567888887764

>PRK02472 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=97.04  E-value=0.0015  Score=59.03  Aligned_cols=75  Identities=13%  Similarity=0.236  Sum_probs=49.8

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      |+++|||+++ +|.++|+.|++.|++|++.+++........+.+.+.    .+.+...+.  ...+   ..      ..+
T Consensus         6 k~v~v~G~g~-~G~s~a~~l~~~G~~V~~~d~~~~~~~~~~~~l~~~----g~~~~~~~~--~~~~---~~------~~~   69 (447)
T PRK02472          6 KKVLVLGLAK-SGYAAAKLLHKLGANVTVNDGKPFSENPEAQELLEE----GIKVICGSH--PLEL---LD------EDF   69 (447)
T ss_pred             CEEEEEeeCH-HHHHHHHHHHHCCCEEEEEcCCCccchhHHHHHHhc----CCEEEeCCC--CHHH---hc------CcC
Confidence            5799999986 999999999999999999998654433443444332    233332221  1111   11      148


Q ss_pred             eEEEEcCCCCC
Q 025509           81 NILINNAGIMG   91 (251)
Q Consensus        81 d~lv~~ag~~~   91 (251)
                      |+||+++|+..
T Consensus        70 d~vV~s~gi~~   80 (447)
T PRK02472         70 DLMVKNPGIPY   80 (447)
T ss_pred             CEEEECCCCCC
Confidence            99999999853

>TIGR02354 thiF_fam2 thiamine biosynthesis protein ThiF, family 2

Probab=97.02  E-value=0.0084  Score=48.29  Aligned_cols=32  Identities=28%  Similarity=0.469  Sum_probs=28.5

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCC-EEEEEecC
Q 025509            1 MDIVITGATSGIGTETARVLALRGV-HVVMGVRD   33 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~-~Vi~~~r~   33 (251)
                      ++|+|.|+ ||+|..+|..|++.|. ++++++++
T Consensus        22 ~~V~IvG~-GglGs~ia~~La~~Gvg~i~lvD~D   54 (200)
T TIGR02354        22 ATVAICGL-GGLGSNVAINLARAGIGKLILVDFD   54 (200)
T ss_pred             CcEEEECc-CHHHHHHHHHHHHcCCCEEEEECCC
Confidence            36888887 7899999999999998 79999887

Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with one the E. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the divergent clade of putative ThiF proteins such found in Campylobacter.

>cd05276 p53_inducible_oxidoreductase PIG3 p53-inducible quinone oxidoreductase

Probab=97.01  E-value=0.0071  Score=51.28  Aligned_cols=77  Identities=13%  Similarity=0.261  Sum_probs=52.1

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      ++++|+|+++++|.++++.+...|++|++++++.++.+.+ .++     +..   ...|..+.+....+.+.. . .+++
T Consensus       141 ~~vlv~g~~~~ig~~~~~~~~~~g~~v~~~~~~~~~~~~~-~~~-----g~~---~~~~~~~~~~~~~~~~~~-~-~~~~  209 (323)
T cd05276         141 ETVLIHGGASGVGTAAIQLAKALGARVIATAGSEEKLEAC-RAL-----GAD---VAINYRTEDFAEEVKEAT-G-GRGV  209 (323)
T ss_pred             CEEEEEcCcChHHHHHHHHHHHcCCEEEEEcCCHHHHHHH-HHc-----CCC---EEEeCCchhHHHHHHHHh-C-CCCe
Confidence            3689999999999999999999999999999886655443 222     221   223444433333333322 1 2479


Q ss_pred             eEEEEcCC
Q 025509           81 NILINNAG   88 (251)
Q Consensus        81 d~lv~~ag   88 (251)
                      |++++++|
T Consensus       210 d~vi~~~g  217 (323)
T cd05276         210 DVILDMVG  217 (323)
T ss_pred             EEEEECCc
Confidence            99999998

PIG3 p53-inducible quinone oxidoreductase, a medium chain dehydrogenase/reductase family member, acts in the apoptotic pathway. PIG3 reduces ortho-quinones, but its apoptotic activity has been attributed to oxidative stress generation, since overexpression of PIG3 accumulates reactive oxygen species. PIG3 resembles the MDR family member quinone reductases, which catalyze the reduction of quinone to hydroxyquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding

>cd05188 MDR Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=96.99  E-value=0.013  Score=48.44  Aligned_cols=76  Identities=14%  Similarity=0.180  Sum_probs=49.8

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      +++||+|+++ +|.++++.+...|.+|+++++++++.+.+ +.+     +.. .  ..|..+.+....+.   ....+++
T Consensus       136 ~~vli~g~~~-~G~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~-----g~~-~--~~~~~~~~~~~~~~---~~~~~~~  202 (271)
T cd05188         136 DTVLVLGAGG-VGLLAAQLAKAAGARVIVTDRSDEKLELA-KEL-----GAD-H--VIDYKEEDLEEELR---LTGGGGA  202 (271)
T ss_pred             CEEEEECCCH-HHHHHHHHHHHcCCeEEEEcCCHHHHHHH-HHh-----CCc-e--eccCCcCCHHHHHH---HhcCCCC
Confidence            3689999998 99999998888999999999987554433 211     211 1  12333333333333   2233579


Q ss_pred             eEEEEcCCC
Q 025509           81 NILINNAGI   89 (251)
Q Consensus        81 d~lv~~ag~   89 (251)
                      |+++++++.
T Consensus       203 d~vi~~~~~  211 (271)
T cd05188         203 DVVIDAVGG  211 (271)
T ss_pred             CEEEECCCC
Confidence            999999873

The medium chain reductase/dehydrogenases (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH) , quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydro

>COG0039 Mdh Malate/lactate dehydrogenases [Energy production and conversion]

Probab=96.98  E-value=0.013  Score=50.32  Aligned_cols=117  Identities=15%  Similarity=0.224  Sum_probs=73.5

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCC--EEEEEecCchhHHHHHHHHHhhCCCC-ceEEEEecCCCHHHHHHHHHHHHhcC
Q 025509            1 MDIVITGATSGIGTETARVLALRGV--HVVMGVRDIAAGKDVKETIVKEIPSA-KVDAMELDLSSLASVRNFASEYNIQH   77 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~--~Vi~~~r~~~~~~~~~~~~~~~~~~~-~v~~~~~D~~~~~~i~~~~~~~~~~~   77 (251)
                      +.|.|+|+ |+||.++|-.|+.++.  .+++++.+++.++.....+....+.. .-..+..| .+.+.+           
T Consensus         1 ~KVaviGa-G~VG~s~a~~l~~~~~~~el~LiDi~~~~~~G~a~DL~~~~~~~~~~~~i~~~-~~y~~~-----------   67 (313)
T COG0039           1 MKVAVIGA-GNVGSSLAFLLLLQGLGSELVLIDINEEKAEGVALDLSHAAAPLGSDVKITGD-GDYEDL-----------   67 (313)
T ss_pred             CeEEEECC-ChHHHHHHHHHhcccccceEEEEEcccccccchhcchhhcchhccCceEEecC-CChhhh-----------
Confidence            46899999 9999999999988764  79999999777776666665532211 11222222 222222           


Q ss_pred             CCeeEEEEcCCCCCCCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCc
Q 025509           78 HQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSE  142 (251)
Q Consensus        78 g~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~  142 (251)
                      ...|++|..||....+- ++   =.+.++.|..    +.+.+.+.+.+.    ++++.|+.++-.
T Consensus        68 ~~aDiVvitAG~prKpG-mt---R~DLl~~Na~----I~~~i~~~i~~~----~~d~ivlVvtNP  120 (313)
T COG0039          68 KGADIVVITAGVPRKPG-MT---RLDLLEKNAK----IVKDIAKAIAKY----APDAIVLVVTNP  120 (313)
T ss_pred             cCCCEEEEeCCCCCCCC-CC---HHHHHHhhHH----HHHHHHHHHHhh----CCCeEEEEecCc
Confidence            27899999999865443 22   2334555643    445555555554    245777777753

>PRK00258 aroE shikimate 5-dehydrogenase; Reviewed

Probab=96.97  E-value=0.002  Score=54.67  Aligned_cols=44  Identities=18%  Similarity=0.243  Sum_probs=38.5

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcC-CEEEEEecCchhHHHHHHHHH
Q 025509            1 MDIVITGATSGIGTETARVLALRG-VHVVMGVRDIAAGKDVKETIV   45 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G-~~Vi~~~r~~~~~~~~~~~~~   45 (251)
                      |+++|+|+ ||+|++++..|++.| .+|++++|+.++++++.+.+.
T Consensus       124 k~vlVlGa-Gg~a~ai~~aL~~~g~~~V~v~~R~~~~a~~l~~~~~  168 (278)
T PRK00258        124 KRILILGA-GGAARAVILPLLDLGVAEITIVNRTVERAEELAKLFG  168 (278)
T ss_pred             CEEEEEcC-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhh
Confidence            47899997 899999999999999 589999999888887776653

>PRK13940 glutamyl-tRNA reductase; Provisional

Probab=96.97  E-value=0.0041  Score=55.69  Aligned_cols=72  Identities=15%  Similarity=0.303  Sum_probs=50.6

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCC-EEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCC
Q 025509            1 MDIVITGATSGIGTETARVLALRGV-HVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQ   79 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~   79 (251)
                      ++++|.|+ ||+|+++++.|+..|+ +++++.|+.++++.+.+++     +. ..++     ..+++...       ...
T Consensus       182 kkvlviGa-G~~a~~va~~L~~~g~~~I~V~nRt~~ra~~La~~~-----~~-~~~~-----~~~~l~~~-------l~~  242 (414)
T PRK13940        182 KNVLIIGA-GQTGELLFRHVTALAPKQIMLANRTIEKAQKITSAF-----RN-ASAH-----YLSELPQL-------IKK  242 (414)
T ss_pred             CEEEEEcC-cHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHh-----cC-CeEe-----cHHHHHHH-------hcc
Confidence            47899988 9999999999999996 7999999988877766554     11 1111     12233222       236


Q ss_pred             eeEEEEcCCCCC
Q 025509           80 LNILINNAGIMG   91 (251)
Q Consensus        80 id~lv~~ag~~~   91 (251)
                      .|+||++.+...
T Consensus       243 aDiVI~aT~a~~  254 (414)
T PRK13940        243 ADIIIAAVNVLE  254 (414)
T ss_pred             CCEEEECcCCCC
Confidence            899999988543

>KOG1198 consensus Zinc-binding oxidoreductase [Energy production and conversion; General function prediction only]

Probab=96.97  E-value=0.0065  Score=53.17  Aligned_cols=77  Identities=14%  Similarity=0.271  Sum_probs=51.1

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      +.+||.||++|+|.+.++.....|+..+++.+++++. ++.+++     +..   ...|..+++-++. +++..  .+++
T Consensus       159 ~~vLv~ggsggVG~~aiQlAk~~~~~~v~t~~s~e~~-~l~k~l-----GAd---~vvdy~~~~~~e~-~kk~~--~~~~  226 (347)
T KOG1198|consen  159 KSVLVLGGSGGVGTAAIQLAKHAGAIKVVTACSKEKL-ELVKKL-----GAD---EVVDYKDENVVEL-IKKYT--GKGV  226 (347)
T ss_pred             CeEEEEeCCcHHHHHHHHHHHhcCCcEEEEEcccchH-HHHHHc-----CCc---EeecCCCHHHHHH-HHhhc--CCCc
Confidence            4799999999999999998888896555555555443 333333     221   2347777443333 33322  5689


Q ss_pred             eEEEEcCCC
Q 025509           81 NILINNAGI   89 (251)
Q Consensus        81 d~lv~~ag~   89 (251)
                      |+|+.|.|.
T Consensus       227 DvVlD~vg~  235 (347)
T KOG1198|consen  227 DVVLDCVGG  235 (347)
T ss_pred             cEEEECCCC
Confidence            999999995

>PLN02602 lactate dehydrogenase

Probab=96.95  E-value=0.029  Score=49.13  Aligned_cols=116  Identities=12%  Similarity=0.104  Sum_probs=74.7

Q ss_pred             EEEEECCCChhHHHHHHHHHHcCC--EEEEEecCchhHHHHHHHHHhhCC-CCceEEEEecCCCHHHHHHHHHHHHhcCC
Q 025509            2 DIVITGATSGIGTETARVLALRGV--HVVMGVRDIAAGKDVKETIVKEIP-SAKVDAMELDLSSLASVRNFASEYNIQHH   78 (251)
Q Consensus         2 ~vlItG~s~gIG~a~a~~l~~~G~--~Vi~~~r~~~~~~~~~~~~~~~~~-~~~v~~~~~D~~~~~~i~~~~~~~~~~~g   78 (251)
                      .|.|+|+ |.+|.++|-.|+..|.  .+++++.+++++.....++....+ .....+. . -.+++.       +    .
T Consensus        39 KI~IIGa-G~VG~~~a~~l~~~~l~~el~LiDi~~~~~~g~a~DL~~~~~~~~~~~i~-~-~~dy~~-------~----~  104 (350)
T PLN02602         39 KVSVVGV-GNVGMAIAQTILTQDLADELALVDVNPDKLRGEMLDLQHAAAFLPRTKIL-A-STDYAV-------T----A  104 (350)
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCCCchhhHHHHHHHhhhhcCCCCEEE-e-CCCHHH-------h----C
Confidence            6899996 9999999999998875  799999998888777777766432 1112222 1 112221       2    3


Q ss_pred             CeeEEEEcCCCCCCCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCcc
Q 025509           79 QLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEG  143 (251)
Q Consensus        79 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~  143 (251)
                      ..|++|.+||....+. ++   =.+.+..|    ..+++.+.+.+.+.    ++.+.+++++-..
T Consensus       105 daDiVVitAG~~~k~g-~t---R~dll~~N----~~I~~~i~~~I~~~----~p~~ivivvtNPv  157 (350)
T PLN02602        105 GSDLCIVTAGARQIPG-ES---RLNLLQRN----VALFRKIIPELAKY----SPDTILLIVSNPV  157 (350)
T ss_pred             CCCEEEECCCCCCCcC-CC---HHHHHHHH----HHHHHHHHHHHHHH----CCCeEEEEecCch
Confidence            7899999999754321 12   22334444    34556666666655    3567888888633

>TIGR00518 alaDH alanine dehydrogenase

Probab=96.93  E-value=0.009  Score=52.80  Aligned_cols=72  Identities=18%  Similarity=0.279  Sum_probs=51.0

Q ss_pred             EEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCee
Q 025509            2 DIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQLN   81 (251)
Q Consensus         2 ~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~id   81 (251)
                      +++|.|+ |.+|..+++.+...|++|++++|+..+++.+...+     +..   +..+..+.+.+.+.+       ...|
T Consensus       169 ~VlViGa-G~vG~~aa~~a~~lGa~V~v~d~~~~~~~~l~~~~-----g~~---v~~~~~~~~~l~~~l-------~~aD  232 (370)
T TIGR00518       169 DVTIIGG-GVVGTNAAKMANGLGATVTILDINIDRLRQLDAEF-----GGR---IHTRYSNAYEIEDAV-------KRAD  232 (370)
T ss_pred             eEEEEcC-CHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHhc-----Cce---eEeccCCHHHHHHHH-------ccCC
Confidence            4788877 79999999999999999999999877665544322     221   223455555554433       2579


Q ss_pred             EEEEcCCC
Q 025509           82 ILINNAGI   89 (251)
Q Consensus        82 ~lv~~ag~   89 (251)
                      ++|+++++
T Consensus       233 vVI~a~~~  240 (370)
T TIGR00518       233 LLIGAVLI  240 (370)
T ss_pred             EEEEcccc
Confidence            99999865

The family of known L-alanine dehydrogenases includes representatives from the Proteobacteria, Firmicutes, and Cyanobacteria, all with about 50 % identity or better. An outlier to this group in both sequence and gap pattern is the homolog from Helicobacter pylori, an epsilon division Proteobacteria, which must be considered a putative alanine dehydrogenase. Related proteins include saccharopine dehydrogenase and the N-terminal half of the NAD(P) transhydrogenase alpha subunit. All of these related proteins bind NAD and/or NADP.

>PLN02520 bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase

Probab=96.91  E-value=0.0019  Score=59.69  Aligned_cols=43  Identities=26%  Similarity=0.390  Sum_probs=37.4

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHH
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETI   44 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~   44 (251)
                      |+++|+|+ ||+|++++..|++.|++|+++.|+.++++++.+.+
T Consensus       380 k~vlIlGa-GGagrAia~~L~~~G~~V~i~nR~~e~a~~la~~l  422 (529)
T PLN02520        380 KLFVVIGA-GGAGKALAYGAKEKGARVVIANRTYERAKELADAV  422 (529)
T ss_pred             CEEEEECC-cHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHh
Confidence            47999999 59999999999999999999999987777766544

>cd00300 LDH_like L-lactate dehydrogenase-like enzymes

Probab=96.91  E-value=0.033  Score=47.78  Aligned_cols=115  Identities=20%  Similarity=0.175  Sum_probs=73.5

Q ss_pred             EEEECCCChhHHHHHHHHHHcC--CEEEEEecCchhHHHHHHHHHhhCCC-CceEEEEecCCCHHHHHHHHHHHHhcCCC
Q 025509            3 IVITGATSGIGTETARVLALRG--VHVVMGVRDIAAGKDVKETIVKEIPS-AKVDAMELDLSSLASVRNFASEYNIQHHQ   79 (251)
Q Consensus         3 vlItG~s~gIG~a~a~~l~~~G--~~Vi~~~r~~~~~~~~~~~~~~~~~~-~~v~~~~~D~~~~~~i~~~~~~~~~~~g~   79 (251)
                      +.|.|+ |++|.++|-.|+..|  .++++++++++++......+.+..+. ....+...  .+.+       .+    ..
T Consensus         1 i~iiGa-G~VG~~~a~~l~~~~~~~el~l~D~~~~~~~g~~~DL~~~~~~~~~~~i~~~--~~~~-------~l----~~   66 (300)
T cd00300           1 ITIIGA-GNVGAAVAFALIAKGLASELVLVDVNEEKAKGDALDLSHASAFLATGTIVRG--GDYA-------DA----AD   66 (300)
T ss_pred             CEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCccHHHHHHHhHHHhccccCCCeEEEC--CCHH-------Hh----CC
Confidence            357786 679999999999988  57999999998888887777664322 11222211  2222       22    27


Q ss_pred             eeEEEEcCCCCCCCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCcc
Q 025509           80 LNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEG  143 (251)
Q Consensus        80 id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~  143 (251)
                      .|++|.++|....+. ++   -.+.+..|    ..+++.+.+.+.+.    ++.+.++++|...
T Consensus        67 aDiVIitag~p~~~~-~~---R~~l~~~n----~~i~~~~~~~i~~~----~p~~~viv~sNP~  118 (300)
T cd00300          67 ADIVVITAGAPRKPG-ET---RLDLINRN----APILRSVITNLKKY----GPDAIILVVSNPV  118 (300)
T ss_pred             CCEEEEcCCCCCCCC-CC---HHHHHHHH----HHHHHHHHHHHHHh----CCCeEEEEccChH
Confidence            899999999743321 12   23334444    34556666666655    3578888888644

Members of this subfamily are tetrameric NAD-dependent 2-hydroxycarboxylate dehydrogenases including LDHs, L-2-hydroxyisocaproate dehydrogenases (L-HicDH), and LDH-like malate dehydrogenases (MDH). Dehydrogenases catalyze the conversion of carbonyl compounds to alcohols or amino acids. LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Vertebrate LDHs are non-allosteric, but some bacterial LDHs are activated by an allosteric effector such as fructose-1,6-bisphosphate. L-HicDH catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of prot

>cd00650 LDH_MDH_like NAD-dependent, lactate dehydrogenase-like, 2-hydroxycarboxylate dehydrogenase family

Probab=96.91  E-value=0.019  Score=48.17  Aligned_cols=77  Identities=18%  Similarity=0.221  Sum_probs=53.0

Q ss_pred             EEEECCCChhHHHHHHHHHHcC----CEEEEEecCchhHHHHHHHHHhhCCCC-ceEEEEecCCCHHHHHHHHHHHHhcC
Q 025509            3 IVITGATSGIGTETARVLALRG----VHVVMGVRDIAAGKDVKETIVKEIPSA-KVDAMELDLSSLASVRNFASEYNIQH   77 (251)
Q Consensus         3 vlItG~s~gIG~a~a~~l~~~G----~~Vi~~~r~~~~~~~~~~~~~~~~~~~-~v~~~~~D~~~~~~i~~~~~~~~~~~   77 (251)
                      +.|+|++|.+|..++..|+..|    .+|+++++++++++.....+++..... ...+.   .++  +..+       ..
T Consensus         1 I~IIGagG~vG~~ia~~l~~~~~~~~~el~L~D~~~~~l~~~~~dl~~~~~~~~~~~i~---~~~--d~~~-------~~   68 (263)
T cd00650           1 IAVIGAGGNVGPALAFGLADGSVLLAIELVLYDIDEEKLKGVAMDLQDAVEPLADIKVS---ITD--DPYE-------AF   68 (263)
T ss_pred             CEEECCCChHHHHHHHHHHhCCCCcceEEEEEeCCcccchHHHHHHHHhhhhccCcEEE---ECC--chHH-------Hh
Confidence            4689998899999999999988    689999999888877777775532111 11111   111  1111       12


Q ss_pred             CCeeEEEEcCCCCC
Q 025509           78 HQLNILINNAGIMG   91 (251)
Q Consensus        78 g~id~lv~~ag~~~   91 (251)
                      ...|++|..+|...
T Consensus        69 ~~aDiVv~t~~~~~   82 (263)
T cd00650          69 KDADVVIITAGVGR   82 (263)
T ss_pred             CCCCEEEECCCCCC
Confidence            37899999999654

Members of this family include ubiquitous enzymes like L-lactate dehydrogenases (LDH), L-2-hydroxyisocaproate dehydrogenases, and some malate dehydrogenases (MDH). LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH/MDH-like proteins are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains

>TIGR01772 MDH_euk_gproteo malate dehydrogenase, NAD-dependent

Probab=96.90  E-value=0.0094  Score=51.36  Aligned_cols=117  Identities=13%  Similarity=0.138  Sum_probs=70.5

Q ss_pred             EEEEECCCChhHHHHHHHHHHcCC--EEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCC
Q 025509            2 DIVITGATSGIGTETARVLALRGV--HVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQ   79 (251)
Q Consensus         2 ~vlItG~s~gIG~a~a~~l~~~G~--~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~   79 (251)
                      +|.|+|++|.+|.++|-.|+..+.  +++++++++  +......+....  ....+....-.+  +       ..+....
T Consensus         1 KV~IiGaaG~VG~~~a~~l~~~~~~~elvL~Di~~--a~g~a~DL~~~~--~~~~i~~~~~~~--~-------~~~~~~d   67 (312)
T TIGR01772         1 KVAVLGAAGGIGQPLSLLLKLQPYVSELSLYDIAG--AAGVAADLSHIP--TAASVKGFSGEE--G-------LENALKG   67 (312)
T ss_pred             CEEEECCCCHHHHHHHHHHHhCCCCcEEEEecCCC--CcEEEchhhcCC--cCceEEEecCCC--c-------hHHHcCC
Confidence            378999999999999999998875  799999876  222222232211  111111101000  0       1122347


Q ss_pred             eeEEEEcCCCCCCCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCcc
Q 025509           80 LNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEG  143 (251)
Q Consensus        80 id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~  143 (251)
                      .|++|.+||....+.    ++-.+.++.|+.    +++...+.+.+.    ++.+.++++|...
T Consensus        68 aDivvitaG~~~~~g----~~R~dll~~N~~----I~~~i~~~i~~~----~p~~iiivvsNPv  119 (312)
T TIGR01772        68 ADVVVIPAGVPRKPG----MTRDDLFNVNAG----IVKDLVAAVAES----CPKAMILVITNPV  119 (312)
T ss_pred             CCEEEEeCCCCCCCC----ccHHHHHHHhHH----HHHHHHHHHHHh----CCCeEEEEecCch
Confidence            999999999754321    123445666655    666677777665    3567888888744

Although malate dehydrogenases have in some cases been mistaken for lactate dehydrogenases due to the similarity of these two substrates and the apparent ease with which evolution can toggle these activities, critical residues have been identified which can discriminate between the two activities. At the time of the creation of this model no hits above the trusted cutoff contained critical residues typical of lactate dehydrogenases.

>cd05290 LDH_3 A subgroup of L-lactate dehydrogenases

Probab=96.88  E-value=0.049  Score=46.89  Aligned_cols=115  Identities=15%  Similarity=0.144  Sum_probs=75.6

Q ss_pred             EEEECCCChhHHHHHHHHHHcCC--EEEEEecCchhHHHHHHHHHhhCC--C-CceEEEEecCCCHHHHHHHHHHHHhcC
Q 025509            3 IVITGATSGIGTETARVLALRGV--HVVMGVRDIAAGKDVKETIVKEIP--S-AKVDAMELDLSSLASVRNFASEYNIQH   77 (251)
Q Consensus         3 vlItG~s~gIG~a~a~~l~~~G~--~Vi~~~r~~~~~~~~~~~~~~~~~--~-~~v~~~~~D~~~~~~i~~~~~~~~~~~   77 (251)
                      |.|.|+ |.+|.++|..|+.+|.  ++++++.++++++.....+....+  . ..+.+..   .+++.+           
T Consensus         2 i~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~~a~g~a~DL~~~~~~~~~~~~~i~~---~~y~~~-----------   66 (307)
T cd05290           2 LVVIGA-GHVGSAVLNYALALGLFSEIVLIDVNEGVAEGEALDFHHATALTYSTNTKIRA---GDYDDC-----------   66 (307)
T ss_pred             EEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCcchhhHHHHHHHhhhccCCCCCEEEEE---CCHHHh-----------
Confidence            678888 9999999999998875  799999998887777777766432  1 2344443   232222           


Q ss_pred             CCeeEEEEcCCCCCCCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCc
Q 025509           78 HQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSE  142 (251)
Q Consensus        78 g~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~  142 (251)
                      ...|++|.+||....+. ++.+ =.+.++.|    ..+++...+.+.+.    ++.+.++++|-.
T Consensus        67 ~~aDivvitaG~~~kpg-~tr~-R~dll~~N----~~I~~~i~~~i~~~----~p~~i~ivvsNP  121 (307)
T cd05290          67 ADADIIVITAGPSIDPG-NTDD-RLDLAQTN----AKIIREIMGNITKV----TKEAVIILITNP  121 (307)
T ss_pred             CCCCEEEECCCCCCCCC-CCch-HHHHHHHH----HHHHHHHHHHHHHh----CCCeEEEEecCc
Confidence            37899999999754322 2211 13345555    45667777777766    356777777753

L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of some bacterial LDHs from firmicutes, gammaproteobacteria, and actinobacteria. Vertebrate LDHs are non-allosteric, but some bacterial LDHs are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenase, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase

Probab=96.86  E-value=0.001  Score=53.66  Aligned_cols=41  Identities=17%  Similarity=0.223  Sum_probs=35.5

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHH
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKE   42 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~   42 (251)
                      |+++|+|.+ .+|+++|+.|.+.|++|++.+++++..++..+
T Consensus        29 k~v~I~G~G-~vG~~~A~~L~~~G~~Vvv~D~~~~~~~~~~~   69 (200)
T cd01075          29 KTVAVQGLG-KVGYKLAEHLLEEGAKLIVADINEEAVARAAE   69 (200)
T ss_pred             CEEEEECCC-HHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHH
Confidence            579999986 89999999999999999999998776666554

Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily inc

>cd08259 Zn_ADH5 Alcohol dehydrogenases of the MDR family

Probab=96.85  E-value=0.0072  Score=51.87  Aligned_cols=39  Identities=23%  Similarity=0.318  Sum_probs=33.8

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHH
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKD   39 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~   39 (251)
                      +++||+|+++++|.++++.+...|++|+.+.++.++.+.
T Consensus       164 ~~vlI~ga~g~vG~~~~~~a~~~g~~v~~~~~~~~~~~~  202 (332)
T cd08259         164 DTVLVTGAGGGVGIHAIQLAKALGARVIAVTRSPEKLKI  202 (332)
T ss_pred             CEEEEECCCCHHHHHHHHHHHHcCCeEEEEeCCHHHHHH
Confidence            368999999999999999999999999999887655443

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES.

>TIGR02355 moeB molybdopterin synthase sulfurylase MoeB

Probab=96.83  E-value=0.017  Score=47.90  Aligned_cols=78  Identities=18%  Similarity=0.372  Sum_probs=50.4

Q ss_pred             EEEEECCCChhHHHHHHHHHHcCC-EEEEEecCch-------------------hHHHHHHHHHhhCCCCceEEEEecCC
Q 025509            2 DIVITGATSGIGTETARVLALRGV-HVVMGVRDIA-------------------AGKDVKETIVKEIPSAKVDAMELDLS   61 (251)
Q Consensus         2 ~vlItG~s~gIG~a~a~~l~~~G~-~Vi~~~r~~~-------------------~~~~~~~~~~~~~~~~~v~~~~~D~~   61 (251)
                      +|+|.| .||+|..+++.|++.|. ++.+++.+.-                   +.+.+.+.+.+..|..++..+...++
T Consensus        26 ~VlvvG-~GglGs~va~~La~~Gvg~i~lvD~D~ve~sNL~RQ~l~~~~diG~~Ka~~a~~~l~~inp~v~i~~~~~~i~  104 (240)
T TIGR02355        26 RVLIVG-LGGLGCAASQYLAAAGVGNLTLLDFDTVSLSNLQRQVLHSDANIGQPKVESAKDALTQINPHIAINPINAKLD  104 (240)
T ss_pred             cEEEEC-cCHHHHHHHHHHHHcCCCEEEEEeCCcccccCcccceeeeHhhCCCcHHHHHHHHHHHHCCCcEEEEEeccCC
Confidence            467776 46999999999999997 7888876532                   34445556666666666666554443


Q ss_pred             CHHHHHHHHHHHHhcCCCeeEEEEcCC
Q 025509           62 SLASVRNFASEYNIQHHQLNILINNAG   88 (251)
Q Consensus        62 ~~~~i~~~~~~~~~~~g~id~lv~~ag   88 (251)
                      . +.+.++++       ..|+||.+..
T Consensus       105 ~-~~~~~~~~-------~~DlVvd~~D  123 (240)
T TIGR02355       105 D-AELAALIA-------EHDIVVDCTD  123 (240)
T ss_pred             H-HHHHHHhh-------cCCEEEEcCC
Confidence            2 33333322       5677777664

This model describes the molybdopterin biosynthesis protein MoeB in E. coli and related species. The enzyme covalently modifies the molybdopterin synthase MoaD by sulfurylation. This enzyme is closely related to ThiF, a thiamine biosynthesis enzyme that modifies ThiS by an analogous adenylation. Both MoeB and ThiF belong to the HesA/MoeB/ThiF family (pfam00899).

>PRK08223 hypothetical protein; Validated

Probab=96.82  E-value=0.012  Score=49.94  Aligned_cols=59  Identities=19%  Similarity=0.286  Sum_probs=40.8

Q ss_pred             EEEEECCCChhHHHHHHHHHHcCC-EEEEEecCch-------------------hHHHHHHHHHhhCCCCceEEEEecCC
Q 025509            2 DIVITGATSGIGTETARVLALRGV-HVVMGVRDIA-------------------AGKDVKETIVKEIPSAKVDAMELDLS   61 (251)
Q Consensus         2 ~vlItG~s~gIG~a~a~~l~~~G~-~Vi~~~r~~~-------------------~~~~~~~~~~~~~~~~~v~~~~~D~~   61 (251)
                      +|+|.|+ ||+|..+++.|+..|. ++.+++.+.-                   +.+.+.+.+.+..|..++..+...++
T Consensus        29 ~VlIvG~-GGLGs~va~~LA~aGVG~i~lvD~D~Ve~SNLnRQ~l~~~~diG~~Kve~a~~~l~~iNP~v~V~~~~~~l~  107 (287)
T PRK08223         29 RVAIAGL-GGVGGIHLLTLARLGIGKFTIADFDVFELRNFNRQAGAMMSTLGRPKAEVLAEMVRDINPELEIRAFPEGIG  107 (287)
T ss_pred             CEEEECC-CHHHHHHHHHHHHhCCCeEEEEeCCCcchhccccccCcChhHCCCcHHHHHHHHHHHHCCCCEEEEEecccC
Confidence            5788865 6999999999999998 8888887632                   33444555555555555555555554

>PRK06223 malate dehydrogenase; Reviewed

Probab=96.82  E-value=0.043  Score=47.12  Aligned_cols=117  Identities=19%  Similarity=0.219  Sum_probs=68.0

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCC-EEEEEecCchhHHHHHHHHHhhCC-C-CceEEEEecCCCHHHHHHHHHHHHhcC
Q 025509            1 MDIVITGATSGIGTETARVLALRGV-HVVMGVRDIAAGKDVKETIVKEIP-S-AKVDAMELDLSSLASVRNFASEYNIQH   77 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~-~-~~v~~~~~D~~~~~~i~~~~~~~~~~~   77 (251)
                      ++|.|.|+ |.+|..+|..++..|. +|++++++++.++.....+.+... . .... +.. .++.+       .+    
T Consensus         3 ~KI~VIGa-G~vG~~ia~~la~~~~~ev~L~D~~~~~~~~~~~dl~~~~~~~~~~~~-i~~-~~d~~-------~~----   68 (307)
T PRK06223          3 KKISIIGA-GNVGATLAHLLALKELGDVVLFDIVEGVPQGKALDIAEAAPVEGFDTK-ITG-TNDYE-------DI----   68 (307)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCeEEEEEECCCchhHHHHHHHHhhhhhcCCCcE-EEe-CCCHH-------HH----
Confidence            46889998 8999999999999875 999999988776554433333211 1 1111 111 12221       11    


Q ss_pred             CCeeEEEEcCCCCCCCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCcc
Q 025509           78 HQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEG  143 (251)
Q Consensus        78 g~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~  143 (251)
                      ...|++|.++|...... .+   -.+.+.-|.    .+.+.+.+.+.+.    .+.+.+++++...
T Consensus        69 ~~aDiVii~~~~p~~~~-~~---r~~~~~~n~----~i~~~i~~~i~~~----~~~~~viv~tNP~  122 (307)
T PRK06223         69 AGSDVVVITAGVPRKPG-MS---RDDLLGINA----KIMKDVAEGIKKY----APDAIVIVVTNPV  122 (307)
T ss_pred             CCCCEEEECCCCCCCcC-CC---HHHHHHHHH----HHHHHHHHHHHHH----CCCeEEEEecCcH
Confidence            27899999999643221 11   223333343    4555555565554    2356677776543

>cd01485 E1-1_like Ubiquitin activating enzyme (E1), repeat 1-like

Probab=96.80  E-value=0.021  Score=45.94  Aligned_cols=78  Identities=21%  Similarity=0.368  Sum_probs=49.9

Q ss_pred             EEEEECCCChhHHHHHHHHHHcCC-EEEEEecCch---------------------hHHHHHHHHHhhCCCCceEEEEec
Q 025509            2 DIVITGATSGIGTETARVLALRGV-HVVMGVRDIA---------------------AGKDVKETIVKEIPSAKVDAMELD   59 (251)
Q Consensus         2 ~vlItG~s~gIG~a~a~~l~~~G~-~Vi~~~r~~~---------------------~~~~~~~~~~~~~~~~~v~~~~~D   59 (251)
                      +|+|.|++ |+|.++++.|+..|. ++.+++.+.-                     +.+.+.+.+++..|..++..+..+
T Consensus        21 ~VlviG~g-glGsevak~L~~~GVg~i~lvD~d~ve~snl~rq~~~~~~~~~iG~~Ka~~~~~~L~~lNp~v~i~~~~~~   99 (198)
T cd01485          21 KVLIIGAG-ALGAEIAKNLVLAGIDSITIVDHRLVSTEDLGSNFFLDAEVSNSGMNRAAASYEFLQELNPNVKLSIVEED   99 (198)
T ss_pred             cEEEECCC-HHHHHHHHHHHHcCCCEEEEEECCcCChhcCcccEecccchhhcCchHHHHHHHHHHHHCCCCEEEEEecc
Confidence            57888766 599999999999998 6888875521                     233445556666666666666655


Q ss_pred             CCC-HHHHHHHHHHHHhcCCCeeEEEEcC
Q 025509           60 LSS-LASVRNFASEYNIQHHQLNILINNA   87 (251)
Q Consensus        60 ~~~-~~~i~~~~~~~~~~~g~id~lv~~a   87 (251)
                      +.+ .+.....+       ..+|++|.+.
T Consensus       100 ~~~~~~~~~~~~-------~~~dvVi~~~  121 (198)
T cd01485         100 SLSNDSNIEEYL-------QKFTLVIATE  121 (198)
T ss_pred             cccchhhHHHHH-------hCCCEEEECC
Confidence            542 22222222       2567777664

E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. A set of novel molecules with a structural similarity to Ub, called Ub-like proteins (Ubls), have similar conjugation cascades. In contrast to ubiquitin-E1, which is a single-chain protein with a weakly conserved two-fold repeat, many of the Ubls-E1are a heterodimer where each subunit corresponds to one half of a single-chain E1. This CD represents the family homol

>PTZ00082 L-lactate dehydrogenase; Provisional

Probab=96.77  E-value=0.068  Score=46.31  Aligned_cols=121  Identities=15%  Similarity=0.162  Sum_probs=71.6

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCC-EEEEEecCchhHHHHHHHHHhh--CCCCceEEEEecCCCHHHHHHHHHHHHhcC
Q 025509            1 MDIVITGATSGIGTETARVLALRGV-HVVMGVRDIAAGKDVKETIVKE--IPSAKVDAMELDLSSLASVRNFASEYNIQH   77 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~-~Vi~~~r~~~~~~~~~~~~~~~--~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~   77 (251)
                      ++|.|+| +|.+|..+|..++..|. .|++++.+++.+....-.+...  ..+....+..  .+|.+       .+    
T Consensus         7 ~KI~IIG-aG~vG~~ia~~la~~gl~~i~LvDi~~~~~~~~~ld~~~~~~~~~~~~~I~~--~~d~~-------~l----   72 (321)
T PTZ00082          7 RKISLIG-SGNIGGVMAYLIVLKNLGDVVLFDIVKNIPQGKALDISHSNVIAGSNSKVIG--TNNYE-------DI----   72 (321)
T ss_pred             CEEEEEC-CCHHHHHHHHHHHhCCCCeEEEEeCCCchhhHHHHHHHhhhhccCCCeEEEE--CCCHH-------Hh----
Confidence            3688999 58899999999999995 8999999987643222222111  1111222221  12322       12    


Q ss_pred             CCeeEEEEcCCCCCCCCc--CCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccc
Q 025509           78 HQLNILINNAGIMGTPFM--LSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGH  144 (251)
Q Consensus        78 g~id~lv~~ag~~~~~~~--~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~  144 (251)
                      ...|+||.++|....+..  .+++ -.+.+..|+    .+.+.+.+.+.+.    ++.+.++++|....
T Consensus        73 ~~aDiVI~tag~~~~~~~~~~~~~-r~~~l~~n~----~i~~~i~~~i~~~----~p~a~~iv~sNP~d  132 (321)
T PTZ00082         73 AGSDVVIVTAGLTKRPGKSDKEWN-RDDLLPLNA----KIMDEVAEGIKKY----CPNAFVIVITNPLD  132 (321)
T ss_pred             CCCCEEEECCCCCCCCCCCcCCCC-HHHHHHHHH----HHHHHHHHHHHHH----CCCeEEEEecCcHH
Confidence            278999999997543211  1112 233455553    4566777777665    34667888886543

>PLN00112 malate dehydrogenase (NADP); Provisional

Probab=96.77  E-value=0.031  Score=50.36  Aligned_cols=114  Identities=12%  Similarity=0.086  Sum_probs=76.5

Q ss_pred             EEEEECCCChhHHHHHHHHHHc-------CC--EEEEEecCchhHHHHHHHHHhhC-CC-CceEEEEecCCCHHHHHHHH
Q 025509            2 DIVITGATSGIGTETARVLALR-------GV--HVVMGVRDIAAGKDVKETIVKEI-PS-AKVDAMELDLSSLASVRNFA   70 (251)
Q Consensus         2 ~vlItG~s~gIG~a~a~~l~~~-------G~--~Vi~~~r~~~~~~~~~~~~~~~~-~~-~~v~~~~~D~~~~~~i~~~~   70 (251)
                      +|.|+|++|.+|.++|-.|+..       |.  +++++++++++++...-++.+.. +- .++.+ ..  .+++.     
T Consensus       102 KV~IIGAaG~VG~~~A~~L~~~~v~g~~~~i~~eLvliD~~~~~a~G~amDL~daa~~~~~~v~i-~~--~~ye~-----  173 (444)
T PLN00112        102 NVAVSGAAGMISNHLLFKLASGEVFGPDQPIALKLLGSERSKQALEGVAMELEDSLYPLLREVSI-GI--DPYEV-----  173 (444)
T ss_pred             EEEEECCCcHHHHHHHHHHHhcccccCCCCcccEEEEEcCCcchhHHHHHHHHHhhhhhcCceEE-ec--CCHHH-----
Confidence            4899999999999999999988       65  79999999999888888887643 21 11211 11  23222     


Q ss_pred             HHHHhcCCCeeEEEEcCCCCCCCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHH-hhccCCCCceEEEEcC
Q 025509           71 SEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKK-TARKSGGEGRIINVSS  141 (251)
Q Consensus        71 ~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~~~~~~~g~iv~vsS  141 (251)
                            +...|++|..||....+.    ++-.+.++.|.    .+++...+.+.+ .    ++.+.||++|.
T Consensus       174 ------~kdaDiVVitAG~prkpG----~tR~dLl~~N~----~I~k~i~~~I~~~a----~p~~ivIVVsN  227 (444)
T PLN00112        174 ------FQDAEWALLIGAKPRGPG----MERADLLDING----QIFAEQGKALNEVA----SRNVKVIVVGN  227 (444)
T ss_pred             ------hCcCCEEEECCCCCCCCC----CCHHHHHHHHH----HHHHHHHHHHHHhc----CCCeEEEEcCC
Confidence                  237899999999754321    22344566664    445555666655 2    24678888885

>cd01488 Uba3_RUB Ubiquitin activating enzyme (E1) subunit UBA3

Probab=96.75  E-value=0.014  Score=49.74  Aligned_cols=76  Identities=22%  Similarity=0.350  Sum_probs=53.1

Q ss_pred             EEEEECCCChhHHHHHHHHHHcCC-EEEEEecCc-------------------hhHHHHHHHHHhhCCCCceEEEEecCC
Q 025509            2 DIVITGATSGIGTETARVLALRGV-HVVMGVRDI-------------------AAGKDVKETIVKEIPSAKVDAMELDLS   61 (251)
Q Consensus         2 ~vlItG~s~gIG~a~a~~l~~~G~-~Vi~~~r~~-------------------~~~~~~~~~~~~~~~~~~v~~~~~D~~   61 (251)
                      +|||.| .||+|.++++.|+..|. ++.+++.+.                   .+++-+.+.+.+..|..++..+..++.
T Consensus         1 kVlVVG-aGGlG~eilknLal~Gvg~I~IvD~D~Ve~SNLnRQfLf~~~dIGk~KAevaa~~l~~~np~v~I~~~~~~i~   79 (291)
T cd01488           1 KILVIG-AGGLGCELLKNLALSGFRNIHVIDMDTIDVSNLNRQFLFREKDIGKPKAEVAAKFVNDRVPGVNVTPHFGKIQ   79 (291)
T ss_pred             CEEEEC-CCHHHHHHHHHHHHcCCCeEEEECCCEecccccCcCcccChHHcchHHHHHHHHHHHHHCCCCEEEEEecccC
Confidence            377887 67999999999999998 788887542                   245555666667777777777777776


Q ss_pred             CHHHHHHHHHHHHhcCCCeeEEEEcC
Q 025509           62 SLASVRNFASEYNIQHHQLNILINNA   87 (251)
Q Consensus        62 ~~~~i~~~~~~~~~~~g~id~lv~~a   87 (251)
                      +.+  ..+       +..+|+||.+.
T Consensus        80 ~~~--~~f-------~~~fdvVi~al   96 (291)
T cd01488          80 DKD--EEF-------YRQFNIIICGL   96 (291)
T ss_pred             chh--HHH-------hcCCCEEEECC
Confidence            432  111       23678887764

UBA3 is part of the heterodimeric activating enzyme (E1), specific for the Rub family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins. consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin(-like) by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by Rub family of ubiquitin-like proteins (Ublps) activates SCF ubiquitin ligases and is involved in cell cycle control, signaling and embryogenesis. UBA3 contains both the nucleotide-binding motif involved in adenylation and the catalytic cysteine involved in the thioester intermediate and Ublp transfer to E2.

>PRK05600 thiamine biosynthesis protein ThiF; Validated

Probab=96.74  E-value=0.019  Score=50.70  Aligned_cols=59  Identities=24%  Similarity=0.369  Sum_probs=43.6

Q ss_pred             EEEEECCCChhHHHHHHHHHHcCC-EEEEEecC-------------------chhHHHHHHHHHhhCCCCceEEEEecCC
Q 025509            2 DIVITGATSGIGTETARVLALRGV-HVVMGVRD-------------------IAAGKDVKETIVKEIPSAKVDAMELDLS   61 (251)
Q Consensus         2 ~vlItG~s~gIG~a~a~~l~~~G~-~Vi~~~r~-------------------~~~~~~~~~~~~~~~~~~~v~~~~~D~~   61 (251)
                      +|+|.|+ ||+|..+++.|+..|. ++.+++.+                   ..+.+.+.+.+.+..|..++..+...++
T Consensus        43 ~VliiG~-GglG~~v~~~La~~Gvg~i~ivD~D~ve~sNL~RQ~l~~~~diG~~Ka~~~~~~l~~~np~v~i~~~~~~i~  121 (370)
T PRK05600         43 RVLVIGA-GGLGCPAMQSLASAGVGTITLIDDDTVDVSNIHRQILFGASDVGRPKVEVAAERLKEIQPDIRVNALRERLT  121 (370)
T ss_pred             cEEEECC-CHHHHHHHHHHHHcCCCEEEEEeCCEEccccccccccCChhHCCCHHHHHHHHHHHHHCCCCeeEEeeeecC
Confidence            5778865 6999999999999997 89998876                   2345666666777666666666655553

>cd01492 Aos1_SUMO Ubiquitin activating enzyme (E1) subunit Aos1

Probab=96.72  E-value=0.019  Score=46.11  Aligned_cols=76  Identities=22%  Similarity=0.357  Sum_probs=51.2

Q ss_pred             EEEEECCCChhHHHHHHHHHHcCC-EEEEEecCc-------------------hhHHHHHHHHHhhCCCCceEEEEecCC
Q 025509            2 DIVITGATSGIGTETARVLALRGV-HVVMGVRDI-------------------AAGKDVKETIVKEIPSAKVDAMELDLS   61 (251)
Q Consensus         2 ~vlItG~s~gIG~a~a~~l~~~G~-~Vi~~~r~~-------------------~~~~~~~~~~~~~~~~~~v~~~~~D~~   61 (251)
                      +|+|.|+ +|+|.++++.|+..|. ++.+++.+.                   .+.+.+.+.+++..|...+..+...++
T Consensus        23 ~VlIiG~-gglG~evak~La~~GVg~i~lvD~d~ve~snL~rqfl~~~~diG~~Ka~a~~~~L~~lNp~v~i~~~~~~~~  101 (197)
T cd01492          23 RILLIGL-KGLGAEIAKNLVLSGIGSLTILDDRTVTEEDLGAQFLIPAEDLGQNRAEASLERLRALNPRVKVSVDTDDIS  101 (197)
T ss_pred             cEEEEcC-CHHHHHHHHHHHHcCCCEEEEEECCcccHhhCCCCccccHHHcCchHHHHHHHHHHHHCCCCEEEEEecCcc
Confidence            5788874 5699999999999998 688887541                   234555666777777666776665554


Q ss_pred             CHHHHHHHHHHHHhcCCCeeEEEEcC
Q 025509           62 SLASVRNFASEYNIQHHQLNILINNA   87 (251)
Q Consensus        62 ~~~~i~~~~~~~~~~~g~id~lv~~a   87 (251)
                      +  ...+.+       .++|++|.+.
T Consensus       102 ~--~~~~~~-------~~~dvVi~~~  118 (197)
T cd01492         102 E--KPEEFF-------SQFDVVVATE  118 (197)
T ss_pred             c--cHHHHH-------hCCCEEEECC
Confidence            2  112222       2678888765

Aos1 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. Aos1 contains part of the adenylation domain.

>PRK08328 hypothetical protein; Provisional

Probab=96.71  E-value=0.027  Score=46.41  Aligned_cols=32  Identities=25%  Similarity=0.486  Sum_probs=26.8

Q ss_pred             EEEEECCCChhHHHHHHHHHHcCC-EEEEEecCc
Q 025509            2 DIVITGATSGIGTETARVLALRGV-HVVMGVRDI   34 (251)
Q Consensus         2 ~vlItG~s~gIG~a~a~~l~~~G~-~Vi~~~r~~   34 (251)
                      +|+|.|+ ||+|.++++.|++.|. ++.+++.+.
T Consensus        29 ~VlIiG~-GGlGs~ia~~La~~Gvg~i~lvD~D~   61 (231)
T PRK08328         29 KVAVVGV-GGLGSPVAYYLAAAGVGRILLIDEQT   61 (231)
T ss_pred             cEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCc
Confidence            5777765 5999999999999998 788888653

>PRK08655 prephenate dehydrogenase; Provisional

Probab=96.71  E-value=0.02  Score=51.80  Aligned_cols=41  Identities=41%  Similarity=0.601  Sum_probs=35.6

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHH
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVK   41 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~   41 (251)
                      |++.|+||.|.+|.++++.|.+.|++|++.+|++....+..
T Consensus         1 MkI~IIGG~G~mG~slA~~L~~~G~~V~v~~r~~~~~~~~a   41 (437)
T PRK08655          1 MKISIIGGTGGLGKWFARFLKEKGFEVIVTGRDPKKGKEVA   41 (437)
T ss_pred             CEEEEEecCCHHHHHHHHHHHHCCCEEEEEECChHHHHHHH
Confidence            57999999999999999999999999999999876654433

>KOG1197 consensus Predicted quinone oxidoreductase [Energy production and conversion; General function prediction only]

Probab=96.70  E-value=0.11  Score=43.03  Aligned_cols=156  Identities=13%  Similarity=0.243  Sum_probs=95.9

Q ss_pred             EEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCee
Q 025509            2 DIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQLN   81 (251)
Q Consensus         2 ~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~id   81 (251)
                      +|||--|+||+|..+++.+-..|.++|.+..+.++.+.+++       ++ ++ ...|.+..+-+.+ +.++- ...++|
T Consensus       149 tVlvhaAAGGVGlll~Ql~ra~~a~tI~~asTaeK~~~ake-------nG-~~-h~I~y~~eD~v~~-V~kiT-ngKGVd  217 (336)
T KOG1197|consen  149 TVLVHAAAGGVGLLLCQLLRAVGAHTIATASTAEKHEIAKE-------NG-AE-HPIDYSTEDYVDE-VKKIT-NGKGVD  217 (336)
T ss_pred             EEEEEeccccHHHHHHHHHHhcCcEEEEEeccHHHHHHHHh-------cC-Cc-ceeeccchhHHHH-HHhcc-CCCCce
Confidence            58999999999999999999999999999888777665544       11 21 2245555443333 33332 234799


Q ss_pred             EEEEcCCCCCCCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccccCCCC-
Q 025509           82 ILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDP-  160 (251)
Q Consensus        82 ~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~-  160 (251)
                      ++....|.         +.+...+               ..++       +.|.+|.++-.++...   ..+|+.+... 
T Consensus       218 ~vyDsvG~---------dt~~~sl---------------~~Lk-------~~G~mVSfG~asgl~~---p~~l~~ls~k~  263 (336)
T KOG1197|consen  218 AVYDSVGK---------DTFAKSL---------------AALK-------PMGKMVSFGNASGLID---PIPLNQLSPKA  263 (336)
T ss_pred             eeeccccc---------hhhHHHH---------------HHhc-------cCceEEEeccccCCCC---CeehhhcChhh
Confidence            99888774         2222211               1332       4689999887666542   2233222211 


Q ss_pred             --CCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCC
Q 025509          161 --SGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPG  202 (251)
Q Consensus       161 --~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg  202 (251)
                        --.|....|-....-+...+-.+-..+.....+++|++++|-
T Consensus       264 l~lvrpsl~gYi~g~~el~~~v~rl~alvnsg~lk~~I~~~ypl  307 (336)
T KOG1197|consen  264 LQLVRPSLLGYIDGEVELVSYVARLFALVNSGHLKIHIDHVYPL  307 (336)
T ss_pred             hhhccHhhhcccCCHHHHHHHHHHHHHHhhcCccceeeeeecch
Confidence              011344567777777766665555555555567999999884

>PRK14968 putative methyltransferase; Provisional

Probab=96.69  E-value=0.046  Score=42.99  Aligned_cols=76  Identities=21%  Similarity=0.149  Sum_probs=51.1

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCC-ceEEEEecCCCHHHHHHHHHHHHhcCCC
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSA-KVDAMELDLSSLASVRNFASEYNIQHHQ   79 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~-~v~~~~~D~~~~~~i~~~~~~~~~~~g~   79 (251)
                      +++|-.|++.|.   ++..+++.+.+|+.+++++...+.+.+.+....... .+.++.+|+.+.         +.+  ..
T Consensus        25 ~~vLd~G~G~G~---~~~~l~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~---------~~~--~~   90 (188)
T PRK14968         25 DRVLEVGTGSGI---VAIVAAKNGKKVVGVDINPYAVECAKCNAKLNNIRNNGVEVIRSDLFEP---------FRG--DK   90 (188)
T ss_pred             CEEEEEccccCH---HHHHHHhhcceEEEEECCHHHHHHHHHHHHHcCCCCcceEEEecccccc---------ccc--cC
Confidence            357888887666   555555568899999999877777766665432221 277888887441         111  26


Q ss_pred             eeEEEEcCCCC
Q 025509           80 LNILINNAGIM   90 (251)
Q Consensus        80 id~lv~~ag~~   90 (251)
                      +|.++.|....
T Consensus        91 ~d~vi~n~p~~  101 (188)
T PRK14968         91 FDVILFNPPYL  101 (188)
T ss_pred             ceEEEECCCcC
Confidence            89999998753

>PRK04148 hypothetical protein; Provisional

Probab=96.67  E-value=0.017  Score=43.25  Aligned_cols=52  Identities=23%  Similarity=0.153  Sum_probs=40.6

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCC
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSS   62 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~   62 (251)
                      +++++.|.+  -|.++|..|++.|++|+.++.++...+.+.+        ..+.++..|+.+
T Consensus        18 ~kileIG~G--fG~~vA~~L~~~G~~ViaIDi~~~aV~~a~~--------~~~~~v~dDlf~   69 (134)
T PRK04148         18 KKIVELGIG--FYFKVAKKLKESGFDVIVIDINEKAVEKAKK--------LGLNAFVDDLFN   69 (134)
T ss_pred             CEEEEEEec--CCHHHHHHHHHCCCEEEEEECCHHHHHHHHH--------hCCeEEECcCCC
Confidence            358899887  7888999999999999999999886555433        236777777764

>cd05292 LDH_2 A subgroup of L-lactate dehydrogenases

Probab=96.67  E-value=0.09  Score=45.27  Aligned_cols=115  Identities=19%  Similarity=0.259  Sum_probs=70.4

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcC--CEEEEEecCchhHHHHHHHHHhhCC-CCceEEEEecCCCHHHHHHHHHHHHhcC
Q 025509            1 MDIVITGATSGIGTETARVLALRG--VHVVMGVRDIAAGKDVKETIVKEIP-SAKVDAMELDLSSLASVRNFASEYNIQH   77 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G--~~Vi~~~r~~~~~~~~~~~~~~~~~-~~~v~~~~~D~~~~~~i~~~~~~~~~~~   77 (251)
                      |.|.|.|+ |.+|.++|..|+.+|  ..|+++++++++++.....+....+ ........   .+.+       .    .
T Consensus         1 mkI~IIGa-G~VG~~~a~~l~~~g~~~ev~l~D~~~~~~~g~a~dl~~~~~~~~~~~i~~---~d~~-------~----l   65 (308)
T cd05292           1 MKVAIVGA-GFVGSTTAYALLLRGLASEIVLVDINKAKAEGEAMDLAHGTPFVKPVRIYA---GDYA-------D----C   65 (308)
T ss_pred             CEEEEECC-CHHHHHHHHHHHHcCCCCEEEEEECCchhhhhHHHHHHccccccCCeEEee---CCHH-------H----h
Confidence            46889998 899999999999999  4899999998776654444443211 11122111   2221       1    2


Q ss_pred             CCeeEEEEcCCCCCCCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCc
Q 025509           78 HQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSE  142 (251)
Q Consensus        78 g~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~  142 (251)
                      ...|++|.++|.....    .++..+.+..|.    .+.+.+.+.+.+.    ++.|.+++++..
T Consensus        66 ~~aDiViita~~~~~~----~~~r~dl~~~n~----~i~~~~~~~l~~~----~~~giiiv~tNP  118 (308)
T cd05292          66 KGADVVVITAGANQKP----GETRLDLLKRNV----AIFKEIIPQILKY----APDAILLVVTNP  118 (308)
T ss_pred             CCCCEEEEccCCCCCC----CCCHHHHHHHHH----HHHHHHHHHHHHH----CCCeEEEEecCc
Confidence            3789999999964322    112233344443    4455555555554    346788888753

L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed predominantly of bacterial LDHs and a few fungal LDHs. Bacterial LDHs may be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PF02254 TrkA_N: TrkA-N domain; InterPro: IPR003148 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus

Probab=96.66  E-value=0.014  Score=42.26  Aligned_cols=71  Identities=23%  Similarity=0.264  Sum_probs=52.9

Q ss_pred             EEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCeeE
Q 025509            3 IVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQLNI   82 (251)
Q Consensus         3 vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~id~   82 (251)
                      |+|.|.+ .+|..+++.|.+.+.+|++++++++..++..+        ..+.++..|.++++.++++-      ....+.
T Consensus         1 vvI~G~g-~~~~~i~~~L~~~~~~vvvid~d~~~~~~~~~--------~~~~~i~gd~~~~~~l~~a~------i~~a~~   65 (116)
T PF02254_consen    1 VVIIGYG-RIGREIAEQLKEGGIDVVVIDRDPERVEELRE--------EGVEVIYGDATDPEVLERAG------IEKADA   65 (116)
T ss_dssp             EEEES-S-HHHHHHHHHHHHTTSEEEEEESSHHHHHHHHH--------TTSEEEES-TTSHHHHHHTT------GGCESE
T ss_pred             eEEEcCC-HHHHHHHHHHHhCCCEEEEEECCcHHHHHHHh--------cccccccccchhhhHHhhcC------ccccCE
Confidence            5677774 79999999999977799999999877665543        23788999999988877531      126778


Q ss_pred             EEEcCC
Q 025509           83 LINNAG   88 (251)
Q Consensus        83 lv~~ag   88 (251)
                      +|....
T Consensus        66 vv~~~~   71 (116)
T PF02254_consen   66 VVILTD   71 (116)
T ss_dssp             EEEESS
T ss_pred             EEEccC
Confidence            877765

The domain is prevalent among prokaryotic K+ channels, and also found in eukaryotic, high-conductance Ca2+-activated K+ channels (BK channels) [, , ]. Largely involved in redox-linked regulation of potassium channels, the N-terminal part of the RCK domain is predicted to be an active dehydrogenase at least in some cases []. Some have a conserved sequence motif (G-x-G-x-x-G-x(n)-[DE]) for NAD+ binding [], but others do not, reflecting the diversity of ligands for RCK domains. The C-terminal part is less conserved, being absent in some channels, such as the kefC antiporter from Escherichia coli. It is predicted to bind unidentified ligands and to regulate sulphate, sodium and other transporters. The X-ray structure of several RCK domains has been solved [, , ]. It reveals an alpha-beta fold similar to dehydrogenase enzymes. The domain forms a homodimer, producing a cleft between two lobes. It has a composite structure, with an N-terminal (RCK-N), and a C-terminal (RCK-C) subdomain. The RCK-N subdomain forms a Rossmann fold with two alpha helices on one side of a six stranded parallel beta sheet and three alpha helices on the other side. The RCK-C subdomain is an all-beta-strand fold. It forms an extention of the dimer interface and further stabilises the RCK homodimer [, , ]. Ca2+ is a ligand that opens the channel in a concentration-dependent manner. Two Ca2+ ions are located at the base of a cleft between two RCK domains, coordinated by the carboxylate groups of two glutamate residues, and by an aspartate residue [, , ]. RCK domains occur in at least five different contexts: As a single domain on the C terminus of some K+ channels (for example, many prokaryotic K+ channels). As two tandem RCK domains on the C terminus of some transporters that form gating rings (for example, eukaryotic BK channels). The gating ring has an arrangement of eight identical RCK domains, one from each of the four pore-forming subunits and four from the intracellular solution. As two domains, one at the N terminus and another at the C terminus of transporter (for example, the prokaryotic trk system potassium uptake protein A). As a soluble protein (not part of a K+ channel) consisting of two tandem RCK domains. As a soluble protein consisting of a single RCK domain. This entry represents the N-terminal subdomain of RCK.; GO: 0006813 potassium ion transport; PDB: 3L4B_E 1LSS_C 3LLV_A 2FY8_D 2AEF_A 1LNQ_E 3RBX_C 3KXD_A 2AEJ_A 3RBZ_A ....

>TIGR01759 MalateDH-SF1 malate dehydrogenase

Probab=96.66  E-value=0.053  Score=46.99  Aligned_cols=114  Identities=13%  Similarity=0.041  Sum_probs=70.5

Q ss_pred             EEEEECCCChhHHHHHHHHHHcCC-------EEEEEecCc--hhHHHHHHHHHhhC-CC-CceEEEEecCCCHHHHHHHH
Q 025509            2 DIVITGATSGIGTETARVLALRGV-------HVVMGVRDI--AAGKDVKETIVKEI-PS-AKVDAMELDLSSLASVRNFA   70 (251)
Q Consensus         2 ~vlItG~s~gIG~a~a~~l~~~G~-------~Vi~~~r~~--~~~~~~~~~~~~~~-~~-~~v~~~~~D~~~~~~i~~~~   70 (251)
                      +|.|+|++|.+|.++|..|+..|.       ++++++.++  +++......+.+.. +. ..+. +.  -.++       
T Consensus         5 KV~IIGa~G~VG~~~a~~l~~~~~~~~~~~~el~L~Di~~~~~~a~g~a~Dl~~~~~~~~~~~~-i~--~~~~-------   74 (323)
T TIGR01759         5 RVAVTGAAGQIGYSLLFRIASGELFGKDQPVVLHLLDIPPAMKALEGVAMELEDCAFPLLAGVV-AT--TDPE-------   74 (323)
T ss_pred             EEEEECCCcHHHHHHHHHHHhCCcccCCCccEEEEEecCCcccccchHHHHHhhccccccCCcE-Ee--cChH-------
Confidence            588999999999999999998874       699999965  34555555554432 11 0111 11  1111       


Q ss_pred             HHHHhcCCCeeEEEEcCCCCCCCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCC-CceEEEEcC
Q 025509           71 SEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGG-EGRIINVSS  141 (251)
Q Consensus        71 ~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~-~g~iv~vsS  141 (251)
                          +.....|+||.+||....+.    ++-.+.++.|.    .+++.+.+.+.+.    ++ .+.++++|.
T Consensus        75 ----~~~~daDvVVitAG~~~k~g----~tR~dll~~Na----~i~~~i~~~i~~~----~~~~~iiivvsN  130 (323)
T TIGR01759        75 ----EAFKDVDAALLVGAFPRKPG----MERADLLSKNG----KIFKEQGKALNKV----AKKDVKVLVVGN  130 (323)
T ss_pred             ----HHhCCCCEEEEeCCCCCCCC----CcHHHHHHHHH----HHHHHHHHHHHhh----CCCCeEEEEeCC
Confidence                12237899999999754321    22344455564    4556666666665    23 677777774

This model represents a family of malate dehydrogenases in bacteria and eukaryotes which utilize either NAD or NADP depending on the species and context. MDH interconverts malate and oxaloacetate and is a part of the citric acid cycle as well as the C4 cycle in certain photosynthetic organisms.

>PLN02819 lysine-ketoglutarate reductase/saccharopine dehydrogenase

Probab=96.63  E-value=0.0087  Score=59.14  Aligned_cols=75  Identities=24%  Similarity=0.356  Sum_probs=58.0

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcC-CE-------------EEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHH
Q 025509            1 MDIVITGATSGIGTETARVLALRG-VH-------------VVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASV   66 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G-~~-------------Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i   66 (251)
                      |+|+|.|+ |.||...|+.|++.. +.             |.+.+++.+.++++.+.    ++  ++.++++|++|.+++
T Consensus       570 ~rIlVLGA-G~VG~~~a~~La~~~~~~~~~~~~~~~~~~lV~VaD~~~~~a~~la~~----~~--~~~~v~lDv~D~e~L  642 (1042)
T PLN02819        570 QNVLILGA-GRVCRPAAEYLASVKTISYYGDDSEEPTDVHVIVASLYLKDAKETVEG----IE--NAEAVQLDVSDSESL  642 (1042)
T ss_pred             CcEEEECC-CHHHHHHHHHHHhCcCccccccccccccccEEEEECCCHHHHHHHHHh----cC--CCceEEeecCCHHHH
Confidence            46899996 999999999999753 34             77888887766655443    22  467899999999888


Q ss_pred             HHHHHHHHhcCCCeeEEEEcCCC
Q 025509           67 RNFASEYNIQHHQLNILINNAGI   89 (251)
Q Consensus        67 ~~~~~~~~~~~g~id~lv~~ag~   89 (251)
                      .++++       .+|+||++...
T Consensus       643 ~~~v~-------~~DaVIsalP~  658 (1042)
T PLN02819        643 LKYVS-------QVDVVISLLPA  658 (1042)
T ss_pred             HHhhc-------CCCEEEECCCc
Confidence            77655       58999999874

>cd08294 leukotriene_B4_DH_like 13-PGR is a bifunctional enzyme with delta-13 15-prostaglandin reductase and leukotriene B4 12 hydroxydehydrogenase activity

Probab=96.63  E-value=0.01  Score=50.96  Aligned_cols=76  Identities=14%  Similarity=0.293  Sum_probs=49.9

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      +++||+||++++|.++++.+...|++|+.+++++++.+.+.+ +     +.. .+  .|..+.+ +.+.+.+.. . +++
T Consensus       145 ~~vlI~ga~g~vG~~aiqlA~~~G~~vi~~~~s~~~~~~l~~-~-----Ga~-~v--i~~~~~~-~~~~v~~~~-~-~gv  212 (329)
T cd08294         145 ETVVVNGAAGAVGSLVGQIAKIKGCKVIGCAGSDDKVAWLKE-L-----GFD-AV--FNYKTVS-LEEALKEAA-P-DGI  212 (329)
T ss_pred             CEEEEecCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH-c-----CCC-EE--EeCCCcc-HHHHHHHHC-C-CCc
Confidence            368999999999999988888889999999988766544432 2     332 11  2333322 222233332 1 469


Q ss_pred             eEEEEcCC
Q 025509           81 NILINNAG   88 (251)
Q Consensus        81 d~lv~~ag   88 (251)
                      |+++.+.|
T Consensus       213 d~vld~~g  220 (329)
T cd08294         213 DCYFDNVG  220 (329)
T ss_pred             EEEEECCC
Confidence            99998887

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto- 13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of ac

>COG0169 AroE Shikimate 5-dehydrogenase [Amino acid transport and metabolism]

Probab=96.61  E-value=0.01  Score=50.30  Aligned_cols=74  Identities=19%  Similarity=0.277  Sum_probs=52.0

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCC-EEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCC
Q 025509            1 MDIVITGATSGIGTETARVLALRGV-HVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQ   79 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~   79 (251)
                      ++++|.| +||.+++++..|++.|+ ++.++.|+.++++++.+.+.+...  .+.  ..+..+.+..+           .
T Consensus       127 ~~vlilG-AGGAarAv~~aL~~~g~~~i~V~NRt~~ra~~La~~~~~~~~--~~~--~~~~~~~~~~~-----------~  190 (283)
T COG0169         127 KRVLILG-AGGAARAVAFALAEAGAKRITVVNRTRERAEELADLFGELGA--AVE--AAALADLEGLE-----------E  190 (283)
T ss_pred             CEEEEEC-CcHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhhhccc--ccc--ccccccccccc-----------c
Confidence            3577776 57999999999999996 899999999999998887765421  111  11222211111           4


Q ss_pred             eeEEEEcCCCC
Q 025509           80 LNILINNAGIM   90 (251)
Q Consensus        80 id~lv~~ag~~   90 (251)
                      .|+|||+.+..
T Consensus       191 ~dliINaTp~G  201 (283)
T COG0169         191 ADLLINATPVG  201 (283)
T ss_pred             cCEEEECCCCC
Confidence            79999998854

>COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism]

Probab=96.60  E-value=0.01  Score=48.73  Aligned_cols=76  Identities=21%  Similarity=0.255  Sum_probs=57.4

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      |.++|.|+ |-+|..+|+.|.+.|++|++++++++...+....      ...+.++.+|-++++.++++      .-...
T Consensus         1 m~iiIiG~-G~vG~~va~~L~~~g~~Vv~Id~d~~~~~~~~~~------~~~~~~v~gd~t~~~~L~~a------gi~~a   67 (225)
T COG0569           1 MKIIIIGA-GRVGRSVARELSEEGHNVVLIDRDEERVEEFLAD------ELDTHVVIGDATDEDVLEEA------GIDDA   67 (225)
T ss_pred             CEEEEECC-cHHHHHHHHHHHhCCCceEEEEcCHHHHHHHhhh------hcceEEEEecCCCHHHHHhc------CCCcC
Confidence            45666665 6799999999999999999999998876663321      24688899999997777653      11267


Q ss_pred             eEEEEcCCC
Q 025509           81 NILINNAGI   89 (251)
Q Consensus        81 d~lv~~ag~   89 (251)
                      |++|...|-
T Consensus        68 D~vva~t~~   76 (225)
T COG0569          68 DAVVAATGN   76 (225)
T ss_pred             CEEEEeeCC
Confidence            888888773

>PRK09424 pntA NAD(P) transhydrogenase subunit alpha; Provisional

Probab=96.56  E-value=0.05  Score=50.00  Aligned_cols=80  Identities=19%  Similarity=0.224  Sum_probs=51.7

Q ss_pred             EEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCH-------------HHHHH
Q 025509            2 DIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSL-------------ASVRN   68 (251)
Q Consensus         2 ~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~-------------~~i~~   68 (251)
                      +|+|+|+ |.+|...+..+...|++|+++++++++++.+.+ +     +.+.  +..|..+.             +..++
T Consensus       167 kVlViGa-G~iGL~Ai~~Ak~lGA~V~a~D~~~~rle~aes-l-----GA~~--v~i~~~e~~~~~~gya~~~s~~~~~~  237 (509)
T PRK09424        167 KVLVIGA-GVAGLAAIGAAGSLGAIVRAFDTRPEVAEQVES-M-----GAEF--LELDFEEEGGSGDGYAKVMSEEFIKA  237 (509)
T ss_pred             EEEEECC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-c-----CCeE--EEeccccccccccchhhhcchhHHHH
Confidence            5788875 689999999999999999999999877665443 3     4432  22233221             11222


Q ss_pred             HHHHHHhcCCCeeEEEEcCCCC
Q 025509           69 FASEYNIQHHQLNILINNAGIM   90 (251)
Q Consensus        69 ~~~~~~~~~g~id~lv~~ag~~   90 (251)
                      ..+.+.+..+..|++|.++|..
T Consensus       238 ~~~~~~~~~~gaDVVIetag~p  259 (509)
T PRK09424        238 EMALFAEQAKEVDIIITTALIP  259 (509)
T ss_pred             HHHHHHhccCCCCEEEECCCCC
Confidence            2222233335799999999974

>PRK12749 quinate/shikimate dehydrogenase; Reviewed

Probab=96.55  E-value=0.021  Score=48.69  Aligned_cols=78  Identities=18%  Similarity=0.235  Sum_probs=48.9

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCC-EEEEEecCch---hHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhc
Q 025509            1 MDIVITGATSGIGTETARVLALRGV-HVVMGVRDIA---AGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQ   76 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~-~Vi~~~r~~~---~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~   76 (251)
                      |+++|.|+ ||-+++++-.|+..|. +|.++.|+.+   +++++.+.+.+.+ +..+.+.  +..+.+.+.   +    .
T Consensus       125 k~vlvlGa-GGaarAi~~~l~~~g~~~i~i~nRt~~~~~ka~~la~~~~~~~-~~~~~~~--~~~~~~~l~---~----~  193 (288)
T PRK12749        125 KTMVLLGA-GGASTAIGAQGAIEGLKEIKLFNRRDEFFDKALAFAQRVNENT-DCVVTVT--DLADQQAFA---E----A  193 (288)
T ss_pred             CEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCccHHHHHHHHHHHhhhcc-CceEEEe--chhhhhhhh---h----h
Confidence            47899996 6669999999999997 8999999853   6666665553322 1112221  221111111   1    1


Q ss_pred             CCCeeEEEEcCCC
Q 025509           77 HHQLNILINNAGI   89 (251)
Q Consensus        77 ~g~id~lv~~ag~   89 (251)
                      ....|+|||+...
T Consensus       194 ~~~aDivINaTp~  206 (288)
T PRK12749        194 LASADILTNGTKV  206 (288)
T ss_pred             cccCCEEEECCCC
Confidence            2368999998864

>PF01113 DapB_N: Dihydrodipicolinate reductase, N-terminus; InterPro: IPR000846 Dihydrodipicolinate reductase catalyzes the second step in the biosynthesis of diaminopimelic acid and lysine, the NAD or NADP-dependent reduction of 2,3-dihydrodipicolinate into 2,3,4,5-tetrahydrodipicolinate [, , ]

Probab=96.48  E-value=0.023  Score=42.02  Aligned_cols=77  Identities=19%  Similarity=0.268  Sum_probs=54.2

Q ss_pred             CEEEEECCCChhHHHHHHHHHH-cCCEEE-EEecCc----------------------hhHHHHHHHHHhhCCCCceEEE
Q 025509            1 MDIVITGATSGIGTETARVLAL-RGVHVV-MGVRDI----------------------AAGKDVKETIVKEIPSAKVDAM   56 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~-~G~~Vi-~~~r~~----------------------~~~~~~~~~~~~~~~~~~v~~~   56 (251)
                      ++|+|.|++|-+|+++++.+.+ .|++++ .++|+.                      +.+++..+         ... +
T Consensus         1 mrV~i~G~~GrMG~~i~~~i~~~~~~~lv~~v~~~~~~~~g~d~g~~~~~~~~~~~v~~~l~~~~~---------~~D-V   70 (124)
T PF01113_consen    1 MRVGIVGASGRMGRAIAEAILESPGFELVGAVDRKPSAKVGKDVGELAGIGPLGVPVTDDLEELLE---------EAD-V   70 (124)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHSTTEEEEEEEETTTSTTTTSBCHHHCTSST-SSBEBS-HHHHTT---------H-S-E
T ss_pred             CEEEEECCCCHHHHHHHHHHHhcCCcEEEEEEecCCcccccchhhhhhCcCCcccccchhHHHhcc---------cCC-E
Confidence            4789999999999999999998 677865 455655                      12222211         122 5


Q ss_pred             EecCCCHHHHHHHHHHHHhcCCCeeEEEEcCCC
Q 025509           57 ELDLSSLASVRNFASEYNIQHHQLNILINNAGI   89 (251)
Q Consensus        57 ~~D~~~~~~i~~~~~~~~~~~g~id~lv~~ag~   89 (251)
                      ..|+|.++.+...++...+.  ++.+|+-..|+
T Consensus        71 vIDfT~p~~~~~~~~~~~~~--g~~~ViGTTG~  101 (124)
T PF01113_consen   71 VIDFTNPDAVYDNLEYALKH--GVPLVIGTTGF  101 (124)
T ss_dssp             EEEES-HHHHHHHHHHHHHH--T-EEEEE-SSS
T ss_pred             EEEcCChHHhHHHHHHHHhC--CCCEEEECCCC
Confidence            57999999999988887665  68899999985

In Escherichia coli and Mycobacterium tuberculosis, dihydrodipicolinate reductase has equal specificity for NADH and NADPH, however in Thermotoga maritima there it has a greater affinity for NADPH []. In addition, the enzyme is inhibited by high concentrations of its substrate, which consequently acts as a feedback control on the lysine biosynthesis pathway. In T. maritima, the enzyme also lacks N-terminal and C-terminal loops which are present in enzyme of the former two organisms. This entry represents the N-terminal domain of dihydrodipicolinate reductase which binds the dinucleotide NAD(P)H.; GO: 0008839 dihydrodipicolinate reductase activity, 0009089 lysine biosynthetic process via diaminopimelate, 0055114 oxidation-reduction process; PDB: 3QY9_D 1VM6_C 1ARZ_A 1DIH_A 1DRW_A 1DRV_A 1DRU_A 2DAP_A 1DAP_B 3DAP_A ....

>PRK09880 L-idonate 5-dehydrogenase; Provisional

Probab=96.47  E-value=0.02  Score=49.79  Aligned_cols=73  Identities=11%  Similarity=0.195  Sum_probs=48.2

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCC-EEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCC
Q 025509            1 MDIVITGATSGIGTETARVLALRGV-HVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQ   79 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~   79 (251)
                      ++|+|+|+ |++|...++.+...|+ +|+++++++++.+.+. ++     +....   .|..+ +++.+    +....+.
T Consensus       171 ~~VlV~G~-G~vG~~aiqlak~~G~~~Vi~~~~~~~~~~~a~-~l-----Ga~~v---i~~~~-~~~~~----~~~~~g~  235 (343)
T PRK09880        171 KRVFVSGV-GPIGCLIVAAVKTLGAAEIVCADVSPRSLSLAR-EM-----GADKL---VNPQN-DDLDH----YKAEKGY  235 (343)
T ss_pred             CEEEEECC-CHHHHHHHHHHHHcCCcEEEEEeCCHHHHHHHH-Hc-----CCcEE---ecCCc-ccHHH----HhccCCC
Confidence            36899986 8999999988888898 6888999877655432 23     33221   24333 22332    2222356


Q ss_pred             eeEEEEcCC
Q 025509           80 LNILINNAG   88 (251)
Q Consensus        80 id~lv~~ag   88 (251)
                      +|+++.++|
T Consensus       236 ~D~vid~~G  244 (343)
T PRK09880        236 FDVSFEVSG  244 (343)
T ss_pred             CCEEEECCC
Confidence            999999998

>TIGR01757 Malate-DH_plant malate dehydrogenase, NADP-dependent

Probab=96.43  E-value=0.062  Score=47.66  Aligned_cols=115  Identities=13%  Similarity=0.118  Sum_probs=72.6

Q ss_pred             EEEEECCCChhHHHHHHHHHHcCC-E----EEE----EecCchhHHHHHHHHHhhC-CC-CceEEEEecCCCHHHHHHHH
Q 025509            2 DIVITGATSGIGTETARVLALRGV-H----VVM----GVRDIAAGKDVKETIVKEI-PS-AKVDAMELDLSSLASVRNFA   70 (251)
Q Consensus         2 ~vlItG~s~gIG~a~a~~l~~~G~-~----Vi~----~~r~~~~~~~~~~~~~~~~-~~-~~v~~~~~D~~~~~~i~~~~   70 (251)
                      +|.|+|++|.+|.++|-.|+..|. .    |.+    +++++++++....++.+.. +- ..+. +..  .+.+.     
T Consensus        46 KV~IIGAaG~VG~~~A~~l~~~~l~~~~~ei~L~L~diD~~~~~a~g~a~DL~d~a~~~~~~v~-i~~--~~y~~-----  117 (387)
T TIGR01757        46 NVAVSGAAGMISNHLLFMLASGEVFGQDQPIALKLLGSERSKEALEGVAMELEDSLYPLLREVS-IGI--DPYEV-----  117 (387)
T ss_pred             EEEEECCCcHHHHHHHHHHHhccccCCCCceEEEEeccCccchhhhHHHHHHHHhhhhhcCceE-Eec--CCHHH-----
Confidence            489999999999999999998764 3    444    4888888888877776643 21 1111 111  22222     


Q ss_pred             HHHHhcCCCeeEEEEcCCCCCCCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcC
Q 025509           71 SEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSS  141 (251)
Q Consensus        71 ~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS  141 (251)
                            +...|++|..||....+.    ++-.+.++.|.    .+++...+.+.+..   ++.+.++++|.
T Consensus       118 ------~kdaDIVVitAG~prkpg----~tR~dll~~N~----~I~k~i~~~I~~~a---~~~~iviVVsN  171 (387)
T TIGR01757       118 ------FEDADWALLIGAKPRGPG----MERADLLDING----QIFADQGKALNAVA---SKNCKVLVVGN  171 (387)
T ss_pred             ------hCCCCEEEECCCCCCCCC----CCHHHHHHHHH----HHHHHHHHHHHHhC---CCCeEEEEcCC
Confidence                  237899999999754321    22334455564    45556666665532   14677888875

This model represents the NADP-dependent malate dehydrogenase found in plants, mosses and green algae and localized to the chloroplast. Malate dehydrogenase converts oxaloacetate into malate, a critical step in the C4 cycle which allows circumvention of the effects of photorespiration. Malate is subsequenctly transported from the chloroplast to the cytoplasm (and then to the bundle sheath cells in C4 plants). The plant and moss enzymes are light regulated via cysteine disulfide bonds. The enzyme from Sorghum has been crystallized.

>cd01486 Apg7 Apg7 is an E1-like protein, that activates two different ubiquitin-like proteins, Apg12 and Apg8, and assigns them to specific E2 enzymes, Apg10 and Apg3, respectively

Probab=96.42  E-value=0.018  Score=49.11  Aligned_cols=31  Identities=29%  Similarity=0.398  Sum_probs=25.6

Q ss_pred             EEEEECCCChhHHHHHHHHHHcCC-EEEEEecC
Q 025509            2 DIVITGATSGIGTETARVLALRGV-HVVMGVRD   33 (251)
Q Consensus         2 ~vlItG~s~gIG~a~a~~l~~~G~-~Vi~~~r~   33 (251)
                      +|||.|+ ||+|..+|+.|+..|. ++.+++.+
T Consensus         1 kVLIvGa-GGLGs~vA~~La~aGVg~ItlvD~D   32 (307)
T cd01486           1 KCLLLGA-GTLGCNVARNLLGWGVRHITFVDSG   32 (307)
T ss_pred             CEEEECC-CHHHHHHHHHHHHcCCCeEEEECCC
Confidence            3677765 6999999999999998 78888754

This leads to the covalent conjugation of Apg8 with phosphatidylethanolamine, an important step in autophagy. Autophagy is a dynamic membrane phenomenon for bulk protein degradation in the lysosome/vacuole.

>PRK00045 hemA glutamyl-tRNA reductase; Reviewed

Probab=96.41  E-value=0.019  Score=51.66  Aligned_cols=43  Identities=23%  Similarity=0.478  Sum_probs=36.0

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCC-EEEEEecCchhHHHHHHHH
Q 025509            1 MDIVITGATSGIGTETARVLALRGV-HVVMGVRDIAAGKDVKETI   44 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~-~Vi~~~r~~~~~~~~~~~~   44 (251)
                      ++++|.|+ |.+|..+++.|...|+ +|++++|+.+++.+..+.+
T Consensus       183 ~~vlViGa-G~iG~~~a~~L~~~G~~~V~v~~r~~~ra~~la~~~  226 (423)
T PRK00045        183 KKVLVIGA-GEMGELVAKHLAEKGVRKITVANRTLERAEELAEEF  226 (423)
T ss_pred             CEEEEECc-hHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHc
Confidence            46899986 9999999999999998 8999999987776665543

>TIGR02824 quinone_pig3 putative NAD(P)H quinone oxidoreductase, PIG3 family

Probab=96.41  E-value=0.03  Score=47.55  Aligned_cols=77  Identities=18%  Similarity=0.262  Sum_probs=50.2

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      ++++|+|+++++|.+++..+...|++|+++.++++..+.+ .++     +.+  . ..+..+.+....+.... . ..++
T Consensus       141 ~~vlv~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~-----g~~--~-~~~~~~~~~~~~~~~~~-~-~~~~  209 (325)
T TIGR02824       141 ETVLIHGGASGIGTTAIQLAKAFGARVFTTAGSDEKCAAC-EAL-----GAD--I-AINYREEDFVEVVKAET-G-GKGV  209 (325)
T ss_pred             CEEEEEcCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HHc-----CCc--E-EEecCchhHHHHHHHHc-C-CCCe
Confidence            3689999999999999999999999999998887654432 221     221  1 12333333333333222 1 1369


Q ss_pred             eEEEEcCC
Q 025509           81 NILINNAG   88 (251)
Q Consensus        81 d~lv~~ag   88 (251)
                      |.+++++|
T Consensus       210 d~~i~~~~  217 (325)
T TIGR02824       210 DVILDIVG  217 (325)
T ss_pred             EEEEECCc
Confidence            99999987

Members of this family are putative quinone oxidoreductases that belong to the broader superfamily (modeled by Pfam pfam00107) of zinc-dependent alcohol (of medium chain length) dehydrogenases and quinone oxiooreductases. The alignment shows no motif of conserved Cys residues as are found in zinc-binding members of the superfamily, and members are likely to be quinone oxidoreductases instead. A member of this family in Homo sapiens, PIG3, is induced by p53 but is otherwise uncharacterized.

>TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit

Probab=96.40  E-value=0.016  Score=49.39  Aligned_cols=38  Identities=24%  Similarity=0.370  Sum_probs=32.7

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHH
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKD   39 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~   39 (251)
                      ++++|+|. |++|+++|+.|...|++|.+..|+.++...
T Consensus       152 k~v~IiG~-G~iG~avA~~L~~~G~~V~v~~R~~~~~~~  189 (287)
T TIGR02853       152 SNVMVLGF-GRTGMTIARTFSALGARVFVGARSSADLAR  189 (287)
T ss_pred             CEEEEEcC-hHHHHHHHHHHHHCCCEEEEEeCCHHHHHH
Confidence            57899998 669999999999999999999998765433

This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA.

>cd05213 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain of glutamyl-tRNA reductase

Probab=96.40  E-value=0.021  Score=49.23  Aligned_cols=69  Identities=19%  Similarity=0.448  Sum_probs=48.9

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCC-EEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCC
Q 025509            1 MDIVITGATSGIGTETARVLALRGV-HVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQ   79 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~   79 (251)
                      ++|+|.|+ |.+|..+++.|...|. +|++++|+.++..+..+++     +.  .++     +.+++.+.+.       .
T Consensus       179 ~~V~ViGa-G~iG~~~a~~L~~~g~~~V~v~~r~~~ra~~la~~~-----g~--~~~-----~~~~~~~~l~-------~  238 (311)
T cd05213         179 KKVLVIGA-GEMGELAAKHLAAKGVAEITIANRTYERAEELAKEL-----GG--NAV-----PLDELLELLN-------E  238 (311)
T ss_pred             CEEEEECc-HHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHc-----CC--eEE-----eHHHHHHHHh-------c
Confidence            46889987 9999999999998774 7999999988777766554     22  122     2233333222       5


Q ss_pred             eeEEEEcCCC
Q 025509           80 LNILINNAGI   89 (251)
Q Consensus        80 id~lv~~ag~   89 (251)
                      .|++|.+.+.
T Consensus       239 aDvVi~at~~  248 (311)
T cd05213         239 ADVVISATGA  248 (311)
T ss_pred             CCEEEECCCC
Confidence            7999999984

Glutamyl-tRNA reductase catalyzes the conversion of glutamyl-tRNA to glutamate-1-semialdehyde, initiating the synthesis of tetrapyrrole. Whereas tRNAs are generally associated with peptide bond formation in protein translation, here the tRNA activates glutamate in the initiation of tetrapyrrole biosynthesis in archaea, plants and many bacteria. In the first step, activated glutamate is reduced to glutamate-1-semi-aldehyde via the NADPH dependent glutamyl-tRNA reductase. Glutamyl-tRNA reductase forms a V-shaped dimer. Each monomer has 3 domains: an N-terminal catalytic domain, a classic nucleotide binding domain, and a C-terminal dimerization domain. Although the representative structure 1GPJ lacks a bound NADPH, a theoretical binding pocket has been described. (PMID 11172694). Amino acid dehydrogenase (DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate,

>cd01339 LDH-like_MDH L-lactate dehydrogenase-like malate dehydrogenase proteins

Probab=96.38  E-value=0.099  Score=44.81  Aligned_cols=115  Identities=21%  Similarity=0.234  Sum_probs=66.2

Q ss_pred             EEEECCCChhHHHHHHHHHHcCC-EEEEEecCchhHHHHHHHHHhhCC--CCceEEEEecCCCHHHHHHHHHHHHhcCCC
Q 025509            3 IVITGATSGIGTETARVLALRGV-HVVMGVRDIAAGKDVKETIVKEIP--SAKVDAMELDLSSLASVRNFASEYNIQHHQ   79 (251)
Q Consensus         3 vlItG~s~gIG~a~a~~l~~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~--~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~   79 (251)
                      |.|.|+ |.+|..+|..|+.+|. +|++++++++.+......+.+...  ..... +.. -+|.++       +    ..
T Consensus         1 I~IIGa-G~vG~~ia~~la~~~l~eV~L~Di~e~~~~g~~~dl~~~~~~~~~~~~-I~~-t~d~~~-------l----~d   66 (300)
T cd01339           1 ISIIGA-GNVGATLAQLLALKELGDVVLLDIVEGLPQGKALDISQAAPILGSDTK-VTG-TNDYED-------I----AG   66 (300)
T ss_pred             CEEECC-CHHHHHHHHHHHhCCCcEEEEEeCCCcHHHHHHHHHHHhhhhcCCCeE-EEE-cCCHHH-------h----CC
Confidence            468898 8899999999998876 999999997765433322322110  11111 111 112221       1    27


Q ss_pred             eeEEEEcCCCCCCCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCcc
Q 025509           80 LNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEG  143 (251)
Q Consensus        80 id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~  143 (251)
                      .|++|.++|...... .+   -.+.+..|    .-+.+.+.+.+.+.    ++.+.++++|...
T Consensus        67 ADiVIit~g~p~~~~-~~---r~e~~~~n----~~i~~~i~~~i~~~----~p~~~iIv~sNP~  118 (300)
T cd01339          67 SDVVVITAGIPRKPG-MS---RDDLLGTN----AKIVKEVAENIKKY----APNAIVIVVTNPL  118 (300)
T ss_pred             CCEEEEecCCCCCcC-CC---HHHHHHHH----HHHHHHHHHHHHHH----CCCeEEEEecCcH
Confidence            899999999643322 11   12233334    44556666666665    2456777777543

Members of this subfamily have an LDH-like structure and an MDH enzymatic activity. Some members, like MJ0490 from Methanococcus jannaschii, exhibit both MDH and LDH activities. Tetrameric MDHs, including those from phototrophic bacteria, are more similar to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH-like MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenas

>PRK07411 hypothetical protein; Validated

Probab=96.37  E-value=0.037  Score=49.25  Aligned_cols=60  Identities=27%  Similarity=0.365  Sum_probs=45.1

Q ss_pred             EEEEECCCChhHHHHHHHHHHcCC-EEEEEecCc-------------------hhHHHHHHHHHhhCCCCceEEEEecCC
Q 025509            2 DIVITGATSGIGTETARVLALRGV-HVVMGVRDI-------------------AAGKDVKETIVKEIPSAKVDAMELDLS   61 (251)
Q Consensus         2 ~vlItG~s~gIG~a~a~~l~~~G~-~Vi~~~r~~-------------------~~~~~~~~~~~~~~~~~~v~~~~~D~~   61 (251)
                      +|+|.|+ ||+|..+++.|+..|. ++.+++.+.                   .+.+.+.+.+.+..|..++..+...++
T Consensus        40 ~VlivG~-GGlG~~va~~La~~Gvg~l~lvD~D~ve~sNL~RQ~l~~~~dvG~~Ka~~a~~~l~~~np~v~v~~~~~~~~  118 (390)
T PRK07411         40 SVLCIGT-GGLGSPLLLYLAAAGIGRIGIVDFDVVDSSNLQRQVIHGTSWVGKPKIESAKNRILEINPYCQVDLYETRLS  118 (390)
T ss_pred             cEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCEecccccCcCcccChHHCCCcHHHHHHHHHHHHCCCCeEEEEecccC
Confidence            5788865 5999999999999998 788887652                   245566777777777777777766555


Q ss_pred             C
Q 025509           62 S   62 (251)
Q Consensus        62 ~   62 (251)
                      .
T Consensus       119 ~  119 (390)
T PRK07411        119 S  119 (390)
T ss_pred             H
Confidence            3

>PF10727 Rossmann-like: Rossmann-like domain; InterPro: IPR019665 This entry represents an NAD/NADP-binding domain with a core Rossmann-type fold, found in an uncharacterised protein family thought to be putative NADP oxidoreductase coenzyme F420-dependent proteins and/or NAD-dependent glycerol-3-phosphate dehydrogenase-like proteins

Probab=96.34  E-value=0.011  Score=43.96  Aligned_cols=85  Identities=24%  Similarity=0.287  Sum_probs=53.0

Q ss_pred             EEEEECCCChhHHHHHHHHHHcCCEEEEE-ecCchhHHHHHHHHH--------hhCCCCceEEEEecCCCHHHHHHHHHH
Q 025509            2 DIVITGATSGIGTETARVLALRGVHVVMG-VRDIAAGKDVKETIV--------KEIPSAKVDAMELDLSSLASVRNFASE   72 (251)
Q Consensus         2 ~vlItG~s~gIG~a~a~~l~~~G~~Vi~~-~r~~~~~~~~~~~~~--------~~~~~~~v~~~~~D~~~~~~i~~~~~~   72 (251)
                      +|-|.|+ |-+|.++++.|.+.|++|..+ +|+..+.+++...+.        +....  ..++-+-+.| +.+..+.++
T Consensus        12 ~I~iIGa-GrVG~~La~aL~~ag~~v~~v~srs~~sa~~a~~~~~~~~~~~~~~~~~~--aDlv~iavpD-daI~~va~~   87 (127)
T PF10727_consen   12 KIGIIGA-GRVGTALARALARAGHEVVGVYSRSPASAERAAAFIGAGAILDLEEILRD--ADLVFIAVPD-DAIAEVAEQ   87 (127)
T ss_dssp             EEEEECT-SCCCCHHHHHHHHTTSEEEEESSCHH-HHHHHHC--TT-----TTGGGCC---SEEEE-S-C-CHHHHHHHH
T ss_pred             EEEEECC-CHHHHHHHHHHHHCCCeEEEEEeCCccccccccccccccccccccccccc--CCEEEEEech-HHHHHHHHH
Confidence            5778887 889999999999999998765 476666665554431        11122  3333334554 488888888


Q ss_pred             HHhc--CCCeeEEEEcCCCC
Q 025509           73 YNIQ--HHQLNILINNAGIM   90 (251)
Q Consensus        73 ~~~~--~g~id~lv~~ag~~   90 (251)
                      +...  ..+=.+|+|+.|..
T Consensus        88 La~~~~~~~g~iVvHtSGa~  107 (127)
T PF10727_consen   88 LAQYGAWRPGQIVVHTSGAL  107 (127)
T ss_dssp             HHCC--S-TT-EEEES-SS-
T ss_pred             HHHhccCCCCcEEEECCCCC
Confidence            8765  33346999999953

This Rossmann-fold domain consists of 3-layers alpha/beta/alpha, where the six beta strands are parallel in the order 321456.; PDB: 3DFU_A 3C24_A.

>PRK14851 hypothetical protein; Provisional

Probab=96.33  E-value=0.042  Score=52.29  Aligned_cols=77  Identities=13%  Similarity=0.257  Sum_probs=54.9

Q ss_pred             EEEEECCCChhHHHHHHHHHHcCC-EEEEEecCc-------------------hhHHHHHHHHHhhCCCCceEEEEecCC
Q 025509            2 DIVITGATSGIGTETARVLALRGV-HVVMGVRDI-------------------AAGKDVKETIVKEIPSAKVDAMELDLS   61 (251)
Q Consensus         2 ~vlItG~s~gIG~a~a~~l~~~G~-~Vi~~~r~~-------------------~~~~~~~~~~~~~~~~~~v~~~~~D~~   61 (251)
                      +|+|.| .||+|.++++.|+..|. ++.+++.+.                   .|.+-+.+.+.+..|..++..+...++
T Consensus        45 ~VlIvG-~GGlGs~va~~Lar~GVG~l~LvD~D~ve~sNLNRQ~~~~~~dvG~~Kv~v~~~~l~~inP~~~I~~~~~~i~  123 (679)
T PRK14851         45 KVAIPG-MGGVGGVHLITMVRTGIGRFHIADFDQFEPVNVNRQFGARVPSFGRPKLAVMKEQALSINPFLEITPFPAGIN  123 (679)
T ss_pred             eEEEEC-cCHHHHHHHHHHHHhCCCeEEEEcCCEecccccccCcCcChhhCCCHHHHHHHHHHHHhCCCCeEEEEecCCC
Confidence            688887 67999999999999998 788887652                   234455666667777777888777775


Q ss_pred             CHHHHHHHHHHHHhcCCCeeEEEEcC
Q 025509           62 SLASVRNFASEYNIQHHQLNILINNA   87 (251)
Q Consensus        62 ~~~~i~~~~~~~~~~~g~id~lv~~a   87 (251)
                       .+.+..+++       ++|+||.+.
T Consensus       124 -~~n~~~~l~-------~~DvVid~~  141 (679)
T PRK14851        124 -ADNMDAFLD-------GVDVVLDGL  141 (679)
T ss_pred             -hHHHHHHHh-------CCCEEEECC
Confidence             344444443       567777555

>COG1064 AdhP Zn-dependent alcohol dehydrogenases [General function prediction only]

Probab=96.31  E-value=0.033  Score=48.32  Aligned_cols=71  Identities=17%  Similarity=0.208  Sum_probs=51.0

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      +.|+|+|.+ |+|...++.....|++|+.++|++++.+.+.+ +     +.+..+   |.++.+..+.+.+       .+
T Consensus       168 ~~V~I~G~G-GlGh~avQ~Aka~ga~Via~~~~~~K~e~a~~-l-----GAd~~i---~~~~~~~~~~~~~-------~~  230 (339)
T COG1064         168 KWVAVVGAG-GLGHMAVQYAKAMGAEVIAITRSEEKLELAKK-L-----GADHVI---NSSDSDALEAVKE-------IA  230 (339)
T ss_pred             CEEEEECCc-HHHHHHHHHHHHcCCeEEEEeCChHHHHHHHH-h-----CCcEEE---EcCCchhhHHhHh-------hC
Confidence            468999999 99998888888899999999999988766544 2     343332   3334444443333       28


Q ss_pred             eEEEEcCC
Q 025509           81 NILINNAG   88 (251)
Q Consensus        81 d~lv~~ag   88 (251)
                      |++|.+++
T Consensus       231 d~ii~tv~  238 (339)
T COG1064         231 DAIIDTVG  238 (339)
T ss_pred             cEEEECCC
Confidence            99999987

>cd05288 PGDH Prostaglandin dehydrogenases

Probab=96.30  E-value=0.021  Score=49.08  Aligned_cols=76  Identities=16%  Similarity=0.243  Sum_probs=49.7

Q ss_pred             EEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCee
Q 025509            2 DIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQLN   81 (251)
Q Consensus         2 ~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~id   81 (251)
                      ++||.|+++++|.+++..+...|++|+.+.++..+.+.+.+.+     +.. .+  .|..+.+..+. +.++..  +++|
T Consensus       148 ~vlI~g~~g~ig~~~~~~a~~~G~~vi~~~~~~~~~~~~~~~~-----g~~-~~--~~~~~~~~~~~-v~~~~~--~~~d  216 (329)
T cd05288         148 TVVVSAAAGAVGSVVGQIAKLLGARVVGIAGSDEKCRWLVEEL-----GFD-AA--INYKTPDLAEA-LKEAAP--DGID  216 (329)
T ss_pred             EEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhhc-----CCc-eE--EecCChhHHHH-HHHhcc--CCce
Confidence            6899999999999999999999999999988776544433212     221 11  12333222222 222221  4799


Q ss_pred             EEEEcCC
Q 025509           82 ILINNAG   88 (251)
Q Consensus        82 ~lv~~ag   88 (251)
                      +++.++|
T Consensus       217 ~vi~~~g  223 (329)
T cd05288         217 VYFDNVG  223 (329)
T ss_pred             EEEEcch
Confidence            9999887

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino

>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed

Probab=96.29  E-value=0.024  Score=51.30  Aligned_cols=75  Identities=17%  Similarity=0.196  Sum_probs=56.4

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      ++++|.|+ |.+|.++++.|.+.|++|++++++++..++..+.      ...+.++..|.++.+.+++.-      ....
T Consensus       232 ~~iiIiG~-G~~g~~l~~~L~~~~~~v~vid~~~~~~~~~~~~------~~~~~~i~gd~~~~~~L~~~~------~~~a  298 (453)
T PRK09496        232 KRVMIVGG-GNIGYYLAKLLEKEGYSVKLIERDPERAEELAEE------LPNTLVLHGDGTDQELLEEEG------IDEA  298 (453)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHH------CCCCeEEECCCCCHHHHHhcC------CccC
Confidence            46889988 9999999999999999999999998766655442      234677889999887765421      2357


Q ss_pred             eEEEEcCC
Q 025509           81 NILINNAG   88 (251)
Q Consensus        81 d~lv~~ag   88 (251)
                      |.+|...+
T Consensus       299 ~~vi~~~~  306 (453)
T PRK09496        299 DAFIALTN  306 (453)
T ss_pred             CEEEECCC
Confidence            77776554

>PF03446 NAD_binding_2: NAD binding domain of 6-phosphogluconate dehydrogenase; InterPro: IPR006115 6-Phosphogluconate dehydrogenase (1

Probab=96.25  E-value=0.077  Score=41.14  Aligned_cols=85  Identities=20%  Similarity=0.184  Sum_probs=56.2

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHH-------HhhCCCCceEEEEecCCCHHHHHHHHHH-
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETI-------VKEIPSAKVDAMELDLSSLASVRNFASE-   72 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~-------~~~~~~~~v~~~~~D~~~~~~i~~~~~~-   72 (251)
                      ++|-+.|- |-+|.++|+.|+++|++|.+.+|++++.+++.+.-       .+.  -....++..=+.+.++++.++.. 
T Consensus         2 ~~Ig~IGl-G~mG~~~a~~L~~~g~~v~~~d~~~~~~~~~~~~g~~~~~s~~e~--~~~~dvvi~~v~~~~~v~~v~~~~   78 (163)
T PF03446_consen    2 MKIGFIGL-GNMGSAMARNLAKAGYEVTVYDRSPEKAEALAEAGAEVADSPAEA--AEQADVVILCVPDDDAVEAVLFGE   78 (163)
T ss_dssp             BEEEEE---SHHHHHHHHHHHHTTTEEEEEESSHHHHHHHHHTTEEEESSHHHH--HHHBSEEEE-SSSHHHHHHHHHCT
T ss_pred             CEEEEEch-HHHHHHHHHHHHhcCCeEEeeccchhhhhhhHHhhhhhhhhhhhH--hhcccceEeecccchhhhhhhhhh
Confidence            35777776 79999999999999999999999988877765431       111  01234555557788888888887 


Q ss_pred             -HHhcCCCeeEEEEcCC
Q 025509           73 -YNIQHHQLNILINNAG   88 (251)
Q Consensus        73 -~~~~~g~id~lv~~ag   88 (251)
                       +.....+=+++|.+..
T Consensus        79 ~i~~~l~~g~iiid~sT   95 (163)
T PF03446_consen   79 NILAGLRPGKIIIDMST   95 (163)
T ss_dssp             THGGGS-TTEEEEE-SS
T ss_pred             HHhhccccceEEEecCC
Confidence             6554444455655553

1.1.44 from EC) (6PGD) is an oxidative carboxylase that catalyses the decarboxylating reduction of 6-phosphogluconate into ribulose 5-phosphate in the presence of NADP. This reaction is a component of the hexose mono-phosphate shunt and pentose phosphate pathways (PPP) [, ]. Prokaryotic and eukaryotic 6PGD are proteins of about 470 amino acids whose sequence are highly conserved []. The protein is a homodimer in which the monomers act independently []: each contains a large, mainly alpha-helical domain and a smaller beta-alpha-beta domain, containing a mixed parallel and anti-parallel 6-stranded beta sheet []. NADP is bound in a cleft in the small domain, the substrate binding in an adjacent pocket []. This family represents the NADP binding domain of 6-phosphogluconate dehydrogenase which adopts a Rossman fold. The C-terminal domain is described in IPR006114 from INTERPRO.; GO: 0004616 phosphogluconate dehydrogenase (decarboxylating) activity, 0006098 pentose-phosphate shunt, 0055114 oxidation-reduction process; PDB: 3AX6_D 3PDU_G 3Q3C_A 3OBB_A 4DLL_B 1PGP_A 1PGN_A 2PGD_A 1PGQ_A 1PGO_A ....

>cd08268 MDR2 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=96.23  E-value=0.037  Score=47.09  Aligned_cols=77  Identities=14%  Similarity=0.231  Sum_probs=49.7

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      ++++|+|+++++|.+++..+...|++|++++++.++.+.+. +.     +. -.++  |.........+. +... ..++
T Consensus       146 ~~vli~g~~~~~g~~~~~~~~~~g~~v~~~~~~~~~~~~~~-~~-----g~-~~~~--~~~~~~~~~~~~-~~~~-~~~~  214 (328)
T cd08268         146 DSVLITAASSSVGLAAIQIANAAGATVIATTRTSEKRDALL-AL-----GA-AHVI--VTDEEDLVAEVL-RITG-GKGV  214 (328)
T ss_pred             CEEEEecCccHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHH-Hc-----CC-CEEE--ecCCccHHHHHH-HHhC-CCCc
Confidence            36899999999999999999999999999998876554432 11     22 1122  222222222222 2221 2269


Q ss_pred             eEEEEcCC
Q 025509           81 NILINNAG   88 (251)
Q Consensus        81 d~lv~~ag   88 (251)
                      |.+++++|
T Consensus       215 d~vi~~~~  222 (328)
T cd08268         215 DVVFDPVG  222 (328)
T ss_pred             eEEEECCc
Confidence            99999987

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>TIGR01035 hemA glutamyl-tRNA reductase

Probab=96.22  E-value=0.029  Score=50.39  Aligned_cols=42  Identities=19%  Similarity=0.362  Sum_probs=35.4

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcC-CEEEEEecCchhHHHHHHH
Q 025509            1 MDIVITGATSGIGTETARVLALRG-VHVVMGVRDIAAGKDVKET   43 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G-~~Vi~~~r~~~~~~~~~~~   43 (251)
                      ++++|.|+ |.+|..+++.|...| .+|++++|+.+++.+..+.
T Consensus       181 ~~VlViGa-G~iG~~~a~~L~~~G~~~V~v~~rs~~ra~~la~~  223 (417)
T TIGR01035       181 KKALLIGA-GEMGELVAKHLLRKGVGKILIANRTYERAEDLAKE  223 (417)
T ss_pred             CEEEEECC-hHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHH
Confidence            46899987 999999999999999 5899999998776665543

This enzyme, together with glutamate-1-semialdehyde-2,1-aminomutase (TIGR00713), leads to the production of delta-amino-levulinic acid from Glu-tRNA.

>PRK07878 molybdopterin biosynthesis-like protein MoeZ; Validated

Probab=96.18  E-value=0.061  Score=47.96  Aligned_cols=59  Identities=27%  Similarity=0.432  Sum_probs=42.5

Q ss_pred             EEEEECCCChhHHHHHHHHHHcCC-EEEEEecCc-------------------hhHHHHHHHHHhhCCCCceEEEEecCC
Q 025509            2 DIVITGATSGIGTETARVLALRGV-HVVMGVRDI-------------------AAGKDVKETIVKEIPSAKVDAMELDLS   61 (251)
Q Consensus         2 ~vlItG~s~gIG~a~a~~l~~~G~-~Vi~~~r~~-------------------~~~~~~~~~~~~~~~~~~v~~~~~D~~   61 (251)
                      +|+|.|+ ||+|..+++.|+..|. ++.+++.+.                   .+.+.+.+.+.+..|..++..+...++
T Consensus        44 ~VlviG~-GGlGs~va~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~a~~~l~~~np~v~i~~~~~~i~  122 (392)
T PRK07878         44 RVLVIGA-GGLGSPTLLYLAAAGVGTLGIVEFDVVDESNLQRQVIHGQSDVGRSKAQSARDSIVEINPLVNVRLHEFRLD  122 (392)
T ss_pred             CEEEECC-CHHHHHHHHHHHHcCCCeEEEECCCEecCcccccccccChhcCCChHHHHHHHHHHHhCCCcEEEEEeccCC
Confidence            5788865 6999999999999998 788887652                   234555666667666666666655554

>PRK05442 malate dehydrogenase; Provisional

Probab=96.15  E-value=0.032  Score=48.46  Aligned_cols=115  Identities=15%  Similarity=0.071  Sum_probs=69.3

Q ss_pred             EEEEECCCChhHHHHHHHHHHcCC-------EEEEEecCch--hHHHHHHHHHhhC-CC-CceEEEEecCCCHHHHHHHH
Q 025509            2 DIVITGATSGIGTETARVLALRGV-------HVVMGVRDIA--AGKDVKETIVKEI-PS-AKVDAMELDLSSLASVRNFA   70 (251)
Q Consensus         2 ~vlItG~s~gIG~a~a~~l~~~G~-------~Vi~~~r~~~--~~~~~~~~~~~~~-~~-~~v~~~~~D~~~~~~i~~~~   70 (251)
                      +|.|+|++|.+|.++|-.|+..|.       .+++++.++.  ++.....++.+.. +- ..+.+ ..  .+        
T Consensus         6 KV~IiGaaG~VG~~~a~~l~~~~~~~~~~~~el~LiDi~~~~~~~~g~a~Dl~~~~~~~~~~~~i-~~--~~--------   74 (326)
T PRK05442          6 RVAVTGAAGQIGYSLLFRIASGDMLGKDQPVILQLLEIPPALKALEGVVMELDDCAFPLLAGVVI-TD--DP--------   74 (326)
T ss_pred             EEEEECCCcHHHHHHHHHHHhhhhcCCCCccEEEEEecCCcccccceeehhhhhhhhhhcCCcEE-ec--Ch--------
Confidence            689999999999999999988763       6999998543  3444443443321 10 11211 11  11        


Q ss_pred             HHHHhcCCCeeEEEEcCCCCCCCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcC
Q 025509           71 SEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSS  141 (251)
Q Consensus        71 ~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS  141 (251)
                         .+.....|++|.+||....+.    ++-.+.++.|.    .+++.+.+.+.+...   +.+.++++|.
T Consensus        75 ---y~~~~daDiVVitaG~~~k~g----~tR~dll~~Na----~i~~~i~~~i~~~~~---~~~iiivvsN  131 (326)
T PRK05442         75 ---NVAFKDADVALLVGARPRGPG----MERKDLLEANG----AIFTAQGKALNEVAA---RDVKVLVVGN  131 (326)
T ss_pred             ---HHHhCCCCEEEEeCCCCCCCC----CcHHHHHHHHH----HHHHHHHHHHHHhCC---CCeEEEEeCC
Confidence               122347899999999754321    22344455564    456666677666421   3577787775

>TIGR01771 L-LDH-NAD L-lactate dehydrogenase

Probab=96.14  E-value=0.15  Score=43.81  Aligned_cols=111  Identities=13%  Similarity=0.146  Sum_probs=71.3

Q ss_pred             ECCCChhHHHHHHHHHHcCC--EEEEEecCchhHHHHHHHHHhhCC--CCceEEEEecCCCHHHHHHHHHHHHhcCCCee
Q 025509            6 TGATSGIGTETARVLALRGV--HVVMGVRDIAAGKDVKETIVKEIP--SAKVDAMELDLSSLASVRNFASEYNIQHHQLN   81 (251)
Q Consensus         6 tG~s~gIG~a~a~~l~~~G~--~Vi~~~r~~~~~~~~~~~~~~~~~--~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~id   81 (251)
                      .| +|.+|.++|..|+..+.  ++++++++++.+......+....+  ...+.+.   ..+.+.           +...|
T Consensus         2 IG-aG~VG~~~a~~l~~~~l~~el~L~Di~~~~~~g~a~Dl~~~~~~~~~~~~i~---~~~~~~-----------~~daD   66 (299)
T TIGR01771         2 IG-AGNVGSSTAFALLNQGIADEIVLIDINKDKAEGEAMDLQHAASFLPTPKKIR---SGDYSD-----------CKDAD   66 (299)
T ss_pred             CC-cCHHHHHHHHHHHhcCCCCEEEEEeCCCChhhHHHHHHHHhhcccCCCeEEe---cCCHHH-----------HCCCC
Confidence            45 58999999999998875  699999998888877777766432  1122222   123222           23789


Q ss_pred             EEEEcCCCCCCCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCcc
Q 025509           82 ILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEG  143 (251)
Q Consensus        82 ~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~  143 (251)
                      ++|..||....+. ++   -.+.++.|.    .+++...+.+.+.    ++.+.++++|...
T Consensus        67 ivVitag~~rk~g-~~---R~dll~~N~----~i~~~~~~~i~~~----~p~~~vivvsNP~  116 (299)
T TIGR01771        67 LVVITAGAPQKPG-ET---RLELVGRNV----RIMKSIVPEVVKS----GFDGIFLVATNPV  116 (299)
T ss_pred             EEEECCCCCCCCC-CC---HHHHHHHHH----HHHHHHHHHHHHh----CCCeEEEEeCCHH
Confidence            9999999754321 22   234455554    3455555555554    3578888888643

This model represents the NAD-dependent L-lactate dehydrogenases from bacteria and eukaryotes. This enzyme function as as the final step in anaerobic glycolysis. Although lactate dehydrogenases have in some cases been mistaken for malate dehydrogenases due to the similarity of these two substrates and the apparent ease with which evolution can toggle these activities, critical residues have been identified which can discriminate between the two activities. At the time of the creation of this model no hits above the trusted cutoff contained critical residues typical of malate dehydrogenases.

>TIGR01763 MalateDH_bact malate dehydrogenase, NAD-dependent

Probab=96.12  E-value=0.22  Score=42.79  Aligned_cols=119  Identities=18%  Similarity=0.112  Sum_probs=66.9

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCC-EEEEEecCchhHHHHHHHHHhhCCCCce-EEEEecCCCHHHHHHHHHHHHhcCC
Q 025509            1 MDIVITGATSGIGTETARVLALRGV-HVVMGVRDIAAGKDVKETIVKEIPSAKV-DAMELDLSSLASVRNFASEYNIQHH   78 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~v-~~~~~D~~~~~~i~~~~~~~~~~~g   78 (251)
                      +.|.|.|+ |.+|..+|..|+.+|. +|++++.+++........+.+..+.... ..+.. -++.++       +    .
T Consensus         2 ~KV~VIGa-G~vG~~iA~~la~~g~~~VvlvDi~~~l~~g~a~d~~~~~~~~~~~~~i~~-t~d~~~-------~----~   68 (305)
T TIGR01763         2 KKISVIGA-GFVGATTAFRLAEKELADLVLLDVVEGIPQGKALDMYEASPVGGFDTKVTG-TNNYAD-------T----A   68 (305)
T ss_pred             CEEEEECc-CHHHHHHHHHHHHcCCCeEEEEeCCCChhHHHHHhhhhhhhccCCCcEEEe-cCCHHH-------h----C
Confidence            46788997 8899999999999886 8999999766544232222221110000 01111 012221       1    3


Q ss_pred             CeeEEEEcCCCCCCCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccc
Q 025509           79 QLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGH  144 (251)
Q Consensus        79 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~  144 (251)
                      ..|++|.++|..... ..+   -.+.+..|..-...+++.+.++.        +.+.||++|....
T Consensus        69 ~aDiVIitag~p~~~-~~s---R~~l~~~N~~iv~~i~~~I~~~~--------p~~~iIv~tNP~d  122 (305)
T TIGR01763        69 NSDIVVITAGLPRKP-GMS---REDLLSMNAGIVREVTGRIMEHS--------PNPIIVVVSNPLD  122 (305)
T ss_pred             CCCEEEEcCCCCCCc-CCC---HHHHHHHHHHHHHHHHHHHHHHC--------CCeEEEEecCcHH
Confidence            689999999964322 112   22345556554444444444432        3578888887443

The annotation of Botryococcus braunii as lactate dehydrogenase appears top be in error. This was initially annotated as MDH by Swiss-Prot and then changed. The rationale for either of these annotations is not traceable.

>PRK07877 hypothetical protein; Provisional

Probab=96.11  E-value=0.048  Score=52.20  Aligned_cols=77  Identities=21%  Similarity=0.288  Sum_probs=57.2

Q ss_pred             EEEEECCCChhHHHHHHHHHHcC-C-EEEEEecCc------------------hhHHHHHHHHHhhCCCCceEEEEecCC
Q 025509            2 DIVITGATSGIGTETARVLALRG-V-HVVMGVRDI------------------AAGKDVKETIVKEIPSAKVDAMELDLS   61 (251)
Q Consensus         2 ~vlItG~s~gIG~a~a~~l~~~G-~-~Vi~~~r~~------------------~~~~~~~~~~~~~~~~~~v~~~~~D~~   61 (251)
                      +|+|.|+ | +|..++..|+..| + ++++++.+.                  .|.+-+++.+.+..|..++..+...++
T Consensus       109 ~V~IvG~-G-lGs~~a~~LaraGvvG~l~lvD~D~ve~sNLnRq~~~~~diG~~Kv~~a~~~l~~inp~i~v~~~~~~i~  186 (722)
T PRK07877        109 RIGVVGL-S-VGHAIAHTLAAEGLCGELRLADFDTLELSNLNRVPAGVFDLGVNKAVVAARRIAELDPYLPVEVFTDGLT  186 (722)
T ss_pred             CEEEEEe-c-HHHHHHHHHHHccCCCeEEEEcCCEEcccccccccCChhhcccHHHHHHHHHHHHHCCCCEEEEEeccCC
Confidence            6999999 3 9999999999999 3 888887652                  245556677777777778888887776


Q ss_pred             CHHHHHHHHHHHHhcCCCeeEEEEcCC
Q 025509           62 SLASVRNFASEYNIQHHQLNILINNAG   88 (251)
Q Consensus        62 ~~~~i~~~~~~~~~~~g~id~lv~~ag   88 (251)
                       .+.+.++++       ++|+||.|.-
T Consensus       187 -~~n~~~~l~-------~~DlVvD~~D  205 (722)
T PRK07877        187 -EDNVDAFLD-------GLDVVVEECD  205 (722)
T ss_pred             -HHHHHHHhc-------CCCEEEECCC
Confidence             455655544       4677777763

>PF02737 3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain; InterPro: IPR006176 3-hydroxyacyl-CoA dehydrogenase (1

Probab=96.09  E-value=0.022  Score=45.07  Aligned_cols=44  Identities=23%  Similarity=0.323  Sum_probs=36.6

Q ss_pred             EEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHh
Q 025509            2 DIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVK   46 (251)
Q Consensus         2 ~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~   46 (251)
                      +|.|.|+ |.+|..+|..++..|++|.+.+++++.+++..+.+.+
T Consensus         1 ~V~ViGa-G~mG~~iA~~~a~~G~~V~l~d~~~~~l~~~~~~i~~   44 (180)
T PF02737_consen    1 KVAVIGA-GTMGRGIAALFARAGYEVTLYDRSPEALERARKRIER   44 (180)
T ss_dssp             EEEEES--SHHHHHHHHHHHHTTSEEEEE-SSHHHHHHHHHHHHH
T ss_pred             CEEEEcC-CHHHHHHHHHHHhCCCcEEEEECChHHHHhhhhHHHH
Confidence            4778887 9999999999999999999999999888777766654

1.1.35 from EC) (HCDH) [] is an enzyme involved in fatty acid metabolism, it catalyzes the reduction of 3-hydroxyacyl-CoA to 3-oxoacyl-CoA. Most eukaryotic cells have 2 fatty-acid beta-oxidation systems, one located in mitochondria and the other in peroxisomes. In peroxisomes 3-hydroxyacyl-CoA dehydrogenase forms, with enoyl-CoA hydratase (ECH) and 3,2-trans-enoyl-CoA isomerase (ECI) a multifunctional enzyme where the N-terminal domain bears the hydratase/isomerase activities and the C-terminal domain the dehydrogenase activity. There are two mitochondrial enzymes: one which is monofunctional and the other which is, like its peroxisomal counterpart, multifunctional. In Escherichia coli (gene fadB) and Pseudomonas fragi (gene faoA) HCDH is part of a multifunctional enzyme which also contains an ECH/ECI domain as well as a 3-hydroxybutyryl-CoA epimerase domain []. There are two major regions of similarity in the sequences of proteins of the HCDH family, the first one located in the N-terminal, corresponds to the NAD-binding site, the second one is located in the centre of the sequence. This represents the C-terminal domain which is also found in lambda crystallin. Some proteins include two copies of this domain.; GO: 0003857 3-hydroxyacyl-CoA dehydrogenase activity, 0016491 oxidoreductase activity, 0006631 fatty acid metabolic process, 0055114 oxidation-reduction process; PDB: 3K6J_A 1ZCJ_A 2X58_A 1ZEJ_A 3HDH_B 2WTB_A 1WDL_B 2D3T_B 1WDK_A 1WDM_B ....

>PLN00203 glutamyl-tRNA reductase

Probab=96.05  E-value=0.035  Score=51.20  Aligned_cols=43  Identities=19%  Similarity=0.315  Sum_probs=36.9

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCC-EEEEEecCchhHHHHHHHH
Q 025509            1 MDIVITGATSGIGTETARVLALRGV-HVVMGVRDIAAGKDVKETI   44 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~-~Vi~~~r~~~~~~~~~~~~   44 (251)
                      ++|+|.|+ |.+|.++++.|...|+ +|+++.|+.++++.+.+++
T Consensus       267 kkVlVIGA-G~mG~~~a~~L~~~G~~~V~V~nRs~era~~La~~~  310 (519)
T PLN00203        267 ARVLVIGA-GKMGKLLVKHLVSKGCTKMVVVNRSEERVAALREEF  310 (519)
T ss_pred             CEEEEEeC-HHHHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHh
Confidence            46899998 9999999999999997 7999999988877766543

>TIGR02818 adh_III_F_hyde S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase

Probab=96.02  E-value=0.064  Score=47.25  Aligned_cols=77  Identities=10%  Similarity=0.069  Sum_probs=50.4

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCC-EEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCC-HHHHHHHHHHHHhcCC
Q 025509            1 MDIVITGATSGIGTETARVLALRGV-HVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSS-LASVRNFASEYNIQHH   78 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~-~~~i~~~~~~~~~~~g   78 (251)
                      ++|||+|+ ++||...+..+...|+ +|+.+++++++.+.+ +++     +...   ..|..+ .+.+.+.+.++..  +
T Consensus       187 ~~VlV~G~-G~iG~~a~q~Ak~~G~~~Vi~~~~~~~~~~~a-~~~-----Ga~~---~i~~~~~~~~~~~~v~~~~~--~  254 (368)
T TIGR02818       187 DTVAVFGL-GGIGLSVIQGARMAKASRIIAIDINPAKFELA-KKL-----GATD---CVNPNDYDKPIQEVIVEITD--G  254 (368)
T ss_pred             CEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH-HHh-----CCCe---EEcccccchhHHHHHHHHhC--C
Confidence            36899975 8999999988888898 799999887765554 223     3321   223332 2333343444332  3


Q ss_pred             CeeEEEEcCCC
Q 025509           79 QLNILINNAGI   89 (251)
Q Consensus        79 ~id~lv~~ag~   89 (251)
                      ++|++|.++|.
T Consensus       255 g~d~vid~~G~  265 (368)
T TIGR02818       255 GVDYSFECIGN  265 (368)
T ss_pred             CCCEEEECCCC
Confidence            69999999983

The members of this protein family show dual function. First, they remove formaldehyde, a toxic metabolite, by acting as S-(hydroxymethyl)glutathione dehydrogenase (1.1.1.284). S-(hydroxymethyl)glutathione can form spontaneously from formaldehyde and glutathione, and so this enzyme previously was designated glutathione-dependent formaldehyde dehydrogenase. These same proteins are also designated alcohol dehydrogenase (EC 1.1.1.1) of class III, for activities that do not require glutathione; they tend to show poor activity for ethanol among their various substrate alcohols.

>PRK09310 aroDE bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase protein; Reviewed

Probab=96.02  E-value=0.016  Score=52.98  Aligned_cols=42  Identities=24%  Similarity=0.322  Sum_probs=35.9

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHH
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKET   43 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~   43 (251)
                      |+++|+|+ ||+|++++..|++.|++|++.+|+.++.++..+.
T Consensus       333 k~vlIiGa-GgiG~aia~~L~~~G~~V~i~~R~~~~~~~la~~  374 (477)
T PRK09310        333 QHVAIVGA-GGAAKAIATTLARAGAELLIFNRTKAHAEALASR  374 (477)
T ss_pred             CEEEEEcC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH
Confidence            47899996 7999999999999999999999988776665543

>cd08244 MDR_enoyl_red Possible enoyl reductase

Probab=96.00  E-value=0.052  Score=46.39  Aligned_cols=76  Identities=16%  Similarity=0.214  Sum_probs=50.2

Q ss_pred             EEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCee
Q 025509            2 DIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQLN   81 (251)
Q Consensus         2 ~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~id   81 (251)
                      .++|+|+++++|.+++..+...|++|+.++++.++.+.+ +++     +..  . ..|..+.+..+.+.+ .. ...++|
T Consensus       145 ~vlI~g~~~~~g~~~~~la~~~g~~v~~~~~~~~~~~~~-~~~-----g~~--~-~~~~~~~~~~~~~~~-~~-~~~~~d  213 (324)
T cd08244         145 VVLVTAAAGGLGSLLVQLAKAAGATVVGAAGGPAKTALV-RAL-----GAD--V-AVDYTRPDWPDQVRE-AL-GGGGVT  213 (324)
T ss_pred             EEEEEcCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-HHc-----CCC--E-EEecCCccHHHHHHH-Hc-CCCCce
Confidence            689999999999999998889999999998887665443 222     221  1 224444333333322 21 112699


Q ss_pred             EEEEcCC
Q 025509           82 ILINNAG   88 (251)
Q Consensus        82 ~lv~~ag   88 (251)
                      +++++.|
T Consensus       214 ~vl~~~g  220 (324)
T cd08244         214 VVLDGVG  220 (324)
T ss_pred             EEEECCC
Confidence            9999887

Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydr

>COG2085 Predicted dinucleotide-binding enzymes [General function prediction only]

Probab=95.97  E-value=0.069  Score=42.99  Aligned_cols=74  Identities=20%  Similarity=0.191  Sum_probs=48.0

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecC-chhHHHHHHHHHh---------hCCCCceEEEEecCCCHHHHHHHH
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRD-IAAGKDVKETIVK---------EIPSAKVDAMELDLSSLASVRNFA   70 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~-~~~~~~~~~~~~~---------~~~~~~v~~~~~D~~~~~~i~~~~   70 (251)
                      |.....||+|-||.+++++|++.|++|++..|+ +++...+.+.+..         +...+++.++.+..   +.+..+.
T Consensus         1 m~~~~i~GtGniG~alA~~~a~ag~eV~igs~r~~~~~~a~a~~l~~~i~~~~~~dA~~~aDVVvLAVP~---~a~~~v~   77 (211)
T COG2085           1 MMIIAIIGTGNIGSALALRLAKAGHEVIIGSSRGPKALAAAAAALGPLITGGSNEDAAALADVVVLAVPF---EAIPDVL   77 (211)
T ss_pred             CcEEEEeccChHHHHHHHHHHhCCCeEEEecCCChhHHHHHHHhhccccccCChHHHHhcCCEEEEeccH---HHHHhHH
Confidence            345677889999999999999999999988654 4444444444422         11135566666555   4445555


Q ss_pred             HHHHhcC
Q 025509           71 SEYNIQH   77 (251)
Q Consensus        71 ~~~~~~~   77 (251)
                      .++....
T Consensus        78 ~~l~~~~   84 (211)
T COG2085          78 AELRDAL   84 (211)
T ss_pred             HHHHHHh
Confidence            5555444

>TIGR01381 E1_like_apg7 E1-like protein-activating enzyme Gsa7p/Apg7p

Probab=95.92  E-value=0.046  Score=51.18  Aligned_cols=57  Identities=21%  Similarity=0.373  Sum_probs=41.2

Q ss_pred             EEEEECCCChhHHHHHHHHHHcCC-EEEEEecCc----------------------hhHHHHHHHHHhhCCCCceEEEEe
Q 025509            2 DIVITGATSGIGTETARVLALRGV-HVVMGVRDI----------------------AAGKDVKETIVKEIPSAKVDAMEL   58 (251)
Q Consensus         2 ~vlItG~s~gIG~a~a~~l~~~G~-~Vi~~~r~~----------------------~~~~~~~~~~~~~~~~~~v~~~~~   58 (251)
                      +|||.|+ ||+|..+|+.|+..|. ++++++.+.                      .+++.+.+.+++.+|..++..+..
T Consensus       340 kVLIvGa-GGLGs~VA~~La~~GVg~ItlVD~D~Ve~SNL~RQ~Lf~~~Dv~~~Gk~KA~aAa~~Lk~InP~v~i~~~~~  418 (664)
T TIGR01381       340 KVLLLGA-GTLGCNVARCLIGWGVRHITFVDNGKVSYSNPVRQSLSNFEDCLLGGRGKAETAQKALKRIFPSIQATGHRL  418 (664)
T ss_pred             eEEEECC-cHHHHHHHHHHHHcCCCeEEEEcCCEECCCccccccccchhhhhhcCCcHHHHHHHHHHHHCCCcEEEEeee
Confidence            5777764 7999999999999998 788887542                      234445666666677666666655


Q ss_pred             c
Q 025509           59 D   59 (251)
Q Consensus        59 D   59 (251)
                      .
T Consensus       419 ~  419 (664)
T TIGR01381       419 T  419 (664)
T ss_pred             e
Confidence            5

This model represents a family of eukaryotic proteins found in animals, plants, and yeasts, including Apg7p (YHR171W) from Saccharomyces cerevisiae and GSA7 from Pichia pastoris. Members are about 650 to 700 residues in length and include a central domain of about 150 residues shared with the ThiF/MoeB/HesA family of proteins. A low level of similarity to ubiquitin-activating enzyme E1 is described in a paper on peroxisome autophagy mediated by GSA7, and is the basis of the name ubiquitin activating enzyme E1-like protein. Members of the family appear to be involved in protein lipidation events analogous to ubiquitination and required for membrane fusion events during autophagy.

>cd08239 THR_DH_like L-threonine dehydrogenase (TDH)-like

Probab=95.92  E-value=0.057  Score=46.73  Aligned_cols=75  Identities=12%  Similarity=0.137  Sum_probs=48.8

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCE-EEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCC
Q 025509            1 MDIVITGATSGIGTETARVLALRGVH-VVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQ   79 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~-Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~   79 (251)
                      +++||+|+ |++|..++..+...|++ |+++++++++.+.+ .++     +..   ...|..+.+ .+++.+ +.. ..+
T Consensus       165 ~~vlV~G~-G~vG~~~~~~ak~~G~~~vi~~~~~~~~~~~~-~~~-----ga~---~~i~~~~~~-~~~~~~-~~~-~~~  231 (339)
T cd08239         165 DTVLVVGA-GPVGLGALMLARALGAEDVIGVDPSPERLELA-KAL-----GAD---FVINSGQDD-VQEIRE-LTS-GAG  231 (339)
T ss_pred             CEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHH-HHh-----CCC---EEEcCCcch-HHHHHH-HhC-CCC
Confidence            36899976 89999999988889998 99998887665443 333     332   123444333 333322 211 226


Q ss_pred             eeEEEEcCC
Q 025509           80 LNILINNAG   88 (251)
Q Consensus        80 id~lv~~ag   88 (251)
                      +|++|.+.|
T Consensus       232 ~d~vid~~g  240 (339)
T cd08239         232 ADVAIECSG  240 (339)
T ss_pred             CCEEEECCC
Confidence            999999987

MDR/AHD-like proteins, including a protein annotated as a threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)-dependent oxidation. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Zinc-dependent ADHs are medium chain dehydrogenase/reductase type proteins (MDRs) and have a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. In addition to alcohol dehydrogenases, this group includes quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc at

>PRK08306 dipicolinate synthase subunit A; Reviewed

Probab=95.87  E-value=0.042  Score=47.04  Aligned_cols=36  Identities=28%  Similarity=0.397  Sum_probs=31.6

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhH
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAG   37 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~   37 (251)
                      ++++|.|. |++|+.++..|...|++|.+.+|++...
T Consensus       153 ~kvlViG~-G~iG~~~a~~L~~~Ga~V~v~~r~~~~~  188 (296)
T PRK08306        153 SNVLVLGF-GRTGMTLARTLKALGANVTVGARKSAHL  188 (296)
T ss_pred             CEEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHH
Confidence            47899997 6799999999999999999999986543

>PRK14852 hypothetical protein; Provisional

Probab=95.84  E-value=0.086  Score=51.74  Aligned_cols=78  Identities=15%  Similarity=0.283  Sum_probs=54.8

Q ss_pred             EEEEECCCChhHHHHHHHHHHcCC-EEEEEecCc-------------------hhHHHHHHHHHhhCCCCceEEEEecCC
Q 025509            2 DIVITGATSGIGTETARVLALRGV-HVVMGVRDI-------------------AAGKDVKETIVKEIPSAKVDAMELDLS   61 (251)
Q Consensus         2 ~vlItG~s~gIG~a~a~~l~~~G~-~Vi~~~r~~-------------------~~~~~~~~~~~~~~~~~~v~~~~~D~~   61 (251)
                      +|+|.| -||+|..+++.|+..|. ++.+++.+.                   .|++-+++.+.+..|..++..+...++
T Consensus       334 rVlVvG-lGGlGs~ia~~LAraGVG~I~L~D~D~Ve~SNLNRQ~l~~~~dIG~~Kaevaa~~l~~INP~v~I~~~~~~I~  412 (989)
T PRK14852        334 RVAIAG-LGGVGGIHLMTLARTGIGNFNLADFDAYSPVNLNRQYGASIASFGRGKLDVMTERALSVNPFLDIRSFPEGVA  412 (989)
T ss_pred             cEEEEC-CcHHHHHHHHHHHHcCCCeEEEEcCCEecccccccccCCChhhCCChHHHHHHHHHHHHCCCCeEEEEecCCC
Confidence            588887 56999999999999998 788887652                   245556666777777777777766664


Q ss_pred             CHHHHHHHHHHHHhcCCCeeEEEEcCC
Q 025509           62 SLASVRNFASEYNIQHHQLNILINNAG   88 (251)
Q Consensus        62 ~~~~i~~~~~~~~~~~g~id~lv~~ag   88 (251)
                       .+.+.++++       .+|+||.+.-
T Consensus       413 -~en~~~fl~-------~~DiVVDa~D  431 (989)
T PRK14852        413 -AETIDAFLK-------DVDLLVDGID  431 (989)
T ss_pred             -HHHHHHHhh-------CCCEEEECCC
Confidence             344554443       5677776553

>PRK08293 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=95.82  E-value=0.2  Score=42.59  Aligned_cols=42  Identities=24%  Similarity=0.271  Sum_probs=35.4

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHH
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKET   43 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~   43 (251)
                      ++|.|.|+ |-+|.++|..|++.|++|++.+++++.+++..+.
T Consensus         4 ~kIaViGa-G~mG~~iA~~la~~G~~V~l~d~~~~~l~~~~~~   45 (287)
T PRK08293          4 KNVTVAGA-GVLGSQIAFQTAFHGFDVTIYDISDEALEKAKER   45 (287)
T ss_pred             cEEEEECC-CHHHHHHHHHHHhcCCeEEEEeCCHHHHHHHHHH
Confidence            35778875 8899999999999999999999998877666544

>cd08289 MDR_yhfp_like Yhfp putative quinone oxidoreductases

Probab=95.80  E-value=0.041  Score=47.13  Aligned_cols=39  Identities=31%  Similarity=0.476  Sum_probs=33.9

Q ss_pred             EEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHH
Q 025509            2 DIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDV   40 (251)
Q Consensus         2 ~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~   40 (251)
                      ++||.|+++++|.+++..+...|++|+.+.+++++.+.+
T Consensus       149 ~vlI~g~~g~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~  187 (326)
T cd08289         149 PVLVTGATGGVGSLAVSILAKLGYEVVASTGKADAADYL  187 (326)
T ss_pred             EEEEEcCCchHHHHHHHHHHHCCCeEEEEecCHHHHHHH
Confidence            799999999999999998888999999999887665444

yhfp putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH

>PRK13982 bifunctional SbtC-like/phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Provisional

Probab=95.80  E-value=0.044  Score=49.79  Aligned_cols=73  Identities=16%  Similarity=0.136  Sum_probs=49.7

Q ss_pred             CEEEEECC----------------CChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHH
Q 025509            1 MDIVITGA----------------TSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLA   64 (251)
Q Consensus         1 k~vlItG~----------------s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~   64 (251)
                      |+||||+|                ||-.|+++|++++.+|++|.++.-....          .. ...+.++.  +.+.+
T Consensus       257 kkvLITaGpT~E~IDpVR~ItN~SSGkmG~alA~aa~~~GA~VtlI~Gp~~~----------~~-p~~v~~i~--V~ta~  323 (475)
T PRK13982        257 RRVLITAGPTHEPIDPVRYIANRSSGKQGFAIAAAAAAAGAEVTLISGPVDL----------AD-PQGVKVIH--VESAR  323 (475)
T ss_pred             CEEEEecCCccccCCcceeeCCCCchHHHHHHHHHHHHCCCcEEEEeCCcCC----------CC-CCCceEEE--ecCHH
Confidence            46788865                5789999999999999999988743210          01 33466554  44455


Q ss_pred             HHHHHHHHHHhcCCCeeEEEEcCCCC
Q 025509           65 SVRNFASEYNIQHHQLNILINNAGIM   90 (251)
Q Consensus        65 ~i~~~~~~~~~~~g~id~lv~~ag~~   90 (251)
                      ++.+.+.+.   . +.|++|++|++.
T Consensus       324 eM~~av~~~---~-~~Di~I~aAAVa  345 (475)
T PRK13982        324 QMLAAVEAA---L-PADIAIFAAAVA  345 (475)
T ss_pred             HHHHHHHhh---C-CCCEEEEecccc
Confidence            555544433   3 369999999964

>cd08300 alcohol_DH_class_III class III alcohol dehydrogenases

Probab=95.77  E-value=0.082  Score=46.48  Aligned_cols=76  Identities=8%  Similarity=0.066  Sum_probs=51.3

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCC-EEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCH-HHHHHHHHHHHhcCC
Q 025509            1 MDIVITGATSGIGTETARVLALRGV-HVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSL-ASVRNFASEYNIQHH   78 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~-~~i~~~~~~~~~~~g   78 (251)
                      .+|||.|+ +++|...+..+...|+ +|+.+++++++.+.+ +++     +... +  .|..+. +++.+.+.++..  +
T Consensus       188 ~~VlV~G~-G~vG~~a~~~ak~~G~~~vi~~~~~~~~~~~~-~~l-----Ga~~-~--i~~~~~~~~~~~~v~~~~~--~  255 (368)
T cd08300         188 STVAVFGL-GAVGLAVIQGAKAAGASRIIGIDINPDKFELA-KKF-----GATD-C--VNPKDHDKPIQQVLVEMTD--G  255 (368)
T ss_pred             CEEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHH-HHc-----CCCE-E--EcccccchHHHHHHHHHhC--C
Confidence            36899975 8999999999888999 799999988776544 223     3321 1  244332 234444444433  3


Q ss_pred             CeeEEEEcCC
Q 025509           79 QLNILINNAG   88 (251)
Q Consensus        79 ~id~lv~~ag   88 (251)
                      ++|+++.+.|
T Consensus       256 g~d~vid~~g  265 (368)
T cd08300         256 GVDYTFECIG  265 (368)
T ss_pred             CCcEEEECCC
Confidence            6999999987

Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dim

>TIGR00561 pntA NAD(P) transhydrogenase, alpha subunit

Probab=95.77  E-value=0.1  Score=47.88  Aligned_cols=79  Identities=19%  Similarity=0.213  Sum_probs=52.8

Q ss_pred             EEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCC-------------CHHHHHH
Q 025509            2 DIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLS-------------SLASVRN   68 (251)
Q Consensus         2 ~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~-------------~~~~i~~   68 (251)
                      +++|.|+ |.+|...+..+...|++|++.+++..+.+...+ +     +  ..++..|..             +.+..+.
T Consensus       166 kVlViGa-G~iGl~Aa~~ak~lGA~V~v~d~~~~rle~a~~-l-----G--a~~v~v~~~e~g~~~~gYa~~~s~~~~~~  236 (511)
T TIGR00561       166 KVLVIGA-GVAGLAAIGAANSLGAIVRAFDTRPEVKEQVQS-M-----G--AEFLELDFKEEGGSGDGYAKVMSEEFIAA  236 (511)
T ss_pred             EEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-c-----C--CeEEeccccccccccccceeecCHHHHHH
Confidence            6889985 899999999999999999999998776443332 2     2  333444432             1233333


Q ss_pred             HHHHHHhcCCCeeEEEEcCCC
Q 025509           69 FASEYNIQHHQLNILINNAGI   89 (251)
Q Consensus        69 ~~~~~~~~~g~id~lv~~ag~   89 (251)
                      ..+.+.+.....|++|+++-+
T Consensus       237 ~~~~~~e~~~~~DIVI~Tali  257 (511)
T TIGR00561       237 EMELFAAQAKEVDIIITTALI  257 (511)
T ss_pred             HHHHHHHHhCCCCEEEECccc
Confidence            333444445679999999944

In some species, such as Rhodospirillum rubrum, the alpha chain is replaced by two shorter chains, both with some homology to the full-length alpha chain modeled here. These score below the trusted cutoff.

>cd08243 quinone_oxidoreductase_like_1 Quinone oxidoreductase (QOR)

Probab=95.75  E-value=0.084  Score=44.83  Aligned_cols=74  Identities=15%  Similarity=0.224  Sum_probs=48.4

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      .++||.|+++++|.+++..+...|++|+.+.+++++.+.+ .++     +..  .+..+  .. +..+.+.+.   ..++
T Consensus       144 ~~vlV~ga~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~-----g~~--~~~~~--~~-~~~~~i~~~---~~~~  209 (320)
T cd08243         144 DTLLIRGGTSSVGLAALKLAKALGATVTATTRSPERAALL-KEL-----GAD--EVVID--DG-AIAEQLRAA---PGGF  209 (320)
T ss_pred             CEEEEEcCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-Hhc-----CCc--EEEec--Cc-cHHHHHHHh---CCCc
Confidence            3689999999999999999989999999998887654433 222     222  22112  11 222222222   2469


Q ss_pred             eEEEEcCC
Q 025509           81 NILINNAG   88 (251)
Q Consensus        81 d~lv~~ag   88 (251)
                      |.++.+.|
T Consensus       210 d~vl~~~~  217 (320)
T cd08243         210 DKVLELVG  217 (320)
T ss_pred             eEEEECCC
Confidence            99999887

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.

>PLN02740 Alcohol dehydrogenase-like

Probab=95.74  E-value=0.075  Score=47.02  Aligned_cols=77  Identities=14%  Similarity=0.089  Sum_probs=50.6

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCC-EEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCH-HHHHHHHHHHHhcCC
Q 025509            1 MDIVITGATSGIGTETARVLALRGV-HVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSL-ASVRNFASEYNIQHH   78 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~-~~i~~~~~~~~~~~g   78 (251)
                      ++|||.|+ |+||..++..+...|+ +|+.+++++++.+.+. ++     +... ++  |..+. +.+.+.+.++..  +
T Consensus       200 ~~VlV~G~-G~vG~~a~q~ak~~G~~~Vi~~~~~~~r~~~a~-~~-----Ga~~-~i--~~~~~~~~~~~~v~~~~~--~  267 (381)
T PLN02740        200 SSVAIFGL-GAVGLAVAEGARARGASKIIGVDINPEKFEKGK-EM-----GITD-FI--NPKDSDKPVHERIREMTG--G  267 (381)
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCCCcEEEEcCChHHHHHHH-Hc-----CCcE-EE--ecccccchHHHHHHHHhC--C
Confidence            36899985 8999999998888998 6999998877655543 22     3322 22  33332 233333444332  2


Q ss_pred             CeeEEEEcCCC
Q 025509           79 QLNILINNAGI   89 (251)
Q Consensus        79 ~id~lv~~ag~   89 (251)
                      .+|+++.++|.
T Consensus       268 g~dvvid~~G~  278 (381)
T PLN02740        268 GVDYSFECAGN  278 (381)
T ss_pred             CCCEEEECCCC
Confidence            69999999983

>cd08238 sorbose_phosphate_red L-sorbose-1-phosphate reductase

Probab=95.73  E-value=0.08  Score=47.37  Aligned_cols=86  Identities=8%  Similarity=0.042  Sum_probs=50.2

Q ss_pred             EEEEECCCChhHHHHHHHHHHcCC---EEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCC
Q 025509            2 DIVITGATSGIGTETARVLALRGV---HVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHH   78 (251)
Q Consensus         2 ~vlItG~s~gIG~a~a~~l~~~G~---~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g   78 (251)
                      +++|.|++|++|...+..+...|+   +|+++++++++.+.+.+.+....-.........|..+.+++.+.+.++.. ..
T Consensus       178 ~VlV~G~~G~vG~~aiq~ak~~G~g~~~Vi~~~~~~~r~~~a~~~~~~~~~~~Ga~~~~i~~~~~~~~~~~v~~~t~-g~  256 (410)
T cd08238         178 NTAILGGAGPMGLMAIDYAIHGPIGPSLLVVTDVNDERLARAQRLFPPEAASRGIELLYVNPATIDDLHATLMELTG-GQ  256 (410)
T ss_pred             EEEEEeCCCHHHHHHHHHHHhcccCCceEEEEcCCHHHHHHHHHhccccccccCceEEEECCCccccHHHHHHHHhC-CC
Confidence            689999999999998887666553   79999998887665543210000000112122343332334343433322 23


Q ss_pred             CeeEEEEcCC
Q 025509           79 QLNILINNAG   88 (251)
Q Consensus        79 ~id~lv~~ag   88 (251)
                      ++|++|.++|
T Consensus       257 g~D~vid~~g  266 (410)
T cd08238         257 GFDDVFVFVP  266 (410)
T ss_pred             CCCEEEEcCC
Confidence            6899999886

L-sorbose-1-phosphate reductase, a member of the MDR family, catalyzes the NADPH-dependent conversion of l-sorbose 1-phosphate to d-glucitol 6-phosphate in the metabolism of L-sorbose to (also converts d-fructose 1-phosphate to d-mannitol 6-phosphate). The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the found

>COG0373 HemA Glutamyl-tRNA reductase [Coenzyme metabolism]

Probab=95.68  E-value=0.096  Score=46.67  Aligned_cols=43  Identities=21%  Similarity=0.482  Sum_probs=37.6

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCC-EEEEEecCchhHHHHHHHH
Q 025509            1 MDIVITGATSGIGTETARVLALRGV-HVVMGVRDIAAGKDVKETI   44 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~-~Vi~~~r~~~~~~~~~~~~   44 (251)
                      +++||.|+ |-+|.-+|++|+++|. +|+++.|+..+++++++++
T Consensus       179 ~~vlvIGA-Gem~~lva~~L~~~g~~~i~IaNRT~erA~~La~~~  222 (414)
T COG0373         179 KKVLVIGA-GEMGELVAKHLAEKGVKKITIANRTLERAEELAKKL  222 (414)
T ss_pred             CeEEEEcc-cHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHh
Confidence            46888876 5799999999999995 8999999999999988876

>cd08292 ETR_like_2 2-enoyl thioester reductase (ETR) like proteins, child 2

Probab=95.68  E-value=0.046  Score=46.73  Aligned_cols=76  Identities=16%  Similarity=0.223  Sum_probs=49.4

Q ss_pred             EEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCee
Q 025509            2 DIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQLN   81 (251)
Q Consensus         2 ~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~id   81 (251)
                      ++||.|+++++|.+++......|++|+.+.++.++.+.+.+ +     +.. .++  +..+ ++..+.+.++... .++|
T Consensus       142 ~vlI~g~~g~ig~~~~~~a~~~G~~v~~~~~~~~~~~~~~~-~-----g~~-~~~--~~~~-~~~~~~i~~~~~~-~~~d  210 (324)
T cd08292         142 WLIQNAAGGAVGKLVAMLAAARGINVINLVRRDAGVAELRA-L-----GIG-PVV--STEQ-PGWQDKVREAAGG-APIS  210 (324)
T ss_pred             EEEEcccccHHHHHHHHHHHHCCCeEEEEecCHHHHHHHHh-c-----CCC-EEE--cCCC-chHHHHHHHHhCC-CCCc
Confidence            68999999999999999888899999998887665444432 1     221 112  2222 2233333333221 2699


Q ss_pred             EEEEcCC
Q 025509           82 ILINNAG   88 (251)
Q Consensus        82 ~lv~~ag   88 (251)
                      +++.+.|
T Consensus       211 ~v~d~~g  217 (324)
T cd08292         211 VALDSVG  217 (324)
T ss_pred             EEEECCC
Confidence            9999887

2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordina

>COG2130 Putative NADP-dependent oxidoreductases [General function prediction only]

Probab=95.66  E-value=0.035  Score=47.04  Aligned_cols=103  Identities=15%  Similarity=0.191  Sum_probs=66.8

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCC-C
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHH-Q   79 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g-~   79 (251)
                      .+|+|++|+|.+|.-+.+.-.-+|++|+.++-++++..-+.+++     +-+  . -.|.... ++.+.++   +..+ .
T Consensus       152 etvvVSaAaGaVGsvvgQiAKlkG~rVVGiaGg~eK~~~l~~~l-----GfD--~-~idyk~~-d~~~~L~---~a~P~G  219 (340)
T COG2130         152 ETVVVSAAAGAVGSVVGQIAKLKGCRVVGIAGGAEKCDFLTEEL-----GFD--A-GIDYKAE-DFAQALK---EACPKG  219 (340)
T ss_pred             CEEEEEecccccchHHHHHHHhhCCeEEEecCCHHHHHHHHHhc-----CCc--e-eeecCcc-cHHHHHH---HHCCCC
Confidence            47999999999998777666678999999998887766555544     211  1 1233332 3333333   3333 7


Q ss_pred             eeEEEEcCCCCCCCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccc
Q 025509           80 LNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRL  146 (251)
Q Consensus        80 id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~  146 (251)
                      ||+.+-|.|-         +-++               +.++.|..       .+||+.++-++.+.
T Consensus       220 IDvyfeNVGg---------~v~D---------------Av~~~ln~-------~aRi~~CG~IS~YN  255 (340)
T COG2130         220 IDVYFENVGG---------EVLD---------------AVLPLLNL-------FARIPVCGAISQYN  255 (340)
T ss_pred             eEEEEEcCCc---------hHHH---------------HHHHhhcc-------ccceeeeeehhhcC
Confidence            9999999984         1122               33445543       47899888776654

>TIGR03201 dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase

Probab=95.66  E-value=0.11  Score=45.24  Aligned_cols=39  Identities=21%  Similarity=0.168  Sum_probs=33.5

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHH
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDV   40 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~   40 (251)
                      ++|+|.|+ +++|..++..+...|++|+++++++++.+.+
T Consensus       168 ~~VlV~G~-G~vG~~a~~~a~~~G~~vi~~~~~~~~~~~~  206 (349)
T TIGR03201       168 DLVIVIGA-GGVGGYMVQTAKAMGAAVVAIDIDPEKLEMM  206 (349)
T ss_pred             CEEEEECC-CHHHHHHHHHHHHcCCeEEEEcCCHHHHHHH
Confidence            36899999 9999999998888999999999988776544

Members of this protein family are 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase, an enzyme in the anaerobic metabolism of aromatic enzymes by way of benzoyl-CoA, as seen in Thauera aromatica, Geobacter metallireducens, and Azoarcus sp. The experimentally characterized form from T. aromatica uses only NAD+, not NADP+. Note that Rhodopseudomonas palustris uses a different pathway to perform a similar degradation of benzoyl-CoA to 3-hydroxpimelyl-CoA.

>cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase

Probab=95.58  E-value=0.038  Score=43.21  Aligned_cols=34  Identities=21%  Similarity=0.292  Sum_probs=30.4

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCc
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDI   34 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~   34 (251)
                      |+++|.|++.-+|..+++.|.++|++|.++.|+.
T Consensus        45 k~vlViG~G~~~G~~~a~~L~~~g~~V~v~~r~~   78 (168)
T cd01080          45 KKVVVVGRSNIVGKPLAALLLNRNATVTVCHSKT   78 (168)
T ss_pred             CEEEEECCcHHHHHHHHHHHhhCCCEEEEEECCc
Confidence            5799999977789999999999999999998864

NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a

>cd05295 MDH_like Malate dehydrogenase-like

Probab=95.58  E-value=0.24  Score=44.78  Aligned_cols=115  Identities=12%  Similarity=0.128  Sum_probs=70.5

Q ss_pred             EEEEECCCChhHHHHHHHHHHc---CC----EEEEEec--CchhHHHHHHHHHhhC-CC-CceEEEEecCCCHHHHHHHH
Q 025509            2 DIVITGATSGIGTETARVLALR---GV----HVVMGVR--DIAAGKDVKETIVKEI-PS-AKVDAMELDLSSLASVRNFA   70 (251)
Q Consensus         2 ~vlItG~s~gIG~a~a~~l~~~---G~----~Vi~~~r--~~~~~~~~~~~~~~~~-~~-~~v~~~~~D~~~~~~i~~~~   70 (251)
                      +|+||||+|-||+++.-.+++-   |.    .+++++.  +.+.++...-++.+.. |- ..+.+. .|  +.+.     
T Consensus       125 ~V~vtgAag~i~Y~l~~~ia~G~~fG~~~~v~L~LlDi~~~~~~l~G~amDL~D~a~pll~~v~i~-~~--~~ea-----  196 (452)
T cd05295         125 QVCITNASAPLCYHLIPSLASGEVFGMEEEISIHLLDSPENLEKLKGLVMEVEDLAFPLLRGISVT-TD--LDVA-----  196 (452)
T ss_pred             EEEEecCcHHHHHHHHHHHhCCcccCCCCeEEEEEEcCCCchhhHHHHHHHHHHhHHhhcCCcEEE-EC--CHHH-----
Confidence            5899999999999999999973   42    3677887  6777777777776643 21 122222 21  2222     


Q ss_pred             HHHHhcCCCeeEEEEcCCCCCCCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcC
Q 025509           71 SEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSS  141 (251)
Q Consensus        71 ~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS  141 (251)
                            +...|++|..+|....+.    ++-.+.++.|.    .+++...+.+.+.+.   +..+|+++.|
T Consensus       197 ------~~daDvvIitag~prk~G----~~R~DLL~~N~----~Ifk~~g~~I~~~a~---~~~~VlVv~t  250 (452)
T cd05295         197 ------FKDAHVIVLLDDFLIKEG----EDLEGCIRSRV----AICQLYGPLIEKNAK---EDVKVIVAGR  250 (452)
T ss_pred             ------hCCCCEEEECCCCCCCcC----CCHHHHHHHHH----HHHHHHHHHHHHhCC---CCCeEEEEeC
Confidence                  237999999999754321    22344566664    345555566655432   1235555554

These MDH-like proteins are related to other groups in the MDH family but do not have conserved substrate and cofactor binding residues. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subgroup are uncharacterized MDH-like proteins from animals. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PLN02586 probable cinnamyl alcohol dehydrogenase

Probab=95.55  E-value=0.096  Score=46.02  Aligned_cols=72  Identities=11%  Similarity=0.190  Sum_probs=45.7

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      ++|||.|+ |+||..++..+...|++|++++.+.++..+..+++     +... +  .|..+.+.+.+    .   .+.+
T Consensus       185 ~~VlV~G~-G~vG~~avq~Ak~~Ga~vi~~~~~~~~~~~~~~~~-----Ga~~-v--i~~~~~~~~~~----~---~~~~  248 (360)
T PLN02586        185 KHLGVAGL-GGLGHVAVKIGKAFGLKVTVISSSSNKEDEAINRL-----GADS-F--LVSTDPEKMKA----A---IGTM  248 (360)
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCcchhhhHHHhC-----CCcE-E--EcCCCHHHHHh----h---cCCC
Confidence            36888665 89999999988888999988887765544443332     3321 1  13333322222    1   1358


Q ss_pred             eEEEEcCC
Q 025509           81 NILINNAG   88 (251)
Q Consensus        81 d~lv~~ag   88 (251)
                      |++|.+.|
T Consensus       249 D~vid~~g  256 (360)
T PLN02586        249 DYIIDTVS  256 (360)
T ss_pred             CEEEECCC
Confidence            99999887

>PRK12550 shikimate 5-dehydrogenase; Reviewed

Probab=95.55  E-value=0.038  Score=46.71  Aligned_cols=42  Identities=21%  Similarity=0.358  Sum_probs=35.6

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCC-EEEEEecCchhHHHHHHH
Q 025509            1 MDIVITGATSGIGTETARVLALRGV-HVVMGVRDIAAGKDVKET   43 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~-~Vi~~~r~~~~~~~~~~~   43 (251)
                      ++++|.|+ ||.+++++-.|++.|+ +|.++.|+.++++++.+.
T Consensus       123 ~~vlilGa-GGaarAi~~aL~~~g~~~i~i~nR~~~~a~~la~~  165 (272)
T PRK12550        123 LVVALRGS-GGMAKAVAAALRDAGFTDGTIVARNEKTGKALAEL  165 (272)
T ss_pred             CeEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHH
Confidence            36788885 9999999999999998 699999998887776654

>cd08250 Mgc45594_like Mgc45594 gene product and other MDR family members

Probab=95.53  E-value=0.1  Score=44.72  Aligned_cols=75  Identities=12%  Similarity=0.285  Sum_probs=48.6

Q ss_pred             EEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCee
Q 025509            2 DIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQLN   81 (251)
Q Consensus         2 ~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~id   81 (251)
                      +++|.|+++++|.+++......|++|+.+.++.++.+.+ .++     +.. .++  |..+ .+..+.+.....  +.+|
T Consensus       142 ~vlI~ga~g~ig~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~-----g~~-~v~--~~~~-~~~~~~~~~~~~--~~vd  209 (329)
T cd08250         142 TVLVTAAAGGTGQFAVQLAKLAGCHVIGTCSSDEKAEFL-KSL-----GCD-RPI--NYKT-EDLGEVLKKEYP--KGVD  209 (329)
T ss_pred             EEEEEeCccHHHHHHHHHHHHcCCeEEEEeCcHHHHHHH-HHc-----CCc-eEE--eCCC-ccHHHHHHHhcC--CCCe
Confidence            689999999999999888888899999988876654433 222     221 112  2222 223333333322  3699


Q ss_pred             EEEEcCC
Q 025509           82 ILINNAG   88 (251)
Q Consensus        82 ~lv~~ag   88 (251)
                      .++++.|
T Consensus       210 ~v~~~~g  216 (329)
T cd08250         210 VVYESVG  216 (329)
T ss_pred             EEEECCc
Confidence            9998876

Includes Human Mgc45594 gene product of undetermined function. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.

>cd01490 Ube1_repeat2 Ubiquitin activating enzyme (E1), repeat 2

Probab=95.50  E-value=0.13  Score=46.33  Aligned_cols=59  Identities=20%  Similarity=0.325  Sum_probs=41.8

Q ss_pred             EEEEECCCChhHHHHHHHHHHcCC------EEEEEecCch-------------------hHHHHHHHHHhhCCCCceEEE
Q 025509            2 DIVITGATSGIGTETARVLALRGV------HVVMGVRDIA-------------------AGKDVKETIVKEIPSAKVDAM   56 (251)
Q Consensus         2 ~vlItG~s~gIG~a~a~~l~~~G~------~Vi~~~r~~~-------------------~~~~~~~~~~~~~~~~~v~~~   56 (251)
                      +|+|.| .||||.++++.|+..|.      ++.+++.+.-                   +.+-+.+.+.+..|..++..+
T Consensus         1 kVlvVG-aGGlGcE~lKnLal~Gv~~g~~G~I~IvD~D~Ie~SNLnRQfLf~~~dIGk~Ka~vAa~~l~~lNp~v~I~a~   79 (435)
T cd01490           1 KVFLVG-AGAIGCELLKNFALMGVGTGESGEITVTDMDNIEKSNLNRQFLFRPHDVGKPKSEVAAAAVKAMNPDLKITAL   79 (435)
T ss_pred             CEEEEC-CCHHHHHHHHHHHHcCCCcCCCCeEEEECCCCccccccCcCccCChhHcCcHHHHHHHHHHHHHCCCCEEEEE
Confidence            367787 67999999999999997      7888876522                   344445556666666666666


Q ss_pred             EecCC
Q 025509           57 ELDLS   61 (251)
Q Consensus        57 ~~D~~   61 (251)
                      ...+.
T Consensus        80 ~~~v~   84 (435)
T cd01490          80 QNRVG   84 (435)
T ss_pred             ecccC
Confidence            65554

E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Ubiquitin-E1 is a single-chain protein with a weakly conserved two-fold repeat. This CD represents the second repeat of Ub-E1.

>cd08301 alcohol_DH_plants Plant alcohol dehydrogenase

Probab=95.47  E-value=0.13  Score=45.18  Aligned_cols=75  Identities=12%  Similarity=0.156  Sum_probs=49.5

Q ss_pred             EEEEECCCChhHHHHHHHHHHcCC-EEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCH-HHHHHHHHHHHhcCCC
Q 025509            2 DIVITGATSGIGTETARVLALRGV-HVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSL-ASVRNFASEYNIQHHQ   79 (251)
Q Consensus         2 ~vlItG~s~gIG~a~a~~l~~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~-~~i~~~~~~~~~~~g~   79 (251)
                      +|||.|+ +++|..+++.+...|+ +|+.+++++++.+.+ +++     +... +  .|..+. +++.+.+.++..  +.
T Consensus       190 ~VlV~G~-g~vG~~a~q~ak~~G~~~vi~~~~~~~~~~~~-~~~-----Ga~~-~--i~~~~~~~~~~~~v~~~~~--~~  257 (369)
T cd08301         190 TVAIFGL-GAVGLAVAEGARIRGASRIIGVDLNPSKFEQA-KKF-----GVTE-F--VNPKDHDKPVQEVIAEMTG--GG  257 (369)
T ss_pred             EEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH-HHc-----CCce-E--EcccccchhHHHHHHHHhC--CC
Confidence            6899975 8999999988888898 799999987665543 222     3321 1  133321 344444544433  26


Q ss_pred             eeEEEEcCC
Q 025509           80 LNILINNAG   88 (251)
Q Consensus        80 id~lv~~ag   88 (251)
                      +|+++.+.|
T Consensus       258 ~d~vid~~G  266 (369)
T cd08301         258 VDYSFECTG  266 (369)
T ss_pred             CCEEEECCC
Confidence            999999987

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ in the

>cd08241 QOR1 Quinone oxidoreductase (QOR)

Probab=95.45  E-value=0.087  Score=44.59  Aligned_cols=40  Identities=15%  Similarity=0.259  Sum_probs=33.8

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHH
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDV   40 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~   40 (251)
                      ++++|+|+++++|.+++..+...|+.|+.+.++.++.+.+
T Consensus       141 ~~vli~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~  180 (323)
T cd08241         141 ETVLVLGAAGGVGLAAVQLAKALGARVIAAASSEEKLALA  180 (323)
T ss_pred             CEEEEEcCCchHHHHHHHHHHHhCCEEEEEeCCHHHHHHH
Confidence            3689999999999999999999999999998876554433

QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic

>cd08246 crotonyl_coA_red crotonyl-CoA reductase

Probab=95.44  E-value=0.15  Score=45.30  Aligned_cols=39  Identities=21%  Similarity=0.331  Sum_probs=33.1

Q ss_pred             EEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHH
Q 025509            2 DIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDV   40 (251)
Q Consensus         2 ~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~   40 (251)
                      +++|+|+++++|.+++..+...|++++++.+++++.+.+
T Consensus       196 ~vlV~ga~g~iG~a~~~lak~~G~~vv~~~~s~~~~~~~  234 (393)
T cd08246         196 NVLIWGASGGLGSMAIQLARAAGANPVAVVSSEEKAEYC  234 (393)
T ss_pred             EEEEECCCcHHHHHHHHHHHHcCCeEEEEeCCHHHHHHH
Confidence            689999999999999988888999988888877665544

Crotonyl-CoA reductase, a member of the medium chain dehydrogenase/reductase family, catalyzes the NADPH-dependent conversion of crotonyl-CoA to butyryl-CoA, a step in (2S)-methylmalonyl-CoA production for straight-chain fatty acid biosynthesis. Like enoyl reductase, another enzyme in fatty acid synthesis, crotonyl-CoA reductase is a member of the zinc-dependent alcohol dehydrogenase-like medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossma

>PTZ00354 alcohol dehydrogenase; Provisional

Probab=95.43  E-value=0.17  Score=43.30  Aligned_cols=77  Identities=14%  Similarity=0.216  Sum_probs=48.8

Q ss_pred             EEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCee
Q 025509            2 DIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQLN   81 (251)
Q Consensus         2 ~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~id   81 (251)
                      +++|.|+++++|.+++..+...|++++++.+++++.+.+. ++     +.. .+  .|..+.+...+.+.+... ..++|
T Consensus       143 ~vlI~ga~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~-----g~~-~~--~~~~~~~~~~~~~~~~~~-~~~~d  212 (334)
T PTZ00354        143 SVLIHAGASGVGTAAAQLAEKYGAATIITTSSEEKVDFCK-KL-----AAI-IL--IRYPDEEGFAPKVKKLTG-EKGVN  212 (334)
T ss_pred             EEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-Hc-----CCc-EE--EecCChhHHHHHHHHHhC-CCCce
Confidence            6899999999999999999999999888888766544442 12     221 11  223332222222232221 13699


Q ss_pred             EEEEcCC
Q 025509           82 ILINNAG   88 (251)
Q Consensus        82 ~lv~~ag   88 (251)
                      .++.+.|
T Consensus       213 ~~i~~~~  219 (334)
T PTZ00354        213 LVLDCVG  219 (334)
T ss_pred             EEEECCc
Confidence            9998876

>PRK09260 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=95.40  E-value=0.31  Score=41.47  Aligned_cols=42  Identities=19%  Similarity=0.259  Sum_probs=36.3

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHH
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKET   43 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~   43 (251)
                      ++|.|.|+ |-+|..+|..|++.|++|++.+++++.+++..+.
T Consensus         2 ~~V~VIG~-G~mG~~iA~~la~~G~~V~~~d~~~~~~~~~~~~   43 (288)
T PRK09260          2 EKLVVVGA-GVMGRGIAYVFAVSGFQTTLVDIKQEQLESAQQE   43 (288)
T ss_pred             cEEEEECc-cHHHHHHHHHHHhCCCcEEEEeCCHHHHHHHHHH
Confidence            46888887 8899999999999999999999998887776543

>PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related

Probab=95.37  E-value=0.07  Score=42.05  Aligned_cols=37  Identities=27%  Similarity=0.255  Sum_probs=31.1

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHH
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGK   38 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~   38 (251)
                      |++.|.|. |.||+++|+.|...|++|+..+|+.....
T Consensus        37 ~tvgIiG~-G~IG~~vA~~l~~fG~~V~~~d~~~~~~~   73 (178)
T PF02826_consen   37 KTVGIIGY-GRIGRAVARRLKAFGMRVIGYDRSPKPEE   73 (178)
T ss_dssp             SEEEEEST-SHHHHHHHHHHHHTT-EEEEEESSCHHHH
T ss_pred             CEEEEEEE-cCCcCeEeeeeecCCceeEEecccCChhh
Confidence            57888865 89999999999999999999999876544

All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A ....

>PRK14192 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.33  E-value=0.065  Score=45.54  Aligned_cols=33  Identities=18%  Similarity=0.207  Sum_probs=29.4

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecC
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRD   33 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~   33 (251)
                      |+++|.|.|+-.|++++..|.++|++|.++.|.
T Consensus       160 k~vvViG~gg~vGkpia~~L~~~gatVtv~~~~  192 (283)
T PRK14192        160 KHAVVVGRSAILGKPMAMMLLNANATVTICHSR  192 (283)
T ss_pred             CEEEEECCcHHHHHHHHHHHHhCCCEEEEEeCC
Confidence            579999999889999999999999998887773

>cd08230 glucose_DH Glucose dehydrogenase

Probab=95.33  E-value=0.093  Score=45.85  Aligned_cols=71  Identities=24%  Similarity=0.335  Sum_probs=45.2

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecC---chhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcC
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRD---IAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQH   77 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~---~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~   77 (251)
                      ++|+|+|+ |++|...+..+...|++|++++|+   +++.+ ..+++     +..  .  +|..+ +++.+    .. ..
T Consensus       174 ~~vlI~G~-G~vG~~a~q~ak~~G~~vi~~~~~~~~~~~~~-~~~~~-----Ga~--~--v~~~~-~~~~~----~~-~~  236 (355)
T cd08230         174 RRALVLGA-GPIGLLAALLLRLRGFEVYVLNRRDPPDPKAD-IVEEL-----GAT--Y--VNSSK-TPVAE----VK-LV  236 (355)
T ss_pred             CEEEEECC-CHHHHHHHHHHHHcCCeEEEEecCCCCHHHHH-HHHHc-----CCE--E--ecCCc-cchhh----hh-hc
Confidence            36899985 999999998888889999999984   33333 22222     333  2  23332 22222    11 12


Q ss_pred             CCeeEEEEcCC
Q 025509           78 HQLNILINNAG   88 (251)
Q Consensus        78 g~id~lv~~ag   88 (251)
                      +.+|++|.++|
T Consensus       237 ~~~d~vid~~g  247 (355)
T cd08230         237 GEFDLIIEATG  247 (355)
T ss_pred             CCCCEEEECcC
Confidence            47999999998

Glucose dehydrogenase (GlcDH), a member of the medium chain dehydrogenase/zinc-dependent alcohol dehydrogenase-like family, catalyzes the NADP(+)-dependent oxidation of glucose to gluconate, the first step in the Entner-Doudoroff pathway, an alternative to or substitute for glycolysis or the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossman fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contai

>cd05282 ETR_like 2-enoyl thioester reductase-like

Probab=95.28  E-value=0.081  Score=45.16  Aligned_cols=76  Identities=16%  Similarity=0.197  Sum_probs=49.1

Q ss_pred             EEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCee
Q 025509            2 DIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQLN   81 (251)
Q Consensus         2 ~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~id   81 (251)
                      +++|.|+++++|.++++.+...|++|+++.++.++.+.+ .++     +..   ...|..+.....+ +.+.. ...++|
T Consensus       141 ~vlI~g~~~~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~-----g~~---~~~~~~~~~~~~~-~~~~~-~~~~~d  209 (323)
T cd05282         141 WVIQNAANSAVGRMLIQLAKLLGFKTINVVRRDEQVEEL-KAL-----GAD---EVIDSSPEDLAQR-VKEAT-GGAGAR  209 (323)
T ss_pred             EEEEcccccHHHHHHHHHHHHCCCeEEEEecChHHHHHH-Hhc-----CCC---EEecccchhHHHH-HHHHh-cCCCce
Confidence            689999999999999999999999999988887654433 222     221   1123333222222 22222 123699


Q ss_pred             EEEEcCC
Q 025509           82 ILINNAG   88 (251)
Q Consensus        82 ~lv~~ag   88 (251)
                      .++.+.|
T Consensus       210 ~vl~~~g  216 (323)
T cd05282         210 LALDAVG  216 (323)
T ss_pred             EEEECCC
Confidence            9999887

2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossman

>PLN02178 cinnamyl-alcohol dehydrogenase

Probab=95.25  E-value=0.16  Score=44.87  Aligned_cols=71  Identities=14%  Similarity=0.255  Sum_probs=45.2

Q ss_pred             EEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCee
Q 025509            2 DIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQLN   81 (251)
Q Consensus         2 ~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~id   81 (251)
                      +++|.|+ +++|..++......|++|++++++.++..+..+++     +....   .|..+.+.+.    +.   .+++|
T Consensus       181 ~VlV~G~-G~vG~~avq~Ak~~Ga~Vi~~~~~~~~~~~~a~~l-----Ga~~~---i~~~~~~~v~----~~---~~~~D  244 (375)
T PLN02178        181 RLGVNGL-GGLGHIAVKIGKAFGLRVTVISRSSEKEREAIDRL-----GADSF---LVTTDSQKMK----EA---VGTMD  244 (375)
T ss_pred             EEEEEcc-cHHHHHHHHHHHHcCCeEEEEeCChHHhHHHHHhC-----CCcEE---EcCcCHHHHH----Hh---hCCCc
Confidence            6888875 89999999988888999998887755433333322     33211   2333322222    11   13689


Q ss_pred             EEEEcCC
Q 025509           82 ILINNAG   88 (251)
Q Consensus        82 ~lv~~ag   88 (251)
                      +++.++|
T Consensus       245 ~vid~~G  251 (375)
T PLN02178        245 FIIDTVS  251 (375)
T ss_pred             EEEECCC
Confidence            9999987

>KOG2013 consensus SMT3/SUMO-activating complex, catalytic component UBA2 [Posttranslational modification, protein turnover, chaperones]

Probab=95.25  E-value=0.082  Score=47.43  Aligned_cols=79  Identities=20%  Similarity=0.226  Sum_probs=54.2

Q ss_pred             EEEEECCCChhHHHHHHHHHHcCC-EEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcC-CC
Q 025509            2 DIVITGATSGIGTETARVLALRGV-HVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQH-HQ   79 (251)
Q Consensus         2 ~vlItG~s~gIG~a~a~~l~~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~-g~   79 (251)
                      +||+.|| ||||.++-+.|+..|+ .|.+++.+.-.+..+         +-++.|-+-|+....+..  ..++..++ ++
T Consensus        14 riLvVGa-GGIGCELLKnLal~gf~~IhiIDlDTIDlSNL---------NRQFLFrkkhVgqsKA~v--A~~~v~~Fnpn   81 (603)
T KOG2013|consen   14 RILVVGA-GGIGCELLKNLALTGFEEIHIIDLDTIDLSNL---------NRQFLFRKKHVGQSKATV--AAKAVKQFNPN   81 (603)
T ss_pred             eEEEEec-CcccHHHHHHHHHhcCCeeEEEeccceeccch---------hhhheeehhhcCchHHHH--HHHHHHHhCCC
Confidence            4788875 6999999999999999 799998876554443         334566666776555432  22333333 47


Q ss_pred             eeEEEEcCCCCCC
Q 025509           80 LNILINNAGIMGT   92 (251)
Q Consensus        80 id~lv~~ag~~~~   92 (251)
                      ++++-..|.+..+
T Consensus        82 ~~l~~yhanI~e~   94 (603)
T KOG2013|consen   82 IKLVPYHANIKEP   94 (603)
T ss_pred             CceEeccccccCc
Confidence            8888888877554

>cd08297 CAD3 Cinnamyl alcohol dehydrogenases (CAD)

Probab=95.25  E-value=0.16  Score=43.93  Aligned_cols=76  Identities=17%  Similarity=0.112  Sum_probs=49.2

Q ss_pred             EEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCee
Q 025509            2 DIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQLN   81 (251)
Q Consensus         2 ~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~id   81 (251)
                      ++||.|+++++|.+++..+...|++|+.+.+++++.+.+ +++     +..  . ..+..+.+....+.+..  ..+++|
T Consensus       168 ~vlV~g~~~~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~-----g~~--~-v~~~~~~~~~~~~~~~~--~~~~vd  236 (341)
T cd08297         168 WVVISGAGGGLGHLGVQYAKAMGLRVIAIDVGDEKLELA-KEL-----GAD--A-FVDFKKSDDVEAVKELT--GGGGAH  236 (341)
T ss_pred             EEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHH-HHc-----CCc--E-EEcCCCccHHHHHHHHh--cCCCCC
Confidence            689999999999999999999999999999987654433 222     221  1 12333333333322221  123699


Q ss_pred             EEEEcCC
Q 025509           82 ILINNAG   88 (251)
Q Consensus        82 ~lv~~ag   88 (251)
                      +++++.+
T Consensus       237 ~vl~~~~  243 (341)
T cd08297         237 AVVVTAV  243 (341)
T ss_pred             EEEEcCC
Confidence            9998665

These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short cha

>cd08231 MDR_TM0436_like Hypothetical enzyme TM0436 resembles the zinc-dependent alcohol dehydrogenases (ADH)

Probab=95.19  E-value=0.2  Score=43.80  Aligned_cols=79  Identities=14%  Similarity=0.190  Sum_probs=47.1

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCC-EEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCC
Q 025509            1 MDIVITGATSGIGTETARVLALRGV-HVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQ   79 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~   79 (251)
                      +++||+| ++++|.+++..+...|+ +|+++++++++.+.+ +++     +.. .++..+-.+...+.+.+.++.. ..+
T Consensus       179 ~~vlI~g-~g~vG~~~~~lak~~G~~~v~~~~~~~~~~~~~-~~~-----g~~-~vi~~~~~~~~~~~~~i~~~~~-~~~  249 (361)
T cd08231         179 DTVVVQG-AGPLGLYAVAAAKLAGARRVIVIDGSPERLELA-REF-----GAD-ATIDIDELPDPQRRAIVRDITG-GRG  249 (361)
T ss_pred             CEEEEEC-CCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH-HHc-----CCC-eEEcCcccccHHHHHHHHHHhC-CCC
Confidence            3689997 59999999988888899 899998876654433 222     221 1121111111222222333221 236


Q ss_pred             eeEEEEcCC
Q 025509           80 LNILINNAG   88 (251)
Q Consensus        80 id~lv~~ag   88 (251)
                      +|+++.+.|
T Consensus       250 ~d~vid~~g  258 (361)
T cd08231         250 ADVVIEASG  258 (361)
T ss_pred             CcEEEECCC
Confidence            999999987

This group contains the hypothetical TM0436 alcohol dehydrogenase from Thermotoga maritima, proteins annotated as 5-exo-alcohol dehydrogenase, and other members of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. MDR, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quino

>PF00107 ADH_zinc_N: Zinc-binding dehydrogenase; InterPro: IPR013149 Alcohol dehydrogenase (1

Probab=95.16  E-value=0.25  Score=36.25  Aligned_cols=67  Identities=19%  Similarity=0.254  Sum_probs=43.4

Q ss_pred             hhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCeeEEEEcCC
Q 025509           11 GIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQLNILINNAG   88 (251)
Q Consensus        11 gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~id~lv~~ag   88 (251)
                      |||...+..+...|++|+++++++.+.+-+.+ +     +  ...+ .|.++.+ +.+-+.++... .++|++|.|+|
T Consensus         1 ~vG~~a~q~ak~~G~~vi~~~~~~~k~~~~~~-~-----G--a~~~-~~~~~~~-~~~~i~~~~~~-~~~d~vid~~g   67 (130)
T PF00107_consen    1 GVGLMAIQLAKAMGAKVIATDRSEEKLELAKE-L-----G--ADHV-IDYSDDD-FVEQIRELTGG-RGVDVVIDCVG   67 (130)
T ss_dssp             HHHHHHHHHHHHTTSEEEEEESSHHHHHHHHH-T-----T--ESEE-EETTTSS-HHHHHHHHTTT-SSEEEEEESSS
T ss_pred             ChHHHHHHHHHHcCCEEEEEECCHHHHHHHHh-h-----c--cccc-ccccccc-ccccccccccc-ccceEEEEecC
Confidence            68999999998999999999999877554432 2     3  2222 3444433 33323332211 37999999998

1.1.1 from EC) (ADH) catalyzes the reversible oxidation of alcohols to their corresponding acetaldehyde or ketone with the concomitant reduction of NAD: alcohol + NAD = aldehyde or ketone + NADH Currently three structurally and catalytically different types of alcohol dehydrogenases are known: Zinc-containing 'long-chain' alcohol dehydrogenases. Insect-type, or 'short-chain' alcohol dehydrogenases. Iron-containing alcohol dehydrogenases. Zinc-containing ADH's [, ] are dimeric or tetrameric enzymes that bind two atoms of zinc per subunit. One of the zinc atom is essential for catalytic activity while the other is not. Both zinc atoms are coordinated by either cysteine or histidine residues; the catalytic zinc is coordinated by two cysteines and one histidine. Zinc-containing ADH's are found in bacteria, mammals, plants, and in fungi. In many species there is more than one isozyme (for example, humans have at least six isozymes, yeast have three, etc.). A number of other zinc-dependent dehydrogenases are closely related to zinc ADH [] and are included in this family. Sorbitol dehydrogenase (1.1.1.14 from EC) L-threonine 3-dehydrogenase (1.1.1.103 from EC) Glutathione-dependent formaldehyde dehydrogenase (1.1.1.284 from EC) Mannitol dehydrogenase (1.1.1.255 from EC) In addition, this family includes NADP-dependent quinone oxidoreductase (1.6.5.5 from EC), an enzyme found in bacteria (gene qor), in yeast and in mammals where, in some species such as rodents, it has been recruited as an eye lens protein and is known as zeta-crystallin []. The sequence of quinone oxidoreductase is distantly related to that other zinc-containing alcohol dehydrogenases and it lacks the zinc-ligand residues. The torpedo fish and mammalian synaptic vesicle membrane protein vat-1 is related to qor. This entry represents the cofactor-binding domain of these enzymes, which is normally found towards the C terminus. Structural studies indicate that it forms a classical Rossman fold that reversibly binds NAD(H) [, , ].; GO: 0008270 zinc ion binding, 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 3PI7_A 3COS_D 1VJ1_A 2ZB3_A 1PIW_B 1Q1N_A 1PS0_A 2EER_B 3KRT_A 1ZSY_A ....

>cd05286 QOR2 Quinone oxidoreductase (QOR)

Probab=95.16  E-value=0.09  Score=44.38  Aligned_cols=76  Identities=12%  Similarity=0.196  Sum_probs=48.2

Q ss_pred             EEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCee
Q 025509            2 DIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQLN   81 (251)
Q Consensus         2 ~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~id   81 (251)
                      +++|.|+++++|.++++.+...|++|+.+.+++++.+.+ .++     +.. .++  +..+. +..+.+.+.. ...++|
T Consensus       139 ~vlI~g~~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~-----g~~-~~~--~~~~~-~~~~~~~~~~-~~~~~d  207 (320)
T cd05286         139 TVLVHAAAGGVGLLLTQWAKALGATVIGTVSSEEKAELA-RAA-----GAD-HVI--NYRDE-DFVERVREIT-GGRGVD  207 (320)
T ss_pred             EEEEEcCCchHHHHHHHHHHHcCCEEEEEcCCHHHHHHH-HHC-----CCC-EEE--eCCch-hHHHHHHHHc-CCCCee
Confidence            689999999999999998888999999988877665443 211     221 112  22222 2222222221 123699


Q ss_pred             EEEEcCC
Q 025509           82 ILINNAG   88 (251)
Q Consensus        82 ~lv~~ag   88 (251)
                      .++++.+
T Consensus       208 ~vl~~~~  214 (320)
T cd05286         208 VVYDGVG  214 (320)
T ss_pred             EEEECCC
Confidence            9999876

Quinone oxidoreductase (QOR) and 2-haloacrylate reductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. 2-haloacrylate reductase, a member of this subgroup, catalyzes the NADPH-dependent reduction of a carbon-carbon double bond in organohalogen compounds. Although similar to QOR, Burkholderia 2-haloacrylate reductase does not act on the quinones 1,4-benzoquinone

>COG3007 Uncharacterized paraquat-inducible protein B [Function unknown]

Probab=95.12  E-value=0.29  Score=41.33  Aligned_cols=87  Identities=11%  Similarity=0.150  Sum_probs=56.2

Q ss_pred             CEEEEECCCChhHHHHHHHHHH-cCCEEEEEecCch-------h----HHHHHHHHHhhCCCCceEEEEecCCCHHHHHH
Q 025509            1 MDIVITGATSGIGTETARVLAL-RGVHVVMGVRDIA-------A----GKDVKETIVKEIPSAKVDAMELDLSSLASVRN   68 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~-~G~~Vi~~~r~~~-------~----~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~   68 (251)
                      |+|||.|+|+|-|.|.-...+= .|+.-+.+.....       .    ....-++..+.. +-...-+..|.-+.+--+.
T Consensus        42 KkVLviGaSsGyGLa~RIsaaFG~gAdTiGVffE~pgte~~~gtagwyn~~~f~~~A~~k-GlyAksingDaFS~e~k~k  120 (398)
T COG3007          42 KKVLVIGASSGYGLAARISAAFGPGADTIGVFFERPGTERKPGTAGWYNNAAFKKFAKQK-GLYAKSINGDAFSDEMKQK  120 (398)
T ss_pred             ceEEEEecCCcccHHHHHHHHhCCCCceeeEEeecCCccCCCcchhhhHHHHHHHHHHhc-CceeeecccchhhHHHHHH
Confidence            6899999999999886554442 3565554432111       0    111122222211 3345556778888888888


Q ss_pred             HHHHHHhcCCCeeEEEEcCC
Q 025509           69 FASEYNIQHHQLNILINNAG   88 (251)
Q Consensus        69 ~~~~~~~~~g~id~lv~~ag   88 (251)
                      .++.|+..+|.+|.+|..-+
T Consensus       121 vIe~Ik~~~g~vDlvvYSlA  140 (398)
T COG3007         121 VIEAIKQDFGKVDLVVYSLA  140 (398)
T ss_pred             HHHHHHHhhccccEEEEecc
Confidence            99999999999999999855

>PRK00094 gpsA NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Validated

Probab=95.11  E-value=0.37  Score=41.46  Aligned_cols=41  Identities=34%  Similarity=0.448  Sum_probs=34.5

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHH
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKE   42 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~   42 (251)
                      ++|.|.|+ |.+|.+++..|++.|++|.+.+|+++..+...+
T Consensus         2 mkI~iiG~-G~mG~~~a~~L~~~g~~V~~~~r~~~~~~~~~~   42 (325)
T PRK00094          2 MKIAVLGA-GSWGTALAIVLARNGHDVTLWARDPEQAAEINA   42 (325)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHH
Confidence            46888875 889999999999999999999998777665544

>cd08291 ETR_like_1 2-enoyl thioester reductase (ETR) like proteins, child 1

Probab=95.10  E-value=0.11  Score=44.75  Aligned_cols=75  Identities=23%  Similarity=0.281  Sum_probs=46.4

Q ss_pred             EEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCeeE
Q 025509            3 IVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQLNI   82 (251)
Q Consensus         3 vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~id~   82 (251)
                      ++++||++++|.+++......|++|+.+.+++++.+.+.+ +     +... ++  |..+.+..+. +.++... .++|+
T Consensus       147 lv~~~g~g~vG~~a~q~a~~~G~~vi~~~~~~~~~~~~~~-~-----g~~~-~i--~~~~~~~~~~-v~~~~~~-~~~d~  215 (324)
T cd08291         147 VVHTAAASALGRMLVRLCKADGIKVINIVRRKEQVDLLKK-I-----GAEY-VL--NSSDPDFLED-LKELIAK-LNATI  215 (324)
T ss_pred             EEEccCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH-c-----CCcE-EE--ECCCccHHHH-HHHHhCC-CCCcE
Confidence            4445999999999988777789999999888766554432 2     3322 22  2222222222 2222221 26999


Q ss_pred             EEEcCC
Q 025509           83 LINNAG   88 (251)
Q Consensus        83 lv~~ag   88 (251)
                      ++.+.|
T Consensus       216 vid~~g  221 (324)
T cd08291         216 FFDAVG  221 (324)
T ss_pred             EEECCC
Confidence            999887

2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordin

>PRK11199 tyrA bifunctional chorismate mutase/prephenate dehydrogenase; Provisional

Probab=95.05  E-value=0.13  Score=45.58  Aligned_cols=34  Identities=29%  Similarity=0.400  Sum_probs=31.3

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCc
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDI   34 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~   34 (251)
                      ++|.|.||.|.+|..+|+.|.+.|+.|.+.+|+.
T Consensus        99 ~~I~IiGG~GlmG~slA~~l~~~G~~V~~~d~~~  132 (374)
T PRK11199         99 RPVVIVGGKGQLGRLFAKMLTLSGYQVRILEQDD  132 (374)
T ss_pred             ceEEEEcCCChhhHHHHHHHHHCCCeEEEeCCCc
Confidence            4689999999999999999999999999999864

>cd08281 liver_ADH_like1 Zinc-dependent alcohol dehydrogenases (ADH) and class III ADG (AKA formaldehyde dehydrogenase)

Probab=95.05  E-value=0.18  Score=44.43  Aligned_cols=76  Identities=14%  Similarity=0.154  Sum_probs=48.3

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCC-EEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCC
Q 025509            1 MDIVITGATSGIGTETARVLALRGV-HVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQ   79 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~   79 (251)
                      ++|||+|+ +++|..++..+...|+ +|+.+++++++.+-+ +++     +..   ...|..+.+..+. +.++.  .++
T Consensus       193 ~~VlV~G~-G~vG~~a~~lak~~G~~~Vi~~~~~~~r~~~a-~~~-----Ga~---~~i~~~~~~~~~~-i~~~~--~~g  259 (371)
T cd08281         193 QSVAVVGL-GGVGLSALLGAVAAGASQVVAVDLNEDKLALA-REL-----GAT---ATVNAGDPNAVEQ-VRELT--GGG  259 (371)
T ss_pred             CEEEEECC-CHHHHHHHHHHHHcCCCcEEEEcCCHHHHHHH-HHc-----CCc---eEeCCCchhHHHH-HHHHh--CCC
Confidence            36899985 8999999888888899 698888887765543 222     332   1133333322222 23222  136


Q ss_pred             eeEEEEcCCC
Q 025509           80 LNILINNAGI   89 (251)
Q Consensus        80 id~lv~~ag~   89 (251)
                      +|++|.++|.
T Consensus       260 ~d~vid~~G~  269 (371)
T cd08281         260 VDYAFEMAGS  269 (371)
T ss_pred             CCEEEECCCC
Confidence            9999999873

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group contains members identified as zinc dependent alcohol dehydrogenases (ADH), and class III ADG (aka formaldehyde dehydrogenase, FDH). Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also know as glutathione-dependent formaldehyde dehyd

>PF01118 Semialdhyde_dh: Semialdehyde dehydrogenase, NAD binding domain; InterPro: IPR000534 The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase [], an enzyme involved in the biosynthesis of various amino acids from aspartate

Probab=95.05  E-value=0.096  Score=38.43  Aligned_cols=33  Identities=30%  Similarity=0.371  Sum_probs=26.2

Q ss_pred             EEEEECCCChhHHHHHHHHHHcC-CEEE-EEecCc
Q 025509            2 DIVITGATSGIGTETARVLALRG-VHVV-MGVRDI   34 (251)
Q Consensus         2 ~vlItG~s~gIG~a~a~~l~~~G-~~Vi-~~~r~~   34 (251)
                      +|.|+|++|.+|..+++.|+++- ++++ +++++.
T Consensus         1 rV~IvGAtG~vG~~l~~lL~~hp~~e~~~~~~~~~   35 (121)
T PF01118_consen    1 RVAIVGATGYVGRELLRLLAEHPDFELVALVSSSR   35 (121)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHTSTEEEEEEEESTT
T ss_pred             CEEEECCCCHHHHHHHHHHhcCCCccEEEeeeecc
Confidence            58999999999999999999864 4654 455554

This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase.; GO: 0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0006520 cellular amino acid metabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 3Q0E_B 1MB4_A 3PZR_A 1MC4_A 3TZ6_A 3VOS_A 2CVO_B 2R00_C 2QZ9_A 2EP5_C ....

>cd08270 MDR4 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=95.02  E-value=0.16  Score=42.90  Aligned_cols=40  Identities=33%  Similarity=0.513  Sum_probs=34.2

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHH
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDV   40 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~   40 (251)
                      .+++|.|+++++|.+++..+...|++|+.+++++++.+.+
T Consensus       134 ~~vli~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~  173 (305)
T cd08270         134 RRVLVTGASGGVGRFAVQLAALAGAHVVAVVGSPARAEGL  173 (305)
T ss_pred             CEEEEECCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH
Confidence            3689999999999999999999999999998877655444

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>TIGR00537 hemK_rel_arch HemK-related putative methylase

Probab=95.02  E-value=0.93  Score=35.47  Aligned_cols=71  Identities=20%  Similarity=0.248  Sum_probs=49.2

Q ss_pred             EEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCee
Q 025509            2 DIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQLN   81 (251)
Q Consensus         2 ~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~id   81 (251)
                      ++|=.|++.|.   ++..+++.|.+|+.++.++...+.+.+.+...  +..+.++..|+.+..            .+.+|
T Consensus        22 ~vLdlG~G~G~---~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~~--~~~~~~~~~d~~~~~------------~~~fD   84 (179)
T TIGR00537        22 DVLEIGAGTGL---VAIRLKGKGKCILTTDINPFAVKELRENAKLN--NVGLDVVMTDLFKGV------------RGKFD   84 (179)
T ss_pred             eEEEeCCChhH---HHHHHHhcCCEEEEEECCHHHHHHHHHHHHHc--CCceEEEEccccccc------------CCccc
Confidence            46677777664   44556666668999999988877777766543  345778888875421            13789


Q ss_pred             EEEEcCCC
Q 025509           82 ILINNAGI   89 (251)
Q Consensus        82 ~lv~~ag~   89 (251)
                      .++.|...
T Consensus        85 ~Vi~n~p~   92 (179)
T TIGR00537        85 VILFNPPY   92 (179)
T ss_pred             EEEECCCC
Confidence            99999764

The gene hemK from E. coli was found to contribute to heme biosynthesis and originally suggested to be protoporphyrinogen oxidase (Medline 95189105). Functional analysis of the nearest homolog in Saccharomyces cerevisiae, YNL063w, finds it is not protoporphyrinogen oxidase and sequence analysis suggests that HemK homologs have S-adenosyl-methionine-dependent methyltransferase activity (Medline 99237242). Homologs are found, usually in a single copy, in nearly all completed genomes, but varying somewhat in apparent domain architecture. This model represents an archaeal and eukaryotic protein family that lacks an N-terminal domain found in HemK and its eubacterial homologs. It is found in a single copy in the first six completed archaeal and eukaryotic genomes.

>PRK06129 3-hydroxyacyl-CoA dehydrogenase; Validated

Probab=94.99  E-value=0.074  Score=45.75  Aligned_cols=41  Identities=29%  Similarity=0.218  Sum_probs=35.3

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHH
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKE   42 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~   42 (251)
                      ++|.|+| +|-+|.++|..|++.|++|++.+|+++..+...+
T Consensus         3 ~~V~VIG-~G~mG~~iA~~la~~G~~V~v~d~~~~~~~~~~~   43 (308)
T PRK06129          3 GSVAIIG-AGLIGRAWAIVFARAGHEVRLWDADPAAAAAAPA   43 (308)
T ss_pred             cEEEEEC-ccHHHHHHHHHHHHCCCeeEEEeCCHHHHHHHHH
Confidence            4688998 7789999999999999999999999877666544

>PRK15128 23S rRNA m(5)C1962 methyltransferase; Provisional

Probab=94.98  E-value=2.5  Score=37.76  Aligned_cols=162  Identities=12%  Similarity=0.105  Sum_probs=87.7

Q ss_pred             EEEEECCC-ChhHHHHHHHHHHcCC-EEEEEecCchhHHHHHHHHHhhCCC-CceEEEEecCCCHHHHHHHHHHHHhcCC
Q 025509            2 DIVITGAT-SGIGTETARVLALRGV-HVVMGVRDIAAGKDVKETIVKEIPS-AKVDAMELDLSSLASVRNFASEYNIQHH   78 (251)
Q Consensus         2 ~vlItG~s-~gIG~a~a~~l~~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~-~~v~~~~~D~~~~~~i~~~~~~~~~~~g   78 (251)
                      +||=.|+. |+++.+.    +..|+ +|+.++.++..++.+.+.+....-+ .++.++..|+.+      .+++.....+
T Consensus       223 rVLDlfsgtG~~~l~a----a~~ga~~V~~VD~s~~al~~a~~N~~~Ngl~~~~v~~i~~D~~~------~l~~~~~~~~  292 (396)
T PRK15128        223 RVLNCFSYTGGFAVSA----LMGGCSQVVSVDTSQEALDIARQNVELNKLDLSKAEFVRDDVFK------LLRTYRDRGE  292 (396)
T ss_pred             eEEEeccCCCHHHHHH----HhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCcEEEEEccHHH------HHHHHHhcCC
Confidence            34444444 4444332    23455 8999999998888777776654222 367888888742      2233322334


Q ss_pred             CeeEEEEcCCCCCCCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccccCC
Q 025509           79 QLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKIN  158 (251)
Q Consensus        79 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~  158 (251)
                      ++|+||.+...+..    +.+.+.    .-..+...+.+.+++.++       ++|.++..|...               
T Consensus       293 ~fDlVilDPP~f~~----~k~~l~----~~~~~y~~l~~~a~~lLk-------~gG~lv~~scs~---------------  342 (396)
T PRK15128        293 KFDVIVMDPPKFVE----NKSQLM----GACRGYKDINMLAIQLLN-------PGGILLTFSCSG---------------  342 (396)
T ss_pred             CCCEEEECCCCCCC----ChHHHH----HHHHHHHHHHHHHHHHcC-------CCeEEEEEeCCC---------------
Confidence            79999988764322    111111    112233344455555554       367777666421               


Q ss_pred             CCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCCcchhh
Q 025509          159 DPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRHNSLFRS  217 (251)
Q Consensus       159 ~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~~~~~~~  217 (251)
                                 ..+.   +.|.+.+.......|+.+++.....-..+-|..-..++..+
T Consensus       343 -----------~~~~---~~f~~~v~~aa~~~~~~~~~l~~~~~~~DhP~~~~~pe~~Y  387 (396)
T PRK15128        343 -----------LMTS---DLFQKIIADAAIDAGRDVQFIEQFRQAADHPVIATYPEGLY  387 (396)
T ss_pred             -----------cCCH---HHHHHHHHHHHHHcCCeEEEEEEcCCCCCCCCCCCCCCcCC
Confidence                       1122   44455555545455555777666655556665554444444

>TIGR00872 gnd_rel 6-phosphogluconate dehydrogenase (decarboxylating)

Probab=94.98  E-value=0.51  Score=40.37  Aligned_cols=85  Identities=22%  Similarity=0.238  Sum_probs=53.6

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHH----------HHhhCCCCceEEEEecCCCHHHHHHHH
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKET----------IVKEIPSAKVDAMELDLSSLASVRNFA   70 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~----------~~~~~~~~~v~~~~~D~~~~~~i~~~~   70 (251)
                      |+|.|.|. |-+|.++++.|++.|++|.+.+|++++.+.+.+.          +.+.....++.++-  +.+. .++.++
T Consensus         1 M~Ig~IGl-G~mG~~la~~L~~~g~~V~~~dr~~~~~~~l~~~g~~~~~s~~~~~~~~~~~dvIi~~--vp~~-~~~~v~   76 (298)
T TIGR00872         1 MQLGLIGL-GRMGANIVRRLAKRGHDCVGYDHDQDAVKAMKEDRTTGVANLRELSQRLSAPRVVWVM--VPHG-IVDAVL   76 (298)
T ss_pred             CEEEEEcc-hHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHcCCcccCCHHHHHhhcCCCCEEEEE--cCch-HHHHHH
Confidence            46778874 7899999999999999999999998877665432          11111122333332  3333 666666


Q ss_pred             HHHHhcCCCeeEEEEcCCC
Q 025509           71 SEYNIQHHQLNILINNAGI   89 (251)
Q Consensus        71 ~~~~~~~g~id~lv~~ag~   89 (251)
                      +++.....+=+++|++...
T Consensus        77 ~~l~~~l~~g~ivid~st~   95 (298)
T TIGR00872        77 EELAPTLEKGDIVIDGGNS   95 (298)
T ss_pred             HHHHhhCCCCCEEEECCCC
Confidence            6665443233567766543

This family resembles a larger family (gnd) of bacterial and eukaryotic 6-phosphogluconate dehydrogenases but differs from it by a deep split in a UPGMA similarity clustering tree and the lack of a central region of about 140 residues. Among complete genomes, it is found is found in Bacillus subtilis and Mycobacterium tuberculosis, both of which also contain gnd, and in Aquifex aeolicus. The protein from Methylobacillus flagellatus KT has been characterized as a decarboxylating 6-phosphogluconate dehydrogenase as part of an unusual formaldehyde oxidation cycle. In some sequenced organisms members of this family are the sole 6-phosphogluconate dehydrogenase present and are probably active in the pentose phosphate cycle.

>PRK14967 putative methyltransferase; Provisional

Probab=94.93  E-value=1  Score=36.64  Aligned_cols=73  Identities=15%  Similarity=0.135  Sum_probs=47.3

Q ss_pred             EEEEECCCChhHHHHHHHHHHcCC-EEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            2 DIVITGATSGIGTETARVLALRGV-HVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         2 ~vlItG~s~gIG~a~a~~l~~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      ++|-.|+++|.   ++..+++.|+ +|+.++.++..+....+.+...  +.++.++..|+.+.      +     ..+.+
T Consensus        39 ~vLDlGcG~G~---~~~~la~~~~~~v~~vD~s~~~l~~a~~n~~~~--~~~~~~~~~d~~~~------~-----~~~~f  102 (223)
T PRK14967         39 RVLDLCTGSGA---LAVAAAAAGAGSVTAVDISRRAVRSARLNALLA--GVDVDVRRGDWARA------V-----EFRPF  102 (223)
T ss_pred             eEEEecCCHHH---HHHHHHHcCCCeEEEEECCHHHHHHHHHHHHHh--CCeeEEEECchhhh------c-----cCCCe
Confidence            57778887654   3444555566 8999999987776665555433  33566777676431      1     12479


Q ss_pred             eEEEEcCCCC
Q 025509           81 NILINNAGIM   90 (251)
Q Consensus        81 d~lv~~ag~~   90 (251)
                      |.++.|....
T Consensus       103 D~Vi~npPy~  112 (223)
T PRK14967        103 DVVVSNPPYV  112 (223)
T ss_pred             eEEEECCCCC
Confidence            9999998754

>PLN02827 Alcohol dehydrogenase-like

Probab=94.90  E-value=0.23  Score=43.90  Aligned_cols=77  Identities=14%  Similarity=0.170  Sum_probs=48.8

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCE-EEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCH-HHHHHHHHHHHhcCC
Q 025509            1 MDIVITGATSGIGTETARVLALRGVH-VVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSL-ASVRNFASEYNIQHH   78 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~-Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~-~~i~~~~~~~~~~~g   78 (251)
                      ++|||.|+ |++|..+++.+...|++ |+.+++++++.+.+ .++     +... +  .|..+. ++..+.+.++..  +
T Consensus       195 ~~VlV~G~-G~vG~~~iqlak~~G~~~vi~~~~~~~~~~~a-~~l-----Ga~~-~--i~~~~~~~~~~~~v~~~~~--~  262 (378)
T PLN02827        195 SSVVIFGL-GTVGLSVAQGAKLRGASQIIGVDINPEKAEKA-KTF-----GVTD-F--INPNDLSEPIQQVIKRMTG--G  262 (378)
T ss_pred             CEEEEECC-CHHHHHHHHHHHHcCCCeEEEECCCHHHHHHH-HHc-----CCcE-E--EcccccchHHHHHHHHHhC--C
Confidence            36899985 89999999988888984 77777776654433 222     3321 1  233332 344444444432  3


Q ss_pred             CeeEEEEcCCC
Q 025509           79 QLNILINNAGI   89 (251)
Q Consensus        79 ~id~lv~~ag~   89 (251)
                      ++|+++.++|.
T Consensus       263 g~d~vid~~G~  273 (378)
T PLN02827        263 GADYSFECVGD  273 (378)
T ss_pred             CCCEEEECCCC
Confidence            69999999983

>PF03807 F420_oxidored: NADP oxidoreductase coenzyme F420-dependent; InterPro: IPR004455 The function of F420-dependent NADP reductase is the transfer of electrons from reduced coenzyme F420 into an electron transport chain

Probab=94.90  E-value=0.11  Score=36.10  Aligned_cols=41  Identities=22%  Similarity=0.302  Sum_probs=33.6

Q ss_pred             EEEECCCChhHHHHHHHHHHcC---CEEEEE-ecCchhHHHHHHHH
Q 025509            3 IVITGATSGIGTETARVLALRG---VHVVMG-VRDIAAGKDVKETI   44 (251)
Q Consensus         3 vlItG~s~gIG~a~a~~l~~~G---~~Vi~~-~r~~~~~~~~~~~~   44 (251)
                      +.|. |+|.+|.++++.|.+.|   .+|.++ .|++++.++..++.
T Consensus         2 I~iI-G~G~mg~al~~~l~~~g~~~~~v~~~~~r~~~~~~~~~~~~   46 (96)
T PF03807_consen    2 IGII-GAGNMGSALARGLLASGIKPHEVIIVSSRSPEKAAELAKEY   46 (96)
T ss_dssp             EEEE-STSHHHHHHHHHHHHTTS-GGEEEEEEESSHHHHHHHHHHC
T ss_pred             EEEE-CCCHHHHHHHHHHHHCCCCceeEEeeccCcHHHHHHHHHhh
Confidence            4445 78999999999999999   899866 89998887776543

It catalyses the reduction of F420 with NADP(+) and the reduction of NADP(+) with F420H(2).; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2IZZ_B 2GR9_B 2GRA_B 2GER_C 2AMF_E 2AHR_C 2VQ3_B 2VNS_B 2RCY_D 2YJZ_D ....

>PRK01438 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=94.90  E-value=0.23  Score=45.37  Aligned_cols=73  Identities=11%  Similarity=0.078  Sum_probs=47.9

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCch-hHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCC
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIA-AGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQ   79 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~-~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~   79 (251)
                      |+|+|.|+ |++|.++|+.|.++|++|.+++++.. ......+.+++.    .+.++..+-..             ....
T Consensus        17 ~~v~viG~-G~~G~~~A~~L~~~G~~V~~~d~~~~~~~~~~~~~l~~~----gv~~~~~~~~~-------------~~~~   78 (480)
T PRK01438         17 LRVVVAGL-GVSGFAAADALLELGARVTVVDDGDDERHRALAAILEAL----GATVRLGPGPT-------------LPED   78 (480)
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCchhhhHHHHHHHHHc----CCEEEECCCcc-------------ccCC
Confidence            46889986 77999999999999999999986543 223333444332    34444332211             0125


Q ss_pred             eeEEEEcCCCCC
Q 025509           80 LNILINNAGIMG   91 (251)
Q Consensus        80 id~lv~~ag~~~   91 (251)
                      .|.||.+.|+.+
T Consensus        79 ~D~Vv~s~Gi~~   90 (480)
T PRK01438         79 TDLVVTSPGWRP   90 (480)
T ss_pred             CCEEEECCCcCC
Confidence            899999999753

>PRK12480 D-lactate dehydrogenase; Provisional

Probab=94.87  E-value=0.35  Score=42.12  Aligned_cols=86  Identities=19%  Similarity=0.195  Sum_probs=53.8

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHH---HHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcC
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVK---ETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQH   77 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~---~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~   77 (251)
                      |++.|.|. |.||+++|+.|...|++|+..+|++.......   ..+.+.....++.++.+..+.. ...-+-++.....
T Consensus       147 ~~VgIIG~-G~IG~~vA~~L~~~G~~V~~~d~~~~~~~~~~~~~~~l~ell~~aDiVil~lP~t~~-t~~li~~~~l~~m  224 (330)
T PRK12480        147 MTVAIIGT-GRIGAATAKIYAGFGATITAYDAYPNKDLDFLTYKDSVKEAIKDADIISLHVPANKE-SYHLFDKAMFDHV  224 (330)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCChhHhhhhhhccCCHHHHHhcCCEEEEeCCCcHH-HHHHHhHHHHhcC
Confidence            46788865 67999999999999999999999865432211   1233333456677777766532 2222223333333


Q ss_pred             CCeeEEEEcCCC
Q 025509           78 HQLNILINNAGI   89 (251)
Q Consensus        78 g~id~lv~~ag~   89 (251)
                       +-+.++.|++-
T Consensus       225 -k~gavlIN~aR  235 (330)
T PRK12480        225 -KKGAILVNAAR  235 (330)
T ss_pred             -CCCcEEEEcCC
Confidence             44667777764

>COG0476 ThiF Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2 [Coenzyme metabolism]

Probab=94.86  E-value=0.27  Score=41.02  Aligned_cols=34  Identities=29%  Similarity=0.554  Sum_probs=29.4

Q ss_pred             EEEEECCCChhHHHHHHHHHHcCC-EEEEEecCchh
Q 025509            2 DIVITGATSGIGTETARVLALRGV-HVVMGVRDIAA   36 (251)
Q Consensus         2 ~vlItG~s~gIG~a~a~~l~~~G~-~Vi~~~r~~~~   36 (251)
                      +|+|.| .||+|.++++.|+..|. ++.+++.+.-.
T Consensus        32 ~vlvvG-~GglG~~~~~~la~aGvg~l~i~D~d~v~   66 (254)
T COG0476          32 RVLVVG-AGGLGSPAAKYLALAGVGKLTIVDFDTVE   66 (254)
T ss_pred             CEEEEe-cChhHHHHHHHHHHcCCCeEEEEcCCccc
Confidence            589999 89999999999999997 78888876544

>TIGR03451 mycoS_dep_FDH mycothiol-dependent formaldehyde dehydrogenase

Probab=94.85  E-value=0.18  Score=44.18  Aligned_cols=76  Identities=16%  Similarity=0.215  Sum_probs=47.5

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCC-EEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCC
Q 025509            1 MDIVITGATSGIGTETARVLALRGV-HVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQ   79 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~   79 (251)
                      ++|||.|+ +++|.+++..+...|+ +|+.+++++++.+.+. ++     +.. .+  .|..+.+..+. +.++.. ..+
T Consensus       178 ~~VlV~G~-g~vG~~a~~~ak~~G~~~Vi~~~~~~~~~~~~~-~~-----Ga~-~~--i~~~~~~~~~~-i~~~~~-~~g  245 (358)
T TIGR03451       178 DSVAVIGC-GGVGDAAIAGAALAGASKIIAVDIDDRKLEWAR-EF-----GAT-HT--VNSSGTDPVEA-IRALTG-GFG  245 (358)
T ss_pred             CEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHH-Hc-----CCc-eE--EcCCCcCHHHH-HHHHhC-CCC
Confidence            36899975 9999999988888898 4888888876655442 22     332 11  23333222222 222211 125


Q ss_pred             eeEEEEcCC
Q 025509           80 LNILINNAG   88 (251)
Q Consensus        80 id~lv~~ag   88 (251)
                      +|+++.++|
T Consensus       246 ~d~vid~~g  254 (358)
T TIGR03451       246 ADVVIDAVG  254 (358)
T ss_pred             CCEEEECCC
Confidence            899999988

Members of this protein family are mycothiol-dependent formaldehyde dehydrogenase (EC 1.2.1.66). This protein is found, so far, only in the Actinobacteria (Mycobacterium sp., Streptomyces sp., Corynebacterium sp., and related species), where mycothione replaces glutathione.

>PRK12767 carbamoyl phosphate synthase-like protein; Provisional

Probab=94.84  E-value=0.16  Score=43.79  Aligned_cols=74  Identities=14%  Similarity=0.085  Sum_probs=44.9

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcC--CEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCC
Q 025509            1 MDIVITGATSGIGTETARVLALRG--VHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHH   78 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G--~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g   78 (251)
                      ++|||||+++++  ++++.|.+.|  ++|++++.++......   .      ....+..-+..+.+.++.+.+.+. ++ 
T Consensus         2 ~~vLv~g~~~~~--~~~~~l~~~~~g~~vi~~d~~~~~~~~~---~------~d~~~~~p~~~~~~~~~~l~~~~~-~~-   68 (326)
T PRK12767          2 MNILVTSAGRRV--QLVKALKKSLLKGRVIGADISELAPALY---F------ADKFYVVPKVTDPNYIDRLLDICK-KE-   68 (326)
T ss_pred             ceEEEecCCccH--HHHHHHHHhccCCEEEEECCCCcchhhH---h------ccCcEecCCCCChhHHHHHHHHHH-Hh-
Confidence            579999999887  8899999884  8999998774332111   1      111112123344444444444433 22 


Q ss_pred             CeeEEEEcC
Q 025509           79 QLNILINNA   87 (251)
Q Consensus        79 ~id~lv~~a   87 (251)
                      ++|+++-+.
T Consensus        69 ~id~ii~~~   77 (326)
T PRK12767         69 KIDLLIPLI   77 (326)
T ss_pred             CCCEEEECC
Confidence            689888764

>PRK05476 S-adenosyl-L-homocysteine hydrolase; Provisional

Probab=94.80  E-value=0.22  Score=44.79  Aligned_cols=38  Identities=21%  Similarity=0.260  Sum_probs=32.9

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHH
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKD   39 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~   39 (251)
                      ++++|.|. |.||+.+|+.|...|++|+++++++.+..+
T Consensus       213 k~VlViG~-G~IG~~vA~~lr~~Ga~ViV~d~dp~ra~~  250 (425)
T PRK05476        213 KVVVVAGY-GDVGKGCAQRLRGLGARVIVTEVDPICALQ  250 (425)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCEEEEEcCCchhhHH
Confidence            57899997 689999999999999999999998766543

>COG4123 Predicted O-methyltransferase [General function prediction only]

Probab=94.78  E-value=0.22  Score=41.35  Aligned_cols=120  Identities=14%  Similarity=0.164  Sum_probs=72.7

Q ss_pred             EEEEECCC-ChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            2 DIVITGAT-SGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         2 ~vlItG~s-~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      +||=.|++ |.+|..+|++...  +.|..+.+.+...+.+.+.+..+.-..++.++..|+.+..      +..  .+..+
T Consensus        47 ~IlDlGaG~G~l~L~la~r~~~--a~I~~VEiq~~~a~~A~~nv~ln~l~~ri~v~~~Di~~~~------~~~--~~~~f  116 (248)
T COG4123          47 RILDLGAGNGALGLLLAQRTEK--AKIVGVEIQEEAAEMAQRNVALNPLEERIQVIEADIKEFL------KAL--VFASF  116 (248)
T ss_pred             eEEEecCCcCHHHHHHhccCCC--CcEEEEEeCHHHHHHHHHHHHhCcchhceeEehhhHHHhh------hcc--ccccc
Confidence            34445555 6677777765544  7899999988777777777665444567888888875422      211  12369


Q ss_pred             eEEEEcCCCCCCCCcCCchhhHH----HHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcC
Q 025509           81 NILINNAGIMGTPFMLSKDNIEL----QFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSS  141 (251)
Q Consensus        81 d~lv~~ag~~~~~~~~~~~~~~~----~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS  141 (251)
                      |.||+|-..+.......++....    +...+...   +++.+...++       ++|++.+|..
T Consensus       117 D~Ii~NPPyf~~~~~~~~~~~~~~Ar~e~~~~le~---~i~~a~~~lk-------~~G~l~~V~r  171 (248)
T COG4123         117 DLIICNPPYFKQGSRLNENPLRAIARHEITLDLED---LIRAAAKLLK-------PGGRLAFVHR  171 (248)
T ss_pred             CEEEeCCCCCCCccccCcChhhhhhhhhhcCCHHH---HHHHHHHHcc-------CCCEEEEEec
Confidence            99999998775533323333222    22223222   3333333443       4789999886

>PLN02775 Probable dihydrodipicolinate reductase

Probab=94.75  E-value=1.3  Score=37.57  Aligned_cols=82  Identities=17%  Similarity=0.249  Sum_probs=57.3

Q ss_pred             EEEEECCCChhHHHHHHHHHHcCCEEEE-EecCc-------------------hhHHHHHHHHHhhCCCCceEEEEecCC
Q 025509            2 DIVITGATSGIGTETARVLALRGVHVVM-GVRDI-------------------AAGKDVKETIVKEIPSAKVDAMELDLS   61 (251)
Q Consensus         2 ~vlItG~s~gIG~a~a~~l~~~G~~Vi~-~~r~~-------------------~~~~~~~~~~~~~~~~~~v~~~~~D~~   61 (251)
                      .|+|.|+.|-+|+++++...+.++.++. +++.+                   ..+++....+..    .....+.+|+|
T Consensus        13 ~V~V~Ga~G~MG~~~~~av~~~~~~Lv~~~~~~~~~~~~~~~~~g~~v~~~~~~dl~~~l~~~~~----~~~~~VvIDFT   88 (286)
T PLN02775         13 PIMVNGCTGKMGHAVAEAAVSAGLQLVPVSFTGPAGVGVTVEVCGVEVRLVGPSEREAVLSSVKA----EYPNLIVVDYT   88 (286)
T ss_pred             eEEEECCCChHHHHHHHHHhcCCCEEEEEeccccccccccceeccceeeeecCccHHHHHHHhhc----cCCCEEEEECC
Confidence            5899999999999999999888887664 33221                   111222211111    13444678999


Q ss_pred             CHHHHHHHHHHHHhcCCCeeEEEEcCCC
Q 025509           62 SLASVRNFASEYNIQHHQLNILINNAGI   89 (251)
Q Consensus        62 ~~~~i~~~~~~~~~~~g~id~lv~~ag~   89 (251)
                      .++.+...++...+.  ++..||-..|+
T Consensus        89 ~P~a~~~~~~~~~~~--g~~~VvGTTG~  114 (286)
T PLN02775         89 LPDAVNDNAELYCKN--GLPFVMGTTGG  114 (286)
T ss_pred             ChHHHHHHHHHHHHC--CCCEEEECCCC
Confidence            999999988877654  57899999986

>cd08248 RTN4I1 Human Reticulon 4 Interacting Protein 1

Probab=94.71  E-value=0.29  Score=42.40  Aligned_cols=72  Identities=18%  Similarity=0.363  Sum_probs=45.6

Q ss_pred             EEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCee
Q 025509            2 DIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQLN   81 (251)
Q Consensus         2 ~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~id   81 (251)
                      +++|+|+++++|.++++.....|++|+.+.++ ++ .+..+++     +..   ...|..+.+....+    .. .+++|
T Consensus       165 ~vlI~g~~g~ig~~~~~~a~~~G~~v~~~~~~-~~-~~~~~~~-----g~~---~~~~~~~~~~~~~l----~~-~~~vd  229 (350)
T cd08248         165 RVLILGGSGGVGTFAIQLLKAWGAHVTTTCST-DA-IPLVKSL-----GAD---DVIDYNNEDFEEEL----TE-RGKFD  229 (350)
T ss_pred             EEEEECCCChHHHHHHHHHHHCCCeEEEEeCc-ch-HHHHHHh-----CCc---eEEECCChhHHHHH----Hh-cCCCC
Confidence            68999999999999999888899998887764 22 2222222     221   12233333333322    21 24699


Q ss_pred             EEEEcCC
Q 025509           82 ILINNAG   88 (251)
Q Consensus        82 ~lv~~ag   88 (251)
                      +++.+.|
T Consensus       230 ~vi~~~g  236 (350)
T cd08248         230 VILDTVG  236 (350)
T ss_pred             EEEECCC
Confidence            9999887

Human Reticulon 4 Interacting Protein 1 is a member of the medium chain dehydrogenase/ reductase (MDR) family. Riticulons are endoplasmic reticulum associated proteins involved in membrane trafficking and neuroendocrine secretion. The MDR/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.

>TIGR02817 adh_fam_1 zinc-binding alcohol dehydrogenase family protein

Probab=94.71  E-value=0.26  Score=42.41  Aligned_cols=39  Identities=18%  Similarity=0.308  Sum_probs=32.1

Q ss_pred             EEEEECCCChhHHHHHHHHHHc-CCEEEEEecCchhHHHH
Q 025509            2 DIVITGATSGIGTETARVLALR-GVHVVMGVRDIAAGKDV   40 (251)
Q Consensus         2 ~vlItG~s~gIG~a~a~~l~~~-G~~Vi~~~r~~~~~~~~   40 (251)
                      ++||+|+++++|.++++.+... |++|+.+.+++++.+.+
T Consensus       151 ~vlV~ga~g~vg~~~~~~ak~~~G~~vi~~~~~~~~~~~l  190 (336)
T TIGR02817       151 ALLIIGGAGGVGSILIQLARQLTGLTVIATASRPESQEWV  190 (336)
T ss_pred             EEEEEcCCcHHHHHHHHHHHHhCCCEEEEEcCcHHHHHHH
Confidence            7899999999999998777666 99999998876654443

Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). While some current members of this family carry designations as putative alginate lyase, it seems no sequence with a direct characterization as such is detected by this model.

>cd08299 alcohol_DH_class_I_II_IV class I, II, IV alcohol dehydrogenases

Probab=94.66  E-value=0.31  Score=43.00  Aligned_cols=75  Identities=9%  Similarity=0.160  Sum_probs=48.4

Q ss_pred             EEEEECCCChhHHHHHHHHHHcCC-EEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCH-HHHHHHHHHHHhcCCC
Q 025509            2 DIVITGATSGIGTETARVLALRGV-HVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSL-ASVRNFASEYNIQHHQ   79 (251)
Q Consensus         2 ~vlItG~s~gIG~a~a~~l~~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~-~~i~~~~~~~~~~~g~   79 (251)
                      +++|.| ++++|.+++..+...|. +|+.++++..+.+.+ .++     +.. .++  +..+. +...+.+.++..  ++
T Consensus       193 ~VlV~G-~g~vG~~~~~~a~~~G~~~Vi~~~~~~~~~~~a-~~l-----Ga~-~~i--~~~~~~~~~~~~v~~~~~--~~  260 (373)
T cd08299         193 TCAVFG-LGGVGLSAIMGCKAAGASRIIAVDINKDKFAKA-KEL-----GAT-ECI--NPQDYKKPIQEVLTEMTD--GG  260 (373)
T ss_pred             EEEEEC-CCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH-HHc-----CCc-eEe--cccccchhHHHHHHHHhC--CC
Confidence            689996 68999999999989998 799999887665554 222     321 112  22221 123333333322  36


Q ss_pred             eeEEEEcCC
Q 025509           80 LNILINNAG   88 (251)
Q Consensus        80 id~lv~~ag   88 (251)
                      +|+++.+.|
T Consensus       261 ~d~vld~~g  269 (373)
T cd08299         261 VDFSFEVIG  269 (373)
T ss_pred             CeEEEECCC
Confidence            999999987

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group includes alcohol dehydrogenases corresponding to mammalian classes I, II, IV. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically

>TIGR01751 crot-CoA-red crotonyl-CoA reductase

Probab=94.63  E-value=0.3  Score=43.49  Aligned_cols=37  Identities=22%  Similarity=0.338  Sum_probs=31.5

Q ss_pred             EEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHH
Q 025509            2 DIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGK   38 (251)
Q Consensus         2 ~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~   38 (251)
                      +++|+|+++++|.+++..+...|++++++.++.++.+
T Consensus       192 ~vlV~Ga~g~vG~~ai~~ak~~G~~vi~~~~~~~~~~  228 (398)
T TIGR01751       192 NVLIWGAAGGLGSYATQLARAGGGNPVAVVSSPEKAE  228 (398)
T ss_pred             EEEEEcCCcHHHHHHHHHHHHcCCeEEEEcCCHHHHH
Confidence            6899999999999999888889999888877765543

The enzyme modelled by this alignment is responsible for the conversion of crotonyl-CoA reductase to butyryl-CoA. In serine cycle methylotrophic bacteria this enzyme is involved in the process of acetyl-CoA to glyoxylate. In other bacteria the enzyme is used to produce butyrate for incorporation into polyketides such as tylosin from Streptomyces fradiae and coronatine from Pseudomonas syringae.

>cd08233 butanediol_DH_like (2R,3R)-2,3-butanediol dehydrogenase

Probab=94.60  E-value=0.18  Score=43.81  Aligned_cols=77  Identities=19%  Similarity=0.270  Sum_probs=48.5

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCC-EEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCC
Q 025509            1 MDIVITGATSGIGTETARVLALRGV-HVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQ   79 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~   79 (251)
                      ++++|+|+ +++|.++++.+...|+ +|+++++++++.+.+ .++     +...   ..|..+.+..+.+ .+.. ..++
T Consensus       174 ~~vlI~g~-g~vG~~a~q~a~~~G~~~v~~~~~~~~~~~~~-~~~-----ga~~---~i~~~~~~~~~~l-~~~~-~~~~  241 (351)
T cd08233         174 DTALVLGA-GPIGLLTILALKAAGASKIIVSEPSEARRELA-EEL-----GATI---VLDPTEVDVVAEV-RKLT-GGGG  241 (351)
T ss_pred             CEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHH-HHh-----CCCE---EECCCccCHHHHH-HHHh-CCCC
Confidence            36899985 8999999999999999 788888877665433 222     3221   1244433322222 2221 1235


Q ss_pred             eeEEEEcCCC
Q 025509           80 LNILINNAGI   89 (251)
Q Consensus        80 id~lv~~ag~   89 (251)
                      +|+++.+.|.
T Consensus       242 ~d~vid~~g~  251 (351)
T cd08233         242 VDVSFDCAGV  251 (351)
T ss_pred             CCEEEECCCC
Confidence            9999999873

(2R,3R)-2,3-butanediol dehydrogenase, a zinc-dependent medium chain alcohol dehydrogenase, catalyzes the NAD(+)-dependent oxidation of (2R,3R)-2,3-butanediol and meso-butanediol to acetoin. BDH functions as a homodimer. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit.

>PRK09288 purT phosphoribosylglycinamide formyltransferase 2; Validated

Probab=94.59  E-value=0.16  Score=45.18  Aligned_cols=72  Identities=15%  Similarity=0.183  Sum_probs=50.5

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      |+++|+|++ -.|..+++.+.+.|++|++++.++......   .     . + .++..|..|.+.+.+++++.     ++
T Consensus        13 ~~ilIiG~g-~~~~~~~~a~~~~G~~v~~~~~~~~~~~~~---~-----a-d-~~~~~~~~d~~~l~~~~~~~-----~i   76 (395)
T PRK09288         13 TRVMLLGSG-ELGKEVAIEAQRLGVEVIAVDRYANAPAMQ---V-----A-H-RSHVIDMLDGDALRAVIERE-----KP   76 (395)
T ss_pred             CEEEEECCC-HHHHHHHHHHHHCCCEEEEEeCCCCCchHH---h-----h-h-heEECCCCCHHHHHHHHHHh-----CC
Confidence            579999876 589999999999999999998876431111   1     0 1 13566788888777766542     68


Q ss_pred             eEEEEcCC
Q 025509           81 NILINNAG   88 (251)
Q Consensus        81 d~lv~~ag   88 (251)
                      |.++....
T Consensus        77 d~vi~~~e   84 (395)
T PRK09288         77 DYIVPEIE   84 (395)
T ss_pred             CEEEEeeC
Confidence            88876543

>cd08277 liver_alcohol_DH_like Liver alcohol dehydrogenase

Probab=94.57  E-value=0.28  Score=43.10  Aligned_cols=76  Identities=11%  Similarity=0.121  Sum_probs=47.8

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCC-EEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCH-HHHHHHHHHHHhcCC
Q 025509            1 MDIVITGATSGIGTETARVLALRGV-HVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSL-ASVRNFASEYNIQHH   78 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~-~~i~~~~~~~~~~~g   78 (251)
                      .++||.| ++++|..++..+...|+ +|+.+++++.+.+.+ +++     +.. .+  .|..+. ..+.+.+.++..  +
T Consensus       186 ~~vlV~G-~g~vG~~~~~~a~~~G~~~Vi~~~~~~~~~~~~-~~~-----ga~-~~--i~~~~~~~~~~~~~~~~~~--~  253 (365)
T cd08277         186 STVAVFG-LGAVGLSAIMGAKIAGASRIIGVDINEDKFEKA-KEF-----GAT-DF--INPKDSDKPVSEVIREMTG--G  253 (365)
T ss_pred             CEEEEEC-CCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHH-HHc-----CCC-cE--eccccccchHHHHHHHHhC--C
Confidence            3689997 59999999998888898 799999887665444 222     322 11  122221 123333333332  3


Q ss_pred             CeeEEEEcCC
Q 025509           79 QLNILINNAG   88 (251)
Q Consensus        79 ~id~lv~~ag   88 (251)
                      ++|++|.+.|
T Consensus       254 g~d~vid~~g  263 (365)
T cd08277         254 GVDYSFECTG  263 (365)
T ss_pred             CCCEEEECCC
Confidence            6999999987

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ i

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	251
3rd5_A	291	Crystal Structure Of A Putative Uncharacterized Pro		7e-25
1xhl_A	297	Crystal Structure Of Putative Tropinone Reductase-I		8e-09
3csd_B	281	Actinorhodin Polyketide Ketoreductase Mutant P94l B		2e-07
2rhr_B	277	P94l Actinorhodin Ketordeuctase Mutant, With Nadph		2e-07
2ew8_A	249	Crystal Structure Of The (s)-specific 1-phenylethan		3e-07
4dc0_A	281	Crystal Structure Of F189w Actinorhodin Polyketide		4e-07
4dc1_A	281	Crystal Structure Of Y202f Actinorhodin Polyketide		5e-07
1w4z_A	281	Structure Of Actinorhodin Polyketide (Actiii) Reduc		5e-07
4dbz_A	281	Crystal Structure Of V151l Actinorhodin Polyketide		5e-07
1x7g_A	261	Actinorhodin Polyketide Ketoreductase, Act Kr, With		6e-07
3rku_A	287	Substrate Fingerprint And The Structure Of Nadp+ De		6e-07
2rh4_A	277	Actinorhodin Ketoreductase, Actkr, With Nadph And I		6e-07
3lyl_A	247	Structure Of 3-Oxoacyl-Acylcarrier Protein Reductas		1e-06
1xg5_A	279	Structure Of Human Putative Dehydrogenase Mgc4172 I		2e-06
4e3z_A	272	Crystal Structure Of A Oxidoreductase From Rhizobiu		3e-06
3rkr_A	262	Crystal Structure Of A Metagenomic Short-Chain Oxid		4e-06
2c07_A	285	Oxoacyl-Acp Reductase Of Plasmodium Falciparum Leng		1e-05
3sj7_A	252	Structure Of Beta-Ketoacetyl-Coa Reductase (Fabg) F		2e-05
3u5t_A	267	The Crystal Structure Of 3-Oxoacyl-[acyl-Carrier-Pr		2e-05
3o26_A	311	The Structure Of Salutaridine Reductase From Papave		2e-05
1wmb_A	260	Crystal Structure Of Nad Dependent D-3-Hydroxybutyl		2e-05
3tfo_A	264	Crystal Structure Of A Putative 3-Oxoacyl-(Acyl-Car		3e-05
2gdz_A	267	Crystal Structure Of 15-Hydroxyprostaglandin Dehydr		3e-05
2ztm_A	260	T190s Mutant Of D-3-Hydroxybutyrate Dehydrogenase L		5e-05
3sju_A	279	Hedamycin Polyketide Ketoreductase Bound To Nadph L		6e-05
3osu_A	246	Crystal Structure Of The 3-Oxoacyl-Acyl Carrier Pro		6e-05
2ztu_A	260	T190a Mutant Of D-3-Hydroxybutyrate Dehydrogenase C		8e-05
3pk0_A	262	Crystal Structure Of Short-Chain DehydrogenaseREDUC		8e-05
3nug_A	247	Crystal Structure Of Wild Type Tetrameric Pyridoxal		1e-04
4iqg_C	271	Crystal Structure Of Bpro0239 Oxidoreductase From P		2e-04
2hrb_A	274	Crystal Structure Of Human Carbonyl Reductase 3, Co		2e-04
3qiv_A	253	Crystal Structure Of A Putative Short-Chain Dehydro		2e-04
3ndr_A	247	Crystal Structure Of Tetrameric Pyridoxal 4-Dehydro		2e-04
3q6i_A	446	Crystal Structure Of Fabg4 And Coenzyme Binary Comp		4e-04
3lf1_A	265	Apo Structure Of The Short Chain Oxidoreductase Q9h		4e-04
3tzh_A	251	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		4e-04
4fw8_A	454	Crystal Structure Of Fabg4 Complexed With Coenzyme		4e-04
3lls_A	475	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		4e-04
3v1t_C	462	Crystal Structure Of A Putative Ketoacyl Reductase		5e-04
3m1l_A	432	Crystal Strucutre Of A C-Terminal Trunacted Mutant		5e-04
3l77_A	235	X-Ray Structure Alcohol Dehydrogenase From Archaeon		5e-04
1i01_A	244	Crystal Structure Of Beta-Ketoacyl [acyl Carrier Pr		5e-04
3tn7_A	257	Crystal Structure Of Short-Chain Alcohol Dehydrogen		5e-04
3m1a_A	281	The Crystal Structure Of A Short-Chain Dehydrogenas		8e-04
2pnf_A	248	Structure Of Aquifex Aeolicus Fabg 3-oxoacyl-(acyl-		9e-04

>pdb|3RD5|A Chain A, Crystal Structure Of A Putative Uncharacterized Protein From Mycobacterium Paratuberculosis Length = 291

Iteration: 1
 Score =  110 bits (275), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 77/207 (37%), Positives = 104/207 (50%), Gaps = 22/207 (10%)
Query: 3   IVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSS 62
           +VITGA SG+G  TAR LA RG  V+M VRD   G+    T+     + +V+  ELDL  
Sbjct: 19  VVITGANSGLGAVTARELARRGATVIMAVRDTRKGEAAARTM-----AGQVEVRELDLQD 73
Query: 63  LASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQFAXXXXXXXXXXXXXXDT 122
           L+SVR FA   +      ++LINNAGIM  P+ L+ D  E Q                  
Sbjct: 74  LSSVRRFADGVS----GADVLINNAGIMAVPYALTVDGFESQIGTNHLGHFALTNLLLPR 129
Query: 123 MKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPS-GYNGFRAYSQSKLANILHAN 181
           +           R++ VSS  H   +   I  + +N  S  Y+ + AYSQSKLAN+L  +
Sbjct: 130 LTD---------RVVTVSSMAH---WPGRINLEDLNWRSRRYSPWLAYSQSKLANLLFTS 177
Query: 182 ELARRLKEDGVDITANSVHPGAIATNI 208
           EL RRL   G  + A + HPG   TN+
Sbjct: 178 ELQRRLTAAGSPLRALAAHPGYSHTNL 204

>pdb|1XHL|A Chain A, Crystal Structure Of Putative Tropinone Reductase-Ii From Caenorhabditis Elegans With Cofactor And Substrate Length = 297

Iteration: 1
 Score = 57.4 bits (137), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 59/240 (24%), Positives = 107/240 (44%), Gaps = 35/240 (14%)
Query: 3   IVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKE-IPSAKVDAMELDLS 61
           ++ITG+++GIG   A + A  G  V +  R+    ++ K+ I+K  +P+ K++A+  D++
Sbjct: 29  VIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVT 88
Query: 62  SLASVRNFASEYNIQHHQLNILINNAGIM---GT-----PFMLSKDNIELQFAXXXXXXX 113
             +   +  +    +  +++IL+NNAG     GT     P  L +   +L F        
Sbjct: 89  EASGQDDIINTTLAKFGKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQAVIEM-- 146
Query: 114 XXXXXXXDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSK 173
                   T K        +G I+NVSS               +  P  ++G+  Y+ +K
Sbjct: 147 --------TQKTKEHLIKTKGEIVNVSS--------------IVAGPQAHSGYPYYACAK 184
Query: 174 LANILHANELARRLKEDGVDITANSVHPGAIATNIIRHNSLFRSMNTILHALPGIAGKCL 233
            A   +    A  L + GV +  NSV PGA+AT  +    L  + +  L++  G   +C+
Sbjct: 185 AALDQYTRCTAIDLIQHGVRV--NSVSPGAVATGFMGAMGLPETASDKLYSFIGSRKECI 242

>pdb|3CSD|B Chain B, Actinorhodin Polyketide Ketoreductase Mutant P94l Bound To Nadph And The Inhibitor Emodin Length = 281

Iteration: 1
 Score = 52.8 bits (125), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 55/207 (26%), Positives = 84/207 (40%), Gaps = 24/207 (11%)
Query: 4   VITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKV--DAMELDLS 61
           ++TGATSGIG E AR L   G+ V +  R    G++   T +KE+  A V  D    D+ 
Sbjct: 30  LVTGATSGIGLEIARRLGKEGLRVFVCAR----GEEGLRTTLKELREAGVEADGRTCDVR 85
Query: 62  SLASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQFAXXXXXXXXXXXXXXD 121
           S+  +    +    ++  +++L+NNAG +G        + EL                  
Sbjct: 86  SVPEIEALVAAVVERYGPVDVLVNNAGRLGGGATAELAD-ELWLDVVETNLTGVFRVTKQ 144
Query: 122 TMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANILHAN 181
            +K       G GRI+N++S G +                G      YS SK   +    
Sbjct: 145 VLKAGGMLERGTGRIVNIASTGGK---------------QGVVHAAPYSASKHGVVGFTK 189
Query: 182 ELARRLKEDGVDITANSVHPGAIATNI 208
            L   L   G  IT N+V PG + T +
Sbjct: 190 ALGLELARTG--ITVNAVCPGFVETPM 214

>pdb|2RHR|B Chain B, P94l Actinorhodin Ketordeuctase Mutant, With Nadph And Inhibitor Emodin Length = 277

Iteration: 1
 Score = 52.8 bits (125), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 55/207 (26%), Positives = 84/207 (40%), Gaps = 24/207 (11%)
Query: 4   VITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKV--DAMELDLS 61
           ++TGATSGIG E AR L   G+ V +  R    G++   T +KE+  A V  D    D+ 
Sbjct: 26  LVTGATSGIGLEIARRLGKEGLRVFVCAR----GEEGLRTTLKELREAGVEADGRTCDVR 81
Query: 62  SLASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQFAXXXXXXXXXXXXXXD 121
           S+  +    +    ++  +++L+NNAG +G        + EL                  
Sbjct: 82  SVPEIEALVAAVVERYGPVDVLVNNAGRLGGGATAELAD-ELWLDVVETNLTGVFRVTKQ 140
Query: 122 TMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANILHAN 181
            +K       G GRI+N++S G +                G      YS SK   +    
Sbjct: 141 VLKAGGMLERGTGRIVNIASTGGK---------------QGVVHAAPYSASKHGVVGFTK 185
Query: 182 ELARRLKEDGVDITANSVHPGAIATNI 208
            L   L   G  IT N+V PG + T +
Sbjct: 186 ALGLELARTG--ITVNAVCPGFVETPM 210

>pdb|2EW8|A Chain A, Crystal Structure Of The (s)-specific 1-phenylethanol Dehydrogenase Of The Denitrifying Bacterium Strain Ebn1 Length = 249

Iteration: 1
 Score = 52.0 bits (123), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 60/228 (26%), Positives = 95/228 (41%), Gaps = 31/228 (13%)
Query: 4   VITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSL 63
           VITG  +GIG   A   A+ G  +   + D+    +  E  ++ +   +V  ++ D+S  
Sbjct: 11  VITGGANGIGRAIAERFAVEGADI--AIADLVPAPEA-EAAIRNL-GRRVLTVKCDVSQP 66
Query: 64  ASVRNFASEYNIQHHQLNILINNAGIMG-TPF-MLSKDNIELQFAXXXXXXXXXXXXXXD 121
             V  F  +      + +IL+NNAGI    PF  L+ +  +  F                
Sbjct: 67  GDVEAFGKQVISTFGRCDILVNNAGIYPLIPFDELTFEQWKKTFEINVDSGFLMAKAFVP 126
Query: 122 TMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANILHAN 181
            MK+      G GRIIN++S  + L         KI        +  Y  +K ANI    
Sbjct: 127 GMKRN-----GWGRIINLTSTTYWL---------KI------EAYTHYISTKAANIGFTR 166
Query: 182 ELARRLKEDGVDITANSVHPGAIATNIIRHNSL---FRSMNTILHALP 226
            LA  L +DG  IT N++ P  + T     ++L   F  +  +L A+P
Sbjct: 167 ALASDLGKDG--ITVNAIAPSLVRTATTEASALSAMFDVLPNMLQAIP 212

>pdb|4DC0|A Chain A, Crystal Structure Of F189w Actinorhodin Polyketide Ketoreductase With Nadph Length = 281

Iteration: 1
 Score = 51.6 bits (122), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 55/207 (26%), Positives = 83/207 (40%), Gaps = 24/207 (11%)
Query: 4   VITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKV--DAMELDLS 61
           ++TGATSGIG E AR L   G+ V +  R    G++   T +KE+  A V  D    D+ 
Sbjct: 30  LVTGATSGIGLEIARRLGKEGLRVFVCAR----GEEGLRTTLKELREAGVEADGRTCDVR 85
Query: 62  SLASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQFAXXXXXXXXXXXXXXD 121
           S+  +    +    ++  +++L+NNAG  G        + EL                  
Sbjct: 86  SVPEIEALVAAVVERYGPVDVLVNNAGRPGGGATAELAD-ELWLDVVETNLTGVFRVTKQ 144
Query: 122 TMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANILHAN 181
            +K       G GRI+N++S G +                G      YS SK   +    
Sbjct: 145 VLKAGGMLERGTGRIVNIASTGGK---------------QGVVHAAPYSASKHGVVGFTK 189
Query: 182 ELARRLKEDGVDITANSVHPGAIATNI 208
            L   L   G  IT N+V PG + T +
Sbjct: 190 ALGLELARTG--ITVNAVCPGWVETPM 214

>pdb|4DC1|A Chain A, Crystal Structure Of Y202f Actinorhodin Polyketide Ketoreductase With Nadph Length = 281

Iteration: 1
 Score = 51.2 bits (121), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 55/207 (26%), Positives = 83/207 (40%), Gaps = 24/207 (11%)
Query: 4   VITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKV--DAMELDLS 61
           ++TGATSGIG E AR L   G+ V +  R    G++   T +KE+  A V  D    D+ 
Sbjct: 30  LVTGATSGIGLEIARRLGKEGLRVFVCAR----GEEGLRTTLKELREAGVEADGRTCDVR 85
Query: 62  SLASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQFAXXXXXXXXXXXXXXD 121
           S+  +    +    ++  +++L+NNAG  G        + EL                  
Sbjct: 86  SVPEIEALVAAVVERYGPVDVLVNNAGRPGGGATAELAD-ELWLDVVETNLTGVFRVTKQ 144
Query: 122 TMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANILHAN 181
            +K       G GRI+N++S G +                G      YS SK   +    
Sbjct: 145 VLKAGGMLERGTGRIVNIASTGGK---------------QGVVHAAPYSASKHGVVGFTK 189
Query: 182 ELARRLKEDGVDITANSVHPGAIATNI 208
            L   L   G  IT N+V PG + T +
Sbjct: 190 ALGLELARTG--ITVNAVCPGFVETPM 214

>pdb|1W4Z|A Chain A, Structure Of Actinorhodin Polyketide (Actiii) Reductase Length = 281

Iteration: 1
 Score = 51.2 bits (121), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 55/207 (26%), Positives = 83/207 (40%), Gaps = 24/207 (11%)
Query: 4   VITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKV--DAMELDLS 61
           ++TGATSGIG E AR L   G+ V +  R    G++   T +KE+  A V  D    D+ 
Sbjct: 30  LVTGATSGIGLEIARRLGKEGLRVFVCAR----GEEGLRTTLKELREAGVEADGRTCDVR 85
Query: 62  SLASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQFAXXXXXXXXXXXXXXD 121
           S+  +    +    ++  +++L+NNAG  G        + EL                  
Sbjct: 86  SVPEIEALVAAVVERYGPVDVLVNNAGRPGGGATAELAD-ELWLDVVETNLTGVFRVTKQ 144
Query: 122 TMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANILHAN 181
            +K       G GRI+N++S G +                G      YS SK   +    
Sbjct: 145 VLKAGGMLERGTGRIVNIASTGGK---------------QGVVHAAPYSASKHGVVGFTK 189
Query: 182 ELARRLKEDGVDITANSVHPGAIATNI 208
            L   L   G  IT N+V PG + T +
Sbjct: 190 ALGLELARTG--ITVNAVCPGFVETPM 214

>pdb|4DBZ|A Chain A, Crystal Structure Of V151l Actinorhodin Polyketide Ketoreductase With Nadph Length = 281

Iteration: 1
 Score = 51.2 bits (121), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 55/207 (26%), Positives = 83/207 (40%), Gaps = 24/207 (11%)
Query: 4   VITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKV--DAMELDLS 61
           ++TGATSGIG E AR L   G+ V +  R    G++   T +KE+  A V  D    D+ 
Sbjct: 30  LVTGATSGIGLEIARRLGKEGLRVFVCAR----GEEGLRTTLKELREAGVEADGRTCDVR 85
Query: 62  SLASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQFAXXXXXXXXXXXXXXD 121
           S+  +    +    ++  +++L+NNAG  G        + EL                  
Sbjct: 86  SVPEIEALVAAVVERYGPVDVLVNNAGRPGGGATAELAD-ELWLDVVETNLTGVFRVTKQ 144
Query: 122 TMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANILHAN 181
            +K       G GRI+N++S G +                G      YS SK   +    
Sbjct: 145 VLKAGGMLERGTGRIVNIASTGGK---------------QGLVHAAPYSASKHGVVGFTK 189
Query: 182 ELARRLKEDGVDITANSVHPGAIATNI 208
            L   L   G  IT N+V PG + T +
Sbjct: 190 ALGLELARTG--ITVNAVCPGFVETPM 214

>pdb|1X7G|A Chain A, Actinorhodin Polyketide Ketoreductase, Act Kr, With Nadp Bound Length = 261

Iteration: 1
 Score = 51.2 bits (121), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 55/207 (26%), Positives = 83/207 (40%), Gaps = 24/207 (11%)
Query: 4   VITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKV--DAMELDLS 61
           ++TGATSGIG E AR L   G+ V +  R    G++   T +KE+  A V  D    D+ 
Sbjct: 10  LVTGATSGIGLEIARRLGKEGLRVFVCAR----GEEGLRTTLKELREAGVEADGRTCDVR 65
Query: 62  SLASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQFAXXXXXXXXXXXXXXD 121
           S+  +    +    ++  +++L+NNAG  G        + EL                  
Sbjct: 66  SVPEIEALVAAVVERYGPVDVLVNNAGRPGGGATAELAD-ELWLDVVETNLTGVFRVTKQ 124
Query: 122 TMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANILHAN 181
            +K       G GRI+N++S G +                G      YS SK   +    
Sbjct: 125 VLKAGGMLERGTGRIVNIASTGGK---------------QGVVHAAPYSASKHGVVGFTK 169
Query: 182 ELARRLKEDGVDITANSVHPGAIATNI 208
            L   L   G  IT N+V PG + T +
Sbjct: 170 ALGLELARTG--ITVNAVCPGFVETPM 194

>pdb|3RKU|A Chain A, Substrate Fingerprint And The Structure Of Nadp+ Dependent Serine Dehydrogenase From Saccharomyces Cerevisiae Complexed With Nadp+ Length = 287

Iteration: 1
 Score = 50.8 bits (120), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 29/89 (32%), Positives = 54/89 (60%), Gaps = 3/89 (3%)
Query: 3   IVITGATSGIGTETA--RVLALRG-VHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELD 59
           ++ITGA++GIG  TA   + A  G + +++  R +   +++K+TI +E P+AKV   +LD
Sbjct: 36  VLITGASAGIGKATALEYLEASNGDMKLILAARRLEKLEELKKTIDQEFPNAKVHVAQLD 95
Query: 60  LSSLASVRNFASEYNIQHHQLNILINNAG 88
           ++    ++ F      +   ++IL+NNAG
Sbjct: 96  ITQAEKIKPFIENLPQEFKDIDILVNNAG 124

>pdb|2RH4|A Chain A, Actinorhodin Ketoreductase, Actkr, With Nadph And Inhibitor Emodin Length = 277

Iteration: 1
 Score = 50.8 bits (120), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 55/207 (26%), Positives = 83/207 (40%), Gaps = 24/207 (11%)
Query: 4   VITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKV--DAMELDLS 61
           ++TGATSGIG E AR L   G+ V +  R    G++   T +KE+  A V  D    D+ 
Sbjct: 26  LVTGATSGIGLEIARRLGKEGLRVFVCAR----GEEGLRTTLKELREAGVEADGRTCDVR 81
Query: 62  SLASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQFAXXXXXXXXXXXXXXD 121
           S+  +    +    ++  +++L+NNAG  G        + EL                  
Sbjct: 82  SVPEIEALVAAVVERYGPVDVLVNNAGRPGGGATAELAD-ELWLDVVETNLTGVFRVTKQ 140
Query: 122 TMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANILHAN 181
            +K       G GRI+N++S G +                G      YS SK   +    
Sbjct: 141 VLKAGGMLERGTGRIVNIASTGGK---------------QGVVHAAPYSASKHGVVGFTK 185
Query: 182 ELARRLKEDGVDITANSVHPGAIATNI 208
            L   L   G  IT N+V PG + T +
Sbjct: 186 ALGLELARTG--ITVNAVCPGFVETPM 210

>pdb|3LYL|A Chain A, Structure Of 3-Oxoacyl-Acylcarrier Protein Reductase, Fabg From Francisella Tularensis Length = 247

Iteration: 1
 Score = 49.7 bits (117), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 57/204 (27%), Positives = 88/204 (43%), Gaps = 22/204 (10%)
Query: 4   VITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSL 63
           ++TGA+ GIG E A  LA +G  VV G     A  +  E   KE    K   + L++S +
Sbjct: 9   LVTGASRGIGFEVAHALASKGATVV-GTATSQASAEKFENSXKE-KGFKARGLVLNISDI 66
Query: 64  ASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQFAXXXXXXXXXXXXXXDTM 123
            S++NF +E   ++  ++IL+NNAGI            E Q +              + +
Sbjct: 67  ESIQNFFAEIKAENLAIDILVNNAGITRDNLXXRXSEDEWQ-SVINTNLSSIFRXSKECV 125
Query: 124 KKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANILHANEL 183
           +   +K    GRII++ S               +   +G  G   Y  +K   I  +  L
Sbjct: 126 RGXXKKR--WGRIISIGS---------------VVGSAGNPGQTNYCAAKAGVIGFSKSL 168
Query: 184 ARRLKEDGVDITANSVHPGAIATN 207
           A  +     +IT N V PG IAT+
Sbjct: 169 AYEVASR--NITVNVVAPGFIATD 190

>pdb|1XG5|A Chain A, Structure Of Human Putative Dehydrogenase Mgc4172 In Complex With Nadp Length = 279

Iteration: 1
 Score = 48.9 bits (115), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 56/212 (26%), Positives = 87/212 (41%), Gaps = 28/212 (13%)
Query: 4   VITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDA----MELD 59
           ++TGA+ GIG   AR L  +G+ VV   R +    +++E +  E  SA           D
Sbjct: 36  LVTGASGGIGAAVARALVQQGLKVVGCARTVG---NIEE-LAAECKSAGYPGTLIPYRCD 91
Query: 60  LSSLASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQ--FAXXXXXXXXXXX 117
           LS+   + +  S    QH  ++I INNAG+     +LS      +  F            
Sbjct: 92  LSNEEDILSMFSAIRSQHSGVDICINNAGLARPDTLLSGSTSGWKDMFNVNVLALSICTR 151
Query: 118 XXXDTMKKTARKSGGEGRIINVSS-EGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLAN 176
               +MK+   ++  +G IIN++S  GHR+             P     F  YS +K A 
Sbjct: 152 EAYQSMKE---RNVDDGHIININSMSGHRVL------------PLSVTHF--YSATKYAV 194
Query: 177 ILHANELARRLKEDGVDITANSVHPGAIATNI 208
                 L + L+E    I A  + PG + T  
Sbjct: 195 TALTEGLRQELREAQTHIRATCISPGVVETQF 226

>pdb|4E3Z|A Chain A, Crystal Structure Of A Oxidoreductase From Rhizobium Etli Cfn 42 Length = 272

Iteration: 1
 Score = 48.9 bits (115), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 54/209 (25%), Positives = 96/209 (45%), Gaps = 22/209 (10%)
Query: 3   IVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMEL--DL 60
           +++TG + GIG    R+ A +G  V  GV + AA ++  + +V  I  +  +A+ +  D+
Sbjct: 29  VLVTGGSRGIGAAVCRLAARQGWRV--GV-NYAANREAADAVVAAITESGGEAVAIPGDV 85
Query: 61  SSLASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQFAXXXXXXXXXXXXXX 120
            + A +    S  + Q  +L+ L+NNAGI+  P  + + ++E                  
Sbjct: 86  GNAADIAAXFSAVDRQFGRLDGLVNNAGIVDYPQRVDEXSVERIERXLRVNVTGSILCAA 145
Query: 121 DTMKKTAR-KSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANILH 179
           + +++ +R  SG  G I+NVSS    L                   +  Y+ SK A    
Sbjct: 146 EAVRRXSRLYSGQGGAIVNVSSXAAILGSA--------------TQYVDYAASKAAIDTF 191
Query: 180 ANELARRLKEDGVDITANSVHPGAIATNI 208
              LAR +  +G+ +  N+V PG I T++
Sbjct: 192 TIGLAREVAAEGIRV--NAVRPGIIETDL 218

>pdb|3RKR|A Chain A, Crystal Structure Of A Metagenomic Short-Chain Oxidoreductase (Sdr) In Complex With Nadp Length = 262

Iteration: 1
 Score = 48.1 bits (113), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 31/93 (33%), Positives = 48/93 (51%), Gaps = 4/93 (4%)
Query: 4   VITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSL 63
           V+TGA+ GIG   AR L   G  VV+  RD+   + V+  IV      + ++   DLS  
Sbjct: 33  VVTGASRGIGAAIARKLGSLGARVVLTARDVEKLRAVEREIVAA--GGEAESHACDLSHS 90
Query: 64  ASVRNFASEYNIQHHQLNILINNAGI--MGTPF 94
            ++  FA+     H + ++L+NNAG+   G P 
Sbjct: 91  DAIAAFATGVLAAHGRCDVLVNNAGVGWFGGPL 123

>pdb|2C07|A Chain A, Oxoacyl-Acp Reductase Of Plasmodium Falciparum Length = 285

Iteration: 1
 Score = 46.6 bits (109), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 54/207 (26%), Positives = 88/207 (42%), Gaps = 26/207 (12%)
Query: 4   VITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMEL--DLS 61
           ++TGA  GIG E A++LA    HV+     I+  +   +++V EI S   ++     D+S
Sbjct: 48  LVTGAGRGIGREIAKMLAKSVSHVIC----ISRTQKSCDSVVDEIKSFGYESSGYAGDVS 103
Query: 62  SLASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQFAXXXXXXXXXXXXXXD 121
               +    ++   +H  ++IL+NNAGI      L   N E +                 
Sbjct: 104 KKEEISEVINKILTEHKNVDILVNNAGITRDNLFLRMKNDEWEDVLRTNLNSLFYITQPI 163
Query: 122 TMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANILHAN 181
           + +    +    GRIIN+SS               I   +G  G   YS SK   I    
Sbjct: 164 SKRMINNRY---GRIINISS---------------IVGLTGNVGQANYSSSKAGVIGFTK 205
Query: 182 ELARRLKEDGVDITANSVHPGAIATNI 208
            LA+ L     +IT N++ PG I++++
Sbjct: 206 SLAKELASR--NITVNAIAPGFISSDM 230

>pdb|3SJ7|A Chain A, Structure Of Beta-Ketoacetyl-Coa Reductase (Fabg) From Staphylococcus Aureus Complex With Nadph Length = 252

Iteration: 1
 Score = 46.2 bits (108), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 55/207 (26%), Positives = 87/207 (42%), Gaps = 25/207 (12%)
Query: 4   VITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVD--AMELDLS 61
           ++TGA+ GIG   A  LA  G +V +   + A  K+  E +V+EI +  VD  A++ +++
Sbjct: 14  LVTGASRGIGRSIALQLAEEGYNVAV---NYAGSKEKAEAVVEEIKAKGVDSFAIQANVA 70
Query: 62  SLASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQFAXXXXXXXXXXXXXXD 121
               V+    E   Q   L++L+NNAGI     ++     E                   
Sbjct: 71  DADEVKAMIKEVVSQFGSLDVLVNNAGITRDNLLMRMKEQEWDDVIDTNLKGVFNCIQKA 130
Query: 122 TMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANILHAN 181
           T +   ++SG    IIN+SS               + +P   N    Y  +K   I    
Sbjct: 131 TPQMLRQRSGA---IINLSS-----------VVGAVGNPGQAN----YVATKAGVIGLTK 172
Query: 182 ELARRLKEDGVDITANSVHPGAIATNI 208
             AR L   G  IT N+V PG I +++
Sbjct: 173 SAARELASRG--ITVNAVAPGFIVSDM 197

>pdb|3U5T|A Chain A, The Crystal Structure Of 3-Oxoacyl-[acyl-Carrier-Protein] Reductase From Sinorhizobium Meliloti Length = 267

Iteration: 1
 Score = 46.2 bits (108), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 56/208 (26%), Positives = 92/208 (44%), Gaps = 27/208 (12%)
Query: 4   VITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAM--ELDLS 61
           ++TGA+ GIG   A  LA  G  VV+     AA     E +  +I +A   A+  + D+S
Sbjct: 31  IVTGASRGIGAAIAARLASDGFTVVINYAGKAA---AAEEVAGKIEAAGGKALTAQADVS 87
Query: 62  SLASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQFAXXXXXXXXXXXXXXD 121
             A+VR   +        +++L+NNAGI   P     +  +  F               +
Sbjct: 88  DPAAVRRLFATAEEAFGGVDVLVNNAGIX--PLTTIAETGDAVF---DRVIAVNLKGTFN 142
Query: 122 TMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANILHAN 181
           T+++ A++    GRIIN S+    L +           PS    +  Y+ +K       +
Sbjct: 143 TLREAAQRLRVGGRIINXSTSQVGLLH-----------PS----YGIYAAAKAGVEAXTH 187
Query: 182 ELARRLKEDGVDITANSVHPGAIATNII 209
            L++ L+  G DIT N+V PG  AT++ 
Sbjct: 188 VLSKELR--GRDITVNAVAPGPTATDLF 213

>pdb|3O26|A Chain A, The Structure Of Salutaridine Reductase From Papaver Somniferum Length = 311

Iteration: 1
 Score = 46.2 bits (108), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 29/89 (32%), Positives = 48/89 (53%), Gaps = 2/89 (2%)
Query: 4   VITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLS-S 62
           V+TG   GIG E  + L+  G+ VV+  RD+  G +  E + K      V   +LD++  
Sbjct: 16  VVTGGNKGIGFEICKQLSSNGIMVVLTCRDVTKGHEAVEKL-KNSNHENVVFHQLDVTDP 74
Query: 63  LASVRNFASEYNIQHHQLNILINNAGIMG 91
           +A++ + A        +L+IL+NNAG+ G
Sbjct: 75  IATMSSLADFIKTHFGKLDILVNNAGVAG 103

>pdb|1WMB|A Chain A, Crystal Structure Of Nad Dependent D-3-Hydroxybutylate Dehydrogenase Length = 260

Iteration: 1
 Score = 45.8 bits (107), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 58/210 (27%), Positives = 86/210 (40%), Gaps = 26/210 (12%)
Query: 4   VITGATSGIGTETARVLALRGVHVVM-GVRDIAAGKDVKETIVKEIPSAKVDAMELDLSS 62
           V+TG+TSGIG   A  LA +G  +V+ G  D A  + V+  +  +    KV     DLS 
Sbjct: 8   VVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQ-HGVKVLYDGADLSK 66
Query: 63  LASVRNFASEYNIQHHQLNILINNAGIMGTPFM--LSKDNIELQFAXXXXXXXXXXXXXX 120
             +VR        Q  +++IL+NNAGI  T  +     +  +   A              
Sbjct: 67  GEAVRGLVDNAVRQMGRIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTAAAL 126
Query: 121 DTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANILHA 180
             MKK      G GRIIN++S  H L      +   +    G  GF   +          
Sbjct: 127 PHMKKQ-----GFGRIINIASA-HGLVASAN-KSAYVAAKHGVVGFTKVTA--------- 170
Query: 181 NELARRLKEDGVDITANSVHPGAIATNIIR 210
                 L+  G  ITAN++ PG + T ++ 
Sbjct: 171 ------LETAGQGITANAICPGWVRTPLVE 194

>pdb|3TFO|A Chain A, Crystal Structure Of A Putative 3-Oxoacyl-(Acyl-Carrier-Protein) Reductase From Sinorhizobium Meliloti Length = 264

Iteration: 1
 Score = 45.4 bits (106), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 61/230 (26%), Positives = 94/230 (40%), Gaps = 45/230 (19%)
Query: 3   IVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAME--LDL 60
           I+ITGA+ GIG   AR L + G  +++G R  A      E I  EI  A   A+   LD+
Sbjct: 7   ILITGASGGIGEGIARELGVAGAKILLGARRQAR----IEAIATEIRDAGGTALAQVLDV 62
Query: 61  SSLASVRNFASEYNIQHHQLNILINNAGIMG-TPFMLSK-DNIELQFAXXXXXXXXXXXX 118
           +   SV  FA        ++++L+NNAG+M  +P    K D  E                
Sbjct: 63  TDRHSVAAFAQAAVDTWGRIDVLVNNAGVMPLSPLAAVKVDEWERMIDVNIKGVLWGIGA 122
Query: 119 XXDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANIL 178
               M+  A++S   G+IIN+ S G                        A S    A + 
Sbjct: 123 VLPIME--AQRS---GQIINIGSIG------------------------ALSVVPTAAVY 153
Query: 179 HANELARR-----LKEDGVDITANSVHPGAIATNI---IRHNSLFRSMNT 220
            A + A R     L+++  +I    V+PG + + +   I H     +M+T
Sbjct: 154 CATKFAVRAISDGLRQESTNIRVTCVNPGVVESELAGTITHEETMAAMDT 203

>pdb|2GDZ|A Chain A, Crystal Structure Of 15-Hydroxyprostaglandin Dehydrogenase Type1, Complexed With Nad+ Length = 267

Iteration: 1
 Score = 45.1 bits (105), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 50/208 (24%), Positives = 84/208 (40%), Gaps = 25/208 (12%)
Query: 4   VITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSL 63
           ++TGA  GIG   A  L L+G  V +   ++ AG   K  + ++    K   ++ D++  
Sbjct: 11  LVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQ 70
Query: 64  ASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQFAXXXXXXXXXXXXXXDTM 123
             +R+   +      +L+IL+NNAG+       ++ N E                  D M
Sbjct: 71  QQLRDTFRKVVDHFGRLDILVNNAGVN------NEKNWEKTLQINLVSVISGTYLGLDYM 124
Query: 124 KKTARKSGGEGR-IINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANILHANE 182
            K   ++GGEG  IIN+SS    +             P         S+  +     +  
Sbjct: 125 SK---QNGGEGGIIINMSSLAGLM-------------PVAQQPVYCASKHGIVGFTRSAA 168
Query: 183 LARRLKEDGVDITANSVHPGAIATNIIR 210
           LA  L   GV +  N++ PG + T I+ 
Sbjct: 169 LAANLMNSGVRL--NAICPGFVNTAILE 194

>pdb|2ZTM|A Chain A, T190s Mutant Of D-3-Hydroxybutyrate Dehydrogenase Length = 260

Iteration: 1
 Score = 44.7 bits (104), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 57/210 (27%), Positives = 86/210 (40%), Gaps = 26/210 (12%)
Query: 4   VITGATSGIGTETARVLALRGVHVVM-GVRDIAAGKDVKETIVKEIPSAKVDAMELDLSS 62
           V+TG+TSGIG   A  LA +G  +V+ G  D A  + V+  +  +    KV     DLS 
Sbjct: 8   VVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQ-HGVKVLYDGADLSK 66
Query: 63  LASVRNFASEYNIQHHQLNILINNAGIMGTPFM--LSKDNIELQFAXXXXXXXXXXXXXX 120
             +VR        Q  +++IL+NNAGI  T  +     +  +   A              
Sbjct: 67  GEAVRGLVDNAVRQMGRIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTAAAL 126
Query: 121 DTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANILHA 180
             MKK      G GRIIN++S  H L      +   +    G  GF   +          
Sbjct: 127 PHMKKQ-----GFGRIINIASA-HGLVASAN-KSAYVAAKHGVVGFTKVTA--------- 170
Query: 181 NELARRLKEDGVDITANSVHPGAIATNIIR 210
                 L+  G  ITAN++ PG + + ++ 
Sbjct: 171 ------LETAGQGITANAICPGWVRSPLVE 194

>pdb|3SJU|A Chain A, Hedamycin Polyketide Ketoreductase Bound To Nadph Length = 279

Iteration: 1
 Score = 44.3 bits (103), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 50/205 (24%), Positives = 81/205 (39%), Gaps = 22/205 (10%)
Query: 5   ITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVK-EIPSAKVDAMELDLSSL 63
           +TG +SGIG   AR LA RG+ V    RD    K+V   +         VD    D++S 
Sbjct: 29  VTGVSSGIGLAVARTLAARGIAVYGCARDA---KNVSAAVDGLRAAGHDVDGSSCDVTST 85
Query: 64  ASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQFAXXXXXXXXXXXXXXDTM 123
             V    +    +   + IL+N+AG  G       D+  L                 + +
Sbjct: 86  DEVHAAVAAAVERFGPIGILVNSAGRNGGGETADLDD-ALWADVLDTNLTGVFRVTREVL 144
Query: 124 KKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANILHANEL 183
           +    +  G GRI+N++S G +    +G+ +              Y+ SK   +     +
Sbjct: 145 RAGGMREAGWGRIVNIASTGGK----QGVMYAA-----------PYTASKHGVVGFTKSV 189
Query: 184 ARRLKEDGVDITANSVHPGAIATNI 208
              L + G  IT N+V PG + T +
Sbjct: 190 GFELAKTG--ITVNAVCPGYVETPM 212

>pdb|3OSU|A Chain A, Crystal Structure Of The 3-Oxoacyl-Acyl Carrier Protein Reductase, Fabg, From Staphylococcus Aureus Length = 246

Iteration: 1
 Score = 44.3 bits (103), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 55/206 (26%), Positives = 85/206 (41%), Gaps = 25/206 (12%)
Query: 4   VITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVD--AMELDLS 61
           ++TGA+ GIG   A  LA  G +V +   + A  K+  E +V+EI +  VD  A++ +++
Sbjct: 8   LVTGASRGIGRSIALQLAEEGYNVAV---NYAGSKEKAEAVVEEIKAKGVDSFAIQANVA 64
Query: 62  SLASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQFAXXXXXXXXXXXXXXD 121
               V+    E   Q   L++L+NNAGI     +      E                   
Sbjct: 65  DADEVKAXIKEVVSQFGSLDVLVNNAGITRDNLLXRXKEQEWDDVIDTNLKGVFNCIQKA 124
Query: 122 TMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANILHAN 181
           T +   ++SG    IIN+SS               + +P   N    Y  +K   I    
Sbjct: 125 TPQXLRQRSGA---IINLSS-----------VVGAVGNPGQAN----YVATKAGVIGLTK 166
Query: 182 ELARRLKEDGVDITANSVHPGAIATN 207
             AR L   G  IT N+V PG I ++
Sbjct: 167 SAARELASRG--ITVNAVAPGFIVSD 190

>pdb|2ZTU|A Chain A, T190a Mutant Of D-3-Hydroxybutyrate Dehydrogenase Complexed With Nad+ Length = 260

Iteration: 1
 Score = 43.9 bits (102), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 57/210 (27%), Positives = 85/210 (40%), Gaps = 26/210 (12%)
Query: 4   VITGATSGIGTETARVLALRGVHVVM-GVRDIAAGKDVKETIVKEIPSAKVDAMELDLSS 62
           V+TG+TSGIG   A  LA +G  +V+ G  D A  + V+  +  +    KV     DLS 
Sbjct: 8   VVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQ-HGVKVLYDGADLSK 66
Query: 63  LASVRNFASEYNIQHHQLNILINNAGIMGTPFM--LSKDNIELQFAXXXXXXXXXXXXXX 120
             +VR        Q  +++IL+NNAGI  T  +     +  +   A              
Sbjct: 67  GEAVRGLVDNAVRQMGRIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTAAAL 126
Query: 121 DTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANILHA 180
             MKK      G GRIIN++S  H L      +   +    G  GF   +          
Sbjct: 127 PHMKKQ-----GFGRIINIASA-HGLVASAN-KSAYVAAKHGVVGFTKVTA--------- 170
Query: 181 NELARRLKEDGVDITANSVHPGAIATNIIR 210
                 L+  G  ITAN++ PG +   ++ 
Sbjct: 171 ------LETAGQGITANAICPGWVRAPLVE 194

>pdb|3PK0|A Chain A, Crystal Structure Of Short-Chain DehydrogenaseREDUCTASE SDR FROM Mycobacterium Smegmatis Length = 262

Iteration: 1
 Score = 43.9 bits (102), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 52/215 (24%), Positives = 85/215 (39%), Gaps = 30/215 (13%)
Query: 3   IVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETI--VKEIPSAKVDAMELDL 60
           +V+TG T GIG   A V A  G +V +  R  A   D+   +  + ++ S KV  ++ D+
Sbjct: 13  VVVTGGTKGIGRGIATVFARAGANVAVAGRSTA---DIDACVADLDQLGSGKVIGVQTDV 69
Query: 61  SSLASVRNFASEYNIQHHQLNILINNAGIMG-TPF-MLSKDNIELQFAXXXXXXXXXXXX 118
           S  A     A     +   ++++  NAG+    P   ++ + +   FA            
Sbjct: 70  SDRAQCDALAGRAVEEFGGIDVVCANAGVFPDAPLATMTPEQLNGIFAVNVNGTFYAVQA 129
Query: 119 XXDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDP-SGYNGFRAYSQSKLANI 177
             D +  +     G GR++  SS               I  P +GY G+  Y  +K A +
Sbjct: 130 CLDALIAS-----GSGRVVLTSS---------------ITGPITGYPGWSHYGATKAAQL 169
Query: 178 LHANELARRLKEDGVDITANSVHPGAIATNIIRHN 212
                 A  L      IT N++ PG I T  +  N
Sbjct: 170 GFMRTAAIELAPH--KITVNAIMPGNIMTEGLLEN 202

>pdb|3NUG|A Chain A, Crystal Structure Of Wild Type Tetrameric Pyridoxal 4-Dehydrogenase From Mesorhizobium Loti Length = 247

Iteration: 1
 Score = 43.5 bits (101), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 59/228 (25%), Positives = 96/228 (42%), Gaps = 30/228 (13%)
Query: 4   VITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSL 63
           ++TGA  GIG   A  LA  G  V++   +    K    +I K     K  A+  D+S  
Sbjct: 10  LVTGAAQGIGKAIAARLAADGATVIVSDINAEGAKAAAASIGK-----KARAIAADISDP 64
Query: 64  ASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQ-FAXXXXXXXXXXXXXXDT 122
            SV+   +E       ++IL+NNA I+  PF ++ D+++L  +                 
Sbjct: 65  GSVKALFAEIQALTGGIDILVNNASIV--PF-VAWDDVDLDHWRKIIDVNLTGTFIVTRA 121
Query: 123 MKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANILHANE 182
                R +G  GR+I+++S                   +G     AY  +K   I     
Sbjct: 122 GTDQMRAAGKAGRVISIASNTFF---------------AGTPNMAAYVAAKGGVIGFTRA 166
Query: 183 LARRLKEDGVDITANSVHPGAIATNIIR---HNSLFRSMNTILHALPG 227
           LA  L +   +ITAN+V PG I ++ ++   HN  F  +  +L A+ G
Sbjct: 167 LATELGK--YNITANAVTPGLIESDGVKASPHNEAFGFVE-MLQAMKG 211

>pdb|4IQG|C Chain C, Crystal Structure Of Bpro0239 Oxidoreductase From Polaromonas Sp. Js666 In Nadp Bound Form Length = 271

Iteration: 1
 Score = 43.1 bits (100), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 52/209 (24%), Positives = 90/209 (43%), Gaps = 22/209 (10%)
Query: 3   IVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSA--KVDAMELDL 60
           ++ITG + GIG  +A + A +G  V +   + A+     + +V++I  A  +  A++ D+
Sbjct: 28  VLITGGSRGIGAASALLAARQGYAVAV---NYASNSAAADEVVRQIREAGGQALAVQADV 84
Query: 61  SSLASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIE-LQFAXXXXXXXXXXXXX 119
           +    V       + Q  +L+ L+NNAG++     +    +E LQ               
Sbjct: 85  AKEREVLAXFETVDAQLGRLSALVNNAGVVDQTTRVDGITLERLQRXFEINVFGSFLCAR 144
Query: 120 XDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANILH 179
               + + R  G  G I+NVSS   RL             P  Y     Y+ +K A    
Sbjct: 145 EAVKRXSTRYGGSGGSIVNVSSAAARL-----------GSPGQYVD---YAAAKGAIDTF 190
Query: 180 ANELARRLKEDGVDITANSVHPGAIATNI 208
              LA+ +  +G+ +  N+V PG I T+I
Sbjct: 191 TLGLAKEVATEGIRV--NAVRPGIIETDI 217

>pdb|2HRB|A Chain A, Crystal Structure Of Human Carbonyl Reductase 3, Complexed With Nadp+ Length = 274

Iteration: 1
 Score = 42.7 bits (99), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 59/246 (23%), Positives = 98/246 (39%), Gaps = 48/246 (19%)
Query: 4   VITGATSGIGTETARVLALR-GVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELD-LS 61
           ++TGA  GIG   AR L  +    VV+  RD+A G+   + +  E  S +   +++D L 
Sbjct: 6   LVTGANRGIGLAIARELCRQFSGDVVLTARDVARGQAAVQQLQAEGLSPRFHQLDIDDLQ 65
Query: 62  SLASVRNFASEYNIQHHQLNILINNAGIM-----GTPFMLSKDNIELQFAXXXXXXXXXX 116
           S+ ++R+F  +   ++  LN+L+NNA +        PF +     E+             
Sbjct: 66  SIRALRDFLRK---EYGGLNVLVNNAAVAFKSDDPMPFDIKA---EMTLKTNFFATRNMC 119
Query: 117 XXXXDTMKKTARKSGGEGRIINVSS------------------------EGHRLAYHEGI 152
                 MK         GR++N+SS                        EG  +   +  
Sbjct: 120 NELLPIMKP-------HGRVVNISSLQCLRAFENCSEDLQERFHSETLTEGDLVDLMKKF 172
Query: 153 RFDKINDPSGYNGF--RAYSQSKLANILHANELARRLKE--DGVDITANSVHPGAIATNI 208
             D  N+     G+    Y  SKL   + +  LARRL E      I  N+  PG + T++
Sbjct: 173 VEDTKNEVHEREGWPNSPYGVSKLGVTVLSRILARRLDEKRKADRILVNACCPGPVKTDM 232
Query: 209 IRHNSL 214
              +S+
Sbjct: 233 DGKDSI 238

>pdb|3QIV|A Chain A, Crystal Structure Of A Putative Short-Chain Dehydrogenase Or 3- Oxoacyl-[acyl-Carrier-Protein] Reductase From Mycobacterium Paratuberculosis Atcc Baa-968 K-10 Length = 253

Iteration: 1
 Score = 42.7 bits (99), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 64/244 (26%), Positives = 95/244 (38%), Gaps = 40/244 (16%)
Query: 4   VITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAME--LDLS 61
           ++TG+  GIG   A  LA  G  VV  V DI A  +  E + K+I +    A+   +D+S
Sbjct: 13  IVTGSGGGIGQAYAEALAREGAAVV--VADINA--EAAEAVAKQIVADGGTAISVAVDVS 68
Query: 62  SLASVRNFASEYNIQHHQLNILINNAGIMG---TPFMLSKDNIELQFAXXXXXXXXXXXX 118
              S +  A     +   ++ L+NNA I G     F+L+ D  E                
Sbjct: 69  DPESAKAMADRTLAEFGGIDYLVNNAAIFGGMKLDFLLTIDP-EYYKKFMSVNLDGALWC 127
Query: 119 XXDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANIL 178
                KK  ++ GG   I+N SS    L Y       K+    G NG             
Sbjct: 128 TRAVYKKMTKRGGGA--IVNQSSTAAWL-YSNYYGLAKV----GINGL------------ 168
Query: 179 HANELARRLKEDGVDITANSVHPGAIATNIIRHNSLFRSMNTILHALP--------GIAG 230
              +L+R L   G +I  N++ PG I T   R  +    ++ I+  LP         + G
Sbjct: 169 -TQQLSRELG--GRNIRINAIAPGPIDTEANRTTTPKEMVDDIVKGLPLSRMGTPDDLVG 225
Query: 231 KCLL 234
            CL 
Sbjct: 226 MCLF 229

>pdb|3NDR|A Chain A, Crystal Structure Of Tetrameric Pyridoxal 4-Dehydrogenase From Mesorhizobium Loti Length = 247

Iteration: 1
 Score = 42.7 bits (99), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 56/216 (25%), Positives = 90/216 (41%), Gaps = 29/216 (13%)
Query: 4   VITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSL 63
           ++TGA  GIG   A  LA  G  V++   +    K    +I K     K  A+  D+S  
Sbjct: 10  LVTGAAQGIGKAIAARLAADGATVIVSDINAEGAKAAAASIGK-----KARAIAADISDP 64
Query: 64  ASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQ-FAXXXXXXXXXXXXXXDT 122
            SV+   +E       ++IL+NNA I+  PF+ + D+++L  +                 
Sbjct: 65  GSVKALFAEIQALTGGIDILVNNASIV--PFV-AWDDVDLDHWRKIIDVNLTGTFIVTRA 121
Query: 123 MKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANILHANE 182
                R +G  GR+I+++S                   +G     AY  +K   I     
Sbjct: 122 GTDQXRAAGKAGRVISIASNTFF---------------AGTPNXAAYVAAKGGVIGFTRA 166
Query: 183 LARRLKEDGVDITANSVHPGAIATNIIR---HNSLF 215
           LA  L +   +ITAN+V PG I ++ ++   HN  F
Sbjct: 167 LATELGK--YNITANAVTPGLIESDGVKASPHNEAF 200

>pdb|3Q6I|A Chain A, Crystal Structure Of Fabg4 And Coenzyme Binary Complex Length = 446

Iteration: 1
 Score = 41.6 bits (96), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 63/228 (27%), Positives = 96/228 (42%), Gaps = 35/228 (15%)
Query: 4   VITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSL 63
           ++TGA  GIG   A V A  G HVV  +   +A +++ ET  K        A+ LD+++ 
Sbjct: 209 IVTGAARGIGATIAEVFARDGAHVVA-IDVESAAENLAETASK----VGGTALWLDVTAD 263
Query: 64  ASVRNFASEYNIQHH--QLNILINNAGIMGTPFMLSKDNIELQFAXXXXXXXXXXXXXXD 121
            +V    SE+   HH  + +IL+NNAGI     + + D+                     
Sbjct: 264 DAVDKI-SEHLRDHHGGKADILVNNAGITRDKLLANMDDARWDAVLAVNLLA-------- 314
Query: 122 TMKKTARKSGGEGRIINVS-SEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANILHA 180
            ++ T      EG + N S  EG R+     I    I   +G  G   Y+ +K   I   
Sbjct: 315 PLRLT------EGLVGNGSIGEGGRV-----IGLSSIAGIAGNRGQTNYATTKAGMIGIT 363
Query: 181 NELARRLKEDGVDITANSVHPGAIATNI-----IRHNSLFRSMNTILH 223
             LA  L   G  IT N+V PG I T +     +    + R +N++L 
Sbjct: 364 QALAPGLAAKG--ITINAVAPGFIETQMTAAIPLATREVGRRLNSLLQ 409

>pdb|3LF1|A Chain A, Apo Structure Of The Short Chain Oxidoreductase Q9hya2 From Pseudomonas Aeruginosa Pao1 Containing An Atypical Catalytic Center Length = 265

Iteration: 1
 Score = 41.6 bits (96), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 27/85 (31%), Positives = 39/85 (45%)
Query: 4  VITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSL 63
          V+TG +SGIG  T  +L   G  V    RD    +  +  + +  P A++ A   D+   
Sbjct: 12 VVTGGSSGIGLATVELLLEAGAAVAFCARDGERLRAAESALRQRFPGARLFASVCDVLDA 71
Query: 64 ASVRNFASEYNIQHHQLNILINNAG 88
            VR FA          +IL+NNAG
Sbjct: 72 LQVRAFAEACERTLGCASILVNNAG 96

>pdb|3TZH|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase (Fabg)(F187a) From Vibrio Cholerae Length = 251

Iteration: 1
 Score = 41.6 bits (96), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 55/220 (25%), Positives = 86/220 (39%), Gaps = 51/220 (23%)
Query: 4   VITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVD---AMELDL 60
           ++TGA+ GIG   A +LA RG  V+        G    E+  + I     D    M L++
Sbjct: 16  LVTGASRGIGKAIAELLAERGAKVI--------GTATSESGAQAISDYLGDNGKGMALNV 67
Query: 61  SSLASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQFAXXXXXXXXXXXXXX 120
           ++  S+         +   ++IL+NNAGI       ++DN+ ++                
Sbjct: 68  TNPESIEAVLKAITDEFGGVDILVNNAGI-------TRDNLLMRMKEEEWSDIMETNLTS 120
Query: 121 ----------DTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYS 170
                       MKK       +GRIINV S               +    G  G   Y+
Sbjct: 121 IFRLSKAVLRGMMKKR------QGRIINVGS---------------VVGTMGNAGQANYA 159
Query: 171 QSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIR 210
            +K   I     +AR +   GV  T N+V PGAI T++ +
Sbjct: 160 AAKAGVIGFTKSMAREVASRGV--TVNTVAPGAIETDMTK 197

>pdb|4FW8|A Chain A, Crystal Structure Of Fabg4 Complexed With Coenzyme Nadh Length = 454

Iteration: 1
 Score = 41.6 bits (96), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 63/228 (27%), Positives = 96/228 (42%), Gaps = 35/228 (15%)
Query: 4   VITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSL 63
           ++TGA  GIG   A V A  G HVV  +   +A +++ ET  K        A+ LD+++ 
Sbjct: 217 IVTGAARGIGATIAEVFARDGAHVVA-IDVESAAENLAETASK----VGGTALWLDVTAD 271
Query: 64  ASVRNFASEYNIQHH--QLNILINNAGIMGTPFMLSKDNIELQFAXXXXXXXXXXXXXXD 121
            +V    SE+   HH  + +IL+NNAGI     + + D+                     
Sbjct: 272 DAVDKI-SEHLRDHHGGKADILVNNAGITRDKLLANMDDARWDAVLAVNLLA-------- 322
Query: 122 TMKKTARKSGGEGRIINVS-SEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANILHA 180
            ++ T      EG + N S  EG R+     I    I   +G  G   Y+ +K   I   
Sbjct: 323 PLRLT------EGLVGNGSIGEGGRV-----IGLSSIAGIAGNRGQTNYATTKAGMIGIT 371
Query: 181 NELARRLKEDGVDITANSVHPGAIATNI-----IRHNSLFRSMNTILH 223
             LA  L   G  IT N+V PG I T +     +    + R +N++L 
Sbjct: 372 QALAPGLAAKG--ITINAVAPGFIETQMTAAIPLATREVGRRLNSLLQ 417

>pdb|3LLS|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase From Mycobacterium Tuberculosis Length = 475

Iteration: 1
 Score = 41.6 bits (96), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 63/228 (27%), Positives = 96/228 (42%), Gaps = 35/228 (15%)
Query: 4   VITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSL 63
           ++TGA  GIG   A V A  G HVV  +   +A +++ ET  K        A+ LD+++ 
Sbjct: 238 IVTGAARGIGATIAEVFARDGAHVVA-IDVESAAENLAETASK----VGGTALWLDVTAD 292
Query: 64  ASVRNFASEYNIQHH--QLNILINNAGIMGTPFMLSKDNIELQFAXXXXXXXXXXXXXXD 121
            +V    SE+   HH  + +IL+NNAGI     + + D+                     
Sbjct: 293 DAVDKI-SEHLRDHHGGKADILVNNAGITRDKLLANMDDARWDAVLAVNLLA-------- 343
Query: 122 TMKKTARKSGGEGRIINVS-SEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANILHA 180
            ++ T      EG + N S  EG R+     I    I   +G  G   Y+ +K   I   
Sbjct: 344 PLRLT------EGLVGNGSIGEGGRV-----IGLSSIAGIAGNRGQTNYATTKAGMIGIT 392
Query: 181 NELARRLKEDGVDITANSVHPGAIATNI-----IRHNSLFRSMNTILH 223
             LA  L   G  IT N+V PG I T +     +    + R +N++L 
Sbjct: 393 QALAPGLAAKG--ITINAVAPGFIETQMTAAIPLATREVGRRLNSLLQ 438

>pdb|3V1T|C Chain C, Crystal Structure Of A Putative Ketoacyl Reductase (Fabg4) From Mycobacterium Tuberculosis H37rv At 1.9 Angstrom Resolution Length = 462

Iteration: 1
 Score = 41.6 bits (96), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 63/228 (27%), Positives = 96/228 (42%), Gaps = 35/228 (15%)
Query: 4   VITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSL 63
           ++TGA  GIG   A V A  G HVV  +   +A +++ ET  K        A+ LD+++ 
Sbjct: 225 IVTGAARGIGATIAEVFARDGAHVVA-IDVESAAENLAETASK----VGGTALWLDVTAD 279
Query: 64  ASVRNFASEYNIQHH--QLNILINNAGIMGTPFMLSKDNIELQFAXXXXXXXXXXXXXXD 121
            +V    SE+   HH  + +IL+NNAGI     + + D+                     
Sbjct: 280 DAVDKI-SEHLRDHHGGKADILVNNAGITRDKLLANMDDARWDAVLAVNLLA-------- 330
Query: 122 TMKKTARKSGGEGRIINVS-SEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANILHA 180
            ++ T      EG + N S  EG R+     I    I   +G  G   Y+ +K   I   
Sbjct: 331 PLRLT------EGLVGNGSIGEGGRV-----IGLSSIAGIAGNRGQTNYATTKAGMIGIT 379
Query: 181 NELARRLKEDGVDITANSVHPGAIATNI-----IRHNSLFRSMNTILH 223
             LA  L   G  IT N+V PG I T +     +    + R +N++L 
Sbjct: 380 QALAPGLAAKG--ITINAVAPGFIETQMTAAIPLATREVGRRLNSLLQ 425

>pdb|3M1L|A Chain A, Crystal Strucutre Of A C-Terminal Trunacted Mutant Of A Putative Ketoacyl Reductase (Fabg4) From Mycobacterium Tuberculosis H37rv At 2.5 Angstrom Resolution Length = 432

Iteration: 1
 Score = 41.6 bits (96), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 63/228 (27%), Positives = 96/228 (42%), Gaps = 35/228 (15%)
Query: 4   VITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSL 63
           ++TGA  GIG   A V A  G HVV  +   +A +++ ET  K        A+ LD+++ 
Sbjct: 201 IVTGAARGIGATIAEVFARDGAHVVA-IDVESAAENLAETASK----VGGTALWLDVTAD 255
Query: 64  ASVRNFASEYNIQHH--QLNILINNAGIMGTPFMLSKDNIELQFAXXXXXXXXXXXXXXD 121
            +V    SE+   HH  + +IL+NNAGI     + + D+                     
Sbjct: 256 DAVDKI-SEHLRDHHGGKADILVNNAGITRDKLLANMDDARWDAVLAVNLLA-------- 306
Query: 122 TMKKTARKSGGEGRIINVS-SEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANILHA 180
            ++ T      EG + N S  EG R+     I    I   +G  G   Y+ +K   I   
Sbjct: 307 PLRLT------EGLVGNGSIGEGGRV-----IGLSSIAGIAGNRGQTNYATTKAGMIGIT 355
Query: 181 NELARRLKEDGVDITANSVHPGAIATNI-----IRHNSLFRSMNTILH 223
             LA  L   G  IT N+V PG I T +     +    + R +N++L 
Sbjct: 356 QALAPGLAAKG--ITINAVAPGFIETQMTAAIPLATREVGRRLNSLLQ 401

>pdb|3L77|A Chain A, X-Ray Structure Alcohol Dehydrogenase From Archaeon Thermococcus Sibiricus Complexed With 5-Hydroxy-Nadp Length = 235

Iteration: 1
 Score = 41.2 bits (95), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 26/86 (30%), Positives = 46/86 (53%), Gaps = 1/86 (1%)
Query: 4  VITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSL 63
          VITGA+ GIG   AR LA  G  + +G R +   + +   +++E    +V    LD+S  
Sbjct: 6  VITGASRGIGEAIARALARDGYALALGARSVDRLEKIAHELMQE-QGVEVFYHHLDVSKA 64
Query: 64 ASVRNFASEYNIQHHQLNILINNAGI 89
           SV  F+ +   +   +++++ NAG+
Sbjct: 65 ESVEEFSKKVLERFGDVDVVVANAGL 90

>pdb|1I01|A Chain A, Crystal Structure Of Beta-Ketoacyl [acyl Carrier Protein] Reductase From E. Coli. Length = 244

Iteration: 1
 Score = 41.2 bits (95), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 53/216 (24%), Positives = 85/216 (39%), Gaps = 43/216 (19%)
Query: 4   VITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIP---SAKVDAMELDL 60
           ++TGA+ GIG   A  LA RG  V+        G    E   + I     A    + L++
Sbjct: 9   LVTGASRGIGRAIAETLAARGAKVI--------GTATSENGAQAISDYLGANGKGLMLNV 60
Query: 61  SSLASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQFAXX------XXXXXX 114
           +  AS+ +   +   +  +++IL+NNAGI       ++DN+ ++                
Sbjct: 61  TDPASIESVLEKIRAEFGEVDILVNNAGI-------TRDNLLMRMKDEEWNDIIETNLSS 113
Query: 115 XXXXXXDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKL 174
                   M+   +K    GRII + S               +    G  G   Y+ +K 
Sbjct: 114 VFRLSKAVMRAMMKKR--HGRIITIGS---------------VVGTMGNGGQANYAAAKA 156
Query: 175 ANILHANELARRLKEDGVDITANSVHPGAIATNIIR 210
             I  +  LAR +   G  IT N V PG I T++ R
Sbjct: 157 GLIGFSKSLAREVASRG--ITVNVVAPGFIETDMTR 190

>pdb|3TN7|A Chain A, Crystal Structure Of Short-Chain Alcohol Dehydrogenase From Hyperthermophilic Archaeon Thermococcus Sibiricus Complexed With 5- Hydroxy-Nadp Length = 257

Iteration: 1
 Score = 41.2 bits (95), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 26/86 (30%), Positives = 46/86 (53%), Gaps = 1/86 (1%)
Query: 4   VITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSL 63
           VITGA+ GIG   AR LA  G  + +G R +   + +   +++E    +V    LD+S  
Sbjct: 28  VITGASRGIGEAIARALARDGYALALGARSVDRLEKIAHELMQE-QGVEVFYHHLDVSKA 86
Query: 64  ASVRNFASEYNIQHHQLNILINNAGI 89
            SV  F+ +   +   +++++ NAG+
Sbjct: 87  ESVEEFSKKVLERFGDVDVVVANAGL 112

>pdb|3M1A|A Chain A, The Crystal Structure Of A Short-Chain Dehydrogenase From Streptomyces Avermitilis To 2a Length = 281

Iteration: 1
 Score = 40.4 bits (93), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 51/221 (23%), Positives = 91/221 (41%), Gaps = 25/221 (11%)
Query: 4   VITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSL 63
           ++TGA+SG G   A      G  V+   R   A  D    +V   P  + +A+ LD++  
Sbjct: 9   LVTGASSGFGRAIAEAAVAAGDTVIGTARRTEALDD----LVAAYPD-RAEAISLDVTDG 63
Query: 64  ASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQFAXXXXXXXXXXXXXXDTM 123
             +   A++   ++ ++++L+NNAG   T     ++  E +                  +
Sbjct: 64  ERIDVVAADVLARYGRVDVLVNNAGR--TQVGAFEETTERELRDLFELHVFGPARLTRAL 121
Query: 124 KKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANILHANEL 183
               R+  G G ++N+SS G +L++                GF AYS +K A    +  L
Sbjct: 122 LPQXRER-GSGSVVNISSFGGQLSFA---------------GFSAYSATKAALEQLSEGL 165
Query: 184 ARRLKEDGVDITANSVHPGAIATNIIRHNSLFRSMNTILHA 224
           A  +   G+ +    V PGA  TN+    + + S     +A
Sbjct: 166 ADEVAPFGIKVLI--VEPGAFRTNLFGKGAAYFSEENPAYA 204

>pdb|2PNF|A Chain A, Structure Of Aquifex Aeolicus Fabg 3-oxoacyl-(acyl-carrier Protein) Reductase Length = 248

Iteration: 1
 Score = 40.4 bits (93), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 53/206 (25%), Positives = 88/206 (42%), Gaps = 23/206 (11%)
Query: 4   VITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSL 63
           ++TG+T GIG   A  LA  G  V++        K V E I  +    K   +E++L S 
Sbjct: 11  LVTGSTRGIGRAIAEKLASAGSTVIITGTSGERAKAVAEEIANKY-GVKAHGVEMNLLSE 69
Query: 64  ASV-RNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQFAXXXXXXXXXXXXXXDT 122
            S+ + F   YN+    ++IL+NNAGI      L    ++ +                ++
Sbjct: 70  ESINKAFEEIYNLVDG-IDILVNNAGITRDKLFLRMSLLDWE-EVLKVNLTGTFLVTQNS 127
Query: 123 MKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANILHANE 182
           ++K  ++    GRI+N+SS               +   +G  G   YS +K   I     
Sbjct: 128 LRKMIKQRW--GRIVNISS---------------VVGFTGNVGQVNYSTTKAGLIGFTKS 170
Query: 183 LARRLKEDGVDITANSVHPGAIATNI 208
           LA+ L     ++  N+V PG I T++
Sbjct: 171 LAKELAPR--NVLVNAVAPGFIETDM 194

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	251
3rd5_A	291	Mypaa.01249.C; ssgcid, structural genomics, seattl	1e-106
1wma_A	276	Carbonyl reductase [NADPH] 1; oxidoreductase; HET:	9e-74
3o26_A	311	Salutaridine reductase; short chain dehydrogenase/	3e-56
1yo6_A	250	Putative carbonyl reductase sniffer; tyrosine-depe	1e-33
1yb1_A	272	17-beta-hydroxysteroid dehydrogenase type XI; shor	7e-33
3l6e_A	235	Oxidoreductase, short-chain dehydrogenase/reducta;	3e-31
3nyw_A	250	Putative oxidoreductase; fatty acid synthesis,3-ox	5e-31
1spx_A	278	Short-chain reductase family member (5L265); paral	1e-30
1oaa_A	259	Sepiapterin reductase; tetrahydrobiopterin, oxidor	2e-30
3ioy_A	319	Short-chain dehydrogenase/reductase SDR; structura	2e-30
1xu9_A	286	Corticosteroid 11-beta-dehydrogenase, isozyme 1; h	3e-30
1sny_A	267	Sniffer CG10964-PA; alpha and beta protein, rossma	7e-30
3ai3_A	263	NADPH-sorbose reductase; rossmann-fold, NADPH-depe	9e-30
3t4x_A	267	Oxidoreductase, short chain dehydrogenase/reducta;	1e-29
3tjr_A	301	Short chain dehydrogenase; structural genomics, se	2e-29
3l77_A	235	Short-chain alcohol dehydrogenase; oxidoreductase;	3e-29
2z1n_A	260	Dehydrogenase; reductase, SDR, oxidoreductase; 1.8	4e-29
1xkq_A	280	Short-chain reductase family member (5D234); parra	1e-28
3kzv_A	254	Uncharacterized oxidoreductase YIR035C; cytoplasmi	1e-28
1xhl_A	297	Short-chain dehydrogenase/reductase family member	2e-28
3f1l_A	252	Uncharacterized oxidoreductase YCIK; E. coli, NADP	5e-28
3lf2_A	265	Short chain oxidoreductase Q9HYA2; SDR, SCOR, ross	8e-28
1nff_A	260	Putative oxidoreductase RV2002; directed evolution	9e-28
3i1j_A	247	Oxidoreductase, short chain dehydrogenase/reducta;	1e-27
4eso_A	255	Putative oxidoreductase; NADP, structural genomics	1e-27
2yut_A	207	Putative short-chain oxidoreductase; alpha and bet	1e-27
1hdc_A	254	3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxi	1e-27
1yde_A	270	Retinal dehydrogenase/reductase 3; oxidoreductase,	2e-27
1hxh_A	253	3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-b	2e-27
1zk4_A	251	R-specific alcohol dehydrogenase; short chain redu	2e-27
2gdz_A	267	NAD+-dependent 15-hydroxyprostaglandin dehydrogen;	3e-27
3h7a_A	252	Short chain dehydrogenase; oxidoreductase, PSI-2,	4e-27
4fgs_A	273	Probable dehydrogenase protein; PSI-biology, nysgr	4e-27
1iy8_A	267	Levodione reductase; oxidoreductase; HET: NAD; 1.6	5e-27
1sby_A	254	Alcohol dehydrogenase; ternary complex, NAD, trifl	6e-27
3tfo_A	264	Putative 3-oxoacyl-(acyl-carrier-protein) reducta;	6e-27
4egf_A	266	L-xylulose reductase; structural genomics, ssgcid,	1e-26
3ucx_A	264	Short chain dehydrogenase; ssgcid, seattle structu	1e-26
4fn4_A	254	Short chain dehydrogenase; NADH-binding, rossmann	2e-26
3n74_A	261	3-ketoacyl-(acyl-carrier-protein) reductase; seatt	2e-26
3e9n_A	245	Putative short-chain dehydrogenase/reductase; stru	2e-26
1jtv_A	327	17 beta-hydroxysteroid dehydrogenase type 1; stero	3e-26
3guy_A	230	Short-chain dehydrogenase/reductase SDR; structura	5e-26
1fmc_A	255	7 alpha-hydroxysteroid dehydrogenase; short-chain	5e-26
3rkr_A	262	Short chain oxidoreductase; rossmann fold; HET: NA	7e-26
1xg5_A	279	ARPG836; short chain dehydrogenase, human, SGC, st	8e-26
3v8b_A	283	Putative dehydrogenase, possibly 3-oxoacyl-[acyl-	1e-25
2cfc_A	250	2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidor	1e-25
1gee_A	261	Glucose 1-dehydrogenase; short-chain dehydrogenase	1e-25
3tox_A	280	Short chain dehydrogenase; structural genomics, PS	2e-25
2ehd_A	234	Oxidoreductase, oxidoreductase, short-chain dehydr	2e-25
2bd0_A	244	Sepiapterin reductase; oxidoreductase; HET: NAP BI	2e-25
3zv4_A	281	CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; ox	3e-25
3gaf_A	256	7-alpha-hydroxysteroid dehydrogenase; seattle stru	5e-25
4e6p_A	259	Probable sorbitol dehydrogenase (L-iditol 2-dehyd;	5e-25
3asu_A	248	Short-chain dehydrogenase/reductase SDR; SDR famil	5e-25
4dyv_A	272	Short-chain dehydrogenase/reductase SDR; structura	7e-25
3u9l_A	324	3-oxoacyl-[acyl-carrier-protein] reductase; struct	7e-25
2zat_A	260	Dehydrogenase/reductase SDR family member 4; alpha	8e-25
4e4y_A	244	Short chain dehydrogenase family protein; structur	8e-25
4dqx_A	277	Probable oxidoreductase protein; structural genomi	9e-25
3rku_A	287	Oxidoreductase YMR226C; substrate fingerprint, sho	9e-25
3a28_C	258	L-2.3-butanediol dehydrogenase; chiral substrate r	1e-24
2ag5_A	246	DHRS6, dehydrogenase/reductase (SDR family) member	1e-24
3svt_A	281	Short-chain type dehydrogenase/reductase; ssgcid,	1e-24
2b4q_A	276	Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier	1e-24
2jah_A	247	Clavulanic acid dehydrogenase; short-chain dehydro	2e-24
1geg_A	256	Acetoin reductase; SDR family, oxidoreductase; HET	2e-24
3afn_B	258	Carbonyl reductase; alpha/beta/alpha, rossmann-fol	3e-24
3tzq_B	271	Short-chain type dehydrogenase/reductase; ssgcid,	3e-24
3d3w_A	244	L-xylulose reductase; uronate cycle, short-chain d	4e-24
3icc_A	255	Putative 3-oxoacyl-(acyl carrier protein) reducta;	4e-24
1cyd_A	244	Carbonyl reductase; short-chain dehydrogenase, oxi	5e-24
3orf_A	251	Dihydropteridine reductase; alpha-beta-alpha sandw	6e-24
1zem_A	262	Xylitol dehydrogenase; rossmann fold, dinucleotide	7e-24
3vtz_A	269	Glucose 1-dehydrogenase; rossmann fold, oxidoreduc	7e-24
3gvc_A	277	Oxidoreductase, probable short-chain type dehydrog	7e-24
2d1y_A	256	Hypothetical protein TT0321; strucrtural genomics,	8e-24
2nwq_A	272	Probable short-chain dehydrogenase; oxidoreductase	1e-23
3sc4_A	285	Short chain dehydrogenase (A0QTM2 homolog); ssgcid	1e-23
3v2h_A	281	D-beta-hydroxybutyrate dehydrogenase; structural g	1e-23
3u5t_A	267	3-oxoacyl-[acyl-carrier-protein] reductase; struct	2e-23
4dry_A	281	3-oxoacyl-[acyl-carrier-protein] reductase; struct	2e-23
3gem_A	260	Short chain dehydrogenase; structural genomics, AP	2e-23
3v2g_A	271	3-oxoacyl-[acyl-carrier-protein] reductase; struct	2e-23
2dtx_A	264	Glucose 1-dehydrogenase related protein; rossmann	2e-23
2bgk_A	278	Rhizome secoisolariciresinol dehydrogenase; oxidor	3e-23
2qq5_A	260	DHRS1, dehydrogenase/reductase SDR family member 1	3e-23
4e3z_A	272	Putative oxidoreductase protein; PSI-biology, stru	3e-23
3kvo_A	346	Hydroxysteroid dehydrogenase-like protein 2; HSDL2	4e-23
3e03_A	274	Short chain dehydrogenase; structural genomics, PS	5e-23
1fjh_A	257	3alpha-hydroxysteroid dehydrogenase/carbonyl reduc	6e-23
1ae1_A	273	Tropinone reductase-I; oxidoreductase, tropane alk	7e-23
3awd_A	260	GOX2181, putative polyol dehydrogenase; oxidoreduc	8e-23
1ja9_A	274	4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; p	1e-22
3oid_A	258	Enoyl-[acyl-carrier-protein] reductase [NADPH]; fa	1e-22
2ew8_A	249	(S)-1-phenylethanol dehydrogenase; transferase; 2.	1e-22
3qiv_A	253	Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR	1e-22
1x1t_A	260	D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, S	1e-22
3pxx_A	287	Carveol dehydrogenase; structural genomics, seattl	1e-22
3is3_A	270	17BETA-hydroxysteroid dehydrogenase; short chain d	2e-22
3ksu_A	262	3-oxoacyl-acyl carrier protein reductase; structur	2e-22
3ak4_A	263	NADH-dependent quinuclidinone reductase; SDR, (R)-	3e-22
2q2v_A	255	Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidore	4e-22
3uxy_A	266	Short-chain dehydrogenase/reductase SDR; structura	4e-22
3m1a_A	281	Putative dehydrogenase; short, PSI, MCSG, structur	4e-22
1g0o_A	283	Trihydroxynaphthalene reductase; protein-NADPH-act	6e-22
3edm_A	259	Short chain dehydrogenase; structural genomics, ox	6e-22
1mxh_A	276	Pteridine reductase 2; SDR topology, protein-subst	9e-22
4da9_A	280	Short-chain dehydrogenase/reductase; structural ge	9e-22
3t7c_A	299	Carveol dehydrogenase; structural genomics, seattl	1e-21
3sju_A	279	Keto reductase; short-chain dehydrogenase, oxidore	2e-21
4g81_D	255	Putative hexonate dehydrogenase; enzyme function i	2e-21
2ae2_A	260	Protein (tropinone reductase-II); oxidoreductase,	3e-21
3o38_A	266	Short chain dehydrogenase; tuberculosis, ortholog	3e-21
1dhr_A	241	Dihydropteridine reductase; oxidoreductase(acting	3e-21
3pk0_A	262	Short-chain dehydrogenase/reductase SDR; ssgcid, s	3e-21
1yxm_A	303	Pecra, peroxisomal trans 2-enoyl COA reductase; pe	4e-21
3p19_A	266	BFPVVD8, putative blue fluorescent protein; rossma	5e-21
1xq1_A	266	Putative tropinone reducatse; structural genomics,	5e-21
2rhc_B	277	Actinorhodin polyketide ketoreductase; oxidoreduct	6e-21
3r1i_A	276	Short-chain type dehydrogenase/reductase; structur	6e-21
1ooe_A	236	Dihydropteridine reductase; structural genomics, P	9e-21
3tsc_A	277	Putative oxidoreductase; structural genomics, seat	9e-21
1h5q_A	265	NADP-dependent mannitol dehydrogenase; oxidoreduct	1e-20
1zmo_A	244	Halohydrin dehalogenase; haloalcohol dehalogenase,	1e-20
3un1_A	260	Probable oxidoreductase; structural genomics, PSI-	1e-20
3pgx_A	280	Carveol dehydrogenase; structural genomics, seattl	2e-20
3rih_A	293	Short chain dehydrogenase or reductase; structural	2e-20
3uve_A	286	Carveol dehydrogenase ((+)-trans-carveol dehydrog;	2e-20
2wsb_A	254	Galactitol dehydrogenase; oxidoreductase, SDR, ros	2e-20
3sx2_A	278	Putative 3-ketoacyl-(acyl-carrier-protein) reduct;	3e-20
3imf_A	257	Short chain dehydrogenase; structural genomics, in	3e-20
3ppi_A	281	3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, de	4e-20
1vl8_A	267	Gluconate 5-dehydrogenase; TM0441, structural geno	6e-20
3tpc_A	257	Short chain alcohol dehydrogenase-related dehydro;	6e-20
4fc7_A	277	Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossman	1e-19
3dii_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	1e-19
2x9g_A	288	PTR1, pteridine reductase; short chain dehydrogena	2e-19
3d7l_A	202	LIN1944 protein; APC89317, structural genomics, PS	2e-19
2fwm_X	250	2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; e	2e-19
2a4k_A	263	3-oxoacyl-[acyl carrier protein] reductase; reduct	3e-19
1o5i_A	249	3-oxoacyl-(acyl carrier protein) reductase; TM1169	4e-19
2o23_A	265	HADH2 protein; HSD17B10, schad, ERAB, type II HADH	4e-19
1w6u_A	302	2,4-dienoyl-COA reductase, mitochondrial precursor	5e-19
3r3s_A	294	Oxidoreductase; structural genomics, csgid, center	6e-19
3oec_A	317	Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO;	6e-19
1zmt_A	254	Haloalcohol dehalogenase HHEC; halohydrin dehaloge	6e-19
3ezl_A	256	Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA	7e-19
2dkn_A	255	3-alpha-hydroxysteroid dehydrogenase; oxidoreducta	1e-18
3rwb_A	247	TPLDH, pyridoxal 4-dehydrogenase; short chain dehy	2e-18
3gk3_A	269	Acetoacetyl-COA reductase; acetoacetyl-CO reductas	2e-18
2pd6_A	264	Estradiol 17-beta-dehydrogenase 8; short-chain deh	4e-18
3cxt_A	291	Dehydrogenase with different specificities; rossma	4e-18
3ctm_A	279	Carbonyl reductase; alcohol dehydrogenase, short-c	5e-18
3u0b_A	454	Oxidoreductase, short chain dehydrogenase/reducta	8e-18
3s55_A	281	Putative short-chain dehydrogenase/reductase; stru	1e-17
1e7w_A	291	Pteridine reductase; dihydrofolate reductase, shor	1e-17
2uvd_A	246	3-oxoacyl-(acyl-carrier-protein) reductase; beta-k	2e-17
3uf0_A	273	Short-chain dehydrogenase/reductase SDR; gluconate	2e-17
3gdg_A	267	Probable NADP-dependent mannitol dehydrogenase; ro	2e-17
3osu_A	246	3-oxoacyl-[acyl-carrier-protein] reductase; struct	2e-17
1edo_A	244	Beta-keto acyl carrier protein reductase; nucleoti	3e-17
1uay_A	242	Type II 3-hydroxyacyl-COA dehydrogenase; beta oxid	3e-17
3lyl_A	247	3-oxoacyl-(acyl-carrier-protein) reductase; alpha	3e-17
2hq1_A	247	Glucose/ribitol dehydrogenase; CTH-1438, structura	4e-17
3tl3_A	257	Short-chain type dehydrogenase/reductase; ssgcid,	4e-17
4dmm_A	269	3-oxoacyl-[acyl-carrier-protein] reductase; rossma	4e-17
3ftp_A	270	3-oxoacyl-[acyl-carrier protein] reductase; ssgcid	6e-17
2c07_A	285	3-oxoacyl-(acyl-carrier protein) reductase; oxidor	7e-17
1uls_A	245	Putative 3-oxoacyl-acyl carrier protein reductase;	8e-17
3op4_A	248	3-oxoacyl-[acyl-carrier protein] reductase; 3-keto	9e-17
2ph3_A	245	3-oxoacyl-[acyl carrier protein] reductase; TTHA04	9e-17
3i4f_A	264	3-oxoacyl-[acyl-carrier protein] reductase; struct	1e-16
2qhx_A	328	Pteridine reductase 1; oxidoreductase, short-chain	1e-16
3ijr_A	291	Oxidoreductase, short chain dehydrogenase/reducta;	1e-16
2pnf_A	248	3-oxoacyl-[acyl-carrier-protein] reductase; short	1e-16
3grp_A	266	3-oxoacyl-(acyl carrierprotein) reductase; structu	3e-16
3f9i_A	249	3-oxoacyl-[acyl-carrier-protein] reductase; 3-keto	3e-16
2ekp_A	239	2-deoxy-D-gluconate 3-dehydrogenase; structural ge	4e-16
2nm0_A	253	Probable 3-oxacyl-(acyl-carrier-protein) reductas;	1e-14
1uzm_A	247	3-oxoacyl-[acyl-carrier protein] reductase; beta-k	1e-14
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	1e-14
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	3e-11
3oml_A	613	GH14720P, peroxisomal multifunctional enzyme type	1e-13
1gz6_A	319	Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MF	2e-13
3qlj_A	322	Short chain dehydrogenase; structural genomics, se	1e-12
1lu9_A	287	Methylene tetrahydromethanopterin dehydrogenase; a	4e-08
2x4g_A	342	Nucleoside-diphosphate-sugar epimerase; isomerase;	1e-07
2hrz_A	342	AGR_C_4963P, nucleoside-diphosphate-sugar epimeras	7e-06
3dhn_A	227	NAD-dependent epimerase/dehydratase; reductase, PF	2e-05
3e8x_A	236	Putative NAD-dependent epimerase/dehydratase; stru	4e-05
1hdo_A	206	Biliverdin IX beta reductase; foetal metabolism, H	6e-05
3e48_A	289	Putative nucleoside-diphosphate-sugar epimerase; a	1e-04
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	1e-04
3h2s_A	224	Putative NADH-flavin reductase; Q03B84, NESG, LCR1	1e-04
2jl1_A	287	Triphenylmethane reductase; oxidoreductase, biorem	3e-04
3qvo_A	236	NMRA family protein; structural genomics, PSI-biol	4e-04
3dqp_A	219	Oxidoreductase YLBE; alpha-beta protein., structur	5e-04

>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis} Length = 291

 Score =  308 bits (791), Expect = e-106
 Identities = 93/238 (39%), Positives = 124/238 (52%), Gaps = 27/238 (11%)

Query: 3   IVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSS 62
           +VITGA SG+G  TAR LA RG  V+M VRD   G+    T+     + +V+  ELDL  
Sbjct: 19  VVITGANSGLGAVTARELARRGATVIMAVRDTRKGEAAARTM-----AGQVEVRELDLQD 73

Query: 63  LASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDT 122
           L+SVR FA   +      ++LINNAGIM  P+ L+ D  E Q  TNHLGHF LTNLLL  
Sbjct: 74  LSSVRRFADGVS----GADVLINNAGIMAVPYALTVDGFESQIGTNHLGHFALTNLLLPR 129

Query: 123 MKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPS-GYNGFRAYSQSKLANILHAN 181
           +           R++ VSS  H       I  + +N  S  Y+ + AYSQSKLAN+L  +
Sbjct: 130 LT---------DRVVTVSSMAHWPG---RINLEDLNWRSRRYSPWLAYSQSKLANLLFTS 177

Query: 182 ELARRLKEDGVDITANSVHPGAIATNIIRHNSLFRSMNTILHALPGIAGKCLLKNVQQ 239
           EL RRL   G  + A + HPG   TN+   +        +  AL   A + +  +   
Sbjct: 178 ELQRRLTAAGSPLRALAAHPGYSHTNLQGASG-----RKLGDALMSAATRVVATDADF 230

>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A* Length = 276

 Score =  224 bits (574), Expect = 9e-74
 Identities = 55/242 (22%), Positives = 89/242 (36%), Gaps = 40/242 (16%)

Query: 3   IVITGATSGIGTETARVLA-LRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLS 61
            ++TG   GIG    R L  L    VV+  RD+  G+   + +  E         +LD+ 
Sbjct: 7   ALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAE--GLSPRFHQLDID 64

Query: 62  SLASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSK--DNIELQFATNHLGHFLLTNLL 119
            L S+R        ++  L++L+NNAGI       +      E+   TN  G   +   L
Sbjct: 65  DLQSIRALRDFLRKEYGGLDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTEL 124

Query: 120 LDTMKKTARKSGGEGRIINVSSEGHRLAYH-------EGIRFDKIND------------- 159
           L  +K         GR++NVSS     A         +  R + I +             
Sbjct: 125 LPLIKPQ-------GRVVNVSSIMSVRALKSCSPELQQKFRSETITEEELVGLMNKFVED 177

Query: 160 ------PSGYNGFRAYSQSKLANILHANELARRLKED--GVDITANSVHPGAIATNIIRH 211
                         AY  +K+   + +   AR+L E   G  I  N+  PG + T++   
Sbjct: 178 TKKGVHQKEGWPSSAYGVTKIGVTVLSRIHARKLSEQRKGDKILLNACCPGWVRTDMAGP 237

Query: 212 NS 213
            +
Sbjct: 238 KA 239

>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} Length = 311

 Score =  181 bits (460), Expect = 3e-56
 Identities = 53/271 (19%), Positives = 91/271 (33%), Gaps = 71/271 (26%)

Query: 3   IVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSS 62
            V+TG   GIG E  + L+  G+ VV+  RD+  G +  E + K      V   +LD++ 
Sbjct: 15  AVVTGGNKGIGFEICKQLSSNGIMVVLTCRDVTKGHEAVEKL-KNSNHENVVFHQLDVTD 73

Query: 63  -LASVRNFASEYNIQHHQLNILINNAGIMGTPF--------------------------- 94
            +A++ + A        +L+IL+NNAG+ G                              
Sbjct: 74  PIATMSSLADFIKTHFGKLDILVNNAGVAGFSVDADRFKAMISDIGEDSEELVKIYEKPE 133

Query: 95  -----MLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLA-- 147
                  + +  E     N+ G   +T +L+  ++          RI+NVSS    L   
Sbjct: 134 AQELMSETYELAEECLKINYNGVKSVTEVLIPLLQL-----SDSPRIVNVSSSTGSLKYV 188

Query: 148 --------------------------YHEGIRFDKINDPSGYNGFRAYSQSKLANILHAN 181
                                       +  + + I      +   AY+ SK     +  
Sbjct: 189 SNETALEILGDGDALTEERIDMVVNMLLKDFKENLIETNGWPSFGAAYTTSKACLNAYTR 248

Query: 182 ELARRLKEDGVDITANSVHPGAIATNIIRHN 212
            LA ++         N V PG + T +    
Sbjct: 249 VLANKIP----KFQVNCVCPGLVKTEMNYGI 275

>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 250

 Score =  121 bits (305), Expect = 1e-33
 Identities = 59/224 (26%), Positives = 92/224 (41%), Gaps = 30/224 (13%)

Query: 3   IVITGATSGIGTETARVLALRG--VHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDL 60
           +V+TGA  GIG    + L       H++   RD+    +     +K I  ++V  + L +
Sbjct: 6   VVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATE-----LKSIKDSRVHVLPLTV 60

Query: 61  SSLASVRNFASEYNIQH--HQLNILINNAGIM---GTPFMLSKDNIELQFATNHLGHFLL 115
           +   S+  F S+         L++LINNAG++   GT    ++  I  Q   N     LL
Sbjct: 61  TCDKSLDTFVSKVGEIVGSDGLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVLL 120

Query: 116 TNLLLDTMKKTARKSGGE------GRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAY 169
           T  LL  +K  A K  G+        +I +SS    +  +           S      AY
Sbjct: 121 TQKLLPLLKNAASKESGDQLSVSRAAVITISSGLGSITDNTS--------GSAQFPVLAY 172

Query: 170 SQSKLA-NILHANELARRLKEDGVDITANSVHPGAIATNIIRHN 212
             SK A N+     LA  LK+D   +   +  PG + TN+   N
Sbjct: 173 RMSKAAINMF-GRTLAVDLKDDN--VLVVNFCPGWVQTNLGGKN 213

>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2 Length = 272

 Score =  119 bits (301), Expect = 7e-33
 Identities = 49/212 (23%), Positives = 77/212 (36%), Gaps = 25/212 (11%)

Query: 3   IVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSS 62
           ++ITGA  GIG  TA   A     +V+   +    ++           AKV    +D S+
Sbjct: 34  VLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGL--GAKVHTFVVDCSN 91

Query: 63  LASVRNFASEYNIQHHQLNILINNAGIM-GTPFM-LSKDNIELQFATNHLGHFLLTNLLL 120
              + + A +   +   ++IL+NNAG++  +         IE  F  N L HF  T   L
Sbjct: 92  REDIYSSAKKVKAEIGDVSILVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFWTTKAFL 151

Query: 121 DTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANILHA 180
             M K        G I+ V+S         G                AY  SK A +   
Sbjct: 152 PAMTKN-----NHGHIVTVASAA-------GH--------VSVPFLLAYCSSKFAAVGFH 191

Query: 181 NELARRLKEDGVD-ITANSVHPGAIATNIIRH 211
             L   L    +  +    + P  + T  I++
Sbjct: 192 KTLTDELAALQITGVKTTCLCPNFVNTGFIKN 223

>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} Length = 235

 Score =  114 bits (288), Expect = 3e-31
 Identities = 36/211 (17%), Positives = 67/211 (31%), Gaps = 30/211 (14%)

Query: 3   IVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSS 62
           I++TGA SG+G      L  RG  V M  R     +  +  +        V  +  DL+ 
Sbjct: 6   IIVTGAGSGLGRALTIGLVERGHQVSMMGRRYQRLQQQELLL-----GNAVIGIVADLAH 60

Query: 63  LASVRNFASEYNIQHHQLNILINNAGIM-GTPFM-LSKDNIELQFATNHLGHFLLTNLLL 120
              V    +          ++++ AG     P    + + I     +N +   L+    +
Sbjct: 61  HEDVDVAFAAAVEWGGLPELVLHCAGTGEFGPVGVYTAEQIRRVMESNLVSTILVAQQTV 120

Query: 121 DTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANILHA 180
             + +        G + NV S   ++               G      Y  SK       
Sbjct: 121 RLIGERG------GVLANVLSSAAQV---------------GKANESLYCASKWGMRGFL 159

Query: 181 NELARRLKEDGVDITANSVHPGAIATNIIRH 211
             L   LK+    +   +++P  I +    +
Sbjct: 160 ESLRAELKDSP--LRLVNLYPSGIRSEFWDN 188

>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron} Length = 250

 Score =  114 bits (287), Expect = 5e-31
 Identities = 46/212 (21%), Positives = 82/212 (38%), Gaps = 26/212 (12%)

Query: 3   IVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKE-IPSAKVDAMELDLS 61
            +ITGA+ GIG   A  LA  G  VV+  R     + V + I++      +   + LD++
Sbjct: 10  AIITGASQGIGAVIAAGLATDGYRVVLIARSKQNLEKVHDEIMRSNKHVQEPIVLPLDIT 69

Query: 62  SLASVRNFASEYNIQHHQLNILINNAGIM-GTPFMLSKDNIELQFATNHLGHFLLTNLLL 120
                     + + ++  ++IL+N A +          DN       N +  + +   + 
Sbjct: 70  DCTKADTEIKDIHQKYGAVDILVNAAAMFMDGSLSEPVDNFRKIMEINVIAQYGILKTVT 129

Query: 121 DTMKKTARKSGGEGRIINVSS-EGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANILH 179
           + MK   +K+   G I NV+S                     G+     Y  +K A +  
Sbjct: 130 EIMKV--QKN---GYIFNVASRAAKY----------------GFADGGIYGSTKFALLGL 168

Query: 180 ANELARRLKEDGVDITANSVHPGAIATNIIRH 211
           A  L R L   G  I   ++ PG + T++ + 
Sbjct: 169 AESLYRELAPLG--IRVTTLCPGWVNTDMAKK 198

>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 278

 Score =  113 bits (286), Expect = 1e-30
 Identities = 51/214 (23%), Positives = 86/214 (40%), Gaps = 29/214 (13%)

Query: 4   VITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKE-IPSAKVDAMELDLSS 62
           +ITG+++GIG  TA + A  G  V +  R     ++ ++ I+   +    V+++  D+++
Sbjct: 10  IITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTT 69

Query: 63  LASVRNFASEYNIQHHQLNILINNAGI------MGTPFMLSKDNIELQFATNHLGHFLLT 116
            A      S    +  +L+IL+NNAG         T    S ++ +     N      LT
Sbjct: 70  DAGQDEILSTTLGKFGKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRSVIALT 129

Query: 117 NLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLAN 176
              +  +  T       G I+N+SS         G+             F  YS +K A 
Sbjct: 130 KKAVPHLSSTK------GEIVNISS------IASGLH--------ATPDFPYYSIAKAAI 169

Query: 177 ILHANELARRLKEDGVDITANSVHPGAIATNIIR 210
             +    A  L + G  I  NS+ PG +AT    
Sbjct: 170 DQYTRNTAIDLIQHG--IRVNSISPGLVATGFGS 201

>1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A* Length = 259

 Score =  113 bits (284), Expect = 2e-30
 Identities = 48/221 (21%), Positives = 84/221 (38%), Gaps = 34/221 (15%)

Query: 3   IVITGATSGIGTETARVLA---LRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELD 59
            V+TGA+ G G   A  LA     G  +++  R  +  + +KE +  + P  KV     D
Sbjct: 9   CVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDLKVVLAAAD 68

Query: 60  LSSLASVRNFASE----YNIQHHQLNILINNAGIMGTPFMLSKDNIELQ-----FATNHL 110
           L + A V+   S        +  Q  +LINNA  +G       +  +L      +A N  
Sbjct: 69  LGTEAGVQRLLSAVRELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWALNLT 128

Query: 111 GHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYS 170
               LT+  L+  + +    G    ++N+SS          ++         Y G+  Y 
Sbjct: 129 SMLCLTSGTLNAFQDSP---GLSKTVVNISSLC-------ALQ--------PYKGWGLYC 170

Query: 171 QSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH 211
             K A     + L + L  +   +   S  PG +  ++ + 
Sbjct: 171 AGKAA----RDMLYQVLAAEEPSVRVLSYAPGPLDNDMQQL 207

>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444} Length = 319

 Score =  114 bits (286), Expect = 2e-30
 Identities = 39/211 (18%), Positives = 72/211 (34%), Gaps = 20/211 (9%)

Query: 4   VITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSL 63
            +TG  +G+G    R L  +G  V +      +      T+  E    +V  ++LD++S 
Sbjct: 12  FVTGGANGVGIGLVRQLLNQGCKVAIADIRQDSIDKALATLEAEGSGPEVMGVQLDVASR 71

Query: 64  ASVRNFASEYNIQHHQLNILINNAGIM--GTPFMLSKDNIELQFATNHLGHFLLTNLLLD 121
              +  A E   +   ++IL NNAG+         S D+ +     N  G        + 
Sbjct: 72  EGFKMAADEVEARFGPVSILCNNAGVNLFQPIEESSYDDWDWLLGVNLHGVVNGVTTFVP 131

Query: 122 TMKKTARKS-GGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANILHA 180
            M +  +      G ++N +S                           Y+ +K A    +
Sbjct: 132 RMVERVKAGEQKGGHVVNTASMA-------AFL--------AAGSPGIYNTTKFAVRGLS 176

Query: 181 NELARRLKEDGVDITANSVHPGAIATNIIRH 211
             L   L +    I  + + PG + + I   
Sbjct: 177 ESLHYSLLKYE--IGVSVLCPGLVKSYIYAS 205

>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ... Length = 286

 Score =  113 bits (284), Expect = 3e-30
 Identities = 48/214 (22%), Positives = 76/214 (35%), Gaps = 30/214 (14%)

Query: 3   IVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSS 62
           +++TGA+ GIG E A  LA  G HVV+  R     + V      E+ +A    +   +  
Sbjct: 31  VIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHC-LELGAASAHYIAGTMED 89

Query: 63  LASVRNFASEYNIQHHQLNILINNAGIM--GTPFMLSKDNIELQFATNHLGHFLLTNLLL 120
           +     F ++       L++LI N         F     ++      N L + +LT   L
Sbjct: 90  MTFAEQFVAQAGKLMGGLDMLILNHITNTSLNLFHDDIHHVRKSMEVNFLSYVVLTVAAL 149

Query: 121 DTMKKTARKSGGEGRIINVSS-EGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANILH 179
             +K+        G I+ VSS  G                   Y    AYS SK A  L 
Sbjct: 150 PMLKQ------SNGSIVVVSSLAGKV----------------AYPMVAAYSASKFA--LD 185

Query: 180 A--NELARRLKEDGVDITANSVHPGAIATNIIRH 211
              + + +      V+++      G I T     
Sbjct: 186 GFFSSIRKEYSVSRVNVSITLCVLGLIDTETAMK 219

>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2 Length = 267

 Score =  111 bits (280), Expect = 7e-30
 Identities = 50/220 (22%), Positives = 82/220 (37%), Gaps = 33/220 (15%)

Query: 3   IVITGATSGIGTETARVLAL---RGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELD 59
           I+ITG   G+G    + L        H+    R+    K++++        + +  +E+D
Sbjct: 24  ILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELEDLAKN---HSNIHILEID 80

Query: 60  LSSLASVRNFASEYN--IQHHQLNILINNAGIM---GTPFMLSKDNIELQFATNHLGHFL 114
           L +  +     ++     +   LN+L NNAGI         +    +     TN +   +
Sbjct: 81  LRNFDAYDKLVADIEGVTKDQGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPIM 140

Query: 115 LTNLLLDTMKKTARK------SGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRA 168
           L    L  +KK A+         G   IIN+SS    +  +         D   Y    A
Sbjct: 141 LAKACLPLLKKAAKANESQPMGVGRAAIINMSSILGSIQGNT--------DGGMY----A 188

Query: 169 YSQSKLA-NILHANELARRLKEDGVDITANSVHPGAIATN 207
           Y  SK A N      L+  L      I   S+HPG + T+
Sbjct: 189 YRTSKSALNAA-TKSLSVDLYPQR--IMCVSLHPGWVKTD 225

>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A* Length = 263

 Score =  111 bits (279), Expect = 9e-30
 Identities = 46/215 (21%), Positives = 85/215 (39%), Gaps = 32/215 (14%)

Query: 1   MDI-------VITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKV 53
           MD+       VITG++SGIG   A   A  G H+V+  R +    +   ++ ++    +V
Sbjct: 1   MDMGISGKVAVITGSSSGIGLAIAEGFAKEGAHIVLVARQVDRLHEAARSLKEKFG-VRV 59

Query: 54  DAMELDLSSLASVRNFASEYNIQHHQLNILINNAGIMG-TPFM-LSKDNIELQFATNHLG 111
             + +D+++   V              +IL+NNAG       M  + +  +  +    + 
Sbjct: 60  LEVAVDVATPEGVDAVVESVRSSFGGADILVNNAGTGSNETIMEAADEKWQFYWELLVMA 119

Query: 112 HFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQ 171
              L   L+  M+       G G II+ +S          ++               Y+ 
Sbjct: 120 AVRLARGLVPGMRA-----RGGGAIIHNASIC-------AVQ--------PLWYEPIYNV 159

Query: 172 SKLANILHANELARRLKEDGVDITANSVHPGAIAT 206
           +K A ++ +  LA  + +D   I  N ++PG I T
Sbjct: 160 TKAALMMFSKTLATEVIKDN--IRVNCINPGLILT 192

>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis} Length = 267

 Score =  111 bits (279), Expect = 1e-29
 Identities = 48/215 (22%), Positives = 84/215 (39%), Gaps = 35/215 (16%)

Query: 1   MDI-------VITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKV 53
           M +       ++TG+T+GIG   A  L   G +V++  R      +  + I  + P A +
Sbjct: 4   MHMQLKGKTALVTGSTAGIGKAIATSLVAEGANVLINGRREENVNETIKEIRAQYPDAIL 63

Query: 54  DAMELDLSSLASVRNFASEYNIQHHQLNILINNAGIMG-TPFM-LSKDNIELQFATNHLG 111
             +  DL +    ++   +Y     +++ILINN GI     +  +  ++    F  N + 
Sbjct: 64  QPVVADLGTEQGCQDVIEKYP----KVDILINNLGIFEPVEYFDIPDEDWFKLFEVNIMS 119

Query: 112 HFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQ 171
              LT   L  M +       EGR+I ++SE         I                YS 
Sbjct: 120 GVRLTRSYLKKMIER-----KEGRVIFIASE-------AAI--------MPSQEMAHYSA 159

Query: 172 SKLANILHANELARRLKEDGVDITANSVHPGAIAT 206
           +K   +  +  LA         +T N++ PG+  T
Sbjct: 160 TKTMQLSLSRSLAELTTGTN--VTVNTIMPGSTLT 192

>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp} Length = 301

 Score =  111 bits (280), Expect = 2e-29
 Identities = 47/225 (20%), Positives = 83/225 (36%), Gaps = 25/225 (11%)

Query: 4   VITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSL 63
           V+TG  SGIG  TA   A RG  +V+   D  A +     +  +        +  D+  L
Sbjct: 35  VVTGGASGIGLATATEFARRGARLVLSDVDQPALEQAVNGLRGQ--GFDAHGVVCDVRHL 92

Query: 64  ASVRNFASEYNIQHHQLNILINNAGIM--GTPFMLSKDNIELQFATNHLGHFLLTNLLLD 121
             +   A E       ++++ +NAGI+  G    ++ D+       +  G        L 
Sbjct: 93  DEMVRLADEAFRLLGGVDVVFSNAGIVVAGPLAQMNHDDWRWVIDIDLWGSIHAVEAFLP 152

Query: 122 TMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANILHAN 181
            +     + G  G I   +S         G+            G   Y  +K   +  A 
Sbjct: 153 RL----LEQGTGGHIAFTASFA-------GL--------VPNAGLGTYGVAKYGVVGLAE 193

Query: 182 ELARRLKEDGVDITANSVHPGAIATNIIRHNSLFRSMNTILHALP 226
            LAR +K +G  I  + + P  + T ++ ++   R  +  + A P
Sbjct: 194 TLAREVKPNG--IGVSVLCPMVVETKLVSNSERIRGADYGMSATP 236

>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} Length = 235

 Score =  109 bits (274), Expect = 3e-29
 Identities = 49/211 (23%), Positives = 83/211 (39%), Gaps = 28/211 (13%)

Query: 3   IVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSS 62
            VITGA+ GIG   AR LA  G  + +G R +   + +   +++E    +V    LD+S 
Sbjct: 5   AVITGASRGIGEAIARALARDGYALALGARSVDRLEKIAHELMQEQG-VEVFYHHLDVSK 63

Query: 63  LASVRNFASEYNIQHHQLNILINNAGIM-GTPFM-LSKDNIELQFATNHLGHFLLTNLLL 120
             SV  F+ +   +   +++++ NAG+        LS++        N LG +      L
Sbjct: 64  AESVEEFSKKVLERFGDVDVVVANAGLGYFKRLEELSEEEFHEMIEVNLLGVWRTLKAFL 123

Query: 121 DTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANILHA 180
           D++K+T     G   ++  S    R                       Y  +K A    A
Sbjct: 124 DSLKRT-----GGLALVTTSDVSAR----------------LIPYGGGYVSTKWA--ARA 160

Query: 181 NELARRLKEDGVDITANSVHPGAIATNIIRH 211
             L R  + +  D+    + PGA+ T     
Sbjct: 161 --LVRTFQIENPDVRFFELRPGAVDTYFGGS 189

>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix} Length = 260

 Score =  109 bits (275), Expect = 4e-29
 Identities = 40/220 (18%), Positives = 76/220 (34%), Gaps = 32/220 (14%)

Query: 1   MDI-------VITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKV 53
           MD+       V+T  +SG+G  +A  LA  G  +++  R+    +     I   +  A+V
Sbjct: 1   MDLGIQGKLAVVTAGSSGLGFASALELARNGARLLLFSRNREKLEAAASRIASLVSGAQV 60

Query: 54  DAMELDLSSLASVRNFASEYNIQHHQLNILINNAGI--MGTPFMLSKDNIELQFATNHLG 111
           D +  D+     +     +        +IL+ + G    G    L  ++ +  +      
Sbjct: 61  DIVAGDIREPGDIDRLFEKAR-DLGGADILVYSTGGPRPGRFMELGVEDWDESYRLLARS 119

Query: 112 HFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQ 171
              +     + M +      G GR++ + S                     +      + 
Sbjct: 120 AVWVGRRAAEQMVE-----KGWGRMVYIGSVTLL---------------RPWQDLALSNI 159

Query: 172 SKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH 211
            +L  I     LA  L   G  +T N+V P  I T+ +R 
Sbjct: 160 MRLPVIGVVRTLALELAPHG--VTVNAVLPSLILTDRVRS 197

>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 280

 Score =  108 bits (273), Expect = 1e-28
 Identities = 46/214 (21%), Positives = 86/214 (40%), Gaps = 29/214 (13%)

Query: 4   VITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKE-IPSAKVDAMELDLSS 62
           +ITG+++GIG  TA + A  G +V +  R     ++ ++ I+K  +   +V+++  D+++
Sbjct: 10  IITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTT 69

Query: 63  LASVRNFASEYNIQHHQLNILINNAGIMG-TPFMLSKDNIELQ-----FATNHLGHFLLT 116
                   +    Q  ++++L+NNAG      F  +  +  +         N      +T
Sbjct: 70  EDGQDQIINSTLKQFGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQAVIEMT 129

Query: 117 NLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLAN 176
             +   +  +       G I+NVSS         G +            F  Y+ +K A 
Sbjct: 130 KKVKPHLVASK------GEIVNVSSIVA------GPQ--------AQPDFLYYAIAKAAL 169

Query: 177 ILHANELARRLKEDGVDITANSVHPGAIATNIIR 210
             +    A  L + G  I  NSV PG + T    
Sbjct: 170 DQYTRSTAIDLAKFG--IRVNSVSPGMVETGFTN 201

>3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae} Length = 254

 Score =  108 bits (271), Expect = 1e-28
 Identities = 40/213 (18%), Positives = 82/213 (38%), Gaps = 33/213 (15%)

Query: 3   IVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSS 62
           I++TG + GIG     VL       V  V  +A  +   + + ++    +   +  D++ 
Sbjct: 5   ILVTGVSRGIGKSIVDVLFSLDKDTV--VYGVARSEAPLKKLKEKYGD-RFFYVVGDITE 61

Query: 63  LASVRNFASEYNIQHHQLNILINNAGIMG--TPFM-LSKDNIELQFATNHLGHFLLTNLL 119
            + ++   +     H +++ L+ NAG++        +  +  +  +  N      L  + 
Sbjct: 62  DSVLKQLVNAAVKGHGKIDSLVANAGVLEPVQNVNEIDVNAWKKLYDINFFSIVSLVGIA 121

Query: 120 LDTMKKTARKSGGEGRIINVSS-EGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANIL 178
           L  +KKT       G ++ VSS   +                  ++ + AY  SK A   
Sbjct: 122 LPELKKTN------GNVVFVSSDACNM----------------YFSSWGAYGSSKAA--- 156

Query: 179 HANELARRLKEDGVDITANSVHPGAIATNIIRH 211
             N  A  L  +   + A +V PG + T++  +
Sbjct: 157 -LNHFAMTLANEERQVKAIAVAPGIVDTDMQVN 188

>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 297

 Score =  108 bits (273), Expect = 2e-28
 Identities = 51/212 (24%), Positives = 94/212 (44%), Gaps = 27/212 (12%)

Query: 4   VITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKE-IPSAKVDAMELDLSS 62
           +ITG+++GIG   A + A  G  V +  R+    ++ K+ I+K  +P+ K++A+  D++ 
Sbjct: 30  IITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTE 89

Query: 63  LASVRNFASEYNIQHHQLNILINNAGIMGTPFML----SKDNIELQFATNHLGHFLLTNL 118
            +   +  +    +  +++IL+NNAG              +  +  F  N      +T  
Sbjct: 90  ASGQDDIINTTLAKFGKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQAVIEMTQK 149

Query: 119 LLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANIL 178
             + + KT       G I+NVSS               +  P  ++G+  Y+ +K A   
Sbjct: 150 TKEHLIKTK------GEIVNVSS--------------IVAGPQAHSGYPYYACAKAALDQ 189

Query: 179 HANELARRLKEDGVDITANSVHPGAIATNIIR 210
           +    A  L + G  +  NSV PGA+AT  + 
Sbjct: 190 YTRCTAIDLIQHG--VRVNSVSPGAVATGFMG 219

>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A Length = 252

 Score =  106 bits (267), Expect = 5e-28
 Identities = 50/217 (23%), Positives = 91/217 (41%), Gaps = 37/217 (17%)

Query: 3   IVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEI-PSAKVDAMELDLS 61
           I++TGA+ GIG E A   A  G  V++  R+    + V   I +E     +   ++L   
Sbjct: 15  ILVTGASDGIGREAAMTYARYGATVILLGRNEEKLRQVASHINEETGRQPQWFILDLLTC 74

Query: 62  SLASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIEL---QFATNHLGHFLLTNL 118
           +  + +  A    + + +L+ +++NAG++G    +S+ N ++       N    F+LT  
Sbjct: 75  TSENCQQLAQRIAVNYPRLDGVLHNAGLLGDVCPMSEQNPQVWQDVMQVNVNATFMLTQA 134

Query: 119 LLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSK----- 173
           LL  +     KS   G ++  SS   R                G   + AY+ SK     
Sbjct: 135 LLPLL----LKSDA-GSLVFTSSSVGR---------------QGRANWGAYAASKFATEG 174

Query: 174 LANILHANELARRLKEDGVDITANSVHPGAIATNIIR 210
           +  +L A+E  +R       +  N ++PG   T +  
Sbjct: 175 MMQVL-ADEYQQR-------LRVNCINPGGTRTAMRA 203

>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A* Length = 265

 Score =  106 bits (266), Expect = 8e-28
 Identities = 41/214 (19%), Positives = 72/214 (33%), Gaps = 34/214 (15%)

Query: 4   VITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSL 63
           V+TG +SGIG  T  +L   G  V    RD    +  +  + +  P A++ A   D+   
Sbjct: 12  VVTGGSSGIGLATVELLLEAGAAVAFCARDGERLRAAESALRQRFPGARLFASVCDVLDA 71

Query: 64  ASVRNFASEYNIQHHQLNILINNAGIMG-TPFM-LSKDNIELQFATNHLGHFLLTNLLLD 121
             VR FA          +IL+NNAG    + F   + +    +               L 
Sbjct: 72  LQVRAFAEACERTLGCASILVNNAGQGRVSTFAETTDEAWSEELQLKFFSVIHPVRAFLP 131

Query: 122 TMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANILH-- 179
            ++        +  I+ V+S               +          A S ++ A + +  
Sbjct: 132 QLESR-----ADAAIVCVNS---------------LLASQPEPHMVATSAAR-AGVKNLV 170

Query: 180 ---ANELARRLKEDGVDITANSVHPGAIATNIIR 210
              A E A +       +  N +  G + +   R
Sbjct: 171 RSMAFEFAPK------GVRVNGILIGLVESGQWR 198

>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A* Length = 260

 Score =  105 bits (265), Expect = 9e-28
 Identities = 50/209 (23%), Positives = 78/209 (37%), Gaps = 29/209 (13%)

Query: 4   VITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSL 63
           +++G   G+G    R +   G  VV G      GK +      E+       + LD++  
Sbjct: 11  LVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAM----AAELA-DAARYVHLDVTQP 65

Query: 64  ASVRNFASEYNIQHHQLNILINNAGIMGTPFM--LSKDNIELQFATNHLGHFLLTNLLLD 121
           A  +            L++L+NNAGI+    +   +    +     N  G FL    ++ 
Sbjct: 66  AQWKAAVDTAVTAFGGLHVLVNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGIRAVVK 125

Query: 122 TMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANILHAN 181
            MK+      G G IIN+SS        EG+         G      Y+ +K A      
Sbjct: 126 PMKEA-----GRGSIINISSI-------EGLA--------GTVACHGYTATKFAVRGLTK 165

Query: 182 ELARRLKEDGVDITANSVHPGAIATNIIR 210
             A  L   G  I  NS+HPG + T +  
Sbjct: 166 STALELGPSG--IRVNSIHPGLVKTPMTD 192

>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} Length = 247

 Score =  105 bits (264), Expect = 1e-27
 Identities = 58/212 (27%), Positives = 88/212 (41%), Gaps = 25/212 (11%)

Query: 3   IVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKE-IPSAKVDAMELDLS 61
           I++TGA  GIG   AR  A  G  VV+  R  A+  +V + I     P   + A+ L+ +
Sbjct: 17  ILVTGAARGIGAAAARAYAAHGASVVLLGRTEASLAEVSDQIKSAGQPQPLIIALNLENA 76

Query: 62  SLASVRNFASEYNIQHHQLNILINNAGIMG--TPFM-LSKDNIELQFATNHLGHFLLTNL 118
           +    R  A+    +  +L+ L++NA I+G  TP   L  ++       N    F+LT  
Sbjct: 77  TAQQYRELAARVEHEFGRLDGLLHNASIIGPRTPLEQLPDEDFMQVMHVNVNATFMLTRA 136

Query: 119 LLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANIL 178
           LL  +    ++S     I   SS   R                G   + AY  SK A   
Sbjct: 137 LLPLL----KRSED-ASIAFTSSSVGR---------------KGRANWGAYGVSKFATEG 176

Query: 179 HANELARRLKEDGVDITANSVHPGAIATNIIR 210
               LA  L+     + ANS++PGA  T +  
Sbjct: 177 LMQTLADELEGVT-AVRANSINPGATRTGMRA 207

>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A Length = 255

 Score =  105 bits (264), Expect = 1e-27
 Identities = 54/209 (25%), Positives = 85/209 (40%), Gaps = 31/209 (14%)

Query: 4   VITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSL 63
           ++ G T G+G  T R L   G  V++  R+ +    ++E         +V A+  D++ L
Sbjct: 12  IVIGGTHGMGLATVRRLVEGGAEVLLTGRNESNIARIREEF-----GPRVHALRSDIADL 66

Query: 64  ASVRNFASEYNIQHHQLNILINNAGIMG-TPFM-LSKDNIELQFATNHLGHFLLTNLLLD 121
             +    +        +++L  NAG+    PF  +S+ + + QFA N  G F     L  
Sbjct: 67  NEIAVLGAAAGQTLGAIDLLHINAGVSELEPFDQVSEASYDRQFAVNTKGAFFTVQRLTP 126

Query: 122 TMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANILHAN 181
            +++        G I+  SS               + D  G+ G   YS SK A +  A+
Sbjct: 127 LIRE-------GGSIVFTSS---------------VADEGGHPGMSVYSASKAALVSFAS 164

Query: 182 ELARRLKEDGVDITANSVHPGAIATNIIR 210
            LA  L   G  I  NSV PG I T    
Sbjct: 165 VLAAELLPRG--IRVNSVSPGFIDTPTKG 191

>2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus} Length = 207

 Score =  104 bits (261), Expect = 1e-27
 Identities = 42/214 (19%), Positives = 74/214 (34%), Gaps = 41/214 (19%)

Query: 1   MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDL 60
           M ++ITGAT G+G   AR  AL+G  +++  R   A  ++   +          A+  DL
Sbjct: 1   MRVLITGATGGLGGAFAR--ALKGHDLLLSGRRAGALAELAREV-------GARALPADL 51

Query: 61  SSLASVRNFASEYNIQHHQLNILINNAGIMGT-PFM-LSKDNIELQFATNHLGHFLLTNL 118
           +     +    E       L++L++  G  G        +D +E   A +     L    
Sbjct: 52  ADELEAKALLEE----AGPLDLLVHAVGKAGRASVREAGRDLVEEMLAAH----LLTAAF 103

Query: 119 LLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANIL 178
           +L   +          R +   +                       GF AY+ +K A   
Sbjct: 104 VLKHARF-----QKGARAVFFGAYP-------RYV--------QVPGFAAYAAAKGALEA 143

Query: 179 HANELARRLKEDGVDITANSVHPGAIATNIIRHN 212
           +     + L  +GV +    V   A+AT +    
Sbjct: 144 YLEAARKELLREGVHLVL--VRLPAVATGLWAPL 175

>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A* Length = 254

 Score =  105 bits (264), Expect = 1e-27
 Identities = 49/210 (23%), Positives = 72/210 (34%), Gaps = 29/210 (13%)

Query: 4   VITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSL 63
           +ITG   G+G E AR     G  VV+       G        +E+         LD++  
Sbjct: 9   IITGGARGLGAEAARQAVAAGARVVLADVLDEEGAAT----ARELG-DAARYQHLDVTIE 63

Query: 64  ASVRNFASEYNIQHHQLNILINNAGI--MGTPFMLSKDNIELQFATNHLGHFLLTNLLLD 121
              +   +    +   ++ L+NNAGI         S +        N  G F+    ++ 
Sbjct: 64  EDWQRVVAYAREEFGSVDGLVNNAGISTGMFLETESVERFRKVVEINLTGVFIGMKTVIP 123

Query: 122 TMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANILHAN 181
            MK       G G I+N+SS         G+         G     +Y  SK      + 
Sbjct: 124 AMKDA-----GGGSIVNISSA-------AGLM--------GLALTSSYGASKWGVRGLSK 163

Query: 182 ELARRLKEDGVDITANSVHPGAIATNIIRH 211
             A  L  D   I  NSVHPG   T +   
Sbjct: 164 LAAVELGTDR--IRVNSVHPGMTYTPMTAE 191

>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2 Length = 270

 Score =  105 bits (264), Expect = 2e-27
 Identities = 52/211 (24%), Positives = 78/211 (36%), Gaps = 32/211 (15%)

Query: 4   VITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSL 63
           V+TG   GIG    R     G  VV+  +D + G      + +E+P A    +  D++  
Sbjct: 13  VVTGGGRGIGAGIVRAFVNSGARVVICDKDESGG----RALEQELPGAV--FILCDVTQE 66

Query: 64  ASVRNFASEYNIQHHQLNILINNAGIMGTPFML---SKDNIELQFATNHLGHFLLTNLLL 120
             V+   SE   +  +L+ ++NNAG    P      S          N LG + LT L L
Sbjct: 67  DDVKTLVSETIRRFGRLDCVVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLAL 126

Query: 121 DTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANILHA 180
             ++K       +G +IN+SS         G          G      Y  +K A     
Sbjct: 127 PYLRK------SQGNVINISSLV-------GAI--------GQAQAVPYVATKGAVTAMT 165

Query: 181 NELARRLKEDGVDITANSVHPGAIATNIIRH 211
             LA      G  +  N + PG I T +   
Sbjct: 166 KALALDESPYG--VRVNCISPGNIWTPLWEE 194

>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2 Length = 253

 Score =  104 bits (263), Expect = 2e-27
 Identities = 50/211 (23%), Positives = 80/211 (37%), Gaps = 30/211 (14%)

Query: 4   VITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSL 63
           ++TG  SG+G E  ++L   G  V     + AAG+ +      E+   +   +  D+SS 
Sbjct: 10  LVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQL----AAEL-GERSMFVRHDVSSE 64

Query: 64  ASVRNFASEYNIQHHQLNILINNAGI--MGTPFMLSKDNIELQFATNHLGHFLLTNLLLD 121
           A      +    +   LN+L+NNAGI   G       ++       N    F+     + 
Sbjct: 65  ADWTLVMAAVQRRLGTLNVLVNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQQGIA 124

Query: 122 TMKKTARKSGGEGRIINVSS-EGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANILHA 180
            MK+      G G IIN++S                         +  YS SK A     
Sbjct: 125 AMKE-----TG-GSIINMASVSSWL----------------PIEQYAGYSASKAAVSALT 162

Query: 181 NELARRLKEDGVDITANSVHPGAIATNIIRH 211
              A   ++ G  I  NS+HP  I T +++ 
Sbjct: 163 RAAALSCRKQGYAIRVNSIHPDGIYTPMMQA 193

>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A Length = 251

 Score =  104 bits (262), Expect = 2e-27
 Identities = 51/211 (24%), Positives = 74/211 (35%), Gaps = 28/211 (13%)

Query: 4   VITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEI-PSAKVDAMELDLSS 62
           +ITG T GIG   A      G  V++  R    G+       K +    ++   + D S 
Sbjct: 10  IITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKA----AKSVGTPDQIQFFQHDSSD 65

Query: 63  LASVRNFASEYNIQHHQLNILINNAGI--MGTPFMLSKDNIELQFATNHLGHFLLTNLLL 120
                            ++ L+NNAGI    +    +        A N  G F  T L +
Sbjct: 66  EDGWTKLFDATEKAFGPVSTLVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGTRLGI 125

Query: 121 DTMKKTARKSGGEGRIINVSS-EGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANILH 179
             M    +  G    IIN+SS EG                  G     AY+ SK A  + 
Sbjct: 126 QRM----KNKGLGASIINMSSIEGFV----------------GDPSLGAYNASKGAVRIM 165

Query: 180 ANELARRLKEDGVDITANSVHPGAIATNIIR 210
           +   A        D+  N+VHPG I T ++ 
Sbjct: 166 SKSAALDCALKDYDVRVNTVHPGYIKTPLVD 196

>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2 Length = 267

 Score =  104 bits (262), Expect = 3e-27
 Identities = 50/213 (23%), Positives = 80/213 (37%), Gaps = 35/213 (16%)

Query: 4   VITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSL 63
           ++TGA  GIG   A  L L+G  V +   ++ AG   K  + ++    K   ++ D++  
Sbjct: 11  LVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQ 70

Query: 64  ASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTM 123
             +R+   +      +L+IL+NNAG+          N E     N +     T L LD M
Sbjct: 71  QQLRDTFRKVVDHFGRLDILVNNAGVNNE------KNWEKTLQINLVSVISGTYLGLDYM 124

Query: 124 KKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANIL----- 178
            K  +  G  G IIN+SS               +           Y  SK   +      
Sbjct: 125 SK--QNGGEGGIIINMSS---------------LAGLMPVAQQPVYCASKHGIVGFTRSA 167

Query: 179 -HANELARRLKEDGVDITANSVHPGAIATNIIR 210
             A  L          +  N++ PG + T I+ 
Sbjct: 168 ALAANLMNS------GVRLNAICPGFVNTAILE 194

>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris} Length = 252

 Score =  103 bits (260), Expect = 4e-27
 Identities = 44/215 (20%), Positives = 74/215 (34%), Gaps = 30/215 (13%)

Query: 3   IVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSA--KVDAMELDL 60
           + + GA   IG E A+  A  G  V  G R+          +V EI +A  ++ A  LD 
Sbjct: 10  VAVIGAGDYIGAEIAKKFAAEGFTVFAGRRNGEKL----APLVAEIEAAGGRIVARSLDA 65

Query: 61  SSLASVRNFASEYNIQHHQLNILINNAGIM-GTPFM-LSKDNIELQFATNHLGHFLLTNL 118
            +   V  F +  +  H  L + I N G     P +  +       +       F+    
Sbjct: 66  RNEDEVTAFLNAAD-AHAPLEVTIFNVGANVNFPILETTDRVFRKVWEMACWAGFVSGRE 124

Query: 119 LLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANIL 178
               M        G+G+I    +          +R        G +GF A++ +K     
Sbjct: 125 SARLMLA-----HGQGKIFFTGATA-------SLR--------GGSGFAAFASAKFGLRA 164

Query: 179 HANELARRLKEDGVDITANSVHPGAIATNIIRHNS 213
            A  +AR L    +   A+ +    + T  +R   
Sbjct: 165 VAQSMARELMPKNI-HVAHLIIDSGVDTAWVRERR 198

>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli} Length = 273

 Score =  104 bits (262), Expect = 4e-27
 Identities = 45/209 (21%), Positives = 74/209 (35%), Gaps = 31/209 (14%)

Query: 4   VITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSL 63
           VITGATSGIG   A+     G  V +  R            + EI       ++ D ++L
Sbjct: 33  VITGATSGIGLAAAKRFVAEGARVFITGRRKDVLDAA----IAEIG-GGAVGIQADSANL 87

Query: 64  ASVRNFASEYNIQHHQLNILINNAGIMG-TPFM-LSKDNIELQFATNHLGHFLLTNLLLD 121
           A +     +   +  ++++L  NAG     P   ++++  +  F  N  G          
Sbjct: 88  AELDRLYEKVKAEAGRIDVLFVNAGGGSMLPLGEVTEEQYDDTFDRNVKGVLF------- 140

Query: 122 TMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANILHAN 181
           T++K          ++   S                   +G   F  Y+ SK A    A 
Sbjct: 141 TVQKALPLLARGSSVVLTGS---------------TAGSTGTPAFSVYAASKAALRSFAR 185

Query: 182 ELARRLKEDGVDITANSVHPGAIATNIIR 210
                LK+ G  I  N++ PG   T  + 
Sbjct: 186 NWILDLKDRG--IRINTLSPGPTETTGLV 212

>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2 Length = 267

 Score =  104 bits (261), Expect = 5e-27
 Identities = 53/214 (24%), Positives = 85/214 (39%), Gaps = 33/214 (15%)

Query: 4   VITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSL 63
           +ITG  SG+G  TA  LA  G  + +        +  K  +++  P A+V     D+S  
Sbjct: 17  LITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDE 76

Query: 64  ASVRNFASEYNIQHHQLNILINNAGIMG--TPFM-LSKDNIELQFATNHLGHFLLTNLLL 120
           A V  + +    +  +++   NNAGI G   P    +    +   + N  G FL    +L
Sbjct: 77  AQVEAYVTATTERFGRIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLEKVL 136

Query: 121 DTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANIL-- 178
             M++      G G ++N +S G       GIR        G      Y+ +K   +   
Sbjct: 137 KIMREQ-----GSGMVVNTASVG-------GIR--------GIGNQSGYAAAKHGVVGLT 176

Query: 179 --HANELARRLKEDGVDITANSVHPGAIATNIIR 210
              A E  R        I  N++ PGAI T ++ 
Sbjct: 177 RNSAVEYGRY------GIRINAIAPGAIWTPMVE 204

>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A* Length = 254

 Score =  103 bits (259), Expect = 6e-27
 Identities = 52/209 (24%), Positives = 80/209 (38%), Gaps = 27/209 (12%)

Query: 3   IVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLS- 61
           ++   A  GIG +T+R L  R +   + +  +     + E      P   +     D++ 
Sbjct: 8   VIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTALAELK-AINPKVNITFHTYDVTV 66

Query: 62  SLASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLD 121
            +A  +    +   Q   ++ILIN AGI+          IE   A N  G    T  +LD
Sbjct: 67  PVAESKKLLKKIFDQLKTVDILINGAGIL------DDHQIERTIAINFTGLVNTTTAILD 120

Query: 122 TMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANILHAN 181
              K  RK G  G I N+ S         G            +    YS SK A +   N
Sbjct: 121 FWDK--RKGGPGGIIANICS-------VTGFN--------AIHQVPVYSASKAAVVSFTN 163

Query: 182 ELARRLKEDGVDITANSVHPGAIATNIIR 210
            LA+     G  +TA S++PG   T ++ 
Sbjct: 164 SLAKLAPITG--VTAYSINPGITRTPLVH 190

>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti} Length = 264

 Score =  103 bits (260), Expect = 6e-27
 Identities = 54/209 (25%), Positives = 87/209 (41%), Gaps = 32/209 (15%)

Query: 3   IVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSA--KVDAMELDL 60
           I+ITGA+ GIG   AR L + G  +++G R     +   E I  EI  A     A  LD+
Sbjct: 7   ILITGASGGIGEGIARELGVAGAKILLGARR----QARIEAIATEIRDAGGTALAQVLDV 62

Query: 61  SSLASVRNFASEYNIQHHQLNILINNAGIMGTPFM--LSKDNIELQFATNHLGHFLLTNL 118
           +   SV  FA        ++++L+NNAG+M    +  +  D  E     N  G       
Sbjct: 63  TDRHSVAAFAQAAVDTWGRIDVLVNNAGVMPLSPLAAVKVDEWERMIDVNIKGVLWGIGA 122

Query: 119 LLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANIL 178
           +L  M+  A++S   G+IIN+ S G                         Y  +K A   
Sbjct: 123 VLPIME--AQRS---GQIINIGSIGALSVV------------PTAAV---YCATKFA--- 159

Query: 179 HANELARRLKEDGVDITANSVHPGAIATN 207
               ++  L+++  +I    V+PG + + 
Sbjct: 160 -VRAISDGLRQESTNIRVTCVNPGVVESE 187

>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis} Length = 266

 Score =  103 bits (258), Expect = 1e-26
 Identities = 53/216 (24%), Positives = 81/216 (37%), Gaps = 36/216 (16%)

Query: 4   VITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSL 63
           +ITGAT GIG + AR  A  G  +V+  RD++     +  + ++     V  + +DL+  
Sbjct: 24  LITGATKGIGADIARAFAAAGARLVLSGRDVSELDAARRALGEQFG-TDVHTVAIDLAEP 82

Query: 64  ASVRNFASEYNIQHHQLNILINNAGI-MGTPFM-LSKDNIELQFATNHLGHFLLTNLLLD 121
            +    A         L++L+NNAGI    P +       +   A N     LL + +  
Sbjct: 83  DAPAELARRAAEAFGGLDVLVNNAGISHPQPVVDTDPQLFDATIAVNLRAPALLASAVGK 142

Query: 122 TMKKTARKSGGEGRIINVSS-EGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANILH- 179
            M      +G  G II V+S                           AY  SK A ++  
Sbjct: 143 AM----VAAGEGGAIITVASAAALA----------------PLPDHYAYCTSK-AGLVMA 181

Query: 180 ----ANELARRLKEDGVDITANSVHPGAIATNIIRH 211
               A EL          I ANSV P  + T + + 
Sbjct: 182 TKVLARELGPH------GIRANSVCPTVVLTEMGQR 211

>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} Length = 264

 Score =  102 bits (257), Expect = 1e-26
 Identities = 44/217 (20%), Positives = 84/217 (38%), Gaps = 42/217 (19%)

Query: 4   VITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSA--KVDAMELDLS 61
           VI+G    +GT  AR  A +G  +V+  R +   +DV     K++     +  ++  D++
Sbjct: 15  VISGVGPALGTTLARRCAEQGADLVLAARTVERLEDV----AKQVTDTGRRALSVGTDIT 70

Query: 62  SLASVRNFASEYNIQHHQLNILINNAGIMG--TPFM-LSKDNIELQFATNHLGHFLLTNL 118
             A V +   E    + +++++INNA  +    PF   + +++         G   L   
Sbjct: 71  DDAQVAHLVDETMKAYGRVDVVINNAFRVPSMKPFANTTFEHMRDAIELTVFGALRLIQG 130

Query: 119 LLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANIL 178
               +++       +G ++NV+S                        + AY  +K + +L
Sbjct: 131 FTPALEE------SKGAVVNVNSMV-------VRH--------SQAKYGAYKMAK-SALL 168

Query: 179 H-----ANELARRLKEDGVDITANSVHPGAIATNIIR 210
                 A EL  +       I  NSV PG I    ++
Sbjct: 169 AMSQTLATELGEK------GIRVNSVLPGYIWGGTLK 199

>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius} Length = 254

 Score =  102 bits (256), Expect = 2e-26
 Identities = 56/216 (25%), Positives = 84/216 (38%), Gaps = 39/216 (18%)

Query: 4   VITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSA--KVDAMELDLS 61
           ++TGA SGIG   A+  AL    VV           +    V+E+     +V  ++ D+S
Sbjct: 11  IVTGAGSGIGRAIAKKFALNDSIVVAVELLEDRLNQI----VQELRGMGKEVLGVKADVS 66

Query: 62  SLASVRNFASEYNIQHHQLNILINNAGIMG--TPFM-LSKDNIELQFATNHLGHFLLTNL 118
               V  F       + ++++L NNAGIM   TP   +S +  E   A N    F  +  
Sbjct: 67  KKKDVEEFVRRTFETYSRIDVLCNNAGIMDGVTPVAEVSDELWERVLAVNLYSAFYSSRA 126

Query: 119 LLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANIL 178
           ++  M K      G+G I+N +S         GIR        G      Y+ +K   I 
Sbjct: 127 VIPIMLKQ-----GKGVIVNTASIA-------GIR--------GGFAGAPYTVAKHGLIG 166

Query: 179 ----HANELARRLKEDGVDITANSVHPGAIATNIIR 210
                A     +       I A +V PG + TNI  
Sbjct: 167 LTRSIAAHYGDQ------GIRAVAVLPGTVKTNIGL 196

>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus} Length = 261

 Score =  102 bits (256), Expect = 2e-26
 Identities = 53/211 (25%), Positives = 85/211 (40%), Gaps = 28/211 (13%)

Query: 4   VITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSL 63
           +ITGA SG G   A+  A  G  VV+  RD A  + V      EI      A+  D+S  
Sbjct: 13  LITGAGSGFGEGMAKRFAKGGAKVVIVDRDKAGAERV----AGEIG-DAALAVAADISKE 67

Query: 64  ASVRNFASEYNIQHHQLNILINNAGIMGTP---FMLSKDNIELQFATNHLGHFLLTNLLL 120
           A V         +  +++IL+NNAGI   P    ++  +  +     N  G +L+T+ L+
Sbjct: 68  ADVDAAVEAALSKFGKVDILVNNAGIGHKPQNAELVEPEEFDRIVGVNVRGVYLMTSKLI 127

Query: 121 DTMKKTARKSGGE-GRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANILH 179
              K+    + G+   I+NV+S G         R               Y+ +K   +  
Sbjct: 128 PHFKE--NGAKGQECVILNVASTG-------AGR--------PRPNLAWYNATKGWVVSV 170

Query: 180 ANELARRLKEDGVDITANSVHPGAIATNIIR 210
              LA  L      I   +++P A  T ++ 
Sbjct: 171 TKALAIELAPAK--IRVVALNPVAGETPLLT 199

>3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum} Length = 245

 Score =  101 bits (255), Expect = 2e-26
 Identities = 37/212 (17%), Positives = 73/212 (34%), Gaps = 36/212 (16%)

Query: 3   IVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSS 62
            V+TGAT G+G E  + L+   +   +G        +    + +      V+ +E D+  
Sbjct: 8   AVVTGATGGMGIEIVKDLSRDHIVYALGRN-----PEHLAALAEIE---GVEPIESDIVK 59

Query: 63  LASVRNFASEYNIQHHQLNILINNAGIM-GTPFM-LSKDNIELQFATNHLGHFLLTNLLL 120
                    +       ++ L++ A +   T     S          N +    L+  LL
Sbjct: 60  EVLEEGGVDKLK-NLDHVDTLVHAAAVARDTTIEAGSVAEWHAHLDLNVIVPAELSRQLL 118

Query: 121 DTMKKTARKSGGEGRIINVSS-EGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANILH 179
             ++         G +I ++S  G+                  + G   Y+ SK A    
Sbjct: 119 PALRA------ASGCVIYINSGAGNG----------------PHPGNTIYAASKHALRGL 156

Query: 180 ANELARRLKEDGVDITANSVHPGAIATNIIRH 211
           A+   +    +G  I  ++V PG   T +++ 
Sbjct: 157 ADAFRKEEANNG--IRVSTVSPGPTNTPMLQG 186

>1jtv_A 17 beta-hydroxysteroid dehydrogenase type 1; steroid hormones, alternative binding mode, oxidoreductase; HET: TES; 1.54A {Homo sapiens} SCOP: c.2.1.2 PDB: 1dht_A* 1equ_A* 1bhs_A* 1i5r_A* 1qyv_A* 1qyw_A* 1qyx_A* 3dey_X* 3dhe_A* 3hb4_X* 3hb5_X* 3klp_X* 3km0_A* 1iol_A* 1fds_A* 1fdt_A* 3klm_X* 1fdw_A* 1fdu_A* 1fdv_A* ... Length = 327

 Score =  103 bits (259), Expect = 3e-26
 Identities = 52/240 (21%), Positives = 87/240 (36%), Gaps = 41/240 (17%)

Query: 3   IVITGATSGIGTETARVLA---LRGVHVVMGVRDIAAGKDVKETIVKE-IPSAKVDAMEL 58
           ++ITG +SGIG   A  LA    +   V   +RD+     + E       P   ++ ++L
Sbjct: 5   VLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQL 64

Query: 59  DLSSLASVRNFASEYNIQHHQLNILINNAGI--MGTPFMLSKDNIELQFATNHLGHFLLT 116
           D+    SV        +   ++++L+ NAG+  +G    L +D +      N +G   + 
Sbjct: 65  DVRDSKSVAAARER--VTEGRVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRML 122

Query: 117 NLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLAN 176
              L  MK+  R S   GR++   S G  +             P  +N    Y  SK   
Sbjct: 123 QAFLPDMKR--RGS---GRVLVTGSVGGLMGL-----------P--FND--VYCASK--- 159

Query: 177 ILHANE-----LARRLKEDGVDITANSVHPGAIATNIIRHNSLFRSMNTILHALPGIAGK 231
              A E     LA  L   GV ++   +  G + T       L      +         +
Sbjct: 160 --FALEGLCESLAVLLLPFGVHLSL--IECGPVHTA-FMEKVLGSPEEVLDRTDIHTFHR 214

>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus} Length = 230

 Score =  100 bits (252), Expect = 5e-26
 Identities = 39/212 (18%), Positives = 70/212 (33%), Gaps = 41/212 (19%)

Query: 3   IVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSS 62
           IVITGA+SG+G E A++    G    +  R     +    T+   + S  V     DL+S
Sbjct: 4   IVITGASSGLGAELAKLYDAEGKATYLTGRS----ESKLSTVTNCL-SNNVGYRARDLAS 58

Query: 63  LASVRNFASEYNIQHHQLNILINNAGIMGT-PFM-LSKDNIELQFATNHLGHFLLTNLLL 120
              V     +        + ++++AG            + I+     N      +   L+
Sbjct: 59  HQEVEQLFEQL---DSIPSTVVHSAGSGYFGLLQEQDPEQIQTLIENNLSSAINVLRELV 115

Query: 121 DTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNG----FRAYSQSKLAN 176
              K   +       ++ + S   +    +          S Y       +   +S    
Sbjct: 116 KRYK--DQPVN----VVMIMSTAAQQPKAQE---------STYCAVKWAVKGLIES---- 156

Query: 177 ILHANELARRLKEDGVDITANSVHPGAIATNI 208
                 +   LK   + I A  V+PG +AT  
Sbjct: 157 ------VRLELKGKPMKIIA--VYPGGMATEF 180

>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A* Length = 255

 Score =  101 bits (253), Expect = 5e-26
 Identities = 52/209 (24%), Positives = 82/209 (39%), Gaps = 35/209 (16%)

Query: 4   VITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSL 63
           +ITGA +GIG E A   A  G  VV+   +  A   V + I +     +  A   D++S 
Sbjct: 15  IITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQL--GGQAFACRCDITSE 72

Query: 64  ASVRNFASEYNIQHHQLNILINNAGI-MGTPFMLSKDNIELQFATNHLGHFLLTNLLLDT 122
             +   A     +  +++IL+NNAG     PF +   +    +  N    F L+ L+   
Sbjct: 73  QELSALADFAISKLGKVDILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPE 132

Query: 123 MKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANILH--- 179
           M+K      G G I+ ++S                          +Y+ SK A   H   
Sbjct: 133 MEKN-----GGGVILTITSMA-------AEN--------KNINMTSYASSK-AAASHLVR 171

Query: 180 --ANELARRLKEDGVDITANSVHPGAIAT 206
             A +L  +      +I  N + PGAI T
Sbjct: 172 NMAFDLGEK------NIRVNGIAPGAILT 194

>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5} Length = 262

 Score =  100 bits (252), Expect = 7e-26
 Identities = 53/212 (25%), Positives = 81/212 (38%), Gaps = 29/212 (13%)

Query: 4   VITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSL 63
           V+TGA+ GIG   AR L   G  VV+  RD+   + V+  IV      + ++   DLS  
Sbjct: 33  VVTGASRGIGAAIARKLGSLGARVVLTARDVEKLRAVEREIVAA--GGEAESHACDLSHS 90

Query: 64  ASVRNFASEYNIQHHQLNILINNAGIMG--TPFM-LSKDNIELQFATNHLGHFLLTNLLL 120
            ++  FA+     H + ++L+NNAG+     P   +     +   A N    +LL     
Sbjct: 91  DAIAAFATGVLAAHGRCDVLVNNAGVGWFGGPLHTMKPAEWDALIAVNLKAPYLLLRAFA 150

Query: 121 DTMKKTARKSGGEGRIINVSSE-GHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANILH 179
             M     K    G IIN+SS  G                        AY+ SK      
Sbjct: 151 PAMIA--AKR---GHIINISSLAGKN----------------PVADGAAYTASKWGLNGL 189

Query: 180 ANELARRLKEDGVDITANSVHPGAIATNIIRH 211
               A  L++    +  + V PG++ T     
Sbjct: 190 MTSAAEELRQHQ--VRVSLVAPGSVRTEFGVG 219

>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2 Length = 279

 Score =  101 bits (253), Expect = 8e-26
 Identities = 54/214 (25%), Positives = 88/214 (41%), Gaps = 24/214 (11%)

Query: 3   IVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSS 62
            ++TGA+ GIG   AR L  +G+ VV   R +   +++            +     DLS+
Sbjct: 35  ALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSN 94

Query: 63  LASVRNFASEYNIQHHQLNILINNAGIM-GTPFM-LSKDNIELQFATNHLGHFLLTNLLL 120
              + +  S    QH  ++I INNAG+      +  S    +  F  N L   + T    
Sbjct: 95  EEDILSMFSAIRSQHSGVDICINNAGLARPDTLLSGSTSGWKDMFNVNVLALSICTREAY 154

Query: 121 DTMKKTARKSGGEGRIINVSS-EGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANILH 179
            +MK+   ++  +G IIN++S  GHR+                 +    YS +K A  + 
Sbjct: 155 QSMKE---RNVDDGHIININSMSGHRV--------------LPLSVTHFYSATKYA--VT 195

Query: 180 A-NELARR-LKEDGVDITANSVHPGAIATNIIRH 211
           A  E  R+ L+E    I A  + PG + T     
Sbjct: 196 ALTEGLRQELREAQTHIRATCISPGVVETQFAFK 229

>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti} Length = 283

 Score =  101 bits (253), Expect = 1e-25
 Identities = 67/210 (31%), Positives = 93/210 (44%), Gaps = 25/210 (11%)

Query: 4   VITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSL 63
           +ITGA SGIG  TA  LA  GV V    R     ++V + IV      +  A+E D+S  
Sbjct: 32  LITGAGSGIGRATALALAADGVTVGALGRTRTEVEEVADEIVGA--GGQAIALEADVSDE 89

Query: 64  ASVRNFASEYNIQHHQLNILINNAGIMG--TPFM-LSKDNIELQFATNHLGHFLLTNLLL 120
             +RN   +  ++   L+I++ NAGI G   P   L     +   A N  G FL  +L +
Sbjct: 90  LQMRNAVRDLVLKFGHLDIVVANAGINGVWAPIDDLKPFEWDETIAVNLRGTFLTLHLTV 149

Query: 121 DTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANILHA 180
             +K+      G G I+ VSS         G R           G  AY+ +K A +   
Sbjct: 150 PYLKQR-----GGGAIVVVSSIN-------GTR------TFTTPGATAYTATKAAQVAIV 191

Query: 181 NELARRLKEDGVDITANSVHPGAIATNIIR 210
            +LA  L +    I  N+V PGAI TNI  
Sbjct: 192 QQLALELGKHH--IRVNAVCPGAIETNISD 219

>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus} Length = 250

 Score = 99.9 bits (250), Expect = 1e-25
 Identities = 50/212 (23%), Positives = 77/212 (36%), Gaps = 28/212 (13%)

Query: 4   VITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSL 63
           ++TGA+SG G   A     RG  V          ++   T        KV  +  D++  
Sbjct: 6   IVTGASSGNGLAIATRFLARGDRVAALDLSAETLEETARTHWHAYA-DKVLRVRADVADE 64

Query: 64  ASVRNFASEYNIQHHQLNILINNAGIMG----TPFM-LSKDNIELQFATNHLGHFLLTNL 118
             V    +    Q   +++L+NNAGI G            +  +   A N  G FL    
Sbjct: 65  GDVNAAIAATMEQFGAIDVLVNNAGITGNSEAGVLHTTPVEQFDKVMAVNVRGIFLGCRA 124

Query: 119 LLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANIL 178
           +L  M        G G I+N++S          +          + G  AY+ SK A + 
Sbjct: 125 VLPHMLLQ-----GAGVIVNIASVA-------SLV--------AFPGRSAYTTSKGAVLQ 164

Query: 179 HANELARRLKEDGVDITANSVHPGAIATNIIR 210
               +A      G  I  N+V PG I T + +
Sbjct: 165 LTKSVAVDYAGSG--IRCNAVCPGMIETPMTQ 194

>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A* Length = 261

 Score = 99.9 bits (250), Expect = 1e-25
 Identities = 50/215 (23%), Positives = 88/215 (40%), Gaps = 36/215 (16%)

Query: 4   VITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAM--ELDLS 61
           VITG+++G+G   A   A     VV+  R          ++++EI     +A+  + D++
Sbjct: 11  VITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDE---ANSVLEEIKKVGGEAIAVKGDVT 67

Query: 62  SLASVRNFASEYNIQHHQLNILINNAGIMG-TPFM-LSKDNIELQFATNHLGHFLLTNLL 119
             + V N       +  +L+++INNAG+        +S  +      TN  G FL +   
Sbjct: 68  VESDVINLVQSAIKEFGKLDVMINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFLGSREA 127

Query: 120 LDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANIL- 178
           +        ++  +G +IN+SS               +++   +  F  Y+ SK    L 
Sbjct: 128 IKYF----VENDIKGTVINMSS---------------VHEKIPWPLFVHYAASKGGMKLM 168

Query: 179 ---HANELARRLKEDGVDITANSVHPGAIATNIIR 210
               A E A +       I  N++ PGAI T I  
Sbjct: 169 TETLALEYAPK------GIRVNNIGPGAINTPINA 197

>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti} Length = 280

 Score =   99 bits (250), Expect = 2e-25
 Identities = 51/210 (24%), Positives = 74/210 (35%), Gaps = 26/210 (12%)

Query: 4   VITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSL 63
           ++TGA+SGIG   A + A  G  VV+  R+  A  ++ + I       +  A+  D+   
Sbjct: 12  IVTGASSGIGRAAALLFAREGAKVVVTARNGNALAELTDEIAGG--GGEAAALAGDVGDE 69

Query: 64  ASVRNFASEYNIQHHQLNILINNAGIMG--TPFM-LSKDNIELQFATNHLGHFLLTNLLL 120
           A           +   L+   NNAG +G       LS +       TN    FL     +
Sbjct: 70  ALHEALVELAVRRFGGLDTAFNNAGALGAMGEISSLSVEGWRETLDTNLTSAFLAAKYQV 129

Query: 121 DTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANILHA 180
             +       GG G +   SS     A              G+ G   Y+ SK   I   
Sbjct: 130 PAI----AALGG-GSLTFTSSFVGHTA--------------GFAGVAPYAASKAGLIGLV 170

Query: 181 NELARRLKEDGVDITANSVHPGAIATNIIR 210
             LA  L   G  I  N++ PG   T    
Sbjct: 171 QALAVELGARG--IRVNALLPGGTDTPANF 198

>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus} Length = 234

 Score = 98.8 bits (247), Expect = 2e-25
 Identities = 50/208 (24%), Positives = 81/208 (38%), Gaps = 32/208 (15%)

Query: 3   IVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSS 62
           ++ITGA+ GIG  TAR+L  +G  V +  RD    +   + +  E+  A    +  D+  
Sbjct: 8   VLITGASRGIGEATARLLHAKGYRVGLMARD----EKRLQALAAELEGAL--PLPGDVRE 61

Query: 63  LASVRNFASEYNIQHHQLNILINNAGIMGTPFM--LSKDNIELQFATNHLGHFLLTNLLL 120
                   +       +L+ L+NNAG+     +  L+ +   L   TN  G FL     +
Sbjct: 62  EGDWARAVAAMEEAFGELSALVNNAGVGVMKPVHELTLEEWRLVLDTNLTGAFLGIRHAV 121

Query: 121 DTMKKTARKSGGEGRIINVSS-EGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANILH 179
             + +      G G I+NV S  G                   + G  AY+ SK    L 
Sbjct: 122 PALLRR-----GGGTIVNVGSLAGKN----------------PFKGGAAYNASKFG--LL 158

Query: 180 ANELARRLKEDGVDITANSVHPGAIATN 207
               A  L     ++   +V PG++ T 
Sbjct: 159 GLAGAAMLDLREANVRVVNVLPGSVDTG 186

>2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2 Length = 244

 Score = 99.2 bits (248), Expect = 2e-25
 Identities = 45/217 (20%), Positives = 77/217 (35%), Gaps = 31/217 (14%)

Query: 3   IVITGATSGIGTETARVLALRGVHVVMGVRDIAAG---KDVKETIVKEIPSA--KVDAME 57
           ++ITGA  GIG   A   A    H       +          E I  E  +     D + 
Sbjct: 5   LLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDTIT 64

Query: 58  LDLSSLASVRNFASEYNIQHHQLNILINNAGIMG-TPFM-LSKDNIELQFATNHLGHFLL 115
            D+S +A VR   +    ++  ++ L+NNAG+        L++++ +    TN  G F L
Sbjct: 65  ADISDMADVRRLTTHIVERYGHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTFFL 124

Query: 116 TNLLLDTMKKTARKSGGEGRIINVSS-EGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKL 174
           T  L   M++  + S   G I  ++S    +                 +     Y  SK 
Sbjct: 125 TQALFALMER--QHS---GHIFFITSVAATK----------------AFRHSSIYCMSKF 163

Query: 175 ANILHANELARRLKEDGVDITANSVHPGAIATNIIRH 211
                   +    ++    +    V PGA+ T +   
Sbjct: 164 GQRGLVETMRLYARKCN--VRITDVQPGAVYTPMWGK 198

>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A* Length = 281

 Score = 99.6 bits (249), Expect = 3e-25
 Identities = 41/218 (18%), Positives = 67/218 (30%), Gaps = 44/218 (20%)

Query: 4   VITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSL 63
           +ITG  SG+G          G  V +  +     +++               +  D+ SL
Sbjct: 9   LITGGASGLGRALVDRFVAEGARVAVLDKSAERLREL----EVAHG-GNAVGVVGDVRSL 63

Query: 64  ASVRNFASEYNIQHHQLNILINNAGIMGTP---FMLSKDNIELQF----ATNHLGHFLLT 116
              +  A        +++ LI NAGI         L +D I+  F      N  G+    
Sbjct: 64  QDQKRAAERCLAAFGKIDTLIPNAGIWDYSTALADLPEDKIDAAFDDIFHVNVKGYIHAV 123

Query: 117 NLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLAN 176
              L  +          G ++   S         G             G   Y+ +K A 
Sbjct: 124 KACLPALVS------SRGSVVFTISNA-------GFY--------PNGGGPLYTATKHAV 162

Query: 177 IL----HANELARRLKEDGVDITANSVHPGAIATNIIR 210
           +      A ELA         +  N V PG + T++  
Sbjct: 163 VGLVRQMAFELAPH-------VRVNGVAPGGMNTDLRG 193

>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis} Length = 256

 Score = 98.7 bits (247), Expect = 5e-25
 Identities = 50/209 (23%), Positives = 78/209 (37%), Gaps = 35/209 (16%)

Query: 4   VITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSL 63
           ++TGA +GIG   A   A  G  VV+        + V   I +     K   +E +++  
Sbjct: 16  IVTGAAAGIGRAIAGTFAKAGASVVVTDLKSEGAEAVAAAIRQA--GGKAIGLECNVTDE 73

Query: 64  ASVRNFASEYNIQHHQLNILINNAGI-MGTPFMLSKDNIELQFATNHLGHFLLTNLLLDT 122
                       Q  ++ +L+NNAG     PF +   + E  F  N    F L+ L    
Sbjct: 74  QHREAVIKAALDQFGKITVLVNNAGGGGPKPFDMPMSDFEWAFKLNLFSLFRLSQLAAPH 133

Query: 123 MKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANILH--- 179
           M+K      G G I+N+SS               +   +      +Y  SK A + H   
Sbjct: 134 MQKA-----GGGAILNISS---------------MAGENTNVRMASYGSSK-AAVNHLTR 172

Query: 180 --ANELARRLKEDGVDITANSVHPGAIAT 206
             A ++          I  N++ PGAI T
Sbjct: 173 NIAFDVGPM------GIRVNAIAPGAIKT 195

>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A Length = 259

 Score = 98.7 bits (247), Expect = 5e-25
 Identities = 47/210 (22%), Positives = 76/210 (36%), Gaps = 38/210 (18%)

Query: 4   VITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSL 63
           +ITG+  GIG   A      G  V +   DI   +        EI      A+++D++  
Sbjct: 12  LITGSARGIGRAFAEAYVREGATVAIADIDIERARQA----AAEI-GPAAYAVQMDVTRQ 66

Query: 64  ASVRNFASEYNIQHHQLNILINNAGIMG-TPFM-LSKDNIELQFATNHLGHFLLTNLLLD 121
            S+    +        L+IL+NNA +    P + +++++ E  FA N  G          
Sbjct: 67  DSIDAAIAATVEHAGGLDILVNNAALFDLAPIVEITRESYEKLFAINVAGTLFTLQAAAR 126

Query: 122 TMKKTARKSGGEGRIINVSS-EGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANIL-- 178
            M    R     G+IIN++S  G R                G      Y  +K A I   
Sbjct: 127 QMIAQGRG----GKIINMASQAGRR----------------GEALVAIYCATKAAVISLT 166

Query: 179 --HANELARRLKEDGVDITANSVHPGAIAT 206
                +L +        I  N++ PG +  
Sbjct: 167 QSAGLDLIKH------RINVNAIAPGVVDG 190

>3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A* Length = 248

 Score = 98.4 bits (246), Expect = 5e-25
 Identities = 44/209 (21%), Positives = 81/209 (38%), Gaps = 30/209 (14%)

Query: 1   MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDL 60
           M +++TGAT+G G    R    +G  V+   R     ++  + +  E+    +   +LD+
Sbjct: 1   MIVLVTGATAGFGECITRRFIQQGHKVIATGRR----QERLQELKDEL-GDNLYIAQLDV 55

Query: 61  SSLASVRNFASEYNIQHHQLNILINNAGI-MGTPFM--LSKDNIELQFATNHLGHFLLTN 117
            + A++    +    +   ++IL+NNAG+ +G       S ++ E    TN+ G   +T 
Sbjct: 56  RNRAAIEEMLASLPAEWCNIDILVNNAGLALGMEPAHKASVEDWETMIDTNNKGLVYMTR 115

Query: 118 LLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANI 177
            +L  M +        G IIN+ S      Y  G         + Y        +K    
Sbjct: 116 AVLPGMVER-----NHGHIINIGSTAGSWPYAGG---------NVYGA------TKAF-- 153

Query: 178 LHANELARRLKEDGVDITANSVHPGAIAT 206
           +    L  R    G  +    + PG +  
Sbjct: 154 VRQFSLNLRTDLHGTAVRVTDIEPGLVGG 182

>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus} Length = 272

 Score = 98.5 bits (246), Expect = 7e-25
 Identities = 46/216 (21%), Positives = 74/216 (34%), Gaps = 38/216 (17%)

Query: 4   VITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSL 63
           ++TGA SG+G   A  LA  G  V +  R + A ++       EI       +  D++  
Sbjct: 32  IVTGAGSGVGRAVAVALAGAGYGVALAGRRLDALQET----AAEIG-DDALCVPTDVTDP 86

Query: 64  ASVRNFASEYNIQHHQLNILINNAGIMGTPFML---SKDNIELQFATNHLGHFLLTNLLL 120
            SVR   +    +  ++++L NNAG       +   +    +    TN  G FL T    
Sbjct: 87  DSVRALFTATVEKFGRVDVLFNNAGTGAPAIPMEDLTFAQWKQVVDTNLTGPFLCTQEAF 146

Query: 121 DTMKKTARKSGGEGRIINVSS-EGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANIL- 178
             MK   ++  G GRIIN  S                            Y+ +K A    
Sbjct: 147 RVMKA--QEPRG-GRIINNGSISATS----------------PRPYSAPYTATKHAITGL 187

Query: 179 ---HANELARRLKEDGVDITANSVHPGAIATNIIRH 211
               + +          DI    +  G   T + + 
Sbjct: 188 TKSTSLDGRVH------DIACGQIDIGNADTPMAQK 217

>3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti} Length = 324

 Score = 99.4 bits (248), Expect = 7e-25
 Identities = 49/216 (22%), Positives = 79/216 (36%), Gaps = 36/216 (16%)

Query: 3   IVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSA---KVDAMELD 59
           I+ITGA+SG G  TA  LA  G  V   +RDI          +          +  +ELD
Sbjct: 8   ILITGASSGFGRLTAEALAGAGHRVYASMRDIVGRNASNVEAIAGFARDNDVDLRTLELD 67

Query: 60  LSSLASVRNFASEYNIQHHQLNILINNAGIMGTPFM--LSKDNIELQFATNHLGHFLLTN 117
           + S  SV     +   +  ++++LI+NAG M        + +     +  N L    +  
Sbjct: 68  VQSQVSVDRAIDQIIGEDGRIDVLIHNAGHMVFGPAEAFTPEQFAELYDINVLSTQRVNR 127

Query: 118 LLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANI 177
             L  M++  +K    G +I +SS                     Y     Y  +K    
Sbjct: 128 AALPHMRR--QKH---GLLIWISSSSSAGGT------------PPYLA--PYFAAK---- 164

Query: 178 LHANE-----LARRLKEDGVDITANSVHPGAIATNI 208
             A +      AR L   G++ +   + PGA  +  
Sbjct: 165 -AAMDAIAVQYARELSRWGIETSI--IVPGAFTSGT 197

>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A* Length = 260

 Score = 97.9 bits (245), Expect = 8e-25
 Identities = 49/212 (23%), Positives = 76/212 (35%), Gaps = 31/212 (14%)

Query: 4   VITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSL 63
           ++T +T GIG   AR LA  G HVV+  R          T+  E     V      +   
Sbjct: 18  LVTASTDGIGLAIARRLAQDGAHVVVSSRKQENVDRTVATLQGE--GLSVTGTVCHVGKA 75

Query: 64  ASVRNFASEYNIQHHQLNILINNAGIMGTPFM-----LSKDNIELQFATNHLGHFLLTNL 118
                  +     H  ++IL++NA +   PF       +++  +     N     L+T  
Sbjct: 76  EDRERLVAMAVNLHGGVDILVSNAAV--NPFFGNIIDATEEVWDKILHVNVKATVLMTKA 133

Query: 119 LLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANIL 178
           ++  M+K      G G ++ VSS G                   +     Y+ SK A + 
Sbjct: 134 VVPEMEKR-----GGGSVLIVSSVG-------AYH--------PFPNLGPYNVSKTALLG 173

Query: 179 HANELARRLKEDGVDITANSVHPGAIATNIIR 210
               LA  L      I  N + PG I TN  +
Sbjct: 174 LTKNLAVELAPRN--IRVNCLAPGLIKTNFSQ 203

>4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp} Length = 244

 Score = 97.6 bits (244), Expect = 8e-25
 Identities = 38/209 (18%), Positives = 69/209 (33%), Gaps = 39/209 (18%)

Query: 4   VITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSL 63
           ++TG + GIG     +L     H V+ +            I +   +  +  ++ DL+  
Sbjct: 8   LVTGGSKGIGKAVVELLLQNKNHTVINID-----------IQQSFSAENLKFIKADLTKQ 56

Query: 64  ASVRNFASEYNIQHHQLNILINNAGIMG-TPFM-LSKDNIELQFATNHLGHFLLTNLLLD 121
             + N      I++   + +  NAGI+       +  ++I+     N          L +
Sbjct: 57  QDITNVLDI--IKNVSFDGIFLNAGILIKGSIFDIDIESIKKVLDLNVWSSIYFIKGLEN 114

Query: 122 TMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANILHAN 181
            +K           I+   S                          AY+ SK A      
Sbjct: 115 NLKV-------GASIVFNGS---------------DQCFIAKPNSFAYTLSKGAIAQMTK 152

Query: 182 ELARRLKEDGVDITANSVHPGAIATNIIR 210
            LA  L +    I  N+V PG + T++ R
Sbjct: 153 SLALDLAKYQ--IRVNTVCPGTVDTDLYR 179

>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli} Length = 277

 Score = 98.4 bits (246), Expect = 9e-25
 Identities = 50/209 (23%), Positives = 84/209 (40%), Gaps = 29/209 (13%)

Query: 4   VITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSL 63
           ++TG  SGIG  TA + A  G +VV+   +  A   V      EI  +K   + +D+SS 
Sbjct: 31  IVTGGGSGIGRATAELFAKNGAYVVVADVNEDAAVRV----ANEIG-SKAFGVRVDVSSA 85

Query: 64  ASVRNFASEYNIQHHQLNILINNAGI--MGTPFMLSKDNIELQFATNHLGHFLLTNLLLD 121
               +   +   +  ++++L+NNAG    G    + ++  +   + N  G FL +  ++ 
Sbjct: 86  KDAESMVEKTTAKWGRVDVLVNNAGFGTTGNVVTIPEETWDRIMSVNVKGIFLCSKYVIP 145

Query: 122 TMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANILHAN 181
            M++      G G IIN +S                          AY  SK A      
Sbjct: 146 VMRRN-----GGGSIINTTSYT-------ATS--------AIADRTAYVASKGAISSLTR 185

Query: 182 ELARRLKEDGVDITANSVHPGAIATNIIR 210
            +A    ++G  I  N+V PG I +    
Sbjct: 186 AMAMDHAKEG--IRVNAVAPGTIDSPYFT 212

>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae} Length = 287

 Score = 98.5 bits (246), Expect = 9e-25
 Identities = 53/211 (25%), Positives = 95/211 (45%), Gaps = 28/211 (13%)

Query: 3   IVITGATSGIGTETARVLALRG---VHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELD 59
           ++ITGA++GIG  TA          + +++  R +   +++K+TI +E P+AKV   +LD
Sbjct: 36  VLITGASAGIGKATALEYLEASNGDMKLILAARRLEKLEELKKTIDQEFPNAKVHVAQLD 95

Query: 60  LSSLASVRNFASEYNIQHHQLNILINNAGI-MGTPFM--LSKDNIELQFATNHLGHFLLT 116
           ++    ++ F      +   ++IL+NNAG  +G+  +  ++ ++I+  F TN      +T
Sbjct: 96  ITQAEKIKPFIENLPQEFKDIDILVNNAGKALGSDRVGQIATEDIQDVFDTNVTALINIT 155

Query: 117 NLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLAN 176
             +L   +         G I+N+ S   R AY  G         S Y        SK A 
Sbjct: 156 QAVLPIFQAK-----NSGDIVNLGSIAGRDAYPTG---------SIYCA------SKFA- 194

Query: 177 ILHANELARRLKEDGVDITANSVHPGAIATN 207
            + A   + R +     I    + PG + T 
Sbjct: 195 -VGAFTDSLRKELINTKIRVILIAPGLVETE 224

>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum} Length = 258

 Score = 97.6 bits (244), Expect = 1e-24
 Identities = 48/212 (22%), Positives = 85/212 (40%), Gaps = 37/212 (17%)

Query: 4   VITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSA--KVDAMELDLS 61
           ++TG   GIG   +  LA  G  +   V D+   ++     +K I +A  K   + LD++
Sbjct: 6   MVTGGAQGIGRGISEKLAADGFDIA--VADLPQQEEQAAETIKLIEAADQKAVFVGLDVT 63

Query: 62  SLASVRNFASEYNIQHHQLNILINNAGIMG-TPFM-LSKDNIELQFATNHLGHFLLTNLL 119
             A+  +   E   +    ++L+NNAGI    P + +++++++  ++ N    F      
Sbjct: 64  DKANFDSAIDEAAEKLGGFDVLVNNAGIAQIKPLLEVTEEDLKQIYSVNVFSVFFGIQAA 123

Query: 120 LDTMKKTARKSGGEGRIINVSS-EGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANIL 178
                +   K    G+IIN +S    +                G+    AYS +K A   
Sbjct: 124 SRKFDELGVK----GKIINAASIAAIQ----------------GFPILSAYSTTKFAVRG 163

Query: 179 ----HANELARRLKEDGVDITANSVHPGAIAT 206
                A ELA +        T N+  PG + T
Sbjct: 164 LTQAAAQELAPK------GHTVNAYAPGIVGT 189

>2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2 Length = 246

 Score = 97.2 bits (243), Expect = 1e-24
 Identities = 46/206 (22%), Positives = 76/206 (36%), Gaps = 34/206 (16%)

Query: 3   IVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSS 62
           I++T A  GIG   A   A  G  V+    + +  +++++          +    LD++ 
Sbjct: 9   IILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELEKYP-------GIQTRVLDVTK 61

Query: 63  LASVRNFASEYNIQHHQLNILINNAGIM--GTPFMLSKDNIELQFATNHLGHFLLTNLLL 120
              +  FA+E      +L++L N AG +  GT     + + +     N    +L+    L
Sbjct: 62  KKQIDQFANEVE----RLDVLFNVAGFVHHGTVLDCEEKDWDFSMNLNVRSMYLMIKAFL 117

Query: 121 DTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANILHA 180
             M          G IIN+SS    +               G      YS +K A I   
Sbjct: 118 PKMLAQ-----KSGNIINMSSVASSVK--------------GVVNRCVYSTTKAAVIGLT 158

Query: 181 NELARRLKEDGVDITANSVHPGAIAT 206
             +A    + G  I  N V PG + T
Sbjct: 159 KSVAADFIQQG--IRCNCVCPGTVDT 182

>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans} Length = 281

 Score = 98.0 bits (245), Expect = 1e-24
 Identities = 39/216 (18%), Positives = 72/216 (33%), Gaps = 36/216 (16%)

Query: 4   VITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSA-KVDAMELDLSS 62
           ++TG  SGIG   A  L   G  V++  R+        + +     +   +     D+++
Sbjct: 15  LVTGGGSGIGKGVAAGLVAAGASVMIVGRNPDKLAGAVQELEALGANGGAIRYEPTDITN 74

Query: 63  LASVRNFASEYNIQHHQLNILINNAGIMGT--PFM-LSKDNIELQFATNHLGHFLLTNLL 119
                         H +L+ +++ AG      P   +  +        N  G   +    
Sbjct: 75  EDETARAVDAVTAWHGRLHGVVHCAGGSENIGPITQVDSEAWRRTVDLNVNGTMYVLKHA 134

Query: 120 LDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANILH 179
              M +     GG G  + +SS                     +  F AY  +K + + H
Sbjct: 135 AREMVR-----GGGGSFVGISSIA-------ASN--------THRWFGAYGVTK-SAVDH 173

Query: 180 -----ANELARRLKEDGVDITANSVHPGAIATNIIR 210
                A+EL          +  NS+ PG I T+++ 
Sbjct: 174 LMQLAADELGAS------WVRVNSIRPGLIRTDLVA 203

>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa} Length = 276

 Score = 97.6 bits (244), Expect = 1e-24
 Identities = 52/212 (24%), Positives = 72/212 (33%), Gaps = 34/212 (16%)

Query: 4   VITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSL 63
           ++TG + GIG   A+ L   G  V +  RD  A  D    +          A+  DLSS 
Sbjct: 33  LVTGGSRGIGQMIAQGLLEAGARVFICARDAEACADTATRLSAY---GDCQAIPADLSSE 89

Query: 64  ASVRNFASEYNIQHHQLNILINNAGIM-GTPFM-LSKDNIELQFATNHLGHFLLTNLLLD 121
           A  R  A        +L+IL+NNAG   G           E     N    F     LL 
Sbjct: 90  AGARRLAQALGELSARLDILVNNAGTSWGAALESYPVSGWEKVMQLNVTSVFSCIQQLLP 149

Query: 122 TMKKTARKSGGEGRIINVSS-EGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANILH- 179
            ++++A       R+IN+ S  G      +                 AY  SK A +   
Sbjct: 150 LLRRSASAENP-ARVINIGSVAGISAMGEQAY---------------AYGPSK-AALHQL 192

Query: 180 ----ANELARRLKEDGVDITANSVHPGAIATN 207
               A EL          I  N + PG   + 
Sbjct: 193 SRMLAKELVGE------HINVNVIAPGRFPSR 218

>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A* Length = 247

 Score = 96.8 bits (242), Expect = 2e-24
 Identities = 50/209 (23%), Positives = 79/209 (37%), Gaps = 31/209 (14%)

Query: 3   IVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSA--KVDAMELDL 60
            +ITGA+SGIG  TAR LA  G  V +  R      +    +  E+ +A  KV  +ELD+
Sbjct: 10  ALITGASSGIGEATARALAAEGAAVAIAARR----VEKLRALGDELTAAGAKVHVLELDV 65

Query: 61  SSLASVRNFASEYNIQHHQLNILINNAGIMGTPFM--LSKDNIELQFATNHLGHFLLTNL 118
           +    V    +        L+IL+NNAGIM    +      +      TN LG   +T  
Sbjct: 66  ADRQGVDAAVASTVEALGGLDILVNNAGIMLLGPVEDADTTDWTRMIDTNLLGLMYMTRA 125

Query: 119 LLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANIL 178
            L  + +       +G ++ +SS   R+                      Y  +K    +
Sbjct: 126 ALPHLLR------SKGTVVQMSSIAGRVNV------------RNAAV---YQATKFG--V 162

Query: 179 HANELARRLKEDGVDITANSVHPGAIATN 207
           +A     R +     +    + PG   T 
Sbjct: 163 NAFSETLRQEVTERGVRVVVIEPGTTDTE 191

>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2 Length = 256

 Score = 96.8 bits (242), Expect = 2e-24
 Identities = 50/210 (23%), Positives = 76/210 (36%), Gaps = 35/210 (16%)

Query: 4   VITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSL 63
           ++TGA  GIG   A  L   G  V +   + A  K V   I +        A+++D+S  
Sbjct: 6   LVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQA--GGHAVAVKVDVSDR 63

Query: 64  ASVRNFASEYNIQHHQLNILINNAGIMG-TPFM-LSKDNIELQFATNHLGHFLLTNLLLD 121
             V     +        ++++NNAG+   TP   ++ + ++  +  N  G        ++
Sbjct: 64  DQVFAAVEQARKTLGGFDVIVNNAGVAPSTPIESITPEIVDKVYNINVKGVIWGIQAAVE 123

Query: 122 TMKKTARKSGGEGRIINVSS-EGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANIL-- 178
             KK        G+IIN  S  GH                 G      YS SK A     
Sbjct: 124 AFKKEGHG----GKIINACSQAGHV----------------GNPELAVYSSSKFAVRGLT 163

Query: 179 --HANELARRLKEDGVDITANSVHPGAIAT 206
              A +LA         IT N   PG + T
Sbjct: 164 QTAARDLAPL------GITVNGYCPGIVKT 187

>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A* Length = 258

 Score = 96.5 bits (241), Expect = 3e-24
 Identities = 44/214 (20%), Positives = 76/214 (35%), Gaps = 36/214 (16%)

Query: 4   VITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSA--KVDAMELDLS 61
           +ITG++ GIG  TAR+ A  G  V +  R   A     +  +  + +          DL+
Sbjct: 11  LITGSSQGIGLATARLFARAGAKVGLHGRKAPAN---IDETIASMRADGGDAAFFAADLA 67

Query: 62  SLASVRNFASEYNIQHHQLNILINNAGIMG--TPFM-LSKDNIELQFATNHLGHFLLTNL 118
           +  + +    E+  +   +++LINNAG +    P   +     +     N     + T  
Sbjct: 68  TSEACQQLVDEFVAKFGGIDVLINNAGGLVGRKPLPEIDDTFYDAVMDANIRSVVMTTKF 127

Query: 119 LLDTMKKTARKSGGEGRIINVSS-EGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANI 177
            L  +   A+ SG    +I+  S  GH                 G  G   Y  +K A +
Sbjct: 128 ALPHLAAAAKASGQTSAVISTGSIAGHT---------------GGGPGAGLYGAAK-AFL 171

Query: 178 L-----HANELARRLKEDGVDITANSVHPGAIAT 206
                   +   +        +  N V PG + T
Sbjct: 172 HNVHKNWVDFHTKD------GVRFNIVSPGTVDT 199

>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} Length = 271

 Score = 96.8 bits (242), Expect = 3e-24
 Identities = 51/211 (24%), Positives = 79/211 (37%), Gaps = 31/211 (14%)

Query: 4   VITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSL 63
           +ITGA  GIG ET+RVLA  G  VV+                  +         +DL++ 
Sbjct: 15  IITGACGGIGLETSRVLARAGARVVLADLPETDLAGA----AASVG-RGAVHHVVDLTNE 69

Query: 64  ASVRNFASEYNIQHHQLNILINNAGIMGTPFML----SKDNIELQFATNHLGHFLLTNLL 119
            SVR           +L+I+ NNA       ML    + D  +  F  N  G  L+    
Sbjct: 70  VSVRALIDFTIDTFGRLDIVDNNAAHSDPADMLVTQMTVDVWDDTFTVNARGTMLMCKYA 129

Query: 120 LDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANILH 179
           +  +      +GG G I+N+SS                     Y+   AY+ +K A    
Sbjct: 130 IPRL----ISAGG-GAIVNISSAT-------AHA--------AYDMSTAYACTKAAIETL 169

Query: 180 ANELARRLKEDGVDITANSVHPGAIATNIIR 210
              +A +    G  +  N++ PG + T  + 
Sbjct: 170 TRYVATQYGRHG--VRCNAIAPGLVRTPRLE 198

>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A* Length = 244

 Score = 96.0 bits (240), Expect = 4e-24
 Identities = 43/213 (20%), Positives = 75/213 (35%), Gaps = 45/213 (21%)

Query: 4   VITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSL 63
           ++TGA  GIG  T + L   G  VV   R  A    +            ++ + +DL   
Sbjct: 11  LVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVREC------PGIEPVCVDLGDW 64

Query: 64  ASVRNFASEYNIQHHQLNILINNAGIM-GTPFM-LSKDNIELQFATNHLGHFLLTNLLLD 121
            +              +++L+NNA +    PF+ ++K+  +  F  N      ++ ++  
Sbjct: 65  EATERALGSV----GPVDLLVNNAAVALLQPFLEVTKEAFDRSFEVNLRAVIQVSQIVAR 120

Query: 122 TMKKTARKSGGEGRIINVSS-EGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANILH- 179
            +       G  G I+NVSS    R                       Y  +K A +   
Sbjct: 121 GL----IARGVPGAIVNVSSQCSQR----------------AVTNHSVYCSTKGA-LDML 159

Query: 180 ----ANELARRLKEDGVDITANSVHPGAIATNI 208
               A EL          I  N+V+P  + T++
Sbjct: 160 TKVMALELGPH------KIRVNAVNPTVVMTSM 186

>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str} Length = 255

 Score = 96.1 bits (240), Expect = 4e-24
 Identities = 55/218 (25%), Positives = 81/218 (37%), Gaps = 47/218 (21%)

Query: 4   VITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSA--KVDAMELDLS 61
           ++TGA+ GIG   A+ LA  G  V +        K+  E  V EI S      ++  +L 
Sbjct: 11  LVTGASRGIGRAIAKRLANDGALVAI---HYGNRKEEAEETVYEIQSNGGSAFSIGANLE 67

Query: 62  SLASVRNFASE------YNIQHHQLNILINNAGIMG-TPFM-LSKDNIELQFATNHLGHF 113
           SL  V    S             + +ILINNAGI         ++   +   + N    F
Sbjct: 68  SLHGVEALYSSLDNELQNRTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPF 127

Query: 114 LLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSK 173
            +    L  ++          RIIN+SS   R+                   F AYS +K
Sbjct: 128 FIIQQALSRLRD-------NSRIINISSAATRI---------------SLPDFIAYSMTK 165

Query: 174 -----LANILHANELARRLKEDGVDITANSVHPGAIAT 206
                +   L A +L  R       IT N++ PG + T
Sbjct: 166 GAINTMTFTL-AKQLGAR------GITVNAILPGFVKT 196

>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2 Length = 244

 Score = 95.6 bits (239), Expect = 5e-24
 Identities = 46/213 (21%), Positives = 82/213 (38%), Gaps = 45/213 (21%)

Query: 4   VITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSL 63
           ++TGA  GIG +T + L   G  VV   R  +    + +          ++ + +DL   
Sbjct: 11  LVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKEC------PGIEPVCVDLGDW 64

Query: 64  ASVRNFASEYNIQHHQLNILINNAGI-MGTPFM-LSKDNIELQFATNHLGHFLLTNLLLD 121
            +              +++L+NNA + +  PF+ ++K+  +  F+ N    F ++ ++  
Sbjct: 65  DATEKALGGI----GPVDLLVNNAALVIMQPFLEVTKEAFDRSFSVNLRSVFQVSQMVAR 120

Query: 122 TMKKTARKSGGEGRIINVSS-EGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANILH- 179
            M       G  G I+NVSS   H                  +     YS +K A +   
Sbjct: 121 DM----INRGVPGSIVNVSSMVAHV----------------TFPNLITYSSTKGA-MTML 159

Query: 180 ----ANELARRLKEDGVDITANSVHPGAIATNI 208
               A EL          I  NSV+P  + T++
Sbjct: 160 TKAMAMELGPH------KIRVNSVNPTVVLTDM 186

>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum} Length = 251

 Score = 95.4 bits (238), Expect = 6e-24
 Identities = 24/211 (11%), Positives = 59/211 (27%), Gaps = 39/211 (18%)

Query: 3   IVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSS 62
           I++ G +  +G E  +    +  + +          D               +  +  S 
Sbjct: 25  ILVLGGSGALGAEVVKFFKSKSWNTISIDFRENPNADH--------------SFTIKDSG 70

Query: 63  LASVRNFASEYNIQHHQLNILINNAGI--MGTPFM-LSKDNIELQFATNHLGHFLLTNLL 119
              +++   + N +  +++  +  AG    G         +++     N    F   ++ 
Sbjct: 71  EEEIKSVIEKINSKSIKVDTFVCAAGGWSGGNASSDEFLKSVKGMIDMNLYSAFASAHIG 130

Query: 120 LDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANILH 179
              + +        G  +   +          +           +G  AY  +K A    
Sbjct: 131 AKLLNQG-------GLFVLTGASA-------ALN--------RTSGMIAYGATKAATHHI 168

Query: 180 ANELARRLKEDGVDITANSVHPGAIATNIIR 210
             +LA          T+  + P  + T   R
Sbjct: 169 IKDLASENGGLPAGSTSLGILPVTLDTPTNR 199

>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2 Length = 262

 Score = 95.7 bits (239), Expect = 7e-24
 Identities = 46/210 (21%), Positives = 77/210 (36%), Gaps = 35/210 (16%)

Query: 4   VITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSL 63
           ++TGA   IG  TA  LA  G  + +   +  A +  + ++ ++    +  +   D++S 
Sbjct: 11  LVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREK--GVEARSYVCDVTSE 68

Query: 64  ASVRNFASEYNIQHHQLNILINNAGIMG--TPFM-LSKDNIELQFATNHLGHFLLTNLLL 120
            +V            +++ L NNAG  G   P      D+       N  G F +   + 
Sbjct: 69  EAVIGTVDSVVRDFGKIDFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVLKAVS 128

Query: 121 DTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANIL-- 178
             M          GRI+N +S         G++        G     AY  SK A I   
Sbjct: 129 RQMITQ-----NYGRIVNTASMA-------GVK--------GPPNMAAYGTSKGAIIALT 168

Query: 179 --HANELARRLKEDGVDITANSVHPGAIAT 206
              A +LA        +I  N++ PG +  
Sbjct: 169 ETAALDLAPY------NIRVNAISPGYMGP 192

>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium} Length = 269

 Score = 95.7 bits (239), Expect = 7e-24
 Identities = 47/214 (21%), Positives = 78/214 (36%), Gaps = 45/214 (21%)

Query: 4   VITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSL 63
           ++TG +SGIG      L   G  VV    D  +  +V             D  ++D+++ 
Sbjct: 18  IVTGGSSGIGLAVVDALVRYGAKVVSVSLDEKSDVNV------------SDHFKIDVTNE 65

Query: 64  ASVRNFASEYNIQHHQLNILINNAGIMG-TPFM-LSKDNIELQFATNHLGHFLLTNLLLD 121
             V+    +   ++ +++IL+NNAGI   +P      +        N  G +L+    + 
Sbjct: 66  EEVKEAVEKTTKKYGRIDILVNNAGIEQYSPLHLTPTEIWRRIIDVNVNGSYLMAKYTIP 125

Query: 122 TMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANILH-- 179
            M        G G IIN++S                          AY  SK A +    
Sbjct: 126 VMLAI-----GHGSIINIASVQ-------SYA--------ATKNAAAYVTSKHALLGLTR 165

Query: 180 --ANELARRLKEDGVDITANSVHPGAIATNIIRH 211
             A + A +       I  N+V PG I T ++  
Sbjct: 166 SVAIDYAPK-------IRCNAVCPGTIMTPMVIK 192

>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis} Length = 277

 Score = 96.1 bits (240), Expect = 7e-24
 Identities = 50/210 (23%), Positives = 80/210 (38%), Gaps = 29/210 (13%)

Query: 4   VITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSL 63
           ++TGA +GIG   AR LA  G HV+    D  A          +I      A  +D+S  
Sbjct: 33  IVTGAGAGIGLAVARRLADEGCHVLCADIDGDAADAA----ATKIG-CGAAACRVDVSDE 87

Query: 64  ASVRNFASEYNIQHHQLNILINNAGIMG-TPFM-LSKDNIELQFATNHLGHFLLTNLLLD 121
             +             ++ L+ NAG++     +  + ++ +   A N  G +L T     
Sbjct: 88  QQIIAMVDACVAAFGGVDKLVANAGVVHLASLIDTTVEDFDRVIAINLRGAWLCTKHAAP 147

Query: 122 TMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANILHAN 181
            M     + GG G I+N+SS         G             G  AY  SK   I  + 
Sbjct: 148 RM----IERGG-GAIVNLSSLA-------GQV--------AVGGTGAYGMSKAGIIQLSR 187

Query: 182 ELARRLKEDGVDITANSVHPGAIATNIIRH 211
             A  L+  G  I +N++ P  + T + + 
Sbjct: 188 ITAAELRSSG--IRSNTLLPAFVDTPMQQT 215

>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2 Length = 256

 Score = 95.2 bits (238), Expect = 8e-24
 Identities = 46/209 (22%), Positives = 70/209 (33%), Gaps = 32/209 (15%)

Query: 4   VITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSL 63
           ++TG   GIG   A+  A  G  V +        +  +               ++DL   
Sbjct: 10  LVTGGARGIGRAIAQAFAREGALVALCDLRPEGKEVAEA--------IGGAFFQVDLEDE 61

Query: 64  ASVRNFASEYNIQHHQLNILINNAGIMG-TPFM-LSKDNIELQFATNHLGHFLLTNLLLD 121
                F  E      ++++L+NNA I      + +           N      L+ L   
Sbjct: 62  RERVRFVEEAAYALGRVDVLVNNAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLSALAAR 121

Query: 122 TMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANILHAN 181
            M+K      G G I+NV+S         G+               AY+ SK   +    
Sbjct: 122 EMRKV-----GGGAIVNVASVQ-------GLF--------AEQENAAYNASKGGLVNLTR 161

Query: 182 ELARRLKEDGVDITANSVHPGAIATNIIR 210
            LA  L      I  N+V PGAIAT  + 
Sbjct: 162 SLALDLAPLR--IRVNAVAPGAIATEAVL 188

>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa} Length = 272

 Score = 95.4 bits (238), Expect = 1e-23
 Identities = 50/209 (23%), Positives = 78/209 (37%), Gaps = 29/209 (13%)

Query: 3   IVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEI-PSAKVDAMELDLS 61
           + ITGATSG G   AR  A  G  +V+  R     ++  + +  E+    +V  + LD+ 
Sbjct: 24  LFITGATSGFGEACARRFAEAGWSLVLTGRR----EERLQALAGELSAKTRVLPLTLDVR 79

Query: 62  SLASVRNFASEYNIQHHQLNILINNAGIM-GTPFM--LSKDNIELQFATNHLGHFLLTNL 118
             A++         +   L  LINNAG+  GT        D+ +    TN  G    T L
Sbjct: 80  DRAAMSAAVDNLPEEFATLRGLINNAGLALGTDPAQSCDLDDWDTMVDTNIKGLLYSTRL 139

Query: 119 LLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANIL 178
           LL  +   A  +G    I+N+ S   +  Y              Y G      +K    +
Sbjct: 140 LLPRLI--AHGAGAS--IVNLGSVAGKWPYPGS---------HVYGG------TKAF--V 178

Query: 179 HANELARRLKEDGVDITANSVHPGAIATN 207
               L  R    G  +   ++ PG   + 
Sbjct: 179 EQFSLNLRCDLQGTGVRVTNLEPGLCESE 207

>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile} Length = 285

 Score = 95.4 bits (238), Expect = 1e-23
 Identities = 41/212 (19%), Positives = 77/212 (36%), Gaps = 29/212 (13%)

Query: 3   IVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETI---VKEIPSA--KVDAME 57
           + I+G + GIG   A+ +A  G +V +  +       +  TI    KEI  A  +   + 
Sbjct: 12  MFISGGSRGIGLAIAKRVAADGANVALVAKSAEPHPKLPGTIYTAAKEIEEAGGQALPIV 71

Query: 58  LDLSSLASVRNFASEYNIQHHQLNILINNAGIMG-TPFM-LSKDNIELQFATNHLGHFLL 115
            D+    +V    ++   Q   ++I +NNA  +       +     +L       G + +
Sbjct: 72  GDIRDGDAVAAAVAKTVEQFGGIDICVNNASAINLGSIEEVPLKRFDLMNGIQVRGTYAV 131

Query: 116 TNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLA 175
           +   +  MK           I+ +S                I     +     Y  +K  
Sbjct: 132 SQSCIPHMKG-----RDNPHILTLSP--------------PIRLEPKWLRPTPYMMAKYG 172

Query: 176 NILHANELARRLKEDGVDITANSVHPG-AIAT 206
             L A  +A  L++ G  I +N++ P   +AT
Sbjct: 173 MTLCALGIAEELRDAG--IASNTLWPRTTVAT 202

>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti} Length = 281

 Score = 95.4 bits (238), Expect = 1e-23
 Identities = 53/220 (24%), Positives = 82/220 (37%), Gaps = 46/220 (20%)

Query: 4   VITGATSGIGTETARVLALRGVHVVM-GVRDIAAGKDVKETIVKEIPSAKVDAMELDLSS 62
           VITG+TSGIG   AR LA  G ++V+ G       + V + +     S  V     D++ 
Sbjct: 29  VITGSTSGIGLAIARTLAKAGANIVLNGFGAPDEIRTVTDEVAGL-SSGTVLHHPADMTK 87

Query: 63  LASVRNFASEYNIQHHQLNILINNAGIMG-TPFM-LSKDNIELQFATNHLGHFLLTNLLL 120
            + + +  +    +    +IL+NNAG+           +  +   A N    F      +
Sbjct: 88  PSEIADMMAMVADRFGGADILVNNAGVQFVEKIEDFPVEQWDRIIAVNLSSSFHTIRGAI 147

Query: 121 DTMKKTARKSGGEGRIINVSS-EGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANILH 179
             MKK      G GRIIN++S  G                        AY  +K     H
Sbjct: 148 PPMKK-----KGWGRIINIASAHGLV----------------ASPFKSAYVAAK-----H 181

Query: 180 ---------ANELARRLKEDGVDITANSVHPGAIATNIIR 210
                    A E+A         +T NS+ PG + T ++ 
Sbjct: 182 GIMGLTKTVALEVAES------GVTVNSICPGYVLTPLVE 215

>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti} Length = 267

 Score = 94.9 bits (237), Expect = 2e-23
 Identities = 55/212 (25%), Positives = 84/212 (39%), Gaps = 41/212 (19%)

Query: 4   VITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSA--KVDAMELDLS 61
           ++TGA+ GIG   A  LA  G  VV+     A      E +  +I +A  K    + D+S
Sbjct: 31  IVTGASRGIGAAIAARLASDGFTVVINY---AGKAAAAEEVAGKIEAAGGKALTAQADVS 87

Query: 62  SLASVRNFASEYNIQHHQLNILINNAGIMG-TPFM-LSKDNIELQFATNHLGHFLLTNLL 119
             A+VR   +        +++L+NNAGIM  T          +   A N  G F      
Sbjct: 88  DPAAVRRLFATAEEAFGGVDVLVNNAGIMPLTTIAETGDAVFDRVIAVNLKGTFNTLREA 147

Query: 120 LDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSK-----L 174
              ++         GRIIN+S+                     +  +  Y+ +K     +
Sbjct: 148 AQRLRVG-------GRIINMST---------------SQVGLLHPSYGIYAAAKAGVEAM 185

Query: 175 ANILHANELARRLKEDGVDITANSVHPGAIAT 206
            ++L + EL  R      DIT N+V PG  AT
Sbjct: 186 THVL-SKELRGR------DITVNAVAPGPTAT 210

>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti} Length = 281

 Score = 95.0 bits (237), Expect = 2e-23
 Identities = 45/217 (20%), Positives = 70/217 (32%), Gaps = 36/217 (16%)

Query: 4   VITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSL 63
           ++TG  +G+G   A+ L+  G  VV+  R           I        V A+  D+   
Sbjct: 37  LVTGGGTGVGRGIAQALSAEGYSVVITGRRPDVLDAAAGEIGGRTG-NIVRAVVCDVGDP 95

Query: 64  ASVRNFASEYNIQHHQLNILINNAGIMG--TPFM-LSKDNIELQFATNHLGHFLLTNLLL 120
             V    +    +  +L++L+NNAG      P   ++ +      A N  G FL T    
Sbjct: 96  DQVAALFAAVRAEFARLDLLVNNAGSNVPPVPLEEVTFEQWNGIVAANLTGAFLCTQHAF 155

Query: 121 DTMKKTARKSGGEGRIINVSS-EGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANILH 179
             MK    +    GRIIN  S                            Y+ +K   I  
Sbjct: 156 RMMKAQTPRG---GRIINNGSISAQT----------------PRPNSAPYTATK-HAITG 195

Query: 180 -----ANELARRLKEDGVDITANSVHPGAIATNIIRH 211
                A +          DI    +  G  AT++   
Sbjct: 196 LTKSTALDGRMH------DIACGQIDIGNAATDMTAR 226

>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV} Length = 260

 Score = 94.2 bits (235), Expect = 2e-23
 Identities = 38/211 (18%), Positives = 62/211 (29%), Gaps = 39/211 (18%)

Query: 3   IVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSS 62
           I+ITGA+  +G   A  L   G  V++  R   A        V E+  A   A+  D S 
Sbjct: 30  ILITGASQRVGLHCALRLLEHGHRVIISYRTEHAS-------VTELRQAGAVALYGDFSC 82

Query: 63  LASVRNFASEYNIQHHQLNILINNAGIMG-TPFMLSKDNIELQFATNHLGHFLLTNLLLD 121
              +  F      Q   L  +++NA            DN    F+ + L  +L+      
Sbjct: 83  ETGIMAFIDLLKTQTSSLRAVVHNASEWLAETPGEEADNFTRMFSVHMLAPYLINLHCEP 142

Query: 122 TMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANI---- 177
            +            I+++S                     G +   AY  +K        
Sbjct: 143 LLTA-----SEVADIVHISD---------------DVTRKGSSKHIAYCATKAGLESLTL 182

Query: 178 LHANELARRLKEDGVDITANSVHPGAIATNI 208
             A   A         +  N + P  +    
Sbjct: 183 SFAARFAPL-------VKVNGIAPALLMFQP 206

>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti} Length = 271

 Score = 94.5 bits (236), Expect = 2e-23
 Identities = 53/212 (25%), Positives = 76/212 (35%), Gaps = 40/212 (18%)

Query: 4   VITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSA--KVDAMELDLS 61
            +TG + GIG   A+ LAL G  V +         +  + +V EI  A  +  A+  D  
Sbjct: 35  FVTGGSRGIGAAIAKRLALEGAAVAL---TYVNAAERAQAVVSEIEQAGGRAVAIRADNR 91

Query: 62  SLASVRNFASEYNIQHHQLNILINNAGIMG-TPFM-LSKDNIELQFATNHLGHFLLTNLL 119
              ++     E       L+IL+N+AGI    P    +  + +   A N    F+     
Sbjct: 92  DAEAIEQAIRETVEALGGLDILVNSAGIWHSAPLEETTVADFDEVMAVNFRAPFVAIRSA 151

Query: 120 LDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSK-----L 174
              +          GRII + S    L                + G   YS SK     L
Sbjct: 152 SRHLGD-------GGRIITIGSNLAELV--------------PWPGISLYSASKAALAGL 190

Query: 175 ANILHANELARRLKEDGVDITANSVHPGAIAT 206
              L A +L  R       IT N VHPG+  T
Sbjct: 191 TKGL-ARDLGPR------GITVNIVHPGSTDT 215

>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A Length = 264

 Score = 94.2 bits (235), Expect = 2e-23
 Identities = 43/213 (20%), Positives = 73/213 (34%), Gaps = 46/213 (21%)

Query: 4   VITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSL 63
           ++TGA+ GIG   A      G  V+                      AK D +E D+++ 
Sbjct: 12  IVTGASMGIGRAIAERFVDEGSKVIDLSIHDPGE-------------AKYDHIECDVTNP 58

Query: 64  ASVRNFASEYNIQHHQLNILINNAGIMG-TPFM-LSKDNIELQFATNHLGHFLLTNLLLD 121
             V+        ++  +++L+NNAGI        +S          N  G++  +   + 
Sbjct: 59  DQVKASIDHIFKEYGSISVLVNNAGIESYGKIESMSMGEWRRIIDVNLFGYYYASKFAIP 118

Query: 122 TMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANILH-- 179
            M ++      +  I+N+SS                          AY  SK A I    
Sbjct: 119 YMIRS-----RDPSIVNISSVQ-------ASI--------ITKNASAYVTSKHAVIGLTK 158

Query: 180 --ANELARRLKEDGVDITANSVHPGAIATNIIR 210
             A + A         +  N+V P  I T ++R
Sbjct: 159 SIALDYAPL-------LRCNAVCPATIDTPLVR 184

>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A* Length = 278

 Score = 94.5 bits (236), Expect = 3e-23
 Identities = 48/215 (22%), Positives = 77/215 (35%), Gaps = 36/215 (16%)

Query: 4   VITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEI-PSAKVDAMELDLSS 62
           +ITG   GIG  TA++    G  VV+       G+ V       I     +  +  D++ 
Sbjct: 20  IITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKV----CNNIGSPDVISFVHCDVTK 75

Query: 63  LASVRNFASEYNIQHH-QLNILINNAGIMGTPFM----LSKDNIELQFATNHLGHFLLTN 117
              VRN   +  I  H +L+I+  N G++ T          ++ +     N  G FL   
Sbjct: 76  DEDVRN-LVDTTIAKHGKLDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFL--- 131

Query: 118 LLLDTMKKTAR--KSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLA 175
                 K  AR      +G I+  +S                   +G      Y+ +K A
Sbjct: 132 ----VAKHAARVMIPAKKGSIVFTASIS-------SFT-------AGEGVSHVYTATKHA 173

Query: 176 NILHANELARRLKEDGVDITANSVHPGAIATNIIR 210
            +     L   L E G  I  N V P  +A+ ++ 
Sbjct: 174 VLGLTTSLCTELGEYG--IRVNCVSPYIVASPLLT 206

>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens} Length = 260

 Score = 93.8 bits (234), Expect = 3e-23
 Identities = 46/215 (21%), Positives = 75/215 (34%), Gaps = 39/215 (18%)

Query: 4   VITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSA--KVDAMELDLS 61
           V+TGA+ GIG   A  L   G  V +  R +   + V     +E  S   +   +  D S
Sbjct: 9   VVTGASRGIGRGIALQLCKAGATVYITGRHLDTLRVV----AQEAQSLGGQCVPVVCDSS 64

Query: 62  SLASVRNFASEYNIQHH-QLNILINNAGIM--------GTPFM-LSKDNIELQFATNHLG 111
             + VR+   + + +   +L++L+NNA              F        +        G
Sbjct: 65  QESEVRSLFEQVDREQQGRLDVLVNNAYAGVQTILNTRNKAFWETPASMWDDINNVGLRG 124

Query: 112 HFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQ 171
           H+  +      M        G+G I+ +SS G                   Y     Y  
Sbjct: 125 HYFCSVYGARLMVP-----AGQGLIVVISSPGSL----------------QYMFNVPYGV 163

Query: 172 SKLANILHANELARRLKEDGVDITANSVHPGAIAT 206
            K A    A + A  L+  G  ++  S+ PG + T
Sbjct: 164 GKAACDKLAADCAHELRRHG--VSCVSLWPGIVQT 196

>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli} Length = 272

 Score = 94.2 bits (235), Expect = 3e-23
 Identities = 55/214 (25%), Positives = 87/214 (40%), Gaps = 34/214 (15%)

Query: 4   VITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSA--KVDAMELDLS 61
           ++TG + GIG    R+ A +G  V +     AA ++  + +V  I  +  +  A+  D+ 
Sbjct: 30  LVTGGSRGIGAAVCRLAARQGWRVGVN---YAANREAADAVVAAITESGGEAVAIPGDVG 86

Query: 62  SLASVRNFASEYNIQHHQLNILINNAGIMG--TPFM-LSKDNIELQFATNHLGHFLLTNL 118
           + A +    S  + Q  +L+ L+NNAGI+        +S + IE     N  G  L    
Sbjct: 87  NAADIAAMFSAVDRQFGRLDGLVNNAGIVDYPQRVDEMSVERIERMLRVNVTGSILCAAE 146

Query: 119 LLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANIL 178
            +  M +    SG  G I+NVSS    L                   +  Y+ SK A   
Sbjct: 147 AVRRMSR--LYSGQGGAIVNVSSMAAILG--------------SATQYVDYAASKAAIDT 190

Query: 179 H----ANELARRLKEDGVDITANSVHPGAIATNI 208
                A E+A         I  N+V PG I T++
Sbjct: 191 FTIGLAREVAAE------GIRVNAVRPGIIETDL 218

>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens} Length = 346

 Score = 94.9 bits (236), Expect = 4e-23
 Identities = 44/217 (20%), Positives = 83/217 (38%), Gaps = 29/217 (13%)

Query: 3   IVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETI---VKEIPSA--KVDAME 57
           + ITGA+ GIG   A   A  G ++V+  +       +  TI    +EI +   K     
Sbjct: 48  VFITGASRGIGKAIALKAAKDGANIVIAAKTAQPHPKLLGTIYTAAEEIEAVGGKALPCI 107

Query: 58  LDLSSLASVRNFASEYNIQHHQLNILINNAGIMG-TPFM-LSKDNIELQFATNHLGHFLL 115
           +D+     +     +   +   ++IL+NNA  +  T  +      ++L    N  G +L 
Sbjct: 108 VDVRDEQQISAAVEKAIKKFGGIDILVNNASAISLTNTLDTPTKRLDLMMNVNTRGTYLA 167

Query: 116 TNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLA 175
           +   +  +KK          I+N+S   +              +P  +    AY+ +K  
Sbjct: 168 SKACIPYLKK-----SKVAHILNISPPLNL-------------NPVWFKQHCAYTIAKYG 209

Query: 176 NILHANELARRLKEDGVDITANSVHPG-AIATNIIRH 211
             ++   +A   K    +I  N++ P  AI T  +  
Sbjct: 210 MSMYVLGMAEEFKG---EIAVNALWPKTAIHTAAMDM 243

>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV} Length = 274

 Score = 93.4 bits (233), Expect = 5e-23
 Identities = 42/212 (19%), Positives = 76/212 (35%), Gaps = 28/212 (13%)

Query: 3   IVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETI---VKEIPSA--KVDAME 57
           + ITGA+ GIG   A   A  G +V +  +   A   +  TI      + +A  +  A++
Sbjct: 9   LFITGASRGIGLAIALRAARDGANVAIAAKSAVANPKLPGTIHSAAAAVNAAGGQGLALK 68

Query: 58  LDLSSLASVRNFASEYNIQHHQLNILINNAGIMG-TPFM-LSKDNIELQFATNHLGHFLL 115
            D+     VR   +        ++IL+NNA  +     +       +L    N  G F+ 
Sbjct: 69  CDIREEDQVRAAVAATVDTFGGIDILVNNASAIWLRGTLDTPMKRFDLMQQVNARGSFVC 128

Query: 116 TNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLA 175
               L  + +          I+ ++                  +P+ +     Y+ +K+ 
Sbjct: 129 AQACLPHLLQ-----APNPHILTLAPPP-------------SLNPAWWGAHTGYTLAKMG 170

Query: 176 NILHANELARRLKEDGVDITANSVHPG-AIAT 206
             L    LA      G  +  N++ P   IAT
Sbjct: 171 MSLVTLGLAAEFGPQG--VAINALWPRTVIAT 200

>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A* Length = 257

 Score = 92.8 bits (231), Expect = 6e-23
 Identities = 44/226 (19%), Positives = 80/226 (35%), Gaps = 53/226 (23%)

Query: 3   IVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSS 62
           IVI+G  +GIG  T +VL   G  +V        G D+++        A+V A   DLS+
Sbjct: 4   IVISGCATGIGAATRKVLEAAGHQIV--------GIDIRD--------AEVIA---DLST 44

Query: 63  LASVRNFASEYNIQHH-QLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLD 121
               +   ++   +    ++ L+  AG+           +    + N+ G   L +  L 
Sbjct: 45  AEGRKQAIADVLAKCSKGMDGLVLCAGLGPQT-----KVLGNVVSVNYFGATELMDAFLP 99

Query: 122 TMKKTARKSGGEGRIINVSS-------EGHRLAYHEGIRFDKINDPS------GYNGFRA 168
            +KK     G +   + +SS                    ++    +         G  A
Sbjct: 100 ALKK-----GHQPAAVVISSVASAHLAFDKNPLALALEAGEEAKARAIVEHAGEQGGNLA 154

Query: 169 YSQSKLANIL----HANELARRLKEDGVDITANSVHPGAIATNIIR 210
           Y+ SK A  +     A             +  N++ PGA  T +++
Sbjct: 155 YAGSKNALTVAVRKRAAAWGEA------GVRLNTIAPGATETPLLQ 194

>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2 Length = 273

 Score = 93.0 bits (232), Expect = 7e-23
 Identities = 49/210 (23%), Positives = 76/210 (36%), Gaps = 35/210 (16%)

Query: 4   VITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSL 63
           ++TG + GIG      LA  G  V    R+     +  E   ++     V+    DL S 
Sbjct: 25  LVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREK--GLNVEGSVCDLLSR 82

Query: 64  ASVRN-FASEYNIQHHQLNILINNAGI-MGTPFM-LSKDNIELQFATNHLGHFLLTNLLL 120
                   +  ++   +LNIL+NNAG+ +       ++ +  +   TN    + L+ +  
Sbjct: 83  TERDKLMQTVAHVFDGKLNILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAYHLSQIAY 142

Query: 121 DTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANIL-- 178
             +K         G +I +SS               I   S       YS SK A     
Sbjct: 143 PLLKA-----SQNGNVIFLSS---------------IAGFSALPSVSLYSASKGAINQMT 182

Query: 179 --HANELARRLKEDGVDITANSVHPGAIAT 206
              A E A+       +I  NSV PG I T
Sbjct: 183 KSLACEWAKD------NIRVNSVAPGVILT 206

>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans} Length = 260

 Score = 92.6 bits (231), Expect = 8e-23
 Identities = 49/215 (22%), Positives = 79/215 (36%), Gaps = 35/215 (16%)

Query: 4   VITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSL 63
           ++TG    IG      LA  G  V++   D A      E +  E     V ++ +D+++ 
Sbjct: 17  IVTGGAQNIGLACVTALAEAGARVIIADLDEAMATKAVEDLRME--GHDVSSVVMDVTNT 74

Query: 64  ASVRNFASEYNIQHHQLNILINNAGIM--GTPFM-LSKDNIELQFATNHLGHFLLTNLLL 120
            SV+N     + Q  +++IL+  AGI         ++      Q   N  G F     + 
Sbjct: 75  ESVQNAVRSVHEQEGRVDILVACAGICISEVKAEDMTDGQWLKQVDINLNGMFRSCQAVG 134

Query: 121 DTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANILH- 179
             M +       +G I+ + S    ++          N P       AY+ SK A +   
Sbjct: 135 RIMLE-----QKQGVIVAIGS----MSGLIV------NRPQQQ---AAYNASK-AGVHQY 175

Query: 180 ----ANELARRLKEDGVDITANSVHPGAIATNIIR 210
               A E A         I AN+V P  I T + R
Sbjct: 176 IRSLAAEWAPH------GIRANAVAPTYIETTLTR 204

>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2 Length = 274

 Score = 92.7 bits (231), Expect = 1e-22
 Identities = 43/212 (20%), Positives = 77/212 (36%), Gaps = 40/212 (18%)

Query: 4   VITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSA--KVDAMELDLS 61
           + TGA  GIG   A  L  RG  VV+      +     E +V E+     +  A++ D+S
Sbjct: 25  LTTGAGRGIGRGIAIELGRRGASVVVNY---GSSSKAAEEVVAELKKLGAQGVAIQADIS 81

Query: 62  SLASVRNFASEYNIQHHQLNILINNAGIMG-TPFM-LSKDNIELQFATNHLGHFLLTNLL 119
             + V     +       L+ +++N+G+      + ++++  +  F  N  G F +    
Sbjct: 82  KPSEVVALFDKAVSHFGGLDFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVAQQG 141

Query: 120 LDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSK-----L 174
           L   ++        GRII  SS    +              +G      Y+ SK      
Sbjct: 142 LKHCRRG-------GRIILTSSIAAVM--------------TGIPNHALYAGSKAAVEGF 180

Query: 175 ANILHANELARRLKEDGVDITANSVHPGAIAT 206
                A +   +       +T N + PG + T
Sbjct: 181 CRAF-AVDCGAK------GVTVNCIAPGGVKT 205

>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A* Length = 258

 Score = 92.2 bits (230), Expect = 1e-22
 Identities = 46/215 (21%), Positives = 82/215 (38%), Gaps = 35/215 (16%)

Query: 4   VITGATSGIGTETARVLALRGVHVVMG-VRDIAAGKDVKETIVKEIPSAKVDAMELDLSS 62
           ++TG++ G+G   A  LA  G ++V+   R   A  +  E I K     KV  ++ ++  
Sbjct: 8   LVTGSSRGVGKAAAIRLAENGYNIVINYARSKKAALETAEEIEKL--GVKVLVVKANVGQ 65

Query: 63  LASVRNFASEYNIQHHQLNILINNAGIMG-TPFM-LSKDNIELQFATNHLGHFLLTNLLL 120
            A ++    + +    +L++ +NNA      P M L + + +     N            
Sbjct: 66  PAKIKEMFQQIDETFGRLDVFVNNAASGVLRPVMELEETHWDWTMNINAKALLFCAQEAA 125

Query: 121 DTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANIL-- 178
             M+K      G G I+++SS               +        +     SK A     
Sbjct: 126 KLMEK-----NGGGHIVSISS---------------LGSIRYLENYTTVGVSKAALEALT 165

Query: 179 --HANELARRLKEDGVDITANSVHPGAIATNIIRH 211
              A EL+ +       I  N+V  GAI T+ ++H
Sbjct: 166 RYLAVELSPK------QIIVNAVSGGAIDTDALKH 194

>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A* Length = 249

 Score = 92.2 bits (230), Expect = 1e-22
 Identities = 52/209 (24%), Positives = 83/209 (39%), Gaps = 36/209 (17%)

Query: 4   VITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSL 63
           VITG  +GIG   A   A+ G  +   + D+    + +  I       +V  ++ D+S  
Sbjct: 11  VITGGANGIGRAIAERFAVEGADIA--IADLVPAPEAEAAIRNL--GRRVLTVKCDVSQP 66

Query: 64  ASVRNFASEYNIQHHQLNILINNAGIMG-TPFM-LSKDNIELQFATNHLGHFLLTNLLLD 121
             V  F  +      + +IL+NNAGI    PF  L+ +  +  F  N    FL+    + 
Sbjct: 67  GDVEAFGKQVISTFGRCDILVNNAGIYPLIPFDELTFEQWKKTFEINVDSGFLMAKAFVP 126

Query: 122 TMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANIL--- 178
            MK+      G GRIIN++S                        +  Y  +K ANI    
Sbjct: 127 GMKR-----NGWGRIINLTS---------------TTYWLKIEAYTHYISTKAANIGFTR 166

Query: 179 -HANELARRLKEDGVDITANSVHPGAIAT 206
             A++L +        IT N++ P  + T
Sbjct: 167 ALASDLGKD------GITVNAIAPSLVRT 189

>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp} Length = 253

 Score = 92.2 bits (230), Expect = 1e-22
 Identities = 48/218 (22%), Positives = 80/218 (36%), Gaps = 44/218 (20%)

Query: 4   VITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSA--KVDAMELDLS 61
           ++TG+  GIG   A  LA  G  VV+   +  A + V     K+I +      ++ +D+S
Sbjct: 13  IVTGSGGGIGQAYAEALAREGAAVVVADINAEAAEAV----AKQIVADGGTAISVAVDVS 68

Query: 62  SLASVRNFASEYNIQHHQLNILINNAGIMG----TPFM-LSKDNIELQFATNHLGHFLLT 116
              S +  A     +   ++ L+NNA I G       + +  +  +   + N  G    T
Sbjct: 69  DPESAKAMADRTLAEFGGIDYLVNNAAIFGGMKLDFLLTIDPEYYKKFMSVNLDGALWCT 128

Query: 117 NLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLAN 176
             +   M K      G G I+N SS                   + +     Y  +K+  
Sbjct: 129 RAVYKKMTKR-----GGGAIVNQSST------------------AAWLYSNYYGLAKVGI 165

Query: 177 IL----HANELARRLKEDGVDITANSVHPGAIATNIIR 210
                  + EL  R      +I  N++ PG I T   R
Sbjct: 166 NGLTQQLSRELGGR------NIRINAIAPGPIDTEANR 197

>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A* Length = 260

 Score = 92.3 bits (230), Expect = 1e-22
 Identities = 60/215 (27%), Positives = 87/215 (40%), Gaps = 36/215 (16%)

Query: 4   VITGATSGIGTETARVLALRGVHVVM-GVRDIAAGKDVKETIVKEIPSAKVDAMELDLSS 62
           V+TG+TSGIG   A  LA +G  +V+ G  D A  + V+  +  +    KV     DLS 
Sbjct: 8   VVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQH-GVKVLYDGADLSK 66

Query: 63  LASVRNFASEYNIQHHQLNILINNAGIMG-TPFM-LSKDNIELQFATNHLGHFLLTNLLL 120
             +VR        Q  +++IL+NNAGI           +  +   A N    F  T   L
Sbjct: 67  GEAVRGLVDNAVRQMGRIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTAAAL 126

Query: 121 DTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSK-----LA 175
             MKK      G GRIIN++S                +         AY  +K       
Sbjct: 127 PHMKK-----QGFGRIINIAS---------------AHGLVASANKSAYVAAKHGVVGFT 166

Query: 176 NILHANELARRLKEDGVDITANSVHPGAIATNIIR 210
            +  A E A +       ITAN++ PG + T ++ 
Sbjct: 167 KVT-ALETAGQ------GITANAICPGWVRTPLVE 194

>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} Length = 287

 Score = 92.7 bits (231), Expect = 1e-22
 Identities = 47/238 (19%), Positives = 79/238 (33%), Gaps = 41/238 (17%)

Query: 4   VITGATSGIGTETARVLALRGVHVVMGVRDIAAG-----------KDVKETIVKEIPSA- 51
           ++TG   G G   A  LA  G  ++  + DI              +D++E    E+    
Sbjct: 14  LVTGGARGQGRSHAVKLAEEGADII--LFDICHDIETNEYPLATSRDLEEA-GLEVEKTG 70

Query: 52  -KVDAMELDLSSLASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQFATNHL 110
            K    E+D+   A+V    +    +  +L++++ NAGI      L        F  + +
Sbjct: 71  RKAYTAEVDVRDRAAVSRELANAVAEFGKLDVVVANAGICPLGAHLPVQAFADAFDVDFV 130

Query: 111 GHFLLTNLLLDTMKKTARKSGGEGRIINVSS-EGHRLAYHEGIRFDKINDPSGYNGFRAY 169
           G          T+            II   S  G                     G   Y
Sbjct: 131 GVIN-------TVHAALPYLTSGASIITTGSVAGLI-----AAAQPPGAGGPQGPGGAGY 178

Query: 170 SQSK-----LANILHANELARRLKEDGVDITANSVHPGAIATNIIRHNSLFRSMNTIL 222
           S +K         L A +LA +       I AN +HP  + T+++    ++R     L
Sbjct: 179 SYAKQLVDSYTLQL-AAQLAPQ------SIRANVIHPTNVNTDMLNSAPMYRQFRPDL 229

>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A Length = 270

 Score = 92.3 bits (230), Expect = 2e-22
 Identities = 42/213 (19%), Positives = 75/213 (35%), Gaps = 42/213 (19%)

Query: 4   VITGATSGIGTETARVLALRGVHVVMG-VRDIAAGKDVKETIVKEIPSAKVDAMEL--DL 60
           ++TG+  GIG   A  L   G  VV+         + V    V EI +   DA+ +  D+
Sbjct: 22  LVTGSGRGIGAAVAVHLGRLGAKVVVNYANSTKDAEKV----VSEIKALGSDAIAIKADI 77

Query: 61  SSLASVRNFASEYNIQHHQLNILINNAGIMG-TPFM-LSKDNIELQFATNHLGHFLLTNL 118
             +  +     +       L+I ++N+G++       ++++  +  F+ N  G F +   
Sbjct: 78  RQVPEIVKLFDQAVAHFGHLDIAVSNSGVVSFGHLKDVTEEEFDRVFSLNTRGQFFVARE 137

Query: 119 LLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSK----- 173
               + +        GRI+  SS   +                       YS SK     
Sbjct: 138 AYRHLTE-------GGRIVLTSSNTSKDF--------------SVPKHSLYSGSKGAVDS 176

Query: 174 LANILHANELARRLKEDGVDITANSVHPGAIAT 206
              I  + +   +       IT N+V PG   T
Sbjct: 177 FVRIF-SKDCGDK------KITVNAVAPGGTVT 202

>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1} Length = 262

 Score = 91.8 bits (229), Expect = 2e-22
 Identities = 38/212 (17%), Positives = 74/212 (34%), Gaps = 39/212 (18%)

Query: 4   VITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMEL--DLS 61
           VI G    +G  TA+  AL  V++V+            +    E+            DLS
Sbjct: 15  VIAGGIKNLGALTAKTFALESVNLVLHYHQAKDSDTANKL-KDELEDQGAKVALYQSDLS 73

Query: 62  SLASVRNFASEYNIQHHQLNILINNAGIMG-TPFM-LSKDNIELQFATNHLGHFLLTNLL 119
           +   V         +  +++I IN  G +   P +  S+   +     N+   +      
Sbjct: 74  NEEEVAKLFDFAEKEFGKVDIAINTVGKVLKKPIVETSEAEFDAMDTINNKVAYF----- 128

Query: 120 LDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANILH 179
              +K+ A+     G II +++                   +    +  Y+ +K A + H
Sbjct: 129 --FIKQAAKHMNPNGHIITIAT---------------SLLAAYTGFYSTYAGNK-APVEH 170

Query: 180 -----ANELARRLKEDGVDITANSVHPGAIAT 206
                + EL ++       I+ N++ PG + T
Sbjct: 171 YTRAASKELMKQ------QISVNAIAPGPMDT 196

>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens} Length = 263

 Score = 91.5 bits (228), Expect = 3e-22
 Identities = 49/206 (23%), Positives = 75/206 (36%), Gaps = 30/206 (14%)

Query: 4   VITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSL 63
           ++TG + GIG   AR L   G  V +   D+ A + V   +          A+E+D++  
Sbjct: 16  IVTGGSKGIGAAIARALDKAGATVAIADLDVMAAQAVVAGL-----ENGGFAVEVDVTKR 70

Query: 64  ASVRNFASEYNIQHHQLNILINNAGIMG-TPFM-LSKDNIELQFATNHLGHFLLTNLLLD 121
           ASV     +        ++L  NAG+    P + ++ +  +  F  N  G FL   +   
Sbjct: 71  ASVDAAMQKAIDALGGFDLLCANAGVSTMRPAVDITDEEWDFNFDVNARGVFLANQIACR 130

Query: 122 TMKKTARKSGGEGRIINVSSE-GHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANILHA 180
                   S  +G I+N +S                     G      YS SK A     
Sbjct: 131 HF----LASNTKGVIVNTASLAAKV----------------GAPLLAHYSASKFAVFGWT 170

Query: 181 NELARRLKEDGVDITANSVHPGAIAT 206
             LAR +      I  N V PG + T
Sbjct: 171 QALAREMAPKN--IRVNCVCPGFVKT 194

>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A Length = 255

 Score = 90.7 bits (226), Expect = 4e-22
 Identities = 55/220 (25%), Positives = 87/220 (39%), Gaps = 50/220 (22%)

Query: 4   VITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSA--KVDAMELDLS 61
           ++TG+TSGIG   A+VLA  G ++V+       G       + EI     K      DLS
Sbjct: 8   LVTGSTSGIGLGIAQVLARAGANIVL------NGFGDPAPALAEIARHGVKAVHHPADLS 61

Query: 62  SLASVRNFASEYNIQHHQLNILINNAGIMG-TPFM-LSKDNIELQFATNHLGHFLLTNLL 119
            +A +    +    +   ++IL+NNAGI    P      ++ +   A N    F  T L 
Sbjct: 62  DVAQIEALFALAEREFGGVDILVNNAGIQHVAPVEQFPLESWDKIIALNLSAVFHGTRLA 121

Query: 120 LDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANILH 179
           L  M+         GRIIN++S               ++   G  G  AY  +K     H
Sbjct: 122 LPGMRA-----RNWGRIINIAS---------------VHGLVGSTGKAAYVAAK-----H 156

Query: 180 ---------ANELARRLKEDGVDITANSVHPGAIATNIIR 210
                      E A        ++T N++ PG + T +++
Sbjct: 157 GVVGLTKVVGLETATS------NVTCNAICPGWVLTPLVQ 190

>3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides} Length = 266

 Score = 91.1 bits (227), Expect = 4e-22
 Identities = 44/209 (21%), Positives = 68/209 (32%), Gaps = 37/209 (17%)

Query: 4   VITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSL 63
           ++TGA  GIG      L   G  V +  R +A               A    +  DL   
Sbjct: 32  LVTGAAGGIGGAVVTALRAAGARVAVADRAVAGI-------------AADLHLPGDLREA 78

Query: 64  ASVRNFASEYNIQHHQLNILINNAGIMG-TPFM-LSKDNIELQFATNHLGHFLLTNLLLD 121
           A              +L+I++NNAG++        +  +  L    N    F +    + 
Sbjct: 79  AYADGLPGAVAAGLGRLDIVVNNAGVISRGRITETTDADWSLSLGVNVEAPFRICRAAIP 138

Query: 122 TMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANILHAN 181
            M        G G I+NV+S         G+R           G   Y  +K A      
Sbjct: 139 LMAAA-----GGGAIVNVASCW-------GLR--------PGPGHALYCLTKAALASLTQ 178

Query: 182 ELARRLKEDGVDITANSVHPGAIATNIIR 210
            +       G  I  N+V P  + T ++R
Sbjct: 179 CMGMDHAPQG--IRINAVCPNEVNTPMLR 205

>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis} Length = 281

 Score = 91.2 bits (227), Expect = 4e-22
 Identities = 55/220 (25%), Positives = 92/220 (41%), Gaps = 39/220 (17%)

Query: 5   ITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLA 64
           +TGA+SG G   A      G  V+   R   A  D+           + +A+ LD++   
Sbjct: 10  VTGASSGFGRAIAEAAVAAGDTVIGTARRTEALDDLVAAY-----PDRAEAISLDVTDGE 64

Query: 65  SVRNFASEYNIQHHQLNILINNAG--IMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDT 122
            +   A++   ++ ++++L+NNAG   +G     ++  +   F  +  G   LT  LL  
Sbjct: 65  RIDVVAADVLARYGRVDVLVNNAGRTQVGAFEETTERELRDLFELHVFGPARLTRALLPQ 124

Query: 123 MKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANILHANE 182
           M+   R S   G ++N+SS G +L                + GF AYS +K      A E
Sbjct: 125 MR--ERGS---GSVVNISSFGGQL---------------SFAGFSAYSATK-----AALE 159

Query: 183 -----LARRLKEDGVDITANSVHPGAIATNIIRHNSLFRS 217
                LA  +   G+ +    V PGA  TN+    + + S
Sbjct: 160 QLSEGLADEVAPFGIKVLI--VEPGAFRTNLFGKGAAYFS 197

>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A* Length = 283

 Score = 90.8 bits (226), Expect = 6e-22
 Identities = 45/213 (21%), Positives = 78/213 (36%), Gaps = 42/213 (19%)

Query: 4   VITGATSGIGTETARVLALRGVHVVMG-VRDIAAGKDVKETIVKEIPSAKVDAMEL--DL 60
           ++TGA  GIG E A  L  RG  V++       + ++V    V  I     DA  +  ++
Sbjct: 33  LVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEV----VAAIKKNGSDAACVKANV 88

Query: 61  SSLASVRNFASEYNIQHHQLNILINNAGIMG-TPFM-LSKDNIELQFATNHLGHFLLTNL 118
             +  +     E      +L+I+ +N+G++       ++ +  +  F  N  G F +   
Sbjct: 89  GVVEDIVRMFEEAVKIFGKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVARE 148

Query: 119 LLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSK----- 173
               ++         GR+I + S   +                       YS SK     
Sbjct: 149 AYKHLEI-------GGRLILMGSITGQA--------------KAVPKHAVYSGSKGAIET 187

Query: 174 LANILHANELARRLKEDGVDITANSVHPGAIAT 206
            A  + A ++A +       IT N V PG I T
Sbjct: 188 FARCM-AIDMADK------KITVNVVAPGGIKT 213

>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str} Length = 259

 Score = 90.3 bits (225), Expect = 6e-22
 Identities = 50/215 (23%), Positives = 75/215 (34%), Gaps = 40/215 (18%)

Query: 4   VITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSA--KVDAMELDLS 61
           V+ GA   IG   A   A  G +VV  +    A +      V EI        A++ DL+
Sbjct: 12  VVAGAGRDIGRACAIRFAQEGANVV--LTYNGAAEGAATA-VAEIEKLGRSALAIKADLT 68

Query: 62  SLASVRNFASEYNIQHHQLNILINNAGIMG--TPFM-LSKDNIELQFATNHLGHFLLTNL 118
           + A V    S    +  +++ L++ AG +        + +         N    FL    
Sbjct: 69  NAAEVEAAISAAADKFGEIHGLVHVAGGLIARKTIAEMDEAFWHQVLDVNLTSLFLTAKT 128

Query: 119 LLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANIL 178
            L  M K        G I+  SS+  R                G  G  AY+ SK A + 
Sbjct: 129 ALPKMAKG-------GAIVTFSSQAGRDG--------------GGPGALAYATSKGAVMT 167

Query: 179 ----HANELARRLKEDGVDITANSVHPGAIATNII 209
                A E+  +       I  N+V PG I+T   
Sbjct: 168 FTRGLAKEVGPK-------IRVNAVCPGMISTTFH 195

>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A* Length = 276

 Score = 90.4 bits (225), Expect = 9e-22
 Identities = 42/225 (18%), Positives = 69/225 (30%), Gaps = 44/225 (19%)

Query: 4   VITGATSGIGTETARVLALRGVHVVM-GVRDIAAGKDVKETIVKEIPSAKVDAMELDLSS 62
           VITG    IG   A  L  +G  VV+       A + +   +     +      + DLS 
Sbjct: 15  VITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAEL-NAARAGSAVLCKGDLSL 73

Query: 63  LASVRNFAS---EYNIQHH-QLNILINNAGIMG-TPFMLSKDNIEL------------QF 105
            +S+ +      + + +   + ++L+NNA     TP +   D                 F
Sbjct: 74  SSSLLDCCEDIIDCSFRAFGRCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQVAELF 133

Query: 106 ATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNG 165
            +N +    L         +          ++N+                         G
Sbjct: 134 GSNAVAPLFLIRAFARRQGEGGAWRSRNLSVVNLCD---------------AMTDLPLPG 178

Query: 166 FRAYSQSKLANIL----HANELARRLKEDGVDITANSVHPGAIAT 206
           F  Y+ +K A        A ELA R       I  N+V PG    
Sbjct: 179 FCVYTMAKHALGGLTRAAALELAPR------HIRVNAVAPGLSLL 217

>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti} Length = 280

 Score = 90.3 bits (225), Expect = 9e-22
 Identities = 51/210 (24%), Positives = 81/210 (38%), Gaps = 30/210 (14%)

Query: 4   VITGATSGIGTETARVLALRGVHVVM-GVRDIAAGKDVKETIVKEIPSA--KVDAMELDL 60
           ++TG   GIG   AR LA  G  + + G+ D      V    + E+     +V  +  DL
Sbjct: 33  IVTGGRRGIGLGIARALAASGFDIAITGIGDAEGVAPV----IAELSGLGARVIFLRADL 88

Query: 61  SSLASVRNFASEYNIQHHQLNILINNAGIMGT---PFM-LSKDNIELQFATNHLGHFLLT 116
           + L+S +        +  +++ L+NNAGI       F+ L  +N +     N  G    T
Sbjct: 89  ADLSSHQATVDAVVAEFGRIDCLVNNAGIASIVRDDFLDLKPENFDTIVGVNLRGTVFFT 148

Query: 117 NLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLAN 176
             +L  M  +  ++     IIN++S               ++          Y  SK   
Sbjct: 149 QAVLKAMLASDARAS--RSIINITS---------------VSAVMTSPERLDYCMSKAGL 191

Query: 177 ILHANELARRLKEDGVDITANSVHPGAIAT 206
              +  LA RL E G  I    V PG I +
Sbjct: 192 AAFSQGLALRLAETG--IAVFEVRPGIIRS 219

>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium} Length = 299

 Score = 90.0 bits (224), Expect = 1e-21
 Identities = 51/243 (20%), Positives = 87/243 (35%), Gaps = 56/243 (23%)

Query: 4   VITGATSGIGTETARVLALRGVHVVMGVRDIAAGK-----------DVKETIVKEIPSA- 51
            ITGA  G G   A  LA  G  ++    D+               D+ ET V+++ +  
Sbjct: 32  FITGAARGQGRSHAITLAREGADII--AIDVCKQLDGVKLPMSTPDDLAET-VRQVEALG 88

Query: 52  -KVDAMELDLSSLASVRNFASEYNIQHHQLNILINNAGI--MGTPFM-LSKDNIELQFAT 107
            ++ A ++D+    +++    +   Q  +L+I++ NA +   GT    +           
Sbjct: 89  RRIIASQVDVRDFDAMQAAVDDGVTQLGRLDIVLANAALASEGTRLNRMDPKTWRDMIDV 148

Query: 108 NHLGHFLLTNLLLDTMKKTAR---KSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYN 164
           N  G ++       T +            G I+  SS G       G+R        G  
Sbjct: 149 NLNGAWI-------TARVAIPHIMAGKRGGSIVFTSSIG-------GLR--------GAE 186

Query: 165 GFRAYSQSK-----LANILHANELARRLKEDGVDITANSVHPGAIATNIIRHNSLFRSMN 219
               Y  SK     L   + A EL  R      +I  N V P ++AT ++ +   +R   
Sbjct: 187 NIGNYIASKHGLHGLMRTM-ALELGPR------NIRVNIVCPSSVATPMLLNEPTYRMFR 239

Query: 220 TIL 222
             L
Sbjct: 240 PDL 242

>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber} Length = 279

 Score = 89.2 bits (222), Expect = 2e-21
 Identities = 52/210 (24%), Positives = 75/210 (35%), Gaps = 34/210 (16%)

Query: 4   VITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSL 63
            +TG +SGIG   AR LA RG+ V    RD        + +        VD    D++S 
Sbjct: 28  FVTGVSSGIGLAVARTLAARGIAVYGCARDAKNVSAAVDGLRAA--GHDVDGSSCDVTST 85

Query: 64  ASVRNFASEYNIQHHQLNILINNAGIMG-TPFM-LSKDNIELQFATNHLGHFLLTNLLLD 121
             V    +    +   + IL+N+AG  G      L          TN  G F +T  +L 
Sbjct: 86  DEVHAAVAAAVERFGPIGILVNSAGRNGGGETADLDDALWADVLDTNLTGVFRVTREVLR 145

Query: 122 TMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANIL--- 178
                       GRI+N++S                    G      Y+ SK   ++   
Sbjct: 146 AGGMREAGW---GRIVNIAS---------------TGGKQGVMYAAPYTASK-HGVVGFT 186

Query: 179 --HANELARRLKEDGVDITANSVHPGAIAT 206
                ELA+        IT N+V PG + T
Sbjct: 187 KSVGFELAKT------GITVNAVCPGYVET 210

>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp} Length = 255

 Score = 88.7 bits (221), Expect = 2e-21
 Identities = 45/212 (21%), Positives = 83/212 (39%), Gaps = 35/212 (16%)

Query: 4   VITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSL 63
           ++TG+  G+G   A  LA  G  V++         +  +T+ ++        +  D++  
Sbjct: 13  LVTGSARGLGFAYAEGLAAAGARVILNDIRATLLAESVDTLTRK--GYDAHGVAFDVTDE 70

Query: 64  ASVRNFASEYNIQHHQLNILINNAGI-MGTPFM-LSKDNIELQFATNHLGHFLLTNLLLD 121
            ++    S+ + +   ++ILINNAGI    P + L  +N +    TN    FL++     
Sbjct: 71  LAIEAAFSKLDAEGIHVDILINNAGIQYRKPMVELELENWQKVIDTNLTSAFLVSRSAAK 130

Query: 122 TMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANILH-- 179
            M          G+IIN+ S               +   +       Y+ +K   I    
Sbjct: 131 RMI----ARNSGGKIINIGS---------------LTSQAARPTVAPYTAAK-GGIKMLT 170

Query: 180 ---ANELARRLKEDGVDITANSVHPGAIATNI 208
              A E A+       +I  N++ PG I T++
Sbjct: 171 CSMAAEWAQF------NIQTNAIGPGYILTDM 196

>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A* Length = 260

 Score = 88.7 bits (221), Expect = 3e-21
 Identities = 50/212 (23%), Positives = 78/212 (36%), Gaps = 39/212 (18%)

Query: 4   VITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSL 63
           ++TG + GIG      LA  G  V    R+     D       +    KV+A   DLSS 
Sbjct: 13  LVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSK--GFKVEASVCDLSSR 70

Query: 64  ASVRNFASEYNIQHH-QLNILINNAGI-MGTPFM-LSKDNIELQFATNHLGHFLLTNLLL 120
           +  +   +      H +LNIL+NNAGI +       + ++  L  + N    + L+ L  
Sbjct: 71  SERQELMNTVANHFHGKLNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLSVLAH 130

Query: 121 DTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLA----- 175
             +K         G ++ +SS               ++          Y  +K A     
Sbjct: 131 PFLKA-----SERGNVVFISS---------------VSGALAVPYEAVYGATKGAMDQLT 170

Query: 176 -NILHANELARRLKEDGVDITANSVHPGAIAT 206
             +  A E A+       +I  N V PG IAT
Sbjct: 171 RCL--AFEWAKD------NIRVNGVGPGVIAT 194

>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis} Length = 266

 Score = 88.7 bits (221), Expect = 3e-21
 Identities = 40/214 (18%), Positives = 80/214 (37%), Gaps = 33/214 (15%)

Query: 4   VITGAT-SGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSS 62
           ++T A  +GIG+ TAR   L G  VV+         + ++ +  ++   +V+A+  D++S
Sbjct: 26  LVTAAAGTGIGSTTARRALLEGADVVISDYHERRLGETRDQL-ADLGLGRVEAVVCDVTS 84

Query: 63  LASVRNFASEYNIQHHQLNILINNAGIMG-TPFM-LSKDNIELQFATNHLGHFLLTNLLL 120
             +V    ++   +  +L++L+NNAG+ G TP + ++ +  +             T   L
Sbjct: 85  TEAVDALITQTVEKAGRLDVLVNNAGLGGQTPVVDMTDEEWDRVLNVTLTSVMRATRAAL 144

Query: 121 DTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANIL-- 178
                  R     G I+N +S               +      +    Y+ +K   +   
Sbjct: 145 RYF----RGVDHGGVIVNNAS---------------VLGWRAQHSQSHYAAAKAGVMALT 185

Query: 179 --HANELARRLKEDGVDITANSVHPGAIATNIIR 210
              A E           +  N+V P       + 
Sbjct: 186 RCSAIEAVEF------GVRINAVSPSIARHKFLE 213

>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A* Length = 241

 Score = 88.1 bits (219), Expect = 3e-21
 Identities = 25/211 (11%), Positives = 65/211 (30%), Gaps = 35/211 (16%)

Query: 3   IVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSS 62
           +++ G    +G+   +    R   V     D+   ++   +++ ++  +  +  +   + 
Sbjct: 10  VLVYGGRGALGSRCVQAFRARNWWVA--SIDVVENEEASASVIVKMTDSFTEQADQVTAE 67

Query: 63  LASVRNFASEYNIQHHQLNILINNAGI--MGTPF-MLSKDNIELQFATNHLGHFLLTNLL 119
           +  +            +++ ++  AG    G         N +L +  +     + ++L 
Sbjct: 68  VGKLLGDQ--------KVDAILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLA 119

Query: 120 LDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANILH 179
              +K+        G +    +                    G  G   Y  +K A    
Sbjct: 120 TKHLKEG-------GLLTLAGA---------------KAALDGTPGMIGYGMAKGAVHQL 157

Query: 180 ANELARRLKEDGVDITANSVHPGAIATNIIR 210
              LA +         A +V P  + T + R
Sbjct: 158 CQSLAGKNSGMPSGAAAIAVLPVTLDTPMNR 188

>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} Length = 262

 Score = 88.4 bits (220), Expect = 3e-21
 Identities = 53/212 (25%), Positives = 79/212 (37%), Gaps = 38/212 (17%)

Query: 4   VITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSL 63
           V+TG T GIG   A V A  G +V +  R  A        + +     KV  ++ D+S  
Sbjct: 14  VVTGGTKGIGRGIATVFARAGANVAVAGRSTADIDACVADLDQLGS-GKVIGVQTDVSDR 72

Query: 64  ASVRNFASEYNIQHHQLNILINNAGIMGTPFML----SKDNIELQFATNHLGHFLLTNLL 119
           A     A     +   ++++  NAG+   P       + + +   FA N  G F      
Sbjct: 73  AQCDALAGRAVEEFGGIDVVCANAGV--FPDAPLATMTPEQLNGIFAVNVNGTFYAVQAC 130

Query: 120 LDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANIL- 178
           LD +   +      GR++  SS                   +GY G+  Y  +K A  L 
Sbjct: 131 LDALIA-SGS----GRVVLTSS--------------ITGPITGYPGWSHYGATK-AAQLG 170

Query: 179 ----HANELARRLKEDGVDITANSVHPGAIAT 206
                A ELA         IT N++ PG I T
Sbjct: 171 FMRTAAIELAPH------KITVNAIMPGNIMT 196

>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2 Length = 303

 Score = 88.9 bits (221), Expect = 4e-21
 Identities = 41/214 (19%), Positives = 73/214 (34%), Gaps = 38/214 (17%)

Query: 3   IVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSA---KVDAMELD 59
            ++TG  +GIG    + L   G +VV+  R +   K   + +   +P     +V  ++ +
Sbjct: 21  AIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCN 80

Query: 60  LSSLASVRNFASEYNIQHHQLNILINNAGI-MGTPFM-LSKDNIELQFATNHLGHFLLTN 117
           + +   V N          ++N L+NN G    +P   +S         TN  G F +  
Sbjct: 81  IRNEEEVNNLVKSTLDTFGKINFLVNNGGGQFLSPAEHISSKGWHAVLETNLTGTFYMCK 140

Query: 118 LLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANI 177
            +  +  K        G I+N+                      G+        ++ A +
Sbjct: 141 AVYSSWMK-----EHGGSIVNIIVPTKA----------------GFPLAVHSGAAR-AGV 178

Query: 178 LH-----ANELARRLKEDGVDITANSVHPGAIAT 206
            +     A E A         I  N V PG I +
Sbjct: 179 YNLTKSLALEWACS------GIRINCVAPGVIYS 206

>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus} Length = 266

 Score = 88.0 bits (219), Expect = 5e-21
 Identities = 45/213 (21%), Positives = 83/213 (38%), Gaps = 32/213 (15%)

Query: 3   IVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSS 62
           +VITGA+SGIG   AR  +  G  +++  R +          +K +        ++D++ 
Sbjct: 19  VVITGASSGIGEAIARRFSEEGHPLLLLARRVER--------LKALNLPNTLCAQVDVTD 70

Query: 63  LASVRNFASEYNIQHHQLNILINNAGIM-GTPFM-LSKDNIELQFATNHLGHFLLTNLLL 120
             +     +     +   + ++NNAG+M          +  +  F  N LG       +L
Sbjct: 71  KYTFDTAITRAEKIYGPADAIVNNAGMMLLGQIDTQEANEWQRMFDVNVLGLLNGMQAVL 130

Query: 121 DTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANILHA 180
             MK  AR     G IIN+SS   +  +              +     Y  +K A  +HA
Sbjct: 131 APMK--ARNC---GTIINISSIAGKKTF------------PDHAA---YCGTKFA--VHA 168

Query: 181 NELARRLKEDGVDITANSVHPGAIATNIIRHNS 213
                R +    ++   ++ P A+ T ++ H +
Sbjct: 169 ISENVREEVAASNVRVMTIAPSAVKTELLSHTT 201

>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A Length = 266

 Score = 87.9 bits (219), Expect = 5e-21
 Identities = 50/206 (24%), Positives = 72/206 (34%), Gaps = 27/206 (13%)

Query: 4   VITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSL 63
           ++TG T GIG       A  G  +    R+     +      K+    +V     D S  
Sbjct: 18  LVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKK--GFQVTGSVCDASLR 75

Query: 64  ASVRNFASEYNIQH-HQLNILINNAGI-MGTPFM-LSKDNIELQFATNHLGHFLLTNLLL 120
                     +     +L+ILINN G     P +  + ++     +TN    + L+ L  
Sbjct: 76  PEREKLMQTVSSMFGGKLDILINNLGAIRSKPTLDYTAEDFSFHISTNLESAYHLSQLAH 135

Query: 121 DTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANILHA 180
             +K       G G II +SS               I      +    YS +K A    A
Sbjct: 136 PLLKA-----SGCGNIIFMSS---------------IAGVVSASVGSIYSATKGALNQLA 175

Query: 181 NELARRLKEDGVDITANSVHPGAIAT 206
             LA     DG  I AN+V P  IAT
Sbjct: 176 RNLACEWASDG--IRANAVAPAVIAT 199

>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A* Length = 277

 Score = 88.1 bits (219), Expect = 6e-21
 Identities = 53/210 (25%), Positives = 84/210 (40%), Gaps = 34/210 (16%)

Query: 4   VITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSL 63
           ++TGATSGIG E AR L   G+ V +  R     +   + + +     + D    D+ S+
Sbjct: 26  LVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREA--GVEADGRTCDVRSV 83

Query: 64  ASVRNFASEYNIQHHQLNILINNAGI-MGTPFM-LSKDNIELQFATNHLGHFLLTNLLLD 121
             +    +    ++  +++L+NNAG   G     L+ +       TN  G F +T  +L 
Sbjct: 84  PEIEALVAAVVERYGPVDVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQVLK 143

Query: 122 TMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANIL--- 178
                 R +   GRI+N++S                    G      YS SK   ++   
Sbjct: 144 AGGMLERGT---GRIVNIAS---------------TGGKQGVVHAAPYSASK-HGVVGFT 184

Query: 179 --HANELARRLKEDGVDITANSVHPGAIAT 206
                ELAR        IT N+V PG + T
Sbjct: 185 KALGLELART------GITVNAVCPGFVET 208

>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum} Length = 276

 Score = 88.0 bits (219), Expect = 6e-21
 Identities = 57/216 (26%), Positives = 82/216 (37%), Gaps = 35/216 (16%)

Query: 4   VITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSL 63
           +ITGA++GIG + A   A  G  V +  R   A + V + I       K   +  D++  
Sbjct: 36  LITGASTGIGKKVALAYAEAGAQVAVAARHSDALQVVADEIAGV--GGKALPIRCDVTQP 93

Query: 64  ASVRNFASEYNIQHHQLNILINNAGI-MGTPFM-LSKDNIELQFATNHLGHFLLTNLLLD 121
             VR    +   +   ++I + NAGI      + +  +  +    TN  G FL       
Sbjct: 94  DQVRGMLDQMTGELGGIDIAVCNAGIVSVQAMLDMPLEEFQRIQDTNVTGVFLTAQAAAR 153

Query: 122 TMKKTARKSGGEGRIINVSS-EGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANILH- 179
            M       G  G II  +S  GH            IN P   +    Y  SK A ++H 
Sbjct: 154 AM----VDQGLGGTIITTASMSGHI-----------INIPQQVS---HYCTSK-AAVVHL 194

Query: 180 ----ANELARRLKEDGVDITANSVHPGAIATNIIRH 211
               A ELA         I  NSV PG I T ++  
Sbjct: 195 TKAMAVELAPH------QIRVNSVSPGYIRTELVEP 224

>1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 236

 Score = 86.6 bits (215), Expect = 9e-21
 Identities = 27/211 (12%), Positives = 58/211 (27%), Gaps = 35/211 (16%)

Query: 3   IVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSS 62
           +++ G    +G+         G  V+    D++A       I+ +      +  +  L  
Sbjct: 6   VIVYGGKGALGSAILEFFKKNGYTVL--NIDLSANDQADSNILVDGNKNWTEQEQSILEQ 63

Query: 63  LASVRNFASEYNIQHHQLNILINNAGI--MGTPF-MLSKDNIELQFATNHLGHFLLTNLL 119
            AS    +        Q++ +   AG    G+        N +L    +     +   L 
Sbjct: 64  TASSLQGS--------QVDGVFCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLA 115

Query: 120 LDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANILH 179
              +K         G +    +                           Y  +K A    
Sbjct: 116 TTHLKPG-------GLLQLTGA---------------AAAMGPTPSMIGYGMAKAAVHHL 153

Query: 180 ANELARRLKEDGVDITANSVHPGAIATNIIR 210
            + LA +      +    ++ P  + T + R
Sbjct: 154 TSSLAAKDSGLPDNSAVLTIMPVTLDTPMNR 184

>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} Length = 277

 Score = 87.6 bits (218), Expect = 9e-21
 Identities = 52/244 (21%), Positives = 85/244 (34%), Gaps = 58/244 (23%)

Query: 4   VITGATSGIGTETARVLALRGVHVVMGVRDIAAGK------------DVKETIVKEIPSA 51
            ITGA  G G   A  +A  G  ++    DIA               D+ ET V+ + +A
Sbjct: 15  FITGAARGQGRAHAVRMAAEGADII--AVDIAGKLPSCVPYDPASPDDLSET-VRLVEAA 71

Query: 52  --KVDAMELDLSSLASVRNFASEYNIQHHQLNILINNAGI--MGTPFMLSKDNIELQFAT 107
             ++ A  +D      +R    +      +L+I++ NAG+        ++ ++       
Sbjct: 72  NRRIVAAVVDTRDFDRLRKVVDDGVAALGRLDIIVANAGVAAPQAWDDITPEDFRDVMDI 131

Query: 108 NHLGHFLLTNLLLDTMKKTAR---KSGGEGRIINVSS-EGHRLAYHEGIRFDKINDPSGY 163
           N  G +        T+   A    + G  G II +SS  G +                  
Sbjct: 132 NVTGTWN-------TVMAGAPRIIEGGRGGSIILISSAAGMK----------------MQ 168

Query: 164 NGFRAYSQSK-----LANILHANELARRLKEDGVDITANSVHPGAIATNIIRHNSLFRSM 218
                Y+ SK     LA    A EL +        I  NSVHPG + T +   + +    
Sbjct: 169 PFMIHYTASKHAVTGLARAF-AAELGKH------SIRVNSVHPGPVNTPMGSGDMVTAVG 221

Query: 219 NTIL 222
             + 
Sbjct: 222 QAME 225

>1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2 Length = 265

 Score = 86.8 bits (216), Expect = 1e-20
 Identities = 48/213 (22%), Positives = 80/213 (37%), Gaps = 29/213 (13%)

Query: 4   VITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSL 63
           ++TG   GIG    R +A  G +V +  R  A   +V E + KE    K  A + D+S+ 
Sbjct: 18  IVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEF-GVKTKAYQCDVSNT 76

Query: 64  ASVRNFASEYNIQHHQLNILINNAGI-MGTPFM-LSKDNIELQFATNHLGHFLLTNLLLD 121
             V     + +     ++ LI NAG+ +  P   L+ ++    +  N  G F     +  
Sbjct: 77  DIVTKTIQQIDADLGPISGLIANAGVSVVKPATELTHEDFAFVYDVNVFGVFNTCRAVAK 136

Query: 122 TMKKTARKSGGEGRIINVSS-EGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANILH- 179
              +  +K    G I+  SS     +              +G      Y+ SK A   + 
Sbjct: 137 LWLQKQQK----GSIVVTSSMSSQIINQSS---------LNGSLTQVFYNSSK-AACSNL 182

Query: 180 ----ANELARRLKEDGVDITANSVHPGAIATNI 208
               A E A         I  N++ PG + T+ 
Sbjct: 183 VKGLAAEWASA------GIRVNALSPGYVNTDQ 209

>1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP} Length = 244

 Score = 86.4 bits (215), Expect = 1e-20
 Identities = 29/213 (13%), Positives = 54/213 (25%), Gaps = 45/213 (21%)

Query: 4   VITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSL 63
           ++T A    G      L   G  VV      A      E    E  +    A+     + 
Sbjct: 5   LVTHARHFAGPAAVEALTQDGYTVVCHDASFADA---AERQRFESENPGTIAL-----AE 56

Query: 64  ASVRNFASEYNIQHHQLNILINNAGIMGTPFML-----SKDNIELQFATNHLGHFLLTNL 118
                           ++ +++N  I      L     S+ +I   F    +   LL   
Sbjct: 57  QKPERLVDATLQHGEAIDTIVSNDYIPRPMNRLPLEGTSEADIRQMFEALSIFPILLLQS 116

Query: 119 LLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANIL 178
            +  ++       G   +I ++S                           Y  ++ A  +
Sbjct: 117 AIAPLRA-----AGGASVIFITS---------------SVGKKPLAYNPLYGPAR-AATV 155

Query: 179 H-----ANELARRLKEDGVDITANSVHPGAIAT 206
                 A  L+R        I   ++ P     
Sbjct: 156 ALVESAAKTLSRD------GILLYAIGPNFFNN 182

>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti} Length = 260

 Score = 86.5 bits (215), Expect = 1e-20
 Identities = 46/212 (21%), Positives = 75/212 (35%), Gaps = 47/212 (22%)

Query: 4   VITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSL 63
           VITGA+ GIG    R    R   VV   R I    D             +  +  D+S  
Sbjct: 32  VITGASQGIGAGLVRAYRDRNYRVVATSRSIKPSAD-----------PDIHTVAGDISKP 80

Query: 64  ASVRNFASEYNIQHHQLNILINNAGIMG-TPFM-LSKDNIELQFATNHLGHFLLTNLLLD 121
            +      E   +  +++ L+NNAG+    PF+ +++++ +     N  G F +T     
Sbjct: 81  ETADRIVREGIERFGRIDSLVNNAGVFLAKPFVEMTQEDYDHNLGVNVAGFFHITQRAAA 140

Query: 122 TMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFR--AYSQSKLANILH 179
            M K      G G I+++++                       G      S +K   +  
Sbjct: 141 EMLKQ-----GSGHIVSITT---------------SLVDQPMVGMPSALASLTK-GGLNA 179

Query: 180 -----ANELARRLKEDGVDITANSVHPGAIAT 206
                A E +R        +  N+V PG I T
Sbjct: 180 VTRSLAMEFSRS------GVRVNAVSPGVIKT 205

>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} Length = 280

 Score = 86.8 bits (216), Expect = 2e-20
 Identities = 57/241 (23%), Positives = 91/241 (37%), Gaps = 56/241 (23%)

Query: 4   VITGATSGIGTETARVLALRGVHVVMGVRDIAAGK------------DVKETIVKEIPSA 51
            ITGA  G G   A  LA  G  ++    DI A              D+ ET  + +   
Sbjct: 19  FITGAARGQGRSHAVRLAAEGADII--ACDICAPVSASVTYAPASPEDLDET-ARLVEDQ 75

Query: 52  --KVDAMELDLSSLASVRNFASEYNIQHHQLNILINNAGI--MGTPFMLSKDNIELQFAT 107
             K     LD+   A++R   ++   Q  +L++++ NAG+   G  + L+ +  +     
Sbjct: 76  GRKALTRVLDVRDDAALRELVADGMEQFGRLDVVVANAGVLSWGRVWELTDEQWDTVIGV 135

Query: 108 NHLGHFLLTNLLLDTMKKTAR---KSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYN 164
           N  G +        T++ T     ++G  G I+ VSS         G++           
Sbjct: 136 NLTGTWR-------TLRATVPAMIEAGNGGSIVVVSSSA-------GLK--------ATP 173

Query: 165 GFRAYSQSK-----LANILHANELARRLKEDGVDITANSVHPGAIATNIIRHNSLFRSMN 219
           G   YS SK     L N L A EL          I  NS+HP ++ T +I   ++     
Sbjct: 174 GNGHYSASKHGLTALTNTL-AIELGEY------GIRVNSIHPYSVETPMIEPEAMMEIFA 226

Query: 220 T 220
            
Sbjct: 227 R 227

>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus} Length = 293

 Score = 86.9 bits (216), Expect = 2e-20
 Identities = 53/212 (25%), Positives = 78/212 (36%), Gaps = 38/212 (17%)

Query: 4   VITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSL 63
           ++TG T GIG   A V A  G +V +  R       V   +  E+ +  V  + LD+S  
Sbjct: 45  LVTGGTKGIGRGIATVFARAGANVAVAARSPRELSSVTAEL-GELGAGNVIGVRLDVSDP 103

Query: 64  ASVRNFASEYNIQHHQLNILINNAGIMGTPFML----SKDNIELQFATNHLGHFLLTNLL 119
            S  + A         L+++  NAGI   P       + + +      N  G        
Sbjct: 104 GSCADAARTVVDAFGALDVVCANAGI--FPEARLDTMTPEQLSEVLDVNVKGTVYTVQAC 161

Query: 120 LDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANILH 179
           L  +   + +    GR+I  SS                   +GY G+  Y  SK A  L 
Sbjct: 162 LAPLTA-SGR----GRVILTSS--------------ITGPVTGYPGWSHYGASK-AAQLG 201

Query: 180 -----ANELARRLKEDGVDITANSVHPGAIAT 206
                A ELA R       +T N++ PG I T
Sbjct: 202 FMRTAAIELAPR------GVTVNAILPGNILT 227

>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} PDB: 3uwr_A* Length = 286

 Score = 86.9 bits (216), Expect = 2e-20
 Identities = 52/247 (21%), Positives = 82/247 (33%), Gaps = 60/247 (24%)

Query: 4   VITGATSGIGTETARVLALRGVHVVMGVRDIAAGK---------------DVKETIVKEI 48
            +TGA  G G   A  LA  G  ++    DI                   D+ ET    +
Sbjct: 15  FVTGAARGQGRSHAVRLAQEGADII--AVDICKPIRAGVVDTAIPASTPEDLAET-ADLV 71

Query: 49  PSA--KVDAMELDLSSLASVRNFASEYNIQHHQLNILINNAGI--MGTPFM-LSKDNIEL 103
                ++   E+D+    +++        Q  +L+I++ NAGI   G      S+++   
Sbjct: 72  KGHNRRIVTAEVDVRDYDALKAAVDSGVEQLGRLDIIVANAGIGNGGDTLDKTSEEDWTE 131

Query: 104 QFATNHLGHFLLTNLLLDTMKKTAR---KSGGEGRIINVSSEGHRLAYHEGIRFDKINDP 160
               N  G +        T+K         G  G II  SS G       G++       
Sbjct: 132 MIDINLAGVWK-------TVKAGVPHMIAGGRGGSIILTSSVG-------GLK------- 170

Query: 161 SGYNGFRAYSQSK-----LANILHANELARRLKEDGVDITANSVHPGAIATNIIRHNSLF 215
             Y     Y  +K     L       EL +        I  NSVHP  + T ++ +   F
Sbjct: 171 -AYPHTGHYVAAKHGVVGLMRAF-GVELGQH------MIRVNSVHPTHVKTPMLHNEGTF 222

Query: 216 RSMNTIL 222
           +     L
Sbjct: 223 KMFRPDL 229

>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A* Length = 254

 Score = 86.0 bits (214), Expect = 2e-20
 Identities = 48/211 (22%), Positives = 78/211 (36%), Gaps = 37/211 (17%)

Query: 4   VITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSL 63
            +TGA SGIG E  R  A  G  +++  R+ AA         +E+ +A    +  D++  
Sbjct: 15  AVTGAGSGIGLEICRAFAASGARLILIDREAAALDRA----AQELGAAVAARIVADVTDA 70

Query: 64  ASVRNFASEYNIQHHQLNILINNAGI-MGTPFM-LSKDNIELQFATNHLGHFLLTNLLLD 121
            ++   A+E       ++IL+N+AGI      +           A N  G F  +     
Sbjct: 71  EAMTAAAAEAE-AVAPVSILVNSAGIARLHDALETDDATWRQVMAVNVDGMFWASRAFGR 129

Query: 122 TMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANILH-- 179
            M        G G I+N+ S    ++     R              +Y  SK   +    
Sbjct: 130 AMVAR-----GAGAIVNLGS----MSGTIVNRPQFA---------SSYMASK-GAVHQLT 170

Query: 180 ---ANELARRLKEDGVDITANSVHPGAIATN 207
              A E A R       +  N++ PG +AT 
Sbjct: 171 RALAAEWAGR------GVRVNALAPGYVATE 195

>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp} Length = 278

 Score = 86.1 bits (214), Expect = 3e-20
 Identities = 53/229 (23%), Positives = 81/229 (35%), Gaps = 51/229 (22%)

Query: 4   VITGATSGIGTETARVLALRGVHVVMGVRDIAAGK-----------DVKETIVKEIPSA- 51
            ITGA  G G   A  LA  G  ++    D+               ++  T VK +    
Sbjct: 17  FITGAARGQGRAHAVRLAADGADII--AVDLCDQIASVPYPLATPEELAAT-VKLVEDIG 73

Query: 52  -KVDAMELDLSSLASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQFATNHL 110
            ++ A + D+    S+         +  +L+I++ NAGI   P     D        N  
Sbjct: 74  SRIVARQADVRDRESLSAALQAGLDELGRLDIVVANAGI--APMSAGDDGWHDVIDVNLT 131

Query: 111 GHFLLTNLLLDTMKKTAR---KSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFR 167
           G +        T+K       K G  G I+ +SS         G+      DP    G  
Sbjct: 132 GVYH-------TIKVAIPTLVKQGTGGSIVLISSSA-------GLAGVGSADP----GSV 173

Query: 168 AYSQSK-----LANILHANELARRLKEDGVDITANSVHPGAIATNIIRH 211
            Y  +K     L  +  AN LA +       I  NS+HP  + T +I +
Sbjct: 174 GYVAAKHGVVGLMRVY-ANLLAGQ------MIRVNSIHPSGVETPMINN 215

>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str} Length = 257

 Score = 85.6 bits (213), Expect = 3e-20
 Identities = 43/211 (20%), Positives = 78/211 (36%), Gaps = 34/211 (16%)

Query: 3   IVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSS 62
           ++ITG +SG+G   A   A  G  VV+  R     ++ K  I +     ++  +++D+ +
Sbjct: 9   VIITGGSSGMGKGMATRFAKEGARVVITGRTKEKLEEAKLEIEQF--PGQILTVQMDVRN 66

Query: 63  LASVRNFASEYNIQHHQLNILINNAGI-MGTPFM-LSKDNIELQFATNHLGHFLLTNLLL 120
              ++    + + +  +++ILINNA      P   LS +           G F  +  + 
Sbjct: 67  TDDIQKMIEQIDEKFGRIDILINNAAGNFICPAEDLSVNGWNSVINIVLNGTFYCSQAIG 126

Query: 121 DTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANILH- 179
               +   K    G IIN+ +                       G    + +K A +L  
Sbjct: 127 KYWIEKGIK----GNIINMVA---------------TYAWDAGPGVIHSAAAK-AGVLAM 166

Query: 180 ----ANELARRLKEDGVDITANSVHPGAIAT 206
               A E  R+       I  N++ PG I  
Sbjct: 167 TKTLAVEWGRKY-----GIRVNAIAPGPIER 192

>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium} Length = 281

 Score = 85.8 bits (213), Expect = 4e-20
 Identities = 43/224 (19%), Positives = 80/224 (35%), Gaps = 35/224 (15%)

Query: 1   MDI-----VITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDA 55
                   +++G   G+G  T R L   G+ VV+       GK +      E+   + + 
Sbjct: 26  KQFEGASAIVSGGAGGLGEATVRRLHADGLGVVIADLAAEKGKAL----ADEL-GNRAEF 80

Query: 56  MELDLSSLASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIEL---QF----ATN 108
           +  +++S  SV       N        ++ + G      ++ +D        F       
Sbjct: 81  VSTNVTSEDSVLAAIEAANQLGRLRYAVVAHGGFGVAQRIVQRDGSPADMGGFTKTIDLY 140

Query: 109 HLGHFLLTNLLLDTMKKTARKSGGE-GRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFR 167
             G + +  L+  ++     +  GE G ++  +S    +A +EG             G  
Sbjct: 141 LNGTYNVARLVAASIAAAEPRENGERGALVLTAS----IAGYEGQ-----------IGQT 185

Query: 168 AYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH 211
           AY+ +K   I      AR L   G  I  N++ PG + T I+  
Sbjct: 186 AYAAAKAGVIGLTIAAARDLSSAG--IRVNTIAPGTMKTPIMES 227

>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2 Length = 267

 Score = 85.3 bits (212), Expect = 6e-20
 Identities = 42/211 (19%), Positives = 73/211 (34%), Gaps = 34/211 (16%)

Query: 4   VITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSL 63
           ++TG + G+G   A+ LA  G  VV+  R++    +  + + ++    +  A   D+S+ 
Sbjct: 25  LVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKY-GVETMAFRCDVSNY 83

Query: 64  ASVRNFASEYNIQHHQLNILINNAGI-MGTPFM-LSKDNIELQFATNHLGHFLLTNLLLD 121
             V+        +  +L+ ++N AGI    P      D        N  G + +      
Sbjct: 84  EEVKKLLEAVKEKFGKLDTVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYVCREAFS 143

Query: 122 TMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANILH-- 179
            +++          IIN+ S    L   E                 AY+ SK   +    
Sbjct: 144 LLRE-----SDNPSIINIGS----LTVEEV----------TMPNISAYAASK-GGVASLT 183

Query: 180 ---ANELARRLKEDGVDITANSVHPGAIATN 207
              A E  R        I  N + PG   T 
Sbjct: 184 KALAKEWGRY------GIRVNVIAPGWYRTK 208

>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti} Length = 257

 Score = 85.0 bits (211), Expect = 6e-20
 Identities = 52/224 (23%), Positives = 88/224 (39%), Gaps = 36/224 (16%)

Query: 1   MDI-----VITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDA 55
           M +     ++TGA+SG+G    R+LA  G  V+       AG++       E+  A V  
Sbjct: 3   MQLKSRVFIVTGASSGLGAAVTRMLAQEGATVLGLDLKPPAGEEP----AAEL-GAAVRF 57

Query: 56  MELDLSSLASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKD---NIELQFA----TN 108
              D+++ A      +    +   ++ L+N AG      +L +     ++  FA     N
Sbjct: 58  RNADVTNEADATAALAFAKQEFGHVHGLVNCAGTAPGEKILGRSGPHALD-SFARTVAVN 116

Query: 109 HLGHFLLTNLLLDTMKKTARKSGGE-GRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFR 167
            +G F +  L  + M +    + GE G I+N +S    +A  +G             G  
Sbjct: 117 LIGTFNMIRLAAEVMSQGEPDADGERGVIVNTAS----IAAFDGQI-----------GQA 161

Query: 168 AYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH 211
           AY+ SK          AR L   G  I   ++ PG   T ++  
Sbjct: 162 AYAASKGGVAALTLPAARELARFG--IRVVTIAPGIFDTPMMAG 203

>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A* Length = 277

 Score = 84.6 bits (210), Expect = 1e-19
 Identities = 40/214 (18%), Positives = 73/214 (34%), Gaps = 41/214 (19%)

Query: 3   IVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSS 62
             ITG  SGIG   A +    G H V+  R +         +       +   + +D+ +
Sbjct: 30  AFITGGGSGIGFRIAEIFMRHGCHTVIASRSLPRVLTAARKLAGATG-RRCLPLSMDVRA 88

Query: 63  LASVRNFASEYNIQHHQLNILINNAGI-MGTPFM-LSKDNIELQFATNHLGHFLLTNLLL 120
             +V     +   +  +++ILIN A      P   LS +  +     +  G F ++ +L 
Sbjct: 89  PPAVMAAVDQALKEFGRIDILINCAAGNFLCPAGALSFNAFKTVMDIDTSGTFNVSRVLY 148

Query: 121 DTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFR---AYSQSKLANI 177
           +   +        G I+N+++                    G  G         +K A +
Sbjct: 149 EKFFR-----DHGGVIVNITA------------------TLGNRGQALQVHAGSAK-AAV 184

Query: 178 LH-----ANELARRLKEDGVDITANSVHPGAIAT 206
                  A E   +      +I  NS+ PG I+ 
Sbjct: 185 DAMTRHLAVEWGPQ------NIRVNSLAPGPISG 212

>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ... Length = 288

 Score = 83.8 bits (208), Expect = 2e-19
 Identities = 49/227 (21%), Positives = 71/227 (31%), Gaps = 44/227 (19%)

Query: 4   VITGATSGIGTETARVLALRGVHVVMG-VRDIAAGKDVKETIVKEIPSAKVDAMELDLSS 62
           V+TGA   IG   A  L   G  VV+       A   + + + KE         + DL++
Sbjct: 27  VVTGAAKRIGRAIAVKLHQTGYRVVIHYHNSAEAAVSLADELNKERS-NTAVVCQADLTN 85

Query: 63  ----LASVRNFASEYNIQHHQLNILINNAGIM-GTPF--MLSKDNIELQ---------FA 106
                AS     +       + ++L+NNA     TP      +DN   +           
Sbjct: 86  SNVLPASCEEIINSCFRAFGRCDVLVNNASAFYPTPLVQGDHEDNSNGKTVETQVAELIG 145

Query: 107 TNHLGHFLLTNLLLDTMKKTARK-SGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNG 165
           TN +  FLLT       K T    +     I+N+                          
Sbjct: 146 TNAIAPFLLTMSFAQRQKGTNPNCTSSNLSIVNLCD---------------AMVDQPCMA 190

Query: 166 FRAYSQSKLANIL----HANELARRLKEDGVDITANSVHPGAIATNI 208
           F  Y+  K A +      A ELA         I  N V PG     +
Sbjct: 191 FSLYNMGKHALVGLTQSAALELAPY------GIRVNGVAPGVSLLPV 231

>3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua} Length = 202

 Score = 82.3 bits (204), Expect = 2e-19
 Identities = 29/228 (12%), Positives = 72/228 (31%), Gaps = 61/228 (26%)

Query: 1   MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDL 60
           M I++ GA+  +G+     L  +   V+       AG+                 + +D+
Sbjct: 4   MKILLIGASGTLGSAVKERLE-KKAEVI------TAGR-------------HSGDVTVDI 43

Query: 61  SSLASVRNFASEYNIQHHQLNILINNAGIMG-TPFM-LSKDNIELQFATNHLGHFLLTNL 118
           +++ S++    +      +++ +++  G    +P   L+ +   +  ++   G   L  L
Sbjct: 44  TNIDSIKKMYEQVG----KVDAIVSATGSATFSPLTELTPEKNAVTISSKLGGQINLVLL 99

Query: 119 LLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSK----- 173
            +D++         +G     +                I          + + +      
Sbjct: 100 GIDSLND-------KGSFTLTTG---------------IMMEDPIVQGASAAMANGAVTA 137

Query: 174 LANILHANELARRLKEDGVDITANSVHPGAIATNIIRHNSLFRSMNTI 221
            A    A E+ R        I  N+V P  +  +  +    F     +
Sbjct: 138 FAKSA-AIEMPRG-------IRINTVSPNVLEESWDKLEPFFEGFLPV 177

>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli} Length = 250

 Score = 83.4 bits (207), Expect = 2e-19
 Identities = 49/211 (23%), Positives = 70/211 (33%), Gaps = 48/211 (22%)

Query: 4   VITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSL 63
            +TGA  GIG  TA      G  V    +                         +D++  
Sbjct: 11  WVTGAGKGIGYATALAFVEAGAKVTGFDQAFTQE------------QYPFATEVMDVADA 58

Query: 64  ASVRNFASEYNIQHHQLNILINNAGI--MGTPFMLSKDNIELQFATNHLGHFLLTNLLLD 121
           A V         +  +L+ L+N AGI  MG    LSK++ +  FA N  G F L    ++
Sbjct: 59  AQVAQVCQRLLAETERLDALVNAAGILRMGATDQLSKEDWQQTFAVNVGGAFNLFQQTMN 118

Query: 122 TMKKTARKSGGEGRIINVSS-EGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANILH- 179
             ++        G I+ V+S   H                    G  AY  SK A +   
Sbjct: 119 QFRRQ-----RGGAIVTVASDAAHT----------------PRIGMSAYGASK-AALKSL 156

Query: 180 ----ANELARRLKEDGVDITANSVHPGAIAT 206
                 ELA         +  N V PG+  T
Sbjct: 157 ALSVGLELAGS------GVRCNVVSPGSTDT 181

>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2 Length = 263

 Score = 83.0 bits (206), Expect = 3e-19
 Identities = 44/209 (21%), Positives = 76/209 (36%), Gaps = 40/209 (19%)

Query: 4   VITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSL 63
           ++TGA SGIG     + A  G  +V   R+     +    +      A+  A+  D+S  
Sbjct: 10  LVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAAL-----EAEAIAVVADVSDP 64

Query: 64  ASVRNFASEYNIQHHQLNILINNAGIMG-TPFM-LSKDNIELQFATNHLGHFLLTNLLLD 121
            +V    +E   +  +L+ + + AG+        L  +  E     N  G FL+     +
Sbjct: 65  KAVEAVFAEALEEFGRLHGVAHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVARKAGE 124

Query: 122 TMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANIL--- 178
            +++        G ++   S         G+         G  G   Y+  KL  +    
Sbjct: 125 VLEEG-------GSLVLTGSVA-------GL---------GAFGLAHYAAGKLGVVGLAR 161

Query: 179 -HANELARRLKEDGVDITANSVHPGAIAT 206
             A ELAR+       +  N + PG I T
Sbjct: 162 TLALELARK------GVRVNVLLPGLIQT 184

>1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2 Length = 249

 Score = 82.6 bits (205), Expect = 4e-19
 Identities = 41/219 (18%), Positives = 73/219 (33%), Gaps = 56/219 (25%)

Query: 1   MDI-------VITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKV 53
           M++       ++  A+ GIG   A VL+  G  V +  R+    K      V        
Sbjct: 13  MELGIRDKGVLVLAASRGIGRAVADVLSQEGAEVTICARNEELLKRSGHRYVV------- 65

Query: 54  DAMELDLSSLASVRNFASEYNIQHHQLNILINNAGI-MGTPFM-LSKDNIELQFATNHLG 111
                       +R        +  +++IL+ NAG      F  L+ ++ +    +  L 
Sbjct: 66  ----------CDLRKDLDLLFEKVKEVDILVLNAGGPKAGFFDELTNEDFKEAIDSLFLN 115

Query: 112 HFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRA--- 168
              +    L  MK+  +     GRI+ ++S     +    I  +        N  R    
Sbjct: 116 MIKIVRNYLPAMKE--KGW---GRIVAITS----FSVISPIE-NLYT----SNSARMALT 161

Query: 169 -YSQSKLANILHANELARRLKEDGVDITANSVHPGAIAT 206
            + ++       + E+A         IT N V PG   T
Sbjct: 162 GFLKTL------SFEVAPY------GITVNCVAPGWTET 188

>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A* Length = 265

 Score = 82.7 bits (205), Expect = 4e-19
 Identities = 50/220 (22%), Positives = 84/220 (38%), Gaps = 36/220 (16%)

Query: 1   MDI-----VITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDA 55
             +     VITG  SG+G  TA  L  +G   V+     + G+       K++       
Sbjct: 8   RSVKGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQ----AKKL-GNNCVF 62

Query: 56  MELDLSSLASVRNFASEYNIQHHQLNILINNAGI--------MGTPFMLSKDNIELQFAT 107
              D++S   V+   +    +  ++++ +N AGI        +      + ++ +     
Sbjct: 63  APADVTSEKDVQTALALAKGKFGRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDV 122

Query: 108 NHLGHFLLTNLLLDTMKKTARKSGGE-GRIINVSSEGHRLAYHEGIRFDKINDPSGYNGF 166
           N +G F +  L+   M +     GG+ G IIN +S    +A  EG             G 
Sbjct: 123 NLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTAS----VAAFEGQV-----------GQ 167

Query: 167 RAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIAT 206
            AYS SK   +     +AR L   G  I   ++ PG   T
Sbjct: 168 AAYSASKGGIVGMTLPIARDLAPIG--IRVMTIAPGLFGT 205

>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A* Length = 302

 Score = 83.0 bits (206), Expect = 5e-19
 Identities = 42/214 (19%), Positives = 72/214 (33%), Gaps = 40/214 (18%)

Query: 3   IVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSS 62
             ITG  +G+G     +L+  G   V+  R +   K   E I  +    KV A++ D+  
Sbjct: 29  AFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTG-NKVHAIQCDVRD 87

Query: 63  LASVRNFASEYNIQHHQLNILINNAGI-MGTPFM-LSKDNIELQFATNHLGHFLLTNLLL 120
              V+N  SE        NI+INNA     +P   LS +  +        G   +T  + 
Sbjct: 88  PDMVQNTVSELIKVAGHPNIVINNAAGNFISPTERLSPNAWKTITDIVLNGTAFVTLEIG 147

Query: 121 DTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFR---AYSQSKLANI 177
             +     K+      +++++                       G       + +K A +
Sbjct: 148 KQL----IKAQKGAAFLSITT------------------IYAETGSGFVVPSASAK-AGV 184

Query: 178 LH-----ANELARRLKEDGVDITANSVHPGAIAT 206
                  A E  +        +  N + PG I T
Sbjct: 185 EAMSKSLAAEWGKY------GMRFNVIQPGPIKT 212

>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp} Length = 294

 Score = 83.0 bits (206), Expect = 6e-19
 Identities = 50/208 (24%), Positives = 75/208 (36%), Gaps = 31/208 (14%)

Query: 4   VITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSA--KVDAMELDLS 61
           ++TG  SGIG   A   A  G  V +     A  +D ++     I     K   +  DLS
Sbjct: 53  LVTGGDSGIGRAAAIAYAREGADVAINYLP-AEEEDAQQV-KALIEECGRKAVLLPGDLS 110

Query: 62  SLASVRNFASEYNIQHHQLNILINNAGI--MGTPFM-LSKDNIELQFATNHLGHFLLTNL 118
             +  R+   +       L+IL   AG          L+ +  +  FA N    F +T  
Sbjct: 111 DESFARSLVHKAREALGGLDILALVAGKQTAIPEIKDLTSEQFQQTFAVNVFALFWITQE 170

Query: 119 LLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANIL 178
            +  + K     G    II  SS               I           Y+ +K A + 
Sbjct: 171 AIPLLPK-----G--ASIITTSS---------------IQAYQPSPHLLDYAATKAAILN 208

Query: 179 HANELARRLKEDGVDITANSVHPGAIAT 206
           ++  LA+++ E G  I  N V PG I T
Sbjct: 209 YSRGLAKQVAEKG--IRVNIVAPGPIWT 234

>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile} Length = 317

 Score = 83.1 bits (206), Expect = 6e-19
 Identities = 62/239 (25%), Positives = 97/239 (40%), Gaps = 49/239 (20%)

Query: 4   VITGATSGIGTETARVLALRGVHVVMGVRDIAAGK-----------DVKETIVKEIPSA- 51
            ITGA  G G   A  LA  G  +V    D+   +           ++KET V+ +    
Sbjct: 50  FITGAARGQGRTHAVRLAQDGADIV--AIDLCRQQPNLDYAQGSPEELKET-VRLVEEQG 106

Query: 52  -KVDAMELDLSSLASVRNFASEYNIQHHQLNILINNAGI--MGTPFMLSKDNIELQFATN 108
            ++ A + D+  LAS++    E   +   ++IL++N GI   G    L+         TN
Sbjct: 107 RRIIARQADVRDLASLQAVVDEALAEFGHIDILVSNVGISNQGEVVSLTDQQWSDILQTN 166

Query: 109 HLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRA 168
            +G +     +L +M +  +     G +I VSS         G+R        G  G   
Sbjct: 167 LIGAWHACRAVLPSMIERGQG----GSVIFVSSTV-------GLR--------GAPGQSH 207

Query: 169 YSQSK-----LANILHANELARRLKEDGVDITANSVHPGAIATNIIRHNSLFRSMNTIL 222
           Y+ SK     L   L ANE+ R       +I  NSV+PGA+ T +  +  L +     L
Sbjct: 208 YAASKHGVQGLMLSL-ANEVGRH------NIRVNSVNPGAVNTEMALNEKLLKMFLPHL 259

>1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A* Length = 254

 Score = 81.8 bits (203), Expect = 6e-19
 Identities = 36/211 (17%), Positives = 66/211 (31%), Gaps = 43/211 (20%)

Query: 4   VITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSL 63
           ++T      G  +A  L+  G  V           D       E+ +      +L   S 
Sbjct: 5   IVTNVKHFGGMGSALRLSEAGHTVA--------CHDESFKQKDELEAFAETYPQLKPMSE 56

Query: 64  ASVRNFASEYNIQHHQLNILINNAGIM--GTPFM-LSKDNIELQFATNHLGHFLLTNLLL 120
                        + Q+++L++N        P    + ++         +  F L N + 
Sbjct: 57  QEPAELIEAVTSAYGQVDVLVSNDIFAPEFQPIDKYAVEDYRGAVEALQIRPFALVNAVA 116

Query: 121 DTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSK-----LA 175
             MKK  RKS   G II ++S                     +     Y+ ++     LA
Sbjct: 117 SQMKK--RKS---GHIIFITS---------------ATPFGPWKELSTYTSARAGACTLA 156

Query: 176 NILHANELARRLKEDGVDITANSVHPGAIAT 206
           N L + EL         +I   ++ P  + +
Sbjct: 157 NAL-SKELGEY------NIPVFAIGPNYLHS 180

>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} Length = 256

 Score = 81.8 bits (203), Expect = 7e-19
 Identities = 52/219 (23%), Positives = 84/219 (38%), Gaps = 53/219 (24%)

Query: 4   VITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSA--KVDAMELDLS 61
            +TG   GIGT   + L   G  VV G          +   +++  +      A E ++ 
Sbjct: 17  YVTGGMGGIGTSICQRLHKDGFRVVAGC---GPNSPRRVKWLEDQKALGFDFYASEGNVG 73

Query: 62  SLASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNI-----ELQF----ATNHLGH 112
              S +    +   +  ++++L+NNAGI       ++D +        +     TN    
Sbjct: 74  DWDSTKQAFDKVKAEVGEIDVLVNNAGI-------TRDVVFRKMTREDWQAVIDTNLTSL 126

Query: 113 FLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQS 172
           F +T  ++D M +        GRIIN+SS               +N   G  G   YS +
Sbjct: 127 FNVTKQVIDGMVE-RGW----GRIINISS---------------VNGQKGQFGQTNYSTA 166

Query: 173 KLANIL-----HANELARRLKEDGVDITANSVHPGAIAT 206
           K A I       A E+A +       +T N+V PG I T
Sbjct: 167 K-AGIHGFTMSLAQEVATK------GVTVNTVSPGYIGT 198

>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP} Length = 255

 Score = 81.1 bits (201), Expect = 1e-18
 Identities = 37/222 (16%), Positives = 60/222 (27%), Gaps = 47/222 (21%)

Query: 4   VITGATSGIGTETARVLALRGVHVVM-GVRDIAAGKDVKETIVKEIPSAKVDAMELDLSS 62
            ITG+ SGIG     +LA  G  V+           D+        P  +  A+   L  
Sbjct: 5   AITGSASGIGAALKELLARAGHTVIGIDRGQADIEADLST------PGGRETAVAAVLDR 58

Query: 63  LAS-----VRNFASEYNIQHHQLNILINNAGIM----GTPFMLSKDNIELQFATNHLGHF 113
                   V          +  L + +N  G+     G    LS+           +   
Sbjct: 59  CGGVLDGLVCCAGVGVTAANSGLVVAVNYFGVSALLDGLAEALSRGQQPAAVIVGSIAAT 118

Query: 114 LLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSK 173
                 L  ++         G          +                      AY+ SK
Sbjct: 119 QPGAAELPMVEA-----MLAGDEARAIELAEQQG----------------QTHLAYAGSK 157

Query: 174 LANIL----HANELARRLKEDGVDITANSVHPGAIATNIIRH 211
            A       +  + A R       +  N V PGA+ T +++ 
Sbjct: 158 YAVTCLARRNVVDWAGR------GVRLNVVAPGAVETPLLQA 193

>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A* Length = 247

 Score = 80.6 bits (200), Expect = 2e-18
 Identities = 52/213 (24%), Positives = 86/213 (40%), Gaps = 44/213 (20%)

Query: 4   VITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSL 63
           ++TGA  GIG   A  LA  G  V++   +    K    +I       K  A+  D+S  
Sbjct: 10  LVTGAAQGIGKAIAARLAADGATVIVSDINAEGAKAAAASI-----GKKARAIAADISDP 64

Query: 64  ASVRNFASEYNIQHHQLNILINNAGIMG-TPFM-LSKDNIELQFATNHLGHFLLTNLLLD 121
            SV+   +E       ++IL+NNA I+    +  +  D+       N  G F++T    D
Sbjct: 65  GSVKALFAEIQALTGGIDILVNNASIVPFVAWDDVDLDHWRKIIDVNLTGTFIVTRAGTD 124

Query: 122 TMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFR---AYSQSKLANIL 178
            M+   +     GR+I+++S                   + + G     AY  +K   ++
Sbjct: 125 QMRAAGKA----GRVISIASN------------------TFFAGTPNMAAYVAAK-GGVI 161

Query: 179 -----HANELARRLKEDGVDITANSVHPGAIAT 206
                 A EL +       +ITAN+V PG I +
Sbjct: 162 GFTRALATELGKY------NITANAVTPGLIES 188

>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B} Length = 269

 Score = 80.7 bits (200), Expect = 2e-18
 Identities = 52/219 (23%), Positives = 83/219 (37%), Gaps = 53/219 (24%)

Query: 4   VITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSA--KVDAMELDLS 61
            +TG   G+G   +R L   G+ V +     +   D   T +     A     A  +D++
Sbjct: 29  FVTGGMGGLGAAISRRLHDAGMAVAVSH---SERNDHVSTWLMHERDAGRDFKAYAVDVA 85

Query: 62  SLASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNI-----ELQF----ATNHLGH 112
              S    A +      ++++LINNAGI       ++D       +  +     T+    
Sbjct: 86  DFESCERCAEKVLADFGKVDVLINNAGI-------TRDATFMKMTKGDWDAVMRTDLDAM 138

Query: 113 FLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQS 172
           F +T   +  M +  R     GRI+N+ S               +N   G  G   Y+ +
Sbjct: 139 FNVTKQFIAGMVE-RRF----GRIVNIGS---------------VNGSRGAFGQANYASA 178

Query: 173 KLANIL-----HANELARRLKEDGVDITANSVHPGAIAT 206
           K A I       A E A+R       IT N+V PG +AT
Sbjct: 179 K-AGIHGFTKTLALETAKR------GITVNTVSPGYLAT 210

>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens} Length = 264

 Score = 79.9 bits (198), Expect = 4e-18
 Identities = 56/223 (25%), Positives = 82/223 (36%), Gaps = 53/223 (23%)

Query: 4   VITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETI-----VKEIPSAKVDAMEL 58
           ++TGA SGIG   +  LA  G  V     D AA ++    +      +  P     A + 
Sbjct: 11  LVTGAGSGIGRAVSVRLAGEGATVAACDLDRAAAQETVRLLGGPGSKEGPPRGNHAAFQA 70

Query: 59  DLSSLASVRNFASEYNIQH-HQLNILINNAGIMGTPFMLSKDNI-----ELQF----ATN 108
           D+S   + R    +         +++++ AGI       ++D       E  +    A N
Sbjct: 71  DVSEARAARCLLEQVQACFSRPPSVVVSCAGI-------TQDEFLLHMSEDDWDKVIAVN 123

Query: 109 HLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRA 168
             G FL+T      +     +    G IIN+SS               I    G  G   
Sbjct: 124 LKGTFLVTQAAAQALVSNGCR----GSIINISS---------------IVGKVGNVGQTN 164

Query: 169 YSQSKLANIL-----HANELARRLKEDGVDITANSVHPGAIAT 206
           Y+ SK A ++      A EL R        I  NSV PG IAT
Sbjct: 165 YAASK-AGVIGLTQTAARELGRH------GIRCNSVLPGFIAT 200

>3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis} Length = 279

 Score = 80.3 bits (199), Expect = 5e-18
 Identities = 44/217 (20%), Positives = 75/217 (34%), Gaps = 39/217 (17%)

Query: 4   VITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSL 63
            +TG++ GIG   A   A  G  V +      A +  +             A + ++S  
Sbjct: 38  SVTGSSGGIGWAVAEAYAQAGADVAIWYNSHPADEKAEHLQKTY--GVHSKAYKCNISDP 95

Query: 64  ASVRNFASEYNIQHHQLNILINNAGI-MGTPFMLSKDNIEL---QFATNHLGHFLLTNLL 119
            SV    S+       +++ + NAG+       +  DN +      + +  G +  ++ +
Sbjct: 96  KSVEETISQQEKDFGTIDVFVANAGVTWTQGPEIDVDNYDSWNKIISVDLNGVYYCSHNI 155

Query: 120 LDTMKKTARKSGGEGRIINVSS-EGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANIL 178
               KK      G+G +I  SS  G             +N P        Y+ +K A   
Sbjct: 156 GKIFKKN-----GKGSLIITSSISGKI-----------VNIPQLQA---PYNTAK-AACT 195

Query: 179 H-----ANELARRLKEDGVDITANSVHPGAIATNIIR 210
           H     A E A            N++ PG I T+I  
Sbjct: 196 HLAKSLAIEWAPF-------ARVNTISPGYIDTDITD 225

>3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3q6i_A* 3m1l_A Length = 454

 Score = 80.8 bits (200), Expect = 8e-18
 Identities = 58/213 (27%), Positives = 84/213 (39%), Gaps = 44/213 (20%)

Query: 4   VITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSL 63
           V+TGA  GIG   A V A  G  VV             E + +        A+ LD+++ 
Sbjct: 217 VVTGAARGIGATIAEVFARDGATVV-----AIDVDGAAEDLKRVADKVGGTALTLDVTAD 271

Query: 64  ASVRNFASEYNIQH-HQLNILINNAGIMGTPFMLSKDNI-----ELQF----ATNHLGHF 113
            +V    +     H  +++IL+NNAGI  T     +D +     E ++    A N L   
Sbjct: 272 DAVDKITAHVTEHHGGKVDILVNNAGI--T-----RDKLLANMDEKRWDAVIAVNLLAPQ 324

Query: 114 LLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSK 173
            LT  L+             GR+I +SS               +   +G  G   Y+ +K
Sbjct: 325 RLTEGLVGNGTI-GEG----GRVIGLSS---------------MAGIAGNRGQTNYATTK 364

Query: 174 LANILHANELARRLKEDGVDITANSVHPGAIAT 206
              I  A  LA  L + G  IT N+V PG I T
Sbjct: 365 AGMIGLAEALAPVLADKG--ITINAVAPGFIET 395

>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} Length = 281

 Score = 79.1 bits (196), Expect = 1e-17
 Identities = 55/237 (23%), Positives = 86/237 (36%), Gaps = 54/237 (22%)

Query: 4   VITGATSGIGTETARVLALRGVHVVMGVRDIAAGK-----------DVKETIVKEIPSA- 51
           +ITG   G+G   A  LA  G  +   + D                D+ ET V  +    
Sbjct: 14  LITGGARGMGRSHAVALAEAGADIA--ICDRCENSDVVGYPLATADDLAET-VALVEKTG 70

Query: 52  -KVDAMELDLSSLASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQF----A 106
            +  + ++D+   A++ +F +E       ++I I NAGI  +   L  +    Q+     
Sbjct: 71  RRCISAKVDVKDRAALESFVAEAEDTLGGIDIAITNAGI--STIALLPEVESAQWDEVIG 128

Query: 107 TNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGF 166
           TN  G F     +   M K        GRI+ VSS         G               
Sbjct: 129 TNLTGTFNTIAAVAPGMIK-----RNYGRIVTVSSML-------GHS--------ANFAQ 168

Query: 167 RAYSQSK-----LANILHANELARRLKEDGVDITANSVHPGAIATNIIRHNSLFRSM 218
            +Y  SK     L     A++L          IT N+V PG I T +  ++ +F +M
Sbjct: 169 ASYVSSKWGVIGLTKCA-AHDLVGY------GITVNAVAPGNIETPMTHNDFVFGTM 218

>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A* Length = 291

 Score = 79.3 bits (196), Expect = 1e-17
 Identities = 42/245 (17%), Positives = 72/245 (29%), Gaps = 67/245 (27%)

Query: 4   VITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSA---KVDAMELDL 60
           ++TGA   +G   A  L   G  V +     AA       +   + +        ++ DL
Sbjct: 13  LVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAE---ANALSATLNARRPNSAITVQADL 69

Query: 61  SSLASVRNFASEYNIQHH-----------------QLNILINNAGIMG-TPFMLSKD--- 99
           S++A+     ++ +                     + ++L+NNA     TP + + +   
Sbjct: 70  SNVATAPVSGADGSAPVTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGH 129

Query: 100 ------------NIELQFATNHLGHFLLTNLLLDTMKKTARKSGGE-GRIINVSSEGHRL 146
                            F +N +  + L       +  T  K  G    IIN+       
Sbjct: 130 EPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAGTPAKHRGTNYSIINMVD----- 184

Query: 147 AYHEGIRFDKINDPSGYNGFRAYSQSKLANI-----LHANELARRLKEDGVDITANSVHP 201
                             G+  Y+ +K A         A ELA         I  N V P
Sbjct: 185 ----------AMTNQPLLGYTIYTMAKGALEGLTRSA-ALELAPL------QIRVNGVGP 227

Query: 202 GAIAT 206
           G    
Sbjct: 228 GLSVL 232

>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis} Length = 246

 Score = 77.9 bits (193), Expect = 2e-17
 Identities = 62/219 (28%), Positives = 96/219 (43%), Gaps = 53/219 (24%)

Query: 4   VITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSA--KVDAMELDLS 61
           ++TGA+ GIG   A  LA +G +VV+     A  +     +V EI        A+  D++
Sbjct: 8   LVTGASRGIGRAIAIDLAKQGANVVVNY---AGNEQKANEVVDEIKKLGSDAIAVRADVA 64

Query: 62  SLASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNI-----ELQF----ATNHLGH 112
           +   V N   +      Q++IL+NNAG+       +KDN+     E ++     TN  G 
Sbjct: 65  NAEDVTNMVKQTVDVFGQVDILVNNAGV-------TKDNLLMRMKEEEWDTVINTNLKGV 117

Query: 113 FLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQS 172
           FL T  +   M +  R     GRI+N++S               +   +G  G   Y  +
Sbjct: 118 FLCTKAVSRFMMR-QRH----GRIVNIAS---------------VVGVTGNPGQANYVAA 157

Query: 173 KLANIL-----HANELARRLKEDGVDITANSVHPGAIAT 206
           K A ++      A ELA R      +IT N++ PG IAT
Sbjct: 158 K-AGVIGLTKTSAKELASR------NITVNAIAPGFIAT 189

>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} Length = 273

 Score = 78.4 bits (194), Expect = 2e-17
 Identities = 52/213 (24%), Positives = 80/213 (37%), Gaps = 42/213 (19%)

Query: 4   VITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSA--KVDAMELDLS 61
           V+TGA SGIG   A   A  G HV+   R         + +  EI       +A+  DL+
Sbjct: 35  VVTGAGSGIGRAIAHGYARAGAHVLAWGRTDGV-----KEVADEIADGGGSAEAVVADLA 89

Query: 62  SLASVRNFASEYNIQHHQLNILINNAGI-MGTPFM-LSKDNIELQFATNHLGHFLLTNLL 119
            L    N A E      ++++L+NNAGI    P   +S          N    ++L+   
Sbjct: 90  DLEGAANVAEELA-ATRRVDVLVNNAGIIARAPAEEVSLGRWREVLTVNLDAAWVLSRSF 148

Query: 120 LDTMKKTARKSGGEGRIINVSS-EGHRLAYHEGIRFDKINDPSGYNGFRAYSQSK--LAN 176
              M        G GRI+ ++S    +                G     AY+ SK  +  
Sbjct: 149 GTAMLA-----HGSGRIVTIASMLSFQ----------------GGRNVAAYAASKHAVVG 187

Query: 177 I--LHANELARRLKEDGVDITANSVHPGAIATN 207
           +    A+E A R       +  N++ PG + T 
Sbjct: 188 LTRALASEWAGR------GVGVNALAPGYVVTA 214

>3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} PDB: 3gdf_A Length = 267

 Score = 78.0 bits (193), Expect = 2e-17
 Identities = 46/216 (21%), Positives = 73/216 (33%), Gaps = 39/216 (18%)

Query: 4   VITGA--TSGIGTETARVLALRGVHVVMG-VRDIAAGKDVKETIVKEIPSAKVDAMELDL 60
           V+TGA    G+G E AR  A  G  V +         ++  + + K     K  A +  +
Sbjct: 24  VVTGASGPKGMGIEAARGCAEMGAAVAITYASRAQGAEENVKELEKTYG-IKAKAYKCQV 82

Query: 61  SSLASVRNFASEYNIQHHQLNILINNAGI-MGTPFM-LSKDNIELQFATNHLGHFLLTNL 118
            S  S      +      Q++  I NAG    +  +  S +        +  G F     
Sbjct: 83  DSYESCEKLVKDVVADFGQIDAFIANAGATADSGILDGSVEAWNHVVQVDLNGTFHCAKA 142

Query: 119 LLDTMKKTARKSGGEGRIINVSS-EGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANI 177
           +    K+      G G ++  +S  GH             N P       +Y+ +K A  
Sbjct: 143 VGHHFKE-----RGTGSLVITASMSGH-----------IANFP---QEQTSYNVAK-AGC 182

Query: 178 LH-----ANELARRLKEDGVDITANSVHPGAIATNI 208
           +H     ANE              NS+ PG I T +
Sbjct: 183 IHMARSLANEWRDF-------ARVNSISPGYIDTGL 211

>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} PDB: 3sj7_A* Length = 246

 Score = 77.5 bits (192), Expect = 2e-17
 Identities = 60/219 (27%), Positives = 91/219 (41%), Gaps = 53/219 (24%)

Query: 4   VITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSA--KVDAMELDLS 61
           ++TGA+ GIG   A  LA  G +V +     A  K+  E +V+EI +      A++ +++
Sbjct: 8   LVTGASRGIGRSIALQLAEEGYNVAVNY---AGSKEKAEAVVEEIKAKGVDSFAIQANVA 64

Query: 62  SLASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNI-----ELQF----ATNHLGH 112
               V+    E   Q   L++L+NNAGI       ++DN+     E ++     TN  G 
Sbjct: 65  DADEVKAMIKEVVSQFGSLDVLVNNAGI-------TRDNLLMRMKEQEWDDVIDTNLKGV 117

Query: 113 FLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQS 172
           F         M +  R     G IIN+SS               +    G  G   Y  +
Sbjct: 118 FNCIQKATPQMLR-QRS----GAIINLSS---------------VVGAVGNPGQANYVAT 157

Query: 173 KLANIL-----HANELARRLKEDGVDITANSVHPGAIAT 206
           K A ++      A ELA R       IT N+V PG I +
Sbjct: 158 K-AGVIGLTKSAARELASR------GITVNAVAPGFIVS 189

>1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G Length = 244

 Score = 77.5 bits (192), Expect = 3e-17
 Identities = 57/219 (26%), Positives = 85/219 (38%), Gaps = 53/219 (24%)

Query: 4   VITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSA--KVDAMELDLS 61
           V+TGA+ GIG   A  L   G  V++     A      E + K+I +   +      D+S
Sbjct: 5   VVTGASRGIGKAIALSLGKAGCKVLVNY---ARSAKAAEEVSKQIEAYGGQAITFGGDVS 61

Query: 62  SLASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNI-----ELQF----ATNHLGH 112
             A V             +++++NNAGI       ++D +     + Q+      N  G 
Sbjct: 62  KEADVEAMMKTAIDAWGTIDVVVNNAGI-------TRDTLLIRMKKSQWDEVIDLNLTGV 114

Query: 113 FLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQS 172
           FL T      M K  RK    GRIIN++S               +    G  G   Y+ +
Sbjct: 115 FLCTQAATKIMMK-KRK----GRIINIAS---------------VVGLIGNIGQANYAAA 154

Query: 173 KLANIL-----HANELARRLKEDGVDITANSVHPGAIAT 206
           K A ++      A E A R      +I  N V PG IA+
Sbjct: 155 K-AGVIGFSKTAAREGASR------NINVNVVCPGFIAS 186

>1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2 Length = 242

 Score = 77.3 bits (191), Expect = 3e-17
 Identities = 51/211 (24%), Positives = 81/211 (38%), Gaps = 39/211 (18%)

Query: 3   IVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSS 62
            ++TG  SG+G   A  L  RG  VV+         D++           +  +E D++ 
Sbjct: 5   ALVTGGASGLGRAAALALKARGYRVVVL--------DLRRE------GEDLIYVEGDVTR 50

Query: 63  LASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSK------DNIELQFATNHLGHFLLT 116
              VR  A     +   L  +++ AG+     +L K      ++       N LG F + 
Sbjct: 51  EEDVRR-AVARAQEEAPLFAVVSAAGVGLAEKILGKEGPHGLESFRRVLEVNLLGTFNVL 109

Query: 117 NLLLDTMKKTARKSGGE-GRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLA 175
            L    M++    + G+ G I+N +S    +A  EG    +I       G  AY+ SK  
Sbjct: 110 RLAAWAMRENPPDAEGQRGVIVNTAS----VAAFEG----QI-------GQAAYAASKGG 154

Query: 176 NILHANELARRLKEDGVDITANSVHPGAIAT 206
            +      AR L   G  I   +V PG   T
Sbjct: 155 VVALTLPAARELAGWG--IRVVTVAPGLFDT 183

>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} Length = 247

 Score = 77.1 bits (191), Expect = 3e-17
 Identities = 59/218 (27%), Positives = 99/218 (45%), Gaps = 50/218 (22%)

Query: 3   IVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSS 62
            ++TGA+ GIG E A  LA +G  VV      A+ +  + ++ ++    K   + L++S 
Sbjct: 8   ALVTGASRGIGFEVAHALASKGATVVGTATSQASAEKFENSMKEK--GFKARGLVLNISD 65

Query: 63  LASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQ---------FATNHLGHF 113
           + S++NF +E   ++  ++IL+NNAGI       ++DN+ ++           TN    F
Sbjct: 66  IESIQNFFAEIKAENLAIDILVNNAGI-------TRDNLMMRMSEDEWQSVINTNLSSIF 118

Query: 114 LLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSK 173
            ++   +  M K  R     GRII++ S               +   +G  G   Y  +K
Sbjct: 119 RMSKECVRGMMK-KRW----GRIISIGS---------------VVGSAGNPGQTNYCAAK 158

Query: 174 LANIL-----HANELARRLKEDGVDITANSVHPGAIAT 206
            A ++      A E+A R      +IT N V PG IAT
Sbjct: 159 -AGVIGFSKSLAYEVASR------NITVNVVAPGFIAT 189

>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum} Length = 247

 Score = 77.1 bits (191), Expect = 4e-17
 Identities = 51/219 (23%), Positives = 85/219 (38%), Gaps = 53/219 (24%)

Query: 4   VITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSA--KVDAMELDLS 61
           ++TG++ G+G   A  L   G ++V+     +      +   +E  +A   V   + D+ 
Sbjct: 9   IVTGSSRGLGKAIAWKLGNMGANIVLNGSPASTSL---DATAEEFKAAGINVVVAKGDVK 65

Query: 62  SLASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNI-----ELQF----ATNHLGH 112
           +   V N          +++IL+NNAGI       ++D +     E  +     TN    
Sbjct: 66  NPEDVENMVKTAMDAFGRIDILVNNAGI-------TRDTLMLKMSEKDWDDVLNTNLKSA 118

Query: 113 FLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQS 172
           +L T  +   M K  +     G+IIN++S               I    G  G   Y+ S
Sbjct: 119 YLCTKAVSKIMLK-QKS----GKIINITS---------------IAGIIGNAGQANYAAS 158

Query: 173 KLANIL-----HANELARRLKEDGVDITANSVHPGAIAT 206
           K A ++      A E A +       I  N+V PG I T
Sbjct: 159 K-AGLIGFTKSIAKEFAAK------GIYCNAVAPGIIKT 190

>3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans} Length = 257

 Score = 77.3 bits (191), Expect = 4e-17
 Identities = 58/220 (26%), Positives = 86/220 (39%), Gaps = 40/220 (18%)

Query: 1   MDI-----VITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDA 55
           M+I     V+TG  SG+G  T + L   G  VV  V DI       E +V ++   +   
Sbjct: 5   MEIRDAVAVVTGGASGLGLATTKRLLDAGAQVV--VLDIRG-----EDVVADL-GDRARF 56

Query: 56  MELDLSSLASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNI--ELQFA----TNH 109
              D++  A+V + A +       L I++N AG      +LS+D +     F      N 
Sbjct: 57  AAADVTDEAAVAS-ALDLAETMGTLRIVVNCAGTGNAIRVLSRDGVFSLAAFRKIVDINL 115

Query: 110 LGHFLLTNLLLDTMKKT---ARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGF 166
           +G F +  L  + + KT      +   G IIN +S            FD      G  G 
Sbjct: 116 VGSFNVLRLAAERIAKTEPVGPNAEERGVIINTAS---------VAAFD------GQIGQ 160

Query: 167 RAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIAT 206
            AYS SK   +     +AR L      I   ++ PG   T
Sbjct: 161 AAYSASKGGVVGMTLPIARDLASHR--IRVMTIAPGLFDT 198

>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A* Length = 269

 Score = 77.2 bits (191), Expect = 4e-17
 Identities = 60/219 (27%), Positives = 91/219 (41%), Gaps = 53/219 (24%)

Query: 4   VITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSA--KVDAMELDLS 61
           ++TGA+ GIG   A  LA  G  V +     A+     + +V  I +A  +  A++ D+S
Sbjct: 32  LVTGASRGIGRAIALELAAAGAKVAVNY---ASSAGAADEVVAAIAAAGGEAFAVKADVS 88

Query: 62  SLASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNI-----ELQF----ATNHLGH 112
             + V    +    +  +L++L+NNAGI       ++D +        +      N  G 
Sbjct: 89  QESEVEALFAAVIERWGRLDVLVNNAGI-------TRDTLLLRMKRDDWQSVLDLNLGGV 141

Query: 113 FLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQS 172
           FL +      M K  R     GRIIN++S               +    G  G   YS +
Sbjct: 142 FLCSRAAAKIMLK-QRS----GRIINIAS---------------VVGEMGNPGQANYSAA 181

Query: 173 KLANIL-----HANELARRLKEDGVDITANSVHPGAIAT 206
           K A ++      A ELA R       IT N+V PG IAT
Sbjct: 182 K-AGVIGLTKTVAKELASR------GITVNAVAPGFIAT 213

>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei} Length = 270

 Score = 76.8 bits (190), Expect = 6e-17
 Identities = 54/217 (24%), Positives = 86/217 (39%), Gaps = 50/217 (23%)

Query: 4   VITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSL 63
           ++TGA+ GIG   A  LA RG  V+      A  + +     +     +     L+++  
Sbjct: 32  IVTGASRGIGRAIALELARRGAMVIGTATTEAGAEGIGAAFKQA--GLEGRGAVLNVNDA 89

Query: 64  ASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNI-----ELQF----ATNHLGHFL 114
            +V         +   LN+L+NNAGI       ++D +     + ++     TN    F 
Sbjct: 90  TAVDALVESTLKEFGALNVLVNNAGI-------TQDQLAMRMKDDEWDAVIDTNLKAVFR 142

Query: 115 LTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKL 174
           L+  +L  M K AR     GRI+N++S               +   +G  G   Y+ +K 
Sbjct: 143 LSRAVLRPMMK-ARG----GRIVNITS---------------VVGSAGNPGQVNYAAAK- 181

Query: 175 ANIL-----HANELARRLKEDGVDITANSVHPGAIAT 206
           A +       A E+  R       IT N V PG I T
Sbjct: 182 AGVAGMTRALAREIGSR------GITVNCVAPGFIDT 212

>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2 Length = 285

 Score = 76.8 bits (190), Expect = 7e-17
 Identities = 59/217 (27%), Positives = 91/217 (41%), Gaps = 50/217 (23%)

Query: 4   VITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSL 63
           ++TGA  GIG E A++LA    HV+   R   +   V + I       +      D+S  
Sbjct: 48  LVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSF--GYESSGYAGDVSKK 105

Query: 64  ASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNI-----ELQF----ATNHLGHFL 114
             +    ++   +H  ++IL+NNAGI       ++DN+       ++     TN    F 
Sbjct: 106 EEISEVINKILTEHKNVDILVNNAGI-------TRDNLFLRMKNDEWEDVLRTNLNSLFY 158

Query: 115 LTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKL 174
           +T  +   M    R     GRIIN+SS               I   +G  G   YS SK 
Sbjct: 159 ITQPISKRMIN-NRY----GRIINISS---------------IVGLTGNVGQANYSSSK- 197

Query: 175 ANIL-----HANELARRLKEDGVDITANSVHPGAIAT 206
           A ++      A ELA R      +IT N++ PG I++
Sbjct: 198 AGVIGFTKSLAKELASR------NITVNAIAPGFISS 228

>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2 Length = 245

 Score = 76.0 bits (188), Expect = 8e-17
 Identities = 46/217 (21%), Positives = 78/217 (35%), Gaps = 56/217 (25%)

Query: 4   VITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSL 63
           +ITGA  GIG  T  + A  G  +V    +    ++  E +           + +D++  
Sbjct: 9   LITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAV-------GAHPVVMDVADP 61

Query: 64  ASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNI-----ELQF----ATNHLGHFL 114
           ASV    +E      +L+ +++ AGI       ++DN         +      N  G FL
Sbjct: 62  ASVERGFAEALAHLGRLDGVVHYAGI-------TRDNFHWKMPLEDWELVLRVNLTGSFL 114

Query: 115 LTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKL 174
           +     + M++        G I+  +S          +         G  G   Y+ S  
Sbjct: 115 VAKAASEAMRE-KNP----GSIVLTASRV-------YL---------GNLGQANYAASM- 152

Query: 175 ANIL-----HANELARRLKEDGVDITANSVHPGAIAT 206
           A ++      A EL R        I  N++ PG I T
Sbjct: 153 AGVVGLTRTLALELGRW------GIRVNTLAPGFIET 183

>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} PDB: 3rsh_A* 3rro_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E Length = 248

 Score = 76.0 bits (188), Expect = 9e-17
 Identities = 56/217 (25%), Positives = 91/217 (41%), Gaps = 53/217 (24%)

Query: 4   VITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSL 63
           ++TGA+ GIG   A +LA RG  V+      +  + + + +           M L++++ 
Sbjct: 13  LVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYL-----GDNGKGMALNVTNP 67

Query: 64  ASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNI-----ELQF----ATNHLGHFL 114
            S+         +   ++IL+NNAGI       ++DN+     E ++     TN    F 
Sbjct: 68  ESIEAVLKAITDEFGGVDILVNNAGI-------TRDNLLMRMKEEEWSDIMETNLTSIFR 120

Query: 115 LTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKL 174
           L+  +L  M K  R+    GRIINV S               +    G  G   Y+ +K 
Sbjct: 121 LSKAVLRGMMK-KRQ----GRIINVGS---------------VVGTMGNAGQANYAAAK- 159

Query: 175 ANIL-----HANELARRLKEDGVDITANSVHPGAIAT 206
           A ++      A E+A R       +T N+V PG I T
Sbjct: 160 AGVIGFTKSMAREVASR------GVTVNTVAPGFIET 190

>2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8} Length = 245

 Score = 76.0 bits (188), Expect = 9e-17
 Identities = 52/220 (23%), Positives = 80/220 (36%), Gaps = 54/220 (24%)

Query: 4   VITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAM---ELDL 60
           +ITGA+ GIG   A  LA  G  + +        ++  E + +E        +     +L
Sbjct: 5   LITGASRGIGRAIALRLAEDGFALAIHY---GQNREKAEEVAEEARRRGSPLVAVLGANL 61

Query: 61  SSLASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNI-----ELQF----ATNHLG 111
               +      +       L+ L+NNAGI       ++D +     +  +      N   
Sbjct: 62  LEAEAATALVHQAAEVLGGLDTLVNNAGI-------TRDTLLVRMKDEDWEAVLEANLSA 114

Query: 112 HFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQ 171
            F  T   +  M K AR     GRI+N++S               +    G  G   Y  
Sbjct: 115 VFRTTREAVKLMMK-ARF----GRIVNITS---------------VVGILGNPGQANYVA 154

Query: 172 SKLANIL-----HANELARRLKEDGVDITANSVHPGAIAT 206
           SK A ++      A E A+R       IT N+V PG I T
Sbjct: 155 SK-AGLIGFTRAVAKEYAQR------GITVNAVAPGFIET 187

>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} Length = 264

 Score = 76.1 bits (188), Expect = 1e-16
 Identities = 48/218 (22%), Positives = 79/218 (36%), Gaps = 47/218 (21%)

Query: 4   VITGATSGIGTETARVLALRGVHVVM-GVRDIAAGKDVKETIVKEIPSAKVDAMELDLSS 62
           +IT  T G+G +    L  +G  V +    D  A + +KET        ++  ++ D++ 
Sbjct: 11  LITAGTKGLGKQVTEKLLAKGYSVTVTYHSDTTAMETMKETYKDV--EERLQFVQADVTK 68

Query: 63  LASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNI-----ELQF----ATNHLGHF 113
              +     E      +++ LINNAG         +        E ++      N    F
Sbjct: 69  KEDLHKIVEEAMSHFGKIDFLINNAGPYVF-----ERKKLVDYEEDEWNEMIQGNLTAVF 123

Query: 114 LLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSK 173
            L  L++  M+K        GRIIN   +G              +   G+    A++ +K
Sbjct: 124 HLLKLVVPVMRK-QNF----GRIINYGFQG-------------ADSAPGWIYRSAFAAAK 165

Query: 174 LANIL-----HANELARRLKEDGVDITANSVHPGAIAT 206
              ++      A E A         ITAN V PG I  
Sbjct: 166 -VGLVSLTKTVAYEEAEY------GITANMVCPGDIIG 196

>2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2 Length = 328

 Score = 77.1 bits (190), Expect = 1e-16
 Identities = 44/243 (18%), Positives = 73/243 (30%), Gaps = 63/243 (25%)

Query: 4   VITGATSGIGTETARVLALRGVHVVMG-VRDIAAGKDVKETIVKEIPSAKVDAMELDLSS 62
           ++TGA   +G   A  L   G  V +   R  A    +  T+    P      ++ DLS+
Sbjct: 50  LVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRP-NSAITVQADLSN 108

Query: 63  LASVRNFASEYNIQHH-----------------QLNILINNAGIMG-TPFMLSKD----- 99
           +A+     ++ +                     + ++L+NNA     TP + + +     
Sbjct: 109 VATAPVSGADGSAPVTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEP 168

Query: 100 ----------NIELQFATNHLGHFLLTNLLLDTMKKTARKSGGE-GRIINVSSEGHRLAY 148
                          F +N +  + L       +  T  K  G    IIN+         
Sbjct: 169 CVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAGTPAKHRGTNYSIINMVD------- 221

Query: 149 HEGIRFDKINDPSGYNGFRAYSQSKLANI-----LHANELARRLKEDGVDITANSVHPGA 203
                           G+  Y+ +K A         A ELA         I  N V PG 
Sbjct: 222 --------AMTNQPLLGYTIYTMAKGALEGLTRSA-ALELAPL------QIRVNGVGPGL 266

Query: 204 IAT 206
              
Sbjct: 267 SVL 269

>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A* Length = 291

 Score = 76.4 bits (189), Expect = 1e-16
 Identities = 53/211 (25%), Positives = 80/211 (37%), Gaps = 32/211 (15%)

Query: 4   VITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMEL--DLS 61
           +ITG  SGIG   +   A  G ++   +  +    D  ET  + +    V  + L  DLS
Sbjct: 51  LITGGDSGIGRAVSIAFAKEGANIA--IAYLDEEGDANET-KQYVEKEGVKCVLLPGDLS 107

Query: 62  SLASVRNFASEYNIQHHQLNILINNAGI--MGTPFM-LSKDNIELQFATNHLGHFLLTNL 118
                ++   E   Q   LNIL+NN            ++ + +E  F  N   +F +T  
Sbjct: 108 DEQHCKDIVQETVRQLGSLNILVNNVAQQYPQQGLEYITAEQLEKTFRINIFSYFHVTKA 167

Query: 119 LLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANIL 178
            L  +K+          IIN +S               I    G      YS +K A + 
Sbjct: 168 ALSHLKQG-------DVIINTAS---------------IVAYEGNETLIDYSATKGAIVA 205

Query: 179 HANELARRLKEDGVDITANSVHPGAIATNII 209
               L++ L + G  I  N V PG I T +I
Sbjct: 206 FTRSLSQSLVQKG--IRVNGVAPGPIWTPLI 234

>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A* Length = 248

 Score = 75.6 bits (187), Expect = 1e-16
 Identities = 60/220 (27%), Positives = 92/220 (41%), Gaps = 55/220 (25%)

Query: 4   VITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSA---KVDAMELDL 60
           ++TG+T GIG   A  LA  G  V++         +  + + +EI +    K   +E++L
Sbjct: 11  LVTGSTRGIGRAIAEKLASAGSTVII----TGTSGERAKAVAEEIANKYGVKAHGVEMNL 66

Query: 61  SSLASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNI-----ELQF----ATNHLG 111
            S  S+     E       ++IL+NNAGI       ++D +      L +      N  G
Sbjct: 67  LSEESINKAFEEIYNLVDGIDILVNNAGI-------TRDKLFLRMSLLDWEEVLKVNLTG 119

Query: 112 HFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQ 171
            FL+T   L  M K  R     GRI+N+SS               +   +G  G   YS 
Sbjct: 120 TFLVTQNSLRKMIK-QRW----GRIVNISS---------------VVGFTGNVGQVNYST 159

Query: 172 SKLANIL-----HANELARRLKEDGVDITANSVHPGAIAT 206
           +K A ++      A ELA R      ++  N+V PG I T
Sbjct: 160 TK-AGLIGFTKSLAKELAPR------NVLVNAVAPGFIET 192

>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A Length = 266

 Score = 74.9 bits (185), Expect = 3e-16
 Identities = 54/219 (24%), Positives = 85/219 (38%), Gaps = 55/219 (25%)

Query: 3   IVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSS 62
            ++TGAT GIG   AR    +G  V +        K++   +        V     +LS 
Sbjct: 30  ALVTGATGGIGEAIARCFHAQGAIVGLHGTREDKLKEIAADL-----GKDVFVFSANLSD 84

Query: 63  LASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQ---------FATNHLGHF 113
             S++  A     +   ++IL+NNAGI       ++D + ++          A N     
Sbjct: 85  RKSIKQLAEVAEREMEGIDILVNNAGI-------TRDGLFVRMQDQDWDDVLAVNLTAAS 137

Query: 114 LLTNLLLDTMKKTARKSGGEGRIINVSS-EGHRLAYHEGIRFDKINDPSGYNGFRAYSQS 172
            LT  L+ +M +  R     GRIIN++S  G                  G  G   Y  +
Sbjct: 138 TLTRELIHSMMR-RRY----GRIINITSIVGV----------------VGNPGQTNYCAA 176

Query: 173 KLANIL-----HANELARRLKEDGVDITANSVHPGAIAT 206
           K A ++      A E+A R      +IT N + PG I +
Sbjct: 177 K-AGLIGFSKALAQEIASR------NITVNCIAPGFIKS 208

>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} Length = 249

 Score = 74.5 bits (184), Expect = 3e-16
 Identities = 54/219 (24%), Positives = 86/219 (39%), Gaps = 59/219 (26%)

Query: 3   IVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSS 62
            +ITGA+SGIG+  AR+L   G  V++   +    K +   +              +L++
Sbjct: 17  SLITGASSGIGSAIARLLHKLGSKVIISGSNEEKLKSLGNAL-----KDNYTIEVCNLAN 71

Query: 63  LASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQ---------FATNHLGHF 113
                N  S+ +     L+IL+ NAGI       + D + ++            N   +F
Sbjct: 72  KEECSNLISKTS----NLDILVCNAGI-------TSDTLAIRMKDQDFDKVIDINLKANF 120

Query: 114 LLTNLLLDTMKKTARKSGGEGRIINVSS-EGHRLAYHEGIRFDKINDPSGYNGFRAYSQS 172
           +L    +  M +  R     GRIIN+SS  G                 +G  G   Y  S
Sbjct: 121 ILNREAIKKMIQ-KRY----GRIINISSIVGI----------------AGNPGQANYCAS 159

Query: 173 KLANIL-----HANELARRLKEDGVDITANSVHPGAIAT 206
           K A ++      + E+A R       IT N+V PG I +
Sbjct: 160 K-AGLIGMTKSLSYEVATR------GITVNAVAPGFIKS 191

>2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A Length = 239

 Score = 74.4 bits (184), Expect = 4e-16
 Identities = 42/211 (19%), Positives = 68/211 (32%), Gaps = 43/211 (20%)

Query: 4   VITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSL 63
           ++TG + GIG   A  L  RG  V +  R+                S     +  DL   
Sbjct: 6   LVTGGSRGIGRAIAEALVARGYRVAIASRNPEEAAQ----------SLGAVPLPTDLEK- 54

Query: 64  ASVRNFASEYNIQHHQLNILINNAGI-MGTPFM-LSKDNIELQFATNHLGHFLLTNLLLD 121
              +            L++L++ A + +  P + LS +        +    FLL      
Sbjct: 55  DDPKGLVKRALEALGGLHVLVHAAAVNVRKPALELSYEEWRRVLYLHLDVAFLLAQAAAP 114

Query: 122 TMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANILH-- 179
            M +      G GR++ + S    +               G     AY+ +K   +L   
Sbjct: 115 HMAE-----AGWGRVLFIGS----VTTFTA---------GGPVPIPAYTTAK-TALLGLT 155

Query: 180 ---ANELARRLKEDGVDITANSVHPGAIATN 207
              A E AR        I  N + PG + T 
Sbjct: 156 RALAKEWARL------GIRVNLLCPGYVETE 180

>2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor} Length = 253

 Score = 70.3 bits (173), Expect = 1e-14
 Identities = 54/217 (24%), Positives = 78/217 (35%), Gaps = 61/217 (28%)

Query: 4   VITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSL 63
           ++TG   GIG   AR  A  G  V +             T     P     A++ D++  
Sbjct: 25  LVTGGNRGIGLAIARAFADAGDKVAI-------------TYRSGEPPEGFLAVKCDITDT 71

Query: 64  ASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNI-----ELQF----ATNHLGHFL 114
             V     E    H  + +LI NAG+       +KD +     E  F     TN  G F 
Sbjct: 72  EQVEQAYKEIEETHGPVEVLIANAGV-------TKDQLLMRMSEEDFTSVVETNLTGTFR 124

Query: 115 LTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKL 174
           +       M + A+K    GR++ +SS               +    G  G   Y+ SK 
Sbjct: 125 VVKRANRAMLR-AKK----GRVVLISS---------------VVGLLGSAGQANYAASK- 163

Query: 175 ANIL-----HANELARRLKEDGVDITANSVHPGAIAT 206
           A ++      A EL  R      +IT N V PG + T
Sbjct: 164 AGLVGFARSLARELGSR------NITFNVVAPGFVDT 194

>1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A Length = 247

 Score = 70.3 bits (173), Expect = 1e-14
 Identities = 47/217 (21%), Positives = 80/217 (36%), Gaps = 61/217 (28%)

Query: 4   VITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSL 63
           ++TG   GIG   A+ LA  G  V +  R   A                +  +E+D++  
Sbjct: 19  LVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAP-------------KGLFGVEVDVTDS 65

Query: 64  ASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNI-----ELQF----ATNHLGHFL 114
            +V    +        + +L++NAG+       S D       E +F      N  G F 
Sbjct: 66  DAVDRAFTAVEEHQGPVEVLVSNAGL-------SADAFLMRMTEEKFEKVINANLTGAFR 118

Query: 115 LTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKL 174
           +      +M++  +     GR+I + S               ++   G      Y+ SK 
Sbjct: 119 VAQRASRSMQR-NKF----GRMIFIGS---------------VSGLWGIGNQANYAASK- 157

Query: 175 ANIL-----HANELARRLKEDGVDITANSVHPGAIAT 206
           A ++      A EL++       ++TAN V PG I T
Sbjct: 158 AGVIGMARSIARELSKA------NVTANVVAPGYIDT 188

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis} Length = 604

 Score = 72.0 bits (177), Expect = 1e-14
 Identities = 50/210 (23%), Positives = 87/210 (41%), Gaps = 36/210 (17%)

Query: 4   VITGATSGIGTETARVLALRGVHVV---MGVRDIAAGKDVK--ETIVKEIPSAKVDAMEL 58
           +ITGA  G+G   +   A  G  VV   +G      G + K  + +V EI      A+  
Sbjct: 12  IITGAGGGLGKYYSLEFAKLGAKVVVNDLGGALNGQGGNSKAADVVVDEIVKNGGVAV-- 69

Query: 59  DLSSLASVRNFAS--EYNIQHH-QLNILINNAGIM--GTPFMLSKDNIELQFATNHLGHF 113
             +   +V +     E  +++   ++++INNAGI+   +   +++ + +L    +  G F
Sbjct: 70  --ADYNNVLDGDKIVETAVKNFGTVHVIINNAGILRDASMKKMTEKDYKLVIDVHLNGAF 127

Query: 114 LLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSK 173
            +T       +K        GRI+N SS         G+         G  G   Y+ +K
Sbjct: 128 AVTKAAWPYFQKQ-----KYGRIVNTSSPA-------GLY--------GNFGQANYASAK 167

Query: 174 LANILHANELARRLKEDGVDITANSVHPGA 203
            A +  A  LA+   +    I AN++ P A
Sbjct: 168 SALLGFAETLAKEGAKYN--IKANAIAPLA 195

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis} Length = 604

 Score = 62.0 bits (151), Expect = 3e-11
 Identities = 54/209 (25%), Positives = 82/209 (39%), Gaps = 38/209 (18%)

Query: 1   MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDL 60
             ++ITGA +G+G E A+  A  G  VV  V D           V EI +A  +A     
Sbjct: 323 KVVLITGAGAGLGKEYAKWFAKYGAKVV--VNDFKDATKT----VDEIKAAGGEAW---- 372

Query: 61  SSLASVRNFAS---EYNIQHH-QLNILINNAGIM--GTPFMLSKDNIELQFATNHLGHFL 114
                V   +    +  I  +  ++IL+NNAGI+   +   +SK   +     + +G F 
Sbjct: 373 PDQHDVAKDSEAIIKNVIDKYGTIDILVNNAGILRDRSFAKMSKQEWDSVQQVHLIGTFN 432

Query: 115 LTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKL 174
           L+ L      +        GRIIN++S         GI         G  G   YS SK 
Sbjct: 433 LSRLAWPYFVEK-----QFGRIINITSTS-------GIY--------GNFGQANYSSSKA 472

Query: 175 ANILHANELARRLKEDGVDITANSVHPGA 203
             +  +  +A    ++   I  N V P A
Sbjct: 473 GILGLSKTMAIEGAKNN--IKVNIVAPHA 499

>3oml_A GH14720P, peroxisomal multifunctional enzyme type 2, CG3415; rossmann fold, hot-DOG fold, hydratase 2 motif, peroxisomes, oxidoreductase; 2.15A {Drosophila melanogaster} Length = 613

 Score = 69.1 bits (169), Expect = 1e-13
 Identities = 59/213 (27%), Positives = 87/213 (40%), Gaps = 40/213 (18%)

Query: 3   IVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVK-------ETIVKEIPSAKVDA 55
            V+TGA +G+G E A + A RG  VV  V D+              + +V EI  A  +A
Sbjct: 22  AVVTGAGAGLGREYALLFAERGAKVV--VNDLGGTHSGDGASQRAADIVVDEIRKAGGEA 79

Query: 56  MELDLSSLASVRNFAS--EYNIQHH-QLNILINNAGIM--GTPFMLSKDNIELQFATNHL 110
           +    +   SV + A   E  I+   +++IL+NNAGI+   +    S+ +  L    +  
Sbjct: 80  V----ADYNSVIDGAKVIETAIKAFGRVDILVNNAGILRDRSLVKTSEQDWNLVNDVHLK 135

Query: 111 GHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYS 170
           G F  T      MKK        GRII  SS         GI         G  G   Y+
Sbjct: 136 GSFKCTQAAFPYMKKQ-----NYGRIIMTSSNS-------GIY--------GNFGQVNYT 175

Query: 171 QSKLANILHANELARRLKEDGVDITANSVHPGA 203
            +K+  I  AN +A     +   +  N + P A
Sbjct: 176 AAKMGLIGLANTVAIEGARNN--VLCNVIVPTA 206

>1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A* Length = 319

 Score = 67.8 bits (166), Expect = 2e-13
 Identities = 52/208 (25%), Positives = 86/208 (41%), Gaps = 30/208 (14%)

Query: 4   VITGATSGIGTETARVLALRGVHVV---MGVRDIAAGKDVK--ETIVKEIPSAKVDAMEL 58
           ++TGA  G+G   A   A RG  VV   +G      GK     + +V+EI      A+  
Sbjct: 13  LVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRRGGKAV-A 71

Query: 59  DLSSLASVRNFASEYNIQHHQLNILINNAGIM--GTPFMLSKDNIELQFATNHLGHFLLT 116
           +  S+ +             ++++++NNAGI+   +   +S ++ ++    +  G F +T
Sbjct: 72  NYDSVEAGEKLVKTALDTFGRIDVVVNNAGILRDRSFSRISDEDWDIIQRVHLRGSFQVT 131

Query: 117 NLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLAN 176
               D MKK        GRII  +S         GI         G  G   YS +KL  
Sbjct: 132 RAAWDHMKKQ-----NYGRIIMTASAS-------GIY--------GNFGQANYSAAKLGL 171

Query: 177 ILHANELARRLKEDGVDITANSVHPGAI 204
           +  AN L    +++   I  N++ P A 
Sbjct: 172 LGLANTLVIEGRKNN--IHCNTIAPNAG 197

>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium} Length = 322

 Score = 65.5 bits (160), Expect = 1e-12
 Identities = 55/222 (24%), Positives = 89/222 (40%), Gaps = 50/222 (22%)

Query: 4   VITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVK--------ETIVKEIPSAKVDA 55
           ++TGA  GIG   A   A  G  VV  V DI  G D          +++V EI +A  +A
Sbjct: 31  IVTGAGGGIGRAHALAFAAEGARVV--VNDIGVGLDGSPASGGSAAQSVVDEITAAGGEA 88

Query: 56  MELDLSSLASVRNFASEYNI------QHHQLNILINNAGIM--GTPFMLSKDNIELQFAT 107
           +    +  ++V ++     +          L++L+NNAGI+        S++  +   A 
Sbjct: 89  V----ADGSNVADWDQAAGLIQTAVETFGGLDVLVNNAGIVRDRMIANTSEEEFDAVIAV 144

Query: 108 NHLGHFLLTNLLLDTMKKTARKSG-GEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGF 166
           +  GHF          +  ++     +GRIIN SS         G++        G  G 
Sbjct: 145 HLKGHFATMRHAAAYWRGLSKAGKAVDGRIINTSSGA-------GLQ--------GSVGQ 189

Query: 167 RAYSQSK-----LANILHANELARRLKEDGVDITANSVHPGA 203
             YS +K     L  +  A E+ R        +T N++ P A
Sbjct: 190 GNYSAAKAGIATLTLVG-AAEMGRY------GVTVNAIAPSA 224

>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A* Length = 287

 Score = 52.2 bits (125), Expect = 4e-08
 Identities = 14/86 (16%), Positives = 28/86 (32%), Gaps = 10/86 (11%)

Query: 3   IVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSS 62
            V+   T  +G  +A +LA  G  VV+  R +   +   +++ K        A   + + 
Sbjct: 122 AVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKRFKVNVTAA---ETAD 178

Query: 63  LASVRNFASEYNIQHHQLNILINNAG 88
            AS               + +     
Sbjct: 179 DASRAEAVKG-------AHFVFTAGA 197

>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa} Length = 342

 Score = 50.8 bits (122), Expect = 1e-07
 Identities = 34/210 (16%), Positives = 68/210 (32%), Gaps = 45/210 (21%)

Query: 1   MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDL 60
           +   + GAT  +G   AR +   G  +V+  R  +         ++ +   + +    ++
Sbjct: 14  VKYAVLGATGLLGHHAARAIRAAGHDLVLIHRPSSQ--------IQRLAYLEPECRVAEM 65

Query: 61  SSLASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLL 120
              A +              + +I +AG     +       + + A+        TN   
Sbjct: 66  LDHAGLERALRGL-------DGVIFSAG----YYPSRPRRWQEEVASALGQ----TNPFY 110

Query: 121 DTMKKTARKSGGEGRIINVSS------EGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKL 174
                   ++    RI+ V S          L  HEG+ +D +          +Y   K 
Sbjct: 111 A----ACLQARVP-RILYVGSAYAMPRHPQGLPGHEGLFYDSLPSGKS-----SYVLCKW 160

Query: 175 ANILHANELARRLKEDGVDITANSVHPGAI 204
           A     +E AR    +G+ +      PG +
Sbjct: 161 A----LDEQAREQARNGLPVVI--GIPGMV 184

>2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens} Length = 342

 Score = 45.5 bits (108), Expect = 7e-06
 Identities = 30/141 (21%), Positives = 51/141 (36%), Gaps = 14/141 (9%)

Query: 1   MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDL 60
           M I I GA   +G +  + L   G      V       DV +       S  VDA   DL
Sbjct: 15  MHIAIIGAAGMVGRKLTQRLVKDGSLGGKPVEKFTLI-DVFQPEAPAGFSGAVDARAADL 73

Query: 61  SSLASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLL 120
           S+                + +++ + A I+      ++ + +  +  N  G    T  L 
Sbjct: 74  SAPGEAEKLVE------ARPDVIFHLAAIVSGE---AELDFDKGYRINLDG----TRYLF 120

Query: 121 DTMKKTARKSGGEGRIINVSS 141
           D ++    K G + R++  SS
Sbjct: 121 DAIRIANGKDGYKPRVVFTSS 141

>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron} Length = 227

 Score = 43.2 bits (102), Expect = 2e-05
 Identities = 35/204 (17%), Positives = 55/204 (26%), Gaps = 43/204 (21%)

Query: 1   MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDL 60
             IV+ GA+  +G+        RG  V   VR     K   E          +   + D+
Sbjct: 5   KKIVLIGASGFVGSALLNEALNRGFEVTAVVRHPEKIKIENE---------HLKVKKADV 55

Query: 61  SSLASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLL 120
           SSL  V         +      +I+          +  + I+            +   ++
Sbjct: 56  SSLDEVCE-----VCKGAD--AVISAFNPGWNNPDIYDETIK------------VYLTII 96

Query: 121 DTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANILHA 180
           D +KK         R + V   G           D    P            K    L  
Sbjct: 97  DGVKKAGVN-----RFLMVGGAGSLFIAPGLRLMDSGEVPENI-----LPGVKA---LGE 143

Query: 181 NELARRLKEDGVDITANSVHPGAI 204
             L   +KE  +D       P A 
Sbjct: 144 FYLNFLMKEKEIDWV--FFSPAAD 165

>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans} Length = 236

 Score = 42.7 bits (101), Expect = 4e-05
 Identities = 11/48 (22%), Positives = 21/48 (43%)

Query: 1  MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEI 48
          M +++ GA   +       L  +G   V  VR+   G +++E    +I
Sbjct: 22 MRVLVVGANGKVARYLLSELKNKGHEPVAMVRNEEQGPELRERGASDI 69

>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A* Length = 206

 Score = 41.9 bits (99), Expect = 6e-05
 Identities = 15/68 (22%), Positives = 20/68 (29%), Gaps = 8/68 (11%)

Query: 1  MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDL 60
            I I GAT   G  T       G  V + VRD +         +          +  D+
Sbjct: 4  KKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSR--------LPSEGPRPAHVVVGDV 55

Query: 61 SSLASVRN 68
             A V  
Sbjct: 56 LQAADVDK 63

>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp} Length = 289

 Score = 41.5 bits (98), Expect = 1e-04
 Identities = 17/68 (25%), Positives = 28/68 (41%), Gaps = 9/68 (13%)

Query: 1  MDIVITGATSGIGTETARVLALRGVH-VVMGVRDIAAGKDVKETIVKEIPSAKVDAMELD 59
          M+I++TGAT  +GT          +    +GVR++    D            KV   +LD
Sbjct: 1  MNIMLTGATGHLGTHITNQAIANHIDHFHIGVRNVEKVPDDWR--------GKVSVRQLD 52

Query: 60 LSSLASVR 67
            +  S+ 
Sbjct: 53 YFNQESMV 60

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 42.1 bits (98), Expect = 1e-04
 Identities = 51/342 (14%), Positives = 102/342 (29%), Gaps = 116/342 (33%)

Query: 3   IVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETI--------VKEIPSAKVD 54
           I++T     +   T  + A    H+ +    +    D  +++         +++P   + 
Sbjct: 268 ILLTTRFKQV---TDFLSAATTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQDLPREVLT 324

Query: 55  AMELDLSSL-ASVRNFASEY-NIQH--------------------------HQLNILINN 86
                LS +  S+R+  + + N +H                           +L++   +
Sbjct: 325 TNPRRLSIIAESIRDGLATWDNWKHVNCDKLTTIIESSLNVLEPAEYRKMFDRLSVFPPS 384

Query: 87  AGIMGTPFMLS-----KDNIELQFATNHLGHFLLTN------------LLLDTMKKTARK 129
           A I     +LS         ++    N L  + L              + L+   K   +
Sbjct: 385 AHI--PTILLSLIWFDVIKSDVMVVVNKLHKYSLVEKQPKESTISIPSIYLELKVKLENE 442

Query: 130 SGGEGRIINVSSEGHRLAYHEGIRFDKINDPS-----GYNGFRAYSQSKLANILHANE-- 182
                 I++         Y+    FD  +D        Y  F ++    L NI H     
Sbjct: 443 YALHRSIVD--------HYNIPKTFDS-DDLIPPYLDQY--FYSHIGHHLKNIEHPERMT 491

Query: 183 -----------LARRLKEDGVDITANSVHPGAIATN----------IIRHNSLF-RSMNT 220
                      L ++++ D     A     G+I             I  ++  + R +N 
Sbjct: 492 LFRMVFLDFRFLEQKIRHDSTAWNA----SGSILNTLQQLKFYKPYICDNDPKYERLVNA 547

Query: 221 ILHALPGIAGKCLL---KNVQQVILNF-----------QKQR 248
           IL  LP I    +     ++ ++ L             Q QR
Sbjct: 548 ILDFLPKIEENLICSKYTDLLRIALMAEDEAIFEEAHKQVQR 589

>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334} Length = 224

 Score = 41.2 bits (96), Expect = 1e-04
 Identities = 19/66 (28%), Positives = 26/66 (39%)

Query: 1  MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDL 60
          M I + GAT   G+        RG  V+  VRD     D     V  +    +   E DL
Sbjct: 1  MKIAVLGATGRAGSAIVAEARRRGHEVLAVVRDPQKAADRLGATVATLVKEPLVLTEADL 60

Query: 61 SSLASV 66
           S+ +V
Sbjct: 61 DSVDAV 66

>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D Length = 287

 Score = 40.0 bits (94), Expect = 3e-04
 Identities = 12/69 (17%), Positives = 26/69 (37%), Gaps = 10/69 (14%)

Query: 1  MDIVITGATSGIGTETARVLALR--GVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMEL 58
            I +TGAT  +G    + L  +     ++  VR++     + +          V+    
Sbjct: 1  FSIAVTGATGQLGGLVIQHLLKKVPASQIIAIVRNVEKASTLAD--------QGVEVRHG 52

Query: 59 DLSSLASVR 67
          D +   S++
Sbjct: 53 DYNQPESLQ 61

>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A} Length = 236

 Score = 39.4 bits (92), Expect = 4e-04
 Identities = 10/68 (14%), Positives = 24/68 (35%), Gaps = 9/68 (13%)

Query: 1  MDIVITGATSGIGTETARVLALR-GVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELD 59
           +++I GA   I       LA +  +   +  R  A         + +        +  D
Sbjct: 24 KNVLILGAGGQIARHVINQLADKQTIKQTLFARQPAK--------IHKPYPTNSQIIMGD 75

Query: 60 LSSLASVR 67
          + + A+++
Sbjct: 76 VLNHAALK 83

>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp} Length = 219

 Score = 39.2 bits (92), Expect = 5e-04
 Identities = 9/42 (21%), Positives = 15/42 (35%)

Query: 1  MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKE 42
          M I I G+T  +G    + L+     +  G R +        
Sbjct: 1  MKIFIVGSTGRVGKSLLKSLSTTDYQIYAGARKVEQVPQYNN 42

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	251
4fn4_A	254	Short chain dehydrogenase; NADH-binding, rossmann	100.0
4g81_D	255	Putative hexonate dehydrogenase; enzyme function i	100.0
4fgs_A	273	Probable dehydrogenase protein; PSI-biology, nysgr	100.0
4gkb_A	258	3-oxoacyl-[acyl-carrier protein] reductase; putati	100.0
4b79_A	242	PA4098, probable short-chain dehydrogenase; oxidor	100.0
3ged_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	100.0
4hp8_A	247	2-deoxy-D-gluconate 3-dehydrogenase; enzyme functi	100.0
4fs3_A	256	Enoyl-[acyl-carrier-protein] reductase [NADPH] FA;	100.0
4h15_A	261	Short chain alcohol dehydrogenase-related dehydro;	100.0
3gaf_A	256	7-alpha-hydroxysteroid dehydrogenase; seattle stru	100.0
3op4_A	248	3-oxoacyl-[acyl-carrier protein] reductase; 3-keto	100.0
3h7a_A	252	Short chain dehydrogenase; oxidoreductase, PSI-2,	100.0
3lf2_A	265	Short chain oxidoreductase Q9HYA2; SDR, SCOR, ross	100.0
3l6e_A	235	Oxidoreductase, short-chain dehydrogenase/reducta;	100.0
3nyw_A	250	Putative oxidoreductase; fatty acid synthesis,3-ox	100.0
3oid_A	258	Enoyl-[acyl-carrier-protein] reductase [NADPH]; fa	100.0
3pk0_A	262	Short-chain dehydrogenase/reductase SDR; ssgcid, s	100.0
3rwb_A	247	TPLDH, pyridoxal 4-dehydrogenase; short chain dehy	100.0
3ftp_A	270	3-oxoacyl-[acyl-carrier protein] reductase; ssgcid	100.0
3osu_A	246	3-oxoacyl-[acyl-carrier-protein] reductase; struct	100.0
3tfo_A	264	Putative 3-oxoacyl-(acyl-carrier-protein) reducta;	100.0
3s55_A	281	Putative short-chain dehydrogenase/reductase; stru	100.0
3tzq_B	271	Short-chain type dehydrogenase/reductase; ssgcid,	100.0
4ibo_A	271	Gluconate dehydrogenase; enzyme function initiativ	100.0
4dqx_A	277	Probable oxidoreductase protein; structural genomi	100.0
3v8b_A	283	Putative dehydrogenase, possibly 3-oxoacyl-[acyl-	100.0
3pgx_A	280	Carveol dehydrogenase; structural genomics, seattl	100.0
3rku_A	287	Oxidoreductase YMR226C; substrate fingerprint, sho	100.0
3ucx_A	264	Short chain dehydrogenase; ssgcid, seattle structu	100.0
3tsc_A	277	Putative oxidoreductase; structural genomics, seat	100.0
3sju_A	279	Keto reductase; short-chain dehydrogenase, oxidore	100.0
3uve_A	286	Carveol dehydrogenase ((+)-trans-carveol dehydrog;	100.0
3tox_A	280	Short chain dehydrogenase; structural genomics, PS	100.0
4egf_A	266	L-xylulose reductase; structural genomics, ssgcid,	100.0
3imf_A	257	Short chain dehydrogenase; structural genomics, in	100.0
4e6p_A	259	Probable sorbitol dehydrogenase (L-iditol 2-dehyd;	100.0
4dyv_A	272	Short-chain dehydrogenase/reductase SDR; structura	100.0
3grp_A	266	3-oxoacyl-(acyl carrierprotein) reductase; structu	100.0
3svt_A	281	Short-chain type dehydrogenase/reductase; ssgcid,	100.0
3t7c_A	299	Carveol dehydrogenase; structural genomics, seattl	100.0
4eso_A	255	Putative oxidoreductase; NADP, structural genomics	100.0
3v2h_A	281	D-beta-hydroxybutyrate dehydrogenase; structural g	100.0
2jah_A	247	Clavulanic acid dehydrogenase; short-chain dehydro	100.0
4dmm_A	269	3-oxoacyl-[acyl-carrier-protein] reductase; rossma	100.0
3rih_A	293	Short chain dehydrogenase or reductase; structural	100.0
3r1i_A	276	Short-chain type dehydrogenase/reductase; structur	100.0
3gvc_A	277	Oxidoreductase, probable short-chain type dehydrog	100.0
3u5t_A	267	3-oxoacyl-[acyl-carrier-protein] reductase; struct	100.0
4dry_A	281	3-oxoacyl-[acyl-carrier-protein] reductase; struct	100.0
3lyl_A	247	3-oxoacyl-(acyl-carrier-protein) reductase; alpha	100.0
3tjr_A	301	Short chain dehydrogenase; structural genomics, se	100.0
1iy8_A	267	Levodione reductase; oxidoreductase; HET: NAD; 1.6	100.0
4fc7_A	277	Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossman	100.0
3p19_A	266	BFPVVD8, putative blue fluorescent protein; rossma	100.0
3asu_A	248	Short-chain dehydrogenase/reductase SDR; SDR famil	100.0
2uvd_A	246	3-oxoacyl-(acyl-carrier-protein) reductase; beta-k	100.0
4da9_A	280	Short-chain dehydrogenase/reductase; structural ge	100.0
1ae1_A	273	Tropinone reductase-I; oxidoreductase, tropane alk	100.0
3sx2_A	278	Putative 3-ketoacyl-(acyl-carrier-protein) reduct;	100.0
3f1l_A	252	Uncharacterized oxidoreductase YCIK; E. coli, NADP	100.0
2ae2_A	260	Protein (tropinone reductase-II); oxidoreductase,	100.0
3e03_A	274	Short chain dehydrogenase; structural genomics, PS	100.0
3o38_A	266	Short chain dehydrogenase; tuberculosis, ortholog	100.0
3ezl_A	256	Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA	100.0
3tpc_A	257	Short chain alcohol dehydrogenase-related dehydro;	100.0
4imr_A	275	3-oxoacyl-(acyl-carrier-protein) reductase; oxidor	100.0
3oec_A	317	Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO;	100.0
3kzv_A	254	Uncharacterized oxidoreductase YIR035C; cytoplasmi	100.0
3is3_A	270	17BETA-hydroxysteroid dehydrogenase; short chain d	100.0
3v2g_A	271	3-oxoacyl-[acyl-carrier-protein] reductase; struct	100.0
1geg_A	256	Acetoin reductase; SDR family, oxidoreductase; HET	100.0
3a28_C	258	L-2.3-butanediol dehydrogenase; chiral substrate r	100.0
3t4x_A	267	Oxidoreductase, short chain dehydrogenase/reducta;	100.0
3gk3_A	269	Acetoacetyl-COA reductase; acetoacetyl-CO reductas	100.0
1x1t_A	260	D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, S	100.0
1zem_A	262	Xylitol dehydrogenase; rossmann fold, dinucleotide	100.0
3rkr_A	262	Short chain oxidoreductase; rossmann fold; HET: NA	100.0
3ioy_A	319	Short-chain dehydrogenase/reductase SDR; structura	100.0
3cxt_A	291	Dehydrogenase with different specificities; rossma	100.0
3qiv_A	253	Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR	100.0
2ew8_A	249	(S)-1-phenylethanol dehydrogenase; transferase; 2.	100.0
1vl8_A	267	Gluconate 5-dehydrogenase; TM0441, structural geno	100.0
3ksu_A	262	3-oxoacyl-acyl carrier protein reductase; structur	100.0
3n74_A	261	3-ketoacyl-(acyl-carrier-protein) reductase; seatt	100.0
3uf0_A	273	Short-chain dehydrogenase/reductase SDR; gluconate	100.0
3gem_A	260	Short chain dehydrogenase; structural genomics, AP	100.0
3sc4_A	285	Short chain dehydrogenase (A0QTM2 homolog); ssgcid	100.0
2z1n_A	260	Dehydrogenase; reductase, SDR, oxidoreductase; 1.8	100.0
1e7w_A	291	Pteridine reductase; dihydrofolate reductase, shor	100.0
4iin_A	271	3-ketoacyl-acyl carrier protein reductase (FABG);	100.0
3ijr_A	291	Oxidoreductase, short chain dehydrogenase/reducta;	100.0
3ai3_A	263	NADPH-sorbose reductase; rossmann-fold, NADPH-depe	100.0
3dii_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	100.0
2zat_A	260	Dehydrogenase/reductase SDR family member 4; alpha	100.0
3edm_A	259	Short chain dehydrogenase; structural genomics, ox	100.0
1hdc_A	254	3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxi	100.0
3k31_A	296	Enoyl-(acyl-carrier-protein) reductase; ssgcid, NI	100.0
3i1j_A	247	Oxidoreductase, short chain dehydrogenase/reducta;	100.0
2b4q_A	276	Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier	100.0
2nwq_A	272	Probable short-chain dehydrogenase; oxidoreductase	100.0
3l77_A	235	Short-chain alcohol dehydrogenase; oxidoreductase;	100.0
1nff_A	260	Putative oxidoreductase RV2002; directed evolution	100.0
1uls_A	245	Putative 3-oxoacyl-acyl carrier protein reductase;	100.0
3m1a_A	281	Putative dehydrogenase; short, PSI, MCSG, structur	100.0
3grk_A	293	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	100.0
1xkq_A	280	Short-chain reductase family member (5D234); parra	100.0
3pxx_A	287	Carveol dehydrogenase; structural genomics, seattl	100.0
1xhl_A	297	Short-chain dehydrogenase/reductase family member	100.0
3zv4_A	281	CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; ox	100.0
2rhc_B	277	Actinorhodin polyketide ketoreductase; oxidoreduct	100.0
4e3z_A	272	Putative oxidoreductase protein; PSI-biology, stru	100.0
1oaa_A	259	Sepiapterin reductase; tetrahydrobiopterin, oxidor	100.0
3r3s_A	294	Oxidoreductase; structural genomics, csgid, center	100.0
3oig_A	266	Enoyl-[acyl-carrier-protein] reductase [NADH]; fat	100.0
4iiu_A	267	3-oxoacyl-[acyl-carrier protein] reductase; struct	100.0
3qlj_A	322	Short chain dehydrogenase; structural genomics, se	100.0
2q2v_A	255	Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidore	100.0
2qq5_A	260	DHRS1, dehydrogenase/reductase SDR family member 1	100.0
3i4f_A	264	3-oxoacyl-[acyl-carrier protein] reductase; struct	100.0
3u9l_A	324	3-oxoacyl-[acyl-carrier-protein] reductase; struct	100.0
2qhx_A	328	Pteridine reductase 1; oxidoreductase, short-chain	100.0
2x9g_A	288	PTR1, pteridine reductase; short chain dehydrogena	100.0
3vtz_A	269	Glucose 1-dehydrogenase; rossmann fold, oxidoreduc	100.0
2d1y_A	256	Hypothetical protein TT0321; strucrtural genomics,	100.0
1hxh_A	253	3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-b	100.0
3ek2_A	271	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	100.0
1spx_A	278	Short-chain reductase family member (5L265); paral	100.0
3tl3_A	257	Short-chain type dehydrogenase/reductase; ssgcid,	100.0
3un1_A	260	Probable oxidoreductase; structural genomics, PSI-	100.0
3nrc_A	280	Enoyl-[acyl-carrier-protein] reductase (NADH); ros	100.0
3uxy_A	266	Short-chain dehydrogenase/reductase SDR; structura	100.0
3kvo_A	346	Hydroxysteroid dehydrogenase-like protein 2; HSDL2	100.0
1mxh_A	276	Pteridine reductase 2; SDR topology, protein-subst	100.0
3o26_A	311	Salutaridine reductase; short chain dehydrogenase/	100.0
2bd0_A	244	Sepiapterin reductase; oxidoreductase; HET: NAP BI	100.0
2pd4_A	275	Enoyl-[acyl-carrier-protein] reductase [NADH]; ant	100.0
3f9i_A	249	3-oxoacyl-[acyl-carrier-protein] reductase; 3-keto	100.0
3ak4_A	263	NADH-dependent quinuclidinone reductase; SDR, (R)-	100.0
3gdg_A	267	Probable NADP-dependent mannitol dehydrogenase; ro	100.0
3guy_A	230	Short-chain dehydrogenase/reductase SDR; structura	100.0
2p91_A	285	Enoyl-[acyl-carrier-protein] reductase [NADH]; NAD	100.0
1yde_A	270	Retinal dehydrogenase/reductase 3; oxidoreductase,	100.0
2cfc_A	250	2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidor	100.0
3ppi_A	281	3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, de	100.0
3rd5_A	291	Mypaa.01249.C; ssgcid, structural genomics, seattl	100.0
3icc_A	255	Putative 3-oxoacyl-(acyl carrier protein) reducta;	100.0
2a4k_A	263	3-oxoacyl-[acyl carrier protein] reductase; reduct	100.0
2nm0_A	253	Probable 3-oxacyl-(acyl-carrier-protein) reductas;	100.0
2ekp_A	239	2-deoxy-D-gluconate 3-dehydrogenase; structural ge	100.0
3awd_A	260	GOX2181, putative polyol dehydrogenase; oxidoreduc	100.0
1qsg_A	265	Enoyl-[acyl-carrier-protein] reductase; enoyl redu	100.0
2wyu_A	261	Enoyl-[acyl carrier protein] reductase; oxidoreduc	100.0
2fwm_X	250	2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; e	100.0
1g0o_A	283	Trihydroxynaphthalene reductase; protein-NADPH-act	100.0
1edo_A	244	Beta-keto acyl carrier protein reductase; nucleoti	100.0
1fmc_A	255	7 alpha-hydroxysteroid dehydrogenase; short-chain	100.0
1xq1_A	266	Putative tropinone reducatse; structural genomics,	100.0
1gee_A	261	Glucose 1-dehydrogenase; short-chain dehydrogenase	100.0
2c07_A	285	3-oxoacyl-(acyl-carrier protein) reductase; oxidor	100.0
2gdz_A	267	NAD+-dependent 15-hydroxyprostaglandin dehydrogen;	100.0
1uzm_A	247	3-oxoacyl-[acyl-carrier protein] reductase; beta-k	100.0
1zmo_A	244	Halohydrin dehalogenase; haloalcohol dehalogenase,	100.0
2ehd_A	234	Oxidoreductase, oxidoreductase, short-chain dehydr	100.0
1yb1_A	272	17-beta-hydroxysteroid dehydrogenase type XI; shor	100.0
2o23_A	265	HADH2 protein; HSD17B10, schad, ERAB, type II HADH	100.0
3zu3_A	405	Putative reductase YPO4104/Y4119/YP_4011; oxidored	100.0
1xg5_A	279	ARPG836; short chain dehydrogenase, human, SGC, st	100.0
1zk4_A	251	R-specific alcohol dehydrogenase; short chain redu	100.0
2pnf_A	248	3-oxoacyl-[acyl-carrier-protein] reductase; short	100.0
2pd6_A	264	Estradiol 17-beta-dehydrogenase 8; short-chain deh	100.0
1h5q_A	265	NADP-dependent mannitol dehydrogenase; oxidoreduct	100.0
2hq1_A	247	Glucose/ribitol dehydrogenase; CTH-1438, structura	100.0
2h7i_A	269	Enoyl-[acyl-carrier-protein] reductase [NADH]; oxi	100.0
2ph3_A	245	3-oxoacyl-[acyl carrier protein] reductase; TTHA04	100.0
1zmt_A	254	Haloalcohol dehalogenase HHEC; halohydrin dehaloge	100.0
3s8m_A	422	Enoyl-ACP reductase; rossmann fold, oxidoreductase	100.0
4e4y_A	244	Short chain dehydrogenase family protein; structur	100.0
2wsb_A	254	Galactitol dehydrogenase; oxidoreductase, SDR, ros	100.0
2ag5_A	246	DHRS6, dehydrogenase/reductase (SDR family) member	100.0
1jtv_A	327	17 beta-hydroxysteroid dehydrogenase type 1; stero	100.0
1sby_A	254	Alcohol dehydrogenase; ternary complex, NAD, trifl	100.0
2bgk_A	278	Rhizome secoisolariciresinol dehydrogenase; oxidor	100.0
2dtx_A	264	Glucose 1-dehydrogenase related protein; rossmann	100.0
1xu9_A	286	Corticosteroid 11-beta-dehydrogenase, isozyme 1; h	100.0
3afn_B	258	Carbonyl reductase; alpha/beta/alpha, rossmann-fol	100.0
1w6u_A	302	2,4-dienoyl-COA reductase, mitochondrial precursor	100.0
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	100.0
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	100.0
1yo6_A	250	Putative carbonyl reductase sniffer; tyrosine-depe	100.0
1gz6_A	319	Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MF	100.0
1yxm_A	303	Pecra, peroxisomal trans 2-enoyl COA reductase; pe	100.0
3lt0_A	329	Enoyl-ACP reductase; triclosan, triclosan variant,	100.0
3ctm_A	279	Carbonyl reductase; alcohol dehydrogenase, short-c	100.0
1dhr_A	241	Dihydropteridine reductase; oxidoreductase(acting	100.0
3d3w_A	244	L-xylulose reductase; uronate cycle, short-chain d	100.0
3orf_A	251	Dihydropteridine reductase; alpha-beta-alpha sandw	100.0
3e9n_A	245	Putative short-chain dehydrogenase/reductase; stru	100.0
3uce_A	223	Dehydrogenase; rossmann fold, oxidoreductase; HET:	100.0
1ooe_A	236	Dihydropteridine reductase; structural genomics, P	100.0
1sny_A	267	Sniffer CG10964-PA; alpha and beta protein, rossma	100.0
3u0b_A	454	Oxidoreductase, short chain dehydrogenase/reducta	100.0
1cyd_A	244	Carbonyl reductase; short-chain dehydrogenase, oxi	100.0
1ja9_A	274	4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; p	100.0
1wma_A	276	Carbonyl reductase [NADPH] 1; oxidoreductase; HET:	100.0
4eue_A	418	Putative reductase CA_C0462; TER, biofuel, synthet	100.0
1o5i_A	249	3-oxoacyl-(acyl carrier protein) reductase; TM1169	100.0
3oml_A	613	GH14720P, peroxisomal multifunctional enzyme type	100.0
2o2s_A	315	Enoyl-acyl carrier reductase; enoyl reductase, tri	100.0
1d7o_A	297	Enoyl-[acyl-carrier protein] reductase (NADH) PRE;	100.0
1uay_A	242	Type II 3-hydroxyacyl-COA dehydrogenase; beta oxid	100.0
2ptg_A	319	Enoyl-acyl carrier reductase; apicomplexa, enoyl (	99.98
1fjh_A	257	3alpha-hydroxysteroid dehydrogenase/carbonyl reduc	99.97
2yut_A	207	Putative short-chain oxidoreductase; alpha and bet	99.97
3qp9_A	525	Type I polyketide synthase pikaii; rossmann fold,	99.97
3d7l_A	202	LIN1944 protein; APC89317, structural genomics, PS	99.96
2uv8_A	1887	Fatty acid synthase subunit alpha (FAS2); fatty ac	99.96
3mje_A	496	AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.	99.96
2uv9_A	1878	Fatty acid synthase alpha subunits; fungal, dehydr	99.96
2pff_A	1688	Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl	99.95
2dkn_A	255	3-alpha-hydroxysteroid dehydrogenase; oxidoreducta	99.95
3slk_A	795	Polyketide synthase extender module 2; rossmann fo	99.95
2fr1_A	486	Erythromycin synthase, eryai; short chain dehydrog	99.94
3zen_D	3089	Fatty acid synthase; transferase, mycolic acid bio	99.93
3rft_A	267	Uronate dehydrogenase; apoenzyme, rossmann fold, N	99.93
2z5l_A	511	Tylkr1, tylactone synthase starter module and modu	99.93
3enk_A	341	UDP-glucose 4-epimerase; seattle structural genomi	99.9
1orr_A	347	CDP-tyvelose-2-epimerase; rossmann fold, short-cha	99.9
3e8x_A	236	Putative NAD-dependent epimerase/dehydratase; stru	99.9
4ggo_A	401	Trans-2-enoyl-COA reductase; rossmann fold, oxidor	99.9
1y1p_A	342	ARII, aldehyde reductase II; rossmann fold, short	99.9
2gn4_A	344	FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann	99.9
1rkx_A	357	CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD;	99.9
2z1m_A	345	GDP-D-mannose dehydratase; short-chain dehydrogena	99.89
2pk3_A	321	GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, shor	99.89
1kew_A	361	RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fo	99.89
2bka_A	242	CC3, TAT-interacting protein TIP30; NADPH, PEG600,	99.89
1gy8_A	397	UDP-galactose 4-epimerase; oxidoreductase; HET: NA	99.88
1sb8_A	352	WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCN	99.88
2vz8_A	2512	Fatty acid synthase; transferase, phosphopantethei	99.88
1i24_A	404	Sulfolipid biosynthesis protein SQD1; SDR, short-c	99.88
2hun_A	336	336AA long hypothetical DTDP-glucose 4,6-dehydrat;	99.87
3ko8_A	312	NAD-dependent epimerase/dehydratase; isomerase, UD	99.87
3nzo_A	399	UDP-N-acetylglucosamine 4,6-dehydratase; structura	99.87
1ek6_A	348	UDP-galactose 4-epimerase; short-chain dehydrogena	99.87
2p5y_A	311	UDP-glucose 4-epimerase; TTHA0591, structural geno	99.87
3r6d_A	221	NAD-dependent epimerase/dehydratase; structural ge	99.86
3ruf_A	351	WBGU; rossmann fold, UDP-hexose 4-epimerase, isome	99.86
3ehe_A	313	UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC,	99.86
1xq6_A	253	Unknown protein; structural genomics, protein stru	99.86
1db3_A	372	GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lya	99.86
1oc2_A	348	DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnos	99.86
2c20_A	330	UDP-glucose 4-epimerase; carbohydrate metabolism,	99.86
2x4g_A	342	Nucleoside-diphosphate-sugar epimerase; isomerase;	99.86
1n7h_A	381	GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR,	99.86
2pzm_A	330	Putative nucleotide sugar epimerase/ dehydratase;	99.86
2c29_D	337	Dihydroflavonol 4-reductase; flavonoids, short deh	99.86
3ay3_A	267	NAD-dependent epimerase/dehydratase; glucuronic ac	99.86
1r6d_A	337	TDP-glucose-4,6-dehydratase; rossmann fold, short-	99.85
1udb_A	338	Epimerase, UDP-galactose-4-epimerase; isomerase; H	99.85
3dqp_A	219	Oxidoreductase YLBE; alpha-beta protein., structur	99.85
3dhn_A	227	NAD-dependent epimerase/dehydratase; reductase, PF	99.85
1t2a_A	375	GDP-mannose 4,6 dehydratase; structural genomics c	99.85
1rpn_A	335	GDP-mannose 4,6-dehydratase; short-chain dehydroge	99.85
2hrz_A	342	AGR_C_4963P, nucleoside-diphosphate-sugar epimeras	99.85
4egb_A	346	DTDP-glucose 4,6-dehydratase; rhamnose pathway, ce	99.85
4id9_A	347	Short-chain dehydrogenase/reductase; putative dehy	99.85
3sxp_A	362	ADP-L-glycero-D-mannoheptose-6-epimerase; rossman	99.84
4f6c_A	427	AUSA reductase domain protein; thioester reductase	99.84
2c5a_A	379	GDP-mannose-3', 5'-epimerase; short chain dehydrat	99.84
2rh8_A	338	Anthocyanidin reductase; flavonoids, rossmann fold	99.83
2p4h_X	322	Vestitone reductase; NADPH-dependent reductase, is	99.83
2yy7_A	312	L-threonine dehydrogenase; thermolabIle, flavobact	99.83
3slg_A	372	PBGP3 protein; structural genomics, seattle struct	99.82
2bll_A	345	Protein YFBG; decarboxylase, short chain dehydroge	99.82
1z45_A	699	GAL10 bifunctional protein; epimerase, mutarotase,	99.82
3h2s_A	224	Putative NADH-flavin reductase; Q03B84, NESG, LCR1	99.82
2q1w_A	333	Putative nucleotide sugar epimerase/ dehydratase;	99.81
1hdo_A	206	Biliverdin IX beta reductase; foetal metabolism, H	99.81
3m2p_A	311	UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J	99.81
3ajr_A	317	NDP-sugar epimerase; L-threonine dehydrogenase, L-	99.81
2ydy_A	315	Methionine adenosyltransferase 2 subunit beta; oxi	99.81
2q1s_A	377	Putative nucleotide sugar epimerase/ dehydratase;	99.8
2x6t_A	357	ADP-L-glycero-D-manno-heptose-6-epimerase; isomera	99.8
4dqv_A	478	Probable peptide synthetase NRP (peptide synthase;	99.8
2a35_A	215	Hypothetical protein PA4017; alpha-beta-alpha sand	99.79
3qvo_A	236	NMRA family protein; structural genomics, PSI-biol	99.79
3ew7_A	221	LMO0794 protein; Q8Y8U8_lismo, putative NAD-depend	99.79
1vl0_A	292	DTDP-4-dehydrorhamnose reductase, RFBD ortholog; s	99.78
2ggs_A	273	273AA long hypothetical DTDP-4-dehydrorhamnose red	99.78
1e6u_A	321	GDP-fucose synthetase; epimerase/reductase, SDR, R	99.78
1eq2_A	310	ADP-L-glycero-D-mannoheptose 6-epimerase; N-termin	99.77
2b69_A	343	UDP-glucuronate decarboxylase 1; UDP-glucoronic ac	99.77
3sc6_A	287	DTDP-4-dehydrorhamnose reductase; RFBD, structural	99.77
1z7e_A	660	Protein aRNA; rossmann fold, OB-like fold, hydrola	99.76
1n2s_A	299	DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold	99.75
4b8w_A	319	GDP-L-fucose synthase; oxidoreductase; HET: NAP GD	99.75
4f6l_B	508	AUSA reductase domain protein; thioester reductase	99.73
3vps_A	321	TUNA, NAD-dependent epimerase/dehydratase; tunicam	99.73
2jl1_A	287	Triphenylmethane reductase; oxidoreductase, biorem	99.71
3gpi_A	286	NAD-dependent epimerase/dehydratase; structural ge	99.67
2wm3_A	299	NMRA-like family domain containing protein 1; unkn	99.67
1xgk_A	352	Nitrogen metabolite repression regulator NMRA; ros	99.66
2zcu_A	286	Uncharacterized oxidoreductase YTFG; alpha-beta sa	99.66
3ius_A	286	Uncharacterized conserved protein; APC63810, silic	99.64
3i6i_A	346	Putative leucoanthocyanidin reductase 1; rossmann	99.63
3e48_A	289	Putative nucleoside-diphosphate-sugar epimerase; a	99.63
2gas_A	307	Isoflavone reductase; NADPH-dependent reductase, o	99.61
2v6g_A	364	Progesterone 5-beta-reductase; tyrosine-dependent	99.59
3oh8_A	516	Nucleoside-diphosphate sugar epimerase (SULA FAMI;	99.58
3st7_A	369	Capsular polysaccharide synthesis enzyme CAP5F; ro	99.58
1qyd_A	313	Pinoresinol-lariciresinol reductase; NADPH-depende	99.53
3c1o_A	321	Eugenol synthase; phenylpropene, PIP reductase, sh	99.52
1qyc_A	308	Phenylcoumaran benzylic ether reductase PT1; NADPH	99.51
2r6j_A	318	Eugenol synthase 1; phenylpropene, PIP reductase,	99.5
4b4o_A	298	Epimerase family protein SDR39U1; isomerase; HET:	99.41
1y7t_A	327	Malate dehydrogenase; NAD-dependent-MDH-NADPH comp	99.32
1lu9_A	287	Methylene tetrahydromethanopterin dehydrogenase; a	99.3
1u7z_A	226	Coenzyme A biosynthesis bifunctional protein coabc	99.08
3ic5_A	118	Putative saccharopine dehydrogenase; structural ge	98.92
2gk4_A	232	Conserved hypothetical protein; alpha-beta-alpha s	98.88
4ina_A	405	Saccharopine dehydrogenase; structural genomics, P	98.87
3gxh_A	157	Putative phosphatase (DUF442); YP_001181608.1, str	98.8
1v3u_A	333	Leukotriene B4 12- hydroxydehydrogenase/prostaglan	98.66
1pqw_A	198	Polyketide synthase; rossmann fold, dimer, structu	98.61
1ff9_A	450	Saccharopine reductase; lysine biosynthesis, alpha	98.56
2eez_A	369	Alanine dehydrogenase; TTHA0216, structural genomi	98.49
1nvt_A	287	Shikimate 5'-dehydrogenase; structural genomics, P	98.47
2hcy_A	347	Alcohol dehydrogenase 1; tetramer of asymmetric di	98.47
2o7s_A	523	DHQ-SDH PR, bifunctional 3-dehydroquinate dehydrat	98.46
1b8p_A	329	Protein (malate dehydrogenase); oxidoreductase; 1.	98.44
2j3h_A	345	NADP-dependent oxidoreductase P1; double bond redu	98.43
3llv_A	141	Exopolyphosphatase-related protein; NAD(P)-binding	98.41
1qor_A	327	Quinone oxidoreductase; HET: NAP; 2.20A {Escherich	98.4
2axq_A	467	Saccharopine dehydrogenase; rossmann fold variant,	98.4
3tnl_A	315	Shikimate dehydrogenase; structural genomics, cent	98.38
1wly_A	333	CAAR, 2-haloacrylate reductase; NADPH-dependent ox	98.38
2zb4_A	357	Prostaglandin reductase 2; rossmann fold, alternat	98.38
2j8z_A	354	Quinone oxidoreductase; medium-chain dehydrogenase	98.33
4b7c_A	336	Probable oxidoreductase; NADP cofactor, rossmann f	98.33
1yb5_A	351	Quinone oxidoreductase; medium-chain dehydrogenase	98.29
2hmt_A	144	YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane	98.28
1smk_A	326	Malate dehydrogenase, glyoxysomal; tricarboxylic c	98.27
1nyt_A	271	Shikimate 5-dehydrogenase; alpha/beta domains, WID	98.22
1jvb_A	347	NAD(H)-dependent alcohol dehydrogenase; archaeon,	98.21
1hye_A	313	L-lactate/malate dehydrogenase; nucleotide binding	98.18
4dup_A	353	Quinone oxidoreductase; PSI-biology, structural ge	98.12
1lss_A	140	TRK system potassium uptake protein TRKA homolog;	98.12
1id1_A	153	Putative potassium channel protein; RCK domain, E.	98.11
3jyo_A	283	Quinate/shikimate dehydrogenase; enzyme-cofactor c	98.11
1o6z_A	303	MDH, malate dehydrogenase; halophilic, ION-binding	98.11
3abi_A	365	Putative uncharacterized protein PH1688; L-lysine	98.08
2eih_A	343	Alcohol dehydrogenase; zinc ION binding protein, s	98.06
3t4e_A	312	Quinate/shikimate dehydrogenase; structural genomi	98.04
1jw9_B	249	Molybdopterin biosynthesis MOEB protein; MOEB: mod	98.02
3gms_A	340	Putative NADPH:quinone reductase; structural genom	98.0
3qwb_A	334	Probable quinone oxidoreductase; rossmann fold, qu	97.99
3jyn_A	325	Quinone oxidoreductase; rossmann fold, protein-NAD	97.99
4a0s_A	447	Octenoyl-COA reductase/carboxylase; oxidoreductase	97.94
4eye_A	342	Probable oxidoreductase; structural genomics, niai	97.93
3h8v_A	292	Ubiquitin-like modifier-activating enzyme 5; rossm	97.88
1p77_A	272	Shikimate 5-dehydrogenase; NADPH, oxidoreductase;	97.86
3pi7_A	349	NADH oxidoreductase; groes-like fold, NAD(P)-bindi	97.85
1mld_A	314	Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D	97.84
3krt_A	456	Crotonyl COA reductase; structural genomics, prote	97.83
2c0c_A	362	Zinc binding alcohol dehydrogenase, domain contain	97.82
3fwz_A	140	Inner membrane protein YBAL; TRKA-N domain, E.coli	97.8
3fbg_A	346	Putative arginate lyase; structural genomics, unkn	97.78
3l4b_C	218	TRKA K+ channel protien TM1088B; potassium channel	97.78
2g1u_A	155	Hypothetical protein TM1088A; structural genomics,	97.77
1rjw_A	339	ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD	97.74
1pjc_A	361	Protein (L-alanine dehydrogenase); oxidoreductase,	97.74
2egg_A	297	AROE, shikimate 5-dehydrogenase; dimer, X-RAY diff	97.73
2z2v_A	365	Hypothetical protein PH1688; L-lysine dehydrogenas	97.71
2cdc_A	366	Glucose dehydrogenase glucose 1-dehydrogenase, DHG	97.7
5mdh_A	333	Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH	97.68
2vhw_A	377	Alanine dehydrogenase; NAD, secreted, oxidoreducta	97.66
3gaz_A	343	Alcohol dehydrogenase superfamily protein; oxidore	97.66
1iz0_A	302	Quinone oxidoreductase; APO-enzyme, riken structur	97.63
1p9o_A	313	Phosphopantothenoylcysteine synthetase; ligase; 2.	97.63
1yqd_A	366	Sinapyl alcohol dehydrogenase; lignin, monolignol,	97.63
1zud_1	251	Adenylyltransferase THIF; thiamin, thiazole, prote	97.62
3c85_A	183	Putative glutathione-regulated potassium-efflux S	97.61
3oj0_A	144	Glutr, glutamyl-tRNA reductase; structural genomic	97.59
3pqe_A	326	L-LDH, L-lactate dehydrogenase; FBP, oxidoreductas	97.58
3pwz_A	272	Shikimate dehydrogenase 3; alpha-beta, oxidoreduct	97.56
3o8q_A	281	Shikimate 5-dehydrogenase I alpha; structural geno	97.56
3fi9_A	343	Malate dehydrogenase; structural genomics, oxidore	97.53
1xa0_A	328	Putative NADPH dependent oxidoreductases; structur	97.48
2vn8_A	375	Reticulon-4-interacting protein 1; mitochondrion,	97.45
3gvi_A	324	Malate dehydrogenase; NAD, oxidoreductase, tricarb	97.41
1oju_A	294	MDH, malate dehydrogenase; hyperthermophilic, oxid	97.4
4aj2_A	331	L-lactate dehydrogenase A chain; oxidoreductase-in	97.39
3m6i_A	363	L-arabinitol 4-dehydrogenase; medium chain dehydro	97.38
3uog_A	363	Alcohol dehydrogenase; structural genomics, protei	97.37
3rui_A	340	Ubiquitin-like modifier-activating enzyme ATG7; au	97.35
3hhp_A	312	Malate dehydrogenase; MDH, citric acid cycle, TCA	97.32
2d8a_A	348	PH0655, probable L-threonine 3-dehydrogenase; pyro	97.31
1vj0_A	380	Alcohol dehydrogenase, zinc-containing; TM0436, st	97.29
2x0j_A	294	Malate dehydrogenase; oxidoreductase, hyperthermop	97.29
1gu7_A	364	Enoyl-[acyl-carrier-protein] reductase [NADPH, B-s	97.28
3vku_A	326	L-LDH, L-lactate dehydrogenase; rossmann fold, NAD	97.27
3h5n_A	353	MCCB protein; ubiquitin-activating enzyme, microci	97.26
3phh_A	269	Shikimate dehydrogenase; shikimate pathway, helico	97.26
3ldh_A	330	Lactate dehydrogenase; oxidoreductase, CHOH donor,	97.25
1jay_A	212	Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossma	97.19
1h2b_A	359	Alcohol dehydrogenase; oxidoreductase, archaea, hy	97.19
1e3j_A	352	NADP(H)-dependent ketose reductase; oxidoreductase	97.19
2dq4_A	343	L-threonine 3-dehydrogenase; NAD-dependent, oxidor	97.19
4dvj_A	363	Putative zinc-dependent alcohol dehydrogenase Pro;	97.18
3p7m_A	321	Malate dehydrogenase; putative dehydrogenase, enzy	97.17
3tl2_A	315	Malate dehydrogenase; center for structural genomi	97.15
2xxj_A	310	L-LDH, L-lactate dehydrogenase; oxidoreductase, hy	97.15
1uuf_A	369	YAHK, zinc-type alcohol dehydrogenase-like protein	97.15
4h7p_A	345	Malate dehydrogenase; ssgcid, structural G seattle	97.13
3ond_A	488	Adenosylhomocysteinase; plant protein, enzyme-subs	97.13
1gpj_A	404	Glutamyl-tRNA reductase; tRNA-dependent tetrapyrro	97.13
4gsl_A	615	Ubiquitin-like modifier-activating enzyme ATG7; ub	97.12
3nep_X	314	Malate dehydrogenase; halophIle, molecular adpatat	97.11
1pl8_A	356	Human sorbitol dehydrogenase; NAD, oxidoreductase;	97.1
2aef_A	234	Calcium-gated potassium channel MTHK; rossmann fol	97.1
4ej6_A	370	Putative zinc-binding dehydrogenase; structural ge	97.08
2cf5_A	357	Atccad5, CAD, cinnamyl alcohol dehydrogenase; lign	97.08
3s2e_A	340	Zinc-containing alcohol dehydrogenase superfamily;	97.06
1cdo_A	374	Alcohol dehydrogenase; oxidoreductase, oxidoreduct	97.03
3gqv_A	371	Enoyl reductase; medium-chain reductase (MDR super	97.03
4e12_A	283	Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1	97.01
3fbt_A	282	Chorismate mutase and shikimate 5-dehydrogenase fu	97.01
1piw_A	360	Hypothetical zinc-type alcohol dehydrogenase- like	97.01
2v6b_A	304	L-LDH, L-lactate dehydrogenase; oxidoreductase, ra	96.98
2h6e_A	344	ADH-4, D-arabinose 1-dehydrogenase; rossman fold,	96.96
3don_A	277	Shikimate dehydrogenase; alpha-beta structure, ros	96.94
1ldn_A	316	L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NA	96.93
3tqh_A	321	Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella	96.92
2fzw_A	373	Alcohol dehydrogenase class III CHI chain; S-nitro	96.92
3two_A	348	Mannitol dehydrogenase; cinnamyl-alcohol dehydroge	96.91
1t2d_A	322	LDH-P, L-lactate dehydrogenase; ternary complex, o	96.91
2b5w_A	357	Glucose dehydrogenase; nucleotide binding motif, o	96.9
3iup_A	379	Putative NADPH:quinone oxidoreductase; YP_296108.1	96.89
3uko_A	378	Alcohol dehydrogenase class-3; alcohol dehydrogena	96.89
1ez4_A	318	Lactate dehydrogenase; rossmann fold, oxidoreducta	96.89
1pzg_A	331	LDH, lactate dehydrogenase; apicomplexa, APAD, tet	96.88
1ur5_A	309	Malate dehydrogenase; oxidoreductase, tricarboxyli	96.87
2jhf_A	374	Alcohol dehydrogenase E chain; oxidoreductase, met	96.86
3vh1_A	598	Ubiquitin-like modifier-activating enzyme ATG7; au	96.86
1e3i_A	376	Alcohol dehydrogenase, class II; HET: NAD; 2.08A {	96.85
3ip1_A	404	Alcohol dehydrogenase, zinc-containing; structural	96.83
2hjr_A	328	Malate dehydrogenase; malaria, structural genomics	96.82
2zqz_A	326	L-LDH, L-lactate dehydrogenase; oxidoreductase, ro	96.82
1guz_A	310	Malate dehydrogenase; oxidoreductase, tricarboxyli	96.81
3d0o_A	317	L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, gly	96.81
1a5z_A	319	L-lactate dehydrogenase; oxidoreductase, glycolysi	96.75
3nx4_A	324	Putative oxidoreductase; csgid, structural genomic	96.75
1y6j_A	318	L-lactate dehydrogenase; southeast collaboratory f	96.74
3c24_A	286	Putative oxidoreductase; YP_511008.1, structural g	96.74
4g65_A	461	TRK system potassium uptake protein TRKA; structur	96.73
3l9w_A	413	Glutathione-regulated potassium-efflux system Pro	96.71
1kol_A	398	Formaldehyde dehydrogenase; oxidoreductase; HET: N	96.71
1p0f_A	373	NADP-dependent alcohol dehydrogenase; ADH topology	96.7
3tum_A	269	Shikimate dehydrogenase family protein; rossmann-f	96.69
2ewd_A	317	Lactate dehydrogenase,; protein-substrate_cofactor	96.65
1tt5_B	434	Ubiquitin-activating enzyme E1C isoform 1; cell cy	96.64
2d4a_B	308	Malate dehydrogenase; archaea, hyperthermophIle, o	96.6
1zsy_A	357	Mitochondrial 2-enoyl thioester reductase; medium-	96.6
2dph_A	398	Formaldehyde dismutase; dismutation of aldehydes,	96.6
1y8q_B	640	Anthracycline-, ubiquitin-like 2 activating enzyme	96.58
1f8f_A	371	Benzyl alcohol dehydrogenase; rossmann fold, oxido	96.57
1f0y_A	302	HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive	96.5
1x13_A	401	NAD(P) transhydrogenase subunit alpha; NAD(H)-bind	96.5
2pv7_A	298	T-protein [includes: chorismate mutase (EC 5.4.99	96.5
1p9l_A	245	Dihydrodipicolinate reductase; oxidoreductase, lys	96.46
3p2y_A	381	Alanine dehydrogenase/pyridine nucleotide transhy;	96.46
3fpc_A	352	NADP-dependent alcohol dehydrogenase; oxydoreducta	96.4
1lnq_A	336	MTHK channels, potassium channel related protein;	96.38
1tt7_A	330	YHFP; alcohol dehydrogenase, Zn-dependent, NAD, st	96.36
3jv7_A	345	ADH-A; dehydrogenase, nucleotide binding, rossmann	96.35
1y8q_A	346	Ubiquitin-like 1 activating enzyme E1A; SUMO, hete	96.34
3goh_A	315	Alcohol dehydrogenase, zinc-containing; NP_718042.	96.32
3u62_A	253	Shikimate dehydrogenase; shikimate pathway, oxidor	96.25
3d1l_A	266	Putative NADP oxidoreductase BF3122; structural ge	96.24
7mdh_A	375	Protein (malate dehydrogenase); chloroplastic mala	96.19
2f1k_A	279	Prephenate dehydrogenase; tyrosine synthesis, X-RA	96.18
3tri_A	280	Pyrroline-5-carboxylate reductase; amino acid bios	96.15
2d5c_A	263	AROE, shikimate 5-dehydrogenase; substrate, dimer,	96.11
1lld_A	319	L-lactate dehydrogenase; oxidoreductase(CHOH (D)-N	96.09
3qha_A	296	Putative oxidoreductase; seattle structural genomi	96.09
4dio_A	405	NAD(P) transhydrogenase subunit alpha PART 1; stru	96.08
2h78_A	302	Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC601	96.07
3pef_A	287	6-phosphogluconate dehydrogenase, NAD-binding; gam	96.0
1l7d_A	384	Nicotinamide nucleotide transhydrogenase, subunit	95.98
1obb_A	480	Maltase, alpha-glucosidase; glycosidase, sulfinic	95.86
4dll_A	320	2-hydroxy-3-oxopropionate reductase; structural ge	95.85
4a2c_A	346	Galactitol-1-phosphate 5-dehydrogenase; oxidoreduc	95.82
2i6t_A	303	Ubiquitin-conjugating enzyme E2-like isoform A; L-	95.74
2dpo_A	319	L-gulonate 3-dehydrogenase; structural genomics, N	95.73
3gg2_A	450	Sugar dehydrogenase, UDP-glucose/GDP-mannose dehyd	95.71
2raf_A	209	Putative dinucleotide-binding oxidoreductase; NP_7	95.71
3k96_A	356	Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA	95.61
3doj_A	310	AT3G25530, dehydrogenase-like protein; gamma-hydro	95.59
2vns_A	215	Metalloreductase steap3; metal-binding, transmembr	95.57
4e21_A	358	6-phosphogluconate dehydrogenase (decarboxylating;	95.54

>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}

Probab=100.00  E-value=6.3e-46  Score=308.02  Aligned_cols=189  Identities=27%  Similarity=0.285  Sum_probs=176.5

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      |++|||||++|||+++|+.|+++|++|++++|++++++++.+++.+.  +.++.++++|++++++++++++++.+++|++
T Consensus         8 KvalVTGas~GIG~aiA~~la~~Ga~Vv~~~~~~~~~~~~~~~i~~~--g~~~~~~~~Dvt~~~~v~~~~~~~~~~~G~i   85 (254)
T 4fn4_A            8 KVVIVTGAGSGIGRAIAKKFALNDSIVVAVELLEDRLNQIVQELRGM--GKEVLGVKADVSKKKDVEEFVRRTFETYSRI   85 (254)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT--TCCEEEEECCTTSHHHHHHHHHHHHHHHSCC
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhc--CCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            78999999999999999999999999999999999999999998765  5689999999999999999999999999999


Q ss_pred             eEEEEcCCCCC---CCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccccC
Q 025509           81 NILINNAGIMG---TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKI  157 (251)
Q Consensus        81 d~lv~~ag~~~---~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~  157 (251)
                      |+||||||+..   ++.++++|+|++++++|+.|+++++|+++|+|+++     +.|+||++||.++..           
T Consensus        86 DiLVNNAGi~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~-----~~G~IVnisS~~g~~-----------  149 (254)
T 4fn4_A           86 DVLCNNAGIMDGVTPVAEVSDELWERVLAVNLYSAFYSSRAVIPIMLKQ-----GKGVIVNTASIAGIR-----------  149 (254)
T ss_dssp             CEEEECCCCCCTTCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----TCEEEEEECCGGGTC-----------
T ss_pred             CEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-----CCcEEEEEechhhcC-----------
Confidence            99999999753   46788999999999999999999999999999987     579999999998877           


Q ss_pred             CCCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCCc
Q 025509          158 NDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRHNS  213 (251)
Q Consensus       158 ~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~~~  213 (251)
                          +.++..+|++||+|+.+|+++||.|++++|  ||||+|+||+|+|||.....
T Consensus       150 ----~~~~~~~Y~asKaal~~ltr~lA~ela~~g--IrVN~V~PG~i~T~~~~~~~  199 (254)
T 4fn4_A          150 ----GGFAGAPYTVAKHGLIGLTRSIAAHYGDQG--IRAVAVLPGTVKTNIGLGSS  199 (254)
T ss_dssp             ----SSSSCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECSBCSSCTTSCS
T ss_pred             ----CCCCChHHHHHHHHHHHHHHHHHHHhhhhC--eEEEEEEeCCCCCccccccc
Confidence                778889999999999999999999999999  99999999999999976543

>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}

Probab=100.00  E-value=2e-45  Score=305.21  Aligned_cols=189  Identities=22%  Similarity=0.280  Sum_probs=176.1

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      |++|||||++|||+++|+.|+++|++|++++|+++.+++..+++.+.  +.++.++++|++++++++++++++.+++|++
T Consensus        10 KvalVTGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~l~~~--g~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~i   87 (255)
T 4g81_D           10 KTALVTGSARGLGFAYAEGLAAAGARVILNDIRATLLAESVDTLTRK--GYDAHGVAFDVTDELAIEAAFSKLDAEGIHV   87 (255)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHT--TCCEEECCCCTTCHHHHHHHHHHHHHTTCCC
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc--CCcEEEEEeeCCCHHHHHHHHHHHHHHCCCC
Confidence            78999999999999999999999999999999999999999988776  5679999999999999999999999999999


Q ss_pred             eEEEEcCCCCC--CCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccccCC
Q 025509           81 NILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKIN  158 (251)
Q Consensus        81 d~lv~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~  158 (251)
                      |+||||||+..  ++.++++++|++++++|+.|++.++|+++|+|.++    +++|+||++||.++..            
T Consensus        88 DiLVNNAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~----~~~G~IVnisS~~~~~------------  151 (255)
T 4g81_D           88 DILINNAGIQYRKPMVELELENWQKVIDTNLTSAFLVSRSAAKRMIAR----NSGGKIINIGSLTSQA------------  151 (255)
T ss_dssp             CEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH----TCCEEEEEECCGGGTS------------
T ss_pred             cEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc----cCCCEEEEEeehhhcC------------
Confidence            99999999753  47789999999999999999999999999999875    2479999999998876            


Q ss_pred             CCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCC
Q 025509          159 DPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRHN  212 (251)
Q Consensus       159 ~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~~  212 (251)
                         +.++..+|++||+|+.+|+++||.|++++|  ||||+|+||+|+|||....
T Consensus       152 ---~~~~~~~Y~asKaal~~ltr~lA~ela~~g--IrVN~V~PG~i~T~~~~~~  200 (255)
T 4g81_D          152 ---ARPTVAPYTAAKGGIKMLTCSMAAEWAQFN--IQTNAIGPGYILTDMNTAL  200 (255)
T ss_dssp             ---BCTTCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECSBCCGGGHHH
T ss_pred             ---CCCCchhHHHHHHHHHHHHHHHHHHhcccC--eEEEEEeeCCCCCchhhcc
Confidence               778889999999999999999999999999  9999999999999997753

>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}

Probab=100.00  E-value=4.3e-44  Score=299.79  Aligned_cols=214  Identities=21%  Similarity=0.246  Sum_probs=176.6

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      |++|||||++|||+++|+.|+++|++|++++|+++.+++..+++     +.++.++++|++|+++++++++++.+++|++
T Consensus        30 KvalVTGas~GIG~aiA~~la~~Ga~V~i~~r~~~~l~~~~~~~-----g~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~i  104 (273)
T 4fgs_A           30 KIAVITGATSGIGLAAAKRFVAEGARVFITGRRKDVLDAAIAEI-----GGGAVGIQADSANLAELDRLYEKVKAEAGRI  104 (273)
T ss_dssp             CEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH-----CTTCEEEECCTTCHHHHHHHHHHHHHHHSCE
T ss_pred             CEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHc-----CCCeEEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence            68999999999999999999999999999999999888887766     6678999999999999999999999999999


Q ss_pred             eEEEEcCCCCC--CCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccccCC
Q 025509           81 NILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKIN  158 (251)
Q Consensus        81 d~lv~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~  158 (251)
                      |+||||||+..  ++.++++|+|++++++|+.|+++++|+++|+|++       .|+||++||.++..            
T Consensus       105 DiLVNNAG~~~~~~~~~~~~e~w~~~~~vNl~g~~~~~~~~~p~m~~-------~G~IInisS~~~~~------------  165 (273)
T 4fgs_A          105 DVLFVNAGGGSMLPLGEVTEEQYDDTFDRNVKGVLFTVQKALPLLAR-------GSSVVLTGSTAGST------------  165 (273)
T ss_dssp             EEEEECCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHTTTEEE-------EEEEEEECCGGGGS------------
T ss_pred             CEEEECCCCCCCCChhhccHHHHHHHHHHHhHHHHHHHHHHHHHHhh-------CCeEEEEeehhhcc------------
Confidence            99999999753  5778999999999999999999999999999954       48999999998876            


Q ss_pred             CCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCCcchhhh--hhhhhhhhhHhhhccccC
Q 025509          159 DPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRHNSLFRSM--NTILHALPGIAGKCLLKN  236 (251)
Q Consensus       159 ~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~  236 (251)
                         +.+...+|++||+|+.+|+++||.|++++|  ||||+|+||+++||++.........  ............-..+-.
T Consensus       166 ---~~~~~~~Y~asKaav~~ltr~lA~Ela~~g--IrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~PlgR~g~  240 (273)
T 4fgs_A          166 ---GTPAFSVYAASKAALRSFARNWILDLKDRG--IRINTLSPGPTETTGLVELAGKDPVQQQGLLNALAAQVPMGRVGR  240 (273)
T ss_dssp             ---CCTTCHHHHHHHHHHHHHHHHHHHHTTTSC--EEEEEEEECSBCC---------CHHHHHHHHHHHHHHSTTSSCBC
T ss_pred             ---CCCCchHHHHHHHHHHHHHHHHHHHhcccC--eEEEEEeeCCCCChhHHHhhccCchhhHHHHHHHHhcCCCCCCcC
Confidence               788889999999999999999999999999  9999999999999997754322111  111111222222244556


Q ss_pred             hHHHHHH
Q 025509          237 VQQVILN  243 (251)
Q Consensus       237 ~~~~~~~  243 (251)
                      |++.+..
T Consensus       241 peeiA~~  247 (273)
T 4fgs_A          241 AEEVAAA  247 (273)
T ss_dssp             HHHHHHH
T ss_pred             HHHHHHH
Confidence            7777764

>4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A*

Probab=100.00  E-value=5.2e-43  Score=291.61  Aligned_cols=186  Identities=24%  Similarity=0.329  Sum_probs=167.5

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      |++|||||++|||+++|++|+++|++|++++|+.+..+. .+++.+.  +.++.++++|++++++++++++++.+++|++
T Consensus         8 KvalVTGas~GIG~aia~~la~~Ga~Vv~~~r~~~~~~~-~~~~~~~--~~~~~~~~~Dv~~~~~v~~~v~~~~~~~G~i   84 (258)
T 4gkb_A            8 KVVIVTGGASGIGGAISMRLAEERAIPVVFARHAPDGAF-LDALAQR--QPRATYLPVELQDDAQCRDAVAQTIATFGRL   84 (258)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCCHHH-HHHHHHH--CTTCEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCcccHHH-HHHHHhc--CCCEEEEEeecCCHHHHHHHHHHHHHHhCCC
Confidence            789999999999999999999999999999999876543 3445554  5678999999999999999999999999999


Q ss_pred             eEEEEcCCCCCC-CCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccccCCC
Q 025509           81 NILINNAGIMGT-PFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKIND  159 (251)
Q Consensus        81 d~lv~~ag~~~~-~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~  159 (251)
                      |+||||||+... +.+.+.++|++.+++|+.+++.++|+++|+|+++      +|+||++||.++..             
T Consensus        85 DiLVNnAGi~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~------~G~IVnisS~~~~~-------------  145 (258)
T 4gkb_A           85 DGLVNNAGVNDGIGLDAGRDAFVASLERNLIHYYAMAHYCVPHLKAT------RGAIVNISSKTAVT-------------  145 (258)
T ss_dssp             CEEEECCCCCCCCCTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH------TCEEEEECCTHHHH-------------
T ss_pred             CEEEECCCCCCCCCccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc------CCeEEEEeehhhcc-------------
Confidence            999999998643 5678899999999999999999999999999764      59999999999887             


Q ss_pred             CCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCC
Q 025509          160 PSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRHN  212 (251)
Q Consensus       160 ~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~~  212 (251)
                        +.++..+|++||+|+.+|+++||.|++++|  ||||+|+||+|+|||.+..
T Consensus       146 --~~~~~~~Y~asKaav~~ltr~lA~ela~~g--IrVN~V~PG~i~T~~~~~~  194 (258)
T 4gkb_A          146 --GQGNTSGYCASKGAQLALTREWAVALREHG--VRVNAVIPAEVMTPLYRNW  194 (258)
T ss_dssp             --CCSSCHHHHHHHHHHHHHHHHHHHHHGGGT--CEEEEEEECSBCCSCC---
T ss_pred             --CCCCchHHHHHHHHHHHHHHHHHHHhcccC--eEEEEEecCCCCChhHhhh
Confidence              778889999999999999999999999999  9999999999999998753

>4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1}

Probab=100.00  E-value=2.5e-43  Score=289.65  Aligned_cols=204  Identities=24%  Similarity=0.252  Sum_probs=169.7

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      |++|||||++|||+++|++|+++|++|++++|+.+.++.        ..+..+..+++|++|+++++++++    ++|++
T Consensus        12 K~alVTGas~GIG~aia~~la~~Ga~Vv~~~~~~~~~~~--------~~~~~~~~~~~Dv~~~~~v~~~~~----~~g~i   79 (242)
T 4b79_A           12 QQVLVTGGSSGIGAAIAMQFAELGAEVVALGLDADGVHA--------PRHPRIRREELDITDSQRLQRLFE----ALPRL   79 (242)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTSTTS--------CCCTTEEEEECCTTCHHHHHHHHH----HCSCC
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHhh--------hhcCCeEEEEecCCCHHHHHHHHH----hcCCC
Confidence            789999999999999999999999999999999766432        114679999999999999988775    47899


Q ss_pred             eEEEEcCCCCCCCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccccCCCC
Q 025509           81 NILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDP  160 (251)
Q Consensus        81 d~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~  160 (251)
                      |+||||||+..+..+++.++|++++++|+.|+++++|+++|+|+++      +|+||++||.++..              
T Consensus        80 DiLVNNAGi~~~~~~~~~~~w~~~~~vNl~g~~~~~~~~~p~m~~~------~G~IVnisS~~~~~--------------  139 (242)
T 4b79_A           80 DVLVNNAGISRDREEYDLATFERVLRLNLSAAMLASQLARPLLAQR------GGSILNIASMYSTF--------------  139 (242)
T ss_dssp             SEEEECCCCCCGGGGGSHHHHHHHHHHHTHHHHHHHHHHHHHHHHH------CEEEEEECCGGGTS--------------
T ss_pred             CEEEECCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc------CCeEEEEeeccccC--------------
Confidence            9999999998877888999999999999999999999999999874      69999999998877              


Q ss_pred             CCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCCcchh-hhhhhhhhhhhHhhhccccChHH
Q 025509          161 SGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRHNSLFR-SMNTILHALPGIAGKCLLKNVQQ  239 (251)
Q Consensus       161 ~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~  239 (251)
                       +.++.++|++||+|+.+|+|+||.|++++|  ||||+|+||+|+|||........ ....+....|.    ..+-.|++
T Consensus       140 -~~~~~~~Y~asKaav~~ltr~lA~Ela~~g--IrVNaV~PG~i~T~m~~~~~~~~~~~~~~~~~~Pl----gR~g~pee  212 (242)
T 4b79_A          140 -GSADRPAYSASKGAIVQLTRSLACEYAAER--IRVNAIAPGWIDTPLGAGLKADVEATRRIMQRTPL----ARWGEAPE  212 (242)
T ss_dssp             -CCSSCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECSBCCC-----CCCHHHHHHHHHTCTT----CSCBCHHH
T ss_pred             -CCCCCHHHHHHHHHHHHHHHHHHHHhhhcC--eEEEEEEeCCCCChhhhcccCCHHHHHHHHhcCCC----CCCcCHHH
Confidence             778889999999999999999999999999  99999999999999987644322 22233333332    44556777


Q ss_pred             HHHH
Q 025509          240 VILN  243 (251)
Q Consensus       240 ~~~~  243 (251)
                      .+..
T Consensus       213 iA~~  216 (242)
T 4b79_A          213 VASA  216 (242)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            6654

>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*

Probab=100.00  E-value=4.2e-43  Score=289.93  Aligned_cols=182  Identities=20%  Similarity=0.235  Sum_probs=163.9

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      |+||||||++|||+++|++|+++|++|++++|+++.+++..+    +  ..++.++++|++|+++++++++++.+++|++
T Consensus         3 K~vlVTGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~~----~--~~~~~~~~~Dv~~~~~v~~~v~~~~~~~g~i   76 (247)
T 3ged_A            3 RGVIVTGGGHGIGKQICLDFLEAGDKVCFIDIDEKRSADFAK----E--RPNLFYFHGDVADPLTLKKFVEYAMEKLQRI   76 (247)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHT----T--CTTEEEEECCTTSHHHHHHHHHHHHHHHSCC
T ss_pred             CEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH----h--cCCEEEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence            789999999999999999999999999999999876655433    2  4578899999999999999999999999999


Q ss_pred             eEEEEcCCCCC--CCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccccCC
Q 025509           81 NILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKIN  158 (251)
Q Consensus        81 d~lv~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~  158 (251)
                      |+||||||+..  ++.+++.|+|++++++|+.+++.++|+++|+|.++      +|+||++||..+..            
T Consensus        77 DiLVNNAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~~m~~~------~G~IInisS~~~~~------------  138 (247)
T 3ged_A           77 DVLVNNACRGSKGILSSLLYEEFDYILSVGLKAPYELSRLCRDELIKN------KGRIINIASTRAFQ------------  138 (247)
T ss_dssp             CEEEECCCCCCCCGGGTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT------TCEEEEECCGGGTS------------
T ss_pred             CEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhc------CCcEEEEeeccccc------------
Confidence            99999999764  46788999999999999999999999999999874      69999999998876            


Q ss_pred             CCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCC
Q 025509          159 DPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRHN  212 (251)
Q Consensus       159 ~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~~  212 (251)
                         +.+...+|++||+|+.+|+++||.|+++ |  |+||+|+||+++|++.+..
T Consensus       139 ---~~~~~~~Y~asKaal~~ltk~lA~ela~-~--IrVN~I~PG~i~t~~~~~~  186 (247)
T 3ged_A          139 ---SEPDSEAYASAKGGIVALTHALAMSLGP-D--VLVNCIAPGWINVTEQQEF  186 (247)
T ss_dssp             ---CCTTCHHHHHHHHHHHHHHHHHHHHHTT-T--SEEEEEEECSBCCCC---C
T ss_pred             ---CCCCCHHHHHHHHHHHHHHHHHHHHHCC-C--CEEEEEecCcCCCCCcHHH
Confidence               7788899999999999999999999997 7  9999999999999987653

>4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens}

Probab=100.00  E-value=9.6e-43  Score=286.81  Aligned_cols=209  Identities=22%  Similarity=0.296  Sum_probs=172.9

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      |++|||||++|||+++|+.|+++|++|++++|+..  ++..+++.+.  +.++.++++|++|+++++++++     +|++
T Consensus        10 KvalVTGas~GIG~aiA~~la~~Ga~Vvi~~r~~~--~~~~~~~~~~--g~~~~~~~~Dv~d~~~v~~~~~-----~g~i   80 (247)
T 4hp8_A           10 RKALVTGANTGLGQAIAVGLAAAGAEVVCAARRAP--DETLDIIAKD--GGNASALLIDFADPLAAKDSFT-----DAGF   80 (247)
T ss_dssp             CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCC--HHHHHHHHHT--TCCEEEEECCTTSTTTTTTSST-----TTCC
T ss_pred             CEEEEeCcCCHHHHHHHHHHHHcCCEEEEEeCCcH--HHHHHHHHHh--CCcEEEEEccCCCHHHHHHHHH-----hCCC
Confidence            78999999999999999999999999999999754  3555555554  5679999999999988877653     5799


Q ss_pred             eEEEEcCCCCC--CCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccccCC
Q 025509           81 NILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKIN  158 (251)
Q Consensus        81 d~lv~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~  158 (251)
                      |+||||||+..  ++.++++++|++++++|+.|+++++|+++|+|++++    ..|+||++||..+..            
T Consensus        81 DiLVNNAGi~~~~~~~~~~~~~w~~~~~vNl~g~f~~~~~~~~~m~~~g----~~G~IVnisS~~~~~------------  144 (247)
T 4hp8_A           81 DILVNNAGIIRRADSVEFSELDWDEVMDVNLKALFFTTQAFAKELLAKG----RSGKVVNIASLLSFQ------------  144 (247)
T ss_dssp             CEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT----CCEEEEEECCGGGTS------------
T ss_pred             CEEEECCCCCCCCCcccccHHHHHHHHHHHhHHHHHHHHHHHHHHHHhC----CCcEEEEEechhhCC------------
Confidence            99999999764  477899999999999999999999999999998862    369999999998877            


Q ss_pred             CCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCCcchhh-hhhhhhhhhhHhhhccccCh
Q 025509          159 DPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRHNSLFRS-MNTILHALPGIAGKCLLKNV  237 (251)
Q Consensus       159 ~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~  237 (251)
                         +.++.++|++||+|+.+|+|+||.|++++|  ||||+|+||+|+|||++....... ...+...+|    -..+-.|
T Consensus       145 ---g~~~~~~Y~asKaav~~ltr~lA~Ela~~g--IrVNaV~PG~i~T~~~~~~~~~~~~~~~~~~~~P----lgR~g~p  215 (247)
T 4hp8_A          145 ---GGIRVPSYTAAKHGVAGLTKLLANEWAAKG--INVNAIAPGYIETNNTEALRADAARNKAILERIP----AGRWGHS  215 (247)
T ss_dssp             ---CCSSCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECSBCSGGGHHHHTSHHHHHHHHTTCT----TSSCBCT
T ss_pred             ---CCCCChHHHHHHHHHHHHHHHHHHHHhhcC--eEEEEEeeCCCCCcchhhcccCHHHHHHHHhCCC----CCCCcCH
Confidence               778889999999999999999999999999  999999999999999875332222 122222333    2445567


Q ss_pred             HHHHHH
Q 025509          238 QQVILN  243 (251)
Q Consensus       238 ~~~~~~  243 (251)
                      ++.+..
T Consensus       216 eeiA~~  221 (247)
T 4hp8_A          216 EDIAGA  221 (247)
T ss_dssp             HHHHHH
T ss_pred             HHHHHH
Confidence            776654

>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A

Probab=100.00  E-value=2.3e-40  Score=276.15  Aligned_cols=214  Identities=16%  Similarity=0.154  Sum_probs=180.6

Q ss_pred             CEEEEECCCC--hhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCC
Q 025509            1 MDIVITGATS--GIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHH   78 (251)
Q Consensus         1 k~vlItG~s~--gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g   78 (251)
                      |++|||||++  |||+++|+.|+++|++|++++|+++.++++.+.+.+.. +.++.++++|++++++++++++++.+++|
T Consensus         7 K~alVTGaa~~~GIG~aiA~~la~~Ga~Vvi~~r~~~~~~~~~~~~~~~~-~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G   85 (256)
T 4fs3_A            7 KTYVIMGIANKRSIAFGVAKVLDQLGAKLVFTYRKERSRKELEKLLEQLN-QPEAHLYQIDVQSDEEVINGFEQIGKDVG   85 (256)
T ss_dssp             CEEEEECCCSTTCHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHGGGT-CSSCEEEECCTTCHHHHHHHHHHHHHHHC
T ss_pred             CEEEEECCCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcC-CCcEEEEEccCCCHHHHHHHHHHHHHHhC
Confidence            7899999865  99999999999999999999999988888877776543 55789999999999999999999999999


Q ss_pred             CeeEEEEcCCCCC------CCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCc
Q 025509           79 QLNILINNAGIMG------TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGI  152 (251)
Q Consensus        79 ~id~lv~~ag~~~------~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~  152 (251)
                      ++|+||||||+..      +..+.++++|+..+++|+.+++.+++.+.+++.+       +|+||++||.++..      
T Consensus        86 ~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~-------~G~IVnisS~~~~~------  152 (256)
T 4fs3_A           86 NIDGVYHSIAFANMEDLRGRFSETSREGFLLAQDISSYSLTIVAHEAKKLMPE-------GGSIVATTYLGGEF------  152 (256)
T ss_dssp             CCSEEEECCCCCCGGGGTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCTT-------CEEEEEEECGGGTS------
T ss_pred             CCCEEEeccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHhcc-------CCEEEEEecccccc------
Confidence            9999999999753      2346788899999999999999999999887643       68999999998877      


Q ss_pred             ccccCCCCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCCcchhh-hhhhhhhhhhHhhh
Q 025509          153 RFDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRHNSLFRS-MNTILHALPGIAGK  231 (251)
Q Consensus       153 ~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~~~~~~~-~~~~~~~~~~~~~~  231 (251)
                               +.+++..|++||+|+.+|+++||.|++++|  ||||+|+||+++|++.+.....+. ...+....|.    
T Consensus       153 ---------~~~~~~~Y~asKaal~~ltr~lA~Ela~~g--IrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~Pl----  217 (256)
T 4fs3_A          153 ---------AVQNYNVMGVAKASLEANVKYLALDLGPDN--IRVNAISAGPIRTLSAKGVGGFNTILKEIKERAPL----  217 (256)
T ss_dssp             ---------CCTTTHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECCCCSGGGTTCTTHHHHHHHHHHHSTT----
T ss_pred             ---------CcccchhhHHHHHHHHHHHHHHHHHhCccC--eEEEEEecCCCCChhhhhccCCHHHHHHHHhcCCC----
Confidence                     778889999999999999999999999999  999999999999999876543222 2233333332    


Q ss_pred             ccccChHHHHHH
Q 025509          232 CLLKNVQQVILN  243 (251)
Q Consensus       232 ~~~~~~~~~~~~  243 (251)
                      ...-+|++.+..
T Consensus       218 ~R~g~peevA~~  229 (256)
T 4fs3_A          218 KRNVDQVEVGKT  229 (256)
T ss_dssp             SSCCCHHHHHHH
T ss_pred             CCCcCHHHHHHH
Confidence            345567777654

>4h15_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, nysgrc; HET: MSE; 1.45A {Sinorhizobium meliloti} PDB: 4h16_A*

Probab=100.00  E-value=1.2e-40  Score=278.05  Aligned_cols=177  Identities=20%  Similarity=0.231  Sum_probs=159.6

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      |++|||||++|||+++|++|+++|++|++++|+...          .  .....++++|++++++++++++++.+++|++
T Consensus        12 K~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~----------~--~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~i   79 (261)
T 4h15_A           12 KRALITAGTKGAGAATVSLFLELGAQVLTTARARPE----------G--LPEELFVEADLTTKEGCAIVAEATRQRLGGV   79 (261)
T ss_dssp             CEEEESCCSSHHHHHHHHHHHHTTCEEEEEESSCCT----------T--SCTTTEEECCTTSHHHHHHHHHHHHHHTSSC
T ss_pred             CEEEEeccCcHHHHHHHHHHHHcCCEEEEEECCchh----------C--CCcEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence            789999999999999999999999999999997542          1  2345678999999999999999999999999


Q ss_pred             eEEEEcCCCCC----CCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCccccc
Q 025509           81 NILINNAGIMG----TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDK  156 (251)
Q Consensus        81 d~lv~~ag~~~----~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~  156 (251)
                      |+||||||+..    ++.++++++|++.+++|+.+++.++|+++|+|+++     +.|+||++||..+..          
T Consensus        80 DilVnnAG~~~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~-----~~G~Iv~isS~~~~~----------  144 (261)
T 4h15_A           80 DVIVHMLGGSSAAGGGFSALSDDDWYNELSLNLFAAVRLDRQLVPDMVAR-----GSGVVVHVTSIQRVL----------  144 (261)
T ss_dssp             SEEEECCCCCCCCSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----TCEEEEEECCGGGTS----------
T ss_pred             CEEEECCCCCccCCCCcccCCHHHHHHHHHHHhHHHHHHHHhhchhhhhc-----CCceEEEEEehhhcc----------
Confidence            99999999642    35688999999999999999999999999999987     579999999988776          


Q ss_pred             CCCCCCCC-cccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccC
Q 025509          157 INDPSGYN-GFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  211 (251)
Q Consensus       157 ~~~~~~~~-~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  211 (251)
                           +.+ +...|++||+|+.+|+++||.|++++|  |+||+|+||+|+||+...
T Consensus       145 -----~~~~~~~~Y~asKaal~~lt~~lA~Ela~~g--IrVN~V~PG~i~T~~~~~  193 (261)
T 4h15_A          145 -----PLPESTTAYAAAKAALSTYSKAMSKEVSPKG--VRVVRVSPGWIETEASVR  193 (261)
T ss_dssp             -----CCTTTCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECCBCCHHHHH
T ss_pred             -----CCCCccHHHHHHHHHHHHHHHHHHHHhhhhC--eEEEEEeCCCcCCcchhh
Confidence                 444 567899999999999999999999999  999999999999998754

>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}

Probab=100.00  E-value=6.9e-40  Score=273.25  Aligned_cols=187  Identities=27%  Similarity=0.357  Sum_probs=172.0

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      |++|||||++|||+++|++|+++|++|++++|+.+.+++..+++.+.  +.++.++++|++|.++++++++++.+++|++
T Consensus        13 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i   90 (256)
T 3gaf_A           13 AVAIVTGAAAGIGRAIAGTFAKAGASVVVTDLKSEGAEAVAAAIRQA--GGKAIGLECNVTDEQHREAVIKAALDQFGKI   90 (256)
T ss_dssp             CEEEECSCSSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHHHHT--TCCEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCcEEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence            68999999999999999999999999999999999888888888665  5679999999999999999999999999999


Q ss_pred             eEEEEcCCCCCC-CCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccccCCC
Q 025509           81 NILINNAGIMGT-PFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKIND  159 (251)
Q Consensus        81 d~lv~~ag~~~~-~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~  159 (251)
                      |+||||||+..+ ..+.+.++|++.+++|+.+++.++++++|+|+++     +.|+||++||.++..             
T Consensus        91 d~lv~nAg~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~-----~~g~iv~isS~~~~~-------------  152 (256)
T 3gaf_A           91 TVLVNNAGGGGPKPFDMPMSDFEWAFKLNLFSLFRLSQLAAPHMQKA-----GGGAILNISSMAGEN-------------  152 (256)
T ss_dssp             CEEEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT-----TCEEEEEECCGGGTC-------------
T ss_pred             CEEEECCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-----CCcEEEEEcCHHHcC-------------
Confidence            999999997643 3378899999999999999999999999999885     568999999988876             


Q ss_pred             CCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccC
Q 025509          160 PSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  211 (251)
Q Consensus       160 ~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  211 (251)
                        +.++...|++||+|+++|+++++.|++++|  |+||+|+||+++|++...
T Consensus       153 --~~~~~~~Y~asKaa~~~~~~~la~e~~~~g--i~vn~v~PG~v~T~~~~~  200 (256)
T 3gaf_A          153 --TNVRMASYGSSKAAVNHLTRNIAFDVGPMG--IRVNAIAPGAIKTDALAT  200 (256)
T ss_dssp             --CCTTCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECCBCCHHHHH
T ss_pred             --CCCCchHHHHHHHHHHHHHHHHHHHHhhhC--cEEEEEEEccccCchhhh
Confidence              677888999999999999999999999999  999999999999998764

>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E

Probab=100.00  E-value=1.7e-39  Score=269.68  Aligned_cols=185  Identities=28%  Similarity=0.401  Sum_probs=169.9

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      |++|||||++|||+++|++|+++|++|++++|+++.+++..+++     +....++++|++|+++++++++++.+++|++
T Consensus        10 k~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i   84 (248)
T 3op4_A           10 KVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYL-----GDNGKGMALNVTNPESIEAVLKAITDEFGGV   84 (248)
T ss_dssp             CEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHH-----GGGEEEEECCTTCHHHHHHHHHHHHHHHCCC
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-----cccceEEEEeCCCHHHHHHHHHHHHHHcCCC
Confidence            68999999999999999999999999999999998888877766     3457889999999999999999999999999


Q ss_pred             eEEEEcCCCCC--CCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccccCC
Q 025509           81 NILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKIN  158 (251)
Q Consensus        81 d~lv~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~  158 (251)
                      |+||||||+..  ++.+.+.++|++.+++|+.+++.++++++|+|+++     +.|+||++||..+..            
T Consensus        85 D~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~-----~~g~iv~isS~~~~~------------  147 (248)
T 3op4_A           85 DILVNNAGITRDNLLMRMKEEEWSDIMETNLTSIFRLSKAVLRGMMKK-----RQGRIINVGSVVGTM------------  147 (248)
T ss_dssp             SEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----TCEEEEEECCHHHHH------------
T ss_pred             CEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc-----CCCEEEEEcchhhcC------------
Confidence            99999999764  35678899999999999999999999999999886     578999999998877            


Q ss_pred             CCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCC
Q 025509          159 DPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRHN  212 (251)
Q Consensus       159 ~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~~  212 (251)
                         +.+++..|++||+|+++|+++++.|++++|  |+||+|+||+++|++.+..
T Consensus       148 ---~~~~~~~Y~asK~a~~~l~~~la~e~~~~g--i~vn~v~PG~v~T~~~~~~  196 (248)
T 3op4_A          148 ---GNAGQANYAAAKAGVIGFTKSMAREVASRG--VTVNTVAPGFIETDMTKAL  196 (248)
T ss_dssp             ---CCTTCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECSBSSTTTTTS
T ss_pred             ---CCCCChHHHHHHHHHHHHHHHHHHHHHHhC--eEEEEEeeCCCCCchhhhc
Confidence               677889999999999999999999999999  9999999999999998754

>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}

Probab=100.00  E-value=2.8e-39  Score=268.95  Aligned_cols=187  Identities=20%  Similarity=0.250  Sum_probs=163.6

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      |++|||||++|||+++|++|+++|++|++++|+.+++++..+++.+.  +.++.++++|++|.++++++++++.++ |++
T Consensus         8 k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~v~~~~~~~~~~-g~i   84 (252)
T 3h7a_A            8 ATVAVIGAGDYIGAEIAKKFAAEGFTVFAGRRNGEKLAPLVAEIEAA--GGRIVARSLDARNEDEVTAFLNAADAH-APL   84 (252)
T ss_dssp             CEEEEECCSSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHT--TCEEEEEECCTTCHHHHHHHHHHHHHH-SCE
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCeEEEEECcCCCHHHHHHHHHHHHhh-CCc
Confidence            68999999999999999999999999999999999999998888765  568999999999999999999999888 999


Q ss_pred             eEEEEcCCCCC--CCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccccCC
Q 025509           81 NILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKIN  158 (251)
Q Consensus        81 d~lv~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~  158 (251)
                      |+||||||+..  ++.+.+.++|++.+++|+.|++.++++++|+|+++     +.|+||++||.++..            
T Consensus        85 d~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~-----~~g~iv~isS~~~~~------------  147 (252)
T 3h7a_A           85 EVTIFNVGANVNFPILETTDRVFRKVWEMACWAGFVSGRESARLMLAH-----GQGKIFFTGATASLR------------  147 (252)
T ss_dssp             EEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----TCEEEEEEEEGGGTC------------
T ss_pred             eEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-----CCcEEEEECCHHHcC------------
Confidence            99999999764  35678899999999999999999999999999886     468999999988876            


Q ss_pred             CCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEE-EEeeCCcccCCcccCC
Q 025509          159 DPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITA-NSVHPGAIATNIIRHN  212 (251)
Q Consensus       159 ~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v-~~v~Pg~v~t~~~~~~  212 (251)
                         +.++...|++||+|+++|+++|+.|+++.|  |+| |+|+||+++|++.+..
T Consensus       148 ---~~~~~~~Y~asKaa~~~l~~~la~e~~~~g--i~v~n~v~PG~v~T~~~~~~  197 (252)
T 3h7a_A          148 ---GGSGFAAFASAKFGLRAVAQSMARELMPKN--IHVAHLIIDSGVDTAWVRER  197 (252)
T ss_dssp             ---CCTTCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEEC-----------
T ss_pred             ---CCCCCccHHHHHHHHHHHHHHHHHHhhhcC--CEEEEEecCCccCChhhhcc
Confidence               677888999999999999999999999999  999 9999999999998754

>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*

Probab=100.00  E-value=7.5e-40  Score=274.30  Aligned_cols=189  Identities=21%  Similarity=0.212  Sum_probs=174.5

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      |++|||||++|||+++|++|+++|++|++++|+.+++++..+++.+..++..+.++++|++|.++++++++++.+.+|++
T Consensus         9 k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i   88 (265)
T 3lf2_A            9 AVAVVTGGSSGIGLATVELLLEAGAAVAFCARDGERLRAAESALRQRFPGARLFASVCDVLDALQVRAFAEACERTLGCA   88 (265)
T ss_dssp             CEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHHHHHHHCSC
T ss_pred             CEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCCHHHHHHHHHHHHHHcCCC
Confidence            68999999999999999999999999999999999999998888876656669999999999999999999999999999


Q ss_pred             eEEEEcCCCCC--CCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccccCC
Q 025509           81 NILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKIN  158 (251)
Q Consensus        81 d~lv~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~  158 (251)
                      |+||||||+..  ++.+.+.++|++.+++|+.+++.++++++|+|+++     +.|+||++||..+..            
T Consensus        89 d~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~-----~~g~iv~isS~~~~~------------  151 (265)
T 3lf2_A           89 SILVNNAGQGRVSTFAETTDEAWSEELQLKFFSVIHPVRAFLPQLESR-----ADAAIVCVNSLLASQ------------  151 (265)
T ss_dssp             SEEEECCCCCCCBCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTS-----TTEEEEEEEEGGGTS------------
T ss_pred             CEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcc-----CCeEEEEECCcccCC------------
Confidence            99999999754  36678999999999999999999999999999875     478999999988876            


Q ss_pred             CCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccC
Q 025509          159 DPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  211 (251)
Q Consensus       159 ~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  211 (251)
                         +.++...|++||+|+++|+++++.|++++|  |+||+|+||+++|++...
T Consensus       152 ---~~~~~~~Y~asKaa~~~l~~~la~e~~~~g--i~vn~v~PG~v~t~~~~~  199 (265)
T 3lf2_A          152 ---PEPHMVATSAARAGVKNLVRSMAFEFAPKG--VRVNGILIGLVESGQWRR  199 (265)
T ss_dssp             ---CCTTBHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECSBCCHHHHH
T ss_pred             ---CCCCchhhHHHHHHHHHHHHHHHHHhcccC--eEEEEEEeCcCcCchhhh
Confidence               677889999999999999999999999999  999999999999998654

>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0

Probab=100.00  E-value=2.2e-39  Score=266.98  Aligned_cols=184  Identities=19%  Similarity=0.184  Sum_probs=163.7

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      |++|||||++|||+++|++|+++|++|++++|+.+++++..+++     +..+.++++|+++.++++++++++.+++|++
T Consensus         4 k~vlVTGas~GIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~i   78 (235)
T 3l6e_A            4 GHIIVTGAGSGLGRALTIGLVERGHQVSMMGRRYQRLQQQELLL-----GNAVIGIVADLAHHEDVDVAFAAAVEWGGLP   78 (235)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH-----GGGEEEEECCTTSHHHHHHHHHHHHHHHCSC
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh-----cCCceEEECCCCCHHHHHHHHHHHHHhcCCC
Confidence            68999999999999999999999999999999998888877766     2368999999999999999999999999999


Q ss_pred             eEEEEcCCCCC--CCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccccCC
Q 025509           81 NILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKIN  158 (251)
Q Consensus        81 d~lv~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~  158 (251)
                      |+||||||+..  ++.+.+.++|++.+++|+.|++.++++++|+|+++      +++||++||.++..            
T Consensus        79 d~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~------~~~iv~isS~~~~~------------  140 (235)
T 3l6e_A           79 ELVLHCAGTGEFGPVGVYTAEQIRRVMESNLVSTILVAQQTVRLIGER------GGVLANVLSSAAQV------------  140 (235)
T ss_dssp             SEEEEECCCC------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTT------CEEEEEECCEECCS------------
T ss_pred             cEEEECCCCCCCCChHhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc------CCEEEEEeCHHhcC------------
Confidence            99999999753  35678899999999999999999999999999774      46999999988776            


Q ss_pred             CCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCC
Q 025509          159 DPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRHN  212 (251)
Q Consensus       159 ~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~~  212 (251)
                         +.++...|++||+|+++|+++|+.|+++.|  |+||+|+||+++|++....
T Consensus       141 ---~~~~~~~Y~asKaa~~~~~~~la~e~~~~g--i~v~~v~PG~v~T~~~~~~  189 (235)
T 3l6e_A          141 ---GKANESLYCASKWGMRGFLESLRAELKDSP--LRLVNLYPSGIRSEFWDNT  189 (235)
T ss_dssp             ---SCSSHHHHHHHHHHHHHHHHHHHHHTTTSS--EEEEEEEEEEECCCC----
T ss_pred             ---CCCCCcHHHHHHHHHHHHHHHHHHHhhccC--CEEEEEeCCCccCcchhcc
Confidence               677888999999999999999999999999  9999999999999997653

>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}

Probab=100.00  E-value=1.9e-39  Score=269.70  Aligned_cols=189  Identities=24%  Similarity=0.327  Sum_probs=167.3

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCC-CceEEEEecCCCHHHHHHHHHHHHhcCCC
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPS-AKVDAMELDLSSLASVRNFASEYNIQHHQ   79 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~-~~v~~~~~D~~~~~~i~~~~~~~~~~~g~   79 (251)
                      |++|||||++|||+++|++|+++|++|++++|+.+++++..+++.+..++ ..+.++++|+++.++++++++++.+++|+
T Consensus         8 k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   87 (250)
T 3nyw_A            8 GLAIITGASQGIGAVIAAGLATDGYRVVLIARSKQNLEKVHDEIMRSNKHVQEPIVLPLDITDCTKADTEIKDIHQKYGA   87 (250)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHHTCEEEEEESCHHHHHHHHHHHHHHCTTSCCCEEEECCTTCHHHHHHHHHHHHHHHCC
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhccccCcceEEeccCCCHHHHHHHHHHHHHhcCC
Confidence            68999999999999999999999999999999999999999888876544 67899999999999999999999999999


Q ss_pred             eeEEEEcCCCCCC-CCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccccCC
Q 025509           80 LNILINNAGIMGT-PFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKIN  158 (251)
Q Consensus        80 id~lv~~ag~~~~-~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~  158 (251)
                      +|+||||||+... ..+.+.++|++.+++|+.+++.++++++|+|+++     +.|+||++||.++..            
T Consensus        88 iD~lvnnAg~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~-----~~g~iv~isS~~~~~------------  150 (250)
T 3nyw_A           88 VDILVNAAAMFMDGSLSEPVDNFRKIMEINVIAQYGILKTVTEIMKVQ-----KNGYIFNVASRAAKY------------  150 (250)
T ss_dssp             EEEEEECCCCCCCCCCSCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----TCEEEEEECC-----------------
T ss_pred             CCEEEECCCcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-----CCeEEEEEccHHhcC------------
Confidence            9999999997643 3367889999999999999999999999999886     468999999988775            


Q ss_pred             CCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccC
Q 025509          159 DPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  211 (251)
Q Consensus       159 ~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  211 (251)
                         +.+....|++||+|+++|+++++.|+++.|  |+||+|+||+++|++...
T Consensus       151 ---~~~~~~~Y~asKaa~~~l~~~la~e~~~~g--i~vn~v~PG~v~T~~~~~  198 (250)
T 3nyw_A          151 ---GFADGGIYGSTKFALLGLAESLYRELAPLG--IRVTTLCPGWVNTDMAKK  198 (250)
T ss_dssp             -----CCTTHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEESSBCSHHHHH
T ss_pred             ---CCCCCcchHHHHHHHHHHHHHHHHHhhhcC--cEEEEEecCcccCchhhh
Confidence               445578999999999999999999999999  999999999999998764

>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A*

Probab=100.00  E-value=5.1e-39  Score=268.31  Aligned_cols=189  Identities=24%  Similarity=0.301  Sum_probs=172.2

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEE-ecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCC
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMG-VRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQ   79 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~-~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~   79 (251)
                      |++|||||++|||+++|++|+++|++|+++ +|+.+.+++..+++.+.  +.++.++++|++|.++++++++++.+++|+
T Consensus         5 k~vlVTGas~gIG~aia~~l~~~G~~vv~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   82 (258)
T 3oid_A            5 KCALVTGSSRGVGKAAAIRLAENGYNIVINYARSKKAALETAEEIEKL--GVKVLVVKANVGQPAKIKEMFQQIDETFGR   82 (258)
T ss_dssp             CEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTT--TCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CEEEEecCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhc--CCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            689999999999999999999999999987 89888888888877654  567999999999999999999999999999


Q ss_pred             eeEEEEcCCCCC--CCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccccC
Q 025509           80 LNILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKI  157 (251)
Q Consensus        80 id~lv~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~  157 (251)
                      +|+||||||+..  ++.+.+.++|++.+++|+.+++.++++++|+|+++     +.|+||++||.++..           
T Consensus        83 id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~-----~~g~iv~isS~~~~~-----------  146 (258)
T 3oid_A           83 LDVFVNNAASGVLRPVMELEETHWDWTMNINAKALLFCAQEAAKLMEKN-----GGGHIVSISSLGSIR-----------  146 (258)
T ss_dssp             CCEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTT-----TCEEEEEEEEGGGTS-----------
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-----CCcEEEEECchhhCC-----------
Confidence            999999999753  46678899999999999999999999999999885     468999999988776           


Q ss_pred             CCCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCCc
Q 025509          158 NDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRHNS  213 (251)
Q Consensus       158 ~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~~~  213 (251)
                          +.+++..|++||+|+++|+++++.|++++|  |+||+|+||+++|++.+...
T Consensus       147 ----~~~~~~~Y~asKaa~~~l~~~la~e~~~~g--i~vn~v~PG~v~T~~~~~~~  196 (258)
T 3oid_A          147 ----YLENYTTVGVSKAALEALTRYLAVELSPKQ--IIVNAVSGGAIDTDALKHFP  196 (258)
T ss_dssp             ----BCTTCHHHHHHHHHHHHHHHHHHHHTGGGT--EEEEEEEECCBCSGGGGGCT
T ss_pred             ----CCCCcHHHHHHHHHHHHHHHHHHHHHhhcC--cEEEEEeeCCCcChhhhhcc
Confidence                677888999999999999999999999999  99999999999999987643

>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=100.00  E-value=6.1e-39  Score=268.40  Aligned_cols=190  Identities=27%  Similarity=0.369  Sum_probs=172.5

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      |++|||||++|||+++|++|+++|++|++++|+.+++++..+++.+.. +.++.++++|++++++++++++++.+++|++
T Consensus        11 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i   89 (262)
T 3pk0_A           11 RSVVVTGGTKGIGRGIATVFARAGANVAVAGRSTADIDACVADLDQLG-SGKVIGVQTDVSDRAQCDALAGRAVEEFGGI   89 (262)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTS-SSCEEEEECCTTSHHHHHHHHHHHHHHHSCC
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhC-CCcEEEEEcCCCCHHHHHHHHHHHHHHhCCC
Confidence            689999999999999999999999999999999999988888886642 3579999999999999999999999999999


Q ss_pred             eEEEEcCCCCC--CCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccccCC
Q 025509           81 NILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKIN  158 (251)
Q Consensus        81 d~lv~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~  158 (251)
                      |+||||||+..  ++.+.++++|++.+++|+.+++.++++++|+|+++     +.|+||++||..+...           
T Consensus        90 d~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~-----~~g~iv~isS~~~~~~-----------  153 (262)
T 3pk0_A           90 DVVCANAGVFPDAPLATMTPEQLNGIFAVNVNGTFYAVQACLDALIAS-----GSGRVVLTSSITGPIT-----------  153 (262)
T ss_dssp             SEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----SSCEEEEECCSBTTTB-----------
T ss_pred             CEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-----CCcEEEEEechhhccC-----------
Confidence            99999999763  46678999999999999999999999999999886     4689999999876521           


Q ss_pred             CCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCC
Q 025509          159 DPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRHN  212 (251)
Q Consensus       159 ~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~~  212 (251)
                         +.+++..|++||+|+++|+++++.|++++|  |+||+|+||++.|++....
T Consensus       154 ---~~~~~~~Y~asK~a~~~l~~~la~e~~~~g--i~vn~v~PG~v~t~~~~~~  202 (262)
T 3pk0_A          154 ---GYPGWSHYGATKAAQLGFMRTAAIELAPHK--ITVNAIMPGNIMTEGLLEN  202 (262)
T ss_dssp             ---CCTTCHHHHHHHHHHHHHHHHHHHHHGGGT--CEEEEEEECSBCCHHHHTT
T ss_pred             ---CCCCChhhHHHHHHHHHHHHHHHHHHHhhC--cEEEEEEeCcCcCcccccc
Confidence               667888999999999999999999999999  9999999999999987653

>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A*

Probab=100.00  E-value=3.8e-39  Score=267.37  Aligned_cols=186  Identities=28%  Similarity=0.370  Sum_probs=170.4

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      |++|||||++|||+++|++|+++|++|++++|+.+++++..+++     +.++.++++|++|+++++++++++.+++|++
T Consensus         7 k~vlVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i   81 (247)
T 3rwb_A            7 KTALVTGAAQGIGKAIAARLAADGATVIVSDINAEGAKAAAASI-----GKKARAIAADISDPGSVKALFAEIQALTGGI   81 (247)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHH-----CTTEEECCCCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-----CCceEEEEcCCCCHHHHHHHHHHHHHHCCCC
Confidence            68999999999999999999999999999999988888777666     5679999999999999999999999999999


Q ss_pred             eEEEEcCCCCC--CCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccccCC
Q 025509           81 NILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKIN  158 (251)
Q Consensus        81 d~lv~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~  158 (251)
                      |+||||||+..  ++.+.+.++|++.+++|+.+++.++++++|+|++++    ..|+||++||..+..            
T Consensus        82 d~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~----~~g~iv~isS~~~~~------------  145 (247)
T 3rwb_A           82 DILVNNASIVPFVAWDDVDLDHWRKIIDVNLTGTFIVTRAGTDQMRAAG----KAGRVISIASNTFFA------------  145 (247)
T ss_dssp             SEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT----CCEEEEEECCTHHHH------------
T ss_pred             CEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC----CCcEEEEECchhhcc------------
Confidence            99999999764  356788999999999999999999999999998862    268999999998876            


Q ss_pred             CCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCC
Q 025509          159 DPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRHN  212 (251)
Q Consensus       159 ~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~~  212 (251)
                         +.+++..|++||+|+++|+++++.|++++|  |+||+|+||+++|++....
T Consensus       146 ---~~~~~~~Y~asKaa~~~~~~~la~e~~~~g--i~vn~v~PG~v~t~~~~~~  194 (247)
T 3rwb_A          146 ---GTPNMAAYVAAKGGVIGFTRALATELGKYN--ITANAVTPGLIESDGVKAS  194 (247)
T ss_dssp             ---TCTTCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECSBCCHHHHTS
T ss_pred             ---CCCCchhhHHHHHHHHHHHHHHHHHhhhcC--eEEEEEeeCcCcCcccccc
Confidence               677889999999999999999999999999  9999999999999987754

>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}

Probab=100.00  E-value=5.1e-39  Score=270.02  Aligned_cols=188  Identities=28%  Similarity=0.361  Sum_probs=173.2

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      |++|||||++|||+++|++|+++|++|++++|+.+.+++..+++.+.  +..+.++.+|++|.++++++++++.+++|++
T Consensus        29 k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i  106 (270)
T 3ftp_A           29 QVAIVTGASRGIGRAIALELARRGAMVIGTATTEAGAEGIGAAFKQA--GLEGRGAVLNVNDATAVDALVESTLKEFGAL  106 (270)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHH--TCCCEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCcEEEEEEeCCCHHHHHHHHHHHHHHcCCC
Confidence            68999999999999999999999999999999999888888888765  5678899999999999999999999999999


Q ss_pred             eEEEEcCCCCC--CCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccccCC
Q 025509           81 NILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKIN  158 (251)
Q Consensus        81 d~lv~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~  158 (251)
                      |+||||||+..  ++.+.+.++|++.+++|+.+++.++++++|.|+++     +.|+||++||.++..            
T Consensus       107 D~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~-----~~g~iv~isS~~~~~------------  169 (270)
T 3ftp_A          107 NVLVNNAGITQDQLAMRMKDDEWDAVIDTNLKAVFRLSRAVLRPMMKA-----RGGRIVNITSVVGSA------------  169 (270)
T ss_dssp             CEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----TCEEEEEECCHHHHH------------
T ss_pred             CEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc-----CCCEEEEECchhhCC------------
Confidence            99999999764  35678899999999999999999999999999886     579999999998877            


Q ss_pred             CCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCC
Q 025509          159 DPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRHN  212 (251)
Q Consensus       159 ~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~~  212 (251)
                         +.+++..|++||+|+++|+++++.|+++.|  |+||+|+||+++|++....
T Consensus       170 ---~~~~~~~Y~asKaa~~~l~~~la~e~~~~g--I~vn~v~PG~v~T~~~~~~  218 (270)
T 3ftp_A          170 ---GNPGQVNYAAAKAGVAGMTRALAREIGSRG--ITVNCVAPGFIDTDMTKGL  218 (270)
T ss_dssp             ---CCTTBHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECSBCSHHHHHS
T ss_pred             ---CCCCchhHHHHHHHHHHHHHHHHHHHhhhC--eEEEEEEeCCCcCcchhhc
Confidence               677889999999999999999999999999  9999999999999987654

>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A*

Probab=100.00  E-value=1.4e-38  Score=263.77  Aligned_cols=188  Identities=28%  Similarity=0.337  Sum_probs=170.4

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEec-CchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCC
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVR-DIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQ   79 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r-~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~   79 (251)
                      |++|||||++|||+++|++|+++|++|+++++ +.+.+++..+++.+.  +.++.++++|++|.++++++++++.+++|+
T Consensus         5 k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~   82 (246)
T 3osu_A            5 KSALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKAK--GVDSFAIQANVADADEVKAMIKEVVSQFGS   82 (246)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT--TSCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhc--CCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            68999999999999999999999999998887 556777777777654  567899999999999999999999999999


Q ss_pred             eeEEEEcCCCCC--CCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccccC
Q 025509           80 LNILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKI  157 (251)
Q Consensus        80 id~lv~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~  157 (251)
                      +|+||||||+..  ++.+.+.++|++.+++|+.+++.++++++|+|+++     +.|+||++||..+..           
T Consensus        83 id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~-----~~g~iv~isS~~~~~-----------  146 (246)
T 3osu_A           83 LDVLVNNAGITRDNLLMRMKEQEWDDVIDTNLKGVFNCIQKATPQMLRQ-----RSGAIINLSSVVGAV-----------  146 (246)
T ss_dssp             CCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----TCEEEEEECCHHHHH-----------
T ss_pred             CCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc-----CCCEEEEEcchhhcC-----------
Confidence            999999999764  35678899999999999999999999999999886     578999999988877           


Q ss_pred             CCCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCC
Q 025509          158 NDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRHN  212 (251)
Q Consensus       158 ~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~~  212 (251)
                          +.++..+|++||+|+++|+++++.|++++|  |+||+|+||++.|++.+..
T Consensus       147 ----~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g--i~vn~v~PG~v~t~~~~~~  195 (246)
T 3osu_A          147 ----GNPGQANYVATKAGVIGLTKSAARELASRG--ITVNAVAPGFIVSDMTDAL  195 (246)
T ss_dssp             ----CCTTCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECSBGGGCCSCS
T ss_pred             ----CCCCChHHHHHHHHHHHHHHHHHHHhcccC--eEEEEEEECCCcCCccccc
Confidence                677888999999999999999999999999  9999999999999998754

>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}

Probab=100.00  E-value=4.9e-39  Score=269.26  Aligned_cols=186  Identities=26%  Similarity=0.337  Sum_probs=164.7

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      |++|||||++|||+++|++|+++|++|++++|+.++++++.+++.+.  +..+.++.+|++|.++++++++++.+++|++
T Consensus         5 k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i   82 (264)
T 3tfo_A            5 KVILITGASGGIGEGIARELGVAGAKILLGARRQARIEAIATEIRDA--GGTALAQVLDVTDRHSVAAFAQAAVDTWGRI   82 (264)
T ss_dssp             CEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHT--TCEEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc--CCcEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence            68999999999999999999999999999999999999988888765  5679999999999999999999999999999


Q ss_pred             eEEEEcCCCCC--CCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccccCC
Q 025509           81 NILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKIN  158 (251)
Q Consensus        81 d~lv~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~  158 (251)
                      |+||||||+..  ++.+.+.++|++++++|+.|++.++++++|+|+++     +.|+||++||.++..            
T Consensus        83 D~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~-----~~g~IV~isS~~~~~------------  145 (264)
T 3tfo_A           83 DVLVNNAGVMPLSPLAAVKVDEWERMIDVNIKGVLWGIGAVLPIMEAQ-----RSGQIINIGSIGALS------------  145 (264)
T ss_dssp             CEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----TCEEEEEECCGGGTC------------
T ss_pred             CEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhC-----CCeEEEEEcCHHHcc------------
Confidence            99999999763  35678999999999999999999999999999886     578999999988876            


Q ss_pred             CCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCC
Q 025509          159 DPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRHN  212 (251)
Q Consensus       159 ~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~~  212 (251)
                         +.++...|++||+|+++|+++|+.|+ + |  |+||+|+||+|+|++....
T Consensus       146 ---~~~~~~~Y~asKaal~~l~~~la~e~-~-g--Irvn~v~PG~v~T~~~~~~  192 (264)
T 3tfo_A          146 ---VVPTAAVYCATKFAVRAISDGLRQES-T-N--IRVTCVNPGVVESELAGTI  192 (264)
T ss_dssp             ---CCTTCHHHHHHHHHHHHHHHHHHHHC-S-S--EEEEEEEECCC--------
T ss_pred             ---cCCCChhHHHHHHHHHHHHHHHHHhC-C-C--CEEEEEecCCCcCcccccc
Confidence               67788899999999999999999998 4 7  9999999999999997654

>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0

Probab=100.00  E-value=1e-38  Score=269.53  Aligned_cols=187  Identities=26%  Similarity=0.264  Sum_probs=168.5

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecC------------chhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHH
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRD------------IAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRN   68 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~------------~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~   68 (251)
                      |++|||||++|||+++|++|+++|++|++++|+            .+.+++..+.+.+.  +..+.++++|++|++++++
T Consensus        11 k~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~v~~   88 (281)
T 3s55_A           11 KTALITGGARGMGRSHAVALAEAGADIAICDRCENSDVVGYPLATADDLAETVALVEKT--GRRCISAKVDVKDRAALES   88 (281)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHT--TCCEEEEECCTTCHHHHHH
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCccccccccccccHHHHHHHHHHHHhc--CCeEEEEeCCCCCHHHHHH
Confidence            689999999999999999999999999999997            44555555555443  5679999999999999999


Q ss_pred             HHHHHHhcCCCeeEEEEcCCCCC--CCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccc
Q 025509           69 FASEYNIQHHQLNILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRL  146 (251)
Q Consensus        69 ~~~~~~~~~g~id~lv~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~  146 (251)
                      +++++.+++|++|+||||||+..  ++.+.+.++|++.+++|+.+++.++++++|+|+++     +.|+||++||..+..
T Consensus        89 ~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~-----~~g~iv~isS~~~~~  163 (281)
T 3s55_A           89 FVAEAEDTLGGIDIAITNAGISTIALLPEVESAQWDEVIGTNLTGTFNTIAAVAPGMIKR-----NYGRIVTVSSMLGHS  163 (281)
T ss_dssp             HHHHHHHHHTCCCEEEECCCCCCCCCTTCCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----TCEEEEEECCGGGGS
T ss_pred             HHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-----CCCEEEEECChhhcC
Confidence            99999999999999999999764  35678999999999999999999999999999886     468999999988876


Q ss_pred             cccCCcccccCCCCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccC
Q 025509          147 AYHEGIRFDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  211 (251)
Q Consensus       147 ~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  211 (251)
                                     +.++...|++||+|+++|+++++.|++++|  |+||+|+||+|+|++...
T Consensus       164 ---------------~~~~~~~Y~asK~a~~~~~~~la~e~~~~g--i~vn~v~PG~v~t~~~~~  211 (281)
T 3s55_A          164 ---------------ANFAQASYVSSKWGVIGLTKCAAHDLVGYG--ITVNAVAPGNIETPMTHN  211 (281)
T ss_dssp             ---------------CCTTCHHHHHHHHHHHHHHHHHHHHTGGGT--EEEEEEEECSBCSTTTSS
T ss_pred             ---------------CCCCCchhHHHHHHHHHHHHHHHHHHhhcC--cEEEEEecCcccCccccc
Confidence                           677888999999999999999999999999  999999999999999764

>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0

Probab=100.00  E-value=1.6e-38  Score=267.03  Aligned_cols=184  Identities=26%  Similarity=0.310  Sum_probs=168.8

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      |++|||||++|||+++|++|+++|++|++++|+.+++++..+++     +..+.++.+|++|.++++++++++.+++|++
T Consensus        12 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i   86 (271)
T 3tzq_B           12 KVAIITGACGGIGLETSRVLARAGARVVLADLPETDLAGAAASV-----GRGAVHHVVDLTNEVSVRALIDFTIDTFGRL   86 (271)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSCHHHHHHHH-----CTTCEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHh-----CCCeEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence            68999999999999999999999999999999998888877766     5678999999999999999999999999999


Q ss_pred             eEEEEcCCCCCC----CCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCccccc
Q 025509           81 NILINNAGIMGT----PFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDK  156 (251)
Q Consensus        81 d~lv~~ag~~~~----~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~  156 (251)
                      |+||||||+..+    ..+.+.++|++.+++|+.+++.++++++|+|+++     +.|+||++||..+..          
T Consensus        87 d~lv~nAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~-----~~g~iv~isS~~~~~----------  151 (271)
T 3tzq_B           87 DIVDNNAAHSDPADMLVTQMTVDVWDDTFTVNARGTMLMCKYAIPRLISA-----GGGAIVNISSATAHA----------  151 (271)
T ss_dssp             CEEEECCCCCCTTCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-----TCEEEEEECCGGGTS----------
T ss_pred             CEEEECCCCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-----CCCEEEEECCHHHcC----------
Confidence            999999997622    4477899999999999999999999999999885     578999999988776          


Q ss_pred             CCCCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccC
Q 025509          157 INDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  211 (251)
Q Consensus       157 ~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  211 (251)
                           +.++...|++||+|+++|+++++.|++++|  |+||+|+||+++|++...
T Consensus       152 -----~~~~~~~Y~asKaa~~~l~~~la~e~~~~g--i~vn~v~PG~v~t~~~~~  199 (271)
T 3tzq_B          152 -----AYDMSTAYACTKAAIETLTRYVATQYGRHG--VRCNAIAPGLVRTPRLEV  199 (271)
T ss_dssp             -----BCSSCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECCBCCTTTC-
T ss_pred             -----CCCCChHHHHHHHHHHHHHHHHHHHHhhcC--EEEEEEEeCCCcCccccc
Confidence                 677888999999999999999999999999  999999999999999773

>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}

Probab=100.00  E-value=4.1e-39  Score=270.76  Aligned_cols=187  Identities=22%  Similarity=0.312  Sum_probs=172.7

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      |++|||||++|||+++|++|+++|++|++++|+.+++++..+++.+.  +.++.++++|++|.++++++++++.+++|++
T Consensus        27 k~~lVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i  104 (271)
T 4ibo_A           27 RTALVTGSSRGLGRAMAEGLAVAGARILINGTDPSRVAQTVQEFRNV--GHDAEAVAFDVTSESEIIEAFARLDEQGIDV  104 (271)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHT--TCCEEECCCCTTCHHHHHHHHHHHHHHTCCC
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCceEEEEcCCCCHHHHHHHHHHHHHHCCCC
Confidence            68999999999999999999999999999999999999988888665  5679999999999999999999999999999


Q ss_pred             eEEEEcCCCCC--CCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccccCC
Q 025509           81 NILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKIN  158 (251)
Q Consensus        81 d~lv~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~  158 (251)
                      |+||||||+..  ++.+.+.++|++.+++|+.+++.++++++|+|+++     +.|+||++||..+..            
T Consensus       105 D~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~-----~~g~iV~isS~~~~~------------  167 (271)
T 4ibo_A          105 DILVNNAGIQFRKPMIELETADWQRVIDTNLTSAFMIGREAAKRMIPR-----GYGKIVNIGSLTSEL------------  167 (271)
T ss_dssp             CEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----TCEEEEEECCGGGTS------------
T ss_pred             CEEEECCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-----CCcEEEEEccHHhCC------------
Confidence            99999999763  35678999999999999999999999999999886     468999999988776            


Q ss_pred             CCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccC
Q 025509          159 DPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  211 (251)
Q Consensus       159 ~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  211 (251)
                         +.++...|++||+|+++|+++++.|+++.|  |+||+|+||+++|++.+.
T Consensus       168 ---~~~~~~~Y~asKaa~~~l~~~la~e~~~~g--I~vn~v~PG~v~T~~~~~  215 (271)
T 4ibo_A          168 ---ARATVAPYTVAKGGIKMLTRAMAAEWAQYG--IQANAIGPGYMLTDMNQA  215 (271)
T ss_dssp             ---BCTTCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECSBCSGGGHH
T ss_pred             ---CCCCchhHHHHHHHHHHHHHHHHHHHhhhC--eEEEEEEeccEeCcchhh
Confidence               677888999999999999999999999999  999999999999998764

>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}

Probab=100.00  E-value=7.1e-39  Score=270.13  Aligned_cols=183  Identities=26%  Similarity=0.362  Sum_probs=167.9

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      |++|||||++|||+++|++|+++|++|++++|+.+.+++..+++     +..+.++++|+++.++++++++++.+++|++
T Consensus        28 k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i  102 (277)
T 4dqx_A           28 RVCIVTGGGSGIGRATAELFAKNGAYVVVADVNEDAAVRVANEI-----GSKAFGVRVDVSSAKDAESMVEKTTAKWGRV  102 (277)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHH-----CTTEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-----CCceEEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence            68999999999999999999999999999999988887776664     5679999999999999999999999999999


Q ss_pred             eEEEEcCCCCC--CCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccccCC
Q 025509           81 NILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKIN  158 (251)
Q Consensus        81 d~lv~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~  158 (251)
                      |+||||||+..  ++.+.+.++|++.+++|+.|++.++++++|+|+++     +.|+||++||..+..            
T Consensus       103 D~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~-----~~g~iv~isS~~~~~------------  165 (277)
T 4dqx_A          103 DVLVNNAGFGTTGNVVTIPEETWDRIMSVNVKGIFLCSKYVIPVMRRN-----GGGSIINTTSYTATS------------  165 (277)
T ss_dssp             CEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTT-----TCEEEEEECCGGGTS------------
T ss_pred             CEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc-----CCcEEEEECchhhCc------------
Confidence            99999999754  36678899999999999999999999999999875     468999999988776            


Q ss_pred             CCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCccc
Q 025509          159 DPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIR  210 (251)
Q Consensus       159 ~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~  210 (251)
                         +.++...|++||+|+++|+++++.|++++|  |+||+|+||+++|++..
T Consensus       166 ---~~~~~~~Y~asKaa~~~l~~~la~e~~~~g--i~vn~v~PG~v~T~~~~  212 (277)
T 4dqx_A          166 ---AIADRTAYVASKGAISSLTRAMAMDHAKEG--IRVNAVAPGTIDSPYFT  212 (277)
T ss_dssp             ---CCTTBHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECSBCCHHHH
T ss_pred             ---CCCCChhHHHHHHHHHHHHHHHHHHhhhcC--eEEEEEeeCcCcCchhh
Confidence               677888999999999999999999999999  99999999999999843

>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}

Probab=100.00  E-value=1.3e-38  Score=269.31  Aligned_cols=190  Identities=33%  Similarity=0.369  Sum_probs=171.5

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      |++|||||++|||+++|++|+++|++|++++|+.+.+++..+++.+.  +..+.++++|++|+++++++++++.+++|++
T Consensus        29 k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i  106 (283)
T 3v8b_A           29 PVALITGAGSGIGRATALALAADGVTVGALGRTRTEVEEVADEIVGA--GGQAIALEADVSDELQMRNAVRDLVLKFGHL  106 (283)
T ss_dssp             CEEEEESCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHTTT--TCCEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCcEEEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence            57999999999999999999999999999999998888888877553  5679999999999999999999999999999


Q ss_pred             eEEEEcCCCC---CCCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccccC
Q 025509           81 NILINNAGIM---GTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKI  157 (251)
Q Consensus        81 d~lv~~ag~~---~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~  157 (251)
                      |+||||||+.   .++.+.+.++|++.+++|+.+++.++++++|+|+++     +.|+||++||.++...          
T Consensus       107 D~lVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~-----~~g~Iv~isS~~~~~~----------  171 (283)
T 3v8b_A          107 DIVVANAGINGVWAPIDDLKPFEWDETIAVNLRGTFLTLHLTVPYLKQR-----GGGAIVVVSSINGTRT----------  171 (283)
T ss_dssp             CEEEECCCCCCCBCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----TCEEEEEECCSBTTTB----------
T ss_pred             CEEEECCCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-----CCceEEEEcChhhccC----------
Confidence            9999999975   346788999999999999999999999999999886     5789999999876531          


Q ss_pred             CCCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCC
Q 025509          158 NDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRHN  212 (251)
Q Consensus       158 ~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~~  212 (251)
                         .+.++...|++||+|+++|+++++.|++++|  |+||+|+||+++|++....
T Consensus       172 ---~~~~~~~~Y~asKaa~~~l~~~la~e~~~~g--I~vn~v~PG~v~T~~~~~~  221 (283)
T 3v8b_A          172 ---FTTPGATAYTATKAAQVAIVQQLALELGKHH--IRVNAVCPGAIETNISDNT  221 (283)
T ss_dssp             ---CCSTTCHHHHHHHHHHHHHHHHHHHHTTTTT--EEEEEEEECSBSSCTTCCT
T ss_pred             ---CCCCCchHHHHHHHHHHHHHHHHHHHhCccC--cEEEEEEeCCCcCCccccc
Confidence               1446778999999999999999999999999  9999999999999998754

>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0

Probab=100.00  E-value=1.2e-38  Score=268.90  Aligned_cols=188  Identities=25%  Similarity=0.299  Sum_probs=170.0

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEec-------------CchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHH
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVR-------------DIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVR   67 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r-------------~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~   67 (251)
                      |++|||||++|||+++|++|+++|++|++++|             +.+.+++..+.+.+.  +..+.++++|++|.++++
T Consensus        16 k~~lVTGas~gIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~v~   93 (280)
T 3pgx_A           16 RVAFITGAARGQGRSHAVRLAAEGADIIACDICAPVSASVTYAPASPEDLDETARLVEDQ--GRKALTRVLDVRDDAALR   93 (280)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHTT--TCCEEEEECCTTCHHHHH
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeccccccccccccccCHHHHHHHHHHHHhc--CCeEEEEEcCCCCHHHHH
Confidence            68999999999999999999999999999998             566777777766554  567999999999999999


Q ss_pred             HHHHHHHhcCCCeeEEEEcCCCCC--CCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCcccc
Q 025509           68 NFASEYNIQHHQLNILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHR  145 (251)
Q Consensus        68 ~~~~~~~~~~g~id~lv~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~  145 (251)
                      ++++++.+++|++|+||||||+..  ++.+.+.++|++.+++|+.+++.++++++|+|++++    ..|+||++||..+.
T Consensus        94 ~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~----~~g~iv~isS~~~~  169 (280)
T 3pgx_A           94 ELVADGMEQFGRLDVVVANAGVLSWGRVWELTDEQWDTVIGVNLTGTWRTLRATVPAMIEAG----NGGSIVVVSSSAGL  169 (280)
T ss_dssp             HHHHHHHHHHCCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHC----SCEEEEEECCGGGT
T ss_pred             HHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcC----CCCEEEEEcchhhc
Confidence            999999999999999999999764  356789999999999999999999999999998862    26899999998887


Q ss_pred             ccccCCcccccCCCCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccC
Q 025509          146 LAYHEGIRFDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  211 (251)
Q Consensus       146 ~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  211 (251)
                      .               +.++...|++||+|+++|+++++.|++++|  |+||+|+||+++|++...
T Consensus       170 ~---------------~~~~~~~Y~asKaa~~~~~~~la~e~~~~g--i~vn~v~PG~v~t~~~~~  218 (280)
T 3pgx_A          170 K---------------ATPGNGHYSASKHGLTALTNTLAIELGEYG--IRVNSIHPYSVETPMIEP  218 (280)
T ss_dssp             S---------------CCTTBHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECSBCSTTCCH
T ss_pred             c---------------CCCCchhHHHHHHHHHHHHHHHHHHhhhcC--eEEEEEeeCcccCcccch
Confidence            6               677888999999999999999999999999  999999999999999764

>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae}

Probab=100.00  E-value=4.3e-39  Score=272.75  Aligned_cols=188  Identities=26%  Similarity=0.375  Sum_probs=174.5

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCC---EEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcC
Q 025509            1 MDIVITGATSGIGTETARVLALRGV---HVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQH   77 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~---~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~   77 (251)
                      |++|||||++|||+++|++|+++|+   +|++++|+.+.++++.+++.+..++.++.++++|++|.++++++++++.+++
T Consensus        34 k~~lVTGas~GIG~aia~~l~~~G~~~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~  113 (287)
T 3rku_A           34 KTVLITGASAGIGKATALEYLEASNGDMKLILAARRLEKLEELKKTIDQEFPNAKVHVAQLDITQAEKIKPFIENLPQEF  113 (287)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHCTTCEEEEEECCTTCGGGHHHHHHTSCGGG
T ss_pred             CEEEEecCCChHHHHHHHHHHHcCCCCceEEEEECCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHHHHHhc
Confidence            6899999999999999999999998   9999999999999999999887777889999999999999999999999999


Q ss_pred             CCeeEEEEcCCCCC---CCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCccc
Q 025509           78 HQLNILINNAGIMG---TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRF  154 (251)
Q Consensus        78 g~id~lv~~ag~~~---~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~  154 (251)
                      |++|+||||||+..   ++.+.+.++|++.+++|+.|++.++++++|+|+++     +.|+||++||.++..        
T Consensus       114 g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~-----~~g~IV~isS~~~~~--------  180 (287)
T 3rku_A          114 KDIDILVNNAGKALGSDRVGQIATEDIQDVFDTNVTALINITQAVLPIFQAK-----NSGDIVNLGSIAGRD--------  180 (287)
T ss_dssp             CSCCEEEECCCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----TCCEEEEECCGGGTS--------
T ss_pred             CCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-----CCCeEEEECChhhcC--------
Confidence            99999999999753   35678899999999999999999999999999886     578999999988876        


Q ss_pred             ccCCCCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCccc
Q 025509          155 DKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIR  210 (251)
Q Consensus       155 ~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~  210 (251)
                             +.++...|++||+|+++|+++++.|+++.|  |+||+|+||+|+|++..
T Consensus       181 -------~~~~~~~Y~asKaa~~~l~~~la~e~~~~g--Irvn~v~PG~v~T~~~~  227 (287)
T 3rku_A          181 -------AYPTGSIYCASKFAVGAFTDSLRKELINTK--IRVILIAPGLVETEFSL  227 (287)
T ss_dssp             -------CCTTCHHHHHHHHHHHHHHHHHHHHTTTSS--CEEEEEEESCEESSHHH
T ss_pred             -------CCCCCchHHHHHHHHHHHHHHHHHHhhhcC--CEEEEEeCCcCcCcccc
Confidence                   677888999999999999999999999999  99999999999999854

>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=100.00  E-value=8.8e-39  Score=267.65  Aligned_cols=186  Identities=24%  Similarity=0.310  Sum_probs=171.8

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      |++|||||++|||+++|++|+++|++|++++|+.+++++..+++.+.  +.++.++++|++|+++++++++++.+++|++
T Consensus        12 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i   89 (264)
T 3ucx_A           12 KVVVISGVGPALGTTLARRCAEQGADLVLAARTVERLEDVAKQVTDT--GRRALSVGTDITDDAQVAHLVDETMKAYGRV   89 (264)
T ss_dssp             CEEEEESCCTTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT--TCCEEEEECCTTCHHHHHHHHHHHHHHTSCC
T ss_pred             cEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHHhc--CCcEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence            68999999999999999999999999999999999999988888765  5679999999999999999999999999999


Q ss_pred             eEEEEcCCCC---CCCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccccC
Q 025509           81 NILINNAGIM---GTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKI  157 (251)
Q Consensus        81 d~lv~~ag~~---~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~  157 (251)
                      |+||||||..   .++.+.+.++|++.+++|+.+++.++++++|+|.++      +|+||++||..+..           
T Consensus        90 d~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~------~g~iv~isS~~~~~-----------  152 (264)
T 3ucx_A           90 DVVINNAFRVPSMKPFANTTFEHMRDAIELTVFGALRLIQGFTPALEES------KGAVVNVNSMVVRH-----------  152 (264)
T ss_dssp             SEEEECCCSCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHH------TCEEEEECCGGGGC-----------
T ss_pred             cEEEECCCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc------CCEEEEECcchhcc-----------
Confidence            9999999874   245678899999999999999999999999999885      48999999988876           


Q ss_pred             CCCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccC
Q 025509          158 NDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  211 (251)
Q Consensus       158 ~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  211 (251)
                          +.+++..|++||+|+++|+++++.|++++|  |+||+|+||+|+|++...
T Consensus       153 ----~~~~~~~Y~asKaa~~~~~~~la~e~~~~g--i~vn~v~PG~v~t~~~~~  200 (264)
T 3ucx_A          153 ----SQAKYGAYKMAKSALLAMSQTLATELGEKG--IRVNSVLPGYIWGGTLKS  200 (264)
T ss_dssp             ----CCTTCHHHHHHHHHHHHHHHHHHHHHHTTT--CEEEEEEESSCBSHHHHH
T ss_pred             ----CCCccHHHHHHHHHHHHHHHHHHHHhCccC--eEEEEEecCccccccHHH
Confidence                677888999999999999999999999999  999999999999998764

>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0

Probab=100.00  E-value=1.3e-38  Score=268.34  Aligned_cols=188  Identities=21%  Similarity=0.192  Sum_probs=169.3

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEec-------------CchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHH
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVR-------------DIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVR   67 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r-------------~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~   67 (251)
                      |++|||||++|||+++|++|+++|++|++++|             +.+.+++..+.+.+.  +..+.++.+|++|.++++
T Consensus        12 k~~lVTGas~GIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~v~   89 (277)
T 3tsc_A           12 RVAFITGAARGQGRAHAVRMAAEGADIIAVDIAGKLPSCVPYDPASPDDLSETVRLVEAA--NRRIVAAVVDTRDFDRLR   89 (277)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHHT--TCCEEEEECCTTCHHHHH
T ss_pred             CEEEEECCccHHHHHHHHHHHHcCCEEEEEeccccccccccccccCHHHHHHHHHHHHhc--CCeEEEEECCCCCHHHHH
Confidence            68999999999999999999999999999998             566666666666554  567999999999999999


Q ss_pred             HHHHHHHhcCCCeeEEEEcCCCCCC--CCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCcccc
Q 025509           68 NFASEYNIQHHQLNILINNAGIMGT--PFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHR  145 (251)
Q Consensus        68 ~~~~~~~~~~g~id~lv~~ag~~~~--~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~  145 (251)
                      ++++++.+++|++|+||||||+..+  +.+.+.++|++.+++|+.+++.++++++|+|++++    ..|+||++||.++.
T Consensus        90 ~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~----~~g~iv~isS~~~~  165 (277)
T 3tsc_A           90 KVVDDGVAALGRLDIIVANAGVAAPQAWDDITPEDFRDVMDINVTGTWNTVMAGAPRIIEGG----RGGSIILISSAAGM  165 (277)
T ss_dssp             HHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT----SCEEEEEECCGGGT
T ss_pred             HHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhHHHHHHHHHHHHHHHHhcC----CCCEEEEEccHhhC
Confidence            9999999999999999999997643  56789999999999999999999999999998862    26899999998887


Q ss_pred             ccccCCcccccCCCCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccC
Q 025509          146 LAYHEGIRFDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  211 (251)
Q Consensus       146 ~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  211 (251)
                      .               +.++...|++||+|+++|+++|+.|++++|  |+||+|+||+++|++...
T Consensus       166 ~---------------~~~~~~~Y~asKaa~~~~~~~la~e~~~~g--i~vn~v~PG~v~T~~~~~  214 (277)
T 3tsc_A          166 K---------------MQPFMIHYTASKHAVTGLARAFAAELGKHS--IRVNSVHPGPVNTPMGSG  214 (277)
T ss_dssp             S---------------CCSSCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEESSBSSGGGSH
T ss_pred             C---------------CCCCchhhHHHHHHHHHHHHHHHHHhCccC--eEEEEEEeCCCcCCcccc
Confidence            6               677888999999999999999999999999  999999999999999764

>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}

Probab=100.00  E-value=1.1e-38  Score=269.20  Aligned_cols=187  Identities=29%  Similarity=0.367  Sum_probs=171.1

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      |++|||||++|||+++|++|+++|++|++++|+.+++++..+++.+.  +..+.++.+|++|.++++++++++.+++|++
T Consensus        25 k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i  102 (279)
T 3sju_A           25 QTAFVTGVSSGIGLAVARTLAARGIAVYGCARDAKNVSAAVDGLRAA--GHDVDGSSCDVTSTDEVHAAVAAAVERFGPI  102 (279)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTT--TCCEEEEECCTTCHHHHHHHHHHHHHHHCSC
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCcEEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence            68999999999999999999999999999999999998888888665  5679999999999999999999999999999


Q ss_pred             eEEEEcCCCCC--CCCcCCchhhHHHHHHHHHHHHHHHHHHHH--HHHHhhccCCCCceEEEEcCccccccccCCccccc
Q 025509           81 NILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLD--TMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDK  156 (251)
Q Consensus        81 d~lv~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~--~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~  156 (251)
                      |+||||||+..  ++.+.+.++|++.+++|+.+++.++++++|  .|+++     +.|+||++||.++..          
T Consensus       103 d~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~-----~~g~iV~isS~~~~~----------  167 (279)
T 3sju_A          103 GILVNSAGRNGGGETADLDDALWADVLDTNLTGVFRVTREVLRAGGMREA-----GWGRIVNIASTGGKQ----------  167 (279)
T ss_dssp             CEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSSHHHH-----TCEEEEEECCGGGTS----------
T ss_pred             cEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHhchhhHhhc-----CCcEEEEECChhhcc----------
Confidence            99999999764  356788999999999999999999999999  57765     468999999988876          


Q ss_pred             CCCCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccC
Q 025509          157 INDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  211 (251)
Q Consensus       157 ~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  211 (251)
                           +.++...|++||+|+++|+++++.|+++.|  |+||+|+||+|+|++...
T Consensus       168 -----~~~~~~~Y~asKaa~~~l~~~la~e~~~~g--i~vn~v~PG~v~T~~~~~  215 (279)
T 3sju_A          168 -----GVMYAAPYTASKHGVVGFTKSVGFELAKTG--ITVNAVCPGYVETPMAER  215 (279)
T ss_dssp             -----CCTTCHHHHHHHHHHHHHHHHHHHHTGGGT--EEEEEEEESSBCSHHHHH
T ss_pred             -----CCCCChhHHHHHHHHHHHHHHHHHHHHhhC--cEEEEEeeCcccchHHHH
Confidence                 677888999999999999999999999999  999999999999998653

>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*

Probab=100.00  E-value=1.5e-38  Score=269.13  Aligned_cols=188  Identities=21%  Similarity=0.205  Sum_probs=168.7

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecC----------------chhHHHHHHHHHhhCCCCceEEEEecCCCHH
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRD----------------IAAGKDVKETIVKEIPSAKVDAMELDLSSLA   64 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~----------------~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~   64 (251)
                      |++|||||++|||+++|++|+++|++|++++|+                .+.+++..+++.+.  +.++.++++|+++++
T Consensus        12 k~~lVTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~   89 (286)
T 3uve_A           12 KVAFVTGAARGQGRSHAVRLAQEGADIIAVDICKPIRAGVVDTAIPASTPEDLAETADLVKGH--NRRIVTAEVDVRDYD   89 (286)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCSBTTBCCCSSCCCCHHHHHHHHHHHHTT--TCCEEEEECCTTCHH
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCeEEEEeccccccccccccccccCCHHHHHHHHHHHhhc--CCceEEEEcCCCCHH
Confidence            689999999999999999999999999999987                55666666665543  567999999999999


Q ss_pred             HHHHHHHHHHhcCCCeeEEEEcCCCCCC---CCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcC
Q 025509           65 SVRNFASEYNIQHHQLNILINNAGIMGT---PFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSS  141 (251)
Q Consensus        65 ~i~~~~~~~~~~~g~id~lv~~ag~~~~---~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS  141 (251)
                      +++++++++.+++|++|+||||||+...   +.+.+.++|++++++|+.+++.++++++|+|.++.    ..|+||++||
T Consensus        90 ~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~----~~g~iv~isS  165 (286)
T 3uve_A           90 ALKAAVDSGVEQLGRLDIIVANAGIGNGGDTLDKTSEEDWTEMIDINLAGVWKTVKAGVPHMIAGG----RGGSIILTSS  165 (286)
T ss_dssp             HHHHHHHHHHHHHSCCCEEEECCCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT----SCEEEEEECC
T ss_pred             HHHHHHHHHHHHhCCCCEEEECCcccCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCC----CCcEEEEECc
Confidence            9999999999999999999999997542   55778999999999999999999999999998862    3689999999


Q ss_pred             ccccccccCCcccccCCCCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccC
Q 025509          142 EGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  211 (251)
Q Consensus       142 ~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  211 (251)
                      ..+..               +.++...|++||+|+++|+++|+.|++++|  |+||+|+||+|+|++...
T Consensus       166 ~~~~~---------------~~~~~~~Y~asKaa~~~~~~~la~e~~~~g--I~vn~v~PG~v~T~~~~~  218 (286)
T 3uve_A          166 VGGLK---------------AYPHTGHYVAAKHGVVGLMRAFGVELGQHM--IRVNSVHPTHVKTPMLHN  218 (286)
T ss_dssp             GGGTS---------------CCTTCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEESSBSSTTTSS
T ss_pred             hhhcc---------------CCCCccHHHHHHHHHHHHHHHHHHHhcccC--eEEEEEecCcccCCcccc
Confidence            88876               677888999999999999999999999999  999999999999999864

>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti}

Probab=100.00  E-value=1.4e-38  Score=268.69  Aligned_cols=188  Identities=27%  Similarity=0.299  Sum_probs=170.6

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      |++|||||++|||+++|++|+++|++|++++|+.+++++..+++.+.  +..+.++.+|+++.++++++++++.+++|++
T Consensus         9 k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i   86 (280)
T 3tox_A            9 KIAIVTGASSGIGRAAALLFAREGAKVVVTARNGNALAELTDEIAGG--GGEAAALAGDVGDEALHEALVELAVRRFGGL   86 (280)
T ss_dssp             CEEEESSTTSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHTTT--TCCEEECCCCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc--CCcEEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence            68999999999999999999999999999999999888888877543  5679999999999999999999999999999


Q ss_pred             eEEEEcCCCC---CCCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccccC
Q 025509           81 NILINNAGIM---GTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKI  157 (251)
Q Consensus        81 d~lv~~ag~~---~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~  157 (251)
                      |+||||||+.   .++.+.+.++|++.+++|+.|++.++++++|+|+++     +.|+||++||..+...          
T Consensus        87 D~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~-----~~g~iv~isS~~~~~~----------  151 (280)
T 3tox_A           87 DTAFNNAGALGAMGEISSLSVEGWRETLDTNLTSAFLAAKYQVPAIAAL-----GGGSLTFTSSFVGHTA----------  151 (280)
T ss_dssp             CEEEECCCCCCSCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT-----TCEEEEEECCSBTTTB----------
T ss_pred             CEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-----CCCEEEEEcChhhCcC----------
Confidence            9999999975   335678899999999999999999999999999886     5789999999877621          


Q ss_pred             CCCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccC
Q 025509          158 NDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  211 (251)
Q Consensus       158 ~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  211 (251)
                          +.++..+|++||+|+++|+++++.|+++.|  |+||+|+||+++|++...
T Consensus       152 ----~~~~~~~Y~asKaa~~~l~~~la~e~~~~g--Irvn~v~PG~v~T~~~~~  199 (280)
T 3tox_A          152 ----GFAGVAPYAASKAGLIGLVQALAVELGARG--IRVNALLPGGTDTPANFA  199 (280)
T ss_dssp             ----CCTTCHHHHHHHHHHHHHHHHHHHHHHTTT--EEEEEEEECSBSSTTSGG
T ss_pred             ----CCCCchhHHHHHHHHHHHHHHHHHHhhhcC--eEEEEEEECCCCCchhhh
Confidence                567788999999999999999999999999  999999999999998764

>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}

Probab=100.00  E-value=4.4e-39  Score=269.81  Aligned_cols=189  Identities=28%  Similarity=0.362  Sum_probs=172.7

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      |++|||||++|||+++|++|+++|++|++++|+.+++++..+++.+.. +.++.++++|++|.++++++++++.+++|++
T Consensus        21 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i   99 (266)
T 4egf_A           21 KRALITGATKGIGADIARAFAAAGARLVLSGRDVSELDAARRALGEQF-GTDVHTVAIDLAEPDAPAELARRAAEAFGGL   99 (266)
T ss_dssp             CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHH-CCCEEEEECCTTSTTHHHHHHHHHHHHHTSC
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhc-CCcEEEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence            689999999999999999999999999999999999988888886633 5679999999999999999999999999999


Q ss_pred             eEEEEcCCCCC--CCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccccCC
Q 025509           81 NILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKIN  158 (251)
Q Consensus        81 d~lv~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~  158 (251)
                      |+||||||+..  ++.+.+.++|++.+++|+.+++.++++++|+|++++    ..|+||++||..+..            
T Consensus       100 d~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~----~~g~iv~isS~~~~~------------  163 (266)
T 4egf_A          100 DVLVNNAGISHPQPVVDTDPQLFDATIAVNLRAPALLASAVGKAMVAAG----EGGAIITVASAAALA------------  163 (266)
T ss_dssp             SEEEEECCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT----SCEEEEEECCGGGTS------------
T ss_pred             CEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC----CCeEEEEEcchhhcc------------
Confidence            99999999764  356788999999999999999999999999998862    368999999988776            


Q ss_pred             CCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccC
Q 025509          159 DPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  211 (251)
Q Consensus       159 ~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  211 (251)
                         +.++...|++||+|+++|+++++.|++++|  |+||+|+||+|+|++.+.
T Consensus       164 ---~~~~~~~Y~asK~a~~~l~~~la~e~~~~g--I~vn~v~PG~v~T~~~~~  211 (266)
T 4egf_A          164 ---PLPDHYAYCTSKAGLVMATKVLARELGPHG--IRANSVCPTVVLTEMGQR  211 (266)
T ss_dssp             ---CCTTCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEESCBCSHHHHH
T ss_pred             ---CCCCChHHHHHHHHHHHHHHHHHHHHhhhC--eEEEEEEeCCCcCchhhh
Confidence               677888999999999999999999999999  999999999999998664

>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}

Probab=100.00  E-value=1.1e-38  Score=266.05  Aligned_cols=188  Identities=21%  Similarity=0.230  Sum_probs=169.5

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      |++|||||++|||+++|++|+++|++|++++|+.+++++..+++.+.  +.++.++++|++++++++++++++.+++|++
T Consensus         7 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i   84 (257)
T 3imf_A            7 KVVIITGGSSGMGKGMATRFAKEGARVVITGRTKEKLEEAKLEIEQF--PGQILTVQMDVRNTDDIQKMIEQIDEKFGRI   84 (257)
T ss_dssp             CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCS--TTCEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            68999999999999999999999999999999999888888777543  4579999999999999999999999999999


Q ss_pred             eEEEEcCCCCC--CCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccccCC
Q 025509           81 NILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKIN  158 (251)
Q Consensus        81 d~lv~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~  158 (251)
                      |+||||||+..  ++.+.+.++|++.+++|+.+++.++++++|+|.++    +..|+||++||..+..            
T Consensus        85 d~lv~nAg~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~----~~~g~iv~isS~~~~~------------  148 (257)
T 3imf_A           85 DILINNAAGNFICPAEDLSVNGWNSVINIVLNGTFYCSQAIGKYWIEK----GIKGNIINMVATYAWD------------  148 (257)
T ss_dssp             CEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----TCCCEEEEECCGGGGS------------
T ss_pred             CEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhh----CCCcEEEEECchhhcc------------
Confidence            99999999753  45678899999999999999999999999999665    2468999999988876            


Q ss_pred             CCCCCCcccccchhHHHHHHHHHHHHHHhc-cCCCcEEEEEeeCCcccCCcccC
Q 025509          159 DPSGYNGFRAYSQSKLANILHANELARRLK-EDGVDITANSVHPGAIATNIIRH  211 (251)
Q Consensus       159 ~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~-~~g~~i~v~~v~Pg~v~t~~~~~  211 (251)
                         +.++...|++||+|+++|+++++.|++ +.|  |+||+|+||+++|++...
T Consensus       149 ---~~~~~~~Y~asKaa~~~l~~~la~e~~~~~g--Irvn~v~PG~v~t~~~~~  197 (257)
T 3imf_A          149 ---AGPGVIHSAAAKAGVLAMTKTLAVEWGRKYG--IRVNAIAPGPIERTGGAD  197 (257)
T ss_dssp             ---CCTTCHHHHHHHHHHHHHHHHHHHHHHHHHC--CEEEEEEECCBSSCCCC-
T ss_pred             ---CCCCcHHHHHHHHHHHHHHHHHHHHhccccC--eEEEEEEECCCcCCcchh
Confidence               677888999999999999999999997 678  999999999999998654

>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A

Probab=100.00  E-value=3.9e-38  Score=262.99  Aligned_cols=185  Identities=23%  Similarity=0.316  Sum_probs=169.2

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      |++|||||++|||+++|++|+++|++|++++|+.+.+++..+++     +..+.++++|++++++++++++++.+++|++
T Consensus         9 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~i   83 (259)
T 4e6p_A            9 KSALITGSARGIGRAFAEAYVREGATVAIADIDIERARQAAAEI-----GPAAYAVQMDVTRQDSIDAAIAATVEHAGGL   83 (259)
T ss_dssp             CEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH-----CTTEEEEECCTTCHHHHHHHHHHHHHHSSSC
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-----CCCceEEEeeCCCHHHHHHHHHHHHHHcCCC
Confidence            58999999999999999999999999999999988888777766     5578999999999999999999999999999


Q ss_pred             eEEEEcCCCCC--CCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccccCC
Q 025509           81 NILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKIN  158 (251)
Q Consensus        81 d~lv~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~  158 (251)
                      |+||||||+..  ++.+.++++|++.+++|+.+++.++++++|+|.+++    ..|+||++||.++..            
T Consensus        84 d~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~----~~g~iv~isS~~~~~------------  147 (259)
T 4e6p_A           84 DILVNNAALFDLAPIVEITRESYEKLFAINVAGTLFTLQAAARQMIAQG----RGGKIINMASQAGRR------------  147 (259)
T ss_dssp             CEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT----SCEEEEEECCGGGTS------------
T ss_pred             CEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC----CCeEEEEECChhhcc------------
Confidence            99999999764  356788999999999999999999999999998862    268999999988876            


Q ss_pred             CCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccC
Q 025509          159 DPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  211 (251)
Q Consensus       159 ~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  211 (251)
                         +.++...|++||+|+++|+++++.|+++.|  |+||+|+||+++|++...
T Consensus       148 ---~~~~~~~Y~asK~a~~~~~~~la~e~~~~g--i~vn~v~PG~v~t~~~~~  195 (259)
T 4e6p_A          148 ---GEALVAIYCATKAAVISLTQSAGLDLIKHR--INVNAIAPGVVDGEHWDG  195 (259)
T ss_dssp             ---CCTTBHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECCBCSTTHHH
T ss_pred             ---CCCCChHHHHHHHHHHHHHHHHHHHhhhcC--CEEEEEEECCCccchhhh
Confidence               677888999999999999999999999999  999999999999998654

>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus}

Probab=100.00  E-value=1.2e-38  Score=268.05  Aligned_cols=187  Identities=24%  Similarity=0.216  Sum_probs=164.4

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      |++|||||++|||+++|++|+++|++|++++|+.+.+++..+++     +.++.++++|++|+++++++++++.+++|++
T Consensus        29 k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i  103 (272)
T 4dyv_A           29 KIAIVTGAGSGVGRAVAVALAGAGYGVALAGRRLDALQETAAEI-----GDDALCVPTDVTDPDSVRALFTATVEKFGRV  103 (272)
T ss_dssp             CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH-----TSCCEEEECCTTSHHHHHHHHHHHHHHHSCC
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh-----CCCeEEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence            57999999999999999999999999999999988888877766     4678999999999999999999999999999


Q ss_pred             eEEEEcCCCCC---CCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccccC
Q 025509           81 NILINNAGIMG---TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKI  157 (251)
Q Consensus        81 d~lv~~ag~~~---~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~  157 (251)
                      |+||||||+..   ++.+.+.++|++.+++|+.+++.++++++|+|+++..   +.|+||++||..+..           
T Consensus       104 D~lVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~---~~g~IV~isS~~~~~-----------  169 (272)
T 4dyv_A          104 DVLFNNAGTGAPAIPMEDLTFAQWKQVVDTNLTGPFLCTQEAFRVMKAQEP---RGGRIINNGSISATS-----------  169 (272)
T ss_dssp             CEEEECCCCCCCSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHSSS---CCEEEEEECCSSTTS-----------
T ss_pred             CEEEECCCCCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhCCC---CCcEEEEECchhhcC-----------
Confidence            99999999753   3567889999999999999999999999999987521   258999999988776           


Q ss_pred             CCCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCC
Q 025509          158 NDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRHN  212 (251)
Q Consensus       158 ~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~~  212 (251)
                          +.++...|++||+|+++|+++++.|++++|  |+||+|+||+|+|++.+..
T Consensus       170 ----~~~~~~~Y~asKaa~~~l~~~la~e~~~~g--I~vn~v~PG~v~T~~~~~~  218 (272)
T 4dyv_A          170 ----PRPYSAPYTATKHAITGLTKSTSLDGRVHD--IACGQIDIGNADTPMAQKM  218 (272)
T ss_dssp             ----CCTTCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEEEECC-------
T ss_pred             ----CCCCchHHHHHHHHHHHHHHHHHHHhCccC--EEEEEEEECcccChhhhhh
Confidence                677888999999999999999999999999  9999999999999997754

>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A

Probab=100.00  E-value=1.5e-38  Score=266.67  Aligned_cols=185  Identities=26%  Similarity=0.338  Sum_probs=163.0

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      |++|||||++|||+++|++|+++|++|++++|+.+++++..+++     +.++.++++|++|+++++++++++.++++++
T Consensus        28 k~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i  102 (266)
T 3grp_A           28 RKALVTGATGGIGEAIARCFHAQGAIVGLHGTREDKLKEIAADL-----GKDVFVFSANLSDRKSIKQLAEVAEREMEGI  102 (266)
T ss_dssp             CEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH-----CSSEEEEECCTTSHHHHHHHHHHHHHHHTSC
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-----CCceEEEEeecCCHHHHHHHHHHHHHHcCCC
Confidence            68999999999999999999999999999999988887776654     5679999999999999999999999999999


Q ss_pred             eEEEEcCCCCC--CCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccccCC
Q 025509           81 NILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKIN  158 (251)
Q Consensus        81 d~lv~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~  158 (251)
                      |+||||||+..  ++.+.+.++|++.+++|+.+++.++++++|+|+++     +.|+||++||..+..            
T Consensus       103 D~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~-----~~g~Iv~isS~~~~~------------  165 (266)
T 3grp_A          103 DILVNNAGITRDGLFVRMQDQDWDDVLAVNLTAASTLTRELIHSMMRR-----RYGRIINITSIVGVV------------  165 (266)
T ss_dssp             CEEEECCCCC-----CCCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----TCEEEEEECCC----------------
T ss_pred             CEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-----CCcEEEEECCHHHcC------------
Confidence            99999999764  35677889999999999999999999999999886     568999999988776            


Q ss_pred             CCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCC
Q 025509          159 DPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRHN  212 (251)
Q Consensus       159 ~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~~  212 (251)
                         +.++...|++||+|+++|+++++.|++++|  |+||+|+||+++|++....
T Consensus       166 ---~~~~~~~Y~asKaa~~~~~~~la~e~~~~g--I~vn~v~PG~v~t~~~~~~  214 (266)
T 3grp_A          166 ---GNPGQTNYCAAKAGLIGFSKALAQEIASRN--ITVNCIAPGFIKSAMTDKL  214 (266)
T ss_dssp             ------CHHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECSBCSHHHHTC
T ss_pred             ---CCCCchhHHHHHHHHHHHHHHHHHHhhhhC--cEEEEEeeCcCCCchhhcc
Confidence               667888999999999999999999999999  9999999999999997754

>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}

Probab=100.00  E-value=2.3e-38  Score=267.33  Aligned_cols=189  Identities=20%  Similarity=0.193  Sum_probs=172.0

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCC-CCceEEEEecCCCHHHHHHHHHHHHhcCCC
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIP-SAKVDAMELDLSSLASVRNFASEYNIQHHQ   79 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~-~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~   79 (251)
                      |++|||||++|||+++|++|+++|++|++++|+++.+++..+++.+... +..+.++++|++|+++++++++++.+++|+
T Consensus        12 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   91 (281)
T 3svt_A           12 RTYLVTGGGSGIGKGVAAGLVAAGASVMIVGRNPDKLAGAVQELEALGANGGAIRYEPTDITNEDETARAVDAVTAWHGR   91 (281)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTCCSSCEEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEeCCCCCHHHHHHHHHHHHHHcCC
Confidence            6899999999999999999999999999999999999988888876432 237899999999999999999999999999


Q ss_pred             eeEEEEcCCCC---CCCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCccccc
Q 025509           80 LNILINNAGIM---GTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDK  156 (251)
Q Consensus        80 id~lv~~ag~~---~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~  156 (251)
                      +|+||||||..   .++.+.+.++|++.+++|+.+++.++++++|+|.++     +.|+||++||.++..          
T Consensus        92 id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~-----~~g~iv~isS~~~~~----------  156 (281)
T 3svt_A           92 LHGVVHCAGGSENIGPITQVDSEAWRRTVDLNVNGTMYVLKHAAREMVRG-----GGGSFVGISSIAASN----------  156 (281)
T ss_dssp             CCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-----TCEEEEEECCHHHHS----------
T ss_pred             CCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-----CCcEEEEEeCHHHcC----------
Confidence            99999999973   245678899999999999999999999999999875     578999999988876          


Q ss_pred             CCCCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccC
Q 025509          157 INDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  211 (251)
Q Consensus       157 ~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  211 (251)
                           +.++...|++||+|+++|+++++.|++++|  |+||+|+||+++|++...
T Consensus       157 -----~~~~~~~Y~asK~a~~~l~~~la~e~~~~g--i~vn~v~PG~v~t~~~~~  204 (281)
T 3svt_A          157 -----THRWFGAYGVTKSAVDHLMQLAADELGASW--VRVNSIRPGLIRTDLVAA  204 (281)
T ss_dssp             -----CCTTCTHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECSBCSGGGHH
T ss_pred             -----CCCCChhHHHHHHHHHHHHHHHHHHhhhcC--eEEEEEEeCcCcCcchhh
Confidence                 667788999999999999999999999999  999999999999999764

>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}

Probab=100.00  E-value=2.4e-38  Score=269.65  Aligned_cols=188  Identities=19%  Similarity=0.192  Sum_probs=169.5

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecC------------chhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHH
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRD------------IAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRN   68 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~------------~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~   68 (251)
                      |++|||||++|||+++|++|+++|++|++++|+            .+.+++..+++.+.  +.++.++++|++|.+++++
T Consensus        29 k~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~v~~  106 (299)
T 3t7c_A           29 KVAFITGAARGQGRSHAITLAREGADIIAIDVCKQLDGVKLPMSTPDDLAETVRQVEAL--GRRIIASQVDVRDFDAMQA  106 (299)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCCSCCCCHHHHHHHHHHHHHT--TCCEEEEECCTTCHHHHHH
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCEEEEEecccccccccccccCHHHHHHHHHHHHhc--CCceEEEECCCCCHHHHHH
Confidence            689999999999999999999999999999987            56667776666554  5679999999999999999


Q ss_pred             HHHHHHhcCCCeeEEEEcCCCCCC---CCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCcccc
Q 025509           69 FASEYNIQHHQLNILINNAGIMGT---PFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHR  145 (251)
Q Consensus        69 ~~~~~~~~~g~id~lv~~ag~~~~---~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~  145 (251)
                      +++++.+++|++|+||||||+...   +.+.+.++|++.+++|+.+++.++++++|+|.++.    ..|+||++||.++.
T Consensus       107 ~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~----~~g~Iv~isS~~~~  182 (299)
T 3t7c_A          107 AVDDGVTQLGRLDIVLANAALASEGTRLNRMDPKTWRDMIDVNLNGAWITARVAIPHIMAGK----RGGSIVFTSSIGGL  182 (299)
T ss_dssp             HHHHHHHHHSCCCEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT----SCEEEEEECCGGGT
T ss_pred             HHHHHHHHhCCCCEEEECCCCCCCCCchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC----CCcEEEEECChhhc
Confidence            999999999999999999997532   56789999999999999999999999999998752    36899999998887


Q ss_pred             ccccCCcccccCCCCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccC
Q 025509          146 LAYHEGIRFDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  211 (251)
Q Consensus       146 ~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  211 (251)
                      .               +.++...|++||+|+++|+++|+.|+++.|  |+||+|+||+|+|++...
T Consensus       183 ~---------------~~~~~~~Y~asKaa~~~l~~~la~e~~~~g--I~vn~v~PG~v~T~~~~~  231 (299)
T 3t7c_A          183 R---------------GAENIGNYIASKHGLHGLMRTMALELGPRN--IRVNIVCPSSVATPMLLN  231 (299)
T ss_dssp             S---------------CCTTCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEESCBSSTTTSS
T ss_pred             c---------------CCCCcchHHHHHHHHHHHHHHHHHHhcccC--cEEEEEecCCccCccccc
Confidence            6               677888999999999999999999999999  999999999999999764

>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A

Probab=100.00  E-value=1.1e-38  Score=265.87  Aligned_cols=182  Identities=28%  Similarity=0.365  Sum_probs=166.9

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      |++|||||++|||+++|++|+++|++|++++|+++.+++..+++     +.++.++++|++|.++++++++++.+.+|++
T Consensus         9 k~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i   83 (255)
T 4eso_A            9 KKAIVIGGTHGMGLATVRRLVEGGAEVLLTGRNESNIARIREEF-----GPRVHALRSDIADLNEIAVLGAAAGQTLGAI   83 (255)
T ss_dssp             CEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH-----GGGEEEEECCTTCHHHHHHHHHHHHHHHSSE
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-----CCcceEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence            68999999999999999999999999999999988888777665     4579999999999999999999999999999


Q ss_pred             eEEEEcCCCCC--CCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccccCC
Q 025509           81 NILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKIN  158 (251)
Q Consensus        81 d~lv~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~  158 (251)
                      |+||||||+..  ++.+.++++|++.+++|+.+++.++++++|+|++       .|+||++||.++..            
T Consensus        84 d~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~-------~g~iv~isS~~~~~------------  144 (255)
T 4eso_A           84 DLLHINAGVSELEPFDQVSEASYDRQFAVNTKGAFFTVQRLTPLIRE-------GGSIVFTSSVADEG------------  144 (255)
T ss_dssp             EEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE-------EEEEEEECCGGGSS------------
T ss_pred             CEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhc-------CCEEEEECChhhcC------------
Confidence            99999999764  3567899999999999999999999999998854       47999999988776            


Q ss_pred             CCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccC
Q 025509          159 DPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  211 (251)
Q Consensus       159 ~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  211 (251)
                         +.+++..|++||+|+++|+++++.|++++|  |+||+|+||+++|++...
T Consensus       145 ---~~~~~~~Y~asKaa~~~~~~~la~e~~~~g--i~vn~v~PG~v~T~~~~~  192 (255)
T 4eso_A          145 ---GHPGMSVYSASKAALVSFASVLAAELLPRG--IRVNSVSPGFIDTPTKGV  192 (255)
T ss_dssp             ---BCTTBHHHHHHHHHHHHHHHHHHHHTGGGT--CEEEEEEECSBCCSSTTC
T ss_pred             ---CCCCchHHHHHHHHHHHHHHHHHHHHhhhC--cEEEEEecCcccCccccc
Confidence               677889999999999999999999999999  999999999999998764

>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}

Probab=100.00  E-value=2.1e-38  Score=267.81  Aligned_cols=189  Identities=26%  Similarity=0.297  Sum_probs=166.1

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEec-CchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCC
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVR-DIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQ   79 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r-~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~   79 (251)
                      |++|||||++|||+++|++|+++|++|++++| +.+.+++..+++.+.. +..+.++++|++|.++++++++++.+++|+
T Consensus        26 k~~lVTGas~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~  104 (281)
T 3v2h_A           26 KTAVITGSTSGIGLAIARTLAKAGANIVLNGFGAPDEIRTVTDEVAGLS-SGTVLHHPADMTKPSEIADMMAMVADRFGG  104 (281)
T ss_dssp             CEEEEETCSSHHHHHHHHHHHHTTCEEEEECCCCHHHHHHHHHHHHTTC-SSCEEEECCCTTCHHHHHHHHHHHHHHTSS
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHhhcc-CCcEEEEeCCCCCHHHHHHHHHHHHHHCCC
Confidence            68999999999999999999999999999999 5666777776665432 467999999999999999999999999999


Q ss_pred             eeEEEEcCCCCC--CCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccccC
Q 025509           80 LNILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKI  157 (251)
Q Consensus        80 id~lv~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~  157 (251)
                      +|+||||||+..  ++.+.+.++|++.+++|+.+++.++++++|+|+++     +.|+||++||.++..           
T Consensus       105 iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~-----~~g~iv~isS~~~~~-----------  168 (281)
T 3v2h_A          105 ADILVNNAGVQFVEKIEDFPVEQWDRIIAVNLSSSFHTIRGAIPPMKKK-----GWGRIINIASAHGLV-----------  168 (281)
T ss_dssp             CSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----TCEEEEEECCGGGTS-----------
T ss_pred             CCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-----CCCEEEEECCccccc-----------
Confidence            999999999753  35678899999999999999999999999999886     468999999988876           


Q ss_pred             CCCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCC
Q 025509          158 NDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRHN  212 (251)
Q Consensus       158 ~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~~  212 (251)
                          +.++...|++||+|+++|+++++.|+++.|  |+||+|+||+++|++....
T Consensus       169 ----~~~~~~~Y~asKaa~~~l~~~la~e~~~~g--I~vn~v~PG~v~t~~~~~~  217 (281)
T 3v2h_A          169 ----ASPFKSAYVAAKHGIMGLTKTVALEVAESG--VTVNSICPGYVLTPLVEKQ  217 (281)
T ss_dssp             ----CCTTCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECSBCC------
T ss_pred             ----CCCCchHHHHHHHHHHHHHHHHHHHhhhcC--cEEEEEECCCCcCcchhhh
Confidence                677888999999999999999999999999  9999999999999997643

>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*

Probab=100.00  E-value=3e-38  Score=261.93  Aligned_cols=187  Identities=27%  Similarity=0.376  Sum_probs=170.2

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      |++|||||++|||+++|++|+++|++|++++|+.+++++..+++.+.  +.++.++.+|++|+++++++++++.+++|++
T Consensus         8 k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~i   85 (247)
T 2jah_A            8 KVALITGASSGIGEATARALAAEGAAVAIAARRVEKLRALGDELTAA--GAKVHVLELDVADRQGVDAAVASTVEALGGL   85 (247)
T ss_dssp             CEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT--TCCEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc--CCcEEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence            58999999999999999999999999999999998888888777654  4578999999999999999999999999999


Q ss_pred             eEEEEcCCCCC--CCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccccCC
Q 025509           81 NILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKIN  158 (251)
Q Consensus        81 d~lv~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~  158 (251)
                      |+||||||+..  ++.+.+.++|++.+++|+.+++.++++++|+|+++     + |+||++||.++..            
T Consensus        86 d~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~-----~-g~iv~isS~~~~~------------  147 (247)
T 2jah_A           86 DILVNNAGIMLLGPVEDADTTDWTRMIDTNLLGLMYMTRAALPHLLRS-----K-GTVVQMSSIAGRV------------  147 (247)
T ss_dssp             SEEEECCCCCCCCCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----T-CEEEEECCGGGTC------------
T ss_pred             CEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHC-----C-CEEEEEccHHhcC------------
Confidence            99999999753  35678899999999999999999999999999875     3 8999999988776            


Q ss_pred             CCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCC
Q 025509          159 DPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRHN  212 (251)
Q Consensus       159 ~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~~  212 (251)
                         +.++...|++||+|+++|+++++.|++++|  |+||+|+||+++|++....
T Consensus       148 ---~~~~~~~Y~asK~a~~~~~~~la~e~~~~g--i~v~~v~PG~v~T~~~~~~  196 (247)
T 2jah_A          148 ---NVRNAAVYQATKFGVNAFSETLRQEVTERG--VRVVVIEPGTTDTELRGHI  196 (247)
T ss_dssp             ---CCTTCHHHHHHHHHHHHHHHHHHHHHGGGT--CEEEEEEECSBSSSGGGGC
T ss_pred             ---CCCCCcHHHHHHHHHHHHHHHHHHHhcccC--cEEEEEECCCCCCcchhcc
Confidence               667788999999999999999999999999  9999999999999997643

>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*

Probab=100.00  E-value=1.3e-38  Score=267.35  Aligned_cols=187  Identities=30%  Similarity=0.389  Sum_probs=169.8

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEec-CchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCC
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVR-DIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQ   79 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r-~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~   79 (251)
                      |++|||||++|||+++|++|+++|++|++++| +.+.+++..+++.+.  +..+.++++|++|.++++++++++.+++|+
T Consensus        29 k~vlVTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~d~~~v~~~~~~~~~~~g~  106 (269)
T 4dmm_A           29 RIALVTGASRGIGRAIALELAAAGAKVAVNYASSAGAADEVVAAIAAA--GGEAFAVKADVSQESEVEALFAAVIERWGR  106 (269)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT--TCCEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhc--CCcEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            68999999999999999999999999999988 666677777776654  567999999999999999999999999999


Q ss_pred             eeEEEEcCCCCC--CCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccccC
Q 025509           80 LNILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKI  157 (251)
Q Consensus        80 id~lv~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~  157 (251)
                      +|+||||||+..  ++.+.+.++|++.+++|+.+++.++++++|+|+++     +.|+||++||.++..           
T Consensus       107 id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~-----~~g~iv~isS~~~~~-----------  170 (269)
T 4dmm_A          107 LDVLVNNAGITRDTLLLRMKRDDWQSVLDLNLGGVFLCSRAAAKIMLKQ-----RSGRIINIASVVGEM-----------  170 (269)
T ss_dssp             CCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----TCCEEEEECCHHHHH-----------
T ss_pred             CCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-----CCcEEEEECchhhcC-----------
Confidence            999999999764  35678899999999999999999999999999886     578999999998877           


Q ss_pred             CCCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccC
Q 025509          158 NDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  211 (251)
Q Consensus       158 ~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  211 (251)
                          +.++...|++||+|+++|+++++.|++++|  |+||+|+||+++|++...
T Consensus       171 ----~~~~~~~Y~asK~a~~~l~~~la~e~~~~g--i~vn~v~PG~v~T~~~~~  218 (269)
T 4dmm_A          171 ----GNPGQANYSAAKAGVIGLTKTVAKELASRG--ITVNAVAPGFIATDMTSE  218 (269)
T ss_dssp             ----CCTTCHHHHHHHHHHHHHHHHHHHHHGGGT--CEEEEEEECCBTTSCSCH
T ss_pred             ----CCCCchhHHHHHHHHHHHHHHHHHHHhhhC--cEEEEEEECCCcCccccc
Confidence                677888999999999999999999999999  999999999999999764

>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}

Probab=100.00  E-value=2.4e-38  Score=268.94  Aligned_cols=189  Identities=26%  Similarity=0.333  Sum_probs=171.9

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      |++|||||++|||+++|++|+++|++|++++|+.+++++..+++.+.. ...+.++++|++|.++++++++++.+++|++
T Consensus        42 k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i  120 (293)
T 3rih_A           42 RSVLVTGGTKGIGRGIATVFARAGANVAVAARSPRELSSVTAELGELG-AGNVIGVRLDVSDPGSCADAARTVVDAFGAL  120 (293)
T ss_dssp             CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHTTSS-SSCEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhC-CCcEEEEEEeCCCHHHHHHHHHHHHHHcCCC
Confidence            689999999999999999999999999999999999988888876542 2579999999999999999999999999999


Q ss_pred             eEEEEcCCCCC--CCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCcccc-ccccCCcccccC
Q 025509           81 NILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHR-LAYHEGIRFDKI  157 (251)
Q Consensus        81 d~lv~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~-~~~~~~~~~~~~  157 (251)
                      |+||||||+..  ++.+.+.++|++.+++|+.+++.++++++|+|+++     +.|+||++||..+. .           
T Consensus       121 D~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~-----~~g~iV~isS~~~~~~-----------  184 (293)
T 3rih_A          121 DVVCANAGIFPEARLDTMTPEQLSEVLDVNVKGTVYTVQACLAPLTAS-----GRGRVILTSSITGPVT-----------  184 (293)
T ss_dssp             CEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHH-----SSCEEEEECCSBTTTB-----------
T ss_pred             CEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-----CCCEEEEEeChhhccC-----------
Confidence            99999999764  36678999999999999999999999999999886     46899999998775 3           


Q ss_pred             CCCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCC
Q 025509          158 NDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRHN  212 (251)
Q Consensus       158 ~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~~  212 (251)
                          +.+++..|++||+|+++|+++++.|+++.|  |+||+|+||+|.|++....
T Consensus       185 ----~~~~~~~Y~asKaa~~~l~~~la~e~~~~g--I~vn~v~PG~v~t~~~~~~  233 (293)
T 3rih_A          185 ----GYPGWSHYGASKAAQLGFMRTAAIELAPRG--VTVNAILPGNILTEGLVDM  233 (293)
T ss_dssp             ----BCTTCHHHHHHHHHHHHHHHHHHHHHGGGT--CEEEEEEECSBCCHHHHHT
T ss_pred             ----CCCCCHHHHHHHHHHHHHHHHHHHHHhhhC--eEEEEEecCCCcCcchhhc
Confidence                567788999999999999999999999999  9999999999999987643

>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}

Probab=100.00  E-value=5.1e-38  Score=264.76  Aligned_cols=191  Identities=25%  Similarity=0.298  Sum_probs=170.9

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      |++|||||++|||+++|++|+++|++|++++|+.+.+++..+++.+.  +.++.++++|++|+++++++++++.+++|++
T Consensus        33 k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dl~d~~~v~~~~~~~~~~~g~i  110 (276)
T 3r1i_A           33 KRALITGASTGIGKKVALAYAEAGAQVAVAARHSDALQVVADEIAGV--GGKALPIRCDVTQPDQVRGMLDQMTGELGGI  110 (276)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHT--TCCCEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCeEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence            68999999999999999999999999999999999999888888664  4678999999999999999999999999999


Q ss_pred             eEEEEcCCCCC--CCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccccCC
Q 025509           81 NILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKIN  158 (251)
Q Consensus        81 d~lv~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~  158 (251)
                      |+||||||+..  ++.+.+.++|++.+++|+.+++.++++++|+|++++    .+++||++||..+...           
T Consensus       111 D~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~----~~g~iv~isS~~~~~~-----------  175 (276)
T 3r1i_A          111 DIAVCNAGIVSVQAMLDMPLEEFQRIQDTNVTGVFLTAQAAARAMVDQG----LGGTIITTASMSGHII-----------  175 (276)
T ss_dssp             SEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT----SCEEEEEECCGGGTSC-----------
T ss_pred             CEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC----CCcEEEEECchHhccc-----------
Confidence            99999999764  356788999999999999999999999999998862    2589999999887651           


Q ss_pred             CCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCC
Q 025509          159 DPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRHN  212 (251)
Q Consensus       159 ~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~~  212 (251)
                        ...++...|++||+|+++|+++++.|++++|  |+||+|+||+|+|++.+..
T Consensus       176 --~~~~~~~~Y~asKaa~~~l~~~la~e~~~~g--Irvn~v~PG~v~T~~~~~~  225 (276)
T 3r1i_A          176 --NIPQQVSHYCTSKAAVVHLTKAMAVELAPHQ--IRVNSVSPGYIRTELVEPL  225 (276)
T ss_dssp             --CCSSCCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECCBCSTTTGGG
T ss_pred             --CCCCCcchHHHHHHHHHHHHHHHHHHHhhcC--cEEEEEeeCCCcCCccccc
Confidence              0123567899999999999999999999999  9999999999999998754

>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}

Probab=100.00  E-value=1.6e-38  Score=267.98  Aligned_cols=184  Identities=26%  Similarity=0.331  Sum_probs=169.4

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      |++|||||++|||+++|++|+++|++|++++|+.+.+++..+++     +..+.++++|++|+++++++++++.+++|++
T Consensus        30 k~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i  104 (277)
T 3gvc_A           30 KVAIVTGAGAGIGLAVARRLADEGCHVLCADIDGDAADAAATKI-----GCGAAACRVDVSDEQQIIAMVDACVAAFGGV  104 (277)
T ss_dssp             CEEEETTTTSTHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHH-----CSSCEEEECCTTCHHHHHHHHHHHHHHHSSC
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc-----CCcceEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence            68999999999999999999999999999999988888777666     5678999999999999999999999999999


Q ss_pred             eEEEEcCCCCC--CCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccccCC
Q 025509           81 NILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKIN  158 (251)
Q Consensus        81 d~lv~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~  158 (251)
                      |+||||||+..  ++.+.+.++|++.+++|+.+++.++++++|+|+++     +.|+||++||..+..            
T Consensus       105 D~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~-----~~g~Iv~isS~~~~~------------  167 (277)
T 3gvc_A          105 DKLVANAGVVHLASLIDTTVEDFDRVIAINLRGAWLCTKHAAPRMIER-----GGGAIVNLSSLAGQV------------  167 (277)
T ss_dssp             CEEEECCCCCCCBCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-----TCEEEEEECCGGGTS------------
T ss_pred             CEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-----CCcEEEEEcchhhcc------------
Confidence            99999999764  36678999999999999999999999999999886     578999999988876            


Q ss_pred             CCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccC
Q 025509          159 DPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  211 (251)
Q Consensus       159 ~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  211 (251)
                         +.++...|++||+|+++|+++++.|+++.|  |+||+|+||+++|++.+.
T Consensus       168 ---~~~~~~~Y~asKaa~~~l~~~la~e~~~~g--I~vn~v~PG~v~t~~~~~  215 (277)
T 3gvc_A          168 ---AVGGTGAYGMSKAGIIQLSRITAAELRSSG--IRSNTLLPAFVDTPMQQT  215 (277)
T ss_dssp             ---CCTTBHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECSBCCHHHHH
T ss_pred             ---CCCCchhHHHHHHHHHHHHHHHHHHhcccC--eEEEEEeeCCccCchHHH
Confidence               677888999999999999999999999999  999999999999998653

>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}

Probab=100.00  E-value=1.6e-38  Score=266.61  Aligned_cols=185  Identities=29%  Similarity=0.354  Sum_probs=161.5

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEe-cCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCC
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGV-RDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQ   79 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~-r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~   79 (251)
                      |++|||||++|||+++|++|+++|++|++++ |+.+.+++..+++.+.  +..+.++++|+++.++++++++++.+++|+
T Consensus        28 k~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~  105 (267)
T 3u5t_A           28 KVAIVTGASRGIGAAIAARLASDGFTVVINYAGKAAAAEEVAGKIEAA--GGKALTAQADVSDPAAVRRLFATAEEAFGG  105 (267)
T ss_dssp             CEEEEESCSSHHHHHHHHHHHHHTCEEEEEESSCSHHHHHHHHHHHHT--TCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhc--CCeEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            5799999999999999999999999999874 5666777777776554  567999999999999999999999999999


Q ss_pred             eeEEEEcCCCCC--CCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccccC
Q 025509           80 LNILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKI  157 (251)
Q Consensus        80 id~lv~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~  157 (251)
                      +|+||||||+..  ++.+.+.++|++.+++|+.+++.++++++|+|++       .|+||++||..+..           
T Consensus       106 iD~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~-------~g~iv~isS~~~~~-----------  167 (267)
T 3u5t_A          106 VDVLVNNAGIMPLTTIAETGDAVFDRVIAVNLKGTFNTLREAAQRLRV-------GGRIINMSTSQVGL-----------  167 (267)
T ss_dssp             EEEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHEEE-------EEEEEEECCTHHHH-----------
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhh-------CCeEEEEeChhhcc-----------
Confidence            999999999764  3567889999999999999999999999999854       47999999988776           


Q ss_pred             CCCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccC
Q 025509          158 NDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  211 (251)
Q Consensus       158 ~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  211 (251)
                          +.+++..|++||+|+++|+++|+.|+++.|  |+||+|+||+++|++...
T Consensus       168 ----~~~~~~~Y~asKaa~~~l~~~la~e~~~~g--I~vn~v~PG~v~T~~~~~  215 (267)
T 3u5t_A          168 ----LHPSYGIYAAAKAGVEAMTHVLSKELRGRD--ITVNAVAPGPTATDLFLE  215 (267)
T ss_dssp             ----CCTTCHHHHHHHHHHHHHHHHHHHHTTTSC--CEEEEEEECCBC------
T ss_pred             ----CCCCchHHHHHHHHHHHHHHHHHHHhhhhC--CEEEEEEECCCcCccccc
Confidence                677888999999999999999999999999  999999999999999764

>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti}

Probab=100.00  E-value=1.5e-38  Score=268.72  Aligned_cols=191  Identities=23%  Similarity=0.213  Sum_probs=167.7

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      |++|||||++|||+++|++|+++|++|++++|+.+.+++..+++.+.. +..+.++++|++|.++++++++++.+++|++
T Consensus        34 k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i  112 (281)
T 4dry_A           34 RIALVTGGGTGVGRGIAQALSAEGYSVVITGRRPDVLDAAAGEIGGRT-GNIVRAVVCDVGDPDQVAALFAAVRAEFARL  112 (281)
T ss_dssp             CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHH-SSCEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcC-CCeEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence            689999999999999999999999999999999999888888886653 3346899999999999999999999999999


Q ss_pred             eEEEEcCCCCC---CCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccccC
Q 025509           81 NILINNAGIMG---TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKI  157 (251)
Q Consensus        81 d~lv~~ag~~~---~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~  157 (251)
                      |+||||||+..   ++.+.+.++|++.+++|+.+++.++++++|+|+++..   ..|+||++||..+..           
T Consensus       113 D~lvnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~---~~g~IV~isS~~~~~-----------  178 (281)
T 4dry_A          113 DLLVNNAGSNVPPVPLEEVTFEQWNGIVAANLTGAFLCTQHAFRMMKAQTP---RGGRIINNGSISAQT-----------  178 (281)
T ss_dssp             SEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHSSS---CCEEEEEECCGGGTC-----------
T ss_pred             CEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCC---CCcEEEEECCHHhCC-----------
Confidence            99999999752   3567889999999999999999999999999987521   258999999988776           


Q ss_pred             CCCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCC
Q 025509          158 NDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRHN  212 (251)
Q Consensus       158 ~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~~  212 (251)
                          +.++...|++||+|+++|+++++.|+++.|  |+||+|+||+|+|++....
T Consensus       179 ----~~~~~~~Y~asKaa~~~l~~~la~e~~~~g--I~vn~v~PG~v~T~~~~~~  227 (281)
T 4dry_A          179 ----PRPNSAPYTATKHAITGLTKSTALDGRMHD--IACGQIDIGNAATDMTARM  227 (281)
T ss_dssp             ----CCTTCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEEECBCC------
T ss_pred             ----CCCCChhHHHHHHHHHHHHHHHHHHhcccC--eEEEEEEECcCcChhhhhh
Confidence                677888999999999999999999999999  9999999999999997754

>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2

Probab=100.00  E-value=9.4e-38  Score=258.60  Aligned_cols=188  Identities=30%  Similarity=0.399  Sum_probs=173.3

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      |++|||||++|||+++|++|+++|++|++++|++..+++..+++.+.  +.++.++.+|++++++++++++++.++++++
T Consensus         6 k~vlITGas~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   83 (247)
T 3lyl_A            6 KVALVTGASRGIGFEVAHALASKGATVVGTATSQASAEKFENSMKEK--GFKARGLVLNISDIESIQNFFAEIKAENLAI   83 (247)
T ss_dssp             CEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHT--TCCEEEEECCTTCHHHHHHHHHHHHHTTCCC
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCceEEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence            68999999999999999999999999999999999888888887665  5679999999999999999999999999999


Q ss_pred             eEEEEcCCCCCC--CCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccccCC
Q 025509           81 NILINNAGIMGT--PFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKIN  158 (251)
Q Consensus        81 d~lv~~ag~~~~--~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~  158 (251)
                      |+||||||+...  +.+.+.++|++.+++|+.+++.++++++|+|.++     +.++||++||..+..            
T Consensus        84 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-----~~g~iv~isS~~~~~------------  146 (247)
T 3lyl_A           84 DILVNNAGITRDNLMMRMSEDEWQSVINTNLSSIFRMSKECVRGMMKK-----RWGRIISIGSVVGSA------------  146 (247)
T ss_dssp             SEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----TCEEEEEECCTHHHH------------
T ss_pred             CEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-----CCeEEEEEcchhhcc------------
Confidence            999999997643  5577899999999999999999999999999886     468999999998876            


Q ss_pred             CCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCC
Q 025509          159 DPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRHN  212 (251)
Q Consensus       159 ~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~~  212 (251)
                         +.++...|++||+|+++|+++++.|+.++|  |+||+|+||++.|++.+..
T Consensus       147 ---~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g--i~v~~v~PG~v~t~~~~~~  195 (247)
T 3lyl_A          147 ---GNPGQTNYCAAKAGVIGFSKSLAYEVASRN--ITVNVVAPGFIATDMTDKL  195 (247)
T ss_dssp             ---CCTTCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECSBCCTTTTTS
T ss_pred             ---CCCCcHHHHHHHHHHHHHHHHHHHHHHHcC--eEEEEEeeCcEecccchhc
Confidence               677888999999999999999999999999  9999999999999998764

>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}

Probab=100.00  E-value=3.7e-38  Score=268.76  Aligned_cols=188  Identities=22%  Similarity=0.286  Sum_probs=172.8

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      |++|||||++|||+++|++|+++|++|++++|+.+++++..+++.+.  +..+.++++|++|.++++++++++.+.+|++
T Consensus        32 k~vlVTGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i  109 (301)
T 3tjr_A           32 RAAVVTGGASGIGLATATEFARRGARLVLSDVDQPALEQAVNGLRGQ--GFDAHGVVCDVRHLDEMVRLADEAFRLLGGV  109 (301)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT--TCCEEEEECCTTCHHHHHHHHHHHHHHHSSC
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc--CCceEEEEccCCCHHHHHHHHHHHHHhCCCC
Confidence            58999999999999999999999999999999999999988888765  5679999999999999999999999999999


Q ss_pred             eEEEEcCCCCC--CCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccccCC
Q 025509           81 NILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKIN  158 (251)
Q Consensus        81 d~lv~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~  158 (251)
                      |+||||||+..  ++.+.+.++|++.+++|+.|++.++++++|+|++++    ..|+||++||.++..            
T Consensus       110 d~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~----~~g~iv~isS~~~~~------------  173 (301)
T 3tjr_A          110 DVVFSNAGIVVAGPLAQMNHDDWRWVIDIDLWGSIHAVEAFLPRLLEQG----TGGHIAFTASFAGLV------------  173 (301)
T ss_dssp             SEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHC----SCEEEEEECCGGGTS------------
T ss_pred             CEEEECCCcCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcC----CCcEEEEeCchhhcC------------
Confidence            99999999764  356788999999999999999999999999998862    268999999998876            


Q ss_pred             CCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccC
Q 025509          159 DPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  211 (251)
Q Consensus       159 ~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  211 (251)
                         +.++...|++||+|+++|+++|+.|+.+.|  |+|++|+||+|+|++...
T Consensus       174 ---~~~~~~~Y~asKaa~~~~~~~la~e~~~~g--i~v~~v~PG~v~T~~~~~  221 (301)
T 3tjr_A          174 ---PNAGLGTYGVAKYGVVGLAETLAREVKPNG--IGVSVLCPMVVETKLVSN  221 (301)
T ss_dssp             ---CCTTBHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEECCSCCCSSHHHH
T ss_pred             ---CCCCchHHHHHHHHHHHHHHHHHHHhcccC--cEEEEEECCccccccccc
Confidence               677889999999999999999999999999  999999999999999764

>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2

Probab=100.00  E-value=3.8e-38  Score=264.10  Aligned_cols=189  Identities=25%  Similarity=0.341  Sum_probs=171.8

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      |++|||||++|||+++|++|+++|++|++++|+++++++..+++.+..++.++.++.+|+++.++++++++++.+++|++
T Consensus        14 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~i   93 (267)
T 1iy8_A           14 RVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTATTERFGRI   93 (267)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTSHHHHHHHHHHHHHHHSCC
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            68999999999999999999999999999999998888888888766556679999999999999999999999999999


Q ss_pred             eEEEEcCCCCC---CCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccccC
Q 025509           81 NILINNAGIMG---TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKI  157 (251)
Q Consensus        81 d~lv~~ag~~~---~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~  157 (251)
                      |+||||||+..   ++.+.+.++|++.+++|+.+++.++++++|+|+++     +.++||++||..+..           
T Consensus        94 d~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~-----~~g~iv~isS~~~~~-----------  157 (267)
T 1iy8_A           94 DGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQ-----GSGMVVNTASVGGIR-----------  157 (267)
T ss_dssp             SEEEECCCCCCCCBCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----TCCEEEEECCGGGTS-----------
T ss_pred             CEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc-----CCCEEEEEcchhhcc-----------
Confidence            99999999753   35577889999999999999999999999999876     468999999988765           


Q ss_pred             CCCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccC
Q 025509          158 NDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  211 (251)
Q Consensus       158 ~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  211 (251)
                          +.++...|++||+++++|+++++.|+++.|  |+||+|+||+++|++...
T Consensus       158 ----~~~~~~~Y~asK~a~~~~~~~la~e~~~~g--i~v~~v~PG~v~t~~~~~  205 (267)
T 1iy8_A          158 ----GIGNQSGYAAAKHGVVGLTRNSAVEYGRYG--IRINAIAPGAIWTPMVEN  205 (267)
T ss_dssp             ----BCSSBHHHHHHHHHHHHHHHHHHHHHGGGT--CEEEEEEECSBCSHHHHH
T ss_pred             ----CCCCCccHHHHHHHHHHHHHHHHHHHHhcC--eEEEEEEeCCCcCcchhc
Confidence                567788999999999999999999999999  999999999999998653

>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A*

Probab=100.00  E-value=2.1e-38  Score=267.23  Aligned_cols=186  Identities=20%  Similarity=0.218  Sum_probs=170.3

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      |++|||||++|||+++|++|+++|++|++++|+.+++++..+++.+.. +.++.++++|+++.++++++++++.+++|++
T Consensus        28 k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i  106 (277)
T 4fc7_A           28 KVAFITGGGSGIGFRIAEIFMRHGCHTVIASRSLPRVLTAARKLAGAT-GRRCLPLSMDVRAPPAVMAAVDQALKEFGRI  106 (277)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHH-SSCEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhc-CCcEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence            689999999999999999999999999999999988888888776543 4679999999999999999999999999999


Q ss_pred             eEEEEcCCCCC--CCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccccCC
Q 025509           81 NILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKIN  158 (251)
Q Consensus        81 d~lv~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~  158 (251)
                      |+||||||+..  ++.+.+.++|++++++|+.+++.++++++|+|.++     +.|+||++||..+..            
T Consensus       107 d~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-----~~g~iv~isS~~~~~------------  169 (277)
T 4fc7_A          107 DILINCAAGNFLCPAGALSFNAFKTVMDIDTSGTFNVSRVLYEKFFRD-----HGGVIVNITATLGNR------------  169 (277)
T ss_dssp             CEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHH-----HCEEEEEECCSHHHH------------
T ss_pred             CEEEECCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc-----CCCEEEEECchhhCC------------
Confidence            99999999653  35678999999999999999999999999998876     468999999998877            


Q ss_pred             CCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcc
Q 025509          159 DPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNII  209 (251)
Q Consensus       159 ~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~  209 (251)
                         +.++...|++||+|+++|+++++.|++++|  |+||+|+||+|.|++.
T Consensus       170 ---~~~~~~~Y~asKaa~~~l~~~la~e~~~~g--i~vn~v~PG~v~t~~~  215 (277)
T 4fc7_A          170 ---GQALQVHAGSAKAAVDAMTRHLAVEWGPQN--IRVNSLAPGPISGTEG  215 (277)
T ss_dssp             ---TCTTCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECCBSSSHH
T ss_pred             ---CCCCcHHHHHHHHHHHHHHHHHHHHhhhcC--eEEEEEEECCEecchh
Confidence               677888999999999999999999999999  9999999999999864

>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus}

Probab=100.00  E-value=1e-37  Score=261.49  Aligned_cols=183  Identities=22%  Similarity=0.297  Sum_probs=165.1

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      |++|||||++|||+++|++|+++|++|++++|+.+++++.        ....+.++++|++|.++++++++++.+.+|++
T Consensus        17 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~--------~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i   88 (266)
T 3p19_A           17 KLVVITGASSGIGEAIARRFSEEGHPLLLLARRVERLKAL--------NLPNTLCAQVDVTDKYTFDTAITRAEKIYGPA   88 (266)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTCCEEEEESCHHHHHTT--------CCTTEEEEECCTTCHHHHHHHHHHHHHHHCSE
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHh--------hcCCceEEEecCCCHHHHHHHHHHHHHHCCCC
Confidence            5799999999999999999999999999999987654432        13468899999999999999999999999999


Q ss_pred             eEEEEcCCCCC--CCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccccCC
Q 025509           81 NILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKIN  158 (251)
Q Consensus        81 d~lv~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~  158 (251)
                      |+||||||+..  ++.+.+.++|++.+++|+.|++.++++++|+|+++     +.|+||++||.++..            
T Consensus        89 D~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~-----~~g~IV~isS~~~~~------------  151 (266)
T 3p19_A           89 DAIVNNAGMMLLGQIDTQEANEWQRMFDVNVLGLLNGMQAVLAPMKAR-----NCGTIINISSIAGKK------------  151 (266)
T ss_dssp             EEEEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----TCCEEEEECCGGGTS------------
T ss_pred             CEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-----CCcEEEEEcChhhCC------------
Confidence            99999999753  46678899999999999999999999999999886     568999999988876            


Q ss_pred             CCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCCc
Q 025509          159 DPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRHNS  213 (251)
Q Consensus       159 ~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~~~  213 (251)
                         +.++...|++||+|+++|+++++.|+++.|  |+||+|+||+|+|++.....
T Consensus       152 ---~~~~~~~Y~asK~a~~~~~~~la~e~~~~g--i~vn~v~PG~v~T~~~~~~~  201 (266)
T 3p19_A          152 ---TFPDHAAYCGTKFAVHAISENVREEVAASN--VRVMTIAPSAVKTELLSHTT  201 (266)
T ss_dssp             ---CCTTCHHHHHHHHHHHHHHHHHHHHHGGGT--CEEEEEEECSBSSSGGGGCS
T ss_pred             ---CCCCCchHHHHHHHHHHHHHHHHHHhcccC--cEEEEEeeCccccchhhccc
Confidence               677888999999999999999999999999  99999999999999987543

>3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A*

Probab=100.00  E-value=3.8e-38  Score=261.58  Aligned_cols=183  Identities=23%  Similarity=0.362  Sum_probs=162.4

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      |++|||||++|||+++|++|+++|++|++++|+.+++++..+++     +..+.++.+|++++++++++++++.+++|++
T Consensus         1 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i   75 (248)
T 3asu_A            1 MIVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDEL-----GDNLYIAQLDVRNRAAIEEMLASLPAEWCNI   75 (248)
T ss_dssp             CEEEETTTTSTTHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH-----CTTEEEEECCTTCHHHHHHHHHTSCTTTCCC
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-----cCceEEEEcCCCCHHHHHHHHHHHHHhCCCC
Confidence            78999999999999999999999999999999988777766655     3568999999999999999999998899999


Q ss_pred             eEEEEcCCCCC---CCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccccC
Q 025509           81 NILINNAGIMG---TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKI  157 (251)
Q Consensus        81 d~lv~~ag~~~---~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~  157 (251)
                      |+||||||+..   ++.+.+.++|++.+++|+.+++.++++++|+|+++     +.|+||++||.++..           
T Consensus        76 D~lvnnAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~-----~~g~iv~isS~~~~~-----------  139 (248)
T 3asu_A           76 DILVNNAGLALGMEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVER-----NHGHIINIGSTAGSW-----------  139 (248)
T ss_dssp             CEEEECCCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----TCCEEEEECCGGGTS-----------
T ss_pred             CEEEECCCcCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-----CCceEEEEccchhcc-----------
Confidence            99999999752   35678889999999999999999999999999876     468999999988765           


Q ss_pred             CCCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccc-CCccc
Q 025509          158 NDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIA-TNIIR  210 (251)
Q Consensus       158 ~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~-t~~~~  210 (251)
                          +.++...|++||+++++|+++++.|+++.|  |+||+|+||+++ |++..
T Consensus       140 ----~~~~~~~Y~asKaa~~~~~~~la~e~~~~g--i~v~~v~PG~v~gT~~~~  187 (248)
T 3asu_A          140 ----PYAGGNVYGATKAFVRQFSLNLRTDLHGTA--VRVTDIEPGLVGGTEFSN  187 (248)
T ss_dssp             ----CCTTCHHHHHHHHHHHHHHHHHHHHTTTSC--CEEEEEEECSBCC-----
T ss_pred             ----CCCCCchHHHHHHHHHHHHHHHHHHhhhcC--cEEEEEeccccccCcchh
Confidence                667788999999999999999999999999  999999999999 99864

>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis}

Probab=100.00  E-value=1.8e-37  Score=257.03  Aligned_cols=187  Identities=28%  Similarity=0.361  Sum_probs=169.1

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEec-CchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCC
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVR-DIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQ   79 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r-~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~   79 (251)
                      |++|||||++|||+++|++|+++|++|++++| +++++++..+++.+.  +.++.++++|++|+++++++++++.+++|+
T Consensus         5 k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   82 (246)
T 2uvd_A            5 KVALVTGASRGIGRAIAIDLAKQGANVVVNYAGNEQKANEVVDEIKKL--GSDAIAVRADVANAEDVTNMVKQTVDVFGQ   82 (246)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT--TCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhc--CCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            68999999999999999999999999999999 777777777777554  457889999999999999999999999999


Q ss_pred             eeEEEEcCCCCC--CCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccccC
Q 025509           80 LNILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKI  157 (251)
Q Consensus        80 id~lv~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~  157 (251)
                      +|+||||||+..  ++.+.+.++|++.+++|+.+++.++++++|+|+++     +.++||++||.++..           
T Consensus        83 id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~-----~~g~iv~isS~~~~~-----------  146 (246)
T 2uvd_A           83 VDILVNNAGVTKDNLLMRMKEEEWDTVINTNLKGVFLCTKAVSRFMMRQ-----RHGRIVNIASVVGVT-----------  146 (246)
T ss_dssp             CCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----TCEEEEEECCTHHHH-----------
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-----CCcEEEEECCHHhcC-----------
Confidence            999999999764  35577889999999999999999999999999876     468999999988776           


Q ss_pred             CCCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccC
Q 025509          158 NDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  211 (251)
Q Consensus       158 ~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  211 (251)
                          +.++...|++||+++++|+++++.|+.+.|  |+||+|+||+++|++...
T Consensus       147 ----~~~~~~~Y~asK~a~~~~~~~la~e~~~~g--i~v~~v~Pg~v~t~~~~~  194 (246)
T 2uvd_A          147 ----GNPGQANYVAAKAGVIGLTKTSAKELASRN--ITVNAIAPGFIATDMTDV  194 (246)
T ss_dssp             ----CCTTBHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECSBGGGCSSC
T ss_pred             ----CCCCCchHHHHHHHHHHHHHHHHHHhhhcC--eEEEEEEeccccCcchhh
Confidence                567788999999999999999999999999  999999999999998765

>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}

Probab=100.00  E-value=5.5e-38  Score=265.07  Aligned_cols=191  Identities=26%  Similarity=0.311  Sum_probs=159.9

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEec-CchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCC
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVR-DIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQ   79 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r-~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~   79 (251)
                      |++|||||++|||+++|++|+++|++|++++| +.+.+++..+++.+.  +.++.++++|++|+++++++++++.+++|+
T Consensus        30 k~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~  107 (280)
T 4da9_A           30 PVAIVTGGRRGIGLGIARALAASGFDIAITGIGDAEGVAPVIAELSGL--GARVIFLRADLADLSSHQATVDAVVAEFGR  107 (280)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCHHHHHHHHHHHHHT--TCCEEEEECCTTSGGGHHHHHHHHHHHHSC
T ss_pred             CEEEEecCCCHHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHHhc--CCcEEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence            57999999999999999999999999999995 777777777777654  567999999999999999999999999999


Q ss_pred             eeEEEEcCCCC----CCCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccc
Q 025509           80 LNILINNAGIM----GTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFD  155 (251)
Q Consensus        80 id~lv~~ag~~----~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~  155 (251)
                      +|+||||||+.    .++.+.+.++|++.+++|+.+++.++++++|+|+++..  +..|+||++||.++..         
T Consensus       108 iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~--~~~g~Iv~isS~~~~~---------  176 (280)
T 4da9_A          108 IDCLVNNAGIASIVRDDFLDLKPENFDTIVGVNLRGTVFFTQAVLKAMLASDA--RASRSIINITSVSAVM---------  176 (280)
T ss_dssp             CCEEEEECC------CCGGGCCHHHHHHHTTTHHHHHHHHHHHHHHHHHHHCC--CCCEEEEEECCC-------------
T ss_pred             CCEEEECCCccccCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHhCC--CCCCEEEEEcchhhcc---------
Confidence            99999999973    24567899999999999999999999999999988621  1268999999988876         


Q ss_pred             cCCCCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCC
Q 025509          156 KINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRHN  212 (251)
Q Consensus       156 ~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~~  212 (251)
                            +.++...|++||+|+++|+++++.|+++.|  |+||+|+||+++|++....
T Consensus       177 ------~~~~~~~Y~asKaa~~~l~~~la~e~~~~g--I~vn~v~PG~v~T~~~~~~  225 (280)
T 4da9_A          177 ------TSPERLDYCMSKAGLAAFSQGLALRLAETG--IAVFEVRPGIIRSDMTAAV  225 (280)
T ss_dssp             ---------CCHHHHHHHHHHHHHHHHHHHHHTTTT--EEEEEEEECCBCC------
T ss_pred             ------CCCCccHHHHHHHHHHHHHHHHHHHHHHhC--cEEEEEeecCCcCCchhhc
Confidence                  677888999999999999999999999999  9999999999999997754

>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2

Probab=100.00  E-value=3.7e-37  Score=258.97  Aligned_cols=187  Identities=25%  Similarity=0.286  Sum_probs=165.4

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcC-CC
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQH-HQ   79 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~-g~   79 (251)
                      |++|||||++|||+++|++|+++|++|++++|+++++++..+++.+.  +..+.++.+|++++++++++++++.+.+ ++
T Consensus        22 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~   99 (273)
T 1ae1_A           22 TTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREK--GLNVEGSVCDLLSRTERDKLMQTVAHVFDGK   99 (273)
T ss_dssp             CEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT--TCCEEEEECCTTCHHHHHHHHHHHHHHTTSC
T ss_pred             CEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCceEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence            57999999999999999999999999999999988888877777654  4578999999999999999999999998 89


Q ss_pred             eeEEEEcCCCCC--CCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccccC
Q 025509           80 LNILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKI  157 (251)
Q Consensus        80 id~lv~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~  157 (251)
                      +|+||||||+..  ++.+.+.++|++.+++|+.+++.++++++|+|+++     +.|+||++||.++..           
T Consensus       100 id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~-----~~g~iv~isS~~~~~-----------  163 (273)
T 1ae1_A          100 LNILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAYHLSQIAYPLLKAS-----QNGNVIFLSSIAGFS-----------  163 (273)
T ss_dssp             CCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----TSEEEEEECCGGGTS-----------
T ss_pred             CcEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-----CCcEEEEEcCHhhcC-----------
Confidence            999999999753  45678899999999999999999999999999876     468999999988776           


Q ss_pred             CCCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccC
Q 025509          158 NDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  211 (251)
Q Consensus       158 ~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  211 (251)
                          +.++...|++||+|+++|+++++.|+++.|  |+||+|+||+++|++...
T Consensus       164 ----~~~~~~~Y~asK~a~~~~~~~la~e~~~~g--i~v~~v~Pg~v~t~~~~~  211 (273)
T 1ae1_A          164 ----ALPSVSLYSASKGAINQMTKSLACEWAKDN--IRVNSVAPGVILTPLVET  211 (273)
T ss_dssp             ----CCTTCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECSBC------
T ss_pred             ----CCCCcchhHHHHHHHHHHHHHHHHHHhhcC--cEEEEEEeCCCcCchhhh
Confidence                567788999999999999999999999999  999999999999998764

>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}

Probab=100.00  E-value=8.9e-38  Score=263.26  Aligned_cols=190  Identities=22%  Similarity=0.202  Sum_probs=165.7

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecC------------chhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHH
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRD------------IAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRN   68 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~------------~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~   68 (251)
                      |++|||||++|||+++|++|+++|++|++++|+            .+.+++..+.+.+.  +.++.++++|++|++++++
T Consensus        14 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~v~~   91 (278)
T 3sx2_A           14 KVAFITGAARGQGRAHAVRLAADGADIIAVDLCDQIASVPYPLATPEELAATVKLVEDI--GSRIVARQADVRDRESLSA   91 (278)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHH--TCCEEEEECCTTCHHHHHH
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCeEEEEecccccccccccccchHHHHHHHHHHHhc--CCeEEEEeCCCCCHHHHHH
Confidence            689999999999999999999999999999987            56666666666554  5679999999999999999


Q ss_pred             HHHHHHhcCCCeeEEEEcCCCCCCCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccc
Q 025509           69 FASEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAY  148 (251)
Q Consensus        69 ~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~  148 (251)
                      +++++.+++|++|+||||||+....  .+.++|++.+++|+.+++.++++++|+|++++    ..|+||++||.++..+.
T Consensus        92 ~~~~~~~~~g~id~lv~nAg~~~~~--~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~----~~g~iv~isS~~~~~~~  165 (278)
T 3sx2_A           92 ALQAGLDELGRLDIVVANAGIAPMS--AGDDGWHDVIDVNLTGVYHTIKVAIPTLVKQG----TGGSIVLISSSAGLAGV  165 (278)
T ss_dssp             HHHHHHHHHCCCCEEEECCCCCCCS--STHHHHHHHHHHHTHHHHHHHHHHHHHHHHHC----SCEEEEEECCGGGTSCC
T ss_pred             HHHHHHHHcCCCCEEEECCCCCCCC--CCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC----CCcEEEEEccHHhcCCC
Confidence            9999999999999999999976432  25789999999999999999999999998862    36899999998876521


Q ss_pred             cCCcccccCCCCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccC
Q 025509          149 HEGIRFDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  211 (251)
Q Consensus       149 ~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  211 (251)
                                 ..+.++...|++||+|+++|+++++.|+++.|  |+||+|+||+|+|++...
T Consensus       166 -----------~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~g--i~vn~v~PG~v~T~~~~~  215 (278)
T 3sx2_A          166 -----------GSADPGSVGYVAAKHGVVGLMRVYANLLAGQM--IRVNSIHPSGVETPMINN  215 (278)
T ss_dssp             -----------CCSSHHHHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEESCBSSTTTSS
T ss_pred             -----------ccCCCCchHhHHHHHHHHHHHHHHHHHHhccC--cEEEEEecCCccCccchh
Confidence                       01226678899999999999999999999999  999999999999999875

>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A

Probab=100.00  E-value=9.4e-38  Score=259.71  Aligned_cols=186  Identities=25%  Similarity=0.318  Sum_probs=169.1

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecC--CCHHHHHHHHHHHHhcCC
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDL--SSLASVRNFASEYNIQHH   78 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~--~~~~~i~~~~~~~~~~~g   78 (251)
                      |++|||||++|||+++|++|+++|++|++++|+.+++++..+++.+.. +..+.++.+|+  ++.++++++++++.+++|
T Consensus        13 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~g   91 (252)
T 3f1l_A           13 RIILVTGASDGIGREAAMTYARYGATVILLGRNEEKLRQVASHINEET-GRQPQWFILDLLTCTSENCQQLAQRIAVNYP   91 (252)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHH-SCCCEEEECCTTTCCHHHHHHHHHHHHHHCS
T ss_pred             CEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhc-CCCceEEEEecccCCHHHHHHHHHHHHHhCC
Confidence            689999999999999999999999999999999999988888886653 34688999999  999999999999999999


Q ss_pred             CeeEEEEcCCCC---CCCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccc
Q 025509           79 QLNILINNAGIM---GTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFD  155 (251)
Q Consensus        79 ~id~lv~~ag~~---~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~  155 (251)
                      ++|+||||||+.   .++.+.++++|++.+++|+.+++.++++++|+|+++     +.|+||++||..+..         
T Consensus        92 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~-----~~g~iv~isS~~~~~---------  157 (252)
T 3f1l_A           92 RLDGVLHNAGLLGDVCPMSEQNPQVWQDVMQVNVNATFMLTQALLPLLLKS-----DAGSLVFTSSSVGRQ---------  157 (252)
T ss_dssp             CCSEEEECCCCCCCCSCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTS-----SSCEEEEECCGGGTS---------
T ss_pred             CCCEEEECCccCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHC-----CCCEEEEECChhhcc---------
Confidence            999999999974   246678899999999999999999999999999875     568999999988876         


Q ss_pred             cCCCCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCccc
Q 025509          156 KINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIR  210 (251)
Q Consensus       156 ~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~  210 (251)
                            +.++...|++||+|+++|+++|+.|+++.   |+||+|+||+++|++..
T Consensus       158 ------~~~~~~~Y~asK~a~~~l~~~la~e~~~~---irvn~v~PG~v~t~~~~  203 (252)
T 3f1l_A          158 ------GRANWGAYAASKFATEGMMQVLADEYQQR---LRVNCINPGGTRTAMRA  203 (252)
T ss_dssp             ------CCTTCHHHHHHHHHHHHHHHHHHHHTTTT---CEEEEEECCSBSSHHHH
T ss_pred             ------CCCCCchhHHHHHHHHHHHHHHHHHhcCC---cEEEEEecCcccCchhh
Confidence                  67788899999999999999999999764   99999999999999864

>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*

Probab=100.00  E-value=1.9e-37  Score=258.82  Aligned_cols=186  Identities=27%  Similarity=0.286  Sum_probs=168.8

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcC-CC
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQH-HQ   79 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~-g~   79 (251)
                      |++|||||++|||+++|++|+++|++|++++|+++.+++..+++.+.  +.++.++++|++++++++++++++.+++ ++
T Consensus        10 k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~   87 (260)
T 2ae2_A           10 CTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSK--GFKVEASVCDLSSRSERQELMNTVANHFHGK   87 (260)
T ss_dssp             CEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT--TCEEEEEECCTTCHHHHHHHHHHHHHHTTTC
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCcEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence            68999999999999999999999999999999988888877777654  4578999999999999999999999998 89


Q ss_pred             eeEEEEcCCCCC--CCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccccC
Q 025509           80 LNILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKI  157 (251)
Q Consensus        80 id~lv~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~  157 (251)
                      +|+||||||+..  +..+.+.++|++.+++|+.+++.++++++|+|+++     +.++||++||..+..           
T Consensus        88 id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~-----~~g~iv~isS~~~~~-----------  151 (260)
T 2ae2_A           88 LNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKAS-----ERGNVVFISSVSGAL-----------  151 (260)
T ss_dssp             CCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT-----SSEEEEEECCGGGTS-----------
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-----CCcEEEEEcchhhcc-----------
Confidence            999999999753  35577889999999999999999999999999875     468999999988765           


Q ss_pred             CCCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCccc
Q 025509          158 NDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIR  210 (251)
Q Consensus       158 ~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~  210 (251)
                          +.++...|++||+++++|+++++.|+++.|  |+||+|+||+++|++..
T Consensus       152 ----~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g--i~v~~v~Pg~v~t~~~~  198 (260)
T 2ae2_A          152 ----AVPYEAVYGATKGAMDQLTRCLAFEWAKDN--IRVNGVGPGVIATSLVE  198 (260)
T ss_dssp             ----CCTTCHHHHHHHHHHHHHHHHHHHHTGGGT--EEEEEEEECSBCSHHHH
T ss_pred             ----CCCCcchHHHHHHHHHHHHHHHHHHHhhcC--cEEEEEecCCCCCcchh
Confidence                567778999999999999999999999999  99999999999999865

>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV}

Probab=100.00  E-value=5.1e-38  Score=264.44  Aligned_cols=187  Identities=21%  Similarity=0.268  Sum_probs=163.2

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchh-------HHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHH
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAA-------GKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEY   73 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~-------~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~   73 (251)
                      |++|||||++|||+++|++|+++|++|++++|+..+       +++..+++.+.  +.++.++++|++|.++++++++++
T Consensus         7 k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~v~~~~~~~   84 (274)
T 3e03_A            7 KTLFITGASRGIGLAIALRAARDGANVAIAAKSAVANPKLPGTIHSAAAAVNAA--GGQGLALKCDIREEDQVRAAVAAT   84 (274)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCSCCTTSCCCHHHHHHHHHHH--TSEEEEEECCTTCHHHHHHHHHHH
T ss_pred             cEEEEECCCChHHHHHHHHHHHCCCEEEEEeccchhhhhhHHHHHHHHHHHHhc--CCeEEEEeCCCCCHHHHHHHHHHH
Confidence            689999999999999999999999999999998754       55666666554  568999999999999999999999


Q ss_pred             HhcCCCeeEEEEcCCCCC--CCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCC
Q 025509           74 NIQHHQLNILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEG  151 (251)
Q Consensus        74 ~~~~g~id~lv~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~  151 (251)
                      .+++|++|+||||||+..  ++.+.+.++|++++++|+.+++.++++++|+|+++     +.|+||++||..+..     
T Consensus        85 ~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~-----~~g~iv~isS~~~~~-----  154 (274)
T 3e03_A           85 VDTFGGIDILVNNASAIWLRGTLDTPMKRFDLMQQVNARGSFVCAQACLPHLLQA-----PNPHILTLAPPPSLN-----  154 (274)
T ss_dssp             HHHHSCCCEEEECCCCCCCCCGGGSCHHHHHHHHHHTHHHHHHHHHHHHHHHTTS-----SSCEEEECCCCCCCC-----
T ss_pred             HHHcCCCCEEEECCCcccCCCcccCCHHHHHHHHhHhhHhHHHHHHHHHHHHHhc-----CCceEEEECChHhcC-----
Confidence            999999999999999764  35678899999999999999999999999999875     468999999987665     


Q ss_pred             cccccCCCCCC--CCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCC-cccCCcccC
Q 025509          152 IRFDKINDPSG--YNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPG-AIATNIIRH  211 (251)
Q Consensus       152 ~~~~~~~~~~~--~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg-~v~t~~~~~  211 (251)
                                +  .++...|++||+|+++|+++++.|++++|  |+||+|+|| .++|++...
T Consensus       155 ----------~~~~~~~~~Y~asKaal~~l~~~la~e~~~~g--I~vn~v~PG~~v~T~~~~~  205 (274)
T 3e03_A          155 ----------PAWWGAHTGYTLAKMGMSLVTLGLAAEFGPQG--VAINALWPRTVIATDAINM  205 (274)
T ss_dssp             ----------HHHHHHCHHHHHHHHHHHHHHHHHHHHHGGGT--CEEEEEECSBCBCC-----
T ss_pred             ----------CCCCCCCchHHHHHHHHHHHHHHHHHHhhhcC--EEEEEEECCcccccchhhh
Confidence                      3  45677899999999999999999999999  999999999 689998743

>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}

Probab=100.00  E-value=1.6e-37  Score=260.00  Aligned_cols=191  Identities=20%  Similarity=0.244  Sum_probs=167.8

Q ss_pred             CEEEEECCC-ChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCC
Q 025509            1 MDIVITGAT-SGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQ   79 (251)
Q Consensus         1 k~vlItG~s-~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~   79 (251)
                      |++|||||+ +|||+++|++|+++|++|++++|+.+++++..+++.+.. +.++.++++|+++.++++++++++.+++++
T Consensus        23 k~vlITGasg~GIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~  101 (266)
T 3o38_A           23 KVVLVTAAAGTGIGSTTARRALLEGADVVISDYHERRLGETRDQLADLG-LGRVEAVVCDVTSTEAVDALITQTVEKAGR  101 (266)
T ss_dssp             CEEEESSCSSSSHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTC-SSCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CEEEEECCCCCchHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhcC-CCceEEEEeCCCCHHHHHHHHHHHHHHhCC
Confidence            689999998 599999999999999999999999999988888886543 467999999999999999999999999999


Q ss_pred             eeEEEEcCCCCC--CCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccccC
Q 025509           80 LNILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKI  157 (251)
Q Consensus        80 id~lv~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~  157 (251)
                      +|+||||||+..  ++.+.+.++|++.+++|+.+++.++++++|+|+++    +..++||++||..+..           
T Consensus       102 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~----~~~~~iv~~sS~~~~~-----------  166 (266)
T 3o38_A          102 LDVLVNNAGLGGQTPVVDMTDEEWDRVLNVTLTSVMRATRAALRYFRGV----DHGGVIVNNASVLGWR-----------  166 (266)
T ss_dssp             CCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTS----SCCEEEEEECCGGGTC-----------
T ss_pred             CcEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc----CCCeEEEEeCCHHHcC-----------
Confidence            999999999754  35678899999999999999999999999999874    2468999999988776           


Q ss_pred             CCCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCCc
Q 025509          158 NDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRHNS  213 (251)
Q Consensus       158 ~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~~~  213 (251)
                          +.+++..|+++|+|+++|+++++.|+.+.|  |+||+|+||+++|++.+...
T Consensus       167 ----~~~~~~~Y~~sKaa~~~~~~~la~e~~~~g--i~v~~v~PG~v~t~~~~~~~  216 (266)
T 3o38_A          167 ----AQHSQSHYAAAKAGVMALTRCSAIEAVEFG--VRINAVSPSIARHKFLEKTS  216 (266)
T ss_dssp             ----CCTTCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECCCCC-------
T ss_pred             ----CCCCCchHHHHHHHHHHHHHHHHHHHHHcC--cEEEEEeCCcccchhhhccC
Confidence                677888999999999999999999999999  99999999999999977543

>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=100.00  E-value=2.3e-37  Score=257.57  Aligned_cols=188  Identities=27%  Similarity=0.332  Sum_probs=170.5

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEe-cCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCC
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGV-RDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQ   79 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~-r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~   79 (251)
                      |++|||||++|||+++|++|+++|++|++++ |+....++..+++.+.  +.++.++.+|+++.++++++++++.+++++
T Consensus        14 k~vlITGas~giG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   91 (256)
T 3ezl_A           14 RIAYVTGGMGGIGTSICQRLHKDGFRVVAGCGPNSPRRVKWLEDQKAL--GFDFYASEGNVGDWDSTKQAFDKVKAEVGE   91 (256)
T ss_dssp             EEEEETTTTSHHHHHHHHHHHHTTEEEEEEECTTCSSHHHHHHHHHHT--TCCCEEEECCTTCHHHHHHHHHHHHHHTCC
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhc--CCeeEEEecCCCCHHHHHHHHHHHHHhcCC
Confidence            5799999999999999999999999999888 7777777777766554  567899999999999999999999999999


Q ss_pred             eeEEEEcCCCCC--CCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccccC
Q 025509           80 LNILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKI  157 (251)
Q Consensus        80 id~lv~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~  157 (251)
                      +|+||||||+..  ++.+.+.++|++.+++|+.+++.++++++|+|+++     +.++||++||.++..           
T Consensus        92 id~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~-----~~g~iv~isS~~~~~-----------  155 (256)
T 3ezl_A           92 IDVLVNNAGITRDVVFRKMTREDWQAVIDTNLTSLFNVTKQVIDGMVER-----GWGRIINISSVNGQK-----------  155 (256)
T ss_dssp             EEEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----TCEEEEEECCCCGGG-----------
T ss_pred             CCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-----CCCEEEEEcchhhcc-----------
Confidence            999999999764  35678899999999999999999999999999886     468999999988876           


Q ss_pred             CCCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCC
Q 025509          158 NDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRHN  212 (251)
Q Consensus       158 ~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~~  212 (251)
                          +.++...|++||+|+++|+++++.|+.++|  |+||+|+||+++|++.+..
T Consensus       156 ----~~~~~~~Y~asK~a~~~~~~~la~e~~~~g--i~v~~v~PG~v~t~~~~~~  204 (256)
T 3ezl_A          156 ----GQFGQTNYSTAKAGIHGFTMSLAQEVATKG--VTVNTVSPGYIGTDMVKAI  204 (256)
T ss_dssp             ----SCSCCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECSBCCHHHHTS
T ss_pred             ----CCCCCcccHHHHHHHHHHHHHHHHHHHHhC--CEEEEEEECcccCcccccc
Confidence                677888999999999999999999999999  9999999999999998764

>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti}

Probab=100.00  E-value=4.3e-38  Score=262.38  Aligned_cols=190  Identities=25%  Similarity=0.264  Sum_probs=157.2

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      |++|||||++|||+++|++|+++|++|++++|+.+.+++..+++     +..+.++++|++|.++++++++++.+++|++
T Consensus         8 k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i   82 (257)
T 3tpc_A            8 RVFIVTGASSGLGAAVTRMLAQEGATVLGLDLKPPAGEEPAAEL-----GAAVRFRNADVTNEADATAALAFAKQEFGHV   82 (257)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSCC-----------------CEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHh-----CCceEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            68999999999999999999999999999999988877776655     4578999999999999999999999999999


Q ss_pred             eEEEEcCCCCCC--C----CcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhcc-CCCCceEEEEcCccccccccCCcc
Q 025509           81 NILINNAGIMGT--P----FMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARK-SGGEGRIINVSSEGHRLAYHEGIR  153 (251)
Q Consensus        81 d~lv~~ag~~~~--~----~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~-~~~~g~iv~vsS~~~~~~~~~~~~  153 (251)
                      |+||||||+...  .    .+.+.++|++.+++|+.+++.++++++|+|+++... .++.|+||++||.++..       
T Consensus        83 d~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~~~~~g~iv~isS~~~~~-------  155 (257)
T 3tpc_A           83 HGLVNCAGTAPGEKILGRSGPHALDSFARTVAVNLIGTFNMIRLAAEVMSQGEPDADGERGVIVNTASIAAFD-------  155 (257)
T ss_dssp             CEEEECCCCCCCCCSEETTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHHHH-------
T ss_pred             CEEEECCCCCCCCccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccccCCCCCeEEEEEechhhcc-------
Confidence            999999997643  2    256789999999999999999999999999874211 12468999999998877       


Q ss_pred             cccCCCCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCC
Q 025509          154 FDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRHN  212 (251)
Q Consensus       154 ~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~~  212 (251)
                              +.++...|++||+|+++|+++++.|++++|  |+||+|+||+|+|++....
T Consensus       156 --------~~~~~~~Y~asKaa~~~~~~~la~e~~~~g--i~vn~v~PG~v~t~~~~~~  204 (257)
T 3tpc_A          156 --------GQIGQAAYAASKGGVAALTLPAARELARFG--IRVVTIAPGIFDTPMMAGM  204 (257)
T ss_dssp             --------CCTTCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECCBSCC-----
T ss_pred             --------CCCCCcchHHHHHHHHHHHHHHHHHHHHcC--eEEEEEEeCCCCChhhccC
Confidence                    677888999999999999999999999999  9999999999999997653

>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}

Probab=100.00  E-value=5.8e-38  Score=264.26  Aligned_cols=186  Identities=22%  Similarity=0.262  Sum_probs=169.4

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      |++|||||++|||+++|++|+++|++|++++|+++.+++..+++.+.  +..+.++.+|+++.++++++++++.+. +++
T Consensus        34 k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~~~~~~~~~~~~-g~i  110 (275)
T 4imr_A           34 RTALVTGSSRGIGAAIAEGLAGAGAHVILHGVKPGSTAAVQQRIIAS--GGTAQELAGDLSEAGAGTDLIERAEAI-APV  110 (275)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSTTTTHHHHHHHHHT--TCCEEEEECCTTSTTHHHHHHHHHHHH-SCC
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhc--CCeEEEEEecCCCHHHHHHHHHHHHHh-CCC
Confidence            68999999999999999999999999999999999988888888664  567999999999999999999998877 899


Q ss_pred             eEEEEcCCCCC--CCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccccCC
Q 025509           81 NILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKIN  158 (251)
Q Consensus        81 d~lv~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~  158 (251)
                      |+||||||+..  ++.+.+.++|++.+++|+.|++.++++++|+|+++     +.|+||++||..+..            
T Consensus       111 D~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~-----~~g~Iv~isS~~~~~------------  173 (275)
T 4imr_A          111 DILVINASAQINATLSALTPNDLAFQLAVNLGSTVDMLQSALPKMVAR-----KWGRVVSIGSINQLR------------  173 (275)
T ss_dssp             CEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----TCEEEEEECCGGGTS------------
T ss_pred             CEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-----CCcEEEEECCHHhCC------------
Confidence            99999999754  35678999999999999999999999999999886     468999999988765            


Q ss_pred             CCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccC
Q 025509          159 DPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  211 (251)
Q Consensus       159 ~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  211 (251)
                         +.+....|++||+|+++|+++++.|+++.|  |+||+|+||+++|++...
T Consensus       174 ---~~~~~~~Y~asKaa~~~l~~~la~e~~~~g--I~vn~v~PG~v~T~~~~~  221 (275)
T 4imr_A          174 ---PKSVVTAYAATKAAQHNLIQSQARDFAGDN--VLLNTLAPGLVDTDRNAD  221 (275)
T ss_dssp             ---CCTTBHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEESSBCSHHHHH
T ss_pred             ---CCCCchhhHHHHHHHHHHHHHHHHHhcccC--cEEEEEEeccccCccccc
Confidence               556677899999999999999999999999  999999999999998654

>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile}

Probab=100.00  E-value=1.1e-37  Score=267.73  Aligned_cols=188  Identities=26%  Similarity=0.280  Sum_probs=168.3

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecC------------chhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHH
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRD------------IAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRN   68 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~------------~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~   68 (251)
                      |++|||||++|||+++|++|+++|++|++++|+            .+.+++..+.+.+.  +..+.++++|++|++++++
T Consensus        47 k~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dv~d~~~v~~  124 (317)
T 3oec_A           47 KVAFITGAARGQGRTHAVRLAQDGADIVAIDLCRQQPNLDYAQGSPEELKETVRLVEEQ--GRRIIARQADVRDLASLQA  124 (317)
T ss_dssp             CEEEESSCSSHHHHHHHHHHHHTTCEEEEEECCCCCTTCCSCCCCHHHHHHHHHHHHHT--TCCEEEEECCTTCHHHHHH
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCeEEEEecccccccccccccCHHHHHHHHHHHHhc--CCeEEEEECCCCCHHHHHH
Confidence            689999999999999999999999999999886            45566666655544  5679999999999999999


Q ss_pred             HHHHHHhcCCCeeEEEEcCCCCC--CCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccc
Q 025509           69 FASEYNIQHHQLNILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRL  146 (251)
Q Consensus        69 ~~~~~~~~~g~id~lv~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~  146 (251)
                      +++++.+++|++|+||||||+..  ++.+.+.++|++.+++|+.+++.++++++|+|+++.    ..|+||++||..+..
T Consensus       125 ~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~----~~g~Iv~isS~~~~~  200 (317)
T 3oec_A          125 VVDEALAEFGHIDILVSNVGISNQGEVVSLTDQQWSDILQTNLIGAWHACRAVLPSMIERG----QGGSVIFVSSTVGLR  200 (317)
T ss_dssp             HHHHHHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTC----SCEEEEEECCGGGSS
T ss_pred             HHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC----CCCEEEEECcHHhcC
Confidence            99999999999999999999764  366789999999999999999999999999998852    368999999988876


Q ss_pred             cccCCcccccCCCCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccC
Q 025509          147 AYHEGIRFDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  211 (251)
Q Consensus       147 ~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  211 (251)
                                     +.++...|++||+|+++|+++|+.|+++.|  |+||+|+||+|+|++...
T Consensus       201 ---------------~~~~~~~Y~asKaa~~~l~~~la~e~~~~g--I~vn~v~PG~v~T~~~~~  248 (317)
T 3oec_A          201 ---------------GAPGQSHYAASKHGVQGLMLSLANEVGRHN--IRVNSVNPGAVNTEMALN  248 (317)
T ss_dssp             ---------------CCTTBHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECSBSSHHHHC
T ss_pred             ---------------CCCCCcchHHHHHHHHHHHHHHHHHHhhcC--eEEEEEecCcccCccccc
Confidence                           677888999999999999999999999999  999999999999998653

>3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae}

Probab=100.00  E-value=2.7e-37  Score=257.26  Aligned_cols=182  Identities=24%  Similarity=0.287  Sum_probs=164.8

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcC--CEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCC
Q 025509            1 MDIVITGATSGIGTETARVLALRG--VHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHH   78 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G--~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g   78 (251)
                      |++|||||++|||+++|++|+++|  ++|++++|+++.++++.+++     +.++.++++|++|.++++++++++.+++|
T Consensus         3 k~~lVTGas~GIG~aia~~l~~~g~~~~v~~~~r~~~~~~~~~~~~-----~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   77 (254)
T 3kzv_A            3 KVILVTGVSRGIGKSIVDVLFSLDKDTVVYGVARSEAPLKKLKEKY-----GDRFFYVVGDITEDSVLKQLVNAAVKGHG   77 (254)
T ss_dssp             CEEEECSTTSHHHHHHHHHHHHHCSSCEEEEEESCHHHHHHHHHHH-----GGGEEEEESCTTSHHHHHHHHHHHHHHHS
T ss_pred             CEEEEECCCchHHHHHHHHHHhcCCCeEEEEecCCHHHHHHHHHHh-----CCceEEEECCCCCHHHHHHHHHHHHHhcC
Confidence            689999999999999999999985  68999999988887776655     45799999999999999999999999999


Q ss_pred             CeeEEEEcCCCC---CCCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccc
Q 025509           79 QLNILINNAGIM---GTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFD  155 (251)
Q Consensus        79 ~id~lv~~ag~~---~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~  155 (251)
                      ++|+||||||+.   .++.+.+.++|++.+++|+.+++.++++++|+|+++      +|+||++||..+..         
T Consensus        78 ~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~------~g~iv~isS~~~~~---------  142 (254)
T 3kzv_A           78 KIDSLVANAGVLEPVQNVNEIDVNAWKKLYDINFFSIVSLVGIALPELKKT------NGNVVFVSSDACNM---------  142 (254)
T ss_dssp             CCCEEEEECCCCCCCTTTTSCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH------TCEEEEECCSCCCC---------
T ss_pred             CccEEEECCcccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc------CCeEEEEcCchhcc---------
Confidence            999999999974   346678999999999999999999999999999885      48999999988776         


Q ss_pred             cCCCCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCC
Q 025509          156 KINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRHN  212 (251)
Q Consensus       156 ~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~~  212 (251)
                            +.+++..|++||+|+++|+++|+.|+  .|  |+||+|+||+++|++....
T Consensus       143 ------~~~~~~~Y~asK~a~~~~~~~la~e~--~~--i~vn~v~PG~v~t~~~~~~  189 (254)
T 3kzv_A          143 ------YFSSWGAYGSSKAALNHFAMTLANEE--RQ--VKAIAVAPGIVDTDMQVNI  189 (254)
T ss_dssp             ------SSCCSHHHHHHHHHHHHHHHHHHHHC--TT--SEEEEEECSSCCCCCSCCC
T ss_pred             ------CCCCcchHHHHHHHHHHHHHHHHhhc--cC--cEEEEEeCCcccchhHHHh
Confidence                  67788899999999999999999998  46  9999999999999998754

>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A

Probab=100.00  E-value=1.6e-37  Score=260.87  Aligned_cols=185  Identities=21%  Similarity=0.298  Sum_probs=164.5

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEec-CchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCC
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVR-DIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQ   79 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r-~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~   79 (251)
                      |++|||||++|||+++|++|+++|++|+++++ +.+.+++..+++.+.  +.++.++++|++|.++++++++++.+++|+
T Consensus        19 k~~lVTGas~gIG~aia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   96 (270)
T 3is3_A           19 KVALVTGSGRGIGAAVAVHLGRLGAKVVVNYANSTKDAEKVVSEIKAL--GSDAIAIKADIRQVPEIVKLFDQAVAHFGH   96 (270)
T ss_dssp             CEEEESCTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT--TCCEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhc--CCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            68999999999999999999999999999776 455667777777654  567999999999999999999999999999


Q ss_pred             eeEEEEcCCCCC--CCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccccC
Q 025509           80 LNILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKI  157 (251)
Q Consensus        80 id~lv~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~  157 (251)
                      +|+||||||+..  ++.+.+.++|++.+++|+.+++.++++++|+|++       .|+||++||..+..           
T Consensus        97 id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~-------~g~iv~isS~~~~~-----------  158 (270)
T 3is3_A           97 LDIAVSNSGVVSFGHLKDVTEEEFDRVFSLNTRGQFFVAREAYRHLTE-------GGRIVLTSSNTSKD-----------  158 (270)
T ss_dssp             CCEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCT-------TCEEEEECCTTTTT-----------
T ss_pred             CCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhc-------CCeEEEEeCchhcc-----------
Confidence            999999999763  3567899999999999999999999999999864       58999999977322           


Q ss_pred             CCCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCccc
Q 025509          158 NDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIR  210 (251)
Q Consensus       158 ~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~  210 (251)
                         .+.++...|++||+|+++|+++|+.|++++|  |+||+|+||+++|++..
T Consensus       159 ---~~~~~~~~Y~asKaa~~~~~~~la~e~~~~g--i~vn~v~PG~v~T~~~~  206 (270)
T 3is3_A          159 ---FSVPKHSLYSGSKGAVDSFVRIFSKDCGDKK--ITVNAVAPGGTVTDMFH  206 (270)
T ss_dssp             ---CCCTTCHHHHHHHHHHHHHHHHHHHHHGGGT--CEEEEEEECSBCSTTHH
T ss_pred             ---CCCCCCchhHHHHHHHHHHHHHHHHHhcccC--eEEEEEEeCCccChhhh
Confidence               1567788999999999999999999999999  99999999999999976

>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}

Probab=100.00  E-value=2.3e-37  Score=260.08  Aligned_cols=187  Identities=27%  Similarity=0.337  Sum_probs=165.8

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecC-chhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCC
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRD-IAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQ   79 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~-~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~   79 (251)
                      |++|||||++|||+++|++|+++|++|++++++ .+.+++..+++.+.  +..+.++.+|++|+++++++++++.+++|+
T Consensus        32 k~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~  109 (271)
T 3v2g_A           32 KTAFVTGGSRGIGAAIAKRLALEGAAVALTYVNAAERAQAVVSEIEQA--GGRAVAIRADNRDAEAIEQAIRETVEALGG  109 (271)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT--TCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhc--CCcEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            689999999999999999999999999998765 45667777776554  567899999999999999999999999999


Q ss_pred             eeEEEEcCCCCC--CCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccccC
Q 025509           80 LNILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKI  157 (251)
Q Consensus        80 id~lv~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~  157 (251)
                      +|+||||||+..  ++.+.+.++|++.+++|+.+++.++++++|+|++       .|+||++||..+...          
T Consensus       110 iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~-------~g~iv~isS~~~~~~----------  172 (271)
T 3v2g_A          110 LDILVNSAGIWHSAPLEETTVADFDEVMAVNFRAPFVAIRSASRHLGD-------GGRIITIGSNLAELV----------  172 (271)
T ss_dssp             CCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCT-------TCEEEEECCGGGTCC----------
T ss_pred             CcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhc-------CCEEEEEeChhhccC----------
Confidence            999999999763  4567899999999999999999999999999854       589999999766541          


Q ss_pred             CCCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCC
Q 025509          158 NDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRHN  212 (251)
Q Consensus       158 ~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~~  212 (251)
                          +.++...|++||+|+++|+++++.|++++|  |+||+|+||+|+|++....
T Consensus       173 ----~~~~~~~Y~asKaa~~~l~~~la~e~~~~g--Irvn~v~PG~v~T~~~~~~  221 (271)
T 3v2g_A          173 ----PWPGISLYSASKAALAGLTKGLARDLGPRG--ITVNIVHPGSTDTDMNPAD  221 (271)
T ss_dssp             ----CSTTCHHHHHHHHHHHHHHHHHHHHHGGGT--CEEEEEEECSBCSSSSCSS
T ss_pred             ----CCCCchHHHHHHHHHHHHHHHHHHHhhhhC--eEEEEEecCCCcCCccccc
Confidence                467888999999999999999999999999  9999999999999997653

>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2

Probab=100.00  E-value=2.3e-37  Score=257.83  Aligned_cols=186  Identities=26%  Similarity=0.322  Sum_probs=168.8

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      |++|||||++|||+++|++|+++|++|++++|+.+++++..+++.+.  +.++.++++|++|.++++++++++.+++|++
T Consensus         3 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~i   80 (256)
T 1geg_A            3 KVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQA--GGHAVAVKVDVSDRDQVFAAVEQARKTLGGF   80 (256)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT--TCCEEEEECCTTSHHHHHHHHHHHHHHTTCC
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCcEEEEEecCCCHHHHHHHHHHHHHHhCCC
Confidence            68999999999999999999999999999999988888877777554  4568899999999999999999999999999


Q ss_pred             eEEEEcCCCCC--CCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCC-CceEEEEcCccccccccCCcccccC
Q 025509           81 NILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGG-EGRIINVSSEGHRLAYHEGIRFDKI  157 (251)
Q Consensus        81 d~lv~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~-~g~iv~vsS~~~~~~~~~~~~~~~~  157 (251)
                      |+||||||+..  ++.+.+.++|++.+++|+.+++.++++++|+|+++     + .++||++||..+..           
T Consensus        81 d~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~-----~~~g~iv~isS~~~~~-----------  144 (256)
T 1geg_A           81 DVIVNNAGVAPSTPIESITPEIVDKVYNINVKGVIWGIQAAVEAFKKE-----GHGGKIINACSQAGHV-----------  144 (256)
T ss_dssp             CEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----TSCEEEEEECCGGGTS-----------
T ss_pred             CEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-----CCCCEEEEECchhhcC-----------
Confidence            99999999753  35677889999999999999999999999999886     3 58999999988766           


Q ss_pred             CCCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCccc
Q 025509          158 NDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIR  210 (251)
Q Consensus       158 ~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~  210 (251)
                          +.++...|++||+++++|+++++.|+++.|  |+||+|+||+++|++..
T Consensus       145 ----~~~~~~~Y~asK~a~~~~~~~la~e~~~~g--i~v~~v~PG~v~t~~~~  191 (256)
T 1geg_A          145 ----GNPELAVYSSSKFAVRGLTQTAARDLAPLG--ITVNGYCPGIVKTPMWA  191 (256)
T ss_dssp             ----CCTTBHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECSBSSHHHH
T ss_pred             ----CCCCchhHHHHHHHHHHHHHHHHHHHHHcC--eEEEEEEECCCccchhh
Confidence                567788999999999999999999999999  99999999999999865

>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum}

Probab=100.00  E-value=1.2e-37  Score=259.76  Aligned_cols=187  Identities=22%  Similarity=0.316  Sum_probs=168.2

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchh--HHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCC
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAA--GKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHH   78 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~--~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g   78 (251)
                      |++|||||++|||+++|++|+++|++|++++|+.+.  +++..+++.+.  +.++.++++|++++++++++++++.+++|
T Consensus         3 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   80 (258)
T 3a28_C            3 KVAMVTGGAQGIGRGISEKLAADGFDIAVADLPQQEEQAAETIKLIEAA--DQKAVFVGLDVTDKANFDSAIDEAAEKLG   80 (258)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHTCEEEEEECGGGHHHHHHHHHHHHTT--TCCEEEEECCTTCHHHHHHHHHHHHHHHT
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHHhc--CCcEEEEEccCCCHHHHHHHHHHHHHHhC
Confidence            689999999999999999999999999999999877  77777666543  45789999999999999999999999999


Q ss_pred             CeeEEEEcCCCCC--CCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCC-ceEEEEcCccccccccCCcccc
Q 025509           79 QLNILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGE-GRIINVSSEGHRLAYHEGIRFD  155 (251)
Q Consensus        79 ~id~lv~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~-g~iv~vsS~~~~~~~~~~~~~~  155 (251)
                      ++|+||||||+..  ++.+.+.++|++.+++|+.+++.++++++|+|+++     +. ++||++||..+..         
T Consensus        81 ~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~-----~~~g~iv~isS~~~~~---------  146 (258)
T 3a28_C           81 GFDVLVNNAGIAQIKPLLEVTEEDLKQIYSVNVFSVFFGIQAASRKFDEL-----GVKGKIINAASIAAIQ---------  146 (258)
T ss_dssp             CCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----TCCCEEEEECCGGGTS---------
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhc-----CCCcEEEEECcchhcc---------
Confidence            9999999999753  35577899999999999999999999999999876     34 8999999988765         


Q ss_pred             cCCCCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccC
Q 025509          156 KINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  211 (251)
Q Consensus       156 ~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  211 (251)
                            +.++...|++||+++++|+++++.|++++|  |+||+|+||+++|++...
T Consensus       147 ------~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g--i~vn~v~PG~v~t~~~~~  194 (258)
T 3a28_C          147 ------GFPILSAYSTTKFAVRGLTQAAAQELAPKG--HTVNAYAPGIVGTGMWEQ  194 (258)
T ss_dssp             ------CCTTCHHHHHHHHHHHHHHHHHHHHHGGGT--CEEEEEEECCBCSHHHHH
T ss_pred             ------CCCCchhHHHHHHHHHHHHHHHHHHHHhhC--eEEEEEECCccCChhhhh
Confidence                  567788999999999999999999999999  999999999999998653

>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}

Probab=100.00  E-value=1e-37  Score=261.54  Aligned_cols=184  Identities=25%  Similarity=0.361  Sum_probs=167.9

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      |++|||||++|||+++|++|+++|++|++++|+.+.+++..+++.+..++..+.++.+|+++.++++++++    +++++
T Consensus        11 k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~----~~g~i   86 (267)
T 3t4x_A           11 KTALVTGSTAGIGKAIATSLVAEGANVLINGRREENVNETIKEIRAQYPDAILQPVVADLGTEQGCQDVIE----KYPKV   86 (267)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHCTTCEEEEEECCTTSHHHHHHHHH----HCCCC
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEecCCCCHHHHHHHHH----hcCCC
Confidence            58999999999999999999999999999999999999999999888777788999999999999887765    46899


Q ss_pred             eEEEEcCCCCC--CCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccccCC
Q 025509           81 NILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKIN  158 (251)
Q Consensus        81 d~lv~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~  158 (251)
                      |+||||||+..  ++.+.+.++|++.+++|+.+++.++++++|+|+++     +.|+||++||..+..            
T Consensus        87 d~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~-----~~g~iv~isS~~~~~------------  149 (267)
T 3t4x_A           87 DILINNLGIFEPVEYFDIPDEDWFKLFEVNIMSGVRLTRSYLKKMIER-----KEGRVIFIASEAAIM------------  149 (267)
T ss_dssp             SEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT-----TEEEEEEECCGGGTS------------
T ss_pred             CEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhC-----CCCEEEEEcchhhcc------------
Confidence            99999999764  35678899999999999999999999999999885     468999999988876            


Q ss_pred             CCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCccc
Q 025509          159 DPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIR  210 (251)
Q Consensus       159 ~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~  210 (251)
                         +.++...|++||+|+++|+++++.|+++.|  |+||+|+||+++|++..
T Consensus       150 ---~~~~~~~Y~asKaa~~~l~~~la~e~~~~g--i~vn~v~PG~v~t~~~~  196 (267)
T 3t4x_A          150 ---PSQEMAHYSATKTMQLSLSRSLAELTTGTN--VTVNTIMPGSTLTEGVE  196 (267)
T ss_dssp             ---CCTTCHHHHHHHHHHHHHHHHHHHHTTTSE--EEEEEEEECCBCCHHHH
T ss_pred             ---CCCcchHHHHHHHHHHHHHHHHHHHhCCCC--eEEEEEeCCeecCccHH
Confidence               677888999999999999999999999999  99999999999999754

>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B}

Probab=100.00  E-value=2.4e-37  Score=259.57  Aligned_cols=188  Identities=24%  Similarity=0.293  Sum_probs=167.3

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEe-cCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCC
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGV-RDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQ   79 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~-r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~   79 (251)
                      |++|||||++|||+++|++|+++|++|++++ ++.+..++..+++.+.  +.++.++.+|++|.++++++++++.+++|+
T Consensus        26 k~vlITGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~  103 (269)
T 3gk3_A           26 RVAFVTGGMGGLGAAISRRLHDAGMAVAVSHSERNDHVSTWLMHERDA--GRDFKAYAVDVADFESCERCAEKVLADFGK  103 (269)
T ss_dssp             CEEEETTTTSHHHHHHHHHHHTTTCEEEEEECSCHHHHHHHHHHHHTT--TCCCEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHhc--CCceEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence            5799999999999999999999999999998 5555555555555433  567999999999999999999999999999


Q ss_pred             eeEEEEcCCCCC--CCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccccC
Q 025509           80 LNILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKI  157 (251)
Q Consensus        80 id~lv~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~  157 (251)
                      +|+||||||+..  ++.+.+.++|+..+++|+.+++.++++++|+|+++     +.|+||++||..+..           
T Consensus       104 id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~-----~~g~iv~isS~~~~~-----------  167 (269)
T 3gk3_A          104 VDVLINNAGITRDATFMKMTKGDWDAVMRTDLDAMFNVTKQFIAGMVER-----RFGRIVNIGSVNGSR-----------  167 (269)
T ss_dssp             CSEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----TCEEEEEECCHHHHH-----------
T ss_pred             CCEEEECCCcCCCcchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-----CCCEEEEeCChhhcc-----------
Confidence            999999999764  35678899999999999999999999999999886     468999999988877           


Q ss_pred             CCCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCC
Q 025509          158 NDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRHN  212 (251)
Q Consensus       158 ~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~~  212 (251)
                          +.+++..|++||+|+++|+++++.|+.+.|  |+||+|+||+++|++.+..
T Consensus       168 ----~~~~~~~Y~asKaa~~~~~~~la~e~~~~g--i~v~~v~PG~v~T~~~~~~  216 (269)
T 3gk3_A          168 ----GAFGQANYASAKAGIHGFTKTLALETAKRG--ITVNTVSPGYLATAMVEAV  216 (269)
T ss_dssp             ----CCTTBHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECSBCCTTTTC-
T ss_pred             ----CCCCcchHHHHHHHHHHHHHHHHHHhhhcC--CEEEEEecCcccchhhhhh
Confidence                677888999999999999999999999999  9999999999999998754

>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A*

Probab=100.00  E-value=1.4e-37  Score=259.66  Aligned_cols=188  Identities=31%  Similarity=0.324  Sum_probs=165.2

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchh-HHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCC
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAA-GKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQ   79 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~-~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~   79 (251)
                      |++|||||++|||+++|++|+++|++|++++|+.+. +++..+++.+.. +.++.++.+|++|+++++++++++.+++|+
T Consensus         5 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~   83 (260)
T 1x1t_A            5 KVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQH-GVKVLYDGADLSKGEAVRGLVDNAVRQMGR   83 (260)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEECCSCHHHHHHHHHHHHHHH-TSCEEEECCCTTSHHHHHHHHHHHHHHHSC
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHHhcc-CCcEEEEECCCCCHHHHHHHHHHHHHhcCC
Confidence            689999999999999999999999999999999877 777777765532 346889999999999999999999999999


Q ss_pred             eeEEEEcCCCCC--CCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccccC
Q 025509           80 LNILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKI  157 (251)
Q Consensus        80 id~lv~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~  157 (251)
                      +|+||||||+..  ++.+.+.++|++.+++|+.+++.++++++|+|+++     +.++||++||..+..           
T Consensus        84 iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~-----~~g~iv~isS~~~~~-----------  147 (260)
T 1x1t_A           84 IDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQ-----GFGRIINIASAHGLV-----------  147 (260)
T ss_dssp             CSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----TCEEEEEECCGGGTS-----------
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-----CCCEEEEECcHHhCc-----------
Confidence            999999999754  35677889999999999999999999999999876     468999999988765           


Q ss_pred             CCCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccC
Q 025509          158 NDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  211 (251)
Q Consensus       158 ~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  211 (251)
                          +.++...|++||+++++|+++++.|++++|  |+||+|+||+++|++...
T Consensus       148 ----~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g--i~v~~v~Pg~v~t~~~~~  195 (260)
T 1x1t_A          148 ----ASANKSAYVAAKHGVVGFTKVTALETAGQG--ITANAICPGWVRTPLVEK  195 (260)
T ss_dssp             ----CCTTCHHHHHHHHHHHHHHHHHHHHHTTTT--EEEEEEEECCBCC-----
T ss_pred             ----CCCCCchHHHHHHHHHHHHHHHHHHhccCC--EEEEEEeecCccCchHHH
Confidence                567788999999999999999999999999  999999999999998764

>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2

Probab=100.00  E-value=1.4e-37  Score=259.95  Aligned_cols=187  Identities=22%  Similarity=0.247  Sum_probs=169.4

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      |++|||||++|||+++|++|+++|++|++++|+.+.+++..+++.+.  +.++.++++|++++++++++++++.+++|++
T Consensus         8 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i   85 (262)
T 1zem_A            8 KVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREK--GVEARSYVCDVTSEEAVIGTVDSVVRDFGKI   85 (262)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTT--TSCEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCcEEEEEecCCCHHHHHHHHHHHHHHhCCC
Confidence            68999999999999999999999999999999988888877777554  4578999999999999999999999999999


Q ss_pred             eEEEEcCCCC-C--CCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccccC
Q 025509           81 NILINNAGIM-G--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKI  157 (251)
Q Consensus        81 d~lv~~ag~~-~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~  157 (251)
                      |+||||||+. .  ++.+.+.++|++.+++|+.+++.++++++|+|.++     +.|+||++||..+..           
T Consensus        86 d~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~-----~~g~iv~isS~~~~~-----------  149 (262)
T 1zem_A           86 DFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVLKAVSRQMITQ-----NYGRIVNTASMAGVK-----------  149 (262)
T ss_dssp             CEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----TCEEEEEECCHHHHS-----------
T ss_pred             CEEEECCCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-----CCcEEEEEcchhhcc-----------
Confidence            9999999975 2  35677899999999999999999999999999876     468999999988776           


Q ss_pred             CCCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccC
Q 025509          158 NDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  211 (251)
Q Consensus       158 ~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  211 (251)
                          +.++...|++||+++++|+++++.|+++.|  |+||+|+||++.|++...
T Consensus       150 ----~~~~~~~Y~asK~a~~~~~~~la~e~~~~g--i~vn~v~PG~v~t~~~~~  197 (262)
T 1zem_A          150 ----GPPNMAAYGTSKGAIIALTETAALDLAPYN--IRVNAISPGYMGPGFMWE  197 (262)
T ss_dssp             ----CCTTBHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECSBCSSHHHH
T ss_pred             ----CCCCCchHHHHHHHHHHHHHHHHHHHHhhC--eEEEEEecCCcCcchhhh
Confidence                567788999999999999999999999999  999999999999998653

>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}

Probab=100.00  E-value=1.7e-37  Score=259.58  Aligned_cols=188  Identities=27%  Similarity=0.343  Sum_probs=166.0

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      |++|||||++|||+++|++|+++|++|++++|+.+++++..+++.+.  +..+.++.+|+++.+++.++++++.+.+|++
T Consensus        30 k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~i  107 (262)
T 3rkr_A           30 QVAVVTGASRGIGAAIARKLGSLGARVVLTARDVEKLRAVEREIVAA--GGEAESHACDLSHSDAIAAFATGVLAAHGRC  107 (262)
T ss_dssp             CEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT--TCEEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHh--CCceeEEEecCCCHHHHHHHHHHHHHhcCCC
Confidence            58999999999999999999999999999999999998888888665  5679999999999999999999999999999


Q ss_pred             eEEEEcCCCC---CCCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccccC
Q 025509           81 NILINNAGIM---GTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKI  157 (251)
Q Consensus        81 d~lv~~ag~~---~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~  157 (251)
                      |+||||||+.   .+..+.+.++|++.+++|+.+++.++++++|+|+++     +.|+||++||.++..           
T Consensus       108 d~lv~~Ag~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~-----~~g~iv~isS~~~~~-----------  171 (262)
T 3rkr_A          108 DVLVNNAGVGWFGGPLHTMKPAEWDALIAVNLKAPYLLLRAFAPAMIAA-----KRGHIINISSLAGKN-----------  171 (262)
T ss_dssp             SEEEECCCCCCCSSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT-----TCCEEEEECSSCSSC-----------
T ss_pred             CEEEECCCccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhC-----CCceEEEEechhhcC-----------
Confidence            9999999973   235678899999999999999999999999999875     468999999988776           


Q ss_pred             CCCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCC
Q 025509          158 NDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRHN  212 (251)
Q Consensus       158 ~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~~  212 (251)
                          +.++...|++||+|+++|+++++.|+.+.|  |+|++|+||+++|++....
T Consensus       172 ----~~~~~~~Y~asKaa~~~l~~~la~e~~~~g--i~v~~v~PG~v~t~~~~~~  220 (262)
T 3rkr_A          172 ----PVADGAAYTASKWGLNGLMTSAAEELRQHQ--VRVSLVAPGSVRTEFGVGL  220 (262)
T ss_dssp             ----CCTTCHHHHHHHHHHHHHHHHHHHHHGGGT--CEEEEEEECCC--------
T ss_pred             ----CCCCCchHHHHHHHHHHHHHHHHHHhhhcC--cEEEEEecCCCcCCccccc
Confidence                677888999999999999999999999999  9999999999999997653

>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}

Probab=100.00  E-value=2.2e-37  Score=266.00  Aligned_cols=195  Identities=21%  Similarity=0.215  Sum_probs=169.7

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      |+||||||++|||+++|++|+++|++|++++|+.+++++..+++.....+..+.++.+|+++.++++++++++.+.++++
T Consensus         9 k~vlVTGas~gIG~~la~~l~~~G~~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~i   88 (319)
T 3ioy_A            9 RTAFVTGGANGVGIGLVRQLLNQGCKVAIADIRQDSIDKALATLEAEGSGPEVMGVQLDVASREGFKMAADEVEARFGPV   88 (319)
T ss_dssp             CEEEEETTTSTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEECCTTCHHHHHHHHHHHHHHTCCE
T ss_pred             CEEEEcCCchHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCeEEEEECCCCCHHHHHHHHHHHHHhCCCC
Confidence            58999999999999999999999999999999999999998888776444489999999999999999999999999999


Q ss_pred             eEEEEcCCCCC--CCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhcc-CCCCceEEEEcCccccccccCCcccccC
Q 025509           81 NILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARK-SGGEGRIINVSSEGHRLAYHEGIRFDKI  157 (251)
Q Consensus        81 d~lv~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~-~~~~g~iv~vsS~~~~~~~~~~~~~~~~  157 (251)
                      |+||||||+..  ++.+.+.++|++++++|+.|++.++++++|.|.++.+. ....|+||++||.++..           
T Consensus        89 d~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~iV~isS~a~~~-----------  157 (319)
T 3ioy_A           89 SILCNNAGVNLFQPIEESSYDDWDWLLGVNLHGVVNGVTTFVPRMVERVKAGEQKGGHVVNTASMAAFL-----------  157 (319)
T ss_dssp             EEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHTTSCCCCEEEEECCGGGTC-----------
T ss_pred             CEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhhhccCCCCcEEEEeccccccc-----------
Confidence            99999999753  46677889999999999999999999999999875211 12468999999998877           


Q ss_pred             CCCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCC
Q 025509          158 NDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRHN  212 (251)
Q Consensus       158 ~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~~  212 (251)
                          +.+++..|++||+|+++|+++++.|+.+.|  |+|++|+||+|.|++....
T Consensus       158 ----~~~~~~~Y~aSKaal~~~~~~la~e~~~~g--i~v~~v~PG~v~T~~~~~~  206 (319)
T 3ioy_A          158 ----AAGSPGIYNTTKFAVRGLSESLHYSLLKYE--IGVSVLCPGLVKSYIYASD  206 (319)
T ss_dssp             ----CCSSSHHHHHHHHHHHHHHHHHHHHHGGGT--CEEEEECCCCBC-------
T ss_pred             ----CCCCCHHHHHHHHHHHHHHHHHHHHhhhcC--CEEEEEEcCeEccCccccc
Confidence                677888999999999999999999999989  9999999999999997753

>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}

Probab=100.00  E-value=3.5e-37  Score=256.02  Aligned_cols=185  Identities=26%  Similarity=0.326  Sum_probs=151.5

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      |++|||||++|||+++|++|+++|++|++++|+.+.+++..+++.+.  +..+.++.+|++|+++++++++++.+.++++
T Consensus        10 k~vlITGas~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i   87 (253)
T 3qiv_A           10 KVGIVTGSGGGIGQAYAEALAREGAAVVVADINAEAAEAVAKQIVAD--GGTAISVAVDVSDPESAKAMADRTLAEFGGI   87 (253)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT--TCEEEEEECCTTSHHHHHHHHHHHHHHHSCC
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhc--CCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            68999999999999999999999999999999999999888888665  5679999999999999999999999999999


Q ss_pred             eEEEEcCCCCC-----CCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccc
Q 025509           81 NILINNAGIMG-----TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFD  155 (251)
Q Consensus        81 d~lv~~ag~~~-----~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~  155 (251)
                      |+||||||+..     +..+.+.++|++.+++|+.+++.++++++|+|+++     +.++||++||..+.          
T Consensus        88 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~-----~~g~iv~isS~~~~----------  152 (253)
T 3qiv_A           88 DYLVNNAAIFGGMKLDFLLTIDPEYYKKFMSVNLDGALWCTRAVYKKMTKR-----GGGAIVNQSSTAAW----------  152 (253)
T ss_dssp             CEEEECCCCCCGGGGGCTTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----TCEEEEEECC--------------
T ss_pred             CEEEECCCcCCCCCCcccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhc-----CCCEEEEECCcccc----------
Confidence            99999999742     24567899999999999999999999999999886     57899999997654          


Q ss_pred             cCCCCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCC
Q 025509          156 KINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRHN  212 (251)
Q Consensus       156 ~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~~  212 (251)
                              +....|++||+|+++|+++++.|+.+.|  |+||+|+||+++|++....
T Consensus       153 --------~~~~~Y~asK~a~~~~~~~la~e~~~~g--i~v~~v~PG~v~t~~~~~~  199 (253)
T 3qiv_A          153 --------LYSNYYGLAKVGINGLTQQLSRELGGRN--IRINAIAPGPIDTEANRTT  199 (253)
T ss_dssp             ---------------CCHHHHHHHHHHHHHHTTTTT--EEEEEEEC-----------
T ss_pred             --------CCCchhHHHHHHHHHHHHHHHHHHhhcC--eEEEEEEecCCcccchhhc
Confidence                    3456899999999999999999999999  9999999999999987654

>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A*

Probab=100.00  E-value=2.8e-37  Score=256.33  Aligned_cols=183  Identities=29%  Similarity=0.381  Sum_probs=158.8

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCc-hhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCC
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDI-AAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQ   79 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~-~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~   79 (251)
                      |++|||||++|||+++|++|+++|++|++++|++ +++++   .+.+.  +.++.++++|++++++++++++++.+++++
T Consensus         8 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~---~~~~~--~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   82 (249)
T 2ew8_A            8 KLAVITGGANGIGRAIAERFAVEGADIAIADLVPAPEAEA---AIRNL--GRRVLTVKCDVSQPGDVEAFGKQVISTFGR   82 (249)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCHHHHH---HHHHT--TCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCchhHHHH---HHHhc--CCcEEEEEeecCCHHHHHHHHHHHHHHcCC
Confidence            5899999999999999999999999999999987 65554   33222  457899999999999999999999999999


Q ss_pred             eeEEEEcCCCCC--CCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccccC
Q 025509           80 LNILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKI  157 (251)
Q Consensus        80 id~lv~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~  157 (251)
                      +|+||||||+..  ++.+.+.++|++.+++|+.+++.++++++|+|+++     +.++||++||..+..           
T Consensus        83 id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~-----~~g~iv~isS~~~~~-----------  146 (249)
T 2ew8_A           83 CDILVNNAGIYPLIPFDELTFEQWKKTFEINVDSGFLMAKAFVPGMKRN-----GWGRIINLTSTTYWL-----------  146 (249)
T ss_dssp             CCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----TCEEEEEECCGGGGS-----------
T ss_pred             CCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-----CCeEEEEEcchhhcc-----------
Confidence            999999999753  35677889999999999999999999999999876     468999999988776           


Q ss_pred             CCCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCccc
Q 025509          158 NDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIR  210 (251)
Q Consensus       158 ~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~  210 (251)
                          +.++...|++||+++++|+++++.|+++.|  |+||+|+||+++|++..
T Consensus       147 ----~~~~~~~Y~asK~a~~~~~~~la~e~~~~g--i~v~~v~Pg~v~t~~~~  193 (249)
T 2ew8_A          147 ----KIEAYTHYISTKAANIGFTRALASDLGKDG--ITVNAIAPSLVRTATTE  193 (249)
T ss_dssp             ----CCSSCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECCC------
T ss_pred             ----CCCCchhHHHHHHHHHHHHHHHHHHHHhcC--cEEEEEecCcCcCccch
Confidence                667788999999999999999999999999  99999999999999876

>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2

Probab=100.00  E-value=2.6e-37  Score=259.25  Aligned_cols=188  Identities=21%  Similarity=0.320  Sum_probs=168.1

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      |++|||||++|||+++|++|+++|++|++++|+.+++++..+++.+.. +..+.++.+|++++++++++++++.+++|++
T Consensus        22 k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~i  100 (267)
T 1vl8_A           22 RVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKY-GVETMAFRCDVSNYEEVKKLLEAVKEKFGKL  100 (267)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHH-CCCEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhc-CCeEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence            689999999999999999999999999999999888888777773332 4578899999999999999999999999999


Q ss_pred             eEEEEcCCCCC--CCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCcc-ccccccCCcccccC
Q 025509           81 NILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEG-HRLAYHEGIRFDKI  157 (251)
Q Consensus        81 d~lv~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~-~~~~~~~~~~~~~~  157 (251)
                      |+||||||+..  ++.+.+.++|++++++|+.+++.++++++|+|+++     +.++||++||.+ +..           
T Consensus       101 D~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~-----~~g~iv~isS~~~~~~-----------  164 (267)
T 1vl8_A          101 DTVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRES-----DNPSIINIGSLTVEEV-----------  164 (267)
T ss_dssp             CEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTC-----SSCEEEEECCGGGTCC-----------
T ss_pred             CEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc-----CCcEEEEECCcchhcc-----------
Confidence            99999999754  35677889999999999999999999999999774     468999999987 554           


Q ss_pred             CCCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccC
Q 025509          158 NDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  211 (251)
Q Consensus       158 ~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  211 (251)
                          +.++...|++||+++++|+++++.|+++.|  |+||+|+||+++|++...
T Consensus       165 ----~~~~~~~Y~asK~a~~~~~~~la~e~~~~g--i~v~~v~PG~v~T~~~~~  212 (267)
T 1vl8_A          165 ----TMPNISAYAASKGGVASLTKALAKEWGRYG--IRVNVIAPGWYRTKMTEA  212 (267)
T ss_dssp             ----CSSSCHHHHHHHHHHHHHHHHHHHHHGGGT--CEEEEEEECCBCSTTTHH
T ss_pred             ----CCCCChhHHHHHHHHHHHHHHHHHHhcccC--eEEEEEEeccCccccccc
Confidence                566788999999999999999999999999  999999999999998653

>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}

Probab=100.00  E-value=2.1e-38  Score=265.16  Aligned_cols=186  Identities=20%  Similarity=0.267  Sum_probs=160.0

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecC---chhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcC
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRD---IAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQH   77 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~---~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~   77 (251)
                      |++|||||++|||+++|++|+++|++|++++|+   .+.++++.+++.+.  +.++.++++|++|.++++++++++.+++
T Consensus        12 k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dv~d~~~v~~~~~~~~~~~   89 (262)
T 3ksu_A           12 KVIVIAGGIKNLGALTAKTFALESVNLVLHYHQAKDSDTANKLKDELEDQ--GAKVALYQSDLSNEEEVAKLFDFAEKEF   89 (262)
T ss_dssp             CEEEEETCSSHHHHHHHHHHTTSSCEEEEEESCGGGHHHHHHHHHHHHTT--TCEEEEEECCCCSHHHHHHHHHHHHHHH
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCCEEEEEecCccCHHHHHHHHHHHHhc--CCcEEEEECCCCCHHHHHHHHHHHHHHc
Confidence            689999999999999999999999999998765   34556666666544  5689999999999999999999999999


Q ss_pred             CCeeEEEEcCCCCC--CCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccc
Q 025509           78 HQLNILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFD  155 (251)
Q Consensus        78 g~id~lv~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~  155 (251)
                      |++|+||||||+..  ++.+.+.++|++.+++|+.+++.++++++|+|.+       .|+||++||.++..         
T Consensus        90 g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~-------~g~iv~isS~~~~~---------  153 (262)
T 3ksu_A           90 GKVDIAINTVGKVLKKPIVETSEAEFDAMDTINNKVAYFFIKQAAKHMNP-------NGHIITIATSLLAA---------  153 (262)
T ss_dssp             CSEEEEEECCCCCCSSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHTTEEE-------EEEEEEECCCHHHH---------
T ss_pred             CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhhcC-------CCEEEEEechhhcc---------
Confidence            99999999999764  3567889999999999999999999999999832       58999999988776         


Q ss_pred             cCCCCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCC
Q 025509          156 KINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRHN  212 (251)
Q Consensus       156 ~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~~  212 (251)
                            +.++...|++||+|+++|+++|+.|++++|  |+||+|+||+++|++....
T Consensus       154 ------~~~~~~~Y~asKaa~~~l~~~la~e~~~~g--i~vn~v~PG~v~T~~~~~~  202 (262)
T 3ksu_A          154 ------YTGFYSTYAGNKAPVEHYTRAASKELMKQQ--ISVNAIAPGPMDTSFFYGQ  202 (262)
T ss_dssp             ------HHCCCCC-----CHHHHHHHHHHHHTTTTT--CEEEEEEECCCCTHHHHTC
T ss_pred             ------CCCCCchhHHHHHHHHHHHHHHHHHHHHcC--cEEEEEeeCCCcCcccccc
Confidence                  566778999999999999999999999999  9999999999999987653

>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}

Probab=100.00  E-value=4.8e-37  Score=256.34  Aligned_cols=189  Identities=28%  Similarity=0.303  Sum_probs=161.3

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      |++|||||++|||+++|++|+++|++|++++|+++++++..+++     +..+.++.+|+++.++++++++++.++++++
T Consensus        10 k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i   84 (261)
T 3n74_A           10 KVALITGAGSGFGEGMAKRFAKGGAKVVIVDRDKAGAERVAGEI-----GDAALAVAADISKEADVDAAVEAALSKFGKV   84 (261)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH-----CTTEEEEECCTTSHHHHHHHHHHHHHHHSCC
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHh-----CCceEEEEecCCCHHHHHHHHHHHHHhcCCC
Confidence            68999999999999999999999999999999998888877765     5679999999999999999999999999999


Q ss_pred             eEEEEcCCCCC---CCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccccC
Q 025509           81 NILINNAGIMG---TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKI  157 (251)
Q Consensus        81 d~lv~~ag~~~---~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~  157 (251)
                      |+||||||+..   +..+.+.++|++.+++|+.+++.++++++|+|++++.. +..++||++||..+..           
T Consensus        85 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~-~~~~~iv~isS~~~~~-----------  152 (261)
T 3n74_A           85 DILVNNAGIGHKPQNAELVEPEEFDRIVGVNVRGVYLMTSKLIPHFKENGAK-GQECVILNVASTGAGR-----------  152 (261)
T ss_dssp             CEEEECCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHT-TCCEEEEEECCTTTTS-----------
T ss_pred             CEEEECCccCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCC-CCCeEEEEeCchhhcC-----------
Confidence            99999999754   24567889999999999999999999999999886321 2367899999988765           


Q ss_pred             CCCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCC
Q 025509          158 NDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRHN  212 (251)
Q Consensus       158 ~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~~  212 (251)
                          +.+.+..|+++|+|+++|+++++.|+.+.|  |+||+|+||+++|++....
T Consensus       153 ----~~~~~~~Y~asKaa~~~~~~~la~e~~~~g--i~v~~v~PG~v~t~~~~~~  201 (261)
T 3n74_A          153 ----PRPNLAWYNATKGWVVSVTKALAIELAPAK--IRVVALNPVAGETPLLTTF  201 (261)
T ss_dssp             ----CCTTCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEEC----------
T ss_pred             ----CCCCccHHHHHHHHHHHHHHHHHHHhhhcC--cEEEEEecCcccChhhhhh
Confidence                677888999999999999999999999999  9999999999999997643

>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0

Probab=100.00  E-value=4e-37  Score=258.89  Aligned_cols=185  Identities=28%  Similarity=0.352  Sum_probs=164.0

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      |++|||||++|||+++|++|+++|++|++++|+ +..++..+++.+.  +..+.++++|++|.++++++.+.+ ++++++
T Consensus        32 k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~-~~~~~~~~~~~~~--~~~~~~~~~Dv~d~~~v~~~~~~~-~~~g~i  107 (273)
T 3uf0_A           32 RTAVVTGAGSGIGRAIAHGYARAGAHVLAWGRT-DGVKEVADEIADG--GGSAEAVVADLADLEGAANVAEEL-AATRRV  107 (273)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESS-THHHHHHHHHHTT--TCEEEEEECCTTCHHHHHHHHHHH-HHHSCC
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCH-HHHHHHHHHHHhc--CCcEEEEEecCCCHHHHHHHHHHH-HhcCCC
Confidence            689999999999999999999999999999976 4566666666554  567999999999999999995544 456899


Q ss_pred             eEEEEcCCCCC--CCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccccCC
Q 025509           81 NILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKIN  158 (251)
Q Consensus        81 d~lv~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~  158 (251)
                      |+||||||+..  ++.+.+.++|++.+++|+.+++.++++++|+|+++     +.|+||++||..+..            
T Consensus       108 D~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~-----~~g~IV~isS~~~~~------------  170 (273)
T 3uf0_A          108 DVLVNNAGIIARAPAEEVSLGRWREVLTVNLDAAWVLSRSFGTAMLAH-----GSGRIVTIASMLSFQ------------  170 (273)
T ss_dssp             CEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----TCEEEEEECCGGGTS------------
T ss_pred             cEEEECCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-----CCCEEEEEcchHhcC------------
Confidence            99999999764  35678999999999999999999999999999886     468999999988876            


Q ss_pred             CCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccC
Q 025509          159 DPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  211 (251)
Q Consensus       159 ~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  211 (251)
                         +.++...|++||+|+++|+++++.|+++.|  |+||+|+||++.|++...
T Consensus       171 ---~~~~~~~Y~asKaa~~~l~~~la~e~~~~g--I~vn~v~PG~v~T~~~~~  218 (273)
T 3uf0_A          171 ---GGRNVAAYAASKHAVVGLTRALASEWAGRG--VGVNALAPGYVVTANTAA  218 (273)
T ss_dssp             ---CCSSCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECSBCSGGGHH
T ss_pred             ---CCCCChhHHHHHHHHHHHHHHHHHHHhhcC--cEEEEEEeCCCcCCchhh
Confidence               677888999999999999999999999999  999999999999998764

>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV}

Probab=100.00  E-value=3.9e-37  Score=257.18  Aligned_cols=181  Identities=20%  Similarity=0.195  Sum_probs=157.8

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      |++|||||++|||+++|++|+++|++|++++|+.+++.+..++.       .+.++.+|++++++++++++++.+++|++
T Consensus        28 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~-------~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i  100 (260)
T 3gem_A           28 APILITGASQRVGLHCALRLLEHGHRVIISYRTEHASVTELRQA-------GAVALYGDFSCETGIMAFIDLLKTQTSSL  100 (260)
T ss_dssp             CCEEESSTTSHHHHHHHHHHHHTTCCEEEEESSCCHHHHHHHHH-------TCEEEECCTTSHHHHHHHHHHHHHHCSCC
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHhc-------CCeEEECCCCCHHHHHHHHHHHHHhcCCC
Confidence            57999999999999999999999999999999987654433322       37889999999999999999999999999


Q ss_pred             eEEEEcCCCCCC-CCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccccCCC
Q 025509           81 NILINNAGIMGT-PFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKIND  159 (251)
Q Consensus        81 d~lv~~ag~~~~-~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~  159 (251)
                      |+||||||+... ..+.++++|++.+++|+.+++.++++++|+|+++     +.|+||++||..+..             
T Consensus       101 D~lv~nAg~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~-----~~g~iv~isS~~~~~-------------  162 (260)
T 3gem_A          101 RAVVHNASEWLAETPGEEADNFTRMFSVHMLAPYLINLHCEPLLTAS-----EVADIVHISDDVTRK-------------  162 (260)
T ss_dssp             SEEEECCCCCCCCCTTCHHHHHHHHHHHHTHHHHHHHHHHHHHHHTS-----SSCEEEEECCGGGGT-------------
T ss_pred             CEEEECCCccCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-----CCcEEEEECChhhcC-------------
Confidence            999999997643 3566788999999999999999999999999875     468999999988876             


Q ss_pred             CCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccC
Q 025509          160 PSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  211 (251)
Q Consensus       160 ~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  211 (251)
                        +.++...|++||+|+++|+++++.|+++ +  |+||+|+||++.|++...
T Consensus       163 --~~~~~~~Y~asKaa~~~l~~~la~e~~~-~--Irvn~v~PG~v~t~~~~~  209 (260)
T 3gem_A          163 --GSSKHIAYCATKAGLESLTLSFAARFAP-L--VKVNGIAPALLMFQPKDD  209 (260)
T ss_dssp             --CCSSCHHHHHHHHHHHHHHHHHHHHHTT-T--CEEEEEEECTTCC-----
T ss_pred             --CCCCcHhHHHHHHHHHHHHHHHHHHHCC-C--CEEEEEeecccccCCCCC
Confidence              6778889999999999999999999998 6  999999999999997653

>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}

Probab=100.00  E-value=9.5e-38  Score=264.24  Aligned_cols=188  Identities=19%  Similarity=0.248  Sum_probs=167.2

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCch-------hHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHH
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIA-------AGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEY   73 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~-------~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~   73 (251)
                      |++|||||++|||+++|++|+++|++|++++|+.+       .+++..+++.+.  +.++.++++|+++.++++++++++
T Consensus        10 k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~v~~~~~~~   87 (285)
T 3sc4_A           10 KTMFISGGSRGIGLAIAKRVAADGANVALVAKSAEPHPKLPGTIYTAAKEIEEA--GGQALPIVGDIRDGDAVAAAVAKT   87 (285)
T ss_dssp             CEEEEESCSSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHH--TSEEEEEECCTTSHHHHHHHHHHH
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCEEEEEECChhhhhhhhHHHHHHHHHHHhc--CCcEEEEECCCCCHHHHHHHHHHH
Confidence            68999999999999999999999999999999876       466666666655  568999999999999999999999


Q ss_pred             HhcCCCeeEEEEcCCCCC--CCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCC
Q 025509           74 NIQHHQLNILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEG  151 (251)
Q Consensus        74 ~~~~g~id~lv~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~  151 (251)
                      .+++|++|+||||||+..  ++.+.+.++|++++++|+.+++.++++++|+|+++     +.++||++||..+...    
T Consensus        88 ~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~-----~~g~iv~isS~~~~~~----  158 (285)
T 3sc4_A           88 VEQFGGIDICVNNASAINLGSIEEVPLKRFDLMNGIQVRGTYAVSQSCIPHMKGR-----DNPHILTLSPPIRLEP----  158 (285)
T ss_dssp             HHHHSCCSEEEECCCCCCCCCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGTTTS-----SSCEEEECCCCCCCSG----
T ss_pred             HHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-----CCcEEEEECChhhccC----
Confidence            999999999999999764  36678999999999999999999999999999875     4689999999877651    


Q ss_pred             cccccCCCCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCC-cccCCcccC
Q 025509          152 IRFDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPG-AIATNIIRH  211 (251)
Q Consensus       152 ~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg-~v~t~~~~~  211 (251)
                                .+++...|++||+|+++|+++|+.|++++|  |+||+|+|| .+.|++.+.
T Consensus       159 ----------~~~~~~~Y~asKaal~~~~~~la~e~~~~g--I~vn~v~PG~~v~t~~~~~  207 (285)
T 3sc4_A          159 ----------KWLRPTPYMMAKYGMTLCALGIAEELRDAG--IASNTLWPRTTVATAAVQN  207 (285)
T ss_dssp             ----------GGSCSHHHHHHHHHHHHHHHHHHHHTGGGT--CEEEEEECSSCBCCHHHHH
T ss_pred             ----------CCCCCchHHHHHHHHHHHHHHHHHHhcccC--cEEEEEeCCCccccHHHHh
Confidence                      225668999999999999999999999999  999999999 689988653

>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix}

Probab=100.00  E-value=5.1e-37  Score=256.29  Aligned_cols=187  Identities=20%  Similarity=0.219  Sum_probs=169.0

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      |++|||||++|||+++|++|+++|++|++++|+++++++..+++.+..++.++.++.+|++|+++++++++++.+++| +
T Consensus         8 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g-i   86 (260)
T 2z1n_A            8 KLAVVTAGSSGLGFASALELARNGARLLLFSRNREKLEAAASRIASLVSGAQVDIVAGDIREPGDIDRLFEKARDLGG-A   86 (260)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHHHHHTTC-C
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEEccCCCHHHHHHHHHHHHHhcC-C
Confidence            589999999999999999999999999999999988888877776543334789999999999999999999999998 9


Q ss_pred             eEEEEcCCCCC--CCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccccCC
Q 025509           81 NILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKIN  158 (251)
Q Consensus        81 d~lv~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~  158 (251)
                      |+||||||+..  ++.+.+.++|++.+++|+.+++.++++++|+|+++     +.++||++||..+..            
T Consensus        87 d~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~-----~~g~iv~isS~~~~~------------  149 (260)
T 2z1n_A           87 DILVYSTGGPRPGRFMELGVEDWDESYRLLARSAVWVGRRAAEQMVEK-----GWGRMVYIGSVTLLR------------  149 (260)
T ss_dssp             SEEEECCCCCCCBCGGGCCHHHHHHHHHHTHHHHHHHHHHHHHHHHHH-----TCEEEEEECCGGGTS------------
T ss_pred             CEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-----CCcEEEEECchhhcC------------
Confidence            99999999753  35577889999999999999999999999999876     468999999988765            


Q ss_pred             CCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCccc
Q 025509          159 DPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIR  210 (251)
Q Consensus       159 ~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~  210 (251)
                         +.++...|++||+++++|+++++.|+++.|  |+||+|+||+++|++..
T Consensus       150 ---~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g--i~v~~v~Pg~v~t~~~~  196 (260)
T 2z1n_A          150 ---PWQDLALSNIMRLPVIGVVRTLALELAPHG--VTVNAVLPSLILTDRVR  196 (260)
T ss_dssp             ---CCTTBHHHHHHTHHHHHHHHHHHHHHGGGT--EEEEEEEECHHHHCCCC
T ss_pred             ---CCCCCchhHHHHHHHHHHHHHHHHHHhhhC--eEEEEEEECCcccchhh
Confidence               567788999999999999999999999999  99999999999999876

>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A*

Probab=100.00  E-value=7e-37  Score=259.63  Aligned_cols=190  Identities=21%  Similarity=0.215  Sum_probs=166.9

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEe-cCchhHHHHHHHHHhhCCCCceEEEEecCCCHH---------------
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGV-RDIAAGKDVKETIVKEIPSAKVDAMELDLSSLA---------------   64 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~-r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~---------------   64 (251)
                      |++|||||++|||+++|++|+++|++|++++ |+.+.++++.+++.+.. +.++.++++|+++.+               
T Consensus        10 k~~lVTGas~GIG~aia~~la~~G~~V~~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   88 (291)
T 1e7w_A           10 PVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARR-PNSAITVQADLSNVATAPVSGADGSAPVTL   88 (291)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHS-TTCEEEEECCCSSSCBCCCC----CCCBCH
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHHhhhc-CCeeEEEEeecCCcccccccccccccccch
Confidence            5899999999999999999999999999999 99888888888776343 457999999999999               


Q ss_pred             --HHHHHHHHHHhcCCCeeEEEEcCCCCC--CCCcCC--------------chhhHHHHHHHHHHHHHHHHHHHHHHHHh
Q 025509           65 --SVRNFASEYNIQHHQLNILINNAGIMG--TPFMLS--------------KDNIELQFATNHLGHFLLTNLLLDTMKKT  126 (251)
Q Consensus        65 --~i~~~~~~~~~~~g~id~lv~~ag~~~--~~~~~~--------------~~~~~~~~~~n~~~~~~l~~~~~~~~~~~  126 (251)
                        +++++++++.+++|++|+||||||+..  ++.+.+              .++|+.++++|+.+++.++++++|+|+++
T Consensus        89 ~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~  168 (291)
T 1e7w_A           89 FTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAGT  168 (291)
T ss_dssp             HHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCCC-------------HHHHHHHHHHHHHHTHHHHHHHHHHHHHHHTS
T ss_pred             HHHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhcCccccccccccccccHHHHHHHHHHHhHHHHHHHHHHHHHHHhc
Confidence              999999999999999999999999753  355667              88999999999999999999999999875


Q ss_pred             hcc-CCCCceEEEEcCccccccccCCcccccCCCCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccc
Q 025509          127 ARK-SGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIA  205 (251)
Q Consensus       127 ~~~-~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~  205 (251)
                      +.. .+..++||++||..+..               +.++...|++||+++++|+++|+.|+++.|  |+||+|+||+++
T Consensus       169 ~~~~~~~~g~Iv~isS~~~~~---------------~~~~~~~Y~asKaa~~~l~~~la~e~~~~g--I~vn~v~PG~v~  231 (291)
T 1e7w_A          169 PAKHRGTNYSIINMVDAMTNQ---------------PLLGYTIYTMAKGALEGLTRSAALELAPLQ--IRVNGVGPGLSV  231 (291)
T ss_dssp             CGGGSCSCEEEEEECCTTTTS---------------CCTTCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEESSBC
T ss_pred             CCCCCCCCcEEEEEechhhcC---------------CCCCCchhHHHHHHHHHHHHHHHHHHHhcC--eEEEEEeeCCcc
Confidence            210 01158999999988766               677888999999999999999999999999  999999999999


Q ss_pred             CCc
Q 025509          206 TNI  208 (251)
Q Consensus       206 t~~  208 (251)
                      |++
T Consensus       232 T~~  234 (291)
T 1e7w_A          232 LVD  234 (291)
T ss_dssp             CGG
T ss_pred             CCc
Confidence            999

>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A

Probab=100.00  E-value=8e-37  Score=256.64  Aligned_cols=188  Identities=26%  Similarity=0.327  Sum_probs=164.5

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecC-chhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCC
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRD-IAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQ   79 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~-~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~   79 (251)
                      |++|||||++|||+++|++|+++|++|++++|+ .+..+...+.+.+.  +.++.++.+|+++.+++.++++++.+.+++
T Consensus        30 k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~  107 (271)
T 4iin_A           30 KNVLITGASKGIGAEIAKTLASMGLKVWINYRSNAEVADALKNELEEK--GYKAAVIKFDAASESDFIEAIQTIVQSDGG  107 (271)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT--TCCEEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhc--CCceEEEECCCCCHHHHHHHHHHHHHhcCC
Confidence            689999999999999999999999999999995 44445555555443  567999999999999999999999999999


Q ss_pred             eeEEEEcCCCCCC--CCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccccC
Q 025509           80 LNILINNAGIMGT--PFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKI  157 (251)
Q Consensus        80 id~lv~~ag~~~~--~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~  157 (251)
                      +|+||||||+..+  ..+.+.++|++.+++|+.+++.++++++|+|+++     +.++||++||..+..           
T Consensus       108 id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-----~~g~iv~isS~~~~~-----------  171 (271)
T 4iin_A          108 LSYLVNNAGVVRDKLAIKMKTEDFHHVIDNNLTSAFIGCREALKVMSKS-----RFGSVVNVASIIGER-----------  171 (271)
T ss_dssp             CCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----TCEEEEEECCHHHHH-----------
T ss_pred             CCEEEECCCcCCCcccccCCHHHHHHHHHhccHHHHHHHHHHHHHHhhc-----CCCEEEEEechhhcC-----------
Confidence            9999999997643  5577889999999999999999999999999886     468999999988876           


Q ss_pred             CCCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCC
Q 025509          158 NDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRHN  212 (251)
Q Consensus       158 ~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~~  212 (251)
                          +.++...|++||+|+++|+++++.|+.+.|  |+||+|+||++.|++.+..
T Consensus       172 ----~~~~~~~Y~asK~a~~~~~~~la~e~~~~g--i~v~~v~PG~v~T~~~~~~  220 (271)
T 4iin_A          172 ----GNMGQTNYSASKGGMIAMSKSFAYEGALRN--IRFNSVTPGFIETDMNANL  220 (271)
T ss_dssp             ----CCTTCHHHHHHHHHHHHHHHHHHHHHHTTT--EEEEEEEECSBCCC-----
T ss_pred             ----CCCCchHhHHHHHHHHHHHHHHHHHHHHhC--cEEEEEEeCcccCCchhhh
Confidence                677888999999999999999999999999  9999999999999997754

>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*

Probab=100.00  E-value=1.5e-37  Score=263.80  Aligned_cols=186  Identities=27%  Similarity=0.333  Sum_probs=164.2

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      |++|||||++|||+++|++|+++|++|++++|+.....+...+..+.. +.++.++++|++|+++++++++++.+++|++
T Consensus        48 k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i  126 (291)
T 3ijr_A           48 KNVLITGGDSGIGRAVSIAFAKEGANIAIAYLDEEGDANETKQYVEKE-GVKCVLLPGDLSDEQHCKDIVQETVRQLGSL  126 (291)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTT-TCCEEEEESCTTSHHHHHHHHHHHHHHHSSC
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhc-CCcEEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence            689999999999999999999999999999998765444333333332 5679999999999999999999999999999


Q ss_pred             eEEEEcCCCCC---CCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccccC
Q 025509           81 NILINNAGIMG---TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKI  157 (251)
Q Consensus        81 d~lv~~ag~~~---~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~  157 (251)
                      |+||||||...   ++.+.+.++|++.+++|+.+++.++++++|+|++       .++||++||..+..           
T Consensus       127 D~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~-------~g~iv~isS~~~~~-----------  188 (291)
T 3ijr_A          127 NILVNNVAQQYPQQGLEYITAEQLEKTFRINIFSYFHVTKAALSHLKQ-------GDVIINTASIVAYE-----------  188 (291)
T ss_dssp             CEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCCT-------TCEEEEECCTHHHH-----------
T ss_pred             CEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhh-------CCEEEEEechHhcC-----------
Confidence            99999999753   3556789999999999999999999999999854       57999999998876           


Q ss_pred             CCCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccC
Q 025509          158 NDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  211 (251)
Q Consensus       158 ~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  211 (251)
                          +.++...|++||+|+++|+++++.|++++|  |+||+|+||+|+|++...
T Consensus       189 ----~~~~~~~Y~asKaa~~~l~~~la~e~~~~g--i~vn~v~PG~v~T~~~~~  236 (291)
T 3ijr_A          189 ----GNETLIDYSATKGAIVAFTRSLSQSLVQKG--IRVNGVAPGPIWTPLIPS  236 (291)
T ss_dssp             ----CCTTCHHHHHHHHHHHHHHHHHHHHHGGGT--CEEEEEEECSBCSTHHHH
T ss_pred             ----CCCCChhHHHHHHHHHHHHHHHHHHHhhcC--EEEEEEeeCCCcCCcccc
Confidence                667788999999999999999999999999  999999999999998653

>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*

Probab=100.00  E-value=5.6e-37  Score=256.39  Aligned_cols=188  Identities=23%  Similarity=0.293  Sum_probs=169.1

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      |++|||||++|||+++|++|+++|++|++++|+.+++++..+++.+.. +.++.++++|++++++++++++++.++++++
T Consensus         8 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i   86 (263)
T 3ai3_A            8 KVAVITGSSSGIGLAIAEGFAKEGAHIVLVARQVDRLHEAARSLKEKF-GVRVLEVAVDVATPEGVDAVVESVRSSFGGA   86 (263)
T ss_dssp             CEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHH-CCCEEEEECCTTSHHHHHHHHHHHHHHHSSC
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHhc-CCceEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence            689999999999999999999999999999999888888777775542 3468899999999999999999999999999


Q ss_pred             eEEEEcCCCCC--CCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccccCC
Q 025509           81 NILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKIN  158 (251)
Q Consensus        81 d~lv~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~  158 (251)
                      |+||||||...  ++.+.+.++|++.+++|+.+++.++++++|+|+++     +.++||++||..+..            
T Consensus        87 d~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-----~~g~iv~isS~~~~~------------  149 (263)
T 3ai3_A           87 DILVNNAGTGSNETIMEAADEKWQFYWELLVMAAVRLARGLVPGMRAR-----GGGAIIHNASICAVQ------------  149 (263)
T ss_dssp             SEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----TCEEEEEECCGGGTS------------
T ss_pred             CEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-----CCcEEEEECchhhcC------------
Confidence            99999999753  35677899999999999999999999999999876     468999999988765            


Q ss_pred             CCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccC
Q 025509          159 DPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  211 (251)
Q Consensus       159 ~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  211 (251)
                         +.++...|++||+++++|+++++.|+++.|  |+||+|+||+++|++...
T Consensus       150 ---~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g--i~v~~v~Pg~v~t~~~~~  197 (263)
T 3ai3_A          150 ---PLWYEPIYNVTKAALMMFSKTLATEVIKDN--IRVNCINPGLILTPDWIK  197 (263)
T ss_dssp             ---CCTTCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECCBCCHHHHH
T ss_pred             ---CCCCcchHHHHHHHHHHHHHHHHHHhhhcC--cEEEEEecCcccCcchhh
Confidence               566778999999999999999999999989  999999999999998653

>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A*

Probab=100.00  E-value=6.8e-37  Score=255.47  Aligned_cols=186  Identities=25%  Similarity=0.303  Sum_probs=168.6

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      |++|||||++|||+++|++|+++|++|++++|+.+++++..+++.+.  +..+.++.+|+++.++++++++++.+.+|++
T Consensus        15 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i   92 (260)
T 2zat_A           15 KVALVTASTDGIGLAIARRLAQDGAHVVVSSRKQENVDRTVATLQGE--GLSVTGTVCHVGKAEDRERLVAMAVNLHGGV   92 (260)
T ss_dssp             CEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT--TCCEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCceEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            58999999999999999999999999999999988888877777654  4578899999999999999999999999999


Q ss_pred             eEEEEcCCCCC---CCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccccC
Q 025509           81 NILINNAGIMG---TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKI  157 (251)
Q Consensus        81 d~lv~~ag~~~---~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~  157 (251)
                      |+||||||...   ++.+.+.++|++.+++|+.+++.++++++|+|+++     +.++||++||..+..           
T Consensus        93 D~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~-----~~g~iv~isS~~~~~-----------  156 (260)
T 2zat_A           93 DILVSNAAVNPFFGNIIDATEEVWDKILHVNVKATVLMTKAVVPEMEKR-----GGGSVLIVSSVGAYH-----------  156 (260)
T ss_dssp             CEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT-----TCEEEEEECCGGGTS-----------
T ss_pred             CEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-----CCCEEEEEechhhcC-----------
Confidence            99999999753   35677889999999999999999999999999875     468999999988765           


Q ss_pred             CCCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCccc
Q 025509          158 NDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIR  210 (251)
Q Consensus       158 ~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~  210 (251)
                          +.++...|+++|+++++|+++++.|+++.|  |+||+|+||++.|++..
T Consensus       157 ----~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g--i~v~~v~Pg~v~t~~~~  203 (260)
T 2zat_A          157 ----PFPNLGPYNVSKTALLGLTKNLAVELAPRN--IRVNCLAPGLIKTNFSQ  203 (260)
T ss_dssp             ----CCTTBHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECSBCSSTTH
T ss_pred             ----CCCCchhHHHHHHHHHHHHHHHHHHhcccC--eEEEEEEECcccCccch
Confidence                667788999999999999999999999999  99999999999999865

>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}

Probab=100.00  E-value=2.7e-37  Score=257.96  Aligned_cols=186  Identities=27%  Similarity=0.271  Sum_probs=160.3

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEE-ecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCC
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMG-VRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQ   79 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~-~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~   79 (251)
                      |++|||||++|||+++|++|+++|++|+++ +|+.+..++..+++.+.  +.++.++++|++|.++++++++++.+++|+
T Consensus         9 k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   86 (259)
T 3edm_A            9 RTIVVAGAGRDIGRACAIRFAQEGANVVLTYNGAAEGAATAVAEIEKL--GRSALAIKADLTNAAEVEAAISAAADKFGE   86 (259)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSSCHHHHHHHHHHHTT--TSCCEEEECCTTCHHHHHHHHHHHHHHHCS
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhc--CCceEEEEcCCCCHHHHHHHHHHHHHHhCC
Confidence            689999999999999999999999999998 56777777777777554  567899999999999999999999999999


Q ss_pred             eeEEEEcCCCC---CCCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCccccc
Q 025509           80 LNILINNAGIM---GTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDK  156 (251)
Q Consensus        80 id~lv~~ag~~---~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~  156 (251)
                      +|+||||||..   .++.+.+.++|++.+++|+.|++.++++++|+|++       .|+||++||..+...         
T Consensus        87 id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~-------~g~iv~isS~~~~~~---------  150 (259)
T 3edm_A           87 IHGLVHVAGGLIARKTIAEMDEAFWHQVLDVNLTSLFLTAKTALPKMAK-------GGAIVTFSSQAGRDG---------  150 (259)
T ss_dssp             EEEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE-------EEEEEEECCHHHHHC---------
T ss_pred             CCEEEECCCccCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhc-------CCEEEEEcCHHhccC---------
Confidence            99999999965   23667889999999999999999999999999854       479999999887621         


Q ss_pred             CCCCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCC
Q 025509          157 INDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRHN  212 (251)
Q Consensus       157 ~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~~  212 (251)
                           +.++...|++||+|+++|+++++.|+++ +  |+||+|+||+++|++....
T Consensus       151 -----~~~~~~~Y~asKaa~~~l~~~la~e~~~-~--I~vn~v~PG~v~T~~~~~~  198 (259)
T 3edm_A          151 -----GGPGALAYATSKGAVMTFTRGLAKEVGP-K--IRVNAVCPGMISTTFHDTF  198 (259)
T ss_dssp             -----CSTTCHHHHHHHHHHHHHHHHHHHHHTT-T--CEEEEEEECCBCC------
T ss_pred             -----CCCCcHHHHHHHHHHHHHHHHHHHHHCC-C--CEEEEEEECCCcCcccccc
Confidence                 5677889999999999999999999987 3  9999999999999997754

>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A*

Probab=100.00  E-value=4e-37  Score=256.20  Aligned_cols=184  Identities=26%  Similarity=0.295  Sum_probs=165.4

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      |++|||||++|||+++|++|+++|++|++++|+.+++++..+++     +..+.++.+|+++.++++++++++.+++|++
T Consensus         6 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i   80 (254)
T 1hdc_A            6 KTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATAREL-----GDAARYQHLDVTIEEDWQRVVAYAREEFGSV   80 (254)
T ss_dssp             SEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTT-----GGGEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-----CCceeEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence            68999999999999999999999999999999987776655443     3568899999999999999999999999999


Q ss_pred             eEEEEcCCCCC--CCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccccCC
Q 025509           81 NILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKIN  158 (251)
Q Consensus        81 d~lv~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~  158 (251)
                      |+||||||+..  ++.+.+.++|++.+++|+.+++.++++++|+|+++     +.++||++||.++..            
T Consensus        81 D~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~-----~~g~iv~isS~~~~~------------  143 (254)
T 1hdc_A           81 DGLVNNAGISTGMFLETESVERFRKVVEINLTGVFIGMKTVIPAMKDA-----GGGSIVNISSAAGLM------------  143 (254)
T ss_dssp             CEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----TCEEEEEECCGGGTS------------
T ss_pred             CEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc-----CCCEEEEECchhhcc------------
Confidence            99999999754  35577889999999999999999999999999886     468999999988765            


Q ss_pred             CCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccC
Q 025509          159 DPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  211 (251)
Q Consensus       159 ~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  211 (251)
                         +.++...|++||+++++|+++++.|+.+.|  |+||+|+||+++|++...
T Consensus       144 ---~~~~~~~Y~asK~a~~~~~~~la~e~~~~g--i~v~~v~Pg~v~t~~~~~  191 (254)
T 1hdc_A          144 ---GLALTSSYGASKWGVRGLSKLAAVELGTDR--IRVNSVHPGMTYTPMTAE  191 (254)
T ss_dssp             ---CCTTCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECSBCCHHHHH
T ss_pred             ---CCCCchhHHHHHHHHHHHHHHHHHHhhhcC--eEEEEEecccCcCccccc
Confidence               567788999999999999999999999999  999999999999998653

>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*

Probab=100.00  E-value=9.5e-37  Score=259.42  Aligned_cols=186  Identities=17%  Similarity=0.145  Sum_probs=164.2

Q ss_pred             CEEEEECCCC--hhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCC
Q 025509            1 MDIVITGATS--GIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHH   78 (251)
Q Consensus         1 k~vlItG~s~--gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g   78 (251)
                      |++|||||++  |||+++|++|+++|++|++++|+.+..+...+.. +..  ..+.++++|++|.++++++++++.+++|
T Consensus        31 k~vlVTGasg~~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~-~~~--~~~~~~~~Dv~d~~~v~~~~~~~~~~~g  107 (296)
T 3k31_A           31 KKGVIIGVANDKSLAWGIAKAVCAQGAEVALTYLSETFKKRVDPLA-ESL--GVKLTVPCDVSDAESVDNMFKVLAEEWG  107 (296)
T ss_dssp             CEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHH-HHH--TCCEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CEEEEEeCCCCCCHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHH-Hhc--CCeEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            6899999996  9999999999999999999999976554444433 332  2468899999999999999999999999


Q ss_pred             CeeEEEEcCCCC------CCCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCc
Q 025509           79 QLNILINNAGIM------GTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGI  152 (251)
Q Consensus        79 ~id~lv~~ag~~------~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~  152 (251)
                      ++|+||||||+.      .++.+.+.++|++.+++|+.+++.++++++|+|++       .|+||++||.++..      
T Consensus       108 ~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~-------~g~IV~isS~~~~~------  174 (296)
T 3k31_A          108 SLDFVVHAVAFSDKNELKGRYVDTSLGNFLTSMHISCYSFTYIASKAEPLMTN-------GGSILTLSYYGAEK------  174 (296)
T ss_dssp             CCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTT-------CEEEEEEECGGGTS------
T ss_pred             CCCEEEECCCcCCcccccCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhc-------CCEEEEEEehhhcc------
Confidence            999999999976      34567889999999999999999999999998854       58999999988776      


Q ss_pred             ccccCCCCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCCc
Q 025509          153 RFDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRHNS  213 (251)
Q Consensus       153 ~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~~~  213 (251)
                               +.+++..|++||+|+++|+++++.|++++|  |+||+|+||+|+|++.....
T Consensus       175 ---------~~~~~~~Y~asKaal~~l~~~la~e~~~~g--Irvn~v~PG~v~T~~~~~~~  224 (296)
T 3k31_A          175 ---------VVPHYNVMGVCKAALEASVKYLAVDLGKQQ--IRVNAISAGPVRTLASSGIS  224 (296)
T ss_dssp             ---------CCTTTTHHHHHHHHHHHHHHHHHHHHHTTT--EEEEEEEECCCCCSSCCSCH
T ss_pred             ---------CCCCchhhHHHHHHHHHHHHHHHHHHhhcC--cEEEEEEECCCcCchhhccc
Confidence                     677888999999999999999999999999  99999999999999977643

>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0

Probab=100.00  E-value=6e-37  Score=253.67  Aligned_cols=188  Identities=29%  Similarity=0.368  Sum_probs=168.6

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecC--CCHHHHHHHHHHHHhcCC
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDL--SSLASVRNFASEYNIQHH   78 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~--~~~~~i~~~~~~~~~~~g   78 (251)
                      |++|||||++|||+++|++|+++|++|++++|+..++++..+++.+.. ...+.++.+|+  ++.++++++++++.+.++
T Consensus        15 k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~d~d~~~~~~~~~~~~~~~~~~g   93 (247)
T 3i1j_A           15 RVILVTGAARGIGAAAARAYAAHGASVVLLGRTEASLAEVSDQIKSAG-QPQPLIIALNLENATAQQYRELAARVEHEFG   93 (247)
T ss_dssp             CEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT-SCCCEEEECCTTTCCHHHHHHHHHHHHHHHS
T ss_pred             CEEEEeCCCChHHHHHHHHHHHCCCEEEEEecCHHHHHHHHHHHHhcC-CCCceEEEeccccCCHHHHHHHHHHHHHhCC
Confidence            689999999999999999999999999999999999999888887653 34567777777  999999999999999999


Q ss_pred             CeeEEEEcCCCCC---CCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccc
Q 025509           79 QLNILINNAGIMG---TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFD  155 (251)
Q Consensus        79 ~id~lv~~ag~~~---~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~  155 (251)
                      ++|+||||||+..   ++.+.+.++|++.+++|+.+++.++++++|+|+++     +.++||++||..+..         
T Consensus        94 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-----~~~~iv~isS~~~~~---------  159 (247)
T 3i1j_A           94 RLDGLLHNASIIGPRTPLEQLPDEDFMQVMHVNVNATFMLTRALLPLLKRS-----EDASIAFTSSSVGRK---------  159 (247)
T ss_dssp             CCSEEEECCCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTS-----SSEEEEEECCGGGTS---------
T ss_pred             CCCEEEECCccCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhC-----CCCeEEEEcchhhcC---------
Confidence            9999999999753   35677899999999999999999999999999775     468999999988776         


Q ss_pred             cCCCCCCCCcccccchhHHHHHHHHHHHHHHhcc-CCCcEEEEEeeCCcccCCcccC
Q 025509          156 KINDPSGYNGFRAYSQSKLANILHANELARRLKE-DGVDITANSVHPGAIATNIIRH  211 (251)
Q Consensus       156 ~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~-~g~~i~v~~v~Pg~v~t~~~~~  211 (251)
                            +.+++..|++||+|+++|+++|+.|+.+ .|  |+||+|+||+++|++...
T Consensus       160 ------~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~--i~v~~v~PG~v~t~~~~~  208 (247)
T 3i1j_A          160 ------GRANWGAYGVSKFATEGLMQTLADELEGVTA--VRANSINPGATRTGMRAQ  208 (247)
T ss_dssp             ------CCTTCHHHHHHHHHHHHHHHHHHHHHTTTSS--EEEEEEECCCCSSHHHHH
T ss_pred             ------CCCCcchhHHHHHHHHHHHHHHHHHhcCCCC--eEEEEEecCcccCccchh
Confidence                  6778889999999999999999999976 68  999999999999998653

>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa}

Probab=100.00  E-value=9.6e-37  Score=256.95  Aligned_cols=190  Identities=27%  Similarity=0.313  Sum_probs=166.6

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      |++|||||++|||+++|++|+++|++|++++|+.+.+++..+++.+.  + ++.++.+|++|+++++++++++.+.++++
T Consensus        30 k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~--~-~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i  106 (276)
T 2b4q_A           30 RIALVTGGSRGIGQMIAQGLLEAGARVFICARDAEACADTATRLSAY--G-DCQAIPADLSSEAGARRLAQALGELSARL  106 (276)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHTTS--S-CEEECCCCTTSHHHHHHHHHHHHHHCSCC
T ss_pred             CEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--C-ceEEEEeeCCCHHHHHHHHHHHHHhcCCC
Confidence            58999999999999999999999999999999988887777766432  2 68889999999999999999999999999


Q ss_pred             eEEEEcCCCCC--CCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccccCC
Q 025509           81 NILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKIN  158 (251)
Q Consensus        81 d~lv~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~  158 (251)
                      |+||||||+..  ++.+.+.++|++.+++|+.+++.++++++|.|++++.. .+.++||++||.++..            
T Consensus       107 D~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~-~~~g~iV~isS~~~~~------------  173 (276)
T 2b4q_A          107 DILVNNAGTSWGAALESYPVSGWEKVMQLNVTSVFSCIQQLLPLLRRSASA-ENPARVINIGSVAGIS------------  173 (276)
T ss_dssp             SEEEECCCCCCCCCTTSCCSHHHHHHHHHHTHHHHHHHHHHHHHHHHHCCS-SSCEEEEEECCGGGTC------------
T ss_pred             CEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCC-CCCCEEEEECCHHHcC------------
Confidence            99999999753  35678899999999999999999999999999876210 0128999999988765            


Q ss_pred             CCCCCCccc-ccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccC
Q 025509          159 DPSGYNGFR-AYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  211 (251)
Q Consensus       159 ~~~~~~~~~-~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  211 (251)
                         +.+... .|++||+++++|+++++.|+.+.|  |+||+|+||+++|++...
T Consensus       174 ---~~~~~~~~Y~asK~a~~~~~~~la~e~~~~g--I~vn~v~PG~v~T~~~~~  222 (276)
T 2b4q_A          174 ---AMGEQAYAYGPSKAALHQLSRMLAKELVGEH--INVNVIAPGRFPSRMTRH  222 (276)
T ss_dssp             ---CCCCSCTTHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECCCCSTTTHH
T ss_pred             ---CCCCCccccHHHHHHHHHHHHHHHHHhcccC--eEEEEEEeccCcCcchhh
Confidence               455666 899999999999999999999989  999999999999998653

>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa}

Probab=100.00  E-value=2.8e-37  Score=259.68  Aligned_cols=185  Identities=25%  Similarity=0.316  Sum_probs=163.0

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      |++|||||++|||+++|++|+++|++|++++|+.+++++..+++.+.   ..+.++.+|++|.++++++++++.+++|++
T Consensus        22 k~vlVTGas~gIG~aia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~---~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i   98 (272)
T 2nwq_A           22 STLFITGATSGFGEACARRFAEAGWSLVLTGRREERLQALAGELSAK---TRVLPLTLDVRDRAAMSAAVDNLPEEFATL   98 (272)
T ss_dssp             CEEEESSTTTSSHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTT---SCEEEEECCTTCHHHHHHHHHTCCGGGSSC
T ss_pred             cEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhcC---CcEEEEEcCCCCHHHHHHHHHHHHHHhCCC
Confidence            68999999999999999999999999999999988888777666332   468899999999999999999998899999


Q ss_pred             eEEEEcCCCCC---CCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCc-eEEEEcCccccccccCCccccc
Q 025509           81 NILINNAGIMG---TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEG-RIINVSSEGHRLAYHEGIRFDK  156 (251)
Q Consensus        81 d~lv~~ag~~~---~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g-~iv~vsS~~~~~~~~~~~~~~~  156 (251)
                      |+||||||+..   ++.+.+.++|++.+++|+.+++.++++++|+|+++     +.| +||++||..+..          
T Consensus        99 D~lvnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~-----~~g~~IV~isS~~~~~----------  163 (272)
T 2nwq_A           99 RGLINNAGLALGTDPAQSCDLDDWDTMVDTNIKGLLYSTRLLLPRLIAH-----GAGASIVNLGSVAGKW----------  163 (272)
T ss_dssp             CEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----CTTCEEEEECCGGGTS----------
T ss_pred             CEEEECCCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-----CCCcEEEEeCCchhcc----------
Confidence            99999999753   35677889999999999999999999999999876     457 999999988765          


Q ss_pred             CCCCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCccc
Q 025509          157 INDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIR  210 (251)
Q Consensus       157 ~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~  210 (251)
                           +.++...|+++|+++++|+++++.|+++.|  |+||+|+||+++|++..
T Consensus       164 -----~~~~~~~Y~asKaa~~~l~~~la~el~~~g--Irvn~v~PG~v~T~~~~  210 (272)
T 2nwq_A          164 -----PYPGSHVYGGTKAFVEQFSLNLRCDLQGTG--VRVTNLEPGLCESEFSL  210 (272)
T ss_dssp             -----CCTTCHHHHHHHHHHHHHHHHHHTTCTTSC--CEEEEEEECSBC-----
T ss_pred             -----CCCCCchHHHHHHHHHHHHHHHHHHhCccC--eEEEEEEcCCCcCcchh
Confidence                 567778999999999999999999999999  99999999999999865

>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*

Probab=100.00  E-value=2.1e-36  Score=248.73  Aligned_cols=187  Identities=24%  Similarity=0.297  Sum_probs=165.7

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      |++|||||++|||+++|++|+++|++|++++|+.+++++..+++.+.. +.++.++++|++++++++++++++.++++++
T Consensus         3 k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~i   81 (235)
T 3l77_A            3 KVAVITGASRGIGEAIARALARDGYALALGARSVDRLEKIAHELMQEQ-GVEVFYHHLDVSKAESVEEFSKKVLERFGDV   81 (235)
T ss_dssp             CEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHH-CCCEEEEECCTTCHHHHHHHCC-HHHHHSSC
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhc-CCeEEEEEeccCCHHHHHHHHHHHHHhcCCC
Confidence            689999999999999999999999999999999999998888886443 5679999999999999999999999999999


Q ss_pred             eEEEEcCCCCC--CCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccccCC
Q 025509           81 NILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKIN  158 (251)
Q Consensus        81 d~lv~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~  158 (251)
                      |+||||||+..  ++.+.+.++|++.+++|+.+++.++++++|+|.+.      .+++|+++|..+..            
T Consensus        82 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~------~~~ii~~sS~~~~~------------  143 (235)
T 3l77_A           82 DVVVANAGLGYFKRLEELSEEEFHEMIEVNLLGVWRTLKAFLDSLKRT------GGLALVTTSDVSAR------------  143 (235)
T ss_dssp             SEEEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH------TCEEEEECCGGGSS------------
T ss_pred             CEEEECCccccccCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhc------CCcEEEEecchhcc------------
Confidence            99999999763  36678999999999999999999999999999553      68999999987765            


Q ss_pred             CCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCCc
Q 025509          159 DPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRHNS  213 (251)
Q Consensus       159 ~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~~~  213 (251)
                         +.+....|+++|+|+++|+++++  +.+.|  |+||+|+||+++|++.....
T Consensus       144 ---~~~~~~~Y~~sKaa~~~~~~~l~--~~~~~--i~v~~v~PG~v~T~~~~~~~  191 (235)
T 3l77_A          144 ---LIPYGGGYVSTKWAARALVRTFQ--IENPD--VRFFELRPGAVDTYFGGSKP  191 (235)
T ss_dssp             ---CCTTCHHHHHHHHHHHHHHHHHH--HHCTT--SEEEEEEECSBSSSTTTCCS
T ss_pred             ---cCCCcchHHHHHHHHHHHHHHHh--hcCCC--eEEEEEeCCccccccccccC
Confidence               56677899999999999999994  44567  99999999999999987543

>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A*

Probab=100.00  E-value=1e-36  Score=254.55  Aligned_cols=183  Identities=26%  Similarity=0.355  Sum_probs=164.9

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      |++|||||++|||+++|++|+++|++|++++|+.+++++..+++     ...+.++++|++++++++++++++.+++|++
T Consensus         8 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~i   82 (260)
T 1nff_A            8 KVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAEL-----ADAARYVHLDVTQPAQWKAAVDTAVTAFGGL   82 (260)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHT-----GGGEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-----hcCceEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence            57999999999999999999999999999999987777665554     2348889999999999999999999999999


Q ss_pred             eEEEEcCCCCC--CCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccccCC
Q 025509           81 NILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKIN  158 (251)
Q Consensus        81 d~lv~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~  158 (251)
                      |+||||||+..  ++.+.+.++|++.+++|+.+++.++++++|+|+++     +.++||++||.++..            
T Consensus        83 D~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~-----~~g~iv~isS~~~~~------------  145 (260)
T 1nff_A           83 HVLVNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEA-----GRGSIINISSIEGLA------------  145 (260)
T ss_dssp             CEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----TCEEEEEECCGGGTS------------
T ss_pred             CEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-----CCCEEEEEeehhhcC------------
Confidence            99999999754  35677889999999999999999999999999886     468999999988765            


Q ss_pred             CCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCccc
Q 025509          159 DPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIR  210 (251)
Q Consensus       159 ~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~  210 (251)
                         +.++...|++||+++++|+++++.|+++.|  |+||+|+||++.|++..
T Consensus       146 ---~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g--i~v~~v~Pg~v~t~~~~  192 (260)
T 1nff_A          146 ---GTVACHGYTATKFAVRGLTKSTALELGPSG--IRVNSIHPGLVKTPMTD  192 (260)
T ss_dssp             ---CCTTBHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECCBCSGGGT
T ss_pred             ---CCCCchhHHHHHHHHHHHHHHHHHHhCccC--cEEEEEEeCCCCCCccc
Confidence               566778999999999999999999999989  99999999999999865

>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=100.00  E-value=8.5e-37  Score=252.92  Aligned_cols=181  Identities=25%  Similarity=0.337  Sum_probs=161.9

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      |++|||||++|||+++|++|+++|++|++++|+.+++++..+++       .+.++.+|++|+++++++++++.+++|++
T Consensus         6 k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~-------~~~~~~~D~~~~~~~~~~~~~~~~~~g~i   78 (245)
T 1uls_A            6 KAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAV-------GAHPVVMDVADPASVERGFAEALAHLGRL   78 (245)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTT-------TCEEEECCTTCHHHHHHHHHHHHHHHSSC
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc-------CCEEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence            68999999999999999999999999999999987766554322       27889999999999999999999999999


Q ss_pred             eEEEEcCCCCC--CCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccccCC
Q 025509           81 NILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKIN  158 (251)
Q Consensus        81 d~lv~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~  158 (251)
                      |+||||||+..  ++.+.+.++|++.+++|+.+++.++++++|+|+++     +.++||++||.+ ..            
T Consensus        79 d~lvn~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~-----~~g~iv~isS~~-~~------------  140 (245)
T 1uls_A           79 DGVVHYAGITRDNFHWKMPLEDWELVLRVNLTGSFLVAKAASEAMREK-----NPGSIVLTASRV-YL------------  140 (245)
T ss_dssp             CEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTT-----CCEEEEEECCGG-GG------------
T ss_pred             CEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-----CCCEEEEEccch-hc------------
Confidence            99999999753  35677889999999999999999999999999875     468999999987 54            


Q ss_pred             CCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccC
Q 025509          159 DPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  211 (251)
Q Consensus       159 ~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  211 (251)
                         +.+++..|+++|+++++|+++++.|+.+.|  |+||+|+||+++|++...
T Consensus       141 ---~~~~~~~Y~asK~a~~~~~~~la~e~~~~g--i~v~~v~PG~v~t~~~~~  188 (245)
T 1uls_A          141 ---GNLGQANYAASMAGVVGLTRTLALELGRWG--IRVNTLAPGFIETRMTAK  188 (245)
T ss_dssp             ---CCTTCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECSBCCTTTSS
T ss_pred             ---CCCCchhHHHHHHHHHHHHHHHHHHHhHhC--eEEEEEEeCcCcCcchhh
Confidence               566778999999999999999999999999  999999999999999764

>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis}

Probab=100.00  E-value=2.6e-36  Score=254.62  Aligned_cols=184  Identities=29%  Similarity=0.398  Sum_probs=167.6

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      |++|||||++|||+++|++|+++|++|++++|+.+++++..+++     +..+.++++|+++.++++++++++.++++++
T Consensus         6 k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~i   80 (281)
T 3m1a_A            6 KVWLVTGASSGFGRAIAEAAVAAGDTVIGTARRTEALDDLVAAY-----PDRAEAISLDVTDGERIDVVAADVLARYGRV   80 (281)
T ss_dssp             CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHC-----TTTEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             cEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhc-----cCCceEEEeeCCCHHHHHHHHHHHHHhCCCC
Confidence            68999999999999999999999999999999988877665543     4579999999999999999999999999999


Q ss_pred             eEEEEcCCCC--CCCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccccCC
Q 025509           81 NILINNAGIM--GTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKIN  158 (251)
Q Consensus        81 d~lv~~ag~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~  158 (251)
                      |+||||||..  .++.+.+.++|++.+++|+.|++.++++++|+|+++     +.++||++||..+..            
T Consensus        81 d~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~-----~~~~iv~~sS~~~~~------------  143 (281)
T 3m1a_A           81 DVLVNNAGRTQVGAFEETTERELRDLFELHVFGPARLTRALLPQMRER-----GSGSVVNISSFGGQL------------  143 (281)
T ss_dssp             SEEEECCCCEEECCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----TCEEEEEECCGGGTC------------
T ss_pred             CEEEECCCcCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-----CCCEEEEEcCccccC------------
Confidence            9999999975  346678899999999999999999999999999886     468999999988776            


Q ss_pred             CCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccC
Q 025509          159 DPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  211 (251)
Q Consensus       159 ~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  211 (251)
                         +.++..+|++||+++++|+++++.|+++.|  |+|++|+||++.|++...
T Consensus       144 ---~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g--i~v~~v~Pg~v~t~~~~~  191 (281)
T 3m1a_A          144 ---SFAGFSAYSATKAALEQLSEGLADEVAPFG--IKVLIVEPGAFRTNLFGK  191 (281)
T ss_dssp             ---CCTTCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECCBCCTTTCC
T ss_pred             ---CCCCchHHHHHHHHHHHHHHHHHHHhhccC--cEEEEEecCccccccccc
Confidence               677888999999999999999999999999  999999999999999764

>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*

Probab=100.00  E-value=2.5e-36  Score=256.48  Aligned_cols=186  Identities=17%  Similarity=0.153  Sum_probs=159.4

Q ss_pred             CEEEEECCC--ChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCC
Q 025509            1 MDIVITGAT--SGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHH   78 (251)
Q Consensus         1 k~vlItG~s--~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g   78 (251)
                      |++|||||+  +|||+++|++|+++|++|++++|++.. .+..+++.+..  ..+.++++|++|.++++++++++.+++|
T Consensus        32 k~~lVTGasg~~GIG~aia~~la~~G~~V~~~~r~~~~-~~~~~~~~~~~--~~~~~~~~Dv~d~~~v~~~~~~~~~~~g  108 (293)
T 3grk_A           32 KRGLILGVANNRSIAWGIAKAAREAGAELAFTYQGDAL-KKRVEPLAEEL--GAFVAGHCDVADAASIDAVFETLEKKWG  108 (293)
T ss_dssp             CEEEEECCCSSSSHHHHHHHHHHHTTCEEEEEECSHHH-HHHHHHHHHHH--TCEEEEECCTTCHHHHHHHHHHHHHHTS
T ss_pred             CEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEEcCCHHH-HHHHHHHHHhc--CCceEEECCCCCHHHHHHHHHHHHHhcC
Confidence            689999999  559999999999999999999998543 33444444443  3588999999999999999999999999


Q ss_pred             CeeEEEEcCCCCC------CCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCc
Q 025509           79 QLNILINNAGIMG------TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGI  152 (251)
Q Consensus        79 ~id~lv~~ag~~~------~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~  152 (251)
                      ++|+||||||+..      ++.+.++++|++.+++|+.+++.++++++|+|++       .|+||++||.++..      
T Consensus       109 ~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~-------~g~Iv~isS~~~~~------  175 (293)
T 3grk_A          109 KLDFLVHAIGFSDKDELTGRYIDTSEANFTNTMLISVYSLTAVSRRAEKLMAD-------GGSILTLTYYGAEK------  175 (293)
T ss_dssp             CCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTTT-------CEEEEEEECGGGTS------
T ss_pred             CCCEEEECCccCCcccccccccccCHHHHHHHHHHHHHHHHHHHHHHHHhccC-------CCEEEEEeehhhcc------
Confidence            9999999999763      4567889999999999999999999999999864       58999999988776      


Q ss_pred             ccccCCCCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCCc
Q 025509          153 RFDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRHNS  213 (251)
Q Consensus       153 ~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~~~  213 (251)
                               +.+++..|++||+|+++|+++++.|++++|  |+||+|+||+++|++.....
T Consensus       176 ---------~~~~~~~Y~asKaa~~~l~~~la~e~~~~g--I~vn~v~PG~v~T~~~~~~~  225 (293)
T 3grk_A          176 ---------VMPNYNVMGVAKAALEASVKYLAVDLGPQN--IRVNAISAGPIKTLAASGIG  225 (293)
T ss_dssp             ---------BCTTTTHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECCCCC------C
T ss_pred             ---------CCCchHHHHHHHHHHHHHHHHHHHHHhHhC--CEEEEEecCCCcchhhhccc
Confidence                     677888999999999999999999999999  99999999999999977543

>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=100.00  E-value=1.1e-36  Score=256.87  Aligned_cols=186  Identities=24%  Similarity=0.278  Sum_probs=167.3

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCC---ceEEEEecCCCHHHHHHHHHHHHhcC
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSA---KVDAMELDLSSLASVRNFASEYNIQH   77 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~---~v~~~~~D~~~~~~i~~~~~~~~~~~   77 (251)
                      |++|||||++|||+++|++|+++|++|++++|+.+++++..+++.+.  +.   .+.++.+|++|+++++++++++.+++
T Consensus         7 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   84 (280)
T 1xkq_A            7 KTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKS--GVSEKQVNSVVADVTTEDGQDQIINSTLKQF   84 (280)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTT--TCCGGGEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHc--CCCCcceEEEEecCCCHHHHHHHHHHHHHhc
Confidence            68999999999999999999999999999999998888887777553  23   78999999999999999999999999


Q ss_pred             CCeeEEEEcCCCCCC------CCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCC
Q 025509           78 HQLNILINNAGIMGT------PFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEG  151 (251)
Q Consensus        78 g~id~lv~~ag~~~~------~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~  151 (251)
                      |++|+||||||+...      +.+.+.++|++.+++|+.+++.++++++|+|+++      +++||++||..+..     
T Consensus        85 g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~------~g~iv~isS~~~~~-----  153 (280)
T 1xkq_A           85 GKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQAVIEMTKKVKPHLVAS------KGEIVNVSSIVAGP-----  153 (280)
T ss_dssp             SCCCEEEECCCCCCCCTTCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH------TCEEEEECCGGGSS-----
T ss_pred             CCCCEEEECCCCCCCCCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHhhcC------CCcEEEecCccccC-----
Confidence            999999999997532      4567889999999999999999999999999875      38999999987765     


Q ss_pred             cccccCCCCCCC-CcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccC
Q 025509          152 IRFDKINDPSGY-NGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  211 (251)
Q Consensus       152 ~~~~~~~~~~~~-~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  211 (251)
                                +. ++...|++||+++++|+++++.|+++.|  |+||+|+||+++|++...
T Consensus       154 ----------~~~~~~~~Y~asK~a~~~~~~~la~e~~~~g--i~v~~v~PG~v~t~~~~~  202 (280)
T 1xkq_A          154 ----------QAQPDFLYYAIAKAALDQYTRSTAIDLAKFG--IRVNSVSPGMVETGFTNA  202 (280)
T ss_dssp             ----------SCCCSSHHHHHHHHHHHHHHHHHHHHHHTTT--CEEEEEEECCBCSSHHHH
T ss_pred             ----------CCCCcccHHHHHHHHHHHHHHHHHHHhccCC--eEEEEEeeCcCcCCcccc
Confidence                      44 6778999999999999999999999999  999999999999998764

>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0

Probab=100.00  E-value=2e-37  Score=261.92  Aligned_cols=196  Identities=20%  Similarity=0.201  Sum_probs=166.2

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecC------------chhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHH
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRD------------IAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRN   68 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~------------~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~   68 (251)
                      |++|||||++|||+++|++|+++|++|++++|+            .+.+++...++.+.  +.++.++++|+++.+++++
T Consensus        11 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~v~~   88 (287)
T 3pxx_A           11 KVVLVTGGARGQGRSHAVKLAEEGADIILFDICHDIETNEYPLATSRDLEEAGLEVEKT--GRKAYTAEVDVRDRAAVSR   88 (287)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHT--TSCEEEEECCTTCHHHHHH
T ss_pred             CEEEEeCCCChHHHHHHHHHHHCCCeEEEEcccccccccccchhhhHHHHHHHHHHHhc--CCceEEEEccCCCHHHHHH
Confidence            689999999999999999999999999999997            55666666666544  5679999999999999999


Q ss_pred             HHHHHHhcCCCeeEEEEcCCCCCCCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccc
Q 025509           69 FASEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAY  148 (251)
Q Consensus        69 ~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~  148 (251)
                      +++++.+++|++|+||||||+.....+.+.++|++.+++|+.+++.++++++|+|.       ..++||++||..+....
T Consensus        89 ~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~-------~~g~iv~isS~~~~~~~  161 (287)
T 3pxx_A           89 ELANAVAEFGKLDVVVANAGICPLGAHLPVQAFADAFDVDFVGVINTVHAALPYLT-------SGASIITTGSVAGLIAA  161 (287)
T ss_dssp             HHHHHHHHHSCCCEEEECCCCCCCCTTCCTHHHHHHHHHHTHHHHHHHHHHGGGCC-------TTCEEEEECCHHHHHHH
T ss_pred             HHHHHHHHcCCCCEEEECCCcCcccCcCCHHHHHHHhhhhhhhhHHHHHHHHHHhh-------cCcEEEEeccchhcccc
Confidence            99999999999999999999865444578899999999999999999999999983       36899999998876642


Q ss_pred             cCCcccccCCCCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccC
Q 025509          149 HEGIRFDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  211 (251)
Q Consensus       149 ~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  211 (251)
                      ....    .....+.++...|++||+|+++|+++++.|++++|  |+||+|+||+|+|++...
T Consensus       162 ~~~~----~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~g--i~vn~v~PG~v~T~~~~~  218 (287)
T 3pxx_A          162 AQPP----GAGGPQGPGGAGYSYAKQLVDSYTLQLAAQLAPQS--IRANVIHPTNVNTDMLNS  218 (287)
T ss_dssp             HCCC---------CHHHHHHHHHHHHHHHHHHHHHHHHHGGGT--CEEEEEEESSBSSTTTSS
T ss_pred             cccc----cccccCCCccchHHHHHHHHHHHHHHHHHHHhhcC--cEEEEEecCccccccccc
Confidence            1110    01111335678999999999999999999999999  999999999999999875

>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=100.00  E-value=1.1e-36  Score=259.08  Aligned_cols=186  Identities=26%  Similarity=0.333  Sum_probs=167.8

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCC---ceEEEEecCCCHHHHHHHHHHHHhcC
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSA---KVDAMELDLSSLASVRNFASEYNIQH   77 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~---~v~~~~~D~~~~~~i~~~~~~~~~~~   77 (251)
                      |++|||||++|||+++|++|+++|++|++++|+.+++++..+++.+.  +.   ++.++.+|++++++++++++++.+++
T Consensus        27 k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~  104 (297)
T 1xhl_A           27 KSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKA--GVPAEKINAVVADVTEASGQDDIINTTLAKF  104 (297)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT--TCCGGGEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCCCceEEEEecCCCCHHHHHHHHHHHHHhc
Confidence            58999999999999999999999999999999998888887777654  33   78999999999999999999999999


Q ss_pred             CCeeEEEEcCCCCC--C--CCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcc
Q 025509           78 HQLNILINNAGIMG--T--PFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIR  153 (251)
Q Consensus        78 g~id~lv~~ag~~~--~--~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~  153 (251)
                      |++|+||||||+..  +  +.+.+.++|++.+++|+.+++.++++++|.|+++      +|+||++||.++..       
T Consensus       105 g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~------~g~IV~isS~~~~~-------  171 (297)
T 1xhl_A          105 GKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQAVIEMTQKTKEHLIKT------KGEIVNVSSIVAGP-------  171 (297)
T ss_dssp             SCCCEEEECCCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT------TCEEEEECCGGGSS-------
T ss_pred             CCCCEEEECCCcCcCCCCccccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhc------CCEEEEEcCchhcc-------
Confidence            99999999999753  2  4577889999999999999999999999999874      38999999988765       


Q ss_pred             cccCCCCCCC-CcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccC
Q 025509          154 FDKINDPSGY-NGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  211 (251)
Q Consensus       154 ~~~~~~~~~~-~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  211 (251)
                              +. ++...|++||+|+++|+++++.|+++.|  |+||+|+||+++|++...
T Consensus       172 --------~~~~~~~~Y~asKaa~~~l~~~la~el~~~g--I~v~~v~PG~v~T~~~~~  220 (297)
T 1xhl_A          172 --------QAHSGYPYYACAKAALDQYTRCTAIDLIQHG--VRVNSVSPGAVATGFMGA  220 (297)
T ss_dssp             --------SCCTTSHHHHHHHHHHHHHHHHHHHHHGGGT--CEEEEEEECCBCSSHHHH
T ss_pred             --------CCCCCcchHHHHHHHHHHHHHHHHHHhcccC--eEEEEEeeCCCcCccccc
Confidence                    44 6778999999999999999999999999  999999999999998764

>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A*

Probab=100.00  E-value=1.1e-36  Score=257.18  Aligned_cols=182  Identities=19%  Similarity=0.210  Sum_probs=159.7

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      |++|||||++|||+++|++|+++|++|++++|+.+++++..+++     +..+.++++|+++.++++++++++.+++|++
T Consensus         6 k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i   80 (281)
T 3zv4_A            6 EVALITGGASGLGRALVDRFVAEGARVAVLDKSAERLRELEVAH-----GGNAVGVVGDVRSLQDQKRAAERCLAAFGKI   80 (281)
T ss_dssp             CEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHT-----BTTEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHc-----CCcEEEEEcCCCCHHHHHHHHHHHHHhcCCC
Confidence            68999999999999999999999999999999988777665443     5679999999999999999999999999999


Q ss_pred             eEEEEcCCCCCC---CC----cCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcc
Q 025509           81 NILINNAGIMGT---PF----MLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIR  153 (251)
Q Consensus        81 d~lv~~ag~~~~---~~----~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~  153 (251)
                      |+||||||+...   ..    +.+.++|++.+++|+.+++.++++++|+|+++      .|+||++||..+..       
T Consensus        81 D~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~------~g~iv~isS~~~~~-------  147 (281)
T 3zv4_A           81 DTLIPNAGIWDYSTALADLPEDKIDAAFDDIFHVNVKGYIHAVKACLPALVSS------RGSVVFTISNAGFY-------  147 (281)
T ss_dssp             CEEECCCCCCCTTCCGGGSCTTTHHHHHHHHHHHHTHHHHHHHHHHHHHHHHH------TCEEEEECCGGGTS-------
T ss_pred             CEEEECCCcCccccccccCChhhhHHHHHHHHhhhhHHHHHHHHHHHHHHHhc------CCeEEEEecchhcc-------
Confidence            999999997532   22    33456799999999999999999999999875      58999999988776       


Q ss_pred             cccCCCCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccC
Q 025509          154 FDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  211 (251)
Q Consensus       154 ~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  211 (251)
                              +.++...|++||+|+++|+++|+.|+++.   |+||+|+||+++|++...
T Consensus       148 --------~~~~~~~Y~asKaa~~~l~~~la~e~~~~---Irvn~v~PG~v~T~~~~~  194 (281)
T 3zv4_A          148 --------PNGGGPLYTATKHAVVGLVRQMAFELAPH---VRVNGVAPGGMNTDLRGP  194 (281)
T ss_dssp             --------SSSSCHHHHHHHHHHHHHHHHHHHHHTTT---SEEEEEEECSSCC--CCC
T ss_pred             --------CCCCCchhHHHHHHHHHHHHHHHHHhcCC---CEEEEEECCcCcCCcccc
Confidence                    67788899999999999999999999873   999999999999998754

>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*

Probab=100.00  E-value=1.2e-36  Score=256.45  Aligned_cols=187  Identities=29%  Similarity=0.386  Sum_probs=168.9

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      |++|||||++|||+++|++|+++|++|++++|+++.+++..+++.+.  +.++.++.+|+++.++++++++++.++++++
T Consensus        23 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i  100 (277)
T 2rhc_B           23 EVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREA--GVEADGRTCDVRSVPEIEALVAAVVERYGPV  100 (277)
T ss_dssp             CEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT--TCCEEEEECCTTCHHHHHHHHHHHHHHTCSC
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCceEEEECCCCCHHHHHHHHHHHHHHhCCC
Confidence            58999999999999999999999999999999988888877777654  4578899999999999999999999999999


Q ss_pred             eEEEEcCCCCC--CCCcCCchhhHHHHHHHHHHHHHHHHHHHHH--HHHhhccCCCCceEEEEcCccccccccCCccccc
Q 025509           81 NILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDT--MKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDK  156 (251)
Q Consensus        81 d~lv~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~  156 (251)
                      |+||||||+..  ++.+.+.++|++.+++|+.+++.++++++|.  |+++     +.++||++||.++..          
T Consensus       101 D~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~m~~~-----~~g~iv~isS~~~~~----------  165 (277)
T 2rhc_B          101 DVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLER-----GTGRIVNIASTGGKQ----------  165 (277)
T ss_dssp             SEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTTCHHHH-----TEEEEEEECCGGGTS----------
T ss_pred             CEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHhChhhHhhc-----CCeEEEEECcccccc----------
Confidence            99999999753  3567788999999999999999999999999  8775     358999999988765          


Q ss_pred             CCCCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccC
Q 025509          157 INDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  211 (251)
Q Consensus       157 ~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  211 (251)
                           +.++...|+++|+++++|+++++.|+++.|  |+||+|+||+++|++...
T Consensus       166 -----~~~~~~~Y~asK~a~~~~~~~la~e~~~~g--i~v~~v~PG~v~t~~~~~  213 (277)
T 2rhc_B          166 -----GVVHAAPYSASKHGVVGFTKALGLELARTG--ITVNAVCPGFVETPMAAS  213 (277)
T ss_dssp             -----CCTTCHHHHHHHHHHHHHHHHHHHHHTTTE--EEEEEEEECSBCSHHHHH
T ss_pred             -----CCCCCccHHHHHHHHHHHHHHHHHHHHHhC--cEEEEEecCcCcCchhhh
Confidence                 567788999999999999999999999988  999999999999998653

>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli}

Probab=100.00  E-value=2.1e-36  Score=254.13  Aligned_cols=190  Identities=29%  Similarity=0.373  Sum_probs=162.8

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEE-ecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCC
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMG-VRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQ   79 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~-~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~   79 (251)
                      |++|||||++|||+++|++|+++|++|+++ +|+.+.+++..+++.+.  +.++.++.+|+++.++++++++++.+++++
T Consensus        27 k~vlITGas~gIG~a~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~  104 (272)
T 4e3z_A           27 PVVLVTGGSRGIGAAVCRLAARQGWRVGVNYAANREAADAVVAAITES--GGEAVAIPGDVGNAADIAAMFSAVDRQFGR  104 (272)
T ss_dssp             CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT--TCEEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCChhHHHHHHHHHHhc--CCcEEEEEcCCCCHHHHHHHHHHHHHhCCC
Confidence            579999999999999999999999999776 67877778777777654  568999999999999999999999999999


Q ss_pred             eeEEEEcCCCCC---CCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCccccc
Q 025509           80 LNILINNAGIMG---TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDK  156 (251)
Q Consensus        80 id~lv~~ag~~~---~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~  156 (251)
                      +|+||||||+..   ++.+.+.++|++.+++|+.+++.++++++|.|.++.+  +..++||++||.++..          
T Consensus       105 id~li~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~--~~~g~iv~isS~~~~~----------  172 (272)
T 4e3z_A          105 LDGLVNNAGIVDYPQRVDEMSVERIERMLRVNVTGSILCAAEAVRRMSRLYS--GQGGAIVNVSSMAAIL----------  172 (272)
T ss_dssp             CCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHCGGGT--CCCEEEEEECCTHHHH----------
T ss_pred             CCEEEECCCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHhcc--CCCCEEEEEcchHhcc----------
Confidence            999999999753   3567789999999999999999999999999976421  2368999999988876          


Q ss_pred             CCCCCCCC-cccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccC
Q 025509          157 INDPSGYN-GFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  211 (251)
Q Consensus       157 ~~~~~~~~-~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  211 (251)
                           +.+ .+..|++||+|+++|+++++.|+.+.|  |+|++|+||+++|++...
T Consensus       173 -----~~~~~~~~Y~asKaa~~~~~~~la~e~~~~g--i~v~~v~PG~v~t~~~~~  221 (272)
T 4e3z_A          173 -----GSATQYVDYAASKAAIDTFTIGLAREVAAEG--IRVNAVRPGIIETDLHAS  221 (272)
T ss_dssp             -----CCTTTCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECSBC------
T ss_pred             -----CCCCCcchhHHHHHHHHHHHHHHHHHHHHcC--cEEEEEecCCCcCCcccc
Confidence                 333 567899999999999999999999999  999999999999998765

>1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A*

Probab=100.00  E-value=1.3e-36  Score=253.62  Aligned_cols=189  Identities=25%  Similarity=0.300  Sum_probs=166.8

Q ss_pred             CEEEEECCCChhHHHHHHHHHH---cCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHh--
Q 025509            1 MDIVITGATSGIGTETARVLAL---RGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNI--   75 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~---~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~--   75 (251)
                      |++|||||++|||+++|++|++   +|++|++++|+.+.+++..+++.+..++.++.++++|++++++++++++++.+  
T Consensus         7 k~~lVTGas~gIG~~ia~~l~~~~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   86 (259)
T 1oaa_A            7 AVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDLKVVLAAADLGTEAGVQRLLSAVRELP   86 (259)
T ss_dssp             EEEEESSCSSHHHHHHHHHHHTTBCTTCEEEEEESCHHHHHHHHHHHHHHCTTSEEEEEECCTTSHHHHHHHHHHHHHSC
T ss_pred             cEEEEeCCCChHHHHHHHHHHHhhcCCCeEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEecCCCCHHHHHHHHHHHHhcc
Confidence            5799999999999999999999   89999999999988888888887765567899999999999999999999988  


Q ss_pred             cCCCee--EEEEcCCCCC----CCCc-CCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccc
Q 025509           76 QHHQLN--ILINNAGIMG----TPFM-LSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAY  148 (251)
Q Consensus        76 ~~g~id--~lv~~ag~~~----~~~~-~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~  148 (251)
                      .+|++|  +||||||+..    ++.+ .+.++|++++++|+.+++.++++++|+|+++.   ++.|+||++||.++..  
T Consensus        87 ~~g~~d~~~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~---~~~g~iv~isS~~~~~--  161 (259)
T 1oaa_A           87 RPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWALNLTSMLCLTSGTLNAFQDSP---GLSKTVVNISSLCALQ--  161 (259)
T ss_dssp             CCTTCCEEEEEECCCCCCCCSSCGGGCCCHHHHHHHHHHHTHHHHHHHHHHHHTSCCCT---TCEEEEEEECCGGGTS--
T ss_pred             ccccCCccEEEECCcccCCCCcchhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc---CCCceEEEEcCchhcC--
Confidence            678888  9999999753    2445 57899999999999999999999999986530   0248999999988776  


Q ss_pred             cCCcccccCCCCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccC
Q 025509          149 HEGIRFDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  211 (251)
Q Consensus       149 ~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  211 (251)
                                   +.++...|++||+|+++|+++++.|+.  +  |+||+|+||+++|++...
T Consensus       162 -------------~~~~~~~Y~asKaa~~~~~~~la~e~~--~--i~vn~v~PG~v~T~~~~~  207 (259)
T 1oaa_A          162 -------------PYKGWGLYCAGKAARDMLYQVLAAEEP--S--VRVLSYAPGPLDNDMQQL  207 (259)
T ss_dssp             -------------CCTTCHHHHHHHHHHHHHHHHHHHHCT--T--EEEEEEECCSBSSHHHHH
T ss_pred             -------------CCCCccHHHHHHHHHHHHHHHHHhhCC--C--ceEEEecCCCcCcchHHH
Confidence                         677888999999999999999999996  3  999999999999998653

>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}

Probab=100.00  E-value=5.1e-37  Score=260.84  Aligned_cols=183  Identities=26%  Similarity=0.277  Sum_probs=162.6

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCc--hhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCC
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDI--AAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHH   78 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~--~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g   78 (251)
                      |++|||||++|||+++|++|+++|++|++++|+.  ...++..+.+.+.  +.++.++++|++|.++++++++++.+++|
T Consensus        50 k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g  127 (294)
T 3r3s_A           50 RKALVTGGDSGIGRAAAIAYAREGADVAINYLPAEEEDAQQVKALIEEC--GRKAVLLPGDLSDESFARSLVHKAREALG  127 (294)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHT--TCCEEECCCCTTSHHHHHHHHHHHHHHHT
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchhHHHHHHHHHHHc--CCcEEEEEecCCCHHHHHHHHHHHHHHcC
Confidence            6899999999999999999999999999999873  3445555544443  56799999999999999999999999999


Q ss_pred             CeeEEEEcCCCCC---CCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccc
Q 025509           79 QLNILINNAGIMG---TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFD  155 (251)
Q Consensus        79 ~id~lv~~ag~~~---~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~  155 (251)
                      ++|+||||||...   ++.+.+.++|++.+++|+.+++.++++++|+|.+       .|+||++||..+..         
T Consensus       128 ~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~-------~g~Iv~isS~~~~~---------  191 (294)
T 3r3s_A          128 GLDILALVAGKQTAIPEIKDLTSEQFQQTFAVNVFALFWITQEAIPLLPK-------GASIITTSSIQAYQ---------  191 (294)
T ss_dssp             CCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCCT-------TCEEEEECCGGGTS---------
T ss_pred             CCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhhc-------CCEEEEECChhhcc---------
Confidence            9999999999743   3567899999999999999999999999998854       48999999988876         


Q ss_pred             cCCCCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcc
Q 025509          156 KINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNII  209 (251)
Q Consensus       156 ~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~  209 (251)
                            +.++...|++||+|+++|+++|+.|++++|  |+||+|+||+|+|++.
T Consensus       192 ------~~~~~~~Y~asKaa~~~l~~~la~e~~~~g--I~vn~v~PG~v~t~~~  237 (294)
T 3r3s_A          192 ------PSPHLLDYAATKAAILNYSRGLAKQVAEKG--IRVNIVAPGPIWTALQ  237 (294)
T ss_dssp             ------CCTTCHHHHHHHHHHHHHHHHHHHHHGGGT--CEEEEEEECSBCSHHH
T ss_pred             ------CCCCchHHHHHHHHHHHHHHHHHHHHhhcC--eEEEEEecCcCccccc
Confidence                  677888999999999999999999999999  9999999999999984

>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*

Probab=100.00  E-value=2.5e-36  Score=252.77  Aligned_cols=188  Identities=16%  Similarity=0.158  Sum_probs=166.2

Q ss_pred             CEEEEECCC--ChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCC
Q 025509            1 MDIVITGAT--SGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHH   78 (251)
Q Consensus         1 k~vlItG~s--~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g   78 (251)
                      |++|||||+  +|||+++|++|+++|++|++++|+....+ ..+++.+..+..++.++++|+++.++++++++++.++++
T Consensus         8 k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~~~~~-~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g   86 (266)
T 3oig_A            8 RNIVVMGVANKRSIAWGIARSLHEAGARLIFTYAGERLEK-SVHELAGTLDRNDSIILPCDVTNDAEIETCFASIKEQVG   86 (266)
T ss_dssp             CEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHH-HHHHHHHTSSSCCCEEEECCCSSSHHHHHHHHHHHHHHS
T ss_pred             CEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEecCchHHHH-HHHHHHHhcCCCCceEEeCCCCCHHHHHHHHHHHHHHhC
Confidence            689999999  66999999999999999999999865444 444455555455799999999999999999999999999


Q ss_pred             CeeEEEEcCCCCC------CCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCc
Q 025509           79 QLNILINNAGIMG------TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGI  152 (251)
Q Consensus        79 ~id~lv~~ag~~~------~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~  152 (251)
                      ++|+||||||+..      +..+.+.++|+..+++|+.+++.++++++|+|++       .|+||++||.++..      
T Consensus        87 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-------~g~iv~isS~~~~~------  153 (266)
T 3oig_A           87 VIHGIAHCIAFANKEELVGEYLNTNRDGFLLAHNISSYSLTAVVKAARPMMTE-------GGSIVTLTYLGGEL------  153 (266)
T ss_dssp             CCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTT-------CEEEEEEECGGGTS------
T ss_pred             CeeEEEEccccccccccccchhhccHHHHHHHHHHhHHHHHHHHHHHHhhcCC-------CceEEEEecccccc------
Confidence            9999999999753      3557788999999999999999999999999864       58999999988876      


Q ss_pred             ccccCCCCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCCc
Q 025509          153 RFDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRHNS  213 (251)
Q Consensus       153 ~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~~~  213 (251)
                               +.++...|++||+|+++|+++|+.|+.++|  |+||+|+||+++|++.....
T Consensus       154 ---------~~~~~~~Y~asKaa~~~~~~~la~e~~~~g--i~v~~v~PG~v~T~~~~~~~  203 (266)
T 3oig_A          154 ---------VMPNYNVMGVAKASLDASVKYLAADLGKEN--IRVNSISAGPIRTLSAKGIS  203 (266)
T ss_dssp             ---------CCTTTHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECCCCSGGGTTCT
T ss_pred             ---------cCCCcchhHHHHHHHHHHHHHHHHHHhhcC--cEEEEEecCccccccccccc
Confidence                     677888999999999999999999999999  99999999999999987653

>4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A*

Probab=100.00  E-value=5.3e-36  Score=251.07  Aligned_cols=189  Identities=28%  Similarity=0.344  Sum_probs=168.9

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEE-EecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCC
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVM-GVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQ   79 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~-~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~   79 (251)
                      |++|||||++|||+++|++|+++|++|++ ..|+...+++..+++.+.  +.++.++.+|+++.++++++++++.+++++
T Consensus        27 k~vlVTGas~gIG~~la~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~  104 (267)
T 4iiu_A           27 RSVLVTGASKGIGRAIARQLAADGFNIGVHYHRDAAGAQETLNAIVAN--GGNGRLLSFDVANREQCREVLEHEIAQHGA  104 (267)
T ss_dssp             CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT--TCCEEEEECCTTCHHHHHHHHHHHHHHHCC
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhc--CCceEEEEecCCCHHHHHHHHHHHHHHhCC
Confidence            57999999999999999999999999966 457777778887777665  467999999999999999999999999999


Q ss_pred             eeEEEEcCCCCCC--CCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccccC
Q 025509           80 LNILINNAGIMGT--PFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKI  157 (251)
Q Consensus        80 id~lv~~ag~~~~--~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~  157 (251)
                      +|+||||||+...  +.+.+.++|+..+++|+.+++.+++++++.|.++    +..++||++||.++..           
T Consensus       105 id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~----~~~g~iv~isS~~~~~-----------  169 (267)
T 4iiu_A          105 WYGVVSNAGIARDAAFPALSNDDWDAVIHTNLDSFYNVIQPCIMPMIGA----RQGGRIITLSSVSGVM-----------  169 (267)
T ss_dssp             CSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH----TSCEEEEEECCHHHHH-----------
T ss_pred             ccEEEECCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc----CCCcEEEEEcchHhcc-----------
Confidence            9999999997643  5577899999999999999999999999998743    2478999999998877           


Q ss_pred             CCCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCC
Q 025509          158 NDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRHN  212 (251)
Q Consensus       158 ~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~~  212 (251)
                          +.+++..|++||+|+++|+++++.|+.+.|  |+|++|+||+++|++....
T Consensus       170 ----~~~~~~~Y~asKaa~~~~~~~la~e~~~~g--i~v~~v~PG~v~t~~~~~~  218 (267)
T 4iiu_A          170 ----GNRGQVNYSAAKAGIIGATKALAIELAKRK--ITVNCIAPGLIDTGMIEME  218 (267)
T ss_dssp             ----CCTTCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECSBCSTTCCCC
T ss_pred             ----CCCCCchhHHHHHHHHHHHHHHHHHHhhcC--eEEEEEEEeeecCCccccc
Confidence                677888999999999999999999999999  9999999999999998754

>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium}

Probab=100.00  E-value=1.5e-36  Score=261.10  Aligned_cols=192  Identities=23%  Similarity=0.269  Sum_probs=170.9

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecC----------chhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHH
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRD----------IAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFA   70 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~----------~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~   70 (251)
                      |++|||||++|||+++|++|+++|++|++++|+          .+.+++..+++.+.  +..+.++.+|++|.+++++++
T Consensus        28 k~vlVTGas~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dv~d~~~v~~~~  105 (322)
T 3qlj_A           28 RVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSPASGGSAAQSVVDEITAA--GGEAVADGSNVADWDQAAGLI  105 (322)
T ss_dssp             CEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSSBTCTTSHHHHHHHHHHHT--TCEEEEECCCTTSHHHHHHHH
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCcccccccccccHHHHHHHHHHHHhc--CCcEEEEECCCCCHHHHHHHH
Confidence            689999999999999999999999999999997          67778887777665  567999999999999999999


Q ss_pred             HHHHhcCCCeeEEEEcCCCCC--CCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhcc-CCCCceEEEEcCcccccc
Q 025509           71 SEYNIQHHQLNILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARK-SGGEGRIINVSSEGHRLA  147 (251)
Q Consensus        71 ~~~~~~~g~id~lv~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~-~~~~g~iv~vsS~~~~~~  147 (251)
                      +++.+++|++|+||||||+..  ++.+.+.++|++.+++|+.+++.++++++|+|.+..+. .+..|+||++||..+.. 
T Consensus       106 ~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~~~~~g~IV~isS~~~~~-  184 (322)
T 3qlj_A          106 QTAVETFGGLDVLVNNAGIVRDRMIANTSEEEFDAVIAVHLKGHFATMRHAAAYWRGLSKAGKAVDGRIINTSSGAGLQ-  184 (322)
T ss_dssp             HHHHHHHSCCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCEEEEEECCHHHHH-
T ss_pred             HHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHccccCCCCCcEEEEEcCHHHcc-
Confidence            999999999999999999764  35678899999999999999999999999999875321 12248999999998877 


Q ss_pred             ccCCcccccCCCCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCC
Q 025509          148 YHEGIRFDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRHN  212 (251)
Q Consensus       148 ~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~~  212 (251)
                                    +.++...|++||+|+++|+++++.|+++.|  |+||+|+|| +.|++....
T Consensus       185 --------------~~~~~~~Y~asKaal~~l~~~la~e~~~~g--I~vn~v~PG-~~t~~~~~~  232 (322)
T 3qlj_A          185 --------------GSVGQGNYSAAKAGIATLTLVGAAEMGRYG--VTVNAIAPS-ARTRMTETV  232 (322)
T ss_dssp             --------------CBTTCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEEC-TTSCCSCCS
T ss_pred             --------------CCCCCccHHHHHHHHHHHHHHHHHHhcccC--cEEEEecCC-CCCccchhh
Confidence                          677888999999999999999999999999  999999999 999987654

>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A

Probab=100.00  E-value=1.6e-36  Score=252.56  Aligned_cols=184  Identities=27%  Similarity=0.319  Sum_probs=164.1

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      |++|||||++|||+++|++|+++|++|++++|+.+  ++..+++.+.  +.++.++.+|++|+++++++++++.+++|++
T Consensus         5 k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~--~~~~~~l~~~--~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~i   80 (255)
T 2q2v_A            5 KTALVTGSTSGIGLGIAQVLARAGANIVLNGFGDP--APALAEIARH--GVKAVHHPADLSDVAQIEALFALAEREFGGV   80 (255)
T ss_dssp             CEEEESSCSSHHHHHHHHHHHHTTCEEEEECSSCC--HHHHHHHHTT--SCCEEEECCCTTSHHHHHHHHHHHHHHHSSC
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCch--HHHHHHHHhc--CCceEEEeCCCCCHHHHHHHHHHHHHHcCCC
Confidence            68999999999999999999999999999999875  4445555432  4568899999999999999999999999999


Q ss_pred             eEEEEcCCCCC--CCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccccCC
Q 025509           81 NILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKIN  158 (251)
Q Consensus        81 d~lv~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~  158 (251)
                      |+||||||+..  ++.+.+.++|++.+++|+.+++.++++++|+|+++     +.++||++||.++..            
T Consensus        81 d~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~-----~~g~iv~isS~~~~~------------  143 (255)
T 2q2v_A           81 DILVNNAGIQHVAPVEQFPLESWDKIIALNLSAVFHGTRLALPGMRAR-----NWGRIINIASVHGLV------------  143 (255)
T ss_dssp             SEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT-----TCEEEEEECCGGGTS------------
T ss_pred             CEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-----CCcEEEEEcCchhcc------------
Confidence            99999999754  35567889999999999999999999999999875     468999999988765            


Q ss_pred             CCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCccc
Q 025509          159 DPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIR  210 (251)
Q Consensus       159 ~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~  210 (251)
                         +.++...|+++|+++++|+++++.|+.+.|  |+||+|+||++.|++..
T Consensus       144 ---~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g--i~v~~v~Pg~v~t~~~~  190 (255)
T 2q2v_A          144 ---GSTGKAAYVAAKHGVVGLTKVVGLETATSN--VTCNAICPGWVLTPLVQ  190 (255)
T ss_dssp             ---CCTTBHHHHHHHHHHHHHHHHHHHHTTTSS--EEEEEEEESSBCCHHHH
T ss_pred             ---CCCCchhHHHHHHHHHHHHHHHHHHhcccC--cEEEEEeeCCCcCcchh
Confidence               567788999999999999999999999999  99999999999999865

>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens}

Probab=100.00  E-value=3.1e-36  Score=251.51  Aligned_cols=186  Identities=23%  Similarity=0.254  Sum_probs=164.0

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhc-CCC
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQ-HHQ   79 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~-~g~   79 (251)
                      |++|||||++|||+++|++|+++|++|++++|+.+.+++..+++.+.  +.++.++++|++|+++++++++++.++ +|+
T Consensus         6 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~g~   83 (260)
T 2qq5_A            6 QVCVVTGASRGIGRGIALQLCKAGATVYITGRHLDTLRVVAQEAQSL--GGQCVPVVCDSSQESEVRSLFEQVDREQQGR   83 (260)
T ss_dssp             CEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHH--SSEEEEEECCTTSHHHHHHHHHHHHHHHTTC
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHc--CCceEEEECCCCCHHHHHHHHHHHHHhcCCC
Confidence            68999999999999999999999999999999988888888777655  457899999999999999999998876 899


Q ss_pred             eeEEEEcCC--C-------CCCCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccC
Q 025509           80 LNILINNAG--I-------MGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHE  150 (251)
Q Consensus        80 id~lv~~ag--~-------~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~  150 (251)
                      +|+||||||  +       ..++.+.+.++|+.++++|+.+++.++++++|+|+++     +.|+||++||.++..    
T Consensus        84 id~lvnnAg~g~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-----~~g~iv~isS~~~~~----  154 (260)
T 2qq5_A           84 LDVLVNNAYAGVQTILNTRNKAFWETPASMWDDINNVGLRGHYFCSVYGARLMVPA-----GQGLIVVISSPGSLQ----  154 (260)
T ss_dssp             CCEEEECCCTTHHHHHHTTTCCTTTSCTTHHHHHHTTTTHHHHHHHHHHHHHHGGG-----TCCEEEEECCGGGTS----
T ss_pred             ceEEEECCccccccccccCCCccccCCHHHHHHHHhhcchhHHHHHHHHHHHHhhc-----CCcEEEEEcChhhcC----
Confidence            999999995  2       2345677889999999999999999999999999875     468999999987653    


Q ss_pred             CcccccCCCCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccC
Q 025509          151 GIRFDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  211 (251)
Q Consensus       151 ~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  211 (251)
                                 + ++...|++||+|+++|+++++.|+++.|  |+||+|+||+++|++...
T Consensus       155 -----------~-~~~~~Y~asK~a~~~~~~~la~e~~~~g--i~v~~v~PG~v~T~~~~~  201 (260)
T 2qq5_A          155 -----------Y-MFNVPYGVGKAACDKLAADCAHELRRHG--VSCVSLWPGIVQTELLKE  201 (260)
T ss_dssp             -----------C-CSSHHHHHHHHHHHHHHHHHHHHHGGGT--CEEEEEECCCSCTTTC--
T ss_pred             -----------C-CCCCchHHHHHHHHHHHHHHHHHhccCC--eEEEEEecCccccHHHHH
Confidence                       2 2356899999999999999999999999  999999999999999754

>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0

Probab=100.00  E-value=4.5e-36  Score=250.87  Aligned_cols=191  Identities=23%  Similarity=0.323  Sum_probs=163.7

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      |++|||||++|||+++|++|+++|++|++++|+.....+...+..+.. +.++.++++|++|.++++++++++.++++++
T Consensus         8 k~vlVTGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~i   86 (264)
T 3i4f_A            8 RHALITAGTKGLGKQVTEKLLAKGYSVTVTYHSDTTAMETMKETYKDV-EERLQFVQADVTKKEDLHKIVEEAMSHFGKI   86 (264)
T ss_dssp             CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTGGG-GGGEEEEECCTTSHHHHHHHHHHHHHHHSCC
T ss_pred             CEEEEeCCCchhHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHhc-CCceEEEEecCCCHHHHHHHHHHHHHHhCCC
Confidence            579999999999999999999999999999887655444433333322 4579999999999999999999999999999


Q ss_pred             eEEEEcCCC--C--CCCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCccccc
Q 025509           81 NILINNAGI--M--GTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDK  156 (251)
Q Consensus        81 d~lv~~ag~--~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~  156 (251)
                      |+||||||.  .  .+..+.+.++|++.+++|+.+++.++++++|+|+++     +.++||++||.....          
T Consensus        87 d~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-----~~g~iv~iss~~~~~----------  151 (264)
T 3i4f_A           87 DFLINNAGPYVFERKKLVDYEEDEWNEMIQGNLTAVFHLLKLVVPVMRKQ-----NFGRIINYGFQGADS----------  151 (264)
T ss_dssp             CEEECCCCCCCCSCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----TCEEEEEECCTTGGG----------
T ss_pred             CEEEECCcccccCCCccccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhc-----CCCeEEEEeechhcc----------
Confidence            999999994  3  235677889999999999999999999999999886     468999999974321          


Q ss_pred             CCCCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCC
Q 025509          157 INDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRHN  212 (251)
Q Consensus       157 ~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~~  212 (251)
                         ..++++...|++||+|+++|+++++.|+.+.|  |+||+|+||++.|++....
T Consensus       152 ---~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~g--i~v~~v~PG~v~t~~~~~~  202 (264)
T 3i4f_A          152 ---APGWIYRSAFAAAKVGLVSLTKTVAYEEAEYG--ITANMVCPGDIIGEMKEAT  202 (264)
T ss_dssp             ---CCCCTTCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECCCCGGGGSCC
T ss_pred             ---cCCCCCCchhHHHHHHHHHHHHHHHHHhhhcC--cEEEEEccCCccCccchhc
Confidence               01566778999999999999999999999999  9999999999999998754

>3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti}

Probab=100.00  E-value=3.5e-36  Score=258.98  Aligned_cols=187  Identities=26%  Similarity=0.284  Sum_probs=159.6

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecC-----chhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHh
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRD-----IAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNI   75 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~-----~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~   75 (251)
                      |++|||||++|||+++|++|+++|++|++++|+     .+.++++.+.+.+.  +.++.++.+|++|.++++++++++.+
T Consensus         6 k~vlVTGas~GIG~aia~~L~~~G~~V~~~~r~~~~r~~~~~~~l~~~~~~~--~~~~~~~~~Dvtd~~~v~~~~~~~~~   83 (324)
T 3u9l_A            6 KIILITGASSGFGRLTAEALAGAGHRVYASMRDIVGRNASNVEAIAGFARDN--DVDLRTLELDVQSQVSVDRAIDQIIG   83 (324)
T ss_dssp             CEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCTTTTTHHHHHHHHHHHHHH--TCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCEEEEecCcccccCHHHHHHHHHHHHhc--CCcEEEEEeecCCHHHHHHHHHHHHH
Confidence            589999999999999999999999999988775     34455555544443  56799999999999999999999999


Q ss_pred             cCCCeeEEEEcCCCCC--CCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcc
Q 025509           76 QHHQLNILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIR  153 (251)
Q Consensus        76 ~~g~id~lv~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~  153 (251)
                      ++|++|+||||||+..  ++.+.+.++|++++++|+.|++.++++++|+|+++     +.|+||++||.++...      
T Consensus        84 ~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~a~lp~m~~~-----~~g~iV~isS~~~~~~------  152 (324)
T 3u9l_A           84 EDGRIDVLIHNAGHMVFGPAEAFTPEQFAELYDINVLSTQRVNRAALPHMRRQ-----KHGLLIWISSSSSAGG------  152 (324)
T ss_dssp             HHSCCSEEEECCCCCBCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----TCEEEEEECCGGGTSC------
T ss_pred             HcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-----CCCEEEEEecchhccC------
Confidence            9999999999999753  46678999999999999999999999999999886     5789999999887641      


Q ss_pred             cccCCCCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCccc
Q 025509          154 FDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIR  210 (251)
Q Consensus       154 ~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~  210 (251)
                              +.+....|++||+|+++|+++++.|+++.|  |+|++|+||++.|++..
T Consensus       153 --------~~~~~~~Y~asKaa~~~~~~~la~el~~~g--I~v~~v~PG~v~t~~~~  199 (324)
T 3u9l_A          153 --------TPPYLAPYFAAKAAMDAIAVQYARELSRWG--IETSIIVPGAFTSGTNH  199 (324)
T ss_dssp             --------CCSSCHHHHHHHHHHHHHHHHHHHHHHTTT--EEEEEEEECCC------
T ss_pred             --------CCCcchhHHHHHHHHHHHHHHHHHHhhhhC--cEEEEEECCccccCchh
Confidence                    345677899999999999999999999999  99999999999987643

>2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2

Probab=100.00  E-value=6.5e-36  Score=257.73  Aligned_cols=190  Identities=20%  Similarity=0.210  Sum_probs=166.5

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEe-cCchhHHHHHHHHHhhCCCCceEEEEecCCCHH---------------
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGV-RDIAAGKDVKETIVKEIPSAKVDAMELDLSSLA---------------   64 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~-r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~---------------   64 (251)
                      |++|||||++|||+++|++|+++|++|++++ |+.+.++++.+++.+.. +.++.++++|+++.+               
T Consensus        47 k~~lVTGas~GIG~aia~~La~~G~~Vv~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~~  125 (328)
T 2qhx_A           47 PVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARR-PNSAITVQADLSNVATAPVSGADGSAPVTL  125 (328)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHS-TTCEEEEECCCSSSCBCC-------CCBCH
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhhc-CCeEEEEEeeCCCchhcccccccccccccc
Confidence            5799999999999999999999999999999 99888888888776343 457999999999999               


Q ss_pred             --HHHHHHHHHHhcCCCeeEEEEcCCCCC--CCCcCC--------------chhhHHHHHHHHHHHHHHHHHHHHHHHHh
Q 025509           65 --SVRNFASEYNIQHHQLNILINNAGIMG--TPFMLS--------------KDNIELQFATNHLGHFLLTNLLLDTMKKT  126 (251)
Q Consensus        65 --~i~~~~~~~~~~~g~id~lv~~ag~~~--~~~~~~--------------~~~~~~~~~~n~~~~~~l~~~~~~~~~~~  126 (251)
                        +++++++++.+++|++|+||||||+..  ++.+.+              .++|+..+++|+.+++.++++++|.|.++
T Consensus       126 ~~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~  205 (328)
T 2qhx_A          126 FTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAGT  205 (328)
T ss_dssp             HHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCSCC-------------CHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHS
T ss_pred             HHHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhcCccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence              999999999999999999999999753  345666              88999999999999999999999999875


Q ss_pred             hc-cCCCCceEEEEcCccccccccCCcccccCCCCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccc
Q 025509          127 AR-KSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIA  205 (251)
Q Consensus       127 ~~-~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~  205 (251)
                      +. .....++||++||..+..               +.++...|++||+|+++|+++|+.|+++.|  |+||+|+||+|+
T Consensus       206 ~~~~~~~~g~IV~isS~~~~~---------------~~~~~~~Y~asKaal~~l~~~la~el~~~g--Irvn~v~PG~v~  268 (328)
T 2qhx_A          206 PAKHRGTNYSIINMVDAMTNQ---------------PLLGYTIYTMAKGALEGLTRSAALELAPLQ--IRVNGVGPGLSV  268 (328)
T ss_dssp             CGGGSCSCEEEEEECCTTTTS---------------CCTTCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEESSBS
T ss_pred             CCcCCCCCcEEEEECchhhcc---------------CCCCcHHHHHHHHHHHHHHHHHHHHHhhcC--cEEEEEecCccc
Confidence            21 001158999999988765               667788999999999999999999999999  999999999999


Q ss_pred             CCc
Q 025509          206 TNI  208 (251)
Q Consensus       206 t~~  208 (251)
                      |++
T Consensus       269 T~~  271 (328)
T 2qhx_A          269 LVD  271 (328)
T ss_dssp             CCC
T ss_pred             CCc
Confidence            999

>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ...

Probab=100.00  E-value=2.1e-36  Score=256.16  Aligned_cols=190  Identities=24%  Similarity=0.231  Sum_probs=163.3

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCc-hhHHHHHHHHHhhCCCCceEEEEecCCC----HHHHHHHHHHHHh
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDI-AAGKDVKETIVKEIPSAKVDAMELDLSS----LASVRNFASEYNI   75 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~-~~~~~~~~~~~~~~~~~~v~~~~~D~~~----~~~i~~~~~~~~~   75 (251)
                      |++|||||++|||+++|++|+++|++|++++|+. +.++++.+++.+.. +..+.++++|+++    .++++++++++.+
T Consensus        24 k~~lVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~~l~~~~-~~~~~~~~~Dv~~~~~~~~~v~~~~~~~~~  102 (288)
T 2x9g_A           24 PAAVVTGAAKRIGRAIAVKLHQTGYRVVIHYHNSAEAAVSLADELNKER-SNTAVVCQADLTNSNVLPASCEEIINSCFR  102 (288)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHHTCEEEEEESSCHHHHHHHHHHHHHHS-TTCEEEEECCCSCSTTHHHHHHHHHHHHHH
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHHHhhc-CCceEEEEeecCCccCCHHHHHHHHHHHHH
Confidence            6899999999999999999999999999999998 78888877776333 4578999999999    9999999999999


Q ss_pred             cCCCeeEEEEcCCCCCC--C-----Cc-----CCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhc-cCCCCceEEEEcCc
Q 025509           76 QHHQLNILINNAGIMGT--P-----FM-----LSKDNIELQFATNHLGHFLLTNLLLDTMKKTAR-KSGGEGRIINVSSE  142 (251)
Q Consensus        76 ~~g~id~lv~~ag~~~~--~-----~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~-~~~~~g~iv~vsS~  142 (251)
                      .+|++|+||||||+...  +     .+     .+.++|++.+++|+.+++.++++++|+|+++.. .....++||++||.
T Consensus       103 ~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~iv~isS~  182 (288)
T 2x9g_A          103 AFGRCDVLVNNASAFYPTPLVQGDHEDNSNGKTVETQVAELIGTNAIAPFLLTMSFAQRQKGTNPNCTSSNLSIVNLCDA  182 (288)
T ss_dssp             HHSCCCEEEECCCCCCCCCSCCC--------CCHHHHHHHHHHHHTHHHHHHHHHHHHHC--------CCCEEEEEECCT
T ss_pred             hcCCCCEEEECCCCCCCCccccccchhcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCCCCCCeEEEEEecc
Confidence            99999999999997532  3     45     677899999999999999999999999977521 00116899999998


Q ss_pred             cccccccCCcccccCCCCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCc
Q 025509          143 GHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNI  208 (251)
Q Consensus       143 ~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~  208 (251)
                      .+..               +.+++..|++||+|+++|+++++.|+++.|  |+||+|+||++.|++
T Consensus       183 ~~~~---------------~~~~~~~Y~asKaa~~~l~~~la~e~~~~g--I~vn~v~PG~v~t~~  231 (288)
T 2x9g_A          183 MVDQ---------------PCMAFSLYNMGKHALVGLTQSAALELAPYG--IRVNGVAPGVSLLPV  231 (288)
T ss_dssp             TTTS---------------CCTTCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEESSCSCCT
T ss_pred             cccC---------------CCCCCchHHHHHHHHHHHHHHHHHHhhccC--eEEEEEEeccccCcc
Confidence            8765               667788999999999999999999999999  999999999999999

>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium}

Probab=100.00  E-value=1.4e-36  Score=255.10  Aligned_cols=176  Identities=25%  Similarity=0.321  Sum_probs=158.6

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      |+||||||++|||+++|++|+++|++|++++|+....            ...+..+++|++|.++++++++++.+++|++
T Consensus        15 k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~------------~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i   82 (269)
T 3vtz_A           15 KVAIVTGGSSGIGLAVVDALVRYGAKVVSVSLDEKSD------------VNVSDHFKIDVTNEEEVKEAVEKTTKKYGRI   82 (269)
T ss_dssp             CEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCC--C------------TTSSEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCchhc------------cCceeEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence            6899999999999999999999999999999986542            1257788999999999999999999999999


Q ss_pred             eEEEEcCCCCC--CCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccccCC
Q 025509           81 NILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKIN  158 (251)
Q Consensus        81 d~lv~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~  158 (251)
                      |+||||||+..  ++.+.+.++|++.+++|+.+++.++++++|+|+++     +.|+||++||..+..            
T Consensus        83 D~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~-----~~g~iv~isS~~~~~------------  145 (269)
T 3vtz_A           83 DILVNNAGIEQYSPLHLTPTEIWRRIIDVNVNGSYLMAKYTIPVMLAI-----GHGSIINIASVQSYA------------  145 (269)
T ss_dssp             CEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----TCEEEEEECCGGGTS------------
T ss_pred             CEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc-----CCCEEEEECchhhcc------------
Confidence            99999999753  35677899999999999999999999999999886     578999999988876            


Q ss_pred             CCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccC
Q 025509          159 DPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  211 (251)
Q Consensus       159 ~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  211 (251)
                         +.++...|++||+|+++|+++++.|+++ |  |+||+|+||+|+|++...
T Consensus       146 ---~~~~~~~Y~asKaa~~~l~~~la~e~~~-~--i~vn~v~PG~v~T~~~~~  192 (269)
T 3vtz_A          146 ---ATKNAAAYVTSKHALLGLTRSVAIDYAP-K--IRCNAVCPGTIMTPMVIK  192 (269)
T ss_dssp             ---BCTTCHHHHHHHHHHHHHHHHHHHHHTT-T--EEEEEEEECSBCCHHHHH
T ss_pred             ---CCCCChhHHHHHHHHHHHHHHHHHHhcC-C--CEEEEEEECCCcCcchhh
Confidence               6777889999999999999999999988 7  999999999999998653

>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2

Probab=100.00  E-value=3.8e-36  Score=250.50  Aligned_cols=180  Identities=27%  Similarity=0.336  Sum_probs=161.5

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      |++|||||++|||+++|++|+++|++|++++|+.+. ++..+++     . . .++++|+++.++++++++++.+++|++
T Consensus         7 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~-~~~~~~~-----~-~-~~~~~D~~~~~~~~~~~~~~~~~~g~i   78 (256)
T 2d1y_A            7 KGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEG-KEVAEAI-----G-G-AFFQVDLEDERERVRFVEEAAYALGRV   78 (256)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTH-HHHHHHH-----T-C-EEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChhH-HHHHHHh-----h-C-CEEEeeCCCHHHHHHHHHHHHHHcCCC
Confidence            689999999999999999999999999999999876 5555444     2 3 788999999999999999999899999


Q ss_pred             eEEEEcCCCCC--CCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccccCC
Q 025509           81 NILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKIN  158 (251)
Q Consensus        81 d~lv~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~  158 (251)
                      |+||||||...  ++.+.+.++|++.+++|+.+++.++++++|+|+++     +.++||++||.++..            
T Consensus        79 D~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~-----~~g~iv~isS~~~~~------------  141 (256)
T 2d1y_A           79 DVLVNNAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKV-----GGGAIVNVASVQGLF------------  141 (256)
T ss_dssp             CEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTT-----TCEEEEEECCGGGTS------------
T ss_pred             CEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-----CCcEEEEEccccccC------------
Confidence            99999999764  35677889999999999999999999999999875     468999999988765            


Q ss_pred             CCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCccc
Q 025509          159 DPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIR  210 (251)
Q Consensus       159 ~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~  210 (251)
                         +.++...|++||+++++|+++++.|+++.|  |+||+|+||+++|++..
T Consensus       142 ---~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g--i~v~~v~Pg~v~t~~~~  188 (256)
T 2d1y_A          142 ---AEQENAAYNASKGGLVNLTRSLALDLAPLR--IRVNAVAPGAIATEAVL  188 (256)
T ss_dssp             ---BCTTBHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECSBCCHHHH
T ss_pred             ---CCCCChhHHHHHHHHHHHHHHHHHHHhhcC--eEEEEEeeCCccCchhh
Confidence               567788999999999999999999999989  99999999999999854

>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2

Probab=100.00  E-value=1.5e-36  Score=252.56  Aligned_cols=183  Identities=27%  Similarity=0.327  Sum_probs=165.5

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      |++|||||++|||+++|++|+++|++|++++|+.+++++..+++     +..+.++++|++|.++++++++++.++++++
T Consensus         7 k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~i   81 (253)
T 1hxh_A            7 KVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAEL-----GERSMFVRHDVSSEADWTLVMAAVQRRLGTL   81 (253)
T ss_dssp             CEEEETTTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHH-----CTTEEEECCCTTCHHHHHHHHHHHHHHHCSC
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc-----CCceEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            68999999999999999999999999999999988777766655     4578999999999999999999999999999


Q ss_pred             eEEEEcCCCCC--CCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccccCC
Q 025509           81 NILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKIN  158 (251)
Q Consensus        81 d~lv~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~  158 (251)
                      |+||||||+..  ++.+.+.++|++.+++|+.+++.++++++|.|+++     + ++||++||..+..            
T Consensus        82 d~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~-----~-g~iv~isS~~~~~------------  143 (253)
T 1hxh_A           82 NVLVNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKET-----G-GSIINMASVSSWL------------  143 (253)
T ss_dssp             CEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTT-----C-EEEEEECCGGGTS------------
T ss_pred             CEEEECCCCCCCCCcccCCHHHHHHHHHhhcHHHHHHHHHHHHHHHHc-----C-CEEEEEcchhhcC------------
Confidence            99999999754  35677889999999999999999999999999874     3 8999999988765            


Q ss_pred             CCCCCCcccccchhHHHHHHHHHHHHHHhccC--CCcEEEEEeeCCcccCCcccC
Q 025509          159 DPSGYNGFRAYSQSKLANILHANELARRLKED--GVDITANSVHPGAIATNIIRH  211 (251)
Q Consensus       159 ~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~--g~~i~v~~v~Pg~v~t~~~~~  211 (251)
                         +.++...|++||+++++|+++++.|+.+.  |  |+||+|+||++.|++...
T Consensus       144 ---~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~g--i~v~~v~Pg~v~t~~~~~  193 (253)
T 1hxh_A          144 ---PIEQYAGYSASKAAVSALTRAAALSCRKQGYA--IRVNSIHPDGIYTPMMQA  193 (253)
T ss_dssp             ---CCTTBHHHHHHHHHHHHHHHHHHHHHHHHTCC--EEEEEEEESEECCHHHHH
T ss_pred             ---CCCCCccHHHHHHHHHHHHHHHHHHhhhcCCC--eEEEEEEeCCccCchhhh
Confidence               66778899999999999999999999988  7  999999999999998653

>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2

Probab=100.00  E-value=4e-36  Score=251.79  Aligned_cols=186  Identities=16%  Similarity=0.191  Sum_probs=159.6

Q ss_pred             CEEEEECCC--ChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCC
Q 025509            1 MDIVITGAT--SGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHH   78 (251)
Q Consensus         1 k~vlItG~s--~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g   78 (251)
                      |++|||||+  +|||+++|++|+++|++|++++|+... .+..+++.+..  ..+.++++|+++.++++++++++.++++
T Consensus        15 k~vlITGa~~~~giG~~ia~~l~~~G~~V~~~~r~~~~-~~~~~~~~~~~--~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   91 (271)
T 3ek2_A           15 KRILLTGLLSNRSIAYGIAKACKREGAELAFTYVGDRF-KDRITEFAAEF--GSELVFPCDVADDAQIDALFASLKTHWD   91 (271)
T ss_dssp             CEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSGGG-HHHHHHHHHHT--TCCCEEECCTTCHHHHHHHHHHHHHHCS
T ss_pred             CEEEEeCCCCCCcHHHHHHHHHHHcCCCEEEEecchhh-HHHHHHHHHHc--CCcEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            689999998  999999999999999999999998543 44445555554  3488999999999999999999999999


Q ss_pred             CeeEEEEcCCCCC------CCCc-CCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCC
Q 025509           79 QLNILINNAGIMG------TPFM-LSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEG  151 (251)
Q Consensus        79 ~id~lv~~ag~~~------~~~~-~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~  151 (251)
                      ++|+||||||+..      ++.+ .+.++|+..+++|+.+++.++++++|+|++       .++||++||.++..     
T Consensus        92 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-------~g~iv~isS~~~~~-----  159 (271)
T 3ek2_A           92 SLDGLVHSIGFAPREAIAGDFLDGLTRENFRIAHDISAYSFPALAKAALPMLSD-------DASLLTLSYLGAER-----  159 (271)
T ss_dssp             CEEEEEECCCCCCGGGGSSCTTTTCCHHHHHHHHHHHTTHHHHHHHHHGGGEEE-------EEEEEEEECGGGTS-----
T ss_pred             CCCEEEECCccCccccccCccccccCHHHHHHHHhhhHHHHHHHHHHHHHHhcc-------CceEEEEecccccc-----
Confidence            9999999999753      3444 788999999999999999999999998864       47999999988776     


Q ss_pred             cccccCCCCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCCc
Q 025509          152 IRFDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRHNS  213 (251)
Q Consensus       152 ~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~~~  213 (251)
                                +.+++..|++||+|+++|+++++.|+.++|  |+||+|+||+|+|++.....
T Consensus       160 ----------~~~~~~~Y~asKaa~~~~~~~la~e~~~~g--i~v~~v~PG~v~T~~~~~~~  209 (271)
T 3ek2_A          160 ----------AIPNYNTMGLAKAALEASVRYLAVSLGAKG--VRVNAISAGPIKTLAASGIK  209 (271)
T ss_dssp             ----------BCTTTTHHHHHHHHHHHHHHHHHHHHHTTT--CEEEEEEECCC-----CCCH
T ss_pred             ----------CCCCccchhHHHHHHHHHHHHHHHHHHhcC--cEEEEEecCcccchhhhccc
Confidence                      677888999999999999999999999999  99999999999999987653

>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=100.00  E-value=2.3e-36  Score=254.47  Aligned_cols=188  Identities=26%  Similarity=0.310  Sum_probs=160.9

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhh-CCCCceEEEEecCCCHHHHHHHHHHHHhcCCC
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKE-IPSAKVDAMELDLSSLASVRNFASEYNIQHHQ   79 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~-~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~   79 (251)
                      |++|||||++|||+++|++|+++|++|++++|+++++++..+++.+. ..+.++.++.+|++++++++++++++.+++|+
T Consensus         7 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   86 (278)
T 1spx_A            7 KVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEILSTTLGKFGK   86 (278)
T ss_dssp             CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcccCCCceeEEecccCCHHHHHHHHHHHHHHcCC
Confidence            58999999999999999999999999999999988888877766431 12456889999999999999999999999999


Q ss_pred             eeEEEEcCCCCC--CCCcC----CchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccc-cccccCCc
Q 025509           80 LNILINNAGIMG--TPFML----SKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGH-RLAYHEGI  152 (251)
Q Consensus        80 id~lv~~ag~~~--~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~-~~~~~~~~  152 (251)
                      +|+||||||+..  ++.+.    +.++|++.+++|+.+++.++++++|+|+++      +++||++||.++ ..      
T Consensus        87 id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~------~g~iv~isS~~~~~~------  154 (278)
T 1spx_A           87 LDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRSVIALTKKAVPHLSST------KGEIVNISSIASGLH------  154 (278)
T ss_dssp             CCEEEECCC-------------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH------TCEEEEECCTTSSSS------
T ss_pred             CCEEEECCCCCCCcccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhc------CCeEEEEeccccccc------
Confidence            999999999753  34455    889999999999999999999999999875      389999999876 54      


Q ss_pred             ccccCCCCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccC
Q 025509          153 RFDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  211 (251)
Q Consensus       153 ~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  211 (251)
                               +.++...|++||+++++|+++++.|+++.|  |+||+|+||++.|++...
T Consensus       155 ---------~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g--i~v~~v~Pg~v~t~~~~~  202 (278)
T 1spx_A          155 ---------ATPDFPYYSIAKAAIDQYTRNTAIDLIQHG--IRVNSISPGLVATGFGSA  202 (278)
T ss_dssp             ---------CCTTSHHHHHHHHHHHHHHHHHHHHHGGGT--CEEEEEEECCBCCCC---
T ss_pred             ---------CCCCccHHHHHHHHHHHHHHHHHHHHHhcC--cEEEEEecCcccCccccc
Confidence                     566778999999999999999999999999  999999999999998654

>3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans}

Probab=100.00  E-value=1.1e-36  Score=253.95  Aligned_cols=186  Identities=24%  Similarity=0.230  Sum_probs=157.0

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      |++|||||++|||+++|++|+++|++|++++|+.+..   .+++     +..+.++++|++|.++++++++.+.+ ++++
T Consensus        10 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~---~~~~-----~~~~~~~~~D~~~~~~v~~~~~~~~~-~g~i   80 (257)
T 3tl3_A           10 AVAVVTGGASGLGLATTKRLLDAGAQVVVLDIRGEDV---VADL-----GDRARFAAADVTDEAAVASALDLAET-MGTL   80 (257)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCHHH---HHHT-----CTTEEEEECCTTCHHHHHHHHHHHHH-HSCE
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCchHHH---HHhc-----CCceEEEECCCCCHHHHHHHHHHHHH-hCCC
Confidence            6899999999999999999999999999999965432   2222     56799999999999999999998877 8999


Q ss_pred             eEEEEcCCCCCC------CCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhcc---CCCCceEEEEcCccccccccCC
Q 025509           81 NILINNAGIMGT------PFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARK---SGGEGRIINVSSEGHRLAYHEG  151 (251)
Q Consensus        81 d~lv~~ag~~~~------~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~---~~~~g~iv~vsS~~~~~~~~~~  151 (251)
                      |+||||||+...      ..+.+.++|++.+++|+.+++.++++++|+|++....   .+..|+||++||..+..     
T Consensus        81 d~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~-----  155 (257)
T 3tl3_A           81 RIVVNCAGTGNAIRVLSRDGVFSLAAFRKIVDINLVGSFNVLRLAAERIAKTEPVGPNAEERGVIINTASVAAFD-----  155 (257)
T ss_dssp             EEEEECGGGSHHHHHHHHTCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCC--CCCCSEEEEEECCCC--C-----
T ss_pred             CEEEECCCCCCCcccccccccCCHHHHHHHHHHccHHHHHHHHHHHHHHHHhcccccccCCCcEEEEEcchhhcC-----
Confidence            999999997532      2247889999999999999999999999999872110   02468999999988776     


Q ss_pred             cccccCCCCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCC
Q 025509          152 IRFDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRHN  212 (251)
Q Consensus       152 ~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~~  212 (251)
                                +.+++..|++||+|+++|+++|+.|++++|  |+||+|+||+|+|++....
T Consensus       156 ----------~~~~~~~Y~asKaa~~~~~~~la~e~~~~g--I~vn~v~PG~v~T~~~~~~  204 (257)
T 3tl3_A          156 ----------GQIGQAAYSASKGGVVGMTLPIARDLASHR--IRVMTIAPGLFDTPLLASL  204 (257)
T ss_dssp             ----------CHHHHHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECSBCCTTC---
T ss_pred             ----------CCCCCccHHHHHHHHHHHHHHHHHHhcccC--cEEEEEEecCccChhhhhc
Confidence                      667788999999999999999999999999  9999999999999998764

>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti}

Probab=100.00  E-value=2.9e-36  Score=251.93  Aligned_cols=180  Identities=23%  Similarity=0.287  Sum_probs=159.5

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      |++|||||++|||+++|++|+++|++|++++|+.....           ...+.++++|++|+++++++++++.+++|++
T Consensus        29 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~-----------~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i   97 (260)
T 3un1_A           29 KVVVITGASQGIGAGLVRAYRDRNYRVVATSRSIKPSA-----------DPDIHTVAGDISKPETADRIVREGIERFGRI   97 (260)
T ss_dssp             CEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSCCCCS-----------STTEEEEESCTTSHHHHHHHHHHHHHHHSCC
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChhhcc-----------cCceEEEEccCCCHHHHHHHHHHHHHHCCCC
Confidence            68999999999999999999999999999999865421           3468999999999999999999999999999


Q ss_pred             eEEEEcCCCCC--CCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccccCC
Q 025509           81 NILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKIN  158 (251)
Q Consensus        81 d~lv~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~  158 (251)
                      |+||||||+..  ++.+.+.++|++.+++|+.|++.++++++|+|+++     +.++||++||..+...           
T Consensus        98 D~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~-----~~g~iv~isS~~~~~~-----------  161 (260)
T 3un1_A           98 DSLVNNAGVFLAKPFVEMTQEDYDHNLGVNVAGFFHITQRAAAEMLKQ-----GSGHIVSITTSLVDQP-----------  161 (260)
T ss_dssp             CEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT-----TCEEEEEECCTTTTSC-----------
T ss_pred             CEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc-----CCcEEEEEechhhccC-----------
Confidence            99999999764  35678899999999999999999999999999886     5689999999765431           


Q ss_pred             CCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccC
Q 025509          159 DPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  211 (251)
Q Consensus       159 ~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  211 (251)
                        .+.++...|++||+|+++|+++++.|++++|  |+||+|+||+++|++...
T Consensus       162 --~~~~~~~~Y~~sKaa~~~l~~~la~e~~~~g--I~vn~v~PG~v~t~~~~~  210 (260)
T 3un1_A          162 --MVGMPSALASLTKGGLNAVTRSLAMEFSRSG--VRVNAVSPGVIKTPMHPA  210 (260)
T ss_dssp             --BTTCCCHHHHHHHHHHHHHHHHHHHHTTTTT--EEEEEEEECCBCCTTSCG
T ss_pred             --CCCCccHHHHHHHHHHHHHHHHHHHHhCcCC--eEEEEEeecCCCCCCCCH
Confidence              1334557899999999999999999999999  999999999999999764

>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A*

Probab=100.00  E-value=8.9e-36  Score=251.42  Aligned_cols=186  Identities=17%  Similarity=0.194  Sum_probs=165.0

Q ss_pred             CEEEEECCC--ChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCC
Q 025509            1 MDIVITGAT--SGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHH   78 (251)
Q Consensus         1 k~vlItG~s--~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g   78 (251)
                      |++|||||+  +|||+++|++|+++|++|++++|+.  .++..+++.+..  ..+.++.+|+++.++++++++++.+.++
T Consensus        27 k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~--~~~~~~~l~~~~--~~~~~~~~Dl~~~~~v~~~~~~~~~~~g  102 (280)
T 3nrc_A           27 KKILITGLLSNKSIAYGIAKAMHREGAELAFTYVGQ--FKDRVEKLCAEF--NPAAVLPCDVISDQEIKDLFVELGKVWD  102 (280)
T ss_dssp             CEEEECCCCSTTCHHHHHHHHHHHTTCEEEEEECTT--CHHHHHHHHGGG--CCSEEEECCTTCHHHHHHHHHHHHHHCS
T ss_pred             CEEEEECCCCCCCHHHHHHHHHHHcCCEEEEeeCch--HHHHHHHHHHhc--CCceEEEeecCCHHHHHHHHHHHHHHcC
Confidence            689999988  7899999999999999999999987  445555565554  3588999999999999999999999999


Q ss_pred             CeeEEEEcCCCCCC------CCc-CCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCC
Q 025509           79 QLNILINNAGIMGT------PFM-LSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEG  151 (251)
Q Consensus        79 ~id~lv~~ag~~~~------~~~-~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~  151 (251)
                      ++|+||||||+...      +.+ .+.++|++.+++|+.+++.++++++|+|.++      .++||++||.++..     
T Consensus       103 ~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~------~g~iv~isS~~~~~-----  171 (280)
T 3nrc_A          103 GLDAIVHSIAFAPRDQLEGNFIDCVTREGFSIAHDISAYSFAALAKEGRSMMKNR------NASMVALTYIGAEK-----  171 (280)
T ss_dssp             SCCEEEECCCCCCGGGSSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTT------TCEEEEEECGGGTS-----
T ss_pred             CCCEEEECCccCCCcccCCccccccCHHHHHHHHHHHHHHHHHHHHHHHHHhhcC------CCeEEEEecccccc-----
Confidence            99999999997532      233 7889999999999999999999999999763      68999999988776     


Q ss_pred             cccccCCCCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCCc
Q 025509          152 IRFDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRHNS  213 (251)
Q Consensus       152 ~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~~~  213 (251)
                                +.+++..|++||+|+++|+++++.|++++|  |+||+|+||+|+|++.....
T Consensus       172 ----------~~~~~~~Y~asKaal~~~~~~la~e~~~~g--i~v~~v~PG~v~T~~~~~~~  221 (280)
T 3nrc_A          172 ----------AMPSYNTMGVAKASLEATVRYTALALGEDG--IKVNAVSAGPIKTLAASGIS  221 (280)
T ss_dssp             ----------CCTTTHHHHHHHHHHHHHHHHHHHHHGGGT--CEEEEEEECCCCCSGGGGCT
T ss_pred             ----------CCCCchhhHHHHHHHHHHHHHHHHHHHHcC--cEEEEEeeccccchhhhcCc
Confidence                      677888999999999999999999999999  99999999999999987654

>3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides}

Probab=100.00  E-value=1.4e-36  Score=254.70  Aligned_cols=176  Identities=24%  Similarity=0.279  Sum_probs=159.0

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      |++|||||++|||+++|++|+++|++|++++|+...+             .....+.+|+++.+++.++++++.+++|++
T Consensus        29 k~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~-------------~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~i   95 (266)
T 3uxy_A           29 KVALVTGAAGGIGGAVVTALRAAGARVAVADRAVAGI-------------AADLHLPGDLREAAYADGLPGAVAAGLGRL   95 (266)
T ss_dssp             CEEEESSTTSHHHHHHHHHHHHTTCEEEECSSCCTTS-------------CCSEECCCCTTSHHHHHHHHHHHHHHHSCC
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHH-------------HhhhccCcCCCCHHHHHHHHHHHHHhcCCC
Confidence            6899999999999999999999999999999986542             122445899999999999999999999999


Q ss_pred             eEEEEcCCCCC--CCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccccCC
Q 025509           81 NILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKIN  158 (251)
Q Consensus        81 d~lv~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~  158 (251)
                      |+||||||+..  ++.+.+.++|++.+++|+.|++.++++++|+|+++     +.|+||++||.++..            
T Consensus        96 D~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~-----~~g~iv~isS~~~~~------------  158 (266)
T 3uxy_A           96 DIVVNNAGVISRGRITETTDADWSLSLGVNVEAPFRICRAAIPLMAAA-----GGGAIVNVASCWGLR------------  158 (266)
T ss_dssp             CEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----TCEEEEEECCSBTTB------------
T ss_pred             CEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-----CCcEEEEECCHHhCC------------
Confidence            99999999764  35678899999999999999999999999999886     578999999988776            


Q ss_pred             CCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccC
Q 025509          159 DPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  211 (251)
Q Consensus       159 ~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  211 (251)
                         +.++...|++||+|+++|+++++.|+++.|  |+||+|+||+++|++.+.
T Consensus       159 ---~~~~~~~Y~asKaa~~~l~~~la~e~~~~g--I~vn~v~PG~v~T~~~~~  206 (266)
T 3uxy_A          159 ---PGPGHALYCLTKAALASLTQCMGMDHAPQG--IRINAVCPNEVNTPMLRT  206 (266)
T ss_dssp             ---CCTTBHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEESSBCCHHHHH
T ss_pred             ---CCCCChHHHHHHHHHHHHHHHHHHHhhhcC--cEEEEEeeCCCcchHhhh
Confidence               677888999999999999999999999999  999999999999998653

>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens}

Probab=100.00  E-value=3.1e-36  Score=261.33  Aligned_cols=187  Identities=21%  Similarity=0.278  Sum_probs=165.2

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchh-------HHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHH
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAA-------GKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEY   73 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~-------~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~   73 (251)
                      |++|||||++|||+++|++|+++|++|++++|+.++       +.+..+++.+.  +.++.++++|++|+++++++++++
T Consensus        46 k~vlVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~l~~~l~~~~~~~~~~--g~~~~~~~~Dv~d~~~v~~~~~~~  123 (346)
T 3kvo_A           46 CTVFITGASRGIGKAIALKAAKDGANIVIAAKTAQPHPKLLGTIYTAAEEIEAV--GGKALPCIVDVRDEQQISAAVEKA  123 (346)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHT--TCEEEEEECCTTCHHHHHHHHHHH
T ss_pred             CEEEEeCCChHHHHHHHHHHHHCCCEEEEEECChhhhhhhHHHHHHHHHHHHhc--CCeEEEEEccCCCHHHHHHHHHHH
Confidence            689999999999999999999999999999998764       55666666554  568999999999999999999999


Q ss_pred             HhcCCCeeEEEEcCCCCC--CCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCC
Q 025509           74 NIQHHQLNILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEG  151 (251)
Q Consensus        74 ~~~~g~id~lv~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~  151 (251)
                      .+++|++|+||||||+..  ++.+.+.++|++++++|+.+++.++++++|+|+++     +.++||++||..+...    
T Consensus       124 ~~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~-----~~g~IV~iSS~~~~~~----  194 (346)
T 3kvo_A          124 IKKFGGIDILVNNASAISLTNTLDTPTKRLDLMMNVNTRGTYLASKACIPYLKKS-----KVAHILNISPPLNLNP----  194 (346)
T ss_dssp             HHHHSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHTHHHHHHHHHHHHHHHTTC-----SSCEEEEECCCCCCCG----
T ss_pred             HHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHC-----CCCEEEEECCHHHcCC----
Confidence            999999999999999754  46678899999999999999999999999999875     4689999999876641    


Q ss_pred             cccccCCCCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCc-ccCCccc
Q 025509          152 IRFDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGA-IATNIIR  210 (251)
Q Consensus       152 ~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~-v~t~~~~  210 (251)
                               .+.+++..|++||+|+++|+++|+.|++ .|  |+||+|+||+ +.|++.+
T Consensus       195 ---------~~~~~~~~Y~aSKaal~~l~~~la~e~~-~g--Irvn~v~PG~~i~T~~~~  242 (346)
T 3kvo_A          195 ---------VWFKQHCAYTIAKYGMSMYVLGMAEEFK-GE--IAVNALWPKTAIHTAAMD  242 (346)
T ss_dssp             ---------GGTSSSHHHHHHHHHHHHHHHHHHHHTT-TT--CEEEEEECSBCBCCHHHH
T ss_pred             ---------CCCCCchHHHHHHHHHHHHHHHHHHHhc-CC--cEEEEEeCCCccccHHHH
Confidence                     0256778999999999999999999999 88  9999999995 8998754

>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A*

Probab=100.00  E-value=4.2e-36  Score=252.66  Aligned_cols=188  Identities=20%  Similarity=0.171  Sum_probs=161.5

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEec-CchhHHHHHHHHHhhCCCCceEEEEecCCCH----HHHHHHHHHHHh
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVR-DIAAGKDVKETIVKEIPSAKVDAMELDLSSL----ASVRNFASEYNI   75 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r-~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~----~~i~~~~~~~~~   75 (251)
                      |++|||||++|||+++|++|+++|++|++++| +.+.++++.+++.+.. +..+.++.+|+++.    ++++++++++.+
T Consensus        12 k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   90 (276)
T 1mxh_A           12 PAAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAAR-AGSAVLCKGDLSLSSSLLDCCEDIIDCSFR   90 (276)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHS-TTCEEEEECCCSSSTTHHHHHHHHHHHHHH
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHHhc-CCceEEEeccCCCccccHHHHHHHHHHHHH
Confidence            57999999999999999999999999999999 8888888887776543 35689999999999    999999999999


Q ss_pred             cCCCeeEEEEcCCCCC--CCCcCCc-----------hhhHHHHHHHHHHHHHHHHHHHHHHHHhhc-cCCCCceEEEEcC
Q 025509           76 QHHQLNILINNAGIMG--TPFMLSK-----------DNIELQFATNHLGHFLLTNLLLDTMKKTAR-KSGGEGRIINVSS  141 (251)
Q Consensus        76 ~~g~id~lv~~ag~~~--~~~~~~~-----------~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~-~~~~~g~iv~vsS  141 (251)
                      ++|++|+||||||+..  ++.+.+.           ++|++.+++|+.+++.++++++|+|. ++. .....++||++||
T Consensus        91 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~-~~~~~~~~~g~iv~isS  169 (276)
T 1mxh_A           91 AFGRCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQVAELFGSNAVAPLFLIRAFARRQG-EGGAWRSRNLSVVNLCD  169 (276)
T ss_dssp             HHSCCCEEEECCCCCCCCCSCC-----------CHHHHHHHHHHHHTHHHHHHHHHHHHTC--------CCCEEEEEECC
T ss_pred             hcCCCCEEEECCCCCCCCCccccCcccccccccchHHHHHHHHHhccHHHHHHHHHHHHHHh-cCCCCCCCCcEEEEECc
Confidence            9999999999999753  3456677           89999999999999999999999987 310 0112389999999


Q ss_pred             ccccccccCCcccccCCCCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCC
Q 025509          142 EGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATN  207 (251)
Q Consensus       142 ~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~  207 (251)
                      ..+..               +.++...|++||+++++|+++++.|+++.|  |+||+|+||++.|+
T Consensus       170 ~~~~~---------------~~~~~~~Y~asK~a~~~l~~~la~e~~~~g--i~v~~v~PG~v~t~  218 (276)
T 1mxh_A          170 AMTDL---------------PLPGFCVYTMAKHALGGLTRAAALELAPRH--IRVNAVAPGLSLLP  218 (276)
T ss_dssp             GGGGS---------------CCTTCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEESSBSCC
T ss_pred             hhhcC---------------CCCCCeehHHHHHHHHHHHHHHHHHHhhcC--eEEEEEecCcccCC
Confidence            88776               667788999999999999999999999999  99999999999999

>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0

Probab=100.00  E-value=3.9e-36  Score=256.16  Aligned_cols=202  Identities=27%  Similarity=0.367  Sum_probs=168.4

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCH-HHHHHHHHHHHhcCCC
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSL-ASVRNFASEYNIQHHQ   79 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~-~~i~~~~~~~~~~~g~   79 (251)
                      |++|||||++|||+++|++|+++|++|++++|+..++++..+++.+.. +.++.++.+|+++. ++++++++.+.+++++
T Consensus        13 k~vlITGas~GIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~Dl~~~~~~v~~~~~~~~~~~g~   91 (311)
T 3o26_A           13 RCAVVTGGNKGIGFEICKQLSSNGIMVVLTCRDVTKGHEAVEKLKNSN-HENVVFHQLDVTDPIATMSSLADFIKTHFGK   91 (311)
T ss_dssp             CEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTT-CCSEEEEECCTTSCHHHHHHHHHHHHHHHSS
T ss_pred             cEEEEecCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC-CCceEEEEccCCCcHHHHHHHHHHHHHhCCC
Confidence            589999999999999999999999999999999999999888887654 45799999999998 9999999999999999


Q ss_pred             eeEEEEcCCCCC--------------------------------CCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 025509           80 LNILINNAGIMG--------------------------------TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTA  127 (251)
Q Consensus        80 id~lv~~ag~~~--------------------------------~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~  127 (251)
                      +|+||||||+..                                +..+.+.+++++.+++|+.|++.++++++|+|+++ 
T Consensus        92 iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~-  170 (311)
T 3o26_A           92 LDILVNNAGVAGFSVDADRFKAMISDIGEDSEELVKIYEKPEAQELMSETYELAEECLKINYNGVKSVTEVLIPLLQLS-  170 (311)
T ss_dssp             CCEEEECCCCCSCEECHHHHHHHHHHHCSSTTHHHHHTTSHHHHTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTS-
T ss_pred             CCEEEECCcccccccccchhhhcccccccchhhcchhhcccchhcccccchhhhhhheeeeeehHHHHHHHhhHhhccC-
Confidence            999999999753                                12356788999999999999999999999999875 


Q ss_pred             ccCCCCceEEEEcCccccccccCCc--------------------------cc-ccCCCCCCC-CcccccchhHHHHHHH
Q 025509          128 RKSGGEGRIINVSSEGHRLAYHEGI--------------------------RF-DKINDPSGY-NGFRAYSQSKLANILH  179 (251)
Q Consensus       128 ~~~~~~g~iv~vsS~~~~~~~~~~~--------------------------~~-~~~~~~~~~-~~~~~Y~~sK~a~~~~  179 (251)
                          +.++||++||..+..+.....                          .+ .......++ ++...|++||+|+++|
T Consensus       171 ----~~~~IV~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~  246 (311)
T 3o26_A          171 ----DSPRIVNVSSSTGSLKYVSNETALEILGDGDALTEERIDMVVNMLLKDFKENLIETNGWPSFGAAYTTSKACLNAY  246 (311)
T ss_dssp             ----SSCEEEEECCGGGSGGGCCCHHHHHHHHCGGGCCHHHHHHHHHHHHHHHHTTCTTTTTCCSSCHHHHHHHHHHHHH
T ss_pred             ----CCCeEEEEecCCcccccccchhhhhhhccccccchhHHHHHHHHHHhhhhccccccccCcccchhhHHHHHHHHHH
Confidence                468999999988766431110                          00 001111223 3557899999999999


Q ss_pred             HHHHHHHhccCCCcEEEEEeeCCcccCCcccCC
Q 025509          180 ANELARRLKEDGVDITANSVHPGAIATNIIRHN  212 (251)
Q Consensus       180 ~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~~  212 (251)
                      +++|+.++.+    |+||+|+||+|.|+|.+..
T Consensus       247 ~~~la~e~~~----i~v~~v~PG~v~T~~~~~~  275 (311)
T 3o26_A          247 TRVLANKIPK----FQVNCVCPGLVKTEMNYGI  275 (311)
T ss_dssp             HHHHHHHCTT----SEEEEECCCSBCSGGGTTC
T ss_pred             HHHHHhhcCC----ceEEEecCCceecCCcCCC
Confidence            9999999963    8999999999999997754

>2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2

Probab=100.00  E-value=1.5e-35  Score=244.79  Aligned_cols=188  Identities=24%  Similarity=0.321  Sum_probs=169.1

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCC-------EEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHH
Q 025509            1 MDIVITGATSGIGTETARVLALRGV-------HVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEY   73 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~-------~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~   73 (251)
                      |++|||||++|||++++++|+++|+       +|++++|+.+.++++.+++.+.  +.++.++.+|++++++++++++++
T Consensus         3 k~vlITGasggiG~~la~~l~~~G~~~~~~~~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~v~~~~~~~   80 (244)
T 2bd0_A            3 HILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAE--GALTDTITADISDMADVRRLTTHI   80 (244)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHTT--TCEEEEEECCTTSHHHHHHHHHHH
T ss_pred             CEEEEECCCChHHHHHHHHHHHhcCcccccceEEEEEeCCHHHHHHHHHHHHcc--CCeeeEEEecCCCHHHHHHHHHHH
Confidence            5799999999999999999999999       9999999988888777776543  467899999999999999999999


Q ss_pred             HhcCCCeeEEEEcCCCCC--CCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCC
Q 025509           74 NIQHHQLNILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEG  151 (251)
Q Consensus        74 ~~~~g~id~lv~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~  151 (251)
                      .++++++|+||||||...  ++.+.+.++|++.+++|+.+++.++++++|+|+++     +.++||++||..+..     
T Consensus        81 ~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-----~~~~iv~isS~~~~~-----  150 (244)
T 2bd0_A           81 VERYGHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQ-----HSGHIFFITSVAATK-----  150 (244)
T ss_dssp             HHHTSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----TCEEEEEECCGGGTS-----
T ss_pred             HHhCCCCCEEEEcCCcCCcCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhC-----CCCEEEEEecchhcC-----
Confidence            999999999999999753  34567889999999999999999999999999875     468999999988765     


Q ss_pred             cccccCCCCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCC
Q 025509          152 IRFDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRHN  212 (251)
Q Consensus       152 ~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~~  212 (251)
                                +.++...|++||+++++|+++++.|+.+.|  |++++|+||++.|++....
T Consensus       151 ----------~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g--i~v~~v~Pg~v~t~~~~~~  199 (244)
T 2bd0_A          151 ----------AFRHSSIYCMSKFGQRGLVETMRLYARKCN--VRITDVQPGAVYTPMWGKV  199 (244)
T ss_dssp             ----------CCTTCHHHHHHHHHHHHHHHHHHHHHTTTT--EEEEEEEECCBCSTTTCCC
T ss_pred             ----------CCCCCchhHHHHHHHHHHHHHHHHHhhccC--cEEEEEECCCccchhhhhc
Confidence                      566778999999999999999999999999  9999999999999997653

>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*

Probab=100.00  E-value=7.1e-36  Score=251.35  Aligned_cols=185  Identities=16%  Similarity=0.143  Sum_probs=163.5

Q ss_pred             CEEEEECCC--ChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCC
Q 025509            1 MDIVITGAT--SGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHH   78 (251)
Q Consensus         1 k~vlItG~s--~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g   78 (251)
                      |++|||||+  +|||+++|++|+++|++|++++|+.+ .++..+++.+..+  .+.++++|++++++++++++++.+++|
T Consensus         7 k~vlVTGas~~~gIG~~~a~~l~~~G~~V~~~~r~~~-~~~~~~~l~~~~~--~~~~~~~D~~~~~~v~~~~~~~~~~~g   83 (275)
T 2pd4_A            7 KKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNES-LEKRVRPIAQELN--SPYVYELDVSKEEHFKSLYNSVKKDLG   83 (275)
T ss_dssp             CEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESSTT-THHHHHHHHHHTT--CCCEEECCTTCHHHHHHHHHHHHHHTS
T ss_pred             CEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEeCCHH-HHHHHHHHHHhcC--CcEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            589999999  99999999999999999999999875 4555555655442  378899999999999999999999999


Q ss_pred             CeeEEEEcCCCCC------CCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCc
Q 025509           79 QLNILINNAGIMG------TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGI  152 (251)
Q Consensus        79 ~id~lv~~ag~~~------~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~  152 (251)
                      ++|+||||||+..      ++.+.+.++|+..+++|+.+++.++++++|+|++       .|+||++||.++..      
T Consensus        84 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~-------~g~iv~isS~~~~~------  150 (275)
T 2pd4_A           84 SLDFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVYSLIELTNTLKPLLNN-------GASVLTLSYLGSTK------  150 (275)
T ss_dssp             CEEEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE-------EEEEEEEECGGGTS------
T ss_pred             CCCEEEECCccCccccCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhcc-------CCEEEEEecchhcC------
Confidence            9999999999753      3457788999999999999999999999999853       47999999987765      


Q ss_pred             ccccCCCCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCC
Q 025509          153 RFDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRHN  212 (251)
Q Consensus       153 ~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~~  212 (251)
                               +.+++..|++||+|+++|+++++.|+++.|  |+||+|+||+++|++.+..
T Consensus       151 ---------~~~~~~~Y~asK~a~~~~~~~la~e~~~~g--i~v~~v~PG~v~T~~~~~~  199 (275)
T 2pd4_A          151 ---------YMAHYNVMGLAKAALESAVRYLAVDLGKHH--IRVNALSAGPIRTLASSGI  199 (275)
T ss_dssp             ---------BCTTCHHHHHHHHHHHHHHHHHHHHHHTTT--CEEEEEEECCCCCTTGGGS
T ss_pred             ---------CCCCchhhHHHHHHHHHHHHHHHHHhhhcC--eEEEEEeeCccccchhhhc
Confidence                     567778999999999999999999999999  9999999999999987643

>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0

Probab=100.00  E-value=1.6e-35  Score=245.50  Aligned_cols=181  Identities=28%  Similarity=0.372  Sum_probs=149.1

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      |++|||||++|||+++|++|+++|++|++++|+.+++++..+++     ...+.++.+|+++.+++.+++++    .+++
T Consensus        15 k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~~~~~~~~----~~~i   85 (249)
T 3f9i_A           15 KTSLITGASSGIGSAIARLLHKLGSKVIISGSNEEKLKSLGNAL-----KDNYTIEVCNLANKEECSNLISK----TSNL   85 (249)
T ss_dssp             CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH-----CSSEEEEECCTTSHHHHHHHHHT----CSCC
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHh-----ccCccEEEcCCCCHHHHHHHHHh----cCCC
Confidence            68999999999999999999999999999999988888777666     45788999999999999887764    3689


Q ss_pred             eEEEEcCCCCCC--CCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccccCC
Q 025509           81 NILINNAGIMGT--PFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKIN  158 (251)
Q Consensus        81 d~lv~~ag~~~~--~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~  158 (251)
                      |+||||||+...  ..+.+.++|++.+++|+.+++.++++++|+|.++     +.++||++||.++..            
T Consensus        86 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~-----~~g~iv~isS~~~~~------------  148 (249)
T 3f9i_A           86 DILVCNAGITSDTLAIRMKDQDFDKVIDINLKANFILNREAIKKMIQK-----RYGRIINISSIVGIA------------  148 (249)
T ss_dssp             SEEEECCC-------------CHHHHHHHHTHHHHHHHHHHHHHHHHH-----TCEEEEEECCCCC--------------
T ss_pred             CEEEECCCCCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-----CCcEEEEEccHHhcc------------
Confidence            999999997643  4567889999999999999999999999999886     568999999988776            


Q ss_pred             CCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCC
Q 025509          159 DPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRHN  212 (251)
Q Consensus       159 ~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~~  212 (251)
                         +.++...|++||+|+++|+++++.|+.++|  |+||+|+||++.|++....
T Consensus       149 ---~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g--i~v~~v~PG~v~t~~~~~~  197 (249)
T 3f9i_A          149 ---GNPGQANYCASKAGLIGMTKSLSYEVATRG--ITVNAVAPGFIKSDMTDKL  197 (249)
T ss_dssp             ---CCSCSHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECCBC------C
T ss_pred             ---CCCCCchhHHHHHHHHHHHHHHHHHHHHcC--cEEEEEecCccccCccccc
Confidence               677888999999999999999999999999  9999999999999998764

>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens}

Probab=100.00  E-value=5.7e-36  Score=250.24  Aligned_cols=185  Identities=25%  Similarity=0.352  Sum_probs=163.7

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      |++|||||++|||+++|++|+++|++|++++|+++++++..+++     ...+.++++|++|.++++++++++.+++|++
T Consensus        13 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~D~~d~~~v~~~~~~~~~~~g~i   87 (263)
T 3ak4_A           13 RKAIVTGGSKGIGAAIARALDKAGATVAIADLDVMAAQAVVAGL-----ENGGFAVEVDVTKRASVDAAMQKAIDALGGF   87 (263)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTC-----TTCCEEEECCTTCHHHHHHHHHHHHHHHTCC
T ss_pred             CEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH-----hcCCeEEEEeCCCHHHHHHHHHHHHHHcCCC
Confidence            58999999999999999999999999999999987766554433     2367889999999999999999999999999


Q ss_pred             eEEEEcCCCCC--CCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccccCC
Q 025509           81 NILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKIN  158 (251)
Q Consensus        81 d~lv~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~  158 (251)
                      |+||||||+..  ++.+.+.++|+..+++|+.+++.++++++|+|.++.    ..++||++||..+..            
T Consensus        88 D~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~----~~g~iv~isS~~~~~------------  151 (263)
T 3ak4_A           88 DLLCANAGVSTMRPAVDITDEEWDFNFDVNARGVFLANQIACRHFLASN----TKGVIVNTASLAAKV------------  151 (263)
T ss_dssp             CEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT----CCCEEEEECCGGGTS------------
T ss_pred             CEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC----CCeEEEEeccccccc------------
Confidence            99999999753  356778899999999999999999999999998751    158999999988765            


Q ss_pred             CCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccC
Q 025509          159 DPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  211 (251)
Q Consensus       159 ~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  211 (251)
                         +.+....|++||+++++|+++++.|+.+.|  |+||+|+||+++|++...
T Consensus       152 ---~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g--i~v~~v~Pg~v~t~~~~~  199 (263)
T 3ak4_A          152 ---GAPLLAHYSASKFAVFGWTQALAREMAPKN--IRVNCVCPGFVKTAMQER  199 (263)
T ss_dssp             ---CCTTCHHHHHHHHHHHHHHHHHHHHHGGGT--CEEEEEEECSBTTHHHHH
T ss_pred             ---CCCCchhHHHHHHHHHHHHHHHHHHHhHcC--eEEEEEecccccChhhhh
Confidence               566778999999999999999999999989  999999999999998653

>3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} SCOP: c.2.1.0 PDB: 3gdf_A

Probab=100.00  E-value=1.3e-35  Score=248.49  Aligned_cols=190  Identities=23%  Similarity=0.274  Sum_probs=166.6

Q ss_pred             CEEEEECCC--ChhHHHHHHHHHHcCCEEEEEecCchhH-HHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcC
Q 025509            1 MDIVITGAT--SGIGTETARVLALRGVHVVMGVRDIAAG-KDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQH   77 (251)
Q Consensus         1 k~vlItG~s--~gIG~a~a~~l~~~G~~Vi~~~r~~~~~-~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~   77 (251)
                      |++|||||+  +|||+++|++|+++|++|++++|+.... ++..+++.+.. +.++.++++|++++++++++++++.+++
T Consensus        21 k~vlITGas~~~giG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   99 (267)
T 3gdg_A           21 KVVVVTGASGPKGMGIEAARGCAEMGAAVAITYASRAQGAEENVKELEKTY-GIKAKAYKCQVDSYESCEKLVKDVVADF   99 (267)
T ss_dssp             CEEEETTCCSSSSHHHHHHHHHHHTSCEEEECBSSSSSHHHHHHHHHHHHH-CCCEECCBCCTTCHHHHHHHHHHHHHHT
T ss_pred             CEEEEECCCCCCChHHHHHHHHHHCCCeEEEEeCCcchhHHHHHHHHHHhc-CCceeEEecCCCCHHHHHHHHHHHHHHc
Confidence            689999999  9999999999999999999999876655 66666666544 5679999999999999999999999999


Q ss_pred             CCeeEEEEcCCCCC--CCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccc
Q 025509           78 HQLNILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFD  155 (251)
Q Consensus        78 g~id~lv~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~  155 (251)
                      +++|+||||||+..  ++.+.+.++|++.+++|+.+++.++++++|+|+++     +.++||++||..+...        
T Consensus       100 g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-----~~g~iv~isS~~~~~~--------  166 (267)
T 3gdg_A          100 GQIDAFIANAGATADSGILDGSVEAWNHVVQVDLNGTFHCAKAVGHHFKER-----GTGSLVITASMSGHIA--------  166 (267)
T ss_dssp             SCCSEEEECCCCCCCSCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----TCCEEEEECCGGGTSC--------
T ss_pred             CCCCEEEECCCcCCCCCcccCCHHHHHHHHHhcchHHHHHHHHHHHHHHHc-----CCceEEEEcccccccc--------
Confidence            99999999999764  35678899999999999999999999999999886     4689999999887652        


Q ss_pred             cCCCCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCC
Q 025509          156 KINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRHN  212 (251)
Q Consensus       156 ~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~~  212 (251)
                           ...++...|++||+|+++|+++++.|+++.   |+||+|+||+++|++.+..
T Consensus       167 -----~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~---i~v~~v~PG~v~t~~~~~~  215 (267)
T 3gdg_A          167 -----NFPQEQTSYNVAKAGCIHMARSLANEWRDF---ARVNSISPGYIDTGLSDFV  215 (267)
T ss_dssp             -----CSSSCCHHHHHHHHHHHHHHHHHHHHTTTT---CEEEEEEECCEECSCGGGS
T ss_pred             -----CCCCCCCcchHHHHHHHHHHHHHHHHhccC---cEEEEEECCccccchhhhC
Confidence                 012467799999999999999999999764   8999999999999998754

>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus}

Probab=100.00  E-value=2.5e-36  Score=247.68  Aligned_cols=181  Identities=20%  Similarity=0.188  Sum_probs=154.6

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      |++|||||++|||+++|++|+++|++|++++|+++++++..+++     +.++.++.+|+++.++++++++++.+.   +
T Consensus         2 k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~v~~~~~~~~~~---~   73 (230)
T 3guy_A            2 SLIVITGASSGLGAELAKLYDAEGKATYLTGRSESKLSTVTNCL-----SNNVGYRARDLASHQEVEQLFEQLDSI---P   73 (230)
T ss_dssp             -CEEEESTTSHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHTC-----SSCCCEEECCTTCHHHHHHHHHSCSSC---C
T ss_pred             CEEEEecCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH-----hhccCeEeecCCCHHHHHHHHHHHhhc---C
Confidence            57999999999999999999999999999999988877766544     567899999999999999999877543   3


Q ss_pred             eEEEEcCCCCC--CCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccccCC
Q 025509           81 NILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKIN  158 (251)
Q Consensus        81 d~lv~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~  158 (251)
                      |+||||||...  ++.+.+.++|++.+++|+.+++.++++++|+|+++      +++||++||..+..            
T Consensus        74 d~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~------~~~iv~isS~~~~~------------  135 (230)
T 3guy_A           74 STVVHSAGSGYFGLLQEQDPEQIQTLIENNLSSAINVLRELVKRYKDQ------PVNVVMIMSTAAQQ------------  135 (230)
T ss_dssp             SEEEECCCCCCCSCGGGSCHHHHHHHHHHHHHHHHHHHHHHHHHHTTS------CCEEEEECCGGGTS------------
T ss_pred             CEEEEeCCcCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhC------CCeEEEEeecccCC------------
Confidence            99999999754  35678899999999999999999999999999774      45999999988776            


Q ss_pred             CCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCC
Q 025509          159 DPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRHN  212 (251)
Q Consensus       159 ~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~~  212 (251)
                         +.++...|++||+|+++|+++++.|++++|  |+||+|+||++.|++.+..
T Consensus       136 ---~~~~~~~Y~asKaa~~~~~~~la~e~~~~g--i~v~~v~PG~v~t~~~~~~  184 (230)
T 3guy_A          136 ---PKAQESTYCAVKWAVKGLIESVRLELKGKP--MKIIAVYPGGMATEFWETS  184 (230)
T ss_dssp             ---CCTTCHHHHHHHHHHHHHHHHHHHHTTTSS--CEEEEEEECCC--------
T ss_pred             ---CCCCCchhHHHHHHHHHHHHHHHHHHHhcC--eEEEEEECCcccChHHHhc
Confidence               677888999999999999999999999999  9999999999999997653

>2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus}

Probab=100.00  E-value=1.9e-35  Score=250.03  Aligned_cols=185  Identities=17%  Similarity=0.172  Sum_probs=162.1

Q ss_pred             CEEEEECCC--ChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCC
Q 025509            1 MDIVITGAT--SGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHH   78 (251)
Q Consensus         1 k~vlItG~s--~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g   78 (251)
                      |++|||||+  +|||+++|++|+++|++|++++|+.+ .++..+++.+..+  .+.++++|+++.++++++++++.+++|
T Consensus        22 k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~-~~~~~~~l~~~~~--~~~~~~~Dl~~~~~v~~~~~~~~~~~g   98 (285)
T 2p91_A           22 KRALITGVANERSIAYGIAKSFHREGAQLAFTYATPK-LEKRVREIAKGFG--SDLVVKCDVSLDEDIKNLKKFLEENWG   98 (285)
T ss_dssp             CEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEESSGG-GHHHHHHHHHHTT--CCCEEECCTTCHHHHHHHHHHHHHHTS
T ss_pred             CEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCCHH-HHHHHHHHHHhcC--CeEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            579999999  99999999999999999999999875 4555555655442  378899999999999999999999999


Q ss_pred             CeeEEEEcCCCCC------CCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCc
Q 025509           79 QLNILINNAGIMG------TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGI  152 (251)
Q Consensus        79 ~id~lv~~ag~~~------~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~  152 (251)
                      ++|+||||||+..      ++.+.+.++|++.+++|+.+++.++++++|+|.++      .|+||++||.++..      
T Consensus        99 ~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~------~g~iv~isS~~~~~------  166 (285)
T 2p91_A           99 SLDIIVHSIAYAPKEEFKGGVIDTSREGFKIAMDISVYSLIALTRELLPLMEGR------NGAIVTLSYYGAEK------  166 (285)
T ss_dssp             CCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGGTTS------CCEEEEEECGGGTS------
T ss_pred             CCCEEEECCCCCCcccCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc------CCEEEEEccchhcc------
Confidence            9999999999753      34577889999999999999999999999998652      58999999987765      


Q ss_pred             ccccCCCCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccC
Q 025509          153 RFDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  211 (251)
Q Consensus       153 ~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  211 (251)
                               +.+++..|++||+|+++|+++++.|+++.|  |+||+|+||+++|++...
T Consensus       167 ---------~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g--i~v~~v~PG~v~t~~~~~  214 (285)
T 2p91_A          167 ---------VVPHYNVMGIAKAALESTVRYLAYDIAKHG--HRINAISAGPVKTLAAYS  214 (285)
T ss_dssp             ---------BCTTTTHHHHHHHHHHHHHHHHHHHHHTTT--CEEEEEEECCCCCSCC--
T ss_pred             ---------CCCCccHHHHHHHHHHHHHHHHHHHhcccC--cEEEEEEeCcccCchhhc
Confidence                     566778999999999999999999999999  999999999999998764

>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2

Probab=100.00  E-value=5.3e-36  Score=251.62  Aligned_cols=181  Identities=27%  Similarity=0.360  Sum_probs=162.2

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      |++|||||++|||+++|++|+++|++|++++|+++.+++..+++      ..+.++++|++|.++++++++++.+++|++
T Consensus        10 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~------~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i   83 (270)
T 1yde_A           10 KVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQEL------PGAVFILCDVTQEDDVKTLVSETIRRFGRL   83 (270)
T ss_dssp             CEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHC------TTEEEEECCTTSHHHHHHHHHHHHHHHSCC
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh------cCCeEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence            58999999999999999999999999999999987766654433      237889999999999999999999999999


Q ss_pred             eEEEEcCCCCC---CCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccccC
Q 025509           81 NILINNAGIMG---TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKI  157 (251)
Q Consensus        81 d~lv~~ag~~~---~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~  157 (251)
                      |+||||||...   ++.+.+.++|++.+++|+.+++.++++++|+|+++      .++||++||..+..           
T Consensus        84 D~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~------~g~iv~isS~~~~~-----------  146 (270)
T 1yde_A           84 DCVVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKS------QGNVINISSLVGAI-----------  146 (270)
T ss_dssp             CEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH------TCEEEEECCHHHHH-----------
T ss_pred             CEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHC------CCEEEEEcCccccC-----------
Confidence            99999999753   35577889999999999999999999999999764      58999999988776           


Q ss_pred             CCCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCccc
Q 025509          158 NDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIR  210 (251)
Q Consensus       158 ~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~  210 (251)
                          +.+....|+++|+++++|+++++.|+++.|  |+||+|+||++.|++..
T Consensus       147 ----~~~~~~~Y~asKaa~~~~~~~la~e~~~~g--i~vn~v~Pg~v~t~~~~  193 (270)
T 1yde_A          147 ----GQAQAVPYVATKGAVTAMTKALALDESPYG--VRVNCISPGNIWTPLWE  193 (270)
T ss_dssp             ----CCTTCHHHHHHHHHHHHHHHHHHHHHGGGT--CEEEEEEECSBCCHHHH
T ss_pred             ----CCCCCcccHHHHHHHHHHHHHHHHHhhhhC--cEEEEEEeCccccchhh
Confidence                566778999999999999999999999999  99999999999999864

>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus}

Probab=100.00  E-value=3.3e-35  Score=243.39  Aligned_cols=188  Identities=27%  Similarity=0.315  Sum_probs=166.8

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      |++|||||++|||+++|++|+++|++|++++|+.+++++..+++.+.. +.++.++.+|++++++++++++++.++++++
T Consensus         3 k~vlItGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   81 (250)
T 2cfc_A            3 RVAIVTGASSGNGLAIATRFLARGDRVAALDLSAETLEETARTHWHAY-ADKVLRVRADVADEGDVNAAIAATMEQFGAI   81 (250)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHSTTT-GGGEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhc-CCcEEEEEecCCCHHHHHHHHHHHHHHhCCC
Confidence            689999999999999999999999999999999888777766652222 3568999999999999999999999999999


Q ss_pred             eEEEEcCCCCCC-----CCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccc
Q 025509           81 NILINNAGIMGT-----PFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFD  155 (251)
Q Consensus        81 d~lv~~ag~~~~-----~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~  155 (251)
                      |+||||||....     +.+.+.++|++.+++|+.+++.++++++|.|+++     +.++||++||..+..         
T Consensus        82 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-----~~~~iv~isS~~~~~---------  147 (250)
T 2cfc_A           82 DVLVNNAGITGNSEAGVLHTTPVEQFDKVMAVNVRGIFLGCRAVLPHMLLQ-----GAGVIVNIASVASLV---------  147 (250)
T ss_dssp             CEEEECCCCCCCTTCCSGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----TCEEEEEECCGGGTS---------
T ss_pred             CEEEECCCCCCCCCcchhhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhC-----CCCEEEEECChhhcc---------
Confidence            999999997532     4466889999999999999999999999999886     468999999988765         


Q ss_pred             cCCCCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccC
Q 025509          156 KINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  211 (251)
Q Consensus       156 ~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  211 (251)
                            +.++...|+++|++++.|+++++.|+.+.|  |++++|+||++.|++...
T Consensus       148 ------~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~g--i~v~~v~Pg~v~t~~~~~  195 (250)
T 2cfc_A          148 ------AFPGRSAYTTSKGAVLQLTKSVAVDYAGSG--IRCNAVCPGMIETPMTQW  195 (250)
T ss_dssp             ------CCTTCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECSBCSTTTHH
T ss_pred             ------CCCCchhHHHHHHHHHHHHHHHHHHhcccC--eEEEEEEeCcCccCcccc
Confidence                  566788999999999999999999999888  999999999999998653

>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium}

Probab=100.00  E-value=2.9e-35  Score=248.24  Aligned_cols=189  Identities=20%  Similarity=0.271  Sum_probs=166.2

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      |++|||||++|||+++|++|+++|++|++++|+.+++++..+++     +..+.++++|+++.++++++++++ ++++++
T Consensus        31 k~vlVTGas~GIG~aia~~l~~~G~~Vi~~~r~~~~~~~~~~~~-----~~~~~~~~~Dl~~~~~v~~~~~~~-~~~~~i  104 (281)
T 3ppi_A           31 ASAIVSGGAGGLGEATVRRLHADGLGVVIADLAAEKGKALADEL-----GNRAEFVSTNVTSEDSVLAAIEAA-NQLGRL  104 (281)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH-----CTTEEEEECCTTCHHHHHHHHHHH-TTSSEE
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHh-----CCceEEEEcCCCCHHHHHHHHHHH-HHhCCC
Confidence            57999999999999999999999999999999998888877766     567999999999999999999999 788999


Q ss_pred             eEEEEc-CCCCCC--C-----CcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhcc-CCCCceEEEEcCccccccccCC
Q 025509           81 NILINN-AGIMGT--P-----FMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARK-SGGEGRIINVSSEGHRLAYHEG  151 (251)
Q Consensus        81 d~lv~~-ag~~~~--~-----~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~-~~~~g~iv~vsS~~~~~~~~~~  151 (251)
                      |++||| ||+...  .     .+.+.++|++.+++|+.+++.++++++|.+.+.... .+..|+||++||..+..     
T Consensus       105 d~lv~~aag~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~-----  179 (281)
T 3ppi_A          105 RYAVVAHGGFGVAQRIVQRDGSPADMGGFTKTIDLYLNGTYNVARLVAASIAAAEPRENGERGALVLTASIAGYE-----  179 (281)
T ss_dssp             EEEEECCCCCCCCCCSBCTTSCBCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSCCCTTSCCEEEEEECCGGGTS-----
T ss_pred             CeEEEccCcccccccccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcccccCCCeEEEEEecccccC-----
Confidence            999999 554322  2     256788999999999999999999999999863211 12468999999998876     


Q ss_pred             cccccCCCCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCC
Q 025509          152 IRFDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRHN  212 (251)
Q Consensus       152 ~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~~  212 (251)
                                +.++...|++||+|+++|+++|+.|+.+.|  |+||+|+||+|.|++....
T Consensus       180 ----------~~~~~~~Y~asKaa~~~~~~~la~e~~~~g--i~v~~v~PG~v~T~~~~~~  228 (281)
T 3ppi_A          180 ----------GQIGQTAYAAAKAGVIGLTIAAARDLSSAG--IRVNTIAPGTMKTPIMESV  228 (281)
T ss_dssp             ----------CCTTCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECSBCCHHHHTT
T ss_pred             ----------CCCCCcccHHHHHHHHHHHHHHHHHHhhcC--eEEEEEecCcCCchhhhcc
Confidence                      677888999999999999999999999999  9999999999999998764

>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis}

Probab=100.00  E-value=2.6e-36  Score=256.03  Aligned_cols=191  Identities=46%  Similarity=0.685  Sum_probs=161.5

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      |++|||||++|||+++|++|+++|++|++++|+..++++..+++     +.++.++++|++|.++++++++++    +++
T Consensus        17 k~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~Dl~d~~~v~~~~~~~----~~i   87 (291)
T 3rd5_A           17 RTVVITGANSGLGAVTARELARRGATVIMAVRDTRKGEAAARTM-----AGQVEVRELDLQDLSSVRRFADGV----SGA   87 (291)
T ss_dssp             CEEEEECCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHTTS-----SSEEEEEECCTTCHHHHHHHHHTC----CCE
T ss_pred             CEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh-----cCCeeEEEcCCCCHHHHHHHHHhc----CCC
Confidence            68999999999999999999999999999999988877665544     568999999999999999988865    689


Q ss_pred             eEEEEcCCCCCCCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccccCC-C
Q 025509           81 NILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKIN-D  159 (251)
Q Consensus        81 d~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~-~  159 (251)
                      |+||||||+..+..+.+.++|+..+++|+.+++.++++++|++.+         +||++||.++..+..   .+.+.. .
T Consensus        88 D~lv~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~---------riv~isS~~~~~~~~---~~~~~~~~  155 (291)
T 3rd5_A           88 DVLINNAGIMAVPYALTVDGFESQIGTNHLGHFALTNLLLPRLTD---------RVVTVSSMAHWPGRI---NLEDLNWR  155 (291)
T ss_dssp             EEEEECCCCCSCCCCBCTTSCBHHHHHHTHHHHHHHHHHGGGEEE---------EEEEECCGGGTTCCC---CSSCTTCS
T ss_pred             CEEEECCcCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHh---------heeEeechhhccCCC---Cccccccc
Confidence            999999998776667788999999999999999999999999853         899999988765322   121121 1


Q ss_pred             CCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCC
Q 025509          160 PSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRHN  212 (251)
Q Consensus       160 ~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~~  212 (251)
                      ..+.++...|++||+|+++|+++++.|+.++|.+|+||+|+||+|+|++.+..
T Consensus       156 ~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~PG~v~T~~~~~~  208 (291)
T 3rd5_A          156 SRRYSPWLAYSQSKLANLLFTSELQRRLTAAGSPLRALAAHPGYSHTNLQGAS  208 (291)
T ss_dssp             SSCCCHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEECCSGGGSCC----
T ss_pred             ccCCCCcchHHHHHHHHHHHHHHHHHHHhhCCCCEEEEEeeCCCCcccccccc
Confidence            24566778999999999999999999999888779999999999999998764

>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str}

Probab=100.00  E-value=7.7e-36  Score=248.01  Aligned_cols=187  Identities=27%  Similarity=0.337  Sum_probs=165.5

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEE-ecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcC--
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMG-VRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQH--   77 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~-~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~--   77 (251)
                      |++|||||++|||+++|++|+++|++|+++ +|+.+.+++..+++.+.  +..+.++.+|+++.++++++++++.+.+  
T Consensus         8 k~vlITGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   85 (255)
T 3icc_A            8 KVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSN--GGSAFSIGANLESLHGVEALYSSLDNELQN   85 (255)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCSHHHHHHHHHHHHT--TCEEEEEECCTTSHHHHHHHHHHHHHHHHH
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHHHhc--CCceEEEecCcCCHHHHHHHHHHHHHHhcc
Confidence            689999999999999999999999999885 67777788887777665  5678999999999999999999887655  


Q ss_pred             ----CCeeEEEEcCCCCCC--CCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCC
Q 025509           78 ----HQLNILINNAGIMGT--PFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEG  151 (251)
Q Consensus        78 ----g~id~lv~~ag~~~~--~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~  151 (251)
                          +++|+||||||+...  ..+.+.++|++++++|+.+++.++++++|+|++       .++||++||.++..     
T Consensus        86 ~~~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~-------~~~iv~isS~~~~~-----  153 (255)
T 3icc_A           86 RTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRD-------NSRIINISSAATRI-----  153 (255)
T ss_dssp             HHSSSCEEEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEE-------EEEEEEECCGGGTS-----
T ss_pred             cccCCcccEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHhhCC-------CCEEEEeCChhhcc-----
Confidence                359999999997643  556788999999999999999999999999833       57999999988876     


Q ss_pred             cccccCCCCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCCc
Q 025509          152 IRFDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRHNS  213 (251)
Q Consensus       152 ~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~~~  213 (251)
                                +.+.+..|++||+|+++|+++++.|+.++|  |+||+|+||+++|++.....
T Consensus       154 ----------~~~~~~~Y~asKaa~~~~~~~la~e~~~~g--i~v~~v~PG~v~t~~~~~~~  203 (255)
T 3icc_A          154 ----------SLPDFIAYSMTKGAINTMTFTLAKQLGARG--ITVNAILPGFVKTDMNAELL  203 (255)
T ss_dssp             ----------CCTTBHHHHHHHHHHHHHHHHHHHHHGGGT--CEEEEEEECCBCCSSSTTTT
T ss_pred             ----------CCCCcchhHHhHHHHHHHHHHHHHHHHhcC--eEEEEEEEeeecccchhhhc
Confidence                      677889999999999999999999999999  99999999999999987653

>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2

Probab=100.00  E-value=7.2e-36  Score=249.90  Aligned_cols=182  Identities=24%  Similarity=0.290  Sum_probs=158.7

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      |++|||||++|||+++|++|+++|++|++++|+++++++..+++     ..++.++++|++|.++++++++++.+++|++
T Consensus         7 k~vlITGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~i   81 (263)
T 2a4k_A            7 KTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAAL-----EAEAIAVVADVSDPKAVEAVFAEALEEFGRL   81 (263)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTC-----CSSEEEEECCTTSHHHHHHHHHHHHHHHSCC
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-----cCceEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence            68999999999999999999999999999999987766655433     3568899999999999999999999999999


Q ss_pred             eEEEEcCCCCC--CCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccccCC
Q 025509           81 NILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKIN  158 (251)
Q Consensus        81 d~lv~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~  158 (251)
                      |+||||||+..  +..+.+.++|++.+++|+.+++.++++++|+| ++      .++||++||.++.             
T Consensus        82 D~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~-~~------~g~iv~isS~~~~-------------  141 (263)
T 2a4k_A           82 HGVAHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVL-EE------GGSLVLTGSVAGL-------------  141 (263)
T ss_dssp             CEEEEGGGGTTTTC----CHHHHHHHHHHHHHHHHHHHHHHHHHC-CT------TCEEEEECCCTTC-------------
T ss_pred             cEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHH-hc------CCEEEEEecchhc-------------
Confidence            99999999753  35677889999999999999999999999999 42      5899999997654             


Q ss_pred             CCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCC
Q 025509          159 DPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRHN  212 (251)
Q Consensus       159 ~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~~  212 (251)
                         +.++...|++||+++++|+++++.|+.++|  |+||+|+||+++|++....
T Consensus       142 ---~~~~~~~Y~asK~a~~~~~~~la~e~~~~g--i~v~~v~PG~v~t~~~~~~  190 (263)
T 2a4k_A          142 ---GAFGLAHYAAGKLGVVGLARTLALELARKG--VRVNVLLPGLIQTPMTAGL  190 (263)
T ss_dssp             ---CHHHHHHHHHCSSHHHHHHHHHHHHHTTTT--CEEEEEEECSBCCGGGTTS
T ss_pred             ---CCCCcHHHHHHHHHHHHHHHHHHHHhhhhC--cEEEEEEeCcCcCchhhhc
Confidence               234567999999999999999999999999  9999999999999997653

>2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor}

Probab=100.00  E-value=1e-35  Score=247.66  Aligned_cols=176  Identities=28%  Similarity=0.363  Sum_probs=153.4

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      |++|||||++|||+++|++|+++|++|++++|+.+++             ..+.++++|++|+++++++++++.++++++
T Consensus        22 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~-------------~~~~~~~~Dl~d~~~v~~~~~~~~~~~g~i   88 (253)
T 2nm0_A           22 RSVLVTGGNRGIGLAIARAFADAGDKVAITYRSGEPP-------------EGFLAVKCDITDTEQVEQAYKEIEETHGPV   88 (253)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSCCC-------------TTSEEEECCTTSHHHHHHHHHHHHHHTCSC
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHhh-------------ccceEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence            5899999999999999999999999999999986542             237889999999999999999999999999


Q ss_pred             eEEEEcCCCCC--CCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccccCC
Q 025509           81 NILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKIN  158 (251)
Q Consensus        81 d~lv~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~  158 (251)
                      |+||||||+..  ++.+.+.++|++.+++|+.+++.++++++|.|+++     +.++||++||.++..            
T Consensus        89 D~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~-----~~g~iv~isS~~~~~------------  151 (253)
T 2nm0_A           89 EVLIANAGVTKDQLLMRMSEEDFTSVVETNLTGTFRVVKRANRAMLRA-----KKGRVVLISSVVGLL------------  151 (253)
T ss_dssp             SEEEEECSCCTTTC---CCTTTTHHHHHHHHHHHHHHHHHHHHHHHHH-----TCEEEEEECCCCCCC------------
T ss_pred             CEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-----CCCEEEEECchhhCC------------
Confidence            99999999753  35677889999999999999999999999999876     468999999987765            


Q ss_pred             CCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccC
Q 025509          159 DPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  211 (251)
Q Consensus       159 ~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  211 (251)
                         +.++...|+++|+++++|+++++.|+++.|  |+||+|+||+++|++...
T Consensus       152 ---~~~~~~~Y~asK~a~~~~~~~la~e~~~~g--i~vn~v~PG~v~T~~~~~  199 (253)
T 2nm0_A          152 ---GSAGQANYAASKAGLVGFARSLARELGSRN--ITFNVVAPGFVDTDMTKV  199 (253)
T ss_dssp             ---CHHHHHHHHHHHHHHHHHHHHHHHHHCSSS--EEEEEEEECSBCC-----
T ss_pred             ---CCCCcHHHHHHHHHHHHHHHHHHHHhhhcC--eEEEEEEeCcCcCcchhh
Confidence               556678999999999999999999999999  999999999999998764

>2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A

Probab=100.00  E-value=3e-35  Score=242.62  Aligned_cols=178  Identities=21%  Similarity=0.265  Sum_probs=158.3

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      |++|||||++|||+++|++|+++|++|++++|+.++   ..+++     +  +.++.+|+++ ++++++++++.+.++++
T Consensus         3 k~vlVTGas~giG~~~a~~l~~~G~~V~~~~r~~~~---~~~~~-----~--~~~~~~D~~~-~~~~~~~~~~~~~~g~i   71 (239)
T 2ekp_A            3 RKALVTGGSRGIGRAIAEALVARGYRVAIASRNPEE---AAQSL-----G--AVPLPTDLEK-DDPKGLVKRALEALGGL   71 (239)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHH---HHHHH-----T--CEEEECCTTT-SCHHHHHHHHHHHHTSC
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHH---HHHhh-----C--cEEEecCCch-HHHHHHHHHHHHHcCCC
Confidence            689999999999999999999999999999998765   22222     2  7789999999 99999999998888999


Q ss_pred             eEEEEcCCCCC--CCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccccCC
Q 025509           81 NILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKIN  158 (251)
Q Consensus        81 d~lv~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~  158 (251)
                      |+||||||...  ++.+.+.++|++.+++|+.+++.++++++|+|+++     +.++||++||..+..            
T Consensus        72 d~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~-----~~g~iv~isS~~~~~------------  134 (239)
T 2ekp_A           72 HVLVHAAAVNVRKPALELSYEEWRRVLYLHLDVAFLLAQAAAPHMAEA-----GWGRVLFIGSVTTFT------------  134 (239)
T ss_dssp             CEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----TCEEEEEECCGGGTS------------
T ss_pred             CEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-----CCcEEEEECchhhcc------------
Confidence            99999999753  45678899999999999999999999999999886     468999999988765            


Q ss_pred             CCCCC--CcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccC
Q 025509          159 DPSGY--NGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  211 (251)
Q Consensus       159 ~~~~~--~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  211 (251)
                         +.  ++...|++||+++++|+++++.|++++|  |+||+|+||++.|++...
T Consensus       135 ---~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g--i~v~~v~Pg~v~t~~~~~  184 (239)
T 2ekp_A          135 ---AGGPVPIPAYTTAKTALLGLTRALAKEWARLG--IRVNLLCPGYVETEFTLP  184 (239)
T ss_dssp             ---CCTTSCCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECSBCSGGGHH
T ss_pred             ---CCCCCCCccHHHHHHHHHHHHHHHHHHhhhcC--cEEEEEEeCCccCchhhc
Confidence               33  6778999999999999999999999999  999999999999998653

>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}

Probab=100.00  E-value=9.7e-35  Score=241.91  Aligned_cols=186  Identities=25%  Similarity=0.265  Sum_probs=166.2

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      |++|||||++|||+++|++|+++|++|++++|+...+++..+++.+.  +.++.++.+|++|.++++++++++.++++++
T Consensus        14 k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   91 (260)
T 3awd_A           14 RVAIVTGGAQNIGLACVTALAEAGARVIIADLDEAMATKAVEDLRME--GHDVSSVVMDVTNTESVQNAVRSVHEQEGRV   91 (260)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT--TCCEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCceEEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence            57999999999999999999999999999999988888777777654  4578999999999999999999999888999


Q ss_pred             eEEEEcCCCCC---CCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccccC
Q 025509           81 NILINNAGIMG---TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKI  157 (251)
Q Consensus        81 d~lv~~ag~~~---~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~  157 (251)
                      |+||||||...   +..+.+.++|++.+++|+.+++.+++++.|+|.++     +.++||++||..+..           
T Consensus        92 d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-----~~~~iv~~sS~~~~~-----------  155 (260)
T 3awd_A           92 DILVACAGICISEVKAEDMTDGQWLKQVDINLNGMFRSCQAVGRIMLEQ-----KQGVIVAIGSMSGLI-----------  155 (260)
T ss_dssp             CEEEECCCCCCCSCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----TCEEEEEECCGGGTS-----------
T ss_pred             CEEEECCCCCCCCCCcccCCHHHHHHHHHhccHHHHHHHHHHHHHHhhc-----CCCEEEEEecchhcc-----------
Confidence            99999999754   35567889999999999999999999999999875     468999999987765           


Q ss_pred             CCCCCCCcc--cccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCccc
Q 025509          158 NDPSGYNGF--RAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIR  210 (251)
Q Consensus       158 ~~~~~~~~~--~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~  210 (251)
                          +.+..  ..|+++|++++.|+++++.|+.+.|  |++++|+||++.|++..
T Consensus       156 ----~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~g--i~v~~v~pg~v~t~~~~  204 (260)
T 3awd_A          156 ----VNRPQQQAAYNASKAGVHQYIRSLAAEWAPHG--IRANAVAPTYIETTLTR  204 (260)
T ss_dssp             ----CCSSSCCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECCBCCTTTH
T ss_pred             ----cCCCCCccccHHHHHHHHHHHHHHHHHhhhcC--eEEEEEEeeeeccchhh
Confidence                33334  7899999999999999999999988  99999999999999876

>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A*

Probab=100.00  E-value=2.1e-35  Score=247.14  Aligned_cols=185  Identities=12%  Similarity=0.180  Sum_probs=161.8

Q ss_pred             CEEEEECCC--ChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCC
Q 025509            1 MDIVITGAT--SGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHH   78 (251)
Q Consensus         1 k~vlItG~s--~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g   78 (251)
                      |++|||||+  +|||+++|++|+++|++|++++|+. ..++..+++.+..+  ...++++|++++++++++++++.++++
T Consensus        10 k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~-~~~~~~~~l~~~~~--~~~~~~~D~~~~~~v~~~~~~~~~~~g   86 (265)
T 1qsg_A           10 KRILVTGVASKLSIAYGIAQAMHREGAELAFTYQND-KLKGRVEEFAAQLG--SDIVLQCDVAEDASIDTMFAELGKVWP   86 (265)
T ss_dssp             CEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESST-TTHHHHHHHHHHTT--CCCEEECCTTCHHHHHHHHHHHHTTCS
T ss_pred             CEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEcCcH-HHHHHHHHHHHhcC--CcEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            579999999  9999999999999999999999987 45555556655432  347899999999999999999999999


Q ss_pred             CeeEEEEcCCCCC------CCCc-CCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCC
Q 025509           79 QLNILINNAGIMG------TPFM-LSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEG  151 (251)
Q Consensus        79 ~id~lv~~ag~~~------~~~~-~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~  151 (251)
                      ++|+||||||+..      ++.+ .+.++|++.+++|+.+++.++++++|+|.+       .|+||++||.++..     
T Consensus        87 ~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~-------~g~iv~isS~~~~~-----  154 (265)
T 1qsg_A           87 KFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNP-------GSALLTLSYLGAER-----  154 (265)
T ss_dssp             SEEEEEECCCCCCGGGGSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE-------EEEEEEEECGGGTS-----
T ss_pred             CCCEEEECCCCCCccccCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHhcc-------CCEEEEEcchhhcc-----
Confidence            9999999999753      2345 788999999999999999999999999853       47999999987765     


Q ss_pred             cccccCCCCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCC
Q 025509          152 IRFDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRHN  212 (251)
Q Consensus       152 ~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~~  212 (251)
                                +.+++..|++||+++++|+++++.|+++.|  |+||+|+||+++|++....
T Consensus       155 ----------~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g--i~v~~v~PG~v~t~~~~~~  203 (265)
T 1qsg_A          155 ----------AIPNYNVMGLAKASLEANVRYMANAMGPEG--VRVNAISAGPIRTLAASGI  203 (265)
T ss_dssp             ----------BCTTTTHHHHHHHHHHHHHHHHHHHHTTTT--EEEEEEEECCCCCTTGGGS
T ss_pred             ----------CCCCchHHHHHHHHHHHHHHHHHHHhhhcC--eEEEEEEeCCCccchhhcc
Confidence                      566778999999999999999999999999  9999999999999987643

>2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A*

Probab=100.00  E-value=2e-35  Score=246.80  Aligned_cols=184  Identities=13%  Similarity=0.149  Sum_probs=161.8

Q ss_pred             CEEEEECCC--ChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCC
Q 025509            1 MDIVITGAT--SGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHH   78 (251)
Q Consensus         1 k~vlItG~s--~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g   78 (251)
                      |++|||||+  +|||+++|++|+++|++|++++|+.+ .++..+++.+..+  .+.++++|++++++++++++++.+++|
T Consensus         9 k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~-~~~~~~~l~~~~~--~~~~~~~D~~~~~~v~~~~~~~~~~~g   85 (261)
T 2wyu_A            9 KKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAER-LRPEAEKLAEALG--GALLFRADVTQDEELDALFAGVKEAFG   85 (261)
T ss_dssp             CEEEEESCCSSSSHHHHHHHHHHHHTCEEEEEESCGG-GHHHHHHHHHHTT--CCEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCCHH-HHHHHHHHHHhcC--CcEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            579999999  99999999999999999999999875 4445555555432  378899999999999999999999999


Q ss_pred             CeeEEEEcCCCCC------CCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCc
Q 025509           79 QLNILINNAGIMG------TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGI  152 (251)
Q Consensus        79 ~id~lv~~ag~~~------~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~  152 (251)
                      ++|+||||||+..      ++.+.+.++|++.+++|+.+++.++++++|+|++       .|+||++||.++..      
T Consensus        86 ~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~-------~g~iv~isS~~~~~------  152 (261)
T 2wyu_A           86 GLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVAVARRAEPLLRE-------GGGIVTLTYYASEK------  152 (261)
T ss_dssp             SEEEEEECCCCCCHHHHSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEE-------EEEEEEEECGGGTS------
T ss_pred             CCCEEEECCCCCCcccCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHhcc-------CCEEEEEecccccC------
Confidence            9999999999753      3557788999999999999999999999998853       47999999987765      


Q ss_pred             ccccCCCCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccC
Q 025509          153 RFDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  211 (251)
Q Consensus       153 ~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  211 (251)
                               +.+++..|++||+++++|+++++.|++++|  |+||+|+||+++|++...
T Consensus       153 ---------~~~~~~~Y~asK~a~~~~~~~la~e~~~~g--i~v~~v~Pg~v~t~~~~~  200 (261)
T 2wyu_A          153 ---------VVPKYNVMAIAKAALEASVRYLAYELGPKG--VRVNAISAGPVRTVAARS  200 (261)
T ss_dssp             ---------BCTTCHHHHHHHHHHHHHHHHHHHHHGGGT--CEEEEEEECCCCCTGGGG
T ss_pred             ---------CCCCchHHHHHHHHHHHHHHHHHHHHhhhC--cEEEEEeeCCCcCchhhh
Confidence                     566778999999999999999999999999  999999999999998764

>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli}

Probab=100.00  E-value=3.5e-35  Score=243.86  Aligned_cols=177  Identities=27%  Similarity=0.353  Sum_probs=154.0

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      |++|||||++|||+++|++|+++|++|++++|+.+.         +.   ..+.++.+|++|.++++++++++.++++++
T Consensus         8 k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~---------~~---~~~~~~~~D~~d~~~~~~~~~~~~~~~g~i   75 (250)
T 2fwm_X            8 KNVWVTGAGKGIGYATALAFVEAGAKVTGFDQAFTQ---------EQ---YPFATEVMDVADAAQVAQVCQRLLAETERL   75 (250)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCCCS---------SC---CSSEEEECCTTCHHHHHHHHHHHHHHCSCC
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCchhh---------hc---CCceEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence            589999999999999999999999999999998642         11   127889999999999999999999999999


Q ss_pred             eEEEEcCCCCC--CCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccccCC
Q 025509           81 NILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKIN  158 (251)
Q Consensus        81 d~lv~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~  158 (251)
                      |+||||||...  ++.+.+.++|++.+++|+.+++.++++++|+|+++     +.++||++||..+..            
T Consensus        76 d~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~-----~~g~iv~isS~~~~~------------  138 (250)
T 2fwm_X           76 DALVNAAGILRMGATDQLSKEDWQQTFAVNVGGAFNLFQQTMNQFRRQ-----RGGAIVTVASDAAHT------------  138 (250)
T ss_dssp             CEEEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----TCCEEEEECCGGGTS------------
T ss_pred             CEEEECCCcCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhc-----CCCEEEEECchhhCC------------
Confidence            99999999753  35677899999999999999999999999999876     468999999988765            


Q ss_pred             CCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccC
Q 025509          159 DPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  211 (251)
Q Consensus       159 ~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  211 (251)
                         +.++...|+++|+++++|+++++.|+++.|  |+||+|+||+++|++...
T Consensus       139 ---~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g--i~v~~v~Pg~v~t~~~~~  186 (250)
T 2fwm_X          139 ---PRIGMSAYGASKAALKSLALSVGLELAGSG--VRCNVVSPGSTDTDMQRT  186 (250)
T ss_dssp             ---CCTTCHHHHHHHHHHHHHHHHHHHHHGGGT--CEEEEEEECCC-------
T ss_pred             ---CCCCCchHHHHHHHHHHHHHHHHHHhCccC--CEEEEEECCcccCccccc
Confidence               667788999999999999999999999999  999999999999998654

>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*

Probab=100.00  E-value=1.8e-35  Score=249.90  Aligned_cols=185  Identities=23%  Similarity=0.316  Sum_probs=162.0

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchh-HHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCC
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAA-GKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQ   79 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~-~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~   79 (251)
                      |++|||||++|||+++|++|+++|++|++++|+... .++..+++.+.  +.++.++.+|+++.++++++++++.+.+++
T Consensus        30 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~  107 (283)
T 1g0o_A           30 KVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKN--GSDAACVKANVGVVEDIVRMFEEAVKIFGK  107 (283)
T ss_dssp             CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT--TCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHHh--CCCeEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            689999999999999999999999999999998654 45555555443  457899999999999999999999999999


Q ss_pred             eeEEEEcCCCCC--CCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccccC
Q 025509           80 LNILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKI  157 (251)
Q Consensus        80 id~lv~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~  157 (251)
                      +|+||||||+..  ++.+.+.++|++.+++|+.+++.++++++|+|.       ..|+||++||..+..           
T Consensus       108 iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~-------~~g~iv~isS~~~~~-----------  169 (283)
T 1g0o_A          108 LDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLE-------IGGRLILMGSITGQA-----------  169 (283)
T ss_dssp             CCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSC-------TTCEEEEECCGGGTC-----------
T ss_pred             CCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHh-------cCCeEEEEechhhcc-----------
Confidence            999999999753  356778999999999999999999999999982       358999999987765           


Q ss_pred             CCCCCCC-cccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccC
Q 025509          158 NDPSGYN-GFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  211 (251)
Q Consensus       158 ~~~~~~~-~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  211 (251)
                          +.+ ....|++||+++++|+++++.|+++.|  |+||+|+||+++|++...
T Consensus       170 ----~~~~~~~~Y~asK~a~~~~~~~la~e~~~~g--i~v~~v~PG~v~t~~~~~  218 (283)
T 1g0o_A          170 ----KAVPKHAVYSGSKGAIETFARCMAIDMADKK--ITVNVVAPGGIKTDMYHA  218 (283)
T ss_dssp             ----SSCSSCHHHHHHHHHHHHHHHHHHHHHGGGT--CEEEEEEECCBSSHHHHH
T ss_pred             ----CCCCCCcchHHHHHHHHHHHHHHHHHhcccC--eEEEEEecCcccchhhhh
Confidence                333 377999999999999999999999999  999999999999998653

>1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G

Probab=100.00  E-value=3.3e-35  Score=242.53  Aligned_cols=188  Identities=28%  Similarity=0.333  Sum_probs=168.2

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEE-ecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCC
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMG-VRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQ   79 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~-~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~   79 (251)
                      |++|||||++|||+++|++|+++|++|+++ +|+.+..++..+++.+.  +.++.++.+|++++++++++++++.+++++
T Consensus         2 k~vlVTGasggiG~~la~~l~~~G~~v~~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   79 (244)
T 1edo_A            2 PVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAY--GGQAITFGGDVSKEADVEAMMKTAIDAWGT   79 (244)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHH--TCEEEEEECCTTSHHHHHHHHHHHHHHSSC
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhc--CCcEEEEeCCCCCHHHHHHHHHHHHHHcCC
Confidence            689999999999999999999999999984 78888887777777654  457899999999999999999999999999


Q ss_pred             eeEEEEcCCCCCC--CCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccccC
Q 025509           80 LNILINNAGIMGT--PFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKI  157 (251)
Q Consensus        80 id~lv~~ag~~~~--~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~  157 (251)
                      +|+||||||....  ..+.+.++|++.+++|+.+++.++++++|+|.++     +.++||++||..+..           
T Consensus        80 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-----~~~~iv~~sS~~~~~-----------  143 (244)
T 1edo_A           80 IDVVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKK-----RKGRIINIASVVGLI-----------  143 (244)
T ss_dssp             CSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----TCEEEEEECCTHHHH-----------
T ss_pred             CCEEEECCCCCCCcCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhc-----CCCEEEEECChhhcC-----------
Confidence            9999999997643  4567889999999999999999999999999876     468999999988766           


Q ss_pred             CCCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCC
Q 025509          158 NDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRHN  212 (251)
Q Consensus       158 ~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~~  212 (251)
                          +.++...|+++|+++++|+++++.|+.+.|  |++++|+||++.|++....
T Consensus       144 ----~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g--i~v~~v~Pg~v~t~~~~~~  192 (244)
T 1edo_A          144 ----GNIGQANYAAAKAGVIGFSKTAAREGASRN--INVNVVCPGFIASDMTAKL  192 (244)
T ss_dssp             ----CCTTCHHHHHHHHHHHHHHHHHHHHHHTTT--EEEEEEEECSBCSHHHHTT
T ss_pred             ----CCCCCccchhhHHHHHHHHHHHHHHhhhcC--CEEEEEeeCccccchhhhc
Confidence                566778999999999999999999999888  9999999999999987653

>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*

Probab=100.00  E-value=1.4e-34  Score=240.16  Aligned_cols=187  Identities=28%  Similarity=0.379  Sum_probs=167.4

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      |++|||||++|||++++++|+++|++|++++|+.+.+++..+++.+.  +.++.++.+|++++++++++++++.++++++
T Consensus        12 ~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   89 (255)
T 1fmc_A           12 KCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQL--GGQAFACRCDITSEQELSALADFAISKLGKV   89 (255)
T ss_dssp             CEEEETTTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHT--TCCEEEEECCTTCHHHHHHHHHHHHHHHSSC
T ss_pred             CEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHh--CCceEEEEcCCCCHHHHHHHHHHHHHhcCCC
Confidence            57999999999999999999999999999999988888777777654  4578899999999999999999998888999


Q ss_pred             eEEEEcCCCCCC-CCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccccCCC
Q 025509           81 NILINNAGIMGT-PFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKIND  159 (251)
Q Consensus        81 d~lv~~ag~~~~-~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~  159 (251)
                      |+||||||.... ..+.+.++|++.+++|+.+++.++++++|+|+++     +.++||++||..+..             
T Consensus        90 d~vi~~Ag~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~-----~~~~iv~~sS~~~~~-------------  151 (255)
T 1fmc_A           90 DILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKN-----GGGVILTITSMAAEN-------------  151 (255)
T ss_dssp             CEEEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----TCEEEEEECCGGGTC-------------
T ss_pred             CEEEECCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-----CCcEEEEEcchhhcC-------------
Confidence            999999997543 3367889999999999999999999999999876     468999999987765             


Q ss_pred             CCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccC
Q 025509          160 PSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  211 (251)
Q Consensus       160 ~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  211 (251)
                        +.++...|+++|++++.|+++++.|+.+.|  |++++|+||++.|++...
T Consensus       152 --~~~~~~~Y~~sK~a~~~~~~~~~~~~~~~~--i~v~~v~Pg~v~t~~~~~  199 (255)
T 1fmc_A          152 --KNINMTSYASSKAAASHLVRNMAFDLGEKN--IRVNGIAPGAILTDALKS  199 (255)
T ss_dssp             --CCTTCHHHHHHHHHHHHHHHHHHHHHHTTT--EEEEEEEECSBCSHHHHT
T ss_pred             --CCCCCcccHHHHHHHHHHHHHHHHHhhhcC--cEEEEEecccCcchhhhh
Confidence              566778999999999999999999999888  999999999999998764

>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A

Probab=100.00  E-value=5.1e-35  Score=244.58  Aligned_cols=187  Identities=26%  Similarity=0.275  Sum_probs=154.7

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcC-CC
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQH-HQ   79 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~-g~   79 (251)
                      |++|||||++|||++++++|+++|++|++++|+.+++++..+++.+.  +..+.++.+|+++.++++++++++.+.+ ++
T Consensus        15 k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   92 (266)
T 1xq1_A           15 KTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKK--GFQVTGSVCDASLRPEREKLMQTVSSMFGGK   92 (266)
T ss_dssp             CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT--TCCEEEEECCTTSHHHHHHHHHHHHHHHTTC
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCeeEEEECCCCCHHHHHHHHHHHHHHhCCC
Confidence            57999999999999999999999999999999988888877777654  4578999999999999999999998888 89


Q ss_pred             eeEEEEcCCCCC--CCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccccC
Q 025509           80 LNILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKI  157 (251)
Q Consensus        80 id~lv~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~  157 (251)
                      +|+||||||...  +..+.+.++|++.+++|+.+++.++++++|+|+++     +.++||++||..+..           
T Consensus        93 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~-----~~~~iv~isS~~~~~-----------  156 (266)
T 1xq1_A           93 LDILINNLGAIRSKPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKAS-----GCGNIIFMSSIAGVV-----------  156 (266)
T ss_dssp             CSEEEEECCC------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----SSCEEEEEC-----------------
T ss_pred             CcEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-----CCcEEEEEccchhcc-----------
Confidence            999999999753  35667889999999999999999999999999876     468999999987765           


Q ss_pred             CCCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccC
Q 025509          158 NDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  211 (251)
Q Consensus       158 ~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  211 (251)
                          +.+....|+++|++++.|+++++.|+.+.|  |++++|+||++.|++...
T Consensus       157 ----~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g--i~v~~v~Pg~v~t~~~~~  204 (266)
T 1xq1_A          157 ----SASVGSIYSATKGALNQLARNLACEWASDG--IRANAVAPAVIATPLAEA  204 (266)
T ss_dssp             --------CCHHHHHHHHHHHHHHHHHHHHGGGT--CEEEEEECCSCC------
T ss_pred             ----CCCCCchHHHHHHHHHHHHHHHHHHHhHhC--cEEEEEeeCCCccchhhh
Confidence                556778999999999999999999999888  999999999999998764

>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A*

Probab=100.00  E-value=5.8e-35  Score=243.50  Aligned_cols=188  Identities=28%  Similarity=0.343  Sum_probs=167.2

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEec-CchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCC
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVR-DIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQ   79 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r-~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~   79 (251)
                      |++|||||++|||++++++|+++|++|++++| +.+.+++..+++.+.  +..+.++.+|+++++++.++++++.+.+++
T Consensus         8 k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   85 (261)
T 1gee_A            8 KVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKV--GGEAIAVKGDVTVESDVINLVQSAIKEFGK   85 (261)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT--TCEEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred             CEEEEeCCCChHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHhc--CCceEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            58999999999999999999999999999999 777777777776553  457889999999999999999999988999


Q ss_pred             eeEEEEcCCCCC--CCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccccC
Q 025509           80 LNILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKI  157 (251)
Q Consensus        80 id~lv~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~  157 (251)
                      +|+||||||...  +..+.+.++|++.+++|+.+++.++++++|.|.++.    ..++||++||..+..           
T Consensus        86 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~----~~~~iv~isS~~~~~-----------  150 (261)
T 1gee_A           86 LDVMINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVEND----IKGTVINMSSVHEKI-----------  150 (261)
T ss_dssp             CCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT----CCCEEEEECCGGGTS-----------
T ss_pred             CCEEEECCCCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCC----CCCEEEEeCCHHhcC-----------
Confidence            999999999754  345678899999999999999999999999998751    158999999987765           


Q ss_pred             CCCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccC
Q 025509          158 NDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  211 (251)
Q Consensus       158 ~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  211 (251)
                          +.++...|+++|++++.|+++++.|+.+.|  |++++|+||++.|++...
T Consensus       151 ----~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g--i~v~~v~Pg~v~t~~~~~  198 (261)
T 1gee_A          151 ----PWPLFVHYAASKGGMKLMTETLALEYAPKG--IRVNNIGPGAINTPINAE  198 (261)
T ss_dssp             ----CCTTCHHHHHHHHHHHHHHHHHHHHHGGGT--CEEEEEEECSBCSGGGHH
T ss_pred             ----CCCCccHHHHHHHHHHHHHHHHHHHhcccC--eEEEEEeeCCcCCchhhh
Confidence                667788999999999999999999999888  999999999999998653

>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2

Probab=100.00  E-value=1.8e-34  Score=243.97  Aligned_cols=187  Identities=29%  Similarity=0.352  Sum_probs=165.1

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      |++|||||++|||+++|++|+++|++|++++|+++++++..+++.+.  +.++.++.+|++|.++++++++++.+.++++
T Consensus        45 k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dl~d~~~v~~~~~~~~~~~~~i  122 (285)
T 2c07_A           45 KVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSF--GYESSGYAGDVSKKEEISEVINKILTEHKNV  122 (285)
T ss_dssp             CEEEEESTTSHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHTT--TCCEEEEECCTTCHHHHHHHHHHHHHHCSCC
T ss_pred             CEEEEECCCcHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHhc--CCceeEEECCCCCHHHHHHHHHHHHHhcCCC
Confidence            57999999999999999999999999999999988888877777553  4578999999999999999999999999999


Q ss_pred             eEEEEcCCCCC--CCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccccCC
Q 025509           81 NILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKIN  158 (251)
Q Consensus        81 d~lv~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~  158 (251)
                      |+||||||...  ++.+.+.++|++.+++|+.+++.++++++|.|.++     +.++||++||.++..            
T Consensus       123 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-----~~~~iv~isS~~~~~------------  185 (285)
T 2c07_A          123 DILVNNAGITRDNLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMINN-----RYGRIINISSIVGLT------------  185 (285)
T ss_dssp             CEEEECCCCCCCCCTTTCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHH-----TCEEEEEECCTHHHH------------
T ss_pred             CEEEECCCCCCCCchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhC-----CCCEEEEECChhhcc------------
Confidence            99999999763  35677889999999999999999999999999875     468999999988776            


Q ss_pred             CCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccC
Q 025509          159 DPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  211 (251)
Q Consensus       159 ~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  211 (251)
                         +.++...|+++|++++.|+++++.|+.+.|  |+|++|+||++.|++...
T Consensus       186 ---~~~~~~~Y~asK~a~~~~~~~la~e~~~~g--i~v~~v~Pg~v~t~~~~~  233 (285)
T 2c07_A          186 ---GNVGQANYSSSKAGVIGFTKSLAKELASRN--ITVNAIAPGFISSDMTDK  233 (285)
T ss_dssp             ---CCTTCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECSBCC-----
T ss_pred             ---CCCCCchHHHHHHHHHHHHHHHHHHHHHhC--cEEEEEEeCcEecCchhh
Confidence               566778999999999999999999999988  999999999999998764

>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2

Probab=100.00  E-value=8.1e-35  Score=243.77  Aligned_cols=186  Identities=27%  Similarity=0.348  Sum_probs=162.5

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      |++|||||++|||+++|++|+++|++|++++|+.+++++..+++.+...+..+.++.+|++|+++++++++++.+++|++
T Consensus         8 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~i   87 (267)
T 2gdz_A            8 KVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRKVVDHFGRL   87 (267)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHHHHHHHHSCC
T ss_pred             CEEEEECCCCcHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhcCCCceEEEecCCCCHHHHHHHHHHHHHHcCCC
Confidence            58999999999999999999999999999999988877777766554334568999999999999999999999999999


Q ss_pred             eEEEEcCCCCCCCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccccCCCC
Q 025509           81 NILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDP  160 (251)
Q Consensus        81 d~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~  160 (251)
                      |+||||||..      +.++|++.+++|+.+++.+++.++|+|+++..  ...++||++||.++..              
T Consensus        88 d~lv~~Ag~~------~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~--~~~g~iv~isS~~~~~--------------  145 (267)
T 2gdz_A           88 DILVNNAGVN------NEKNWEKTLQINLVSVISGTYLGLDYMSKQNG--GEGGIIINMSSLAGLM--------------  145 (267)
T ss_dssp             CEEEECCCCC------CSSSHHHHHHHHTHHHHHHHHHHHHHHCGGGT--CCCEEEEEECCGGGTS--------------
T ss_pred             CEEEECCCCC------ChhhHHHHHhHHHHHHHHHHHHHHHHHHhccC--CCCCEEEEeCCccccC--------------
Confidence            9999999963      25679999999999999999999999976421  1258999999988765              


Q ss_pred             CCCCcccccchhHHHHHHHHHHH--HHHhccCCCcEEEEEeeCCcccCCcccC
Q 025509          161 SGYNGFRAYSQSKLANILHANEL--ARRLKEDGVDITANSVHPGAIATNIIRH  211 (251)
Q Consensus       161 ~~~~~~~~Y~~sK~a~~~~~~~l--a~e~~~~g~~i~v~~v~Pg~v~t~~~~~  211 (251)
                       +.++...|++||+++++|++++  +.|+.+.|  |+||+|+||+++|++...
T Consensus       146 -~~~~~~~Y~~sK~a~~~~~~~~ala~e~~~~g--i~v~~v~Pg~v~t~~~~~  195 (267)
T 2gdz_A          146 -PVAQQPVYCASKHGIVGFTRSAALAANLMNSG--VRLNAICPGFVNTAILES  195 (267)
T ss_dssp             -CCTTCHHHHHHHHHHHHHHHHHHHHHHHHTCC--EEEEEEEESCBSSHHHHG
T ss_pred             -CCCCCchHHHHHHHHHHHHHHHHHHHHhccCC--cEEEEEecCcCcchhhhc
Confidence             5667789999999999999995  68999888  999999999999998653

>1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A

Probab=100.00  E-value=2.7e-35  Score=244.20  Aligned_cols=176  Identities=27%  Similarity=0.375  Sum_probs=152.7

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      |++|||||++|||+++|++|+++|++|++++|++++++             .+..+.+|++++++++++++++.++++++
T Consensus        16 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~-------------~~~~~~~D~~~~~~~~~~~~~~~~~~g~i   82 (247)
T 1uzm_A           16 RSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAPK-------------GLFGVEVDVTDSDAVDRAFTAVEEHQGPV   82 (247)
T ss_dssp             CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSSCCCT-------------TSEEEECCTTCHHHHHHHHHHHHHHHSSC
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHH-------------HhcCeeccCCCHHHHHHHHHHHHHHcCCC
Confidence            57999999999999999999999999999999875422             12248899999999999999999999999


Q ss_pred             eEEEEcCCCCC--CCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccccCC
Q 025509           81 NILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKIN  158 (251)
Q Consensus        81 d~lv~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~  158 (251)
                      |+||||||+..  ++.+.+.++|++.+++|+.+++.++++++|+|+++     +.++||++||..+..            
T Consensus        83 d~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-----~~g~iv~isS~~~~~------------  145 (247)
T 1uzm_A           83 EVLVSNAGLSADAFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRN-----KFGRMIFIGSVSGLW------------  145 (247)
T ss_dssp             SEEEEECSCCC-----CCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT-----TCEEEEEECCCCC--------------
T ss_pred             CEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhC-----CCCEEEEECCHhhcc------------
Confidence            99999999764  35678899999999999999999999999999875     468999999988765            


Q ss_pred             CCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccC
Q 025509          159 DPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  211 (251)
Q Consensus       159 ~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  211 (251)
                         +.++...|++||+|+++|+++++.|+.+.|  |+||+|+||+++|++...
T Consensus       146 ---~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g--i~v~~v~PG~v~t~~~~~  193 (247)
T 1uzm_A          146 ---GIGNQANYAASKAGVIGMARSIARELSKAN--VTANVVAPGYIDTDMTRA  193 (247)
T ss_dssp             ------CCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECSBCCHHHHH
T ss_pred             ---CCCCChhHHHHHHHHHHHHHHHHHHhhhcC--cEEEEEEeCCCcccchhh
Confidence               566778999999999999999999999999  999999999999998654

>1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP}

Probab=100.00  E-value=2.9e-35  Score=243.48  Aligned_cols=176  Identities=16%  Similarity=0.151  Sum_probs=154.8

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEE-e--cCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcC
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMG-V--RDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQH   77 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~-~--r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~   77 (251)
                      |++|||||++|||+++|++|+++|++|+++ +  |+.+++++..+++    .+       .|+.|.++++++++++.+++
T Consensus         2 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~~r~~~~~~~~~~~~----~~-------~~~~~~~~v~~~~~~~~~~~   70 (244)
T 1zmo_A            2 VIALVTHARHFAGPAAVEALTQDGYTVVCHDASFADAAERQRFESEN----PG-------TIALAEQKPERLVDATLQHG   70 (244)
T ss_dssp             CEEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHHHHHHS----TT-------EEECCCCCGGGHHHHHGGGS
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEecCCcCCHHHHHHHHHHh----CC-------CcccCHHHHHHHHHHHHHHc
Confidence            689999999999999999999999999999 6  9887776665543    12       12337778888999999999


Q ss_pred             CCeeEEEEcCCCC-----CCCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCc
Q 025509           78 HQLNILINNAGIM-----GTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGI  152 (251)
Q Consensus        78 g~id~lv~~ag~~-----~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~  152 (251)
                      +++|+||||||+.     .++.+.+.++|++.+++|+.+++.++++++|+|+++     +.|+||++||..+..      
T Consensus        71 g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~-----~~g~iv~isS~~~~~------  139 (244)
T 1zmo_A           71 EAIDTIVSNDYIPRPMNRLPLEGTSEADIRQMFEALSIFPILLLQSAIAPLRAA-----GGASVIFITSSVGKK------  139 (244)
T ss_dssp             SCEEEEEECCCCCTTGGGCCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT-----TCEEEEEECCGGGTS------
T ss_pred             CCCCEEEECCCcCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-----CCcEEEEECChhhCC------
Confidence            9999999999975     345677889999999999999999999999999875     468999999988776      


Q ss_pred             ccccCCCCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcc
Q 025509          153 RFDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNII  209 (251)
Q Consensus       153 ~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~  209 (251)
                               +.++...|++||+|+++|+++++.|++++|  |+||+|+||+++|++.
T Consensus       140 ---------~~~~~~~Y~asK~a~~~~~~~la~e~~~~g--i~v~~v~PG~v~T~~~  185 (244)
T 1zmo_A          140 ---------PLAYNPLYGPARAATVALVESAAKTLSRDG--ILLYAIGPNFFNNPTY  185 (244)
T ss_dssp             ---------CCTTCTTHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEESSBCBTTT
T ss_pred             ---------CCCCchHHHHHHHHHHHHHHHHHHHHhhcC--cEEEEEeeCCCcCCcc
Confidence                     667788999999999999999999999999  9999999999999997

>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus}

Probab=100.00  E-value=7.7e-35  Score=239.11  Aligned_cols=183  Identities=26%  Similarity=0.326  Sum_probs=155.5

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      |++|||||++|||++++++|+++|++|++++|+.+++++..+++      .++.++.+|+++.++++++++++.+.++++
T Consensus         6 k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~------~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   79 (234)
T 2ehd_A            6 GAVLITGASRGIGEATARLLHAKGYRVGLMARDEKRLQALAAEL------EGALPLPGDVREEGDWARAVAAMEEAFGEL   79 (234)
T ss_dssp             CEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHS------TTCEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh------hhceEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence            57999999999999999999999999999999987766654433      268889999999999999999998888999


Q ss_pred             eEEEEcCCCCC--CCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccccCC
Q 025509           81 NILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKIN  158 (251)
Q Consensus        81 d~lv~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~  158 (251)
                      |+||||||...  ++.+.+.++|++.+++|+.+++.+++.++|.|+++     +.++||++||..+..            
T Consensus        80 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~-----~~~~iv~isS~~~~~------------  142 (234)
T 2ehd_A           80 SALVNNAGVGVMKPVHELTLEEWRLVLDTNLTGAFLGIRHAVPALLRR-----GGGTIVNVGSLAGKN------------  142 (234)
T ss_dssp             CEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTT-----TCEEEEEECCTTTTS------------
T ss_pred             CEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhC-----CCcEEEEECCchhcC------------
Confidence            99999999753  35567889999999999999999999999999875     468999999987665            


Q ss_pred             CCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccC
Q 025509          159 DPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  211 (251)
Q Consensus       159 ~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  211 (251)
                         +.++...|+++|++++.|+++++.|+.+.|  |++++|+||+++|++...
T Consensus       143 ---~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g--i~v~~v~Pg~v~t~~~~~  190 (234)
T 2ehd_A          143 ---PFKGGAAYNASKFGLLGLAGAAMLDLREAN--VRVVNVLPGSVDTGFAGN  190 (234)
T ss_dssp             ---CCTTCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEECC---------
T ss_pred             ---CCCCCchhhHHHHHHHHHHHHHHHHHhhcC--cEEEEEEeCCCcCCcccc
Confidence               566778999999999999999999999989  999999999999998654

>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2

Probab=100.00  E-value=5.5e-35  Score=245.54  Aligned_cols=186  Identities=27%  Similarity=0.338  Sum_probs=166.1

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      |++|||||++|||+++|++|+++|++|++++|+.+.+++..+++.+.  +.++.++.+|+++.++++++++++.+.++++
T Consensus        32 k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~i  109 (272)
T 1yb1_A           32 EIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGL--GAKVHTFVVDCSNREDIYSSAKKVKAEIGDV  109 (272)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT--TCCEEEEECCTTCHHHHHHHHHHHHHHTCCC
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCCEEEEEEcCHHHHHHHHHHHHhc--CCeEEEEEeeCCCHHHHHHHHHHHHHHCCCC
Confidence            68999999999999999999999999999999988888887777654  4579999999999999999999999999999


Q ss_pred             eEEEEcCCCCC--CCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccccCC
Q 025509           81 NILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKIN  158 (251)
Q Consensus        81 d~lv~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~  158 (251)
                      |+||||||...  +..+.+.++|++.+++|+.+++.++++++|.|+++     +.++||++||..+..            
T Consensus       110 D~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-----~~~~iv~isS~~~~~------------  172 (272)
T 1yb1_A          110 SILVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKN-----NHGHIVTVASAAGHV------------  172 (272)
T ss_dssp             SEEEECCCCCCCCCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHHT-----TCEEEEEECCCC-CC------------
T ss_pred             cEEEECCCcCCCcchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-----CCCEEEEEechhhcC------------
Confidence            99999999754  34566788999999999999999999999999875     468999999987765            


Q ss_pred             CCCCCCcccccchhHHHHHHHHHHHHHHhc---cCCCcEEEEEeeCCcccCCccc
Q 025509          159 DPSGYNGFRAYSQSKLANILHANELARRLK---EDGVDITANSVHPGAIATNIIR  210 (251)
Q Consensus       159 ~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~---~~g~~i~v~~v~Pg~v~t~~~~  210 (251)
                         +.++...|+++|++++.|+++++.|+.   +.|  |+|++|+||+++|++..
T Consensus       173 ---~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~~~g--i~v~~v~Pg~v~t~~~~  222 (272)
T 1yb1_A          173 ---SVPFLLAYCSSKFAAVGFHKTLTDELAALQITG--VKTTCLCPNFVNTGFIK  222 (272)
T ss_dssp             ---CHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCTT--EEEEEEEETHHHHCSTT
T ss_pred             ---CCCCchhHHHHHHHHHHHHHHHHHHHHHhCCCC--eEEEEEeCCcccCCccc
Confidence               556778999999999999999999997   557  99999999999999865

>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A*

Probab=100.00  E-value=1.1e-34  Score=242.27  Aligned_cols=189  Identities=24%  Similarity=0.304  Sum_probs=163.1

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      |++|||||++|||+++|++|+++|++|++++|+..++++..+++     +..+.++.+|++++++++++++++.++++++
T Consensus        13 k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~i   87 (265)
T 2o23_A           13 LVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKL-----GNNCVFAPADVTSEKDVQTALALAKGKFGRV   87 (265)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSSHHHHHHHH-----CTTEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCcHhHHHHHHHh-----CCceEEEEcCCCCHHHHHHHHHHHHHHCCCC
Confidence            58999999999999999999999999999999988877776655     4578999999999999999999999999999


Q ss_pred             eEEEEcCCCCCC--CC------cCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhcc-CCCCceEEEEcCccccccccCC
Q 025509           81 NILINNAGIMGT--PF------MLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARK-SGGEGRIINVSSEGHRLAYHEG  151 (251)
Q Consensus        81 d~lv~~ag~~~~--~~------~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~-~~~~g~iv~vsS~~~~~~~~~~  151 (251)
                      |+||||||....  +.      +.+.++|++.+++|+.+++.++++++|+|+++... ..+.++||++||..+..     
T Consensus        88 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~-----  162 (265)
T 2o23_A           88 DVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFE-----  162 (265)
T ss_dssp             CEEEECCCCCCCCCSEETTTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHHHH-----
T ss_pred             CEEEECCccCCCCccccccccCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcccccCCCCcEEEEeCChhhcC-----
Confidence            999999997533  22      36788999999999999999999999999764110 01358999999988776     


Q ss_pred             cccccCCCCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccC
Q 025509          152 IRFDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  211 (251)
Q Consensus       152 ~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  211 (251)
                                +.++...|+++|+++++|+++++.|+.+.|  |+||+|+||++.|++...
T Consensus       163 ----------~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g--i~v~~v~Pg~v~t~~~~~  210 (265)
T 2o23_A          163 ----------GQVGQAAYSASKGGIVGMTLPIARDLAPIG--IRVMTIAPGLFGTPLLTS  210 (265)
T ss_dssp             ----------CCTTCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECCBCCC----
T ss_pred             ----------CCCCCchhHHHHHHHHHHHHHHHHHHhhcC--cEEEEEEeccccCccccc
Confidence                      566788999999999999999999999988  999999999999998764

>3zu3_A Putative reductase YPO4104/Y4119/YP_4011; oxidoreductase, fatty acid biosynthesis II, short-chain dehydrogenase reductase superfamily; HET: NAI; 1.80A {Yersinia pestis} PDB: 3zu4_A* 3zu5_A* 3zu2_A*

Probab=100.00  E-value=6.2e-35  Score=253.68  Aligned_cols=189  Identities=11%  Similarity=0.070  Sum_probs=159.7

Q ss_pred             CEEEEECCCChhHHHHHHHHHH-cCCEEEEEecCchhHH------------HHHHHHHhhCCCCceEEEEecCCCHHHHH
Q 025509            1 MDIVITGATSGIGTETARVLAL-RGVHVVMGVRDIAAGK------------DVKETIVKEIPSAKVDAMELDLSSLASVR   67 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~-~G~~Vi~~~r~~~~~~------------~~~~~~~~~~~~~~v~~~~~D~~~~~~i~   67 (251)
                      |++||||||+|||+++|+.|++ .|++|++++|+.+..+            ...+.+.+.  +..+..+.+|+++.++++
T Consensus        48 KvaLVTGas~GIG~AiA~~LA~g~GA~Vv~~~~~~~~~~~~~~~~gwyn~~~~~~~~~~~--G~~a~~i~~Dvtd~~~v~  125 (405)
T 3zu3_A           48 KRVLVIGASTGYGLAARITAAFGCGADTLGVFFERPGEEGKPGTSGWYNSAAFHKFAAQK--GLYAKSINGDAFSDEIKQ  125 (405)
T ss_dssp             SEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCBTTBCCCHHHHHHHHHHHHHHHT--TCCEEEEESCTTSHHHHH
T ss_pred             CEEEEeCcchHHHHHHHHHHHHhcCCEEEEEeCCchhhhhhcccccchhHHHHHHHHHhc--CCceEEEECCCCCHHHHH
Confidence            6899999999999999999999 9999999998755432            122233333  567889999999999999


Q ss_pred             HHHHHHHhcCCCeeEEEEcCCCC---------------CCC---------------------CcCCchhhHHHHHHHHHH
Q 025509           68 NFASEYNIQHHQLNILINNAGIM---------------GTP---------------------FMLSKDNIELQFATNHLG  111 (251)
Q Consensus        68 ~~~~~~~~~~g~id~lv~~ag~~---------------~~~---------------------~~~~~~~~~~~~~~n~~~  111 (251)
                      ++++++.+++|++|+||||||..               .++                     .+.++++|++.+++|..+
T Consensus       126 ~~v~~i~~~~G~IDiLVNNAG~~~r~~p~tG~~~~s~~~pig~~~~~~~~d~~~~~~~~~~i~~~t~ee~~~~v~Vn~~~  205 (405)
T 3zu3_A          126 LTIDAIKQDLGQVDQVIYSLASPRRTHPKTGEVFNSALKPIGNAVNLRGLDTDKEVIKESVLQPATQSEIDSTVAVMGGE  205 (405)
T ss_dssp             HHHHHHHHHTSCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEEETTTTEEEEEEECCCCHHHHHHHHHHHSSH
T ss_pred             HHHHHHHHHcCCCCEEEEcCccccccCccccccccccccccccccccccccccccccccccCCCCCHHHHHHHHHhhchh
Confidence            99999999999999999999974               223                     457889999999999999


Q ss_pred             HH-HHHHHHHHH-HHHhhccCCCCceEEEEcCccccccccCCcccccCCCCCCCCcc--cccchhHHHHHHHHHHHHHHh
Q 025509          112 HF-LLTNLLLDT-MKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGF--RAYSQSKLANILHANELARRL  187 (251)
Q Consensus       112 ~~-~l~~~~~~~-~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~--~~Y~~sK~a~~~~~~~la~e~  187 (251)
                      .+ .+++++.+. |+.      ++|+||++||.++..               +.+.+  .+|++||+|+.+|+++||.|+
T Consensus       206 ~~~~~~~~~~~~~m~~------~gG~IVniSSi~~~~---------------~~p~~~~~aY~AaKaal~~ltrsLA~El  264 (405)
T 3zu3_A          206 DWQMWIDALLDAGVLA------EGAQTTAFTYLGEKI---------------THDIYWNGSIGAAKKDLDQKVLAIRESL  264 (405)
T ss_dssp             HHHHHHHHHHHHTCEE------EEEEEEEEECCCCGG---------------GTTTTTTSHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHhhhh------CCcEEEEEeCchhhC---------------cCCCccchHHHHHHHHHHHHHHHHHHHh
Confidence            98 777777654 433      358999999988876               56666  899999999999999999999


Q ss_pred             ccC-CCcEEEEEeeCCcccCCcccCCcc
Q 025509          188 KED-GVDITANSVHPGAIATNIIRHNSL  214 (251)
Q Consensus       188 ~~~-g~~i~v~~v~Pg~v~t~~~~~~~~  214 (251)
                      ++. |  |+||+|+||.+.|++....+.
T Consensus       265 a~~~G--IRVNaVaPG~i~T~~s~~ip~  290 (405)
T 3zu3_A          265 AAHGG--GDARVSVLKAVVSQASSAIPM  290 (405)
T ss_dssp             HTTTS--CEEEEEECCCCCCHHHHTSTT
T ss_pred             CcccC--eEEEEEEeCCCcCchhhcCCC
Confidence            999 9  999999999999999876543

>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2

Probab=100.00  E-value=2e-34  Score=242.88  Aligned_cols=191  Identities=26%  Similarity=0.303  Sum_probs=167.0

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      |++|||||++|||+++|++|+++|++|++++|+..++++..+++.+......+.++.+|++++++++++++++.+.++++
T Consensus        33 k~vlVTGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~i  112 (279)
T 1xg5_A           33 RLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAIRSQHSGV  112 (279)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHHHHHHHCCC
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCCEEEEEECChHHHHHHHHHHHhcCCCceEEEEEecCCCHHHHHHHHHHHHHhCCCC
Confidence            58999999999999999999999999999999998888888777665434578899999999999999999998889999


Q ss_pred             eEEEEcCCCCC--CCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccccCC
Q 025509           81 NILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKIN  158 (251)
Q Consensus        81 d~lv~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~  158 (251)
                      |+||||||...  ++.+.+.++|+..+++|+.+++.+++.++|.|++++.   ..++||++||..+...           
T Consensus       113 D~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~~~---~~g~iv~isS~~~~~~-----------  178 (279)
T 1xg5_A          113 DICINNAGLARPDTLLSGSTSGWKDMFNVNVLALSICTREAYQSMKERNV---DDGHIININSMSGHRV-----------  178 (279)
T ss_dssp             SEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTC---CSCEEEEECCGGGTSC-----------
T ss_pred             CEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCC---CCceEEEEcChhhccc-----------
Confidence            99999999753  3556788999999999999999999999999987510   1389999999876520           


Q ss_pred             CCCCCCcccccchhHHHHHHHHHHHHHHhc--cCCCcEEEEEeeCCcccCCcc
Q 025509          159 DPSGYNGFRAYSQSKLANILHANELARRLK--EDGVDITANSVHPGAIATNII  209 (251)
Q Consensus       159 ~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~--~~g~~i~v~~v~Pg~v~t~~~  209 (251)
                        .+.++...|+++|++++.|+++++.|+.  +.|  |++++|+||++.|++.
T Consensus       179 --~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~--i~v~~v~Pg~v~t~~~  227 (279)
T 1xg5_A          179 --LPLSVTHFYSATKYAVTALTEGLRQELREAQTH--IRATCISPGVVETQFA  227 (279)
T ss_dssp             --CSCGGGHHHHHHHHHHHHHHHHHHHHHHHTTCC--CEEEEEEESCBCSSHH
T ss_pred             --CCCCCCchhHHHHHHHHHHHHHHHHHHhhcCCC--eEEEEEecCcccchhh
Confidence              1556678999999999999999999998  677  9999999999999985

>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A

Probab=100.00  E-value=1.4e-34  Score=239.78  Aligned_cols=187  Identities=26%  Similarity=0.289  Sum_probs=165.4

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      |++|||||++|||++++++|+++|++|++++|+.+.+++..+++..   ...+.++.+|++++++++++++++.+.++++
T Consensus         7 k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   83 (251)
T 1zk4_A            7 KVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGT---PDQIQFFQHDSSDEDGWTKLFDATEKAFGPV   83 (251)
T ss_dssp             CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCC---TTTEEEEECCTTCHHHHHHHHHHHHHHHSSC
T ss_pred             cEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhc---cCceEEEECCCCCHHHHHHHHHHHHHHhCCC
Confidence            6899999999999999999999999999999998777766655522   2468999999999999999999999889999


Q ss_pred             eEEEEcCCCCC--CCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCC-ceEEEEcCccccccccCCcccccC
Q 025509           81 NILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGE-GRIINVSSEGHRLAYHEGIRFDKI  157 (251)
Q Consensus        81 d~lv~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~-g~iv~vsS~~~~~~~~~~~~~~~~  157 (251)
                      |+||||||...  +..+.+.++|++.+++|+.+++.+++.++|.|+++     +. ++||++||..+..           
T Consensus        84 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~-----~~~~~iv~isS~~~~~-----------  147 (251)
T 1zk4_A           84 STLVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNK-----GLGASIINMSSIEGFV-----------  147 (251)
T ss_dssp             CEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTS-----SSCEEEEEECCGGGTS-----------
T ss_pred             CEEEECCCCCCCCChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhc-----CCCCEEEEeCCchhcc-----------
Confidence            99999999753  35677889999999999999999999999999774     33 7999999988765           


Q ss_pred             CCCCCCCcccccchhHHHHHHHHHHHHHHhc--cCCCcEEEEEeeCCcccCCcccCC
Q 025509          158 NDPSGYNGFRAYSQSKLANILHANELARRLK--EDGVDITANSVHPGAIATNIIRHN  212 (251)
Q Consensus       158 ~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~--~~g~~i~v~~v~Pg~v~t~~~~~~  212 (251)
                          +.++...|+++|++++.|+++++.|+.  +.|  |++++|+||++.|++....
T Consensus       148 ----~~~~~~~Y~~sK~a~~~~~~~~a~e~~~~~~~--i~v~~v~Pg~v~t~~~~~~  198 (251)
T 1zk4_A          148 ----GDPSLGAYNASKGAVRIMSKSAALDCALKDYD--VRVNTVHPGYIKTPLVDDL  198 (251)
T ss_dssp             ----CCTTCHHHHHHHHHHHHHHHHHHHHHHHTTCS--EEEEEEEECCBCCHHHHTS
T ss_pred             ----CCCCCccchHHHHHHHHHHHHHHHHhcccCCC--eEEEEEeeCcCcchhhhhc
Confidence                566778999999999999999999998  777  9999999999999987653

>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A*

Probab=100.00  E-value=1.1e-34  Score=239.79  Aligned_cols=188  Identities=31%  Similarity=0.347  Sum_probs=168.1

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      |++|||||++|||++++++|+++|++|++++|+.+++++..+++.+.. +..+.++.+|++|.++++++++++.+.++++
T Consensus         8 ~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   86 (248)
T 2pnf_A            8 KVSLVTGSTRGIGRAIAEKLASAGSTVIITGTSGERAKAVAEEIANKY-GVKAHGVEMNLLSEESINKAFEEIYNLVDGI   86 (248)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHH-CCCEEEEECCTTCHHHHHHHHHHHHHHSSCC
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhc-CCceEEEEccCCCHHHHHHHHHHHHHhcCCC
Confidence            579999999999999999999999999999999888887777765422 4578999999999999999999999999999


Q ss_pred             eEEEEcCCCCC--CCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccccCC
Q 025509           81 NILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKIN  158 (251)
Q Consensus        81 d~lv~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~  158 (251)
                      |+||||||...  +..+.+.++|++.+++|+.+++.++++++|.++++     +.++||++||..+..            
T Consensus        87 d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~-----~~~~iv~~sS~~~~~------------  149 (248)
T 2pnf_A           87 DILVNNAGITRDKLFLRMSLLDWEEVLKVNLTGTFLVTQNSLRKMIKQ-----RWGRIVNISSVVGFT------------  149 (248)
T ss_dssp             SEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHCHHHHHH-----TCEEEEEECCHHHHH------------
T ss_pred             CEEEECCCCCCCCccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhc-----CCcEEEEEccHHhcC------------
Confidence            99999999754  34567889999999999999999999999999876     468999999987765            


Q ss_pred             CCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccC
Q 025509          159 DPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  211 (251)
Q Consensus       159 ~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  211 (251)
                         +.++...|+++|++++.|+++++.|+.+.|  |++++|+||++.|++...
T Consensus       150 ---~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~--i~v~~v~Pg~v~t~~~~~  197 (248)
T 2pnf_A          150 ---GNVGQVNYSTTKAGLIGFTKSLAKELAPRN--VLVNAVAPGFIETDMTAV  197 (248)
T ss_dssp             ---CCTTCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECSBCCGGGGG
T ss_pred             ---CCCCCchHHHHHHHHHHHHHHHHHHhcccC--eEEEEEEeceecCchhhh
Confidence               556778999999999999999999999888  999999999999998764

>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens}

Probab=100.00  E-value=8.8e-35  Score=242.67  Aligned_cols=190  Identities=29%  Similarity=0.347  Sum_probs=162.9

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhC-----CCCceEEEEecCCCHHHHHHHHHHHHh
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEI-----PSAKVDAMELDLSSLASVRNFASEYNI   75 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~-----~~~~v~~~~~D~~~~~~i~~~~~~~~~   75 (251)
                      |++|||||++|||+++|++|+++|++|++++|+...+++..+++.+..     +..++.++.+|+++.++++++++++.+
T Consensus         8 k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   87 (264)
T 2pd6_A            8 ALALVTGAGSGIGRAVSVRLAGEGATVAACDLDRAAAQETVRLLGGPGSKEGPPRGNHAAFQADVSEARAARCLLEQVQA   87 (264)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTC------------CCEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCccccccCcceEEEEecCCCHHHHHHHHHHHHH
Confidence            579999999999999999999999999999999887777665553321     115688999999999999999999998


Q ss_pred             cCCCe-eEEEEcCCCCCC--CCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCc
Q 025509           76 QHHQL-NILINNAGIMGT--PFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGI  152 (251)
Q Consensus        76 ~~g~i-d~lv~~ag~~~~--~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~  152 (251)
                      .++++ |+||||||....  +.+.+.++|++.+++|+.+++.++++++|.|.+++    ..++||++||..+..      
T Consensus        88 ~~g~i~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~----~~g~iv~isS~~~~~------  157 (264)
T 2pd6_A           88 CFSRPPSVVVSCAGITQDEFLLHMSEDDWDKVIAVNLKGTFLVTQAAAQALVSNG----CRGSIINISSIVGKV------  157 (264)
T ss_dssp             HHSSCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT----CCEEEEEECCTHHHH------
T ss_pred             HhCCCCeEEEECCCcCCCcchhhCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcC----CCceEEEECChhhcc------
Confidence            89998 999999997643  45678899999999999999999999999998751    158999999988776      


Q ss_pred             ccccCCCCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccC
Q 025509          153 RFDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  211 (251)
Q Consensus       153 ~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  211 (251)
                               +.++...|+++|++++.|+++++.|+.+.|  |++++|+||++.|++...
T Consensus       158 ---------~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g--i~v~~v~Pg~v~t~~~~~  205 (264)
T 2pd6_A          158 ---------GNVGQTNYAASKAGVIGLTQTAARELGRHG--IRCNSVLPGFIATPMTQK  205 (264)
T ss_dssp             ---------CCTTBHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECSBCSCC---
T ss_pred             ---------CCCCChhhHHHHHHHHHHHHHHHHHhhhcC--eEEEEEeeecccccchhh
Confidence                     567788999999999999999999999988  999999999999998764

>1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2

Probab=100.00  E-value=2.1e-34  Score=240.39  Aligned_cols=197  Identities=24%  Similarity=0.311  Sum_probs=166.5

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      |++|||||++|||++++++|+++|++|++++|+..+..+..+++.+.. +.++.++.+|++|.++++++++++.+.++++
T Consensus        15 k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i   93 (265)
T 1h5q_A           15 KTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEF-GVKTKAYQCDVSNTDIVTKTIQQIDADLGPI   93 (265)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCTTHHHHHHHHHHHH-TCCEEEEECCTTCHHHHHHHHHHHHHHSCSE
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCCeEEEEeCcchhhHHHHHHHHHhc-CCeeEEEEeeCCCHHHHHHHHHHHHHhcCCC
Confidence            479999999999999999999999999999998777666666665443 4568999999999999999999999999999


Q ss_pred             eEEEEcCCCCC--CCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccccCC
Q 025509           81 NILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKIN  158 (251)
Q Consensus        81 d~lv~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~  158 (251)
                      |+||||||...  +..+.+.++|++.+++|+.+++.++++++|.+.+++    ..++||++||..+.......       
T Consensus        94 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~----~~~~iv~~sS~~~~~~~~~~-------  162 (265)
T 1h5q_A           94 SGLIANAGVSVVKPATELTHEDFAFVYDVNVFGVFNTCRAVAKLWLQKQ----QKGSIVVTSSMSSQIINQSS-------  162 (265)
T ss_dssp             EEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT----CCEEEEEECCGGGTSCCEEE-------
T ss_pred             CEEEECCCcCCCCchhhCCHHHHHHHHhhhhHhHHHHHHHHHHHHHhcC----CCceEEEeCCchhhcccccc-------
Confidence            99999999753  345678899999999999999999999999998751    24899999998765421100       


Q ss_pred             CCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCC
Q 025509          159 DPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRHN  212 (251)
Q Consensus       159 ~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~~  212 (251)
                       ..+..+...|+++|++++.|+++++.|+.+.|  |++++|+||++.|++....
T Consensus       163 -~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g--i~v~~v~Pg~v~t~~~~~~  213 (265)
T 1h5q_A          163 -LNGSLTQVFYNSSKAACSNLVKGLAAEWASAG--IRVNALSPGYVNTDQTAHM  213 (265)
T ss_dssp             -TTEECSCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECSBCCGGGGGS
T ss_pred             -ccccccccccHHHHHHHHHHHHHHHHHHHhcC--cEEEEEecCcccccccccc
Confidence             01222367899999999999999999999988  9999999999999997653

>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum}

Probab=100.00  E-value=7.9e-35  Score=240.69  Aligned_cols=187  Identities=25%  Similarity=0.345  Sum_probs=151.4

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEE-ecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCC
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMG-VRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQ   79 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~-~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~   79 (251)
                      |++|||||++|||+++|++|+++|++|+++ .|++..+++..+++.+.  +.++.++.+|++|+++++++++++.+.+++
T Consensus         6 ~~vlItGasggiG~~~a~~l~~~G~~V~~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   83 (247)
T 2hq1_A            6 KTAIVTGSSRGLGKAIAWKLGNMGANIVLNGSPASTSLDATAEEFKAA--GINVVVAKGDVKNPEDVENMVKTAMDAFGR   83 (247)
T ss_dssp             CEEEESSCSSHHHHHHHHHHHHTTCEEEEEECTTCSHHHHHHHHHHHT--TCCEEEEESCTTSHHHHHHHHHHHHHHHSC
T ss_pred             cEEEEECCCchHHHHHHHHHHHCCCEEEEEcCcCHHHHHHHHHHHHhc--CCcEEEEECCCCCHHHHHHHHHHHHHhcCC
Confidence            589999999999999999999999999998 67777777777766553  457899999999999999999999988999


Q ss_pred             eeEEEEcCCCCC--CCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccccC
Q 025509           80 LNILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKI  157 (251)
Q Consensus        80 id~lv~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~  157 (251)
                      +|+||||||...  ++.+.+.++|++.+++|+.+++.++++++|.|+++     +.++||++||..+..           
T Consensus        84 ~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~-----~~~~iv~~sS~~~~~-----------  147 (247)
T 2hq1_A           84 IDILVNNAGITRDTLMLKMSEKDWDDVLNTNLKSAYLCTKAVSKIMLKQ-----KSGKIINITSIAGII-----------  147 (247)
T ss_dssp             CCEEEECC---------------CHHHHHHTHHHHHHHHHHHHHHHHHH-----TCEEEEEECC----------------
T ss_pred             CCEEEECCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-----CCcEEEEEcChhhcc-----------
Confidence            999999999753  34567888999999999999999999999999876     468999999987665           


Q ss_pred             CCCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccC
Q 025509          158 NDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  211 (251)
Q Consensus       158 ~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  211 (251)
                          +.++...|+++|++++.|+++++.|+.+.|  |++|+|+||++.|++...
T Consensus       148 ----~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g--i~v~~v~Pg~v~t~~~~~  195 (247)
T 2hq1_A          148 ----GNAGQANYAASKAGLIGFTKSIAKEFAAKG--IYCNAVAPGIIKTDMTDV  195 (247)
T ss_dssp             --------CHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECSBCCHHHHT
T ss_pred             ----CCCCCcHhHHHHHHHHHHHHHHHHHHHHcC--cEEEEEEEEEEeccchhh
Confidence                566778999999999999999999999988  999999999999998654

>2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ...

Probab=100.00  E-value=1.2e-35  Score=249.21  Aligned_cols=180  Identities=19%  Similarity=0.226  Sum_probs=157.8

Q ss_pred             CEEEEECC--CChhHHHHHHHHHHcCCEEEEEecCchhH-HHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcC
Q 025509            1 MDIVITGA--TSGIGTETARVLALRGVHVVMGVRDIAAG-KDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQH   77 (251)
Q Consensus         1 k~vlItG~--s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~-~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~   77 (251)
                      |++|||||  ++|||+++|++|+++|++|++++|+..+. ++.    .+.. +.++.++++|++++++++++++++.+++
T Consensus         8 k~vlVTGa~~s~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~----~~~~-~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   82 (269)
T 2h7i_A            8 KRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQRI----TDRL-PAKAPLLELDVQNEEHLASLAGRVTEAI   82 (269)
T ss_dssp             CEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEECSCHHHHHHH----HTTS-SSCCCEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CEEEEECCCCCCchHHHHHHHHHHCCCEEEEEecChHHHHHHH----HHhc-CCCceEEEccCCCHHHHHHHHHHHHHHh
Confidence            58999999  99999999999999999999999987552 333    2333 3468899999999999999999999988


Q ss_pred             C---CeeEEEEcCCCCC-------CCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCcccccc
Q 025509           78 H---QLNILINNAGIMG-------TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLA  147 (251)
Q Consensus        78 g---~id~lv~~ag~~~-------~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~  147 (251)
                      |   ++|+||||||+..       ++.+.+.++|++.+++|+.+++.++++++|+|.+       .|+||++||..+ . 
T Consensus        83 g~~~~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~-------~g~iv~iss~~~-~-  153 (269)
T 2h7i_A           83 GAGNKLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHISAYSYASMAKALLPIMNP-------GGSIVGMDFDPS-R-  153 (269)
T ss_dssp             CTTCCEEEEEECCCCCCGGGSTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE-------EEEEEEEECCCS-S-
T ss_pred             CCCCCceEEEECCccCccccccccccccCCHHHHHHHHHHhhHHHHHHHHHHHHhhcc-------CCeEEEEcCccc-c-
Confidence            8   9999999999754       3567788999999999999999999999999854       379999999654 2 


Q ss_pred             ccCCcccccCCCCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCccc
Q 025509          148 YHEGIRFDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIR  210 (251)
Q Consensus       148 ~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~  210 (251)
                                    +.+.+..|++||+++++|+++++.|++++|  |+||+|+||+++|++..
T Consensus       154 --------------~~~~~~~Y~asKaa~~~l~~~la~e~~~~g--i~vn~v~PG~v~T~~~~  200 (269)
T 2h7i_A          154 --------------AMPAYNWMTVAKSALESVNRFVAREAGKYG--VRSNLVAAGPIRTLAMS  200 (269)
T ss_dssp             --------------CCTTTHHHHHHHHHHHHHHHHHHHHHHTTT--CEEEEEEECCCCCHHHH
T ss_pred             --------------ccCchHHHHHHHHHHHHHHHHHHHHhcccC--cEEEEEecCcccchhhh
Confidence                          566778999999999999999999999999  99999999999999865

>2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8}

Probab=100.00  E-value=1.1e-34  Score=239.31  Aligned_cols=187  Identities=27%  Similarity=0.330  Sum_probs=166.5

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEE-ecCchhHHHHHHHHHhhCCCCceEE-EEecCCCHHHHHHHHHHHHhcCC
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMG-VRDIAAGKDVKETIVKEIPSAKVDA-MELDLSSLASVRNFASEYNIQHH   78 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~-~r~~~~~~~~~~~~~~~~~~~~v~~-~~~D~~~~~~i~~~~~~~~~~~g   78 (251)
                      |++|||||++|||+++|++|+++|++|+++ +|+.+++++..+++.+.  +..+.+ +.+|+++.++++++++++.+.++
T Consensus         2 k~vlITGasggiG~~~a~~l~~~G~~v~~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   79 (245)
T 2ph3_A            2 RKALITGASRGIGRAIALRLAEDGFALAIHYGQNREKAEEVAEEARRR--GSPLVAVLGANLLEAEAATALVHQAAEVLG   79 (245)
T ss_dssp             CEEEETTTTSHHHHHHHHHHHTTTCEEEEEESSCHHHHHHHHHHHHHT--TCSCEEEEECCTTSHHHHHHHHHHHHHHHT
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhc--CCceEEEEeccCCCHHHHHHHHHHHHHhcC
Confidence            689999999999999999999999999998 89888887777776553  345666 89999999999999999998889


Q ss_pred             CeeEEEEcCCCCCC--CCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCccccc
Q 025509           79 QLNILINNAGIMGT--PFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDK  156 (251)
Q Consensus        79 ~id~lv~~ag~~~~--~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~  156 (251)
                      ++|+||||||....  +.+.+.++|++.+++|+.+++.++++++|.|+++     +.++||++||..+..          
T Consensus        80 ~~d~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~-----~~~~iv~~sS~~~~~----------  144 (245)
T 2ph3_A           80 GLDTLVNNAGITRDTLLVRMKDEDWEAVLEANLSAVFRTTREAVKLMMKA-----RFGRIVNITSVVGIL----------  144 (245)
T ss_dssp             CCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----TCEEEEEECCTHHHH----------
T ss_pred             CCCEEEECCCCCCCCCcccCCHHHHHHHHhhccHHHHHHHHHHHHHHHhc-----CCCEEEEEeChhhcc----------
Confidence            99999999997643  4567889999999999999999999999999876     468999999988766          


Q ss_pred             CCCCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccC
Q 025509          157 INDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  211 (251)
Q Consensus       157 ~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  211 (251)
                           +.++...|+++|++++.++++++.|+.+.|  |++++|+||++.|++...
T Consensus       145 -----~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g--i~v~~v~Pg~v~t~~~~~  192 (245)
T 2ph3_A          145 -----GNPGQANYVASKAGLIGFTRAVAKEYAQRG--ITVNAVAPGFIETEMTER  192 (245)
T ss_dssp             -----CCSSBHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECSBCCHHHHT
T ss_pred             -----CCCCCcchHHHHHHHHHHHHHHHHHHHHcC--eEEEEEEEEeecCcchhh
Confidence                 566778999999999999999999999888  999999999999998764

>1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A*

Probab=100.00  E-value=5.6e-35  Score=243.17  Aligned_cols=180  Identities=17%  Similarity=0.187  Sum_probs=155.9

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      |++|||||++|||+++|++|+++|++|++++|+.+++++..+ +.+.  +.++.++     |.++++++++++.++++++
T Consensus         2 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~-l~~~--~~~~~~~-----d~~~v~~~~~~~~~~~g~i   73 (254)
T 1zmt_A            2 STAIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDELEA-FAET--YPQLKPM-----SEQEPAELIEAVTSAYGQV   73 (254)
T ss_dssp             CEEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHH-HHHH--CTTSEEC-----CCCSHHHHHHHHHHHHSCC
T ss_pred             eEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-HHhc--CCcEEEE-----CHHHHHHHHHHHHHHhCCC
Confidence            689999999999999999999999999999999888777665 5443  3344443     6677888888888888999


Q ss_pred             eEEEEcCCCC-C--CCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccccC
Q 025509           81 NILINNAGIM-G--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKI  157 (251)
Q Consensus        81 d~lv~~ag~~-~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~  157 (251)
                      |+||||||+. .  ++.+.+.++|++.+++|+.+++.++++++|+|+++     +.|+||++||..+..           
T Consensus        74 D~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~-----~~g~iv~isS~~~~~-----------  137 (254)
T 1zmt_A           74 DVLVSNDIFAPEFQPIDKYAVEDYRGAVEALQIRPFALVNAVASQMKKR-----KSGHIIFITSATPFG-----------  137 (254)
T ss_dssp             CEEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----TCCEEEEECCSTTTS-----------
T ss_pred             CEEEECCCcCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-----CCcEEEEECCccccc-----------
Confidence            9999999976 3  35677889999999999999999999999999876     468999999988765           


Q ss_pred             CCCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcc---------cCCccc
Q 025509          158 NDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAI---------ATNIIR  210 (251)
Q Consensus       158 ~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v---------~t~~~~  210 (251)
                          +.++...|++||+++++|+++++.|++++|  |+||+|+||++         +|++..
T Consensus       138 ----~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g--i~v~~v~PG~v~~~~~~~~~~T~~~~  193 (254)
T 1zmt_A          138 ----PWKELSTYTSARAGACTLANALSKELGEYN--IPVFAIGPNYLHSEDSPYFYPTEPWK  193 (254)
T ss_dssp             ----CCTTCHHHHHHHHHHHHHHHHHHHHHGGGT--CCEEEEEESSBCCBTCCSSCBHHHHT
T ss_pred             ----CCCCchHHHHHHHHHHHHHHHHHHHhhhcC--cEEEEEecCccccccccccCCCcccc
Confidence                567788999999999999999999999999  99999999999         776654

>3s8m_A Enoyl-ACP reductase; rossmann fold, oxidoreductase, NADH binding, fatty acid SYNT enoyl-ACP; 1.60A {Xanthomonas oryzae PV}

Probab=100.00  E-value=2.4e-35  Score=258.38  Aligned_cols=189  Identities=15%  Similarity=0.097  Sum_probs=158.5

Q ss_pred             CEEEEECCCChhHHHHHHHHHH-cCCEEEEEecCchhHHH------------HHHHHHhhCCCCceEEEEecCCCHHHHH
Q 025509            1 MDIVITGATSGIGTETARVLAL-RGVHVVMGVRDIAAGKD------------VKETIVKEIPSAKVDAMELDLSSLASVR   67 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~-~G~~Vi~~~r~~~~~~~------------~~~~~~~~~~~~~v~~~~~D~~~~~~i~   67 (251)
                      |++||||||+|||+++|+.|++ .|++|++++|+.+.+++            ..+.+.+.  +..+..+.+|+++.++++
T Consensus        62 KvaLVTGASsGIG~AiA~~LA~~~GA~Vv~~~r~~~~~~~~~~~ag~~n~~a~~~~~~~~--G~~a~~i~~Dvtd~~~v~  139 (422)
T 3s8m_A           62 KKVLVIGASSGYGLASRITAAFGFGADTLGVFFEKPGTASKAGTAGWYNSAAFDKHAKAA--GLYSKSINGDAFSDAARA  139 (422)
T ss_dssp             SEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHT--TCCEEEEESCTTSHHHHH
T ss_pred             CEEEEECCChHHHHHHHHHHHHhCCCEEEEEeCCchhhhhhhcccccchhHHHHHHHHhc--CCcEEEEEecCCCHHHHH
Confidence            6899999999999999999999 99999999998654332            22334333  567889999999999999


Q ss_pred             HHHHHHHhcC-CCeeEEEEcCCCC---------------CCC---------------------CcCCchhhHHHHHHHHH
Q 025509           68 NFASEYNIQH-HQLNILINNAGIM---------------GTP---------------------FMLSKDNIELQFATNHL  110 (251)
Q Consensus        68 ~~~~~~~~~~-g~id~lv~~ag~~---------------~~~---------------------~~~~~~~~~~~~~~n~~  110 (251)
                      ++++++.+++ |++|+||||||..               .++                     .+++.++|+..+++|..
T Consensus       140 ~~v~~i~~~~~G~IDiLVNNAG~~~r~~p~~G~~~~~~~~p~~~~~~~~~~d~~~~~~~~~~~~~~t~e~~~~~v~Vn~~  219 (422)
T 3s8m_A          140 QVIELIKTEMGGQVDLVVYSLASPVRKLPGSGEVKRSALKPIGQTYTATAIDTNKDTIIQASIEPASAQEIEDTITVMGG  219 (422)
T ss_dssp             HHHHHHHHHSCSCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEEETTTTEEEEEEECCCCHHHHHHHHHHHSS
T ss_pred             HHHHHHHHHcCCCCCEEEEcCccccccccccccccccccccccccccccccccccccccccccCCCCHHHHHHHHHhhch
Confidence            9999999999 9999999999862               122                     24688999999999999


Q ss_pred             HHH-HHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccccCCCCCCCCcc--cccchhHHHHHHHHHHHHHHh
Q 025509          111 GHF-LLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGF--RAYSQSKLANILHANELARRL  187 (251)
Q Consensus       111 ~~~-~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~--~~Y~~sK~a~~~~~~~la~e~  187 (251)
                      +.+ .+++++.+.+..+     ++|+||++||.++..               +.+.+  .+|++||+|+.+|+++||.|+
T Consensus       220 ~~~~~~~~a~~~~~m~~-----~gG~IVniSSi~g~~---------------~~p~~~~~aY~ASKaAl~~lTrsLA~El  279 (422)
T 3s8m_A          220 QDWELWIDALEGAGVLA-----DGARSVAFSYIGTEI---------------TWPIYWHGALGKAKVDLDRTAQRLNARL  279 (422)
T ss_dssp             HHHHHHHHHHHHTTCEE-----EEEEEEEEEECCCGG---------------GHHHHTSHHHHHHHHHHHHHHHHHHHHH
T ss_pred             hHHHHHHHHHHHHHHhh-----CCCEEEEEeCchhhc---------------cCCCccchHHHHHHHHHHHHHHHHHHHh
Confidence            887 7777776543222     358999999988776               55655  899999999999999999999


Q ss_pred             ccCCCcEEEEEeeCCcccCCcccCCc
Q 025509          188 KEDGVDITANSVHPGAIATNIIRHNS  213 (251)
Q Consensus       188 ~~~g~~i~v~~v~Pg~v~t~~~~~~~  213 (251)
                      ++.|  |+||+|+||+|.|++....+
T Consensus       280 a~~G--IRVNaVaPG~i~T~~~~~ip  303 (422)
T 3s8m_A          280 AKHG--GGANVAVLKSVVTQASAAIP  303 (422)
T ss_dssp             HTTT--CEEEEEEECCCCCTTGGGST
T ss_pred             CccC--EEEEEEEcCCCcChhhhcCC
Confidence            9999  99999999999999987654

>4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp}

Probab=100.00  E-value=2.9e-35  Score=243.46  Aligned_cols=173  Identities=21%  Similarity=0.256  Sum_probs=153.9

Q ss_pred             CEEEEECCCChhHHHHHHHHHH-cCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCC
Q 025509            1 MDIVITGATSGIGTETARVLAL-RGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQ   79 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~-~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~   79 (251)
                      |++|||||++|||+++|++|++ .|++|++.+|++..            ....+.++++|+++.++++++++.+.  +++
T Consensus         5 k~vlITGas~gIG~~~a~~l~~~~g~~v~~~~~~~~~------------~~~~~~~~~~Dv~~~~~v~~~~~~~~--~~~   70 (244)
T 4e4y_A            5 ANYLVTGGSKGIGKAVVELLLQNKNHTVINIDIQQSF------------SAENLKFIKADLTKQQDITNVLDIIK--NVS   70 (244)
T ss_dssp             EEEEEETTTSHHHHHHHHHHTTSTTEEEEEEESSCCC------------CCTTEEEEECCTTCHHHHHHHHHHTT--TCC
T ss_pred             CeEEEeCCCChHHHHHHHHHHhcCCcEEEEecccccc------------ccccceEEecCcCCHHHHHHHHHHHH--hCC
Confidence            5799999999999999999999 78899999997641            13467899999999999999996553  679


Q ss_pred             eeEEEEcCCCCC--CCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccccC
Q 025509           80 LNILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKI  157 (251)
Q Consensus        80 id~lv~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~  157 (251)
                      +|+||||||+..  ++.+.+.++|++.+++|+.+++.++++++|+|++       .++||++||..+..           
T Consensus        71 id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~-------~g~iv~~sS~~~~~-----------  132 (244)
T 4e4y_A           71 FDGIFLNAGILIKGSIFDIDIESIKKVLDLNVWSSIYFIKGLENNLKV-------GASIVFNGSDQCFI-----------  132 (244)
T ss_dssp             EEEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHTGGGEEE-------EEEEEEECCGGGTC-----------
T ss_pred             CCEEEECCccCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHhcc-------CcEEEEECCHHHcc-----------
Confidence            999999999764  4667899999999999999999999999998865       37999999988776           


Q ss_pred             CCCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccC
Q 025509          158 NDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  211 (251)
Q Consensus       158 ~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  211 (251)
                          +.++...|++||+|+++|+++|+.|++++|  |+||+|+||+++|++...
T Consensus       133 ----~~~~~~~Y~asKaa~~~~~~~la~e~~~~g--i~v~~v~PG~v~T~~~~~  180 (244)
T 4e4y_A          133 ----AKPNSFAYTLSKGAIAQMTKSLALDLAKYQ--IRVNTVCPGTVDTDLYRN  180 (244)
T ss_dssp             ----CCTTBHHHHHHHHHHHHHHHHHHHHHGGGT--CEEEEEEESCBCCHHHHH
T ss_pred             ----CCCCCchhHHHHHHHHHHHHHHHHHHHHcC--eEEEEEecCccCchhhHH
Confidence                677888999999999999999999999999  999999999999998764

>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A*

Probab=100.00  E-value=3.4e-34  Score=237.82  Aligned_cols=183  Identities=26%  Similarity=0.315  Sum_probs=162.0

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCce-EEEEecCCCHHHHHHHHHHHHhcCCC
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKV-DAMELDLSSLASVRNFASEYNIQHHQ   79 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v-~~~~~D~~~~~~i~~~~~~~~~~~g~   79 (251)
                      |++|||||++|||+++|++|+++|++|++++|+.+++++..+++     +..+ .++.+|+++.++++++++++.+ +++
T Consensus        12 k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~~D~~~~~~~~~~~~~~~~-~~~   85 (254)
T 2wsb_A           12 ACAAVTGAGSGIGLEICRAFAASGARLILIDREAAALDRAAQEL-----GAAVAARIVADVTDAEAMTAAAAEAEA-VAP   85 (254)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH-----GGGEEEEEECCTTCHHHHHHHHHHHHH-HSC
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-----cccceeEEEEecCCHHHHHHHHHHHHh-hCC
Confidence            57999999999999999999999999999999988777766655     3456 8899999999999999999888 889


Q ss_pred             eeEEEEcCCCCC--CCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccccC
Q 025509           80 LNILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKI  157 (251)
Q Consensus        80 id~lv~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~  157 (251)
                      +|+||||||...  +..+.+.++|++.+++|+.+++.++++++|.++++     +.++||++||..+..           
T Consensus        86 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~-----~~~~iv~isS~~~~~-----------  149 (254)
T 2wsb_A           86 VSILVNSAGIARLHDALETDDATWRQVMAVNVDGMFWASRAFGRAMVAR-----GAGAIVNLGSMSGTI-----------  149 (254)
T ss_dssp             CCEEEECCCCCCCBCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----TCEEEEEECCGGGTS-----------
T ss_pred             CcEEEECCccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-----CCcEEEEEecchhcc-----------
Confidence            999999999754  35567889999999999999999999999999886     468999999987765           


Q ss_pred             CCCCCCCcc--cccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccC
Q 025509          158 NDPSGYNGF--RAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  211 (251)
Q Consensus       158 ~~~~~~~~~--~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  211 (251)
                          +.+..  ..|+++|++++.++++++.|+.+.|  |++++|+||++.|++...
T Consensus       150 ----~~~~~~~~~Y~~sK~a~~~~~~~~~~~~~~~g--i~v~~v~Pg~v~t~~~~~  199 (254)
T 2wsb_A          150 ----VNRPQFASSYMASKGAVHQLTRALAAEWAGRG--VRVNALAPGYVATEMTLK  199 (254)
T ss_dssp             ----CCSSSCBHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECCBCSHHHHH
T ss_pred             ----CCCCCcchHHHHHHHHHHHHHHHHHHHHhhcC--eEEEEEEecccCchhhhc
Confidence                33444  7899999999999999999999888  999999999999998653

>2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2

Probab=100.00  E-value=8.1e-35  Score=241.04  Aligned_cols=177  Identities=24%  Similarity=0.336  Sum_probs=153.4

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      |++|||||++|||+++|++|+++|++|++++|+++++++.. +    .  .++.++.+|+++.++++++    .++++++
T Consensus         7 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~-~----~--~~~~~~~~D~~~~~~~~~~----~~~~~~i   75 (246)
T 2ag5_A            7 KVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELE-K----Y--PGIQTRVLDVTKKKQIDQF----ANEVERL   75 (246)
T ss_dssp             CEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHGGGG-G----S--TTEEEEECCTTCHHHHHHH----HHHCSCC
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-h----c--cCceEEEeeCCCHHHHHHH----HHHhCCC
Confidence            68999999999999999999999999999999876654432 1    1  2688899999999998844    3456899


Q ss_pred             eEEEEcCCCCC--CCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccccCC
Q 025509           81 NILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKIN  158 (251)
Q Consensus        81 d~lv~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~  158 (251)
                      |+||||||...  ++.+.+.++|++.+++|+.+++.++++++|+|+++     +.++||++||.++..            
T Consensus        76 d~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~-----~~g~iv~isS~~~~~------------  138 (246)
T 2ag5_A           76 DVLFNVAGFVHHGTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQ-----KSGNIINMSSVASSV------------  138 (246)
T ss_dssp             SEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----TCEEEEEECCSBTTT------------
T ss_pred             CEEEECCccCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-----CCceEEEEechHhCc------------
Confidence            99999999754  35577889999999999999999999999999876     468999999987765            


Q ss_pred             CCCCCC-cccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCccc
Q 025509          159 DPSGYN-GFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIR  210 (251)
Q Consensus       159 ~~~~~~-~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~  210 (251)
                         +.+ +...|++||+++++|+++++.|+++.|  |+||+|+||++.|++..
T Consensus       139 ---~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g--i~v~~v~Pg~v~t~~~~  186 (246)
T 2ag5_A          139 ---KGVVNRCVYSTTKAAVIGLTKSVAADFIQQG--IRCNCVCPGTVDTPSLQ  186 (246)
T ss_dssp             ---BCCTTBHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEESCEECHHHH
T ss_pred             ---CCCCCCccHHHHHHHHHHHHHHHHHHhhhcC--cEEEEEeeCcCcCcchh
Confidence               344 677999999999999999999999999  99999999999999865

>1jtv_A 17 beta-hydroxysteroid dehydrogenase type 1; steroid hormones, alternative binding mode, oxidoreductase; HET: TES; 1.54A {Homo sapiens} SCOP: c.2.1.2 PDB: 1dht_A* 1equ_A* 1bhs_A* 1i5r_A* 1qyv_A* 1qyw_A* 1qyx_A* 3dey_X* 3dhe_A* 3hb4_X* 3hb5_X* 3klp_X* 3km0_A* 1iol_A* 1fds_A* 1fdt_A* 3klm_X* 1fdw_A* 1fdu_A* 1fdv_A* ...

Probab=100.00  E-value=3.8e-35  Score=252.88  Aligned_cols=187  Identities=23%  Similarity=0.272  Sum_probs=157.3

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhh----CCCCceEEEEecCCCHHHHHHHHHHHHhc
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKE----IPSAKVDAMELDLSSLASVRNFASEYNIQ   76 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~----~~~~~v~~~~~D~~~~~~i~~~~~~~~~~   76 (251)
                      |++|||||++|||+++|++|+++|++|++++|+...+++..+.+.+.    .++.++.++.+|+++.++++++++++.  
T Consensus         3 k~vlVTGas~GIG~ala~~L~~~G~~v~~v~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~--   80 (327)
T 1jtv_A            3 TVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRDSKSVAAARERVT--   80 (327)
T ss_dssp             EEEEESCCSSHHHHHHHHHHHTCTTCCEEEEEEESCGGGTHHHHHHHHHTTCCTTSEEEEECCTTCHHHHHHHHHTCT--
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCceEEEEeecCcHHHHHHHHHHhhhccCCCCceEEEEecCCCHHHHHHHHHHHh--
Confidence            57999999999999999999999999998888765544443333221    124578999999999999999999873  


Q ss_pred             CCCeeEEEEcCCCCC--CCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCccc
Q 025509           77 HHQLNILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRF  154 (251)
Q Consensus        77 ~g~id~lv~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~  154 (251)
                      ++++|+||||||+..  ++.+.+.++|++++++|+.+++.++++++|+|+++     +.++||++||.++..        
T Consensus        81 ~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~-----~~g~IV~isS~~~~~--------  147 (327)
T 1jtv_A           81 EGRVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRR-----GSGRVLVTGSVGGLM--------  147 (327)
T ss_dssp             TSCCSEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----TCEEEEEEEEGGGTS--------
T ss_pred             cCCCCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-----CCCEEEEECCccccc--------
Confidence            579999999999753  35677889999999999999999999999999876     468999999988776        


Q ss_pred             ccCCCCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccC
Q 025509          155 DKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  211 (251)
Q Consensus       155 ~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  211 (251)
                             +.+....|++||+++++|+++++.|+.+.|  |+||+|+||+|+|++...
T Consensus       148 -------~~~~~~~Y~aSK~a~~~~~~~la~el~~~g--I~v~~v~PG~v~T~~~~~  195 (327)
T 1jtv_A          148 -------GLPFNDVYCASKFALEGLCESLAVLLLPFG--VHLSLIECGPVHTAFMEK  195 (327)
T ss_dssp             -------CCTTCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECCBCC-----
T ss_pred             -------CCCCChHHHHHHHHHHHHHHHHHHHhhhcC--cEEEEEEeCcccChHHhh
Confidence                   566778999999999999999999999999  999999999999999764

>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A*

Probab=100.00  E-value=9.1e-35  Score=241.67  Aligned_cols=184  Identities=27%  Similarity=0.331  Sum_probs=159.1

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCE-EEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCH-HHHHHHHHHHHhcCC
Q 025509            1 MDIVITGATSGIGTETARVLALRGVH-VVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSL-ASVRNFASEYNIQHH   78 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~-Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~-~~i~~~~~~~~~~~g   78 (251)
                      |++|||||++|||+++|++|+++|++ |++++|+...  +..+++.+..++..+.++.+|++|. ++++++++++.+.++
T Consensus         6 k~vlVtGas~gIG~~~a~~l~~~G~~~v~~~~r~~~~--~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g   83 (254)
T 1sby_A            6 KNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENP--TALAELKAINPKVNITFHTYDVTVPVAESKKLLKKIFDQLK   83 (254)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTCCSEEEEEESSCCH--HHHHHHHHHCTTSEEEEEECCTTSCHHHHHHHHHHHHHHHS
T ss_pred             cEEEEECCCChHHHHHHHHHHHCCCcEEEEEecCchH--HHHHHHHHhCCCceEEEEEEecCCChHHHHHHHHHHHHhcC
Confidence            68999999999999999999999996 9999998642  3334455555456789999999998 999999999998899


Q ss_pred             CeeEEEEcCCCCCCCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccccCC
Q 025509           79 QLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKIN  158 (251)
Q Consensus        79 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~  158 (251)
                      ++|+||||||+.      +.++|++.+++|+.+++.++++++|+|.++..  ...|+||++||.++..            
T Consensus        84 ~id~lv~~Ag~~------~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~--~~~g~iv~isS~~~~~------------  143 (254)
T 1sby_A           84 TVDILINGAGIL------DDHQIERTIAINFTGLVNTTTAILDFWDKRKG--GPGGIIANICSVTGFN------------  143 (254)
T ss_dssp             CCCEEEECCCCC------CTTCHHHHHHHHTHHHHHHHHHHHHHHCGGGT--CCCEEEEEECCGGGTS------------
T ss_pred             CCCEEEECCccC------CHHHHhhhheeeehhHHHHHHHHHHHHHHhcC--CCCCEEEEECchhhcc------------
Confidence            999999999963      45789999999999999999999999976421  1258999999988765            


Q ss_pred             CCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccC
Q 025509          159 DPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  211 (251)
Q Consensus       159 ~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  211 (251)
                         +.++...|++||+++++|+++++.++.+.|  |+|++|+||+++|++...
T Consensus       144 ---~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g--i~v~~v~Pg~v~t~~~~~  191 (254)
T 1sby_A          144 ---AIHQVPVYSASKAAVVSFTNSLAKLAPITG--VTAYSINPGITRTPLVHT  191 (254)
T ss_dssp             ---CCTTSHHHHHHHHHHHHHHHHHHHHHHHHS--EEEEEEEECSEESHHHHS
T ss_pred             ---CCCCchHHHHHHHHHHHHHHHHHHHhccCC--eEEEEEecCCccCccccc
Confidence               567788999999999999999999998888  999999999999998764

>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A*

Probab=100.00  E-value=5e-34  Score=239.85  Aligned_cols=187  Identities=23%  Similarity=0.317  Sum_probs=164.4

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      |++|||||++|||+++|++|+++|++|++++|+....++..+++..   ...+.++.+|++|+++++++++++.++++++
T Consensus        17 k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   93 (278)
T 2bgk_A           17 KVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGS---PDVISFVHCDVTKDEDVRNLVDTTIAKHGKL   93 (278)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCC---TTTEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCChhHHHHHHHHhCC---CCceEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence            5799999999999999999999999999999988776666555421   2378999999999999999999999989999


Q ss_pred             eEEEEcCCCCC----CCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCccccc
Q 025509           81 NILINNAGIMG----TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDK  156 (251)
Q Consensus        81 d~lv~~ag~~~----~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~  156 (251)
                      |+||||||...    ++.+.+.++|++.+++|+.+++.++++++|+|.++     +.++||++||..+..          
T Consensus        94 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-----~~~~iv~isS~~~~~----------  158 (278)
T 2bgk_A           94 DIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAARVMIPA-----KKGSIVFTASISSFT----------  158 (278)
T ss_dssp             CEEEECCCCCCSSCSSTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHGGG-----TCEEEEEECCGGGTC----------
T ss_pred             CEEEECCcccCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhc-----CCCeEEEEeeccccC----------
Confidence            99999999753    34567889999999999999999999999999875     468999999987765          


Q ss_pred             CCCCCCCC-cccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCC
Q 025509          157 INDPSGYN-GFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRHN  212 (251)
Q Consensus       157 ~~~~~~~~-~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~~  212 (251)
                           +.+ +...|+++|++++.|+++++.|+.+.|  |++++|+||++.|++....
T Consensus       159 -----~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g--i~v~~v~Pg~v~t~~~~~~  208 (278)
T 2bgk_A          159 -----AGEGVSHVYTATKHAVLGLTTSLCTELGEYG--IRVNCVSPYIVASPLLTDV  208 (278)
T ss_dssp             -----CCTTSCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEESCCSCCCCTTS
T ss_pred             -----CCCCCCcchHHHHHHHHHHHHHHHHHHhhcC--cEEEEEEeceecchhhhhh
Confidence                 444 667899999999999999999999988  9999999999999987653

>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A

Probab=100.00  E-value=1.2e-34  Score=242.62  Aligned_cols=175  Identities=24%  Similarity=0.284  Sum_probs=158.1

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      |++|||||++|||+++|++|+++|++|++++|+.+.             +.++.++++|++|.++++++++++.+++|++
T Consensus         9 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~-------------~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~i   75 (264)
T 2dtx_A            9 KVVIVTGASMGIGRAIAERFVDEGSKVIDLSIHDPG-------------EAKYDHIECDVTNPDQVKASIDHIFKEYGSI   75 (264)
T ss_dssp             CEEEEESCSSHHHHHHHHHHHHTTCEEEEEESSCCC-------------SCSSEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEecCccc-------------CCceEEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence            689999999999999999999999999999998654             3468889999999999999999999999999


Q ss_pred             eEEEEcCCCCC--CCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccccCC
Q 025509           81 NILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKIN  158 (251)
Q Consensus        81 d~lv~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~  158 (251)
                      |+||||||+..  ++.+.+.++|++.+++|+.+++.++++++|.|+++     +.++||++||.++..            
T Consensus        76 D~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-----~~g~iv~isS~~~~~------------  138 (264)
T 2dtx_A           76 SVLVNNAGIESYGKIESMSMGEWRRIIDVNLFGYYYASKFAIPYMIRS-----RDPSIVNISSVQASI------------  138 (264)
T ss_dssp             CEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTS-----SSCEEEEECCGGGTS------------
T ss_pred             CEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc-----CCcEEEEECCchhcc------------
Confidence            99999999753  35677899999999999999999999999999874     468999999988765            


Q ss_pred             CCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccC
Q 025509          159 DPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  211 (251)
Q Consensus       159 ~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  211 (251)
                         +.++...|++||+++++|+++++.|+++.   |+||+|+||+++|++...
T Consensus       139 ---~~~~~~~Y~~sK~a~~~~~~~la~e~~~~---i~vn~v~PG~v~t~~~~~  185 (264)
T 2dtx_A          139 ---ITKNASAYVTSKHAVIGLTKSIALDYAPL---LRCNAVCPATIDTPLVRK  185 (264)
T ss_dssp             ---CCTTBHHHHHHHHHHHHHHHHHHHHHTTT---SEEEEEEECSBCSHHHHH
T ss_pred             ---CCCCchhHHHHHHHHHHHHHHHHHHhcCC---cEEEEEEeCCCcCcchhh
Confidence               56778899999999999999999999875   899999999999998653

>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ...

Probab=100.00  E-value=3.3e-34  Score=242.44  Aligned_cols=186  Identities=24%  Similarity=0.266  Sum_probs=164.8

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      |++|||||++|||+++|++|+++|++|++++|+++++++..+++.+.. ...+.++.+|++|.++++++++++.+.+|++
T Consensus        29 k~vlITGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~Dl~d~~~v~~~~~~~~~~~g~i  107 (286)
T 1xu9_A           29 KKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELG-AASAHYIAGTMEDMTFAEQFVAQAGKLMGGL  107 (286)
T ss_dssp             CEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHT-CSEEEEEECCTTCHHHHHHHHHHHHHHHTSC
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhC-CCceEEEeCCCCCHHHHHHHHHHHHHHcCCC
Confidence            579999999999999999999999999999999988888877776542 3478999999999999999999998888999


Q ss_pred             eEEEEc-CCCCC-CCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccccCC
Q 025509           81 NILINN-AGIMG-TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKIN  158 (251)
Q Consensus        81 d~lv~~-ag~~~-~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~  158 (251)
                      |+|||| ||... +..+.+.+++++.+++|+.+++.++++++|.|.++      .|+||++||.++..            
T Consensus       108 D~li~naag~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~------~g~iv~isS~~~~~------------  169 (286)
T 1xu9_A          108 DMLILNHITNTSLNLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQS------NGSIVVVSSLAGKV------------  169 (286)
T ss_dssp             SEEEECCCCCCCCCCCCSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH------TCEEEEEEEGGGTS------------
T ss_pred             CEEEECCccCCCCccccCCHHHHHHHHHHHhhHHHHHHHHHHHHHHHC------CCEEEEECCccccc------------
Confidence            999999 57543 34456889999999999999999999999998764      58999999988765            


Q ss_pred             CCCCCCcccccchhHHHHHHHHHHHHHHh--ccCCCcEEEEEeeCCcccCCccc
Q 025509          159 DPSGYNGFRAYSQSKLANILHANELARRL--KEDGVDITANSVHPGAIATNIIR  210 (251)
Q Consensus       159 ~~~~~~~~~~Y~~sK~a~~~~~~~la~e~--~~~g~~i~v~~v~Pg~v~t~~~~  210 (251)
                         +.++...|++||+++++|+++++.|+  ...|  |++++|+||+++|++..
T Consensus       170 ---~~~~~~~Y~asK~a~~~~~~~l~~e~~~~~~~--i~v~~v~Pg~v~t~~~~  218 (286)
T 1xu9_A          170 ---AYPMVAAYSASKFALDGFFSSIRKEYSVSRVN--VSITLCVLGLIDTETAM  218 (286)
T ss_dssp             ---CCTTCHHHHHHHHHHHHHHHHHHHHHHHHTCC--CEEEEEEECCBCCHHHH
T ss_pred             ---CCCCccHHHHHHHHHHHHHHHHHHHHhhcCCC--eEEEEeecCccCChhHH
Confidence               66778899999999999999999999  4556  99999999999999864

>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A*

Probab=100.00  E-value=6.9e-34  Score=236.23  Aligned_cols=193  Identities=22%  Similarity=0.296  Sum_probs=167.1

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecC-chhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCC
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRD-IAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQ   79 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~-~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~   79 (251)
                      |++|||||++|||++++++|+++|++|++++|+ ++.+++..+++.+.  +.++.++.+|++++++++++++++.+++++
T Consensus         8 k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   85 (258)
T 3afn_B            8 KRVLITGSSQGIGLATARLFARAGAKVGLHGRKAPANIDETIASMRAD--GGDAAFFAADLATSEACQQLVDEFVAKFGG   85 (258)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCCTTHHHHHHHHHHT--TCEEEEEECCTTSHHHHHHHHHHHHHHHSS
T ss_pred             CEEEEeCCCChHHHHHHHHHHHCCCEEEEECCCchhhHHHHHHHHHhc--CCceEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            589999999999999999999999999999998 78888877777654  457999999999999999999999999999


Q ss_pred             eeEEEEcCCC-CC--CCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCccccc
Q 025509           80 LNILINNAGI-MG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDK  156 (251)
Q Consensus        80 id~lv~~ag~-~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~  156 (251)
                      +|+||||||. ..  +..+.+.++|+..+++|+.+++.++++++|.|.++.+..+..++||++||..+...         
T Consensus        86 id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~---------  156 (258)
T 3afn_B           86 IDVLINNAGGLVGRKPLPEIDDTFYDAVMDANIRSVVMTTKFALPHLAAAAKASGQTSAVISTGSIAGHTG---------  156 (258)
T ss_dssp             CSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHTSCEEEEEECCTHHHHC---------
T ss_pred             CCEEEECCCCcCCcCccccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcccCCCCCcEEEEecchhhccC---------
Confidence            9999999997 32  34567888999999999999999999999999875310112379999999876531         


Q ss_pred             CCCCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccC
Q 025509          157 INDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  211 (251)
Q Consensus       157 ~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  211 (251)
                           +.++...|+++|++++.|+++++.|+.+.|  |++++|+||++.|++...
T Consensus       157 -----~~~~~~~Y~~sK~a~~~~~~~~~~e~~~~g--i~v~~v~Pg~v~t~~~~~  204 (258)
T 3afn_B          157 -----GGPGAGLYGAAKAFLHNVHKNWVDFHTKDG--VRFNIVSPGTVDTAFHAD  204 (258)
T ss_dssp             -----CCTTCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECSBSSGGGTT
T ss_pred             -----CCCCchHHHHHHHHHHHHHHHHHHhhcccC--eEEEEEeCCCcccccccc
Confidence                 345677999999999999999999999988  999999999999998765

>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A*

Probab=100.00  E-value=1.2e-33  Score=240.38  Aligned_cols=186  Identities=22%  Similarity=0.196  Sum_probs=165.3

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      |++|||||++|||+++|++|+++|++|++++|+.+++++..+++.+.+ +.++.++.+|+++.++++++++++.+.++++
T Consensus        27 k~vlITGasggiG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~i  105 (302)
T 1w6u_A           27 KVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQT-GNKVHAIQCDVRDPDMVQNTVSELIKVAGHP  105 (302)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHH-SSCEEEEECCTTCHHHHHHHHHHHHHHTCSC
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhc-CCceEEEEeCCCCHHHHHHHHHHHHHHcCCC
Confidence            579999999999999999999999999999999988888877776543 3568999999999999999999999999999


Q ss_pred             eEEEEcCCCCC--CCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccccCC
Q 025509           81 NILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKIN  158 (251)
Q Consensus        81 d~lv~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~  158 (251)
                      |+||||||...  ++.+.+.++|+..+++|+.+++.++++++|++.++    ...++||++||..+..            
T Consensus       106 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~----~~~~~iv~isS~~~~~------------  169 (302)
T 1w6u_A          106 NIVINNAAGNFISPTERLSPNAWKTITDIVLNGTAFVTLEIGKQLIKA----QKGAAFLSITTIYAET------------  169 (302)
T ss_dssp             SEEEECCCCCCCSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHT----TCCEEEEEECCTHHHH------------
T ss_pred             CEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHh----cCCCEEEEEccccccc------------
Confidence            99999999753  34567889999999999999999999999999743    1468999999988776            


Q ss_pred             CCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCc
Q 025509          159 DPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNI  208 (251)
Q Consensus       159 ~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~  208 (251)
                         +.++...|++||++++.|+++++.++.+.|  |++++|+||++.|+.
T Consensus       170 ---~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g--i~v~~v~Pg~v~t~~  214 (302)
T 1w6u_A          170 ---GSGFVVPSASAKAGVEAMSKSLAAEWGKYG--MRFNVIQPGPIKTKG  214 (302)
T ss_dssp             ---CCTTCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECCBCC--
T ss_pred             ---CCCCcchhHHHHHHHHHHHHHHHHHhhhcC--cEEEEEeeccCCCcc
Confidence               566778999999999999999999999989  999999999999983

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}

Probab=100.00  E-value=1.5e-34  Score=267.13  Aligned_cols=183  Identities=25%  Similarity=0.288  Sum_probs=159.3

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCc---------hhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHH
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDI---------AAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFAS   71 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~---------~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~   71 (251)
                      |++|||||++|||+++|++|+++|++|++.+|+.         +.++++.+++.+.  +...   .+|++|.++++++++
T Consensus         9 kvalVTGas~GIG~a~A~~la~~Ga~Vv~~~~~~~~~~~gr~~~~~~~~~~~i~~~--g~~~---~~d~~d~~~~~~~v~   83 (604)
T 2et6_A            9 KVVIITGAGGGLGKYYSLEFAKLGAKVVVNDLGGALNGQGGNSKAADVVVDEIVKN--GGVA---VADYNNVLDGDKIVE   83 (604)
T ss_dssp             CEEEETTTTSHHHHHHHHHHHHTTCEEEEECC-----------CHHHHHHHHHHHT--TCEE---EEECCCTTCHHHHHH
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHcCCEEEEEeCCccccccccchHHHHHHHHHHHhc--CCeE---EEEcCCHHHHHHHHH
Confidence            6899999999999999999999999999998765         5667777777554  2332   358888888899999


Q ss_pred             HHHhcCCCeeEEEEcCCCCC--CCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCcccccccc
Q 025509           72 EYNIQHHQLNILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYH  149 (251)
Q Consensus        72 ~~~~~~g~id~lv~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~  149 (251)
                      ++.+++|++|+||||||+..  ++.+++.++|++++++|+.|++.++|+++|+|+++     +.|+||++||.++..   
T Consensus        84 ~~~~~~G~iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~a~~p~m~~~-----~~G~IVnisS~ag~~---  155 (604)
T 2et6_A           84 TAVKNFGTVHVIINNAGILRDASMKKMTEKDYKLVIDVHLNGAFAVTKAAWPYFQKQ-----KYGRIVNTSSPAGLY---  155 (604)
T ss_dssp             HHHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----TCEEEEEECCHHHHH---
T ss_pred             HHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-----CCCEEEEECCHHHcC---
Confidence            99999999999999999763  46788999999999999999999999999999886     469999999998877   


Q ss_pred             CCcccccCCCCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccC
Q 025509          150 EGIRFDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  211 (251)
Q Consensus       150 ~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  211 (251)
                                  +.++...|++||+|+.+|+++|+.|++++|  |+||+|+|| +.|+|...
T Consensus       156 ------------~~~~~~~Y~asKaal~~lt~~la~El~~~g--IrVn~v~Pg-~~T~m~~~  202 (604)
T 2et6_A          156 ------------GNFGQANYASAKSALLGFAETLAKEGAKYN--IKANAIAPL-ARSRMTES  202 (604)
T ss_dssp             ------------CCTTBHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEEC-CCCHHHHT
T ss_pred             ------------CCCCchHHHHHHHHHHHHHHHHHHHhCccC--eEEEEEccC-CcCccccc
Confidence                        677888999999999999999999999999  999999998 68887653

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}

Probab=100.00  E-value=2.2e-34  Score=265.98  Aligned_cols=182  Identities=25%  Similarity=0.290  Sum_probs=156.4

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      |++|||||++|||+++|++|+++|++|++.+|.  .++++.+++.+.  +..+..+.+|++  ++.+++++++.+++|++
T Consensus       323 kvalVTGas~GIG~a~A~~la~~Ga~Vv~~~~~--~~~~~~~~i~~~--g~~~~~~~~Dv~--~~~~~~~~~~~~~~G~i  396 (604)
T 2et6_A          323 KVVLITGAGAGLGKEYAKWFAKYGAKVVVNDFK--DATKTVDEIKAA--GGEAWPDQHDVA--KDSEAIIKNVIDKYGTI  396 (604)
T ss_dssp             CEEEESSCSSHHHHHHHHHHHHTTCEEEEECSS--CCHHHHHHHHHT--TCEEEEECCCHH--HHHHHHHHHHHHHHSCC
T ss_pred             CeEEEECcchHHHHHHHHHHHHCCCEEEEEeCc--cHHHHHHHHHhc--CCeEEEEEcChH--HHHHHHHHHHHHhcCCC
Confidence            689999999999999999999999999999873  245555666543  456777888884  45677888888889999


Q ss_pred             eEEEEcCCCCC--CCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccccCC
Q 025509           81 NILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKIN  158 (251)
Q Consensus        81 d~lv~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~  158 (251)
                      |+||||||+..  ++.+++.++|+.++++|+.|++.++++++|+|+++     +.|+||++||.++..            
T Consensus       397 DiLVnNAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~-----~~G~IVnisS~ag~~------------  459 (604)
T 2et6_A          397 DILVNNAGILRDRSFAKMSKQEWDSVQQVHLIGTFNLSRLAWPYFVEK-----QFGRIINITSTSGIY------------  459 (604)
T ss_dssp             CEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT-----TCEEEEEECCHHHHS------------
T ss_pred             CEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-----CCCEEEEECChhhcc------------
Confidence            99999999764  46788999999999999999999999999999875     469999999998876            


Q ss_pred             CCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccC
Q 025509          159 DPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  211 (251)
Q Consensus       159 ~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  211 (251)
                         +.+++..|++||+|+.+|+++|+.|++++|  |+||+|+||. .|+|...
T Consensus       460 ---~~~~~~~Y~asKaal~~lt~~la~El~~~g--IrVn~v~PG~-~T~m~~~  506 (604)
T 2et6_A          460 ---GNFGQANYSSSKAGILGLSKTMAIEGAKNN--IKVNIVAPHA-ETAMTLS  506 (604)
T ss_dssp             ---CCTTBHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECC-CCCC---
T ss_pred             ---CCCCChhHHHHHHHHHHHHHHHHHHhCccC--eEEEEEcCCC-CCccccc
Confidence               667888999999999999999999999999  9999999995 9998653

>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=100.00  E-value=1e-33  Score=233.85  Aligned_cols=196  Identities=27%  Similarity=0.320  Sum_probs=157.7

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcC--CEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCC
Q 025509            1 MDIVITGATSGIGTETARVLALRG--VHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHH   78 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G--~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g   78 (251)
                      |++|||||++|||++++++|+++|  ++|++++|+..+++++.+    . .+.++.++.+|+++.++++++++++.++++
T Consensus         4 k~vlItGasggiG~~la~~l~~~g~~~~V~~~~r~~~~~~~l~~----~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   78 (250)
T 1yo6_A            4 GSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKS----I-KDSRVHVLPLTVTCDKSLDTFVSKVGEIVG   78 (250)
T ss_dssp             SEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCHHHHT----C-CCTTEEEEECCTTCHHHHHHHHHHHHHHHG
T ss_pred             CEEEEecCCchHHHHHHHHHHhcCCCcEEEEEecCHHHHHHHHh----c-cCCceEEEEeecCCHHHHHHHHHHHHHhcC
Confidence            579999999999999999999999  999999999877655422    1 256799999999999999999999988888


Q ss_pred             --CeeEEEEcCCCCC---CCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHh------hccCCCCceEEEEcCcccccc
Q 025509           79 --QLNILINNAGIMG---TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKT------ARKSGGEGRIINVSSEGHRLA  147 (251)
Q Consensus        79 --~id~lv~~ag~~~---~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~------~~~~~~~g~iv~vsS~~~~~~  147 (251)
                        ++|+||||||...   +..+.+.++|++.+++|+.+++.++++++|.|.++      ++.....++||++||..+...
T Consensus        79 ~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~  158 (250)
T 1yo6_A           79 SDGLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVLLTQKLLPLLKNAASKESGDQLSVSRAAVITISSGLGSIT  158 (250)
T ss_dssp             GGCCCEEEECCCCCCCBCTTSCCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHHHSSCSSCCCTTTCEEEEECCGGGCST
T ss_pred             CCCCcEEEECCcccCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcccccCCCcccCCCcEEEEeccCccccC
Confidence              8999999999754   34567889999999999999999999999999875      211111689999999877652


Q ss_pred             ccCCcccccCCCCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccC
Q 025509          148 YHEGIRFDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  211 (251)
Q Consensus       148 ~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  211 (251)
                      ....        ..+.++...|++||++++.|+++++.|+.+.|  |++++|+||+++|++...
T Consensus       159 ~~~~--------~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g--i~v~~v~Pg~v~t~~~~~  212 (250)
T 1yo6_A          159 DNTS--------GSAQFPVLAYRMSKAAINMFGRTLAVDLKDDN--VLVVNFCPGWVQTNLGGK  212 (250)
T ss_dssp             TCCS--------TTSSSCBHHHHHHHHHHHHHHHHHHHHTGGGT--CEEEEEECCCC-------
T ss_pred             Cccc--------ccccCCccHHHHHHHHHHHHHHHHHHHhccCC--eEEEEEcCCceecCCCCC
Confidence            1100        01114677899999999999999999999888  999999999999999764

>1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A*

Probab=100.00  E-value=7e-34  Score=244.10  Aligned_cols=183  Identities=26%  Similarity=0.340  Sum_probs=160.3

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEE---------ecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHH
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMG---------VRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFAS   71 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~---------~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~   71 (251)
                      |++|||||++|||+++|++|+++|++|+++         +|+..++++..+++.+.  +..   ..+|+++.++++++++
T Consensus        10 k~~lVTGas~GIG~~~a~~La~~Ga~Vv~~~~~~~~~~~~R~~~~~~~~~~~l~~~--~~~---~~~D~~~~~~~~~~~~   84 (319)
T 1gz6_A           10 RVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRR--GGK---AVANYDSVEAGEKLVK   84 (319)
T ss_dssp             CEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSCBCCSHHHHHHHHHHHHT--TCE---EEEECCCGGGHHHHHH
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCcccccccCCHHHHHHHHHHHHhh--CCe---EEEeCCCHHHHHHHHH
Confidence            689999999999999999999999999996         45677777777777654  222   3589999999999999


Q ss_pred             HHHhcCCCeeEEEEcCCCCCC--CCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCcccccccc
Q 025509           72 EYNIQHHQLNILINNAGIMGT--PFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYH  149 (251)
Q Consensus        72 ~~~~~~g~id~lv~~ag~~~~--~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~  149 (251)
                      ++.++++++|+||||||+...  +.+.+.++|+..+++|+.|++.++++++|+|+++     +.++||++||.++..   
T Consensus        85 ~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~-----~~grIV~vsS~~~~~---  156 (319)
T 1gz6_A           85 TALDTFGRIDVVVNNAGILRDRSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQ-----NYGRIIMTASASGIY---  156 (319)
T ss_dssp             HHHHHTSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----TCEEEEEECCHHHHH---
T ss_pred             HHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-----CCCEEEEECChhhcc---
Confidence            999999999999999997643  4567889999999999999999999999999886     468999999988776   


Q ss_pred             CCcccccCCCCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccC
Q 025509          150 EGIRFDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  211 (251)
Q Consensus       150 ~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  211 (251)
                                  +.+++..|++||+|+.+|+++|++|+.+.|  |+||+|+||++ |++...
T Consensus       157 ------------~~~~~~~Y~aSK~a~~~~~~~la~el~~~g--I~vn~v~PG~~-t~~~~~  203 (319)
T 1gz6_A          157 ------------GNFGQANYSAAKLGLLGLANTLVIEGRKNN--IHCNTIAPNAG-SRMTET  203 (319)
T ss_dssp             ------------CCTTCHHHHHHHHHHHHHHHHHHHHTGGGT--EEEEEEEEECC-STTTGG
T ss_pred             ------------CCCCCHHHHHHHHHHHHHHHHHHHHhcccC--EEEEEEeCCCc-cccccc
Confidence                        556778999999999999999999999989  99999999998 877553

>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2

Probab=100.00  E-value=6.1e-33  Score=236.26  Aligned_cols=185  Identities=21%  Similarity=0.284  Sum_probs=164.2

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhC---CCCceEEEEecCCCHHHHHHHHHHHHhcC
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEI---PSAKVDAMELDLSSLASVRNFASEYNIQH   77 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~---~~~~v~~~~~D~~~~~~i~~~~~~~~~~~   77 (251)
                      |++|||||++|||+++|++|+++|++|++++|+.+++++..+++.+..   .+.++.++.+|+++.++++++++++.+.+
T Consensus        19 k~vlVTGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~   98 (303)
T 1yxm_A           19 QVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLVKSTLDTF   98 (303)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhccccCCccEEEEecCCCCHHHHHHHHHHHHHHc
Confidence            589999999999999999999999999999999888888888776532   24579999999999999999999999999


Q ss_pred             CCeeEEEEcCCCCC--CCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccc
Q 025509           78 HQLNILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFD  155 (251)
Q Consensus        78 g~id~lv~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~  155 (251)
                      +++|+||||||...  +..+.+.++|++.+++|+.+++.++++++|.+.++     ..++||++||.+ ..         
T Consensus        99 g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-----~~~~iv~isS~~-~~---------  163 (303)
T 1yxm_A           99 GKINFLVNNGGGQFLSPAEHISSKGWHAVLETNLTGTFYMCKAVYSSWMKE-----HGGSIVNIIVPT-KA---------  163 (303)
T ss_dssp             SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHH-----HCEEEEEECCCC-TT---------
T ss_pred             CCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHh-----cCCeEEEEEeec-cc---------
Confidence            99999999999653  34567889999999999999999999999975543     368999999976 33         


Q ss_pred             cCCCCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCc
Q 025509          156 KINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNI  208 (251)
Q Consensus       156 ~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~  208 (251)
                            +.+....|+++|+++.+|+++++.|+.+.|  |++++|+||++.|++
T Consensus       164 ------~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g--i~v~~v~Pg~v~t~~  208 (303)
T 1yxm_A          164 ------GFPLAVHSGAARAGVYNLTKSLALEWACSG--IRINCVAPGVIYSQT  208 (303)
T ss_dssp             ------CCTTCHHHHHHHHHHHHHHHHHHHHTGGGT--EEEEEEEECSBCCTG
T ss_pred             ------CCCcchhhHHHHHHHHHHHHHHHHHhcccC--eEEEEEecCCcccch
Confidence                  566778999999999999999999999888  999999999999995

>3lt0_A Enoyl-ACP reductase; triclosan, triclosan variant, oxidoredu P.falciparum; HET: NAD FT1; 1.96A {Plasmodium falciparum} SCOP: c.2.1.2 PDB: 1v35_A* 3lsy_A* 1uh5_A* 3lt1_A* 3lt2_A* 3lt4_A* 3am4_A* 3am3_A* 3am5_A* 2o2y_A* 2oos_A* 2ol4_A* 2op0_A* 2op1_A* 1vrw_A* 1zsn_A* 1zw1_A* 1zxb_A* 1zxl_A* 2foi_A* ...

Probab=100.00  E-value=7.7e-36  Score=257.40  Aligned_cols=188  Identities=18%  Similarity=0.223  Sum_probs=157.2

Q ss_pred             CEEEEECCCC--hhHHHHHHHHHHcCCEEEEEecCchh---------HHHHHHHHHh-hCCCCceEEEEecCCCH--H--
Q 025509            1 MDIVITGATS--GIGTETARVLALRGVHVVMGVRDIAA---------GKDVKETIVK-EIPSAKVDAMELDLSSL--A--   64 (251)
Q Consensus         1 k~vlItG~s~--gIG~a~a~~l~~~G~~Vi~~~r~~~~---------~~~~~~~~~~-~~~~~~v~~~~~D~~~~--~--   64 (251)
                      |++|||||++  |||+++|++|+++|++|++++|++..         ++...+.... ......+.++++|+++.  +  
T Consensus         3 k~~lITGas~~~GIG~aiA~~la~~G~~Vv~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~   82 (329)
T 3lt0_A            3 DICFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWPPVYNIFMKNYKNGKFDNDMIIDKDKKMNILDMLPFDASFDTANDI   82 (329)
T ss_dssp             CEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEECHHHHHHHHHHHHTTTTTGGGBCSSSCBCCEEEEEECCTTCSSGGGC
T ss_pred             cEEEEECCCCCCchHHHHHHHHHHCCCEEEEEecCccccccccchHHHHHHHHHHHhhcccccccccccccccccchhhh
Confidence            6899999986  99999999999999999988876421         1111111111 00123478889999988  7  


Q ss_pred             ----------------HHHHHHHHHHhcCCCeeEEEEcCCCC----CCCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHH
Q 025509           65 ----------------SVRNFASEYNIQHHQLNILINNAGIM----GTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMK  124 (251)
Q Consensus        65 ----------------~i~~~~~~~~~~~g~id~lv~~ag~~----~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~  124 (251)
                                      +++++++++.+++|++|+||||||+.    .++.+.+.++|++++++|+.+++.++++++|+|+
T Consensus        83 ~~~~~~~~~~Dlsd~~~v~~~~~~~~~~~g~iDilVnnAGi~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~  162 (329)
T 3lt0_A           83 DEETKNNKRYNMLQNYTIEDVANLIHQKYGKINMLVHSLANAKEVQKDLLNTSRKGYLDALSKSSYSLISLCKYFVNIMK  162 (329)
T ss_dssp             CHHHHTSHHHHTCCSCSHHHHHHHHHHHHCCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEE
T ss_pred             hhhhcccccccccCHHHHHHHHHHHHHhcCCCcEEEECCcccccCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHh
Confidence                            99999999999999999999999973    3466789999999999999999999999999997


Q ss_pred             HhhccCCCCceEEEEcCccccccccCCcccccCCCCCCCCccc-ccchhHHHHHHHHHHHHHHhcc-CCCcEEEEEeeCC
Q 025509          125 KTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFR-AYSQSKLANILHANELARRLKE-DGVDITANSVHPG  202 (251)
Q Consensus       125 ~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~-~Y~~sK~a~~~~~~~la~e~~~-~g~~i~v~~v~Pg  202 (251)
                      +       .|+||++||.++..               +.+.+. .|++||+|+.+|+++|+.|+++ +|  |+||+|+||
T Consensus       163 ~-------~g~Iv~isS~~~~~---------------~~~~~~~~Y~asKaal~~~~~~la~el~~~~g--I~vn~v~PG  218 (329)
T 3lt0_A          163 P-------QSSIISLTYHASQK---------------VVPGYGGGMSSAKAALESDTRVLAYHLGRNYN--IRINTISAG  218 (329)
T ss_dssp             E-------EEEEEEEECGGGTS---------------CCTTCTTTHHHHHHHHHHHHHHHHHHHHHHHC--CEEEEEEEC
T ss_pred             h-------CCeEEEEeCccccC---------------CCCcchHHHHHHHHHHHHHHHHHHHHhCCccC--eEEEEEecc
Confidence            5       28999999988876               667775 9999999999999999999998 88  999999999


Q ss_pred             cccCCcccCC
Q 025509          203 AIATNIIRHN  212 (251)
Q Consensus       203 ~v~t~~~~~~  212 (251)
                      +|+|+|.+..
T Consensus       219 ~v~T~~~~~~  228 (329)
T 3lt0_A          219 PLKSRAATAI  228 (329)
T ss_dssp             CCCCHHHHTC
T ss_pred             eeechhHhhh
Confidence            9999998764

>3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis}

Probab=100.00  E-value=1.6e-33  Score=237.11  Aligned_cols=186  Identities=21%  Similarity=0.238  Sum_probs=163.2

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      |++|||||++|||+++|++|+++|++|++++|+....++..+.+.+.  +.++.++.+|+++.++++++++++.+.++++
T Consensus        35 k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~i  112 (279)
T 3ctm_A           35 KVASVTGSSGGIGWAVAEAYAQAGADVAIWYNSHPADEKAEHLQKTY--GVHSKAYKCNISDPKSVEETISQQEKDFGTI  112 (279)
T ss_dssp             CEEEETTTTSSHHHHHHHHHHHHTCEEEEEESSSCCHHHHHHHHHHH--CSCEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCcceEEEeecCCHHHHHHHHHHHHHHhCCC
Confidence            58999999999999999999999999999999988777776666543  4578999999999999999999998888999


Q ss_pred             eEEEEcCCCCC---CCC-cCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCccccc
Q 025509           81 NILINNAGIMG---TPF-MLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDK  156 (251)
Q Consensus        81 d~lv~~ag~~~---~~~-~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~  156 (251)
                      |+||||||...   +.. +.+.++|++.+++|+.+++.+++.++|.++++     +.++||++||..+..          
T Consensus       113 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~-----~~~~iv~isS~~~~~----------  177 (279)
T 3ctm_A          113 DVFVANAGVTWTQGPEIDVDNYDSWNKIISVDLNGVYYCSHNIGKIFKKN-----GKGSLIITSSISGKI----------  177 (279)
T ss_dssp             SEEEECGGGSTTC--CCCSSHHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----TCCEEEEECCCTTSC----------
T ss_pred             CEEEECCcccccCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-----CCCeEEEECchHhcc----------
Confidence            99999999753   233 66788999999999999999999999999876     468999999987654          


Q ss_pred             CCCCCC--CCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccC
Q 025509          157 INDPSG--YNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  211 (251)
Q Consensus       157 ~~~~~~--~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  211 (251)
                           +  .++...|+++|++++.|+++++.|+.+.|   +||+|+||++.|++...
T Consensus       178 -----~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~---~v~~v~Pg~v~t~~~~~  226 (279)
T 3ctm_A          178 -----VNIPQLQAPYNTAKAACTHLAKSLAIEWAPFA---RVNTISPGYIDTDITDF  226 (279)
T ss_dssp             -----C---CCHHHHHHHHHHHHHHHHHHHHHTTTTC---EEEEEEECSBSSTTTSS
T ss_pred             -----CCCCCCcccHHHHHHHHHHHHHHHHHHhcccC---CEEEEeccCCccccccc
Confidence                 3  56678999999999999999999998876   88999999999999753

>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A*

Probab=100.00  E-value=8.8e-35  Score=240.10  Aligned_cols=174  Identities=15%  Similarity=0.126  Sum_probs=155.0

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcC--C
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQH--H   78 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~--g   78 (251)
                      |++|||||++|||+++|++|+++|++|++++|+++..+            ....++.+|++++++++++++++.+++  +
T Consensus         8 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~------------~~~~~~~~D~~~~~~v~~~~~~~~~~~~~g   75 (241)
T 1dhr_A            8 RRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENEEA------------SASVIVKMTDSFTEQADQVTAEVGKLLGDQ   75 (241)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSCCTTS------------SEEEECCCCSCHHHHHHHHHHHHHHHHTTC
T ss_pred             CEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCChhhcc------------CCcEEEEcCCCCHHHHHHHHHHHHHHhCCC
Confidence            58999999999999999999999999999999875421            245778899999999999999998888  7


Q ss_pred             CeeEEEEcCCCCCC--C-CcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccc
Q 025509           79 QLNILINNAGIMGT--P-FMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFD  155 (251)
Q Consensus        79 ~id~lv~~ag~~~~--~-~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~  155 (251)
                      ++|+||||||+...  + .+.+.++|++.+++|+.+++.++++++|+|++       .|+||++||.++..         
T Consensus        76 ~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~-------~g~iv~isS~~~~~---------  139 (241)
T 1dhr_A           76 KVDAILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKE-------GGLLTLAGAKAALD---------  139 (241)
T ss_dssp             CEEEEEECCCCCCCBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEE-------EEEEEEECCGGGGS---------
T ss_pred             CCCEEEEcccccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHhhcc-------CCEEEEECCHHHcc---------
Confidence            99999999997542  3 56678899999999999999999999999854       37999999988776         


Q ss_pred             cCCCCCCCCcccccchhHHHHHHHHHHHHHHhc--cCCCcEEEEEeeCCcccCCccc
Q 025509          156 KINDPSGYNGFRAYSQSKLANILHANELARRLK--EDGVDITANSVHPGAIATNIIR  210 (251)
Q Consensus       156 ~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~--~~g~~i~v~~v~Pg~v~t~~~~  210 (251)
                            +.++...|++||+|+++|+++++.|++  +.|  |+||+|+||+++|++..
T Consensus       140 ------~~~~~~~Y~asK~a~~~~~~~la~e~~~~~~g--i~v~~v~PG~v~T~~~~  188 (241)
T 1dhr_A          140 ------GTPGMIGYGMAKGAVHQLCQSLAGKNSGMPSG--AAAIAVLPVTLDTPMNR  188 (241)
T ss_dssp             ------CCTTBHHHHHHHHHHHHHHHHHTSTTSSCCTT--CEEEEEEESCEECHHHH
T ss_pred             ------CCCCchHHHHHHHHHHHHHHHHHHHhccCCCC--eEEEEEecCcccCcccc
Confidence                  667788999999999999999999998  888  99999999999999865

>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A*

Probab=100.00  E-value=4.2e-33  Score=230.00  Aligned_cols=179  Identities=22%  Similarity=0.301  Sum_probs=155.2

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      |++|||||++|||++++++|+++|++|++++|+++++++..+++    +  .+.++.+|+++.++++++++    +++++
T Consensus         8 k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~----~--~~~~~~~D~~~~~~~~~~~~----~~~~i   77 (244)
T 3d3w_A            8 RRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVREC----P--GIEPVCVDLGDWEATERALG----SVGPV   77 (244)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHS----T--TCEEEECCTTCHHHHHHHHT----TCCCC
T ss_pred             cEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc----C--CCCEEEEeCCCHHHHHHHHH----HcCCC
Confidence            57999999999999999999999999999999987766554432    2  35677999999999988776    56789


Q ss_pred             eEEEEcCCCCC--CCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccccCC
Q 025509           81 NILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKIN  158 (251)
Q Consensus        81 d~lv~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~  158 (251)
                      |+||||||...  +..+.+.++|++.+++|+.+++.+++++.|.|.+++    ..++||++||..+..            
T Consensus        78 d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~----~~~~iv~~sS~~~~~------------  141 (244)
T 3d3w_A           78 DLLVNNAAVALLQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARG----VPGAIVNVSSQCSQR------------  141 (244)
T ss_dssp             CEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT----CCEEEEEECCGGGTS------------
T ss_pred             CEEEECCccCCCcchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC----CCcEEEEeCchhhcc------------
Confidence            99999999753  345678899999999999999999999999998751    158999999987765            


Q ss_pred             CCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCccc
Q 025509          159 DPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIR  210 (251)
Q Consensus       159 ~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~  210 (251)
                         +.++...|++||++++.|+++++.|+++.|  |++++|+||++.|++..
T Consensus       142 ---~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~--i~v~~v~Pg~v~t~~~~  188 (244)
T 3d3w_A          142 ---AVTNHSVYCSTKGALDMLTKVMALELGPHK--IRVNAVNPTVVMTSMGQ  188 (244)
T ss_dssp             ---CCTTBHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECCBTTTTHH
T ss_pred             ---CCCCCchHHHHHHHHHHHHHHHHHHhcccC--eEEEEEEeccccccchh
Confidence               566778999999999999999999999888  99999999999999865

>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum}

Probab=100.00  E-value=5.2e-34  Score=236.94  Aligned_cols=173  Identities=13%  Similarity=0.146  Sum_probs=154.7

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      |++|||||++|||+++|++|+++|++|++++|+..+.              .-..+.+|++|.++++++++++.++++++
T Consensus        23 k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~--------------~~~~~~~d~~d~~~v~~~~~~~~~~~g~i   88 (251)
T 3orf_A           23 KNILVLGGSGALGAEVVKFFKSKSWNTISIDFRENPN--------------ADHSFTIKDSGEEEIKSVIEKINSKSIKV   88 (251)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCTT--------------SSEEEECSCSSHHHHHHHHHHHHTTTCCE
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCcccc--------------cccceEEEeCCHHHHHHHHHHHHHHcCCC
Confidence            6899999999999999999999999999999987542              12457899999999999999999999999


Q ss_pred             eEEEEcCCCCCC---CCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccccC
Q 025509           81 NILINNAGIMGT---PFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKI  157 (251)
Q Consensus        81 d~lv~~ag~~~~---~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~  157 (251)
                      |+||||||+...   ..+.+.++|++.+++|+.+++.++++++|+|++       .|+||++||..+..           
T Consensus        89 D~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~-------~g~iv~isS~~~~~-----------  150 (251)
T 3orf_A           89 DTFVCAAGGWSGGNASSDEFLKSVKGMIDMNLYSAFASAHIGAKLLNQ-------GGLFVLTGASAALN-----------  150 (251)
T ss_dssp             EEEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEE-------EEEEEEECCGGGGS-----------
T ss_pred             CEEEECCccCCCCCcccccCHHHHHHHHHHHhHHHHHHHHHHHHhhcc-------CCEEEEEechhhcc-----------
Confidence            999999997642   456678999999999999999999999999854       47999999988876           


Q ss_pred             CCCCCCCcccccchhHHHHHHHHHHHHHHhc--cCCCcEEEEEeeCCcccCCcccC
Q 025509          158 NDPSGYNGFRAYSQSKLANILHANELARRLK--EDGVDITANSVHPGAIATNIIRH  211 (251)
Q Consensus       158 ~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~--~~g~~i~v~~v~Pg~v~t~~~~~  211 (251)
                          +.++...|++||+|+++|+++++.|++  +.|  |+||+|+||+++|++...
T Consensus       151 ----~~~~~~~Y~~sKaa~~~~~~~la~e~~~~~~g--i~v~~v~PG~v~t~~~~~  200 (251)
T 3orf_A          151 ----RTSGMIAYGATKAATHHIIKDLASENGGLPAG--STSLGILPVTLDTPTNRK  200 (251)
T ss_dssp             ----CCTTBHHHHHHHHHHHHHHHHHTSTTSSSCTT--CEEEEEEESCBCCHHHHH
T ss_pred             ----CCCCCchhHHHHHHHHHHHHHHHHHhcccCCC--cEEEEEecCcCcCcchhh
Confidence                677888999999999999999999987  778  999999999999998653

>3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum}

Probab=100.00  E-value=1.7e-34  Score=238.94  Aligned_cols=180  Identities=21%  Similarity=0.194  Sum_probs=137.4

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      |++|||||++|||+++|++|++ |++|++++|+.+.+++..+       ...+.++.+|+++.++ .+.+.+..+.++++
T Consensus         6 k~vlITGas~gIG~~~a~~l~~-g~~v~~~~r~~~~~~~~~~-------~~~~~~~~~D~~~~~~-~~~~~~~~~~~~~i   76 (245)
T 3e9n_A            6 KIAVVTGATGGMGIEIVKDLSR-DHIVYALGRNPEHLAALAE-------IEGVEPIESDIVKEVL-EEGGVDKLKNLDHV   76 (245)
T ss_dssp             CEEEEESTTSHHHHHHHHHHTT-TSEEEEEESCHHHHHHHHT-------STTEEEEECCHHHHHH-TSSSCGGGTTCSCC
T ss_pred             CEEEEEcCCCHHHHHHHHHHhC-CCeEEEEeCCHHHHHHHHh-------hcCCcceecccchHHH-HHHHHHHHHhcCCC
Confidence            6899999999999999999998 8999999999877665443       2358899999998776 44455555678899


Q ss_pred             eEEEEcCCCCC--CCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccccCC
Q 025509           81 NILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKIN  158 (251)
Q Consensus        81 d~lv~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~  158 (251)
                      |+||||||+..  ++.+.+.++|++.+++|+.+++.++++++|.|+++      .|+||++||..+..            
T Consensus        77 d~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~------~g~iv~isS~~~~~------------  138 (245)
T 3e9n_A           77 DTLVHAAAVARDTTIEAGSVAEWHAHLDLNVIVPAELSRQLLPALRAA------SGCVIYINSGAGNG------------  138 (245)
T ss_dssp             SEEEECC----------CHHHHHHHHHHHHTHHHHHHHHHHHHHHHHH------TCEEEEEC------------------
T ss_pred             CEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhc------CCeEEEEcCccccc------------
Confidence            99999999764  35567889999999999999999999999999875      48999999988776            


Q ss_pred             CCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCC
Q 025509          159 DPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRHN  212 (251)
Q Consensus       159 ~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~~  212 (251)
                         +.++...|++||+|+++|+++++.|+++.|  |+||+|+||++.|++.+..
T Consensus       139 ---~~~~~~~Y~asK~a~~~~~~~la~e~~~~g--i~v~~v~PG~v~t~~~~~~  187 (245)
T 3e9n_A          139 ---PHPGNTIYAASKHALRGLADAFRKEEANNG--IRVSTVSPGPTNTPMLQGL  187 (245)
T ss_dssp             -------CHHHHHHHHHHHHHHHHHHHHHGGGT--CEEEEEEECCC--------
T ss_pred             ---CCCCchHHHHHHHHHHHHHHHHHHHhhhcC--eEEEEEecCCccCchhhhh
Confidence               677888999999999999999999999999  9999999999999997754

>3uce_A Dehydrogenase; rossmann fold, oxidoreductase; HET: NDP; 1.80A {Vibrio vulnificus}

Probab=100.00  E-value=1.3e-33  Score=230.47  Aligned_cols=161  Identities=25%  Similarity=0.253  Sum_probs=145.5

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      |++|||||++|||+++|++|+++|++|++++|+.+                      +|++|+++++++++++    +++
T Consensus         7 k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~----------------------~D~~~~~~v~~~~~~~----g~i   60 (223)
T 3uce_A            7 TVYVVLGGTSGIGAELAKQLESEHTIVHVASRQTG----------------------LDISDEKSVYHYFETI----GAF   60 (223)
T ss_dssp             EEEEEETTTSHHHHHHHHHHCSTTEEEEEESGGGT----------------------CCTTCHHHHHHHHHHH----CSE
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCEEEEecCCcc----------------------cCCCCHHHHHHHHHHh----CCC
Confidence            57999999999999999999999999999999753                      7999999999998865    799


Q ss_pred             eEEEEcCCCC---CCCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccccC
Q 025509           81 NILINNAGIM---GTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKI  157 (251)
Q Consensus        81 d~lv~~ag~~---~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~  157 (251)
                      |+||||||..   .++.+.+.++|++.+++|+.+++.++++++|+|++       .|+||++||..+..           
T Consensus        61 d~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~-------~g~iv~~sS~~~~~-----------  122 (223)
T 3uce_A           61 DHLIVTAGSYAPAGKVVDVEVTQAKYAFDTKFWGAVLAAKHGARYLKQ-------GGSITLTSGMLSRK-----------  122 (223)
T ss_dssp             EEEEECCCCCCCCSCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGEEE-------EEEEEEECCGGGTS-----------
T ss_pred             CEEEECCCCCCCCCCcccCCHHHHHhhheeeeeeHHHHHHHHHhhccC-------CeEEEEecchhhcc-----------
Confidence            9999999975   23667889999999999999999999999999854       47999999988776           


Q ss_pred             CCCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCCc
Q 025509          158 NDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRHNS  213 (251)
Q Consensus       158 ~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~~~  213 (251)
                          +.++...|+++|+|+++|+++++.|+++    |+||+|+||+++|++.....
T Consensus       123 ----~~~~~~~Y~asK~a~~~~~~~la~e~~~----i~vn~v~PG~v~t~~~~~~~  170 (223)
T 3uce_A          123 ----VVANTYVKAAINAAIEATTKVLAKELAP----IRVNAISPGLTKTEAYKGMN  170 (223)
T ss_dssp             ----CCTTCHHHHHHHHHHHHHHHHHHHHHTT----SEEEEEEECSBCSGGGTTSC
T ss_pred             ----CCCCchHHHHHHHHHHHHHHHHHHhhcC----cEEEEEEeCCCcchhhhhcc
Confidence                6778889999999999999999999986    89999999999999987643

>1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=100.00  E-value=2.3e-34  Score=236.87  Aligned_cols=174  Identities=12%  Similarity=0.066  Sum_probs=154.6

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcC--C
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQH--H   78 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~--g   78 (251)
                      |++|||||++|||+++|++|+++|++|++++|+++..+            ....++.+|+++.++++++++++.+.+  +
T Consensus         4 k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~------------~~~~~~~~D~~~~~~~~~~~~~~~~~~~~g   71 (236)
T 1ooe_A            4 GKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQA------------DSNILVDGNKNWTEQEQSILEQTASSLQGS   71 (236)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCCTTS------------SEEEECCTTSCHHHHHHHHHHHHHHHHTTC
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCEEEEEecCccccc------------cccEEEeCCCCCHHHHHHHHHHHHHHhCCC
Confidence            57999999999999999999999999999999875421            245678899999999999999998888  7


Q ss_pred             CeeEEEEcCCCCC--CC-CcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccc
Q 025509           79 QLNILINNAGIMG--TP-FMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFD  155 (251)
Q Consensus        79 ~id~lv~~ag~~~--~~-~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~  155 (251)
                      ++|+||||||+..  ++ .+.+.++|++.+++|+.+++.++++++|+|++       .++||++||..+..         
T Consensus        72 ~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~-------~g~iv~isS~~~~~---------  135 (236)
T 1ooe_A           72 QVDGVFCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKP-------GGLLQLTGAAAAMG---------  135 (236)
T ss_dssp             CEEEEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEE-------EEEEEEECCGGGGS---------
T ss_pred             CCCEEEECCcccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhcc-------CCEEEEECchhhcc---------
Confidence            9999999999754  23 56678899999999999999999999999854       37999999988776         


Q ss_pred             cCCCCCCCCcccccchhHHHHHHHHHHHHHHhc--cCCCcEEEEEeeCCcccCCccc
Q 025509          156 KINDPSGYNGFRAYSQSKLANILHANELARRLK--EDGVDITANSVHPGAIATNIIR  210 (251)
Q Consensus       156 ~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~--~~g~~i~v~~v~Pg~v~t~~~~  210 (251)
                            +.++...|++||+++++|+++++.|++  +.|  |+||+|+||+++|++..
T Consensus       136 ------~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~g--i~v~~v~Pg~v~t~~~~  184 (236)
T 1ooe_A          136 ------PTPSMIGYGMAKAAVHHLTSSLAAKDSGLPDN--SAVLTIMPVTLDTPMNR  184 (236)
T ss_dssp             ------CCTTBHHHHHHHHHHHHHHHHHHSTTSSCCTT--CEEEEEEESCBCCHHHH
T ss_pred             ------CCCCcHHHHHHHHHHHHHHHHHHHHhcccCCC--eEEEEEecCcccCcchh
Confidence                  667888999999999999999999998  888  99999999999999865

>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2

Probab=100.00  E-value=4.9e-33  Score=232.55  Aligned_cols=194  Identities=26%  Similarity=0.334  Sum_probs=163.0

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcC---CEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcC
Q 025509            1 MDIVITGATSGIGTETARVLALRG---VHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQH   77 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G---~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~   77 (251)
                      |++|||||++|||+++|++|+++|   ++|++++|+....+.+ +++.+.  +.++.++.+|+++.++++++++++.+.+
T Consensus        22 k~vlITGasggIG~~la~~L~~~G~~~~~V~~~~r~~~~~~~~-~~l~~~--~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   98 (267)
T 1sny_A           22 NSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKEL-EDLAKN--HSNIHILEIDLRNFDAYDKLVADIEGVT   98 (267)
T ss_dssp             SEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCHHH-HHHHHH--CTTEEEEECCTTCGGGHHHHHHHHHHHH
T ss_pred             CEEEEECCCCcHHHHHHHHHHhcCCCCcEEEEEecChhhhHHH-HHhhcc--CCceEEEEecCCChHHHHHHHHHHHHhc
Confidence            579999999999999999999999   9999999998766544 334433  4579999999999999999999998888


Q ss_pred             C--CeeEEEEcCCCCC---CCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhcc------CCCCceEEEEcCccccc
Q 025509           78 H--QLNILINNAGIMG---TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARK------SGGEGRIINVSSEGHRL  146 (251)
Q Consensus        78 g--~id~lv~~ag~~~---~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~------~~~~g~iv~vsS~~~~~  146 (251)
                      +  ++|+||||||...   ++.+.+.++++..+++|+.+++.++++++|.|.++...      ....++||++||..+..
T Consensus        99 g~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~  178 (267)
T 1sny_A           99 KDQGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPIMLAKACLPLLKKAAKANESQPMGVGRAAIINMSSILGSI  178 (267)
T ss_dssp             GGGCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHTTTSCSSTTTCEEEEECCGGGCS
T ss_pred             CCCCccEEEECCCcCCCccccccCCHHHHHHHHhhhchHHHHHHHHHHHHHhhcccccccccccCCCceEEEEecccccc
Confidence            8  7999999999754   34567889999999999999999999999999875211      01158999999987765


Q ss_pred             cccCCcccccCCCCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccC
Q 025509          147 AYHEGIRFDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  211 (251)
Q Consensus       147 ~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  211 (251)
                      ..            .+.++...|+++|++++.|+++++.|+.+.|  |++++|+||+++|++...
T Consensus       179 ~~------------~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g--i~v~~v~Pg~v~t~~~~~  229 (267)
T 1sny_A          179 QG------------NTDGGMYAYRTSKSALNAATKSLSVDLYPQR--IMCVSLHPGWVKTDMGGS  229 (267)
T ss_dssp             TT------------CCSCCCHHHHHHHHHHHHHHHHHHHHHGGGT--CEEEEECCCSBCSTTTCT
T ss_pred             cC------------CCCCCchHHHHHHHHHHHHHHHHHHHhhcCC--cEEEEeCCcceecCCCCC
Confidence            20            0123567899999999999999999999988  999999999999999754

>3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3v1t_C 3v1u_A* 4fw8_A* 3q6i_A* 3m1l_A

Probab=100.00  E-value=1.3e-33  Score=252.90  Aligned_cols=185  Identities=32%  Similarity=0.354  Sum_probs=157.4

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCC-
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQ-   79 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~-   79 (251)
                      |++|||||++|||+++|++|+++|++|++++|+.. .++..+...+.    .+.++.+|++|.++++++++++.+++++ 
T Consensus       214 k~~LVTGgsgGIG~aiA~~La~~Ga~Vvl~~r~~~-~~~l~~~~~~~----~~~~~~~Dvtd~~~v~~~~~~~~~~~g~~  288 (454)
T 3u0b_A          214 KVAVVTGAARGIGATIAEVFARDGATVVAIDVDGA-AEDLKRVADKV----GGTALTLDVTADDAVDKITAHVTEHHGGK  288 (454)
T ss_dssp             CEEEESSCSSHHHHHHHHHHHHTTCEEEEEECGGG-HHHHHHHHHHH----TCEEEECCTTSTTHHHHHHHHHHHHSTTC
T ss_pred             CEEEEeCCchHHHHHHHHHHHHCCCEEEEEeCCcc-HHHHHHHHHHc----CCeEEEEecCCHHHHHHHHHHHHHHcCCC
Confidence            58999999999999999999999999999999643 22332222221    3578999999999999999999999876 


Q ss_pred             eeEEEEcCCCCCC--CCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccccC
Q 025509           80 LNILINNAGIMGT--PFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKI  157 (251)
Q Consensus        80 id~lv~~ag~~~~--~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~  157 (251)
                      +|+||||||+...  +.+++.++|+.++++|+.+++++.+++.|.|.++     +.++||++||.++..           
T Consensus       289 id~lV~nAGv~~~~~~~~~~~~~~~~~~~~nv~g~~~l~~~~~~~~~~~-----~~g~iV~iSS~a~~~-----------  352 (454)
T 3u0b_A          289 VDILVNNAGITRDKLLANMDEKRWDAVIAVNLLAPQRLTEGLVGNGTIG-----EGGRVIGLSSMAGIA-----------  352 (454)
T ss_dssp             CSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHTTSSC-----TTCEEEEECCHHHHH-----------
T ss_pred             ceEEEECCcccCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhc-----CCCEEEEEeChHhCC-----------
Confidence            9999999998643  5678999999999999999999999999998764     468999999999887           


Q ss_pred             CCCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCC
Q 025509          158 NDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRHN  212 (251)
Q Consensus       158 ~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~~  212 (251)
                          +.+++..|+++|+++++|+++++.|+.++|  |+||+|+||+++|+|....
T Consensus       353 ----g~~g~~~YaasKaal~~l~~~la~e~~~~g--I~vn~v~PG~v~T~~~~~~  401 (454)
T 3u0b_A          353 ----GNRGQTNYATTKAGMIGLAEALAPVLADKG--ITINAVAPGFIETKMTEAI  401 (454)
T ss_dssp             ----CCTTCHHHHHHHHHHHHHHHHHHHHHHTTT--CEEEEEEECSBCC------
T ss_pred             ----CCCCCHHHHHHHHHHHHHHHHHHHHhhhcC--cEEEEEEcCcccChhhhhc
Confidence                677889999999999999999999999999  9999999999999998754

>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2

Probab=100.00  E-value=1e-32  Score=227.65  Aligned_cols=179  Identities=23%  Similarity=0.341  Sum_probs=155.1

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      |++|||||++|||++++++|+++|++|++++|+.+.+++..++    .  ..+.++.+|+++.++++++++    .++++
T Consensus         8 ~~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~----~--~~~~~~~~D~~~~~~~~~~~~----~~~~i   77 (244)
T 1cyd_A            8 LRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKE----C--PGIEPVCVDLGDWDATEKALG----GIGPV   77 (244)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH----S--TTCEEEECCTTCHHHHHHHHT----TCCCC
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHh----c--cCCCcEEecCCCHHHHHHHHH----HcCCC
Confidence            5899999999999999999999999999999998766554432    2  245677999999999988776    56789


Q ss_pred             eEEEEcCCCCC--CCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccccCC
Q 025509           81 NILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKIN  158 (251)
Q Consensus        81 d~lv~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~  158 (251)
                      |+||||||...  +..+.+.++|++.+++|+.+++.++++++|.|.+++    ..++||++||..+..            
T Consensus        78 d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~----~~~~iv~~sS~~~~~------------  141 (244)
T 1cyd_A           78 DLLVNNAALVIMQPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINRG----VPGSIVNVSSMVAHV------------  141 (244)
T ss_dssp             SEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT----CCEEEEEECCGGGTS------------
T ss_pred             CEEEECCcccCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCC----CCeEEEEEcchhhcC------------
Confidence            99999999754  345678899999999999999999999999998761    158999999987765            


Q ss_pred             CCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCccc
Q 025509          159 DPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIR  210 (251)
Q Consensus       159 ~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~  210 (251)
                         +.++...|+++|++++.|+++++.|+.+.|  |++++|+||++.|++..
T Consensus       142 ---~~~~~~~Y~~sK~a~~~~~~~~a~~~~~~g--i~v~~v~pg~v~t~~~~  188 (244)
T 1cyd_A          142 ---TFPNLITYSSTKGAMTMLTKAMAMELGPHK--IRVNSVNPTVVLTDMGK  188 (244)
T ss_dssp             ---CCTTBHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECCBTTHHHH
T ss_pred             ---CCCCcchhHHHHHHHHHHHHHHHHHhhhcC--eEEEEEecCcccCcccc
Confidence               566778999999999999999999999888  99999999999999865

>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2

Probab=100.00  E-value=3.3e-33  Score=234.21  Aligned_cols=184  Identities=25%  Similarity=0.322  Sum_probs=163.5

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEec-CchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCC
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVR-DIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQ   79 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r-~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~   79 (251)
                      |++|||||++|||++++++|+++|++|++++| +.+.+++..+++.+.  +.++.++.+|++|.++++++++++.+++++
T Consensus        22 k~vlItGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   99 (274)
T 1ja9_A           22 KVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKL--GAQGVAIQADISKPSEVVALFDKAVSHFGG   99 (274)
T ss_dssp             CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT--TCCEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHhc--CCcEEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence            57999999999999999999999999999999 777777777766553  457889999999999999999999999999


Q ss_pred             eeEEEEcCCCCC--CCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCcccc-ccccCCccccc
Q 025509           80 LNILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHR-LAYHEGIRFDK  156 (251)
Q Consensus        80 id~lv~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~-~~~~~~~~~~~  156 (251)
                      +|+||||||...  +..+.+.++|++.+++|+.+++.+++++++.+++       +++||++||.++. .          
T Consensus       100 ~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-------~~~iv~~sS~~~~~~----------  162 (274)
T 1ja9_A          100 LDFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRR-------GGRIILTSSIAAVMT----------  162 (274)
T ss_dssp             EEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEEE-------EEEEEEECCGGGTCC----------
T ss_pred             CCEEEECCCCCCCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhh-------CCEEEEEcChHhccC----------
Confidence            999999999753  3456788999999999999999999999999862       3799999998776 3          


Q ss_pred             CCCCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCccc
Q 025509          157 INDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIR  210 (251)
Q Consensus       157 ~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~  210 (251)
                           +.++...|+++|++++.|+++++.|+.+.|  |+++.|+||++.|++..
T Consensus       163 -----~~~~~~~Y~~sK~a~~~~~~~~~~e~~~~g--i~v~~v~Pg~v~t~~~~  209 (274)
T 1ja9_A          163 -----GIPNHALYAGSKAAVEGFCRAFAVDCGAKG--VTVNCIAPGGVKTDMFD  209 (274)
T ss_dssp             -----SCCSCHHHHHHHHHHHHHHHHHHHHHGGGT--CEEEEEEECCBSSHHHH
T ss_pred             -----CCCCCchHHHHHHHHHHHHHHHHHHhhhcC--eEEEEEeeCcccccchh
Confidence                 456778999999999999999999999888  99999999999999865

>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*

Probab=100.00  E-value=5.7e-33  Score=232.46  Aligned_cols=199  Identities=27%  Similarity=0.343  Sum_probs=162.1

Q ss_pred             CEEEEECCCChhHHHHHHHHHH-cCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCC
Q 025509            1 MDIVITGATSGIGTETARVLAL-RGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQ   79 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~-~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~   79 (251)
                      |++|||||++|||+++|++|++ .|++|++++|+..+.++..+++.+.  +.++.++.+|+++.++++++++++.+++++
T Consensus         5 k~vlITGasggIG~~~a~~L~~~~g~~V~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~   82 (276)
T 1wma_A            5 HVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAE--GLSPRFHQLDIDDLQSIRALRDFLRKEYGG   82 (276)
T ss_dssp             CEEEESSCSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHHHT--TCCCEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHhcCCeEEEEeCChHHHHHHHHHHHhc--CCeeEEEECCCCCHHHHHHHHHHHHHhcCC
Confidence            6899999999999999999999 9999999999988888887777654  457889999999999999999999998999


Q ss_pred             eeEEEEcCCCCCC-CCcCC-chhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCC------
Q 025509           80 LNILINNAGIMGT-PFMLS-KDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEG------  151 (251)
Q Consensus        80 id~lv~~ag~~~~-~~~~~-~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~------  151 (251)
                      +|+||||||.... ..+.+ .++++..+++|+.+++.++++++|.|++       .++||++||..+..+....      
T Consensus        83 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~-------~g~iv~~sS~~~~~~~~~~~~~~~~  155 (276)
T 1wma_A           83 LDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKP-------QGRVVNVSSIMSVRALKSCSPELQQ  155 (276)
T ss_dssp             EEEEEECCCCCCCTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEE-------EEEEEEECCHHHHHHHHTSCHHHHH
T ss_pred             CCEEEECCcccccCCCccccHHHHHhhhheeeeeHHHHHHHHHHhhCC-------CCEEEEECChhhhcccccCChhHHh
Confidence            9999999997643 23334 4789999999999999999999998754       3799999998776421100      


Q ss_pred             ----cccc-----------------cCCCCCCCCcccccchhHHHHHHHHHHHHHHhcc----CCCcEEEEEeeCCcccC
Q 025509          152 ----IRFD-----------------KINDPSGYNGFRAYSQSKLANILHANELARRLKE----DGVDITANSVHPGAIAT  206 (251)
Q Consensus       152 ----~~~~-----------------~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~----~g~~i~v~~v~Pg~v~t  206 (251)
                          ..+.                 ......+++. ..|++||++++.|+++++.++.+    .|  |+|++|+||++.|
T Consensus       156 ~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~-~~Y~~sK~a~~~~~~~la~~~~~~~~~~~--i~v~~v~PG~v~t  232 (276)
T 1wma_A          156 KFRSETITEEELVGLMNKFVEDTKKGVHQKEGWPS-SAYGVTKIGVTVLSRIHARKLSEQRKGDK--ILLNACCPGWVRT  232 (276)
T ss_dssp             HHHCSSCCHHHHHHHHHHHHHHHHTTCTTTTTCCS-CHHHHHHHHHHHHHHHHHHHHHHHCTTSC--CEEEEEECCSBCS
T ss_pred             hccccccchhhhhhhhhhhhhhhcccccccCCCcc-chhHHHHHHHHHHHHHHHHHhhcccCCCc--eEEEEecCCcccc
Confidence                0000                 0000112233 78999999999999999999987    67  9999999999999


Q ss_pred             CcccC
Q 025509          207 NIIRH  211 (251)
Q Consensus       207 ~~~~~  211 (251)
                      ++...
T Consensus       233 ~~~~~  237 (276)
T 1wma_A          233 DMAGP  237 (276)
T ss_dssp             TTTCT
T ss_pred             CcCCc
Confidence            99764

>4eue_A Putative reductase CA_C0462; TER, biofuel, synthetic biology, catalytic mechan substrate specificity, oxidoreductase; HET: NAI; 2.00A {Clostridium acetobutylicum} PDB: 4euf_A* 4euh_A*

Probab=100.00  E-value=7.8e-33  Score=243.96  Aligned_cols=190  Identities=16%  Similarity=0.033  Sum_probs=157.9

Q ss_pred             CEEEEECCCChhHHH--HHHHHHHcCCEEEEEecCchh------------HHHHHHHHHhhCCCCceEEEEecCCCHHHH
Q 025509            1 MDIVITGATSGIGTE--TARVLALRGVHVVMGVRDIAA------------GKDVKETIVKEIPSAKVDAMELDLSSLASV   66 (251)
Q Consensus         1 k~vlItG~s~gIG~a--~a~~l~~~G~~Vi~~~r~~~~------------~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i   66 (251)
                      |++|||||++|||++  +++.|+++|++|++++|+...            .+.+.+.+.+ . +..+.++++|+++.+++
T Consensus        61 K~aLVTGassGIG~A~aia~ala~~Ga~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~-~-g~~~~~~~~Dvtd~~~v  138 (418)
T 4eue_A           61 KKVLIVGASSGFGLATRISVAFGGPEAHTIGVSYETGATDRRIGTAGWYNNIFFKEFAKK-K-GLVAKNFIEDAFSNETK  138 (418)
T ss_dssp             SEEEEESCSSHHHHHHHHHHHHSSSCCEEEEEECCCCCCSSCCCCHHHHHHHHHHHHHHH-T-TCCEEEEESCTTCHHHH
T ss_pred             CEEEEECCCcHHHHHHHHHHHHHhCCCEEEEEecCcchhhhcccccccchHHHHHHHHHH-c-CCcEEEEEeeCCCHHHH
Confidence            689999999999999  999999999999999997543            2233333333 2 56789999999999999


Q ss_pred             HHHHHHHHhcCCCeeEEEEcCCCC---------------CCC---------------------CcCCchhhHHHHHHHHH
Q 025509           67 RNFASEYNIQHHQLNILINNAGIM---------------GTP---------------------FMLSKDNIELQFATNHL  110 (251)
Q Consensus        67 ~~~~~~~~~~~g~id~lv~~ag~~---------------~~~---------------------~~~~~~~~~~~~~~n~~  110 (251)
                      +++++++.+++|++|+||||||..               .+.                     .+.+.++|+..+++|..
T Consensus       139 ~~~v~~i~~~~G~IDiLVnNAG~~~r~~~~~g~~~~s~~~p~~~~~~~~~~d~~~~~~~~~~~~~~t~e~~~~~~~vn~~  218 (418)
T 4eue_A          139 DKVIKYIKDEFGKIDLFVYSLAAPRRKDYKTGNVYTSRIKTILGDFEGPTIDVERDEITLKKVSSASIEEIEETRKVMGG  218 (418)
T ss_dssp             HHHHHHHHHTTCCEEEEEECCCCSEEECTTTCCEEECCCCBSSSCEEEEEEETTTTEEEEEEECBCCHHHHHHHHHHHSS
T ss_pred             HHHHHHHHHHcCCCCEEEECCcccccccccccccccccccccccccccccccccccccccccccCCCHHHHHHHHHHhhH
Confidence            999999999999999999999974               122                     24588999999999999


Q ss_pred             HHH-HHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccccCCCCCCCCcc--cccchhHHHHHHHHHHHHHHh
Q 025509          111 GHF-LLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGF--RAYSQSKLANILHANELARRL  187 (251)
Q Consensus       111 ~~~-~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~--~~Y~~sK~a~~~~~~~la~e~  187 (251)
                      +.+ .+++++.+.+...     ++|+||++||.++..               +.+.+  +.|++||+|+.+|+++|+.|+
T Consensus       219 ~~~~~~~~~l~~~~~~~-----~gg~IV~iSSi~~~~---------------~~p~~~~~aY~ASKaAL~~ltrsLA~EL  278 (418)
T 4eue_A          219 EDWQEWCEELLYEDCFS-----DKATTIAYSYIGSPR---------------TYKIYREGTIGIAKKDLEDKAKLINEKL  278 (418)
T ss_dssp             HHHHHHHHHHHHTTCEE-----EEEEEEEEECCCCGG---------------GTTTTTTSHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhhhc-----CCcEEEEEeCchhcC---------------CCCccccHHHHHHHHHHHHHHHHHHHHh
Confidence            887 6777766553332     368999999988776               56666  899999999999999999999


Q ss_pred             cc-CCCcEEEEEeeCCcccCCcccCCcc
Q 025509          188 KE-DGVDITANSVHPGAIATNIIRHNSL  214 (251)
Q Consensus       188 ~~-~g~~i~v~~v~Pg~v~t~~~~~~~~  214 (251)
                      ++ .|  |+||+|+||.|.|++....+.
T Consensus       279 a~~~G--IrVN~V~PG~v~T~~s~~ip~  304 (418)
T 4eue_A          279 NRVIG--GRAFVSVNKALVTKASAYIPT  304 (418)
T ss_dssp             HHHHS--CEEEEEECCCCCCHHHHTSTT
T ss_pred             CCccC--eEEEEEECCcCcChhhhcCCC
Confidence            99 89  999999999999999876543

>1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2

Probab=100.00  E-value=1.5e-32  Score=227.91  Aligned_cols=171  Identities=22%  Similarity=0.261  Sum_probs=147.6

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      |++|||||++|||+++|++|+++|++|++++|+++..+    ++     + .+.++ +|+  .++++++++++.    ++
T Consensus        20 k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~----~~-----~-~~~~~-~D~--~~~~~~~~~~~~----~i   82 (249)
T 1o5i_A           20 KGVLVLAASRGIGRAVADVLSQEGAEVTICARNEELLK----RS-----G-HRYVV-CDL--RKDLDLLFEKVK----EV   82 (249)
T ss_dssp             CEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHH----HT-----C-SEEEE-CCT--TTCHHHHHHHSC----CC
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHH----hh-----C-CeEEE-eeH--HHHHHHHHHHhc----CC
Confidence            68999999999999999999999999999999863221    11     2 46677 999  556777777653    79


Q ss_pred             eEEEEcCCCCC--CCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccccCC
Q 025509           81 NILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKIN  158 (251)
Q Consensus        81 d~lv~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~  158 (251)
                      |+||||||...  ++.+.+.++|++.+++|+.+++.++++++|.|+++     +.++||++||..+..            
T Consensus        83 D~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~-----~~g~iv~isS~~~~~------------  145 (249)
T 1o5i_A           83 DILVLNAGGPKAGFFDELTNEDFKEAIDSLFLNMIKIVRNYLPAMKEK-----GWGRIVAITSFSVIS------------  145 (249)
T ss_dssp             SEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----TCEEEEEECCGGGTS------------
T ss_pred             CEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-----CCcEEEEEcchHhcC------------
Confidence            99999999754  35677889999999999999999999999999886     468999999988765            


Q ss_pred             CCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCccc
Q 025509          159 DPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIR  210 (251)
Q Consensus       159 ~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~  210 (251)
                         +.++...|+++|+++++|+++++.|+.+.|  |+||+|+||+++|++..
T Consensus       146 ---~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g--i~v~~v~Pg~v~t~~~~  192 (249)
T 1o5i_A          146 ---PIENLYTSNSARMALTGFLKTLSFEVAPYG--ITVNCVAPGWTETERVK  192 (249)
T ss_dssp             ---CCTTBHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECSBCCTTHH
T ss_pred             ---CCCCCchHHHHHHHHHHHHHHHHHHhhhcC--eEEEEEeeCCCccCccc
Confidence               567788999999999999999999999999  99999999999999865

>3oml_A GH14720P, peroxisomal multifunctional enzyme type 2, CG3415; rossmann fold, hot-DOG fold, hydratase 2 motif, peroxisomes, oxidoreductase; 2.15A {Drosophila melanogaster}

Probab=100.00  E-value=8.5e-33  Score=256.11  Aligned_cols=183  Identities=28%  Similarity=0.294  Sum_probs=145.3

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEec---------CchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHH
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVR---------DIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFAS   71 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r---------~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~   71 (251)
                      |++|||||++|||+++|++|+++|++|++++|         +...+++..+++.+..  ..   ..+|+++.++++++++
T Consensus        20 k~~lVTGas~GIG~aiA~~La~~Ga~Vv~~~r~~~~~~~~~~~~~~~~~~~~i~~~~--~~---~~~D~~d~~~~~~~~~   94 (613)
T 3oml_A           20 RVAVVTGAGAGLGREYALLFAERGAKVVVNDLGGTHSGDGASQRAADIVVDEIRKAG--GE---AVADYNSVIDGAKVIE   94 (613)
T ss_dssp             CEEEETTTTSHHHHHHHHHHHHTTCEEEEC--------------CHHHHHHHHHHTT--CC---EEECCCCGGGHHHHHC
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcccccccCCHHHHHHHHHHHHHhC--Ce---EEEEeCCHHHHHHHHH
Confidence            68999999999999999999999999999988         6677777777776542  22   2479999999999999


Q ss_pred             HHHhcCCCeeEEEEcCCCCC--CCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCcccccccc
Q 025509           72 EYNIQHHQLNILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYH  149 (251)
Q Consensus        72 ~~~~~~g~id~lv~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~  149 (251)
                      ++.+++|++|+||||||+..  ++.+.+.++|+.++++|+.|++.++++++|+|+++     +.|+||++||.++..   
T Consensus        95 ~~~~~~g~iDiLVnnAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~l~~~~~p~m~~~-----~~g~IV~isS~a~~~---  166 (613)
T 3oml_A           95 TAIKAFGRVDILVNNAGILRDRSLVKTSEQDWNLVNDVHLKGSFKCTQAAFPYMKKQ-----NYGRIIMTSSNSGIY---  166 (613)
T ss_dssp             ----------CEECCCCCCCCCCSTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-----TCEEEEEECCHHHHH---
T ss_pred             HHHHHCCCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-----CCCEEEEECCHHHcC---
Confidence            99999999999999999864  35678999999999999999999999999999885     468999999998887   


Q ss_pred             CCcccccCCCCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccC
Q 025509          150 EGIRFDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  211 (251)
Q Consensus       150 ~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  211 (251)
                                  +.++...|++||+|+.+|+++|+.|+++.|  |+||+|+||.+ |+|...
T Consensus       167 ------------~~~~~~~Y~asKaal~~lt~~la~e~~~~g--I~vn~v~Pg~~-t~~~~~  213 (613)
T 3oml_A          167 ------------GNFGQVNYTAAKMGLIGLANTVAIEGARNN--VLCNVIVPTAA-SRMTEG  213 (613)
T ss_dssp             ------------CCTTCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEEC-------CC
T ss_pred             ------------CCCCChHHHHHHHHHHHHHHHHHHHhCccC--eEEEEEECCCC-Chhhhh
Confidence                        677888999999999999999999999999  99999999975 666554

>2o2s_A Enoyl-acyl carrier reductase; enoyl reductase, triclosan, rossmann fold, oxidoreductase; HET: NAD TCL; 2.60A {Toxoplasma gondii} PDB: 2o50_A 3nj8_A*

Probab=100.00  E-value=6.4e-33  Score=237.73  Aligned_cols=187  Identities=16%  Similarity=0.148  Sum_probs=148.4

Q ss_pred             CEEEEECC--CChhHHHHHHHHHHcCCEEEEEecCchh------HH-HHHHHHHhhCCCC---ceEEEEecC--------
Q 025509            1 MDIVITGA--TSGIGTETARVLALRGVHVVMGVRDIAA------GK-DVKETIVKEIPSA---KVDAMELDL--------   60 (251)
Q Consensus         1 k~vlItG~--s~gIG~a~a~~l~~~G~~Vi~~~r~~~~------~~-~~~~~~~~~~~~~---~v~~~~~D~--------   60 (251)
                      |++|||||  ++|||+++|++|+++|++|++++|++..      .. +..+++.+...+.   .+.++.+|+        
T Consensus        10 k~~lVTGa~~s~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~   89 (315)
T 2o2s_A           10 QTAFVAGVADSHGYGWAIAKHLASAGARVALGTWPPVLGLFQKSLQSGRLDEDRKLPDGSLIEFAGVYPLDAAFDKPEDV   89 (315)
T ss_dssp             CEEEEECCSSSSSHHHHHHHHHHTTTCEEEEEECHHHHHHHHHHHHHTTTHHHHBCTTSCBCCCSCEEECCTTCSSTTSS
T ss_pred             CEEEEeCCCCCCChHHHHHHHHHHCCCEEEEEecccccchhhhhhhhhhhhhhhhhhccccccccccccccccccccchh
Confidence            58999999  8999999999999999999999986411      00 0011121111111   134444443        


Q ss_pred             ----C--------CHHHHHHHHHHHHhcCCCeeEEEEcCCCC----CCCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHH
Q 025509           61 ----S--------SLASVRNFASEYNIQHHQLNILINNAGIM----GTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMK  124 (251)
Q Consensus        61 ----~--------~~~~i~~~~~~~~~~~g~id~lv~~ag~~----~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~  124 (251)
                          +        |.++++++++++.+++|++|+||||||+.    .++.+.+.++|++.+++|+.+++.++++++|+|+
T Consensus        90 ~~Dv~~~~~~~~~d~~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~  169 (315)
T 2o2s_A           90 PQDIKDNKRYAGVDGYTIKEVAVKVKQDLGNIDILVHSLANGPEVTKPLLETSRKGYLAASSNSAYSFVSLLQHFGPIMN  169 (315)
T ss_dssp             CHHHHTCGGGSSCCCCSHHHHHHHHHHHHCSEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHSTTEE
T ss_pred             hhhhhcccccccCCHHHHHHHHHHHHHhcCCCCEEEECCccCCcCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHh
Confidence                3        25689999999998999999999999964    3456788999999999999999999999999985


Q ss_pred             HhhccCCCCceEEEEcCccccccccCCcccccCCCCCCCCcc-cccchhHHHHHHHHHHHHHHhcc-CCCcEEEEEeeCC
Q 025509          125 KTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGF-RAYSQSKLANILHANELARRLKE-DGVDITANSVHPG  202 (251)
Q Consensus       125 ~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~-~~Y~~sK~a~~~~~~~la~e~~~-~g~~i~v~~v~Pg  202 (251)
                      +       .|+||++||.++..               +.+++ ..|++||+|+++|+++|+.|+++ +|  |+||+|+||
T Consensus       170 ~-------~g~Iv~isS~~~~~---------------~~~~~~~~Y~asKaal~~l~~~la~el~~~~g--Irvn~v~PG  225 (315)
T 2o2s_A          170 E-------GGSAVTLSYLAAER---------------VVPGYGGGMSSAKAALESDTRTLAWEAGQKYG--VRVNAISAG  225 (315)
T ss_dssp             E-------EEEEEEEEEGGGTS---------------CCTTCCTTHHHHHHHHHHHHHHHHHHHHHHTC--CEEEEEEEC
T ss_pred             c-------CCEEEEEecccccc---------------cCCCccHHHHHHHHHHHHHHHHHHHHhCcccC--eEEEEEecc
Confidence            4       37999999988765               55565 58999999999999999999985 88  999999999


Q ss_pred             cccCCcccC
Q 025509          203 AIATNIIRH  211 (251)
Q Consensus       203 ~v~t~~~~~  211 (251)
                      +|+|++...
T Consensus       226 ~v~T~~~~~  234 (315)
T 2o2s_A          226 PLKSRAASA  234 (315)
T ss_dssp             CCCCHHHHH
T ss_pred             cccchhhhh
Confidence            999998653

>1d7o_A Enoyl-[acyl-carrier protein] reductase (NADH) PRE; triclosan, enoyl reductase, oxidoreductase; HET: NAD TCL; 1.90A {Brassica napus} SCOP: c.2.1.2 PDB: 1eno_A* 1enp_A* 1cwu_A*

Probab=100.00  E-value=6.5e-33  Score=235.69  Aligned_cols=187  Identities=18%  Similarity=0.192  Sum_probs=148.3

Q ss_pred             CEEEEECCC--ChhHHHHHHHHHHcCCEEEEEecCchhHH-------HHHHHHHhhCCC----CceEEEEec--------
Q 025509            1 MDIVITGAT--SGIGTETARVLALRGVHVVMGVRDIAAGK-------DVKETIVKEIPS----AKVDAMELD--------   59 (251)
Q Consensus         1 k~vlItG~s--~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~-------~~~~~~~~~~~~----~~v~~~~~D--------   59 (251)
                      |++|||||+  +|||+++|++|+++|++|++++|++....       +..+++ +....    .....+.+|        
T Consensus         9 k~~lVTGas~~~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~d   87 (297)
T 1d7o_A            9 KRAFIAGIADDNGYGWAVAKSLAAAGAEILVGTWVPALNIFETSLRRGKFDQS-RVLPDGSLMEIKKVYPLDAVFDNPED   87 (297)
T ss_dssp             CEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEEEHHHHHHHHHHHHTTTTTGG-GBCTTSSBCCEEEEEEECTTCCSGGG
T ss_pred             CEEEEECCCCCCChHHHHHHHHHHCCCeEEEeeccccchhhhhhhhhhHhhhh-hhhccccccccccccccceeccchhh
Confidence            689999999  99999999999999999999998632110       000011 11111    112344443        


Q ss_pred             CC------------CHHHHHHHHHHHHhcCCCeeEEEEcCCCC----CCCCcCCchhhHHHHHHHHHHHHHHHHHHHHHH
Q 025509           60 LS------------SLASVRNFASEYNIQHHQLNILINNAGIM----GTPFMLSKDNIELQFATNHLGHFLLTNLLLDTM  123 (251)
Q Consensus        60 ~~------------~~~~i~~~~~~~~~~~g~id~lv~~ag~~----~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~  123 (251)
                      ++            ++++++++++++.+++|++|+||||||+.    .++.+.+.++|++.+++|+.+++.++++++|+|
T Consensus        88 v~~Dv~~~~~~~~~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m  167 (297)
T 1d7o_A           88 VPEDVKANKRYAGSSNWTVQEAAECVRQDFGSIDILVHSLANGPEVSKPLLETSRKGYLAAISASSYSFVSLLSHFLPIM  167 (297)
T ss_dssp             SCHHHHTSHHHHHCCCCSHHHHHHHHHHHHSCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGE
T ss_pred             hhhhhhccccccccCHHHHHHHHHHHHHHcCCCCEEEECCccCccCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHh
Confidence            32            25688999999988899999999999964    345678899999999999999999999999998


Q ss_pred             HHhhccCCCCceEEEEcCccccccccCCcccccCCCCCCCCcc-cccchhHHHHHHHHHHHHHHhcc-CCCcEEEEEeeC
Q 025509          124 KKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGF-RAYSQSKLANILHANELARRLKE-DGVDITANSVHP  201 (251)
Q Consensus       124 ~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~-~~Y~~sK~a~~~~~~~la~e~~~-~g~~i~v~~v~P  201 (251)
                      ++       .|+||++||.++..               +.+++ ..|++||+|+++|+++++.|+++ .|  |+||+|+|
T Consensus       168 ~~-------~g~iv~isS~~~~~---------------~~~~~~~~Y~asKaa~~~~~~~la~e~~~~~g--i~vn~v~P  223 (297)
T 1d7o_A          168 NP-------GGASISLTYIASER---------------IIPGYGGGMSSAKAALESDTRVLAFEAGRKQN--IRVNTISA  223 (297)
T ss_dssp             EE-------EEEEEEEECGGGTS---------------CCTTCTTTHHHHHHHHHHHHHHHHHHHHHHHC--CEEEEEEE
T ss_pred             cc-------CceEEEEecccccc---------------CCCCcchHHHHHHHHHHHHHHHHHHHhCcccC--cEEEEEec
Confidence            54       37999999988765               55666 68999999999999999999985 78  99999999


Q ss_pred             CcccCCcccCC
Q 025509          202 GAIATNIIRHN  212 (251)
Q Consensus       202 g~v~t~~~~~~  212 (251)
                      |+++|++....
T Consensus       224 G~v~T~~~~~~  234 (297)
T 1d7o_A          224 GPLGSRAAKAI  234 (297)
T ss_dssp             CCCBCCCSSCC
T ss_pred             cccccchhhhc
Confidence            99999997653

>1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=100.00  E-value=8.1e-32  Score=221.67  Aligned_cols=180  Identities=25%  Similarity=0.277  Sum_probs=153.6

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      |++|||||++|||++++++|+++|++|++++|+.. .             ..+.++.+|++++++++++++++ ++++++
T Consensus         3 k~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~-~-------------~~~~~~~~D~~~~~~~~~~~~~~-~~~~~~   67 (242)
T 1uay_A            3 RSALVTGGASGLGRAAALALKARGYRVVVLDLRRE-G-------------EDLIYVEGDVTREEDVRRAVARA-QEEAPL   67 (242)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCC-S-------------SSSEEEECCTTCHHHHHHHHHHH-HHHSCE
T ss_pred             CEEEEeCCCChHHHHHHHHHHHCCCEEEEEccCcc-c-------------cceEEEeCCCCCHHHHHHHHHHH-HhhCCc
Confidence            68999999999999999999999999999999864 1             23588999999999999999999 778899


Q ss_pred             eEEEEcCCCCCC--CCcCCc----hhhHHHHHHHHHHHHHHHHHHHHHHHHhhcc-CCCCceEEEEcCccccccccCCcc
Q 025509           81 NILINNAGIMGT--PFMLSK----DNIELQFATNHLGHFLLTNLLLDTMKKTARK-SGGEGRIINVSSEGHRLAYHEGIR  153 (251)
Q Consensus        81 d~lv~~ag~~~~--~~~~~~----~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~-~~~~g~iv~vsS~~~~~~~~~~~~  153 (251)
                      |++|||||....  ..+.+.    ++|++.+++|+.+++.+++++.|.|.+++.. .+..++||++||..+..       
T Consensus        68 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~-------  140 (242)
T 1uay_A           68 FAVVSAAGVGLAEKILGKEGPHGLESFRRVLEVNLLGTFNVLRLAAWAMRENPPDAEGQRGVIVNTASVAAFE-------  140 (242)
T ss_dssp             EEEEECCCCCCCCCSBCSSSBCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCCCCTTSCSEEEEEECCTHHHH-------
T ss_pred             eEEEEcccccCcccccccccccchHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCCCCeEEEEeCChhhcc-------
Confidence            999999997532  333333    4899999999999999999999999764210 01135999999988776       


Q ss_pred             cccCCCCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCC
Q 025509          154 FDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRHN  212 (251)
Q Consensus       154 ~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~~  212 (251)
                              +.++...|+++|++++.|+++++.|+.+.|  |++++|+||++.|++....
T Consensus       141 --------~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~g--i~v~~v~Pg~v~t~~~~~~  189 (242)
T 1uay_A          141 --------GQIGQAAYAASKGGVVALTLPAARELAGWG--IRVVTVAPGLFDTPLLQGL  189 (242)
T ss_dssp             --------CCTTCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECSCSSHHHHTS
T ss_pred             --------CCCCCchhhHHHHHHHHHHHHHHHHHhhcC--cEEEEEEeccCcchhhhcc
Confidence                    566778999999999999999999999988  9999999999999987653

>2ptg_A Enoyl-acyl carrier reductase; apicomplexa, enoyl (acyl-carrier-P reductase, oxidoreductase; 2.60A {Eimeria tenella}

Probab=99.98  E-value=7.1e-33  Score=237.80  Aligned_cols=187  Identities=17%  Similarity=0.183  Sum_probs=127.6

Q ss_pred             CEEEEECC--CChhHHHHHHHHHHcCCEEEEEecCc-----------hhHH-----------HHHHHHHhhCCC-CceEE
Q 025509            1 MDIVITGA--TSGIGTETARVLALRGVHVVMGVRDI-----------AAGK-----------DVKETIVKEIPS-AKVDA   55 (251)
Q Consensus         1 k~vlItG~--s~gIG~a~a~~l~~~G~~Vi~~~r~~-----------~~~~-----------~~~~~~~~~~~~-~~v~~   55 (251)
                      |++|||||  ++|||+++|++|+++|++|++++|++           ++++           ++.+++.+.... ....+
T Consensus        10 k~~lVTGa~~s~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   89 (319)
T 2ptg_A           10 KTAFVAGVADSNGYGWAICKLLRAAGARVLVGTWPPVYSIFKKGLESSRFEQDSFYAQEPSSKVAAEAAEKPVDLVFDKI   89 (319)
T ss_dssp             CEEEEECCCCTTSHHHHHHHHHHHTTCEEEEEECHHHHHHHHC--------------------------------CCSEE
T ss_pred             CEEEEeCCCCCCcHHHHHHHHHHHCCCEEEEEeccccccchhhhhhhhhhhhhhhhhcchhhhHHHHhhhcccccccccc
Confidence            57999999  89999999999999999999998753           1111           112222211000 01244


Q ss_pred             EEecC------------CC--------HHHHHHHHHHHHhcCCCeeEEEEcCCCC----CCCCcCCchhhHHHHHHHHHH
Q 025509           56 MELDL------------SS--------LASVRNFASEYNIQHHQLNILINNAGIM----GTPFMLSKDNIELQFATNHLG  111 (251)
Q Consensus        56 ~~~D~------------~~--------~~~i~~~~~~~~~~~g~id~lv~~ag~~----~~~~~~~~~~~~~~~~~n~~~  111 (251)
                      +.+|+            ++        .++++++++++.+++|++|+||||||+.    .++.+.+.++|++.+++|+.+
T Consensus        90 ~~~d~~~~~~~~~~~Dv~~~~~~~~~d~~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g  169 (319)
T 2ptg_A           90 YPLDAVFDTPQDVPPEVSSNKRYAGVGGFTISEVAEAVRADVGQIDILVHSLANGPEVTKPLLQTSRKGYLAAVSSSSYS  169 (319)
T ss_dssp             EECCTTCCSGGGSCHHHHCC--CTTSCCCSHHHHHHHHHHHHSCEEEEEEEEECCSSSSSCGGGCCHHHHHHHHHHHTHH
T ss_pred             ccccccccccccccchhcccccccccCHHHHHHHHHHHHHHcCCCCEEEECCccCCCCCCccccCCHHHHHHHHhHhhHH
Confidence            44442            22        4588999999998999999999999964    345678899999999999999


Q ss_pred             HHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccccCCCCCCCCcc-cccchhHHHHHHHHHHHHHHhcc-
Q 025509          112 HFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGF-RAYSQSKLANILHANELARRLKE-  189 (251)
Q Consensus       112 ~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~-~~Y~~sK~a~~~~~~~la~e~~~-  189 (251)
                      ++.++++++|+|++       .|+||++||.++..               +.+++ ..|++||+|+++|+++|+.|+++ 
T Consensus       170 ~~~l~~~~~~~m~~-------~g~Iv~isS~~~~~---------------~~~~~~~~Y~asKaal~~l~~~la~el~~~  227 (319)
T 2ptg_A          170 FVSLLQHFLPLMKE-------GGSALALSYIASEK---------------VIPGYGGGMSSAKAALESDCRTLAFEAGRA  227 (319)
T ss_dssp             HHHHHHHHGGGEEE-------EEEEEEEEECC---------------------------------THHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHhc-------CceEEEEecccccc---------------ccCccchhhHHHHHHHHHHHHHHHHHhccc
Confidence            99999999999854       37999999988765               55666 68999999999999999999985 


Q ss_pred             CCCcEEEEEeeCCcccCCcccC
Q 025509          190 DGVDITANSVHPGAIATNIIRH  211 (251)
Q Consensus       190 ~g~~i~v~~v~Pg~v~t~~~~~  211 (251)
                      +|  |+||+|+||+|+|++...
T Consensus       228 ~g--Irvn~v~PG~v~T~~~~~  247 (319)
T 2ptg_A          228 RA--VRVNCISAGPLKSRAASA  247 (319)
T ss_dssp             HC--CEEEEEEECCCC------
T ss_pred             cC--eeEEEEeeCCccChhhhh
Confidence            78  999999999999998764

>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A*

Probab=99.97  E-value=6.5e-32  Score=224.53  Aligned_cols=181  Identities=22%  Similarity=0.236  Sum_probs=137.4

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      |++|||||++|||+++|++|+++|++|++++|++++++.              . +.+|+++.++++++++++   ++++
T Consensus         2 k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~--------------~-~~~Dl~~~~~v~~~~~~~---~~~i   63 (257)
T 1fjh_A            2 SIIVISGCATGIGAATRKVLEAAGHQIVGIDIRDAEVIA--------------D-LSTAEGRKQAIADVLAKC---SKGM   63 (257)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSSEEC--------------C-TTSHHHHHHHHHHHHTTC---TTCC
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCchhhcc--------------c-cccCCCCHHHHHHHHHHh---CCCC
Confidence            589999999999999999999999999999998754211              1 668999999998887733   3799


Q ss_pred             eEEEEcCCCCCCCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCccccc----
Q 025509           81 NILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDK----  156 (251)
Q Consensus        81 d~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~----  156 (251)
                      |+||||||+..+     .+.|++.+++|+.+++.++++++|+|+++     +.++||++||.++...........+    
T Consensus        64 d~lv~~Ag~~~~-----~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-----~~g~iv~isS~~~~~~~~~~~~~~~~~~~  133 (257)
T 1fjh_A           64 DGLVLCAGLGPQ-----TKVLGNVVSVNYFGATELMDAFLPALKKG-----HQPAAVVISSVASAHLAFDKNPLALALEA  133 (257)
T ss_dssp             SEEEECCCCCTT-----CSSHHHHHHHHTHHHHHHHHHHHHHHHTS-----SSCEEEEECCGGGGSSCGGGCTTHHHHHH
T ss_pred             CEEEECCCCCCC-----cccHHHHHHHhhHHHHHHHHHHHHHHhhc-----CCcEEEEECChhhhccccccchhhhhhcc
Confidence            999999997442     23489999999999999999999999875     4689999999887631100000000    


Q ss_pred             ---------CCCCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccC
Q 025509          157 ---------INDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  211 (251)
Q Consensus       157 ---------~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  211 (251)
                               .....+.++...|++||++++.|+++++.|+.+.|  |+||+|+||++.|++...
T Consensus       134 ~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g--i~v~~v~PG~v~t~~~~~  195 (257)
T 1fjh_A          134 GEEAKARAIVEHAGEQGGNLAYAGSKNALTVAVRKRAAAWGEAG--VRLNTIAPGATETPLLQA  195 (257)
T ss_dssp             TCHHHHHHHHHTCCTTHHHHHHHHHHHHHHHHHHHTHHHHHHTT--CEEEEEEECC--------
T ss_pred             cchhhhhhhhhcccCCCCccHHHHHHHHHHHHHHHHHHHHhhcC--eEEEEEeeCCCCCccchh
Confidence                     00001344678999999999999999999999999  999999999999999764

>2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus}

Probab=99.97  E-value=1.7e-30  Score=208.95  Aligned_cols=171  Identities=23%  Similarity=0.285  Sum_probs=146.3

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      |++|||||++|||++++++|+++  +|++++|++.++++..+++     +.  .++.+|++|++++.+++++    ++++
T Consensus         1 k~vlVtGasg~iG~~la~~l~~~--~V~~~~r~~~~~~~~~~~~-----~~--~~~~~D~~~~~~~~~~~~~----~~~i   67 (207)
T 2yut_A            1 MRVLITGATGGLGGAFARALKGH--DLLLSGRRAGALAELAREV-----GA--RALPADLADELEAKALLEE----AGPL   67 (207)
T ss_dssp             CEEEEETTTSHHHHHHHHHTTTS--EEEEECSCHHHHHHHHHHH-----TC--EECCCCTTSHHHHHHHHHH----HCSE
T ss_pred             CEEEEEcCCcHHHHHHHHHHHhC--CEEEEECCHHHHHHHHHhc-----cC--cEEEeeCCCHHHHHHHHHh----cCCC
Confidence            68999999999999999999998  9999999987776665544     22  7889999999999999887    5799


Q ss_pred             eEEEEcCCCCC--CCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccccCC
Q 025509           81 NILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKIN  158 (251)
Q Consensus        81 d~lv~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~  158 (251)
                      |+||||||...  ++.+.+.++|++.+++|+.+++.+++++    .++     +.++||++||..+..            
T Consensus        68 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~----~~~-----~~~~iv~~sS~~~~~------------  126 (207)
T 2yut_A           68 DLLVHAVGKAGRASVREAGRDLVEEMLAAHLLTAAFVLKHA----RFQ-----KGARAVFFGAYPRYV------------  126 (207)
T ss_dssp             EEEEECCCCCCCBCSCC---CHHHHHHHHHHHHHHHHHHHC----CEE-----EEEEEEEECCCHHHH------------
T ss_pred             CEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHH----Hhc-----CCcEEEEEcChhhcc------------
Confidence            99999999753  3456788999999999999999999998    221     357999999988766            


Q ss_pred             CCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCccc
Q 025509          159 DPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIR  210 (251)
Q Consensus       159 ~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~  210 (251)
                         +.++...|+++|++++.|+++++.++.+.|  |++++|+||++.|++..
T Consensus       127 ---~~~~~~~Y~~sK~a~~~~~~~~~~~~~~~g--i~v~~v~pg~v~t~~~~  173 (207)
T 2yut_A          127 ---QVPGFAAYAAAKGALEAYLEAARKELLREG--VHLVLVRLPAVATGLWA  173 (207)
T ss_dssp             ---SSTTBHHHHHHHHHHHHHHHHHHHHHHTTT--CEEEEECCCCBCSGGGG
T ss_pred             ---CCCCcchHHHHHHHHHHHHHHHHHHHhhhC--CEEEEEecCcccCCCcc
Confidence               667788999999999999999999999888  99999999999999843

>3qp9_A Type I polyketide synthase pikaii; rossmann fold, ketoreductase, epimerization, oxidoreductase; 1.88A {Streptomyces venezuelae}

Probab=99.97  E-value=2.7e-30  Score=235.13  Aligned_cols=183  Identities=16%  Similarity=0.151  Sum_probs=156.4

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCE-EEEE-ecCc-------------hhHHHHHHHHHhhCCCCceEEEEecCCCHHH
Q 025509            1 MDIVITGATSGIGTETARVLALRGVH-VVMG-VRDI-------------AAGKDVKETIVKEIPSAKVDAMELDLSSLAS   65 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~-Vi~~-~r~~-------------~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~   65 (251)
                      +++|||||++|||.++|++|+++|++ |+++ +|+.             +.+++..+++.+.  +.++.++.+|++|.++
T Consensus       252 ~~vLITGgsgGIG~~lA~~La~~G~~~vvl~~~R~~~~~~~~~~~~~~~~~~~~~~~~l~~~--g~~v~~~~~Dvtd~~~  329 (525)
T 3qp9_A          252 GTVLVTGAEEPAAAEAARRLARDGAGHLLLHTTPSGSEGAEGTSGAAEDSGLAGLVAELADL--GATATVVTCDLTDAEA  329 (525)
T ss_dssp             SEEEESSTTSHHHHHHHHHHHHHTCCEEEEEECCCC---------------CHHHHHHHHHH--TCEEEEEECCTTSHHH
T ss_pred             CEEEEECCCCcHHHHHHHHHHHcCCCEEEEEeCCCCCCccccccccccCHHHHHHHHHHHhc--CCEEEEEECCCCCHHH
Confidence            58999999999999999999999996 7788 8883             4456666666655  6789999999999999


Q ss_pred             HHHHHHHHHhcCCCeeEEEEcCCCCC--CCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCcc
Q 025509           66 VRNFASEYNIQHHQLNILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEG  143 (251)
Q Consensus        66 i~~~~~~~~~~~g~id~lv~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~  143 (251)
                      +.++++++. +++++|+||||||+..  ++.+.+.++++.++++|+.|++++.+.+.+.+++++    ..++||++||.+
T Consensus       330 v~~~~~~i~-~~g~id~vVh~AGv~~~~~~~~~~~~~~~~v~~~nv~g~~~L~~~~~~~~~~~~----~~~~iV~~SS~a  404 (525)
T 3qp9_A          330 AARLLAGVS-DAHPLSAVLHLPPTVDSEPLAATDADALARVVTAKATAALHLDRLLREAAAAGG----RPPVLVLFSSVA  404 (525)
T ss_dssp             HHHHHHTSC-TTSCEEEEEECCCCCCCCCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHTC--------CCCEEEEEEEGG
T ss_pred             HHHHHHHHH-hcCCCcEEEECCcCCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHhccccccCC----CCCEEEEECCHH
Confidence            999999988 7899999999999864  366789999999999999999999999999987641    158999999999


Q ss_pred             ccccccCCcccccCCCCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccC
Q 025509          144 HRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  211 (251)
Q Consensus       144 ~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  211 (251)
                      +..               +.+++..|+++|+++++|    +.++...|  |++++|+||+++|+|...
T Consensus       405 ~~~---------------g~~g~~~YaaaKa~l~~l----A~~~~~~g--i~v~sI~pG~~~tgm~~~  451 (525)
T 3qp9_A          405 AIW---------------GGAGQGAYAAGTAFLDAL----AGQHRADG--PTVTSVAWSPWEGSRVTE  451 (525)
T ss_dssp             GTT---------------CCTTCHHHHHHHHHHHHH----HTSCCSSC--CEEEEEEECCBTTSGGGS
T ss_pred             HcC---------------CCCCCHHHHHHHHHHHHH----HHHHHhCC--CCEEEEECCccccccccc
Confidence            887               678889999999999876    56777778  999999999999999854

>3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua}

Probab=99.96  E-value=3.7e-30  Score=206.48  Aligned_cols=161  Identities=16%  Similarity=0.233  Sum_probs=142.2

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      |++|||||++|||++++++|+ +|++|++++|+..                   ++.+|++++++++++++++    +++
T Consensus         4 M~vlVtGasg~iG~~~~~~l~-~g~~V~~~~r~~~-------------------~~~~D~~~~~~~~~~~~~~----~~~   59 (202)
T 3d7l_A            4 MKILLIGASGTLGSAVKERLE-KKAEVITAGRHSG-------------------DVTVDITNIDSIKKMYEQV----GKV   59 (202)
T ss_dssp             CEEEEETTTSHHHHHHHHHHT-TTSEEEEEESSSS-------------------SEECCTTCHHHHHHHHHHH----CCE
T ss_pred             cEEEEEcCCcHHHHHHHHHHH-CCCeEEEEecCcc-------------------ceeeecCCHHHHHHHHHHh----CCC
Confidence            479999999999999999999 9999999999763                   3789999999999998875    689


Q ss_pred             eEEEEcCCCCC--CCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccccCC
Q 025509           81 NILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKIN  158 (251)
Q Consensus        81 d~lv~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~  158 (251)
                      |+||||||...  +..+.+.++|++.+++|+.+++.+++++.+.+.+       +++||++||..+..            
T Consensus        60 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-------~~~iv~~sS~~~~~------------  120 (202)
T 3d7l_A           60 DAIVSATGSATFSPLTELTPEKNAVTISSKLGGQINLVLLGIDSLND-------KGSFTLTTGIMMED------------  120 (202)
T ss_dssp             EEEEECCCCCCCCCGGGCCHHHHHHHHHTTTHHHHHHHHTTGGGEEE-------EEEEEEECCGGGTS------------
T ss_pred             CEEEECCCCCCCCChhhCCHHHHHHHHhhccHHHHHHHHHHHHHhcc-------CCEEEEEcchhhcC------------
Confidence            99999999653  3456788999999999999999999999998743       37999999987665            


Q ss_pred             CCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCccc
Q 025509          159 DPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIR  210 (251)
Q Consensus       159 ~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~  210 (251)
                         +.++...|+.+|++++.++++++.|+ +.|  |+++.|+||++.|++..
T Consensus       121 ---~~~~~~~Y~~sK~~~~~~~~~~~~e~-~~g--i~v~~v~pg~v~~~~~~  166 (202)
T 3d7l_A          121 ---PIVQGASAAMANGAVTAFAKSAAIEM-PRG--IRINTVSPNVLEESWDK  166 (202)
T ss_dssp             ---CCTTCHHHHHHHHHHHHHHHHHTTSC-STT--CEEEEEEECCBGGGHHH
T ss_pred             ---CCCccHHHHHHHHHHHHHHHHHHHHc-cCC--eEEEEEecCccCCchhh
Confidence               56677899999999999999999999 778  99999999999999743

>2uv8_A Fatty acid synthase subunit alpha (FAS2); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_A* 3hmj_A*

Probab=99.96  E-value=6.5e-29  Score=247.19  Aligned_cols=186  Identities=19%  Similarity=0.141  Sum_probs=156.2

Q ss_pred             CEEEEECCCCh-hHHHHHHHHHHcCCEEEEE-ecCchhHHHHHHHHHhhCC--CCceEEEEecCCCHHHHHHHHHHHHhc
Q 025509            1 MDIVITGATSG-IGTETARVLALRGVHVVMG-VRDIAAGKDVKETIVKEIP--SAKVDAMELDLSSLASVRNFASEYNIQ   76 (251)
Q Consensus         1 k~vlItG~s~g-IG~a~a~~l~~~G~~Vi~~-~r~~~~~~~~~~~~~~~~~--~~~v~~~~~D~~~~~~i~~~~~~~~~~   76 (251)
                      |++|||||++| ||+++|+.|+++|++|+++ +|+.+.+++..+++.+.++  +..+.++.+|++|.++++++++++.++
T Consensus       676 KvaLVTGASsGgIG~aIA~~La~~GA~Vvl~~~R~~~~l~~~~~eL~~~~~~~g~~v~~v~~DVsd~~sV~alv~~i~~~  755 (1887)
T 2uv8_A          676 KYVLITGAGKGSIGAEVLQGLLQGGAKVVVTTSRFSKQVTDYYQSIYAKYGAKGSTLIVVPFNQGSKQDVEALIEFIYDT  755 (1887)
T ss_dssp             CEEEEESCCSSSHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHHHHHHHSC
T ss_pred             CEEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCCHHHHHHHHHHHHHHhhcCCCeEEEEEecCCCHHHHHHHHHHHHHh
Confidence            68999999998 9999999999999999998 5888788777777755432  457899999999999999999999888


Q ss_pred             -----CC-CeeEEEEcCCCCC---CCCcCC--chhhHHHHHHHHHHHHHHHHHH--HHHHHHhhccCCCCceEEEEcCcc
Q 025509           77 -----HH-QLNILINNAGIMG---TPFMLS--KDNIELQFATNHLGHFLLTNLL--LDTMKKTARKSGGEGRIINVSSEG  143 (251)
Q Consensus        77 -----~g-~id~lv~~ag~~~---~~~~~~--~~~~~~~~~~n~~~~~~l~~~~--~~~~~~~~~~~~~~g~iv~vsS~~  143 (251)
                           +| ++|+||||||+..   ++.+.+  .++|+++|++|+.+++.+++.+  +|.|.++     +.|+||++||..
T Consensus       756 ~~~~G~G~~LDiLVNNAGi~~~~~~l~d~t~~~e~~~~v~~vNv~g~~~l~~a~~~lp~m~~~-----~~G~IVnISS~a  830 (1887)
T 2uv8_A          756 EKNGGLGWDLDAIIPFAAIPEQGIELEHIDSKSEFAHRIMLTNILRMMGCVKKQKSARGIETR-----PAQVILPMSPNH  830 (1887)
T ss_dssp             TTTTSCCCCCSEEEECCCCCCCSBCGGGCCHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCCSC-----CEEEEEEECSCT
T ss_pred             ccccccCCCCeEEEECCCcCCCCCChhhCCcchHHHHHHHHHHHHHHHHHHHHHHhhhhhhhC-----CCCEEEEEcChH
Confidence                 66 9999999999753   445667  7899999999999999999987  5666543     358999999987


Q ss_pred             ccccccCCcccccCCCCCCCCcccccchhHHHHHHH-HHHHHHHhccCCCcEEEEEeeCCccc-CCcccC
Q 025509          144 HRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANILH-ANELARRLKEDGVDITANSVHPGAIA-TNIIRH  211 (251)
Q Consensus       144 ~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~-~~~la~e~~~~g~~i~v~~v~Pg~v~-t~~~~~  211 (251)
                      +..               +  +...|++||+|+.+| ++.++.++++.   |+||+|+||+++ |+|+..
T Consensus       831 g~~---------------g--g~~aYaASKAAL~~Lttr~lA~ela~~---IrVNaV~PG~V~tT~m~~~  880 (1887)
T 2uv8_A          831 GTF---------------G--GDGMYSESKLSLETLFNRWHSESWANQ---LTVCGAIIGWTRGTGLMSA  880 (1887)
T ss_dssp             TCS---------------S--CBTTHHHHHHHGGGHHHHHHHSSCTTT---EEEEEEEECCEECC-----
T ss_pred             hcc---------------C--CCchHHHHHHHHHHHHHHHHHHHhCCC---eEEEEEEeccccccccccc
Confidence            664               3  567899999999999 89999999865   999999999999 888654

>3mje_A AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.36A {Streptomyces nodosus} PDB: 3mjc_A* 3mjs_A* 3mjv_A* 3mjt_A*

Probab=99.96  E-value=3.5e-28  Score=219.16  Aligned_cols=177  Identities=20%  Similarity=0.237  Sum_probs=150.2

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCC-EEEEEecCc---hhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhc
Q 025509            1 MDIVITGATSGIGTETARVLALRGV-HVVMGVRDI---AAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQ   76 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~-~Vi~~~r~~---~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~   76 (251)
                      +++|||||++|||+++|++|+++|+ +|++++|+.   ...++..+++.+.  +.++.++.||++|.+++.++++++.+.
T Consensus       240 ~~vLITGgsgGIG~alA~~La~~Ga~~vvl~~R~~~~~~~~~~l~~~l~~~--g~~v~~~~~Dvtd~~~v~~~~~~i~~~  317 (496)
T 3mje_A          240 GSVLVTGGTGGIGGRVARRLAEQGAAHLVLTSRRGADAPGAAELRAELEQL--GVRVTIAACDAADREALAALLAELPED  317 (496)
T ss_dssp             SEEEEETCSSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTHHHHHHHHHHT--TCEEEEEECCTTCHHHHHHHHHTCCTT
T ss_pred             CEEEEECCCCchHHHHHHHHHHCCCcEEEEEeCCCCChHHHHHHHHHHHhc--CCeEEEEEccCCCHHHHHHHHHHHHHh
Confidence            5899999999999999999999999 899999974   3456666666554  678999999999999999999998766


Q ss_pred             CCCeeEEEEcCCCC-C--CCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcc
Q 025509           77 HHQLNILINNAGIM-G--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIR  153 (251)
Q Consensus        77 ~g~id~lv~~ag~~-~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~  153 (251)
                       +++|+||||||+. .  ++.+++.++|+.++++|+.+++++.+.+.+.         ..++||++||.++..       
T Consensus       318 -g~ld~vVh~AGv~~~~~~l~~~t~e~~~~vl~~nv~g~~~L~~~~~~~---------~~~~iV~~SS~a~~~-------  380 (496)
T 3mje_A          318 -APLTAVFHSAGVAHDDAPVADLTLGQLDALMRAKLTAARHLHELTADL---------DLDAFVLFSSGAAVW-------  380 (496)
T ss_dssp             -SCEEEEEECCCCCCSCCCTTTCCHHHHHHHHHTTHHHHHHHHHHHTTS---------CCSEEEEEEEHHHHT-------
T ss_pred             -CCCeEEEECCcccCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHhhcc---------CCCEEEEEeChHhcC-------
Confidence             6899999999976 3  3677899999999999999999988876554         357999999999887       


Q ss_pred             cccCCCCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCccc
Q 025509          154 FDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIR  210 (251)
Q Consensus       154 ~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~  210 (251)
                              +.+++..|+++|+++++|++    ++...|  |++++|+||++.++.+.
T Consensus       381 --------g~~g~~~YaAaKa~ldala~----~~~~~G--i~v~sV~pG~w~~~gm~  423 (496)
T 3mje_A          381 --------GSGGQPGYAAANAYLDALAE----HRRSLG--LTASSVAWGTWGEVGMA  423 (496)
T ss_dssp             --------TCTTCHHHHHHHHHHHHHHH----HHHHTT--CCCEEEEECEESSSCC-
T ss_pred             --------CCCCcHHHHHHHHHHHHHHH----HHHhcC--CeEEEEECCcccCCccc
Confidence                    67888999999999988766    455667  99999999999776654

>2uv9_A Fatty acid synthase alpha subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; 3.1A {Thermomyces lanuginosus} PDB: 2uvb_A*

Probab=99.96  E-value=4.9e-28  Score=240.54  Aligned_cols=186  Identities=18%  Similarity=0.112  Sum_probs=156.3

Q ss_pred             CEEEEECCCCh-hHHHHHHHHHHcCCEEEEEe-cCchhHHHHHHHHHhhCC--CCceEEEEecCCCHHHHHHHHHHHHhc
Q 025509            1 MDIVITGATSG-IGTETARVLALRGVHVVMGV-RDIAAGKDVKETIVKEIP--SAKVDAMELDLSSLASVRNFASEYNIQ   76 (251)
Q Consensus         1 k~vlItG~s~g-IG~a~a~~l~~~G~~Vi~~~-r~~~~~~~~~~~~~~~~~--~~~v~~~~~D~~~~~~i~~~~~~~~~~   76 (251)
                      |++|||||++| ||+++|++|+++|++|++++ |+.+.+.+..+++.+.+.  +..+.++.+|++|.++++++++++.++
T Consensus       653 KvaLVTGASgGgIG~aIAr~LA~~GA~VVl~~~R~~~~l~~~a~eL~~el~~~G~~v~~v~~DVsd~esV~alv~~i~~~  732 (1878)
T 2uv9_A          653 KHALMTGAGAGSIGAEVLQGLLSGGAKVIVTTSRFSRQVTEYYQGIYARCGARGSQLVVVPFNQGSKQDVEALVNYIYDT  732 (1878)
T ss_dssp             CEEEEESCCTTSHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHHHHHHHCS
T ss_pred             CEEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCChHHHHHHHHHHHHHhhccCCeEEEEEcCCCCHHHHHHHHHHHHHh
Confidence            68999999999 99999999999999999985 667777776666654432  457899999999999999999999988


Q ss_pred             ---CC-CeeEEEEcCCCCC---CCCcCC--chhhHHHHHHHHHHHHHHHHH--HHHHHHHhhccCCCCceEEEEcCcccc
Q 025509           77 ---HH-QLNILINNAGIMG---TPFMLS--KDNIELQFATNHLGHFLLTNL--LLDTMKKTARKSGGEGRIINVSSEGHR  145 (251)
Q Consensus        77 ---~g-~id~lv~~ag~~~---~~~~~~--~~~~~~~~~~n~~~~~~l~~~--~~~~~~~~~~~~~~~g~iv~vsS~~~~  145 (251)
                         +| ++|+||||||+..   ++.+.+  .++|+.++++|+.+++.+++.  +++.|.++     +.|+||++||.++.
T Consensus       733 ~~~~G~~IDiLVnNAGi~~~~~~l~d~t~~~e~~~~vl~vNv~g~~~l~~a~~~lp~M~~~-----~~G~IVnISS~ag~  807 (1878)
T 2uv9_A          733 KNGLGWDLDYVVPFAAIPENGREIDSIDSKSELAHRIMLTNLLRLLGAIKTQKKERGYETR-----PAQVILPLSPNHGT  807 (1878)
T ss_dssp             SSSCCCCCSEEEECCCCCCTTCCTTCCCHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCSC-----CEEECCEECSCSSS
T ss_pred             hcccCCCCcEEEeCcccccCCCChhhcCcCHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhC-----CCCEEEEEcchhhc
Confidence               88 9999999999753   456677  799999999999999999987  56666543     35899999998776


Q ss_pred             ccccCCcccccCCCCCCCCcccccchhHHHHHHHHHHHHHH-hccCCCcEEEEEeeCCccc-CCcccC
Q 025509          146 LAYHEGIRFDKINDPSGYNGFRAYSQSKLANILHANELARR-LKEDGVDITANSVHPGAIA-TNIIRH  211 (251)
Q Consensus       146 ~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e-~~~~g~~i~v~~v~Pg~v~-t~~~~~  211 (251)
                      .               +  +...|++||+|+++|++.++.+ +++ +  |+||+|+||+++ |+|+..
T Consensus       808 ~---------------g--g~~aYaASKAAL~aLt~~laAeEla~-~--IrVNaVaPG~V~gT~m~~~  855 (1878)
T 2uv9_A          808 F---------------G--NDGLYSESKLALETLFNRWYSESWGN-Y--LTICGAVIGWTRGTGLMSA  855 (1878)
T ss_dssp             S---------------S--CCSSHHHHHHHHTTHHHHHHHSTTTT-T--EEEEEEEECCBCCTTSCSH
T ss_pred             c---------------C--CchHHHHHHHHHHHHHHHHHHHHcCC-C--eEEEEEEecceecCccccc
Confidence            5               2  4678999999999999877665 654 3  999999999999 998753

>2pff_A Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl-carrier-PR; fatty acid synthase, acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl synthase, dehydratase; 4.00A {Saccharomyces cerevisiae}

Probab=99.95  E-value=2.8e-29  Score=243.26  Aligned_cols=185  Identities=19%  Similarity=0.143  Sum_probs=157.0

Q ss_pred             CEEEEECCCCh-hHHHHHHHHHHcCCEEEEE-ecCchhHHHHHHHHHhhCC--CCceEEEEecCCCHHHHHHHHHHHHhc
Q 025509            1 MDIVITGATSG-IGTETARVLALRGVHVVMG-VRDIAAGKDVKETIVKEIP--SAKVDAMELDLSSLASVRNFASEYNIQ   76 (251)
Q Consensus         1 k~vlItG~s~g-IG~a~a~~l~~~G~~Vi~~-~r~~~~~~~~~~~~~~~~~--~~~v~~~~~D~~~~~~i~~~~~~~~~~   76 (251)
                      |++|||||++| ||+++|++|+++|++|+++ +|+.+.+++..+++.+..+  +..+.++++|++|.++++++++++.+.
T Consensus       477 KvALVTGASgGGIGrAIAr~LA~~GA~VVL~~~R~~e~lee~a~eL~ael~a~Ga~V~vV~~DVTD~esVeaLVe~I~e~  556 (1688)
T 2pff_A          477 KYVLITGAGKGSIGAEVLQGLLQGGAKVVVTTSRFSKQVTDYYQSIYAKYGAKGSTLIVVPFNQGSKQDVEALIEFIYDT  556 (1688)
T ss_dssp             CCEEECSCSSSSTHHHHHHHHHHHTCEEEEEESSCSTTTTTHHHHTTTTTCCTTCEEEEEECCSSSTTHHHHHHHHHHSC
T ss_pred             CEEEEECCChHHHHHHHHHHHHHCcCEEEEEeCCCHHHHHHHHHHHHHHhhcCCCeEEEEEeCCCCHHHHHHHHHHHHHh
Confidence            57999999998 9999999999999999998 5777777766666644432  457899999999999999999999888


Q ss_pred             -----CC-CeeEEEEcCCCCC---CCCcCC--chhhHHHHHHHHHHHHHHHHHH--HHHHHHhhccCCCCceEEEEcCcc
Q 025509           77 -----HH-QLNILINNAGIMG---TPFMLS--KDNIELQFATNHLGHFLLTNLL--LDTMKKTARKSGGEGRIINVSSEG  143 (251)
Q Consensus        77 -----~g-~id~lv~~ag~~~---~~~~~~--~~~~~~~~~~n~~~~~~l~~~~--~~~~~~~~~~~~~~g~iv~vsS~~  143 (251)
                           +| ++|+||||||+..   ++.+.+  .++|++++++|+.+++.+++++  +|.|+++     +.|+||++||.+
T Consensus       557 ~~~~GfG~~IDILVNNAGI~~~g~~l~dlt~s~Ed~~rv~~VNL~G~~~Ltqaa~~lp~M~kr-----ggGrIVnISSiA  631 (1688)
T 2pff_A          557 EKNGGLGWDLDAIIPFAAIPEQGIELEHIDSKSEFAHRIMLTNILRMMGCVKKQKSARGIETR-----PAQVILPMSPNH  631 (1688)
T ss_dssp             TTSSSCCCCCCEEECCCCCCCCSBCSSSCTTHHHHHHHHTTHHHHHHHHHHHHHHHHHTCTTS-----CEEECCCCCSCT
T ss_pred             ccccccCCCCeEEEECCCcCCCCCChhhCCCCHHHHHHHHHHHHHHHHHHHHHHHhChHHHhC-----CCCEEEEEEChH
Confidence                 77 8999999999753   445666  8899999999999999999998  6777653     358999999987


Q ss_pred             ccccccCCcccccCCCCCCCCcccccchhHHHHHHH-HHHHHHHhccCCCcEEEEEeeCCccc-CCccc
Q 025509          144 HRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANILH-ANELARRLKEDGVDITANSVHPGAIA-TNIIR  210 (251)
Q Consensus       144 ~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~-~~~la~e~~~~g~~i~v~~v~Pg~v~-t~~~~  210 (251)
                      +..               +  +...|++||+|+++| ++.++.++++.   |+||+|+||+++ |+|..
T Consensus       632 G~~---------------G--g~saYaASKAAL~aLttrsLAeEla~~---IRVNaVaPG~V~TT~M~~  680 (1688)
T 2pff_A          632 GTF---------------G--GDGMYSESKLSLETLFNRWHSESWANQ---LTVCGAIIGWTRGTGLMS  680 (1688)
T ss_dssp             TTS---------------S--CBTTHHHHHHHHTHHHHHTTTSSCTTT---EECCCCCCCCCCCCSSSC
T ss_pred             hcc---------------C--CchHHHHHHHHHHHHHHHHHHHHcCCC---eEEEEEEECcCcCCcccC
Confidence            664               3  567899999999999 78888888764   999999999999 78765

>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP}

Probab=99.95  E-value=2.4e-28  Score=202.11  Aligned_cols=181  Identities=23%  Similarity=0.197  Sum_probs=142.8

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      |++|||||+||||++++++|+++|++|++++|+.++.+           .    .+.+|+++.++++++++++   .+++
T Consensus         2 k~vlVtGasg~iG~~l~~~L~~~g~~V~~~~r~~~~~~-----------~----~~~~D~~~~~~~~~~~~~~---~~~~   63 (255)
T 2dkn_A            2 SVIAITGSASGIGAALKELLARAGHTVIGIDRGQADIE-----------A----DLSTPGGRETAVAAVLDRC---GGVL   63 (255)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSSEE-----------C----CTTSHHHHHHHHHHHHHHH---TTCC
T ss_pred             cEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCChhHcc-----------c----cccCCcccHHHHHHHHHHc---CCCc
Confidence            58999999999999999999999999999999865421           0    1568999999999988865   3689


Q ss_pred             eEEEEcCCCCCCCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCccccc----
Q 025509           81 NILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDK----  156 (251)
Q Consensus        81 d~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~----  156 (251)
                      |+||||||....     .++++..+++|+.+++.+++++.+.|+++     +.++||++||..+........+..+    
T Consensus        64 d~vi~~Ag~~~~-----~~~~~~~~~~N~~~~~~l~~~~~~~~~~~-----~~~~iv~~sS~~~~~~~~~~~~~~~~~~~  133 (255)
T 2dkn_A           64 DGLVCCAGVGVT-----AANSGLVVAVNYFGVSALLDGLAEALSRG-----QQPAAVIVGSIAATQPGAAELPMVEAMLA  133 (255)
T ss_dssp             SEEEECCCCCTT-----SSCHHHHHHHHTHHHHHHHHHHHHHHHTS-----SSCEEEEECCGGGGSTTGGGCHHHHHHHH
T ss_pred             cEEEECCCCCCc-----chhHHHHHHHHhHHHHHHHHHHHHHhhhc-----CCceEEEEeccccccccccccchhhhhcc
Confidence            999999997432     34589999999999999999999999874     3589999999877652111000000    


Q ss_pred             CCCC-------CCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccC
Q 025509          157 INDP-------SGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  211 (251)
Q Consensus       157 ~~~~-------~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  211 (251)
                      .+++       ...++...|+.+|++++.+++.++.++.+.|  |++++|+||++.|++...
T Consensus       134 ~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~~~~~~~~g--i~v~~v~pg~v~~~~~~~  193 (255)
T 2dkn_A          134 GDEARAIELAEQQGQTHLAYAGSKYAVTCLARRNVVDWAGRG--VRLNVVAPGAVETPLLQA  193 (255)
T ss_dssp             TCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHTHHHHHHTT--CEEEEEEECCBCSHHHHH
T ss_pred             cchhhhhhhccccCCcchhHHHHHHHHHHHHHHHHHHHhhcC--cEEEEEcCCcccchhhhh
Confidence            0000       0013567899999999999999999999888  999999999999998653

>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa}

Probab=99.95  E-value=3.7e-28  Score=230.54  Aligned_cols=175  Identities=21%  Similarity=0.305  Sum_probs=154.4

Q ss_pred             CEEEEECCCChhHHHHHHHHH-HcCC-EEEEEecC---chhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHh
Q 025509            1 MDIVITGATSGIGTETARVLA-LRGV-HVVMGVRD---IAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNI   75 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~-~~G~-~Vi~~~r~---~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~   75 (251)
                      |++|||||++|||+++|++|+ ++|+ +|++++|+   .+.+++..+++.+.  +.++.+++||++|.++++++++++.+
T Consensus       531 ~~~lItGg~~GlG~aiA~~la~~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~--G~~v~~~~~Dvsd~~~v~~~~~~~~~  608 (795)
T 3slk_A          531 GTVLVTGGTGALGAEVARHLVIERGVRNLVLVSRRGPAASGAAELVAQLTAY--GAEVSLQACDVADRETLAKVLASIPD  608 (795)
T ss_dssp             SEEEEETTTSHHHHHHHHHHHHTSSCCEEEEEESSGGGSTTHHHHHHHHHHT--TCEEEEEECCTTCHHHHHHHHHTSCT
T ss_pred             cceeeccCCCCcHHHHHHHHHHHcCCcEEEEeccCccchHHHHHHHHHHHhc--CCcEEEEEeecCCHHHHHHHHHHHHH
Confidence            579999999999999999999 7999 69999998   44566777777654  67899999999999999999999877


Q ss_pred             cCCCeeEEEEcCCCCC--CCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcc
Q 025509           76 QHHQLNILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIR  153 (251)
Q Consensus        76 ~~g~id~lv~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~  153 (251)
                      .+ ++|+||||||+..  ++.+++.++|+..+++|+.|++++.+++.|.|           +||++||.++..       
T Consensus       609 ~~-~id~lVnnAGv~~~~~~~~~t~e~~~~~~~~nv~G~~~l~~~~~~~l-----------~iV~~SS~ag~~-------  669 (795)
T 3slk_A          609 EH-PLTAVVHAAGVLDDGVSESLTVERLDQVLRPKVDGARNLLELIDPDV-----------ALVLFSSVSGVL-------  669 (795)
T ss_dssp             TS-CEEEEEECCCCCCCCCGGGCCHHHHHHHHCCCCCHHHHHHHHSCTTS-----------EEEEEEETHHHH-------
T ss_pred             hC-CCEEEEECCCcCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHhhCC-----------EEEEEccHHhcC-------
Confidence            76 9999999999864  36788999999999999999999999986554           799999999988       


Q ss_pred             cccCCCCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCccc
Q 025509          154 FDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIR  210 (251)
Q Consensus       154 ~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~  210 (251)
                              +.++++.|+++|+    |+++|++++.++|  |++|+|+||++.|+++.
T Consensus       670 --------g~~g~~~YaAaka----~~~alA~~~~~~G--i~v~sI~pG~v~t~g~~  712 (795)
T 3slk_A          670 --------GSGGQGNYAAANS----FLDALAQQRQSRG--LPTRSLAWGPWAEHGMA  712 (795)
T ss_dssp             --------TCSSCHHHHHHHH----HHHHHHHHHHHTT--CCEEEEEECCCSCCCHH
T ss_pred             --------CCCCCHHHHHHHH----HHHHHHHHHHHcC--CeEEEEECCeECcchhh
Confidence                    7888999999994    6788888999999  99999999999988654

>2fr1_A Erythromycin synthase, eryai; short chain dehydrogenase/reductase, oxidoreductase; HET: NDP; 1.79A {Saccharopolyspora erythraea} SCOP: c.2.1.2 c.2.1.2 PDB: 2fr0_A*

Probab=99.94  E-value=3.8e-26  Score=206.15  Aligned_cols=174  Identities=22%  Similarity=0.261  Sum_probs=145.4

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCC-EEEEEecCch---hHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhc
Q 025509            1 MDIVITGATSGIGTETARVLALRGV-HVVMGVRDIA---AGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQ   76 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~-~Vi~~~r~~~---~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~   76 (251)
                      +++|||||+||||++++++|+++|+ +|++++|+..   ..++..+++.+.  +.++.++.+|++|.+++.++++++ ..
T Consensus       227 ~~vLITGgtGgIG~~la~~La~~G~~~vvl~~R~~~~~~~~~~l~~~l~~~--g~~v~~~~~Dv~d~~~v~~~~~~i-~~  303 (486)
T 2fr1_A          227 GTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEAL--GARTTVAACDVTDRESVRELLGGI-GD  303 (486)
T ss_dssp             SEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTTHHHHHHHHHHT--TCEEEEEECCTTCHHHHHHHHHTS-CT
T ss_pred             CEEEEECCCCHHHHHHHHHHHHcCCCEEEEEcCCCCCcHHHHHHHHHHHhc--CCEEEEEEeCCCCHHHHHHHHHHH-Hh
Confidence            5799999999999999999999999 5999999865   355666666554  568999999999999999999988 56


Q ss_pred             CCCeeEEEEcCCCCCC--CCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCccc
Q 025509           77 HHQLNILINNAGIMGT--PFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRF  154 (251)
Q Consensus        77 ~g~id~lv~~ag~~~~--~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~  154 (251)
                      ++++|+||||||+...  +.+.+.++++.++++|+.|++++.+++.+.         +.++||++||.++..        
T Consensus       304 ~g~ld~VIh~AG~~~~~~l~~~~~~~~~~~~~~nv~g~~~L~~~~~~~---------~~~~~V~~SS~a~~~--------  366 (486)
T 2fr1_A          304 DVPLSAVFHAAATLDDGTVDTLTGERIERASRAKVLGARNLHELTREL---------DLTAFVLFSSFASAF--------  366 (486)
T ss_dssp             TSCEEEEEECCCCCCCCCGGGCCHHHHHHHTHHHHHHHHHHHHHHTTS---------CCSEEEEEEEHHHHT--------
T ss_pred             cCCCcEEEECCccCCCCccccCCHHHHHHHHHHHHHHHHHHHHHhCcC---------CCCEEEEEcChHhcC--------
Confidence            7899999999997643  557789999999999999999998876432         357999999988876        


Q ss_pred             ccCCCCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCC
Q 025509          155 DKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATN  207 (251)
Q Consensus       155 ~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~  207 (251)
                             +.+++..|+++|+++++|++    ++...|  +++++|+||++.++
T Consensus       367 -------g~~g~~~Yaaaka~l~~la~----~~~~~g--i~v~~i~pG~~~~~  406 (486)
T 2fr1_A          367 -------GAPGLGGYAPGNAYLDGLAQ----QRRSDG--LPATAVAWGTWAGS  406 (486)
T ss_dssp             -------CCTTCTTTHHHHHHHHHHHH----HHHHTT--CCCEEEEECCBC--
T ss_pred             -------CCCCCHHHHHHHHHHHHHHH----HHHhcC--CeEEEEECCeeCCC
Confidence                   66778899999999988755    445567  89999999999887

>3zen_D Fatty acid synthase; transferase, mycolic acid biosynthesis, multifunctional ENZY substrate channeling; HET: FMN; 7.50A {Mycobacterium smegmatis} PDB: 4b3y_A*

Probab=99.93  E-value=2e-25  Score=231.40  Aligned_cols=188  Identities=14%  Similarity=0.084  Sum_probs=145.5

Q ss_pred             CEEEEECCCCh-hHHHHHHHHHHcCCEEEEEecCchh-----HHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHH
Q 025509            1 MDIVITGATSG-IGTETARVLALRGVHVVMGVRDIAA-----GKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYN   74 (251)
Q Consensus         1 k~vlItG~s~g-IG~a~a~~l~~~G~~Vi~~~r~~~~-----~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~   74 (251)
                      |++|||||++| ||+++|+.|+++|++|++++|+.+.     ++++.+++...  +..+.++++|+++.++++++++++.
T Consensus      2137 KvaLVTGAs~GsIG~AiA~~La~~GA~Vvi~~r~~~~~~~~~~~~l~~~l~~~--G~~~~~v~~Dvtd~~~v~~lv~~i~ 2214 (3089)
T 3zen_D         2137 EVAVVTGASKGSIAASVVGQLLDGGATVIATTSRLDDDRLAFYKQLYRDHARF--DATLWVVPANMASYSDIDKLVEWVG 2214 (3089)
T ss_dssp             CEEEEESCCTTSHHHHHHHHHHHTTCEEEEEESCCSHHHHHHHHHHHHHHCCT--TCEEEEEECCTTCHHHHHHHHHHHT
T ss_pred             CEEEEeCCChhHHHHHHHHHHHHCCCEEEEEeCChhhhhhHHHHHHHHHHhhc--CCeEEEEEecCCCHHHHHHHHHHHH
Confidence            68999999999 9999999999999999999998766     44444444222  4578899999999999999999998


Q ss_pred             h----cCCCeeEEEEcCCCC-------CCCCcCCchhhHHH----HHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEE
Q 025509           75 I----QHHQLNILINNAGIM-------GTPFMLSKDNIELQ----FATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINV  139 (251)
Q Consensus        75 ~----~~g~id~lv~~ag~~-------~~~~~~~~~~~~~~----~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~v  139 (251)
                      +    ++|++|+||||||+.       ....+.+.++|+..    +++|+.+++.+++.+.+.|..+... ...+.++..
T Consensus      2215 ~~~~~~fG~IDILVNNAGi~d~~~~~a~~~~~~~~e~~~~~~e~~~~vnl~~~~~l~~~~~~~m~~~~~g-~~~~ii~~~ 2293 (3089)
T 3zen_D         2215 TEQTESLGPQSIHLKDAQTPTLLFPFAAPRVAGDMSEVGSRAEMEMKVLLWAVQRLISGLSKIGAERDIA-SRLHVVLPG 2293 (3089)
T ss_dssp             SCCEEEESSSEEEECCCCCCSEEEECCCCCCCCTTSCTTSHHHHHHHHHTHHHHHHHHHHHHHHHHTTCC-CCEEEEEEE
T ss_pred             hhhhhhcCCCCEEEECCCcccccCcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCC-ceeEEEEEC
Confidence            8    889999999999971       12233355556555    9999999999999999999875210 001223333


Q ss_pred             cCccccccccCCcccccCCCCCCCCcccccchhHHHHHHHHHHHHHH--hccCCCcEEEEEeeCCccc-CCcccC
Q 025509          140 SSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANILHANELARR--LKEDGVDITANSVHPGAIA-TNIIRH  211 (251)
Q Consensus       140 sS~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e--~~~~g~~i~v~~v~Pg~v~-t~~~~~  211 (251)
                      |+..+                 ..++...|++||+|+.+|+++|+.|  +++ +  |+||+|+||+|+ |+++..
T Consensus      2294 ss~~g-----------------~~g~~~aYsASKaAl~~LtrslA~E~~~a~-~--IrVn~v~PG~v~tT~l~~~ 2348 (3089)
T 3zen_D         2294 SPNRG-----------------MFGGDGAYGEAKSALDALENRWSAEKSWAE-R--VSLAHALIGWTKGTGLMGQ 2348 (3089)
T ss_dssp             CSSTT-----------------SCSSCSSHHHHGGGHHHHHHHHHHCSTTTT-T--EEEEEEECCCEECSTTTTT
T ss_pred             Ccccc-----------------cCCCchHHHHHHHHHHHHHHHHHhccccCC-C--eEEEEEeecccCCCccccc
Confidence            33221                 2234568999999999999999999  654 5  999999999998 777654

>3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A*

Probab=99.93  E-value=2.6e-25  Score=185.94  Aligned_cols=169  Identities=16%  Similarity=0.127  Sum_probs=136.2

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      |+||||||+||||++++++|+++|++|++++|++.+..           +..+.++.+|++|.+++.++++       ++
T Consensus         4 k~vlVTGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~-----------~~~~~~~~~Dl~d~~~~~~~~~-------~~   65 (267)
T 3rft_A            4 KRLLVTGAAGQLGRVMRERLAPMAEILRLADLSPLDPA-----------GPNEECVQCDLADANAVNAMVA-------GC   65 (267)
T ss_dssp             EEEEEESTTSHHHHHHHHHTGGGEEEEEEEESSCCCCC-----------CTTEEEEECCTTCHHHHHHHHT-------TC
T ss_pred             CEEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCcccc-----------CCCCEEEEcCCCCHHHHHHHHc-------CC
Confidence            57999999999999999999999999999999875422           3578999999999999998776       68


Q ss_pred             eEEEEcCCCCCCCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccccCCCC
Q 025509           81 NILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDP  160 (251)
Q Consensus        81 d~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~  160 (251)
                      |+||||||..      +.++|++.+++|+.+++.+++++.+.         +.++||++||..+........   .+.+.
T Consensus        66 D~vi~~Ag~~------~~~~~~~~~~~N~~g~~~l~~a~~~~---------~~~~iv~~SS~~~~g~~~~~~---~~~e~  127 (267)
T 3rft_A           66 DGIVHLGGIS------VEKPFEQILQGNIIGLYNLYEAARAH---------GQPRIVFASSNHTIGYYPQTE---RLGPD  127 (267)
T ss_dssp             SEEEECCSCC------SCCCHHHHHHHHTHHHHHHHHHHHHT---------TCCEEEEEEEGGGGTTSBTTS---CBCTT
T ss_pred             CEEEECCCCc------CcCCHHHHHHHHHHHHHHHHHHHHHc---------CCCEEEEEcchHHhCCCCCCC---CCCCC
Confidence            9999999972      44568999999999999999998432         357999999987764222221   23334


Q ss_pred             CCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCccc
Q 025509          161 SGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIR  210 (251)
Q Consensus       161 ~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~  210 (251)
                      .+.++...|+.||++++.+++.++.+++     ++++.|.||.+.+++..
T Consensus       128 ~~~~~~~~Y~~sK~~~e~~~~~~a~~~g-----~~~~~vr~~~v~~~~~~  172 (267)
T 3rft_A          128 VPARPDGLYGVSKCFGENLARMYFDKFG-----QETALVRIGSCTPEPNN  172 (267)
T ss_dssp             SCCCCCSHHHHHHHHHHHHHHHHHHHHC-----CCEEEEEECBCSSSCCS
T ss_pred             CCCCCCChHHHHHHHHHHHHHHHHHHhC-----CeEEEEEeecccCCCCC
Confidence            4566678999999999999999998874     66777888888776544

>2z5l_A Tylkr1, tylactone synthase starter module and modules 1 & 2; short-chain dehydrogenase/reductase, rossman fold; 1.95A {Streptomyces fradiae}

Probab=99.93  E-value=3.4e-25  Score=200.80  Aligned_cols=175  Identities=23%  Similarity=0.258  Sum_probs=146.0

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCC-EEEEEecCch---hHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhc
Q 025509            1 MDIVITGATSGIGTETARVLALRGV-HVVMGVRDIA---AGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQ   76 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~-~Vi~~~r~~~---~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~   76 (251)
                      +++|||||++|||++++++|+++|+ +|++++|+..   .+++..+++.+.  +.++.++.+|++|.+++.+++++    
T Consensus       260 ~~vLITGgtGgIG~~lA~~La~~G~~~vvl~~R~~~~~~~~~~l~~~l~~~--g~~v~~~~~Dvtd~~~v~~~~~~----  333 (511)
T 2z5l_A          260 GTVLITGGMGAIGRRLARRLAAEGAERLVLTSRRGPEAPGAAELAEELRGH--GCEVVHAACDVAERDALAALVTA----  333 (511)
T ss_dssp             SEEEEETTTSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTHHHHHHHHHTT--TCEEEEEECCSSCHHHHHHHHHH----
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCcEEEEEecCCcccHHHHHHHHHHHhc--CCEEEEEEeCCCCHHHHHHHHhc----
Confidence            5799999999999999999999999 6999999864   355666666543  56899999999999999998886    


Q ss_pred             CCCeeEEEEcCCCCCC--CCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCccc
Q 025509           77 HHQLNILINNAGIMGT--PFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRF  154 (251)
Q Consensus        77 ~g~id~lv~~ag~~~~--~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~  154 (251)
                       +++|+||||||+...  +.+.+.++++.++++|+.+++++.+.+.+..        ..++||++||.++..        
T Consensus       334 -~~ld~VVh~AGv~~~~~~~~~~~~~~~~~~~~nv~g~~~L~~~~~~~~--------~~~~~V~~SS~a~~~--------  396 (511)
T 2z5l_A          334 -YPPNAVFHTAGILDDAVIDTLSPESFETVRGAKVCGAELLHQLTADIK--------GLDAFVLFSSVTGTW--------  396 (511)
T ss_dssp             -SCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHHHHHHHHHHHTSSCT--------TCCCEEEEEEGGGTT--------
T ss_pred             -CCCcEEEECCcccCCcccccCCHHHHHHHHHHHHHHHHHHHHHHhhcc--------CCCEEEEEeCHHhcC--------
Confidence             689999999997643  5577889999999999999999988764320        247999999988876        


Q ss_pred             ccCCCCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcc-cCCcccC
Q 025509          155 DKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAI-ATNIIRH  211 (251)
Q Consensus       155 ~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v-~t~~~~~  211 (251)
                             +.++...|+++|+++++|++.+    ...|  +++++|+||++ .|+|...
T Consensus       397 -------g~~g~~~YaaaKa~ld~la~~~----~~~g--i~v~sv~pG~~~~tgm~~~  441 (511)
T 2z5l_A          397 -------GNAGQGAYAAANAALDALAERR----RAAG--LPATSVAWGLWGGGGMAAG  441 (511)
T ss_dssp             -------CCTTBHHHHHHHHHHHHHHHHH----HTTT--CCCEEEEECCBCSTTCCCC
T ss_pred             -------CCCCCHHHHHHHHHHHHHHHHH----HHcC--CcEEEEECCcccCCccccc
Confidence                   6678889999999999888754    4567  89999999999 7887654

>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=99.90  E-value=7e-23  Score=176.38  Aligned_cols=183  Identities=17%  Similarity=0.112  Sum_probs=141.6

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      |+||||||+|+||++++++|+++|++|++++|+.....+..+.+.+.. +..+.++.+|++|.+++.+++++     +++
T Consensus         6 ~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~Dl~d~~~~~~~~~~-----~~~   79 (341)
T 3enk_A            6 GTILVTGGAGYIGSHTAVELLAHGYDVVIADNLVNSKREAIARIEKIT-GKTPAFHETDVSDERALARIFDA-----HPI   79 (341)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEECCCSSSCTHHHHHHHHHH-SCCCEEECCCTTCHHHHHHHHHH-----SCC
T ss_pred             cEEEEecCCcHHHHHHHHHHHHCCCcEEEEecCCcchHHHHHHHHhhc-CCCceEEEeecCCHHHHHHHHhc-----cCC
Confidence            589999999999999999999999999999998776666655554432 45689999999999999998886     479


Q ss_pred             eEEEEcCCCCCCCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccccCCCC
Q 025509           81 NILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDP  160 (251)
Q Consensus        81 d~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~  160 (251)
                      |+||||||....  ....++.++.+++|+.++..+++++    ++.     +.++||++||.+... .....+   +++.
T Consensus        80 d~vih~A~~~~~--~~~~~~~~~~~~~n~~~~~~l~~~~----~~~-----~~~~iv~~SS~~~~g-~~~~~~---~~e~  144 (341)
T 3enk_A           80 TAAIHFAALKAV--GESVAKPIEYYRNNLDSLLSLLRVM----RER-----AVKRIVFSSSATVYG-VPERSP---IDET  144 (341)
T ss_dssp             CEEEECCCCCCH--HHHHHCHHHHHHHHHHHHHHHHHHH----HHT-----TCCEEEEEEEGGGBC-SCSSSS---BCTT
T ss_pred             cEEEECcccccc--CccccChHHHHHHHHHHHHHHHHHH----HhC-----CCCEEEEEecceEec-CCCCCC---CCCC
Confidence            999999997432  1233456678999999998877654    332     357999999976542 222222   3333


Q ss_pred             CCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCc
Q 025509          161 SGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNI  208 (251)
Q Consensus       161 ~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~  208 (251)
                      .+......|+.+|.+.+.+++.++.++.  |  ++++.+.|+.+.+|.
T Consensus       145 ~~~~~~~~Y~~sK~~~e~~~~~~~~~~~--~--~~~~~lRp~~v~G~~  188 (341)
T 3enk_A          145 FPLSATNPYGQTKLMAEQILRDVEAADP--S--WRVATLRYFNPVGAH  188 (341)
T ss_dssp             SCCBCSSHHHHHHHHHHHHHHHHHHHCT--T--CEEEEEEECEEECCC
T ss_pred             CCCCCCChhHHHHHHHHHHHHHHhhcCC--C--ceEEEEeeccccCCc
Confidence            4555667999999999999999998875  4  788889999998874

>1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2

Probab=99.90  E-value=1.6e-22  Score=174.31  Aligned_cols=186  Identities=16%  Similarity=0.143  Sum_probs=141.9

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCc-hhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCC
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDI-AAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQ   79 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~-~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~   79 (251)
                      |+||||||+|+||++++++|+++|++|++++|+. .......+.+.+   ..++.++.+|+++.+++.++++..     +
T Consensus         2 ~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~l~~---~~~~~~~~~Dl~d~~~~~~~~~~~-----~   73 (347)
T 1orr_A            2 AKLLITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNLHWLSS---LGNFEFVHGDIRNKNDVTRLITKY-----M   73 (347)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSTTHHHHHHHHHT---TCCCEEEECCTTCHHHHHHHHHHH-----C
T ss_pred             cEEEEeCCCchhHHHHHHHHHhCCCEEEEEeCCCccCchhhhhhhcc---CCceEEEEcCCCCHHHHHHHHhcc-----C
Confidence            5899999999999999999999999999999853 233333333432   235889999999999999988762     6


Q ss_pred             eeEEEEcCCCCCCCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccc----
Q 025509           80 LNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFD----  155 (251)
Q Consensus        80 id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~----  155 (251)
                      +|+||||||....  +.+.++++..+++|+.++..+++++.+...        .++||++||.+.... ..+.++.    
T Consensus        74 ~d~vih~A~~~~~--~~~~~~~~~~~~~nv~~~~~l~~a~~~~~~--------~~~iv~~SS~~v~g~-~~~~~~~e~~~  142 (347)
T 1orr_A           74 PDSCFHLAGQVAM--TTSIDNPCMDFEINVGGTLNLLEAVRQYNS--------NCNIIYSSTNKVYGD-LEQYKYNETET  142 (347)
T ss_dssp             CSEEEECCCCCCH--HHHHHCHHHHHHHHHHHHHHHHHHHHHHCT--------TCEEEEEEEGGGGTT-CTTSCEEECSS
T ss_pred             CCEEEECCcccCh--hhhhhCHHHHHHHHHHHHHHHHHHHHHhCC--------CceEEEeccHHHhCC-CCcCCcccccc
Confidence            9999999996331  234567889999999999999999887642        259999999765432 1111110    


Q ss_pred             ---------cCCCCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCccc
Q 025509          156 ---------KINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIR  210 (251)
Q Consensus       156 ---------~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~  210 (251)
                               .+++..+..+...|+.+|++.+.+++.++.++   |  ++++.|.||.+.++...
T Consensus       143 ~~~~~~~~~~~~e~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---g--i~~~ilrp~~v~g~~~~  201 (347)
T 1orr_A          143 RYTCVDKPNGYDESTQLDFHSPYGCSKGAADQYMLDYARIF---G--LNTVVFRHSSMYGGRQF  201 (347)
T ss_dssp             CEEETTCTTCBCTTSCCCCCHHHHHHHHHHHHHHHHHHHHH---C--CEEEEEEECCEECTTCC
T ss_pred             cccccccccCccccCCCCCCCchHHHHHHHHHHHHHHHHHh---C--CcEEEEccCceeCcCCC
Confidence                     12233344566789999999999999999886   5  89999999999999754

>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}

Probab=99.90  E-value=5.9e-23  Score=168.31  Aligned_cols=157  Identities=18%  Similarity=0.219  Sum_probs=124.6

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCce-EEEEecCCCHHHHHHHHHHHHhcCCC
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKV-DAMELDLSSLASVRNFASEYNIQHHQ   79 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v-~~~~~D~~~~~~i~~~~~~~~~~~g~   79 (251)
                      |+||||||+|+||++++++|+++|++|++++|++++.++...        ..+ .++.+|++         +.+.+.+++
T Consensus        22 ~~ilVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~~~--------~~~~~~~~~Dl~---------~~~~~~~~~   84 (236)
T 3e8x_A           22 MRVLVVGANGKVARYLLSELKNKGHEPVAMVRNEEQGPELRE--------RGASDIVVANLE---------EDFSHAFAS   84 (236)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHH--------TTCSEEEECCTT---------SCCGGGGTT
T ss_pred             CeEEEECCCChHHHHHHHHHHhCCCeEEEEECChHHHHHHHh--------CCCceEEEcccH---------HHHHHHHcC
Confidence            689999999999999999999999999999999887665432        257 89999998         233445568


Q ss_pred             eeEEEEcCCCCCCCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccccCCC
Q 025509           80 LNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKIND  159 (251)
Q Consensus        80 id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~  159 (251)
                      +|+||||||...      .++++..+++|+.++..+++++.+.         +.++||++||.++....           
T Consensus        85 ~D~vi~~ag~~~------~~~~~~~~~~n~~~~~~l~~a~~~~---------~~~~iv~~SS~~~~~~~-----------  138 (236)
T 3e8x_A           85 IDAVVFAAGSGP------HTGADKTILIDLWGAIKTIQEAEKR---------GIKRFIMVSSVGTVDPD-----------  138 (236)
T ss_dssp             CSEEEECCCCCT------TSCHHHHHHTTTHHHHHHHHHHHHH---------TCCEEEEECCTTCSCGG-----------
T ss_pred             CCEEEECCCCCC------CCCccccchhhHHHHHHHHHHHHHc---------CCCEEEEEecCCCCCCC-----------
Confidence            999999999643      3568999999999999999887432         35799999996544310           


Q ss_pred             CCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCccc
Q 025509          160 PSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIR  210 (251)
Q Consensus       160 ~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~  210 (251)
                       ..++....|+.+|++++.+.+       ..|  ++++.|+||++.++...
T Consensus       139 -~~~~~~~~Y~~sK~~~e~~~~-------~~g--i~~~~lrpg~v~~~~~~  179 (236)
T 3e8x_A          139 -QGPMNMRHYLVAKRLADDELK-------RSS--LDYTIVRPGPLSNEEST  179 (236)
T ss_dssp             -GSCGGGHHHHHHHHHHHHHHH-------HSS--SEEEEEEECSEECSCCC
T ss_pred             -CChhhhhhHHHHHHHHHHHHH-------HCC--CCEEEEeCCcccCCCCC
Confidence             011456799999999988765       456  99999999999998754

>4ggo_A Trans-2-enoyl-COA reductase; rossmann fold, oxidoreductase; 2.00A {Treponema denticola atcc 35405} PDB: 4ggp_A

Probab=99.90  E-value=7.2e-23  Score=176.52  Aligned_cols=189  Identities=11%  Similarity=0.010  Sum_probs=143.3

Q ss_pred             CEEEEECCCChhHHHHHHHHH-HcCCEEEEEecCchh------------HHHHHHHHHhhCCCCceEEEEecCCCHHHHH
Q 025509            1 MDIVITGATSGIGTETARVLA-LRGVHVVMGVRDIAA------------GKDVKETIVKEIPSAKVDAMELDLSSLASVR   67 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~-~~G~~Vi~~~r~~~~------------~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~   67 (251)
                      |++||||||+|||+|.+..|+ ..|++|+++.+..+.            .....+.+++.  +.....+.||+++.++++
T Consensus        51 K~vLVtGaSsGiGlA~AialAf~~GA~vi~v~~~~~~~~~~~atag~~~~~a~~~~i~~~--G~~a~~i~~Dv~d~e~i~  128 (401)
T 4ggo_A           51 KNVLVLGCSNGYGLASRITAAFGYGAATIGVSFEKAGSETKYGTPGWYNNLAFDEAAKRE--GLYSVTIDGDAFSDEIKA  128 (401)
T ss_dssp             CEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHH--TCCEEEEESCTTSHHHHH
T ss_pred             CEEEEECCCCcHHHHHHHHHHhhCCCCEEEEecCCcccccccccccchhHHHHHHHHHHc--CCCceeEeCCCCCHHHHH
Confidence            789999999999999999999 679999999876432            22334445555  678999999999999999


Q ss_pred             HHHHHHHhcCCCeeEEEEcCCCCCC--CC---------------------c-------------CCchhhHHHHH---HH
Q 025509           68 NFASEYNIQHHQLNILINNAGIMGT--PF---------------------M-------------LSKDNIELQFA---TN  108 (251)
Q Consensus        68 ~~~~~~~~~~g~id~lv~~ag~~~~--~~---------------------~-------------~~~~~~~~~~~---~n  108 (251)
                      ++++++++.+|+||+||||++....  +.                     +             .+.++++....   .+
T Consensus       129 ~vi~~i~~~~G~IDiLVhS~A~~~r~~p~~g~~~~S~LKpi~~~~~~~~ldt~~~~i~~~~l~pat~eeie~T~~vMg~s  208 (401)
T 4ggo_A          129 QVIEEAKKKGIKFDLIVYSLASPVRTDPDTGIMHKSVLKPFGKTFTGKTVDPFTGELKEISAEPANDEEAAATVKVMGGE  208 (401)
T ss_dssp             HHHHHHHHTTCCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEECTTTCCEEEEEECCCCHHHHHHHHHHHSSH
T ss_pred             HHHHHHHHhcCCCCEEEEecccccccCCCCCceeeeeecccccccccccccccccccccccccCCcHHHHHHHHHHHhhh
Confidence            9999999999999999999996411  00                     0             12334444443   34


Q ss_pred             HHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccccCCCCCCCCc--ccccchhHHHHHHHHHHHHHH
Q 025509          109 HLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNG--FRAYSQSKLANILHANELARR  186 (251)
Q Consensus       109 ~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~--~~~Y~~sK~a~~~~~~~la~e  186 (251)
                      ..+.+...+...+.|.       .+++++.+|+.++..               .+|.  ...++.+|++++..++.|+.+
T Consensus       209 ~~s~w~~al~~a~lla-------~G~siva~SYiGse~---------------t~P~Y~~G~mG~AKaaLEa~~r~La~e  266 (401)
T 4ggo_A          209 DWERWIKQLSKEGLLE-------EGCITLAYSYIGPEA---------------TQALYRKGTIGKAKEHLEATAHRLNKE  266 (401)
T ss_dssp             HHHHHHHHHHHTTCEE-------EEEEEEEEECCCCGG---------------GHHHHTTSHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHhhhccc-------CCceEEEEeccCcce---------------eecCCCccHHHHHHHHHHHHHHHHHHh
Confidence            4444555555555553       368999999977654               3443  347899999999999999999


Q ss_pred             hccCCCcEEEEEeeCCcccCCcccCCcchhh
Q 025509          187 LKEDGVDITANSVHPGAIATNIIRHNSLFRS  217 (251)
Q Consensus       187 ~~~~g~~i~v~~v~Pg~v~t~~~~~~~~~~~  217 (251)
                      +++    +++++++||.+.|......+-.+.
T Consensus       267 L~~----~~a~v~v~~a~vT~AssaIP~~pl  293 (401)
T 4ggo_A          267 NPS----IRAFVSVNKGLVTRASAVIPVIPL  293 (401)
T ss_dssp             CTT----EEEEEEECCCCCCTTGGGSSSHHH
T ss_pred             cCC----CcEEEEEcCccccchhhcCCCchH
Confidence            985    899999999999999887764443

>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A

Probab=99.90  E-value=5.3e-23  Score=176.85  Aligned_cols=187  Identities=16%  Similarity=0.114  Sum_probs=141.5

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEE-EecCCCHHHHHHHHHHHHhcCCC
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAM-ELDLSSLASVRNFASEYNIQHHQ   79 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~-~~D~~~~~~i~~~~~~~~~~~g~   79 (251)
                      |+||||||+|+||++++++|+++|++|++++|+..+.+.+.+.+.+.. +..+.++ .+|+++.+++.++++       +
T Consensus        12 ~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~~D~~d~~~~~~~~~-------~   83 (342)
T 1y1p_A           12 SLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKY-PGRFETAVVEDMLKQGAYDEVIK-------G   83 (342)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHS-TTTEEEEECSCTTSTTTTTTTTT-------T
T ss_pred             CEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCcccHHHHHHHhhccC-CCceEEEEecCCcChHHHHHHHc-------C
Confidence            579999999999999999999999999999999877666655554433 2468888 799999887766543       6


Q ss_pred             eeEEEEcCCCCCCCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccC---Cccccc
Q 025509           80 LNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHE---GIRFDK  156 (251)
Q Consensus        80 id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~---~~~~~~  156 (251)
                      +|+||||||....     .+++++.+++|+.++..+++++.+.   .     +.++||++||.++......   +.++++
T Consensus        84 ~d~vih~A~~~~~-----~~~~~~~~~~n~~g~~~ll~~~~~~---~-----~~~~iv~~SS~~~~~~~~~~~~~~~~~E  150 (342)
T 1y1p_A           84 AAGVAHIASVVSF-----SNKYDEVVTPAIGGTLNALRAAAAT---P-----SVKRFVLTSSTVSALIPKPNVEGIYLDE  150 (342)
T ss_dssp             CSEEEECCCCCSC-----CSCHHHHHHHHHHHHHHHHHHHHTC---T-----TCCEEEEECCGGGTCCCCTTCCCCEECT
T ss_pred             CCEEEEeCCCCCC-----CCCHHHHHHHHHHHHHHHHHHHHhC---C-----CCcEEEEeccHHHhcCCCCCCCCcccCc
Confidence            8999999996432     1357889999999999999987652   1     2479999999876532111   112221


Q ss_pred             CCC-------------CCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccC
Q 025509          157 IND-------------PSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  211 (251)
Q Consensus       157 ~~~-------------~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  211 (251)
                      -..             ..+..+...|+.+|++.+.+++.++.++.. +  ++++.+.||.+.++....
T Consensus       151 ~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~-~--~~~~~~rp~~v~g~~~~~  215 (342)
T 1y1p_A          151 KSWNLESIDKAKTLPESDPQKSLWVYAASKTEAELAAWKFMDENKP-H--FTLNAVLPNYTIGTIFDP  215 (342)
T ss_dssp             TCCCHHHHHHHHHSCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHCC-S--SEEEEEEESEEECCCSCT
T ss_pred             cccCchhhhhhccccccccccchHHHHHHHHHHHHHHHHHHHhcCC-C--ceEEEEcCCceECCCCCC
Confidence            110             001234568999999999999999999875 6  899999999999998654

>2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A*

Probab=99.90  E-value=6.8e-23  Score=177.43  Aligned_cols=166  Identities=17%  Similarity=0.161  Sum_probs=137.4

Q ss_pred             CEEEEECCCChhHHHHHHHHHHc-CC-EEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCC
Q 025509            1 MDIVITGATSGIGTETARVLALR-GV-HVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHH   78 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~-G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g   78 (251)
                      |+||||||+|+||++++++|+++ |+ +|++++|++.+..++.+.+.    ...+.++.+|++|.+++.++++       
T Consensus        22 k~vlVTGatG~iG~~l~~~L~~~~g~~~V~~~~r~~~~~~~~~~~~~----~~~v~~~~~Dl~d~~~l~~~~~-------   90 (344)
T 2gn4_A           22 QTILITGGTGSFGKCFVRKVLDTTNAKKIIVYSRDELKQSEMAMEFN----DPRMRFFIGDVRDLERLNYALE-------   90 (344)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHCCCSEEEEEESCHHHHHHHHHHHC----CTTEEEEECCTTCHHHHHHHTT-------
T ss_pred             CEEEEECCCcHHHHHHHHHHHhhCCCCEEEEEECChhhHHHHHHHhc----CCCEEEEECCCCCHHHHHHHHh-------
Confidence            58999999999999999999999 98 99999999877666655442    3578999999999998887664       


Q ss_pred             CeeEEEEcCCCCCCCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccccCC
Q 025509           79 QLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKIN  158 (251)
Q Consensus        79 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~  158 (251)
                      ++|+|||+||.....  ....+..+.+++|+.++.++++++.+.         +.++||++||..+..            
T Consensus        91 ~~D~Vih~Aa~~~~~--~~~~~~~~~~~~Nv~gt~~l~~aa~~~---------~v~~~V~~SS~~~~~------------  147 (344)
T 2gn4_A           91 GVDICIHAAALKHVP--IAEYNPLECIKTNIMGASNVINACLKN---------AISQVIALSTDKAAN------------  147 (344)
T ss_dssp             TCSEEEECCCCCCHH--HHHHSHHHHHHHHHHHHHHHHHHHHHT---------TCSEEEEECCGGGSS------------
T ss_pred             cCCEEEECCCCCCCC--chhcCHHHHHHHHHHHHHHHHHHHHhC---------CCCEEEEecCCccCC------------
Confidence            689999999965321  123456789999999999999998765         246999999965432            


Q ss_pred             CCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCc
Q 025509          159 DPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNI  208 (251)
Q Consensus       159 ~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~  208 (251)
                            +...|+.+|++++.++++++.++.+.|  +++++|.||.+.++.
T Consensus       148 ------p~~~Y~~sK~~~E~~~~~~~~~~~~~g--~~~~~vRpg~v~g~~  189 (344)
T 2gn4_A          148 ------PINLYGATKLCSDKLFVSANNFKGSSQ--TQFSVVRYGNVVGSR  189 (344)
T ss_dssp             ------CCSHHHHHHHHHHHHHHHGGGCCCSSC--CEEEEECCCEETTCT
T ss_pred             ------CccHHHHHHHHHHHHHHHHHHHhCCCC--cEEEEEEeccEECCC
Confidence                  346899999999999999999888778  999999999999875

>1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A*

Probab=99.90  E-value=1.6e-22  Score=175.30  Aligned_cols=186  Identities=17%  Similarity=0.118  Sum_probs=143.7

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      |+||||||+|+||++++++|+++|++|++++|+........+.+.   ....+.++.+|+++.+++.++++..     ++
T Consensus        10 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~---~~~~~~~~~~Dl~d~~~~~~~~~~~-----~~   81 (357)
T 1rkx_A           10 KRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETAR---VADGMQSEIGDIRDQNKLLESIREF-----QP   81 (357)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCSSSSCHHHHTT---TTTTSEEEECCTTCHHHHHHHHHHH-----CC
T ss_pred             CEEEEECCCchHHHHHHHHHHhCCCeEEEEeCCCcccchhhHhhc---cCCceEEEEccccCHHHHHHHHHhc-----CC
Confidence            579999999999999999999999999999998765444333221   1346889999999999999988865     69


Q ss_pred             eEEEEcCCCCCCCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccccCCCC
Q 025509           81 NILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDP  160 (251)
Q Consensus        81 d~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~  160 (251)
                      |+||||||...  ...+.++++..+++|+.++..+++++.+.  .      ..++||++||.+.........+   +.+.
T Consensus        82 d~vih~A~~~~--~~~~~~~~~~~~~~n~~~~~~l~~a~~~~--~------~~~~~v~~SS~~vyg~~~~~~~---~~E~  148 (357)
T 1rkx_A           82 EIVFHMAAQPL--VRLSYSEPVETYSTNVMGTVYLLEAIRHV--G------GVKAVVNITSDKCYDNKEWIWG---YREN  148 (357)
T ss_dssp             SEEEECCSCCC--HHHHHHCHHHHHHHHTHHHHHHHHHHHHH--C------CCCEEEEECCGGGBCCCCSSSC---BCTT
T ss_pred             CEEEECCCCcc--cccchhCHHHHHHHHHHHHHHHHHHHHHh--C------CCCeEEEecCHHHhCCCCcCCC---CCCC
Confidence            99999999522  22345678899999999999999998653  1      2469999999765432111111   2222


Q ss_pred             CCCCcccccchhHHHHHHHHHHHHHHhc------cCCCcEEEEEeeCCcccCCcc
Q 025509          161 SGYNGFRAYSQSKLANILHANELARRLK------EDGVDITANSVHPGAIATNII  209 (251)
Q Consensus       161 ~~~~~~~~Y~~sK~a~~~~~~~la~e~~------~~g~~i~v~~v~Pg~v~t~~~  209 (251)
                      .+..+...|+.+|.+.+.+++.++.++.      +.|  ++++.+.||.+.+|..
T Consensus       149 ~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~g--i~~~~lrp~~v~G~~~  201 (357)
T 1rkx_A          149 EAMGGYDPYSNSKGCAELVTSSYRNSFFNPANYGQHG--TAVATVRAGNVIGGGD  201 (357)
T ss_dssp             SCBCCSSHHHHHHHHHHHHHHHHHHHHSCGGGHHHHC--CEEEEEECCCEECTTC
T ss_pred             CCCCCCCccHHHHHHHHHHHHHHHHHHhhhhccccCC--ceEEEEeeceeeCCCC
Confidence            3445567899999999999999999884      346  8999999999999864

>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A*

Probab=99.89  E-value=1.7e-22  Score=173.90  Aligned_cols=185  Identities=16%  Similarity=0.083  Sum_probs=138.9

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      |+||||||+|+||++++++|+++|++|++++|+......  +.+.+......+.++.+|++|.+++.++++..     ++
T Consensus         4 ~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~--~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~-----~~   76 (345)
T 2z1m_A            4 KRALITGIRGQDGAYLAKLLLEKGYEVYGADRRSGEFAS--WRLKELGIENDVKIIHMDLLEFSNIIRTIEKV-----QP   76 (345)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCCSTTTT--HHHHHTTCTTTEEECCCCTTCHHHHHHHHHHH-----CC
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEECCCccccc--ccHhhccccCceeEEECCCCCHHHHHHHHHhc-----CC
Confidence            579999999999999999999999999999998765321  11222212346889999999999999988876     68


Q ss_pred             eEEEEcCCCCCCCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccccCCCC
Q 025509           81 NILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDP  160 (251)
Q Consensus        81 d~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~  160 (251)
                      |+||||||...  .+.+.++++..+++|+.++..+++++.+.  .      ..++||++||.+.... ..+.+   +++.
T Consensus        77 d~vih~A~~~~--~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~--~------~~~~iv~~SS~~vyg~-~~~~~---~~e~  142 (345)
T 2z1m_A           77 DEVYNLAAQSF--VGVSFEQPILTAEVDAIGVLRILEALRTV--K------PDTKFYQASTSEMFGK-VQEIP---QTEK  142 (345)
T ss_dssp             SEEEECCCCCC--HHHHTTSHHHHHHHHTHHHHHHHHHHHHH--C------TTCEEEEEEEGGGGCS-CSSSS---BCTT
T ss_pred             CEEEECCCCcc--hhhhhhCHHHHHHHHHHHHHHHHHHHHHh--C------CCceEEEEechhhcCC-CCCCC---CCcc
Confidence            99999999643  22345678999999999999999998753  1      1369999999765321 11212   2233


Q ss_pred             CCCCcccccchhHHHHHHHHHHHHHHhc---cCCCcEEEEEeeCCcccCCc
Q 025509          161 SGYNGFRAYSQSKLANILHANELARRLK---EDGVDITANSVHPGAIATNI  208 (251)
Q Consensus       161 ~~~~~~~~Y~~sK~a~~~~~~~la~e~~---~~g~~i~v~~v~Pg~v~t~~  208 (251)
                      .+..+...|+.+|++.+.+++.++.+++   ..+  +.++.+.||...|.+
T Consensus       143 ~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~--r~~~~~gpg~~~~~~  191 (345)
T 2z1m_A          143 TPFYPRSPYAVAKLFGHWITVNYREAYNMFACSG--ILFNHESPLRGIEFV  191 (345)
T ss_dssp             SCCCCCSHHHHHHHHHHHHHHHHHHHHCCCEEEE--EECCEECTTSCTTSH
T ss_pred             CCCCCCChhHHHHHHHHHHHHHHHHHhCCceEee--eeeeecCCCCCCcch
Confidence            3455667899999999999999999875   223  566777888776654

>2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus}

Probab=99.89  E-value=3.9e-22  Score=170.30  Aligned_cols=176  Identities=19%  Similarity=0.152  Sum_probs=139.0

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      |+||||||+|+||++++++|+++|++|++++|+... ..    +       .+.++.+|++|.+++.++++.     +++
T Consensus        13 ~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~-~~----l-------~~~~~~~Dl~d~~~~~~~~~~-----~~~   75 (321)
T 2pk3_A           13 MRALITGVAGFVGKYLANHLTEQNVEVFGTSRNNEA-KL----P-------NVEMISLDIMDSQRVKKVISD-----IKP   75 (321)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCTTC-CC----T-------TEEEEECCTTCHHHHHHHHHH-----HCC
T ss_pred             ceEEEECCCChHHHHHHHHHHHCCCEEEEEecCCcc-cc----c-------eeeEEECCCCCHHHHHHHHHh-----cCC
Confidence            579999999999999999999999999999998653 11    1       578899999999999988875     379


Q ss_pred             eEEEEcCCCCCCCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCcccccccc-CCcccccCCC
Q 025509           81 NILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYH-EGIRFDKIND  159 (251)
Q Consensus        81 d~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~-~~~~~~~~~~  159 (251)
                      |+||||||....  ..+.++++..+++|+.++..+++++ +.+.       +.++||++||.+...... ...   ++++
T Consensus        76 d~vih~A~~~~~--~~~~~~~~~~~~~Nv~g~~~l~~a~-~~~~-------~~~~iv~~SS~~v~g~~~~~~~---~~~E  142 (321)
T 2pk3_A           76 DYIFHLAAKSSV--KDSWLNKKGTFSTNVFGTLHVLDAV-RDSN-------LDCRILTIGSSEEYGMILPEES---PVSE  142 (321)
T ss_dssp             SEEEECCSCCCH--HHHTTCHHHHHHHHHHHHHHHHHHH-HHHT-------CCCEEEEEEEGGGTBSCCGGGC---SBCT
T ss_pred             CEEEEcCcccch--hhhhhcHHHHHHHHHHHHHHHHHHH-HHhC-------CCCeEEEEccHHhcCCCCCCCC---CCCC
Confidence            999999996432  2344578899999999999999998 4441       257999999986543210 111   2333


Q ss_pred             CCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccC
Q 025509          160 PSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  211 (251)
Q Consensus       160 ~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  211 (251)
                      ..+..+...|+.+|++.+.+++.++.++   |  ++++.+.||.+.+|....
T Consensus       143 ~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---g--i~~~ilrp~~v~g~~~~~  189 (321)
T 2pk3_A          143 ENQLRPMSPYGVSKASVGMLARQYVKAY---G--MDIIHTRTFNHIGPGQSL  189 (321)
T ss_dssp             TSCCBCCSHHHHHHHHHHHHHHHHHHHH---C--CEEEEEEECEEECTTCCT
T ss_pred             CCCCCCCCccHHHHHHHHHHHHHHHHHc---C--CCEEEEEeCcccCcCCCC
Confidence            3445566799999999999999999875   5  899999999999997654

>1kew_A RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fold, lyase; HET: TYD NAD; 1.80A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1g1a_A* 1keu_A* 1bxk_A*

Probab=99.89  E-value=3.7e-22  Score=173.12  Aligned_cols=194  Identities=16%  Similarity=0.117  Sum_probs=142.3

Q ss_pred             CEEEEECCCChhHHHHHHHHHHc-CCEEEEEecCch--hHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcC
Q 025509            1 MDIVITGATSGIGTETARVLALR-GVHVVMGVRDIA--AGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQH   77 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~-G~~Vi~~~r~~~--~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~   77 (251)
                      |+||||||+|+||++++++|++. |++|++++|+..  ..+.+ .++   .....+.++.+|+++.+++.+++++.    
T Consensus         1 MkvlVTGasG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~-~~~---~~~~~~~~~~~Dl~d~~~~~~~~~~~----   72 (361)
T 1kew_A            1 MKILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLESL-SDI---SESNRYNFEHADICDSAEITRIFEQY----   72 (361)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHHCSCEEEEEECCCTTCCGGGG-TTT---TTCTTEEEEECCTTCHHHHHHHHHHH----
T ss_pred             CEEEEECCCchHhHHHHHHHHhcCCCeEEEEecCCCCCchhhh-hhh---hcCCCeEEEECCCCCHHHHHHHHhhc----
Confidence            57999999999999999999998 799999998642  22211 111   11346889999999999999988763    


Q ss_pred             CCeeEEEEcCCCCCCCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccC-C-----
Q 025509           78 HQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHE-G-----  151 (251)
Q Consensus        78 g~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~-~-----  151 (251)
                       ++|+||||||...  .+.+.++++..+++|+.++..+++++.+.|..-....+..++||++||.+....... +     
T Consensus        73 -~~d~vih~A~~~~--~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~v~~~~~~~~~iv~~SS~~v~g~~~~~~~~~~~  149 (361)
T 1kew_A           73 -QPDAVMHLAAESH--VDRSITGPAAFIETNIVGTYALLEVARKYWSALGEDKKNNFRFHHISTDEVYGDLPHPDEVENS  149 (361)
T ss_dssp             -CCSEEEECCSCCC--HHHHHHCTHHHHHHHTHHHHHHHHHHHHHHHTSCHHHHHHCEEEEEEEGGGGCCCCCGGGSCTT
T ss_pred             -CCCEEEECCCCcC--hhhhhhCHHHHHHHHHHHHHHHHHHHHHhccCcccccccCceEEEeCCHHHhCCCccccccccc
Confidence             7999999999643  123456788999999999999999999987531000001259999999754321110 0     


Q ss_pred             cccccCCCCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCccc
Q 025509          152 IRFDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIR  210 (251)
Q Consensus       152 ~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~  210 (251)
                      ..+.++++..+..+...|+.+|++++.+++.++.++   |  ++++.|+||.+.++...
T Consensus       150 ~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---g--i~~~~vrp~~v~G~~~~  203 (361)
T 1kew_A          150 VTLPLFTETTAYAPSSPYSASKASSDHLVRAWRRTY---G--LPTIVTNCSNNYGPYHF  203 (361)
T ss_dssp             SCCCCBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH---C--CCEEEEEECEEESTTCC
T ss_pred             ccCCCCCCCCCCCCCCccHHHHHHHHHHHHHHHHHh---C--CcEEEEeeceeECCCCC
Confidence            011123334455567799999999999999999887   4  88889999999999864

>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A

Probab=99.89  E-value=4.8e-23  Score=169.22  Aligned_cols=155  Identities=16%  Similarity=0.095  Sum_probs=121.7

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCC--EEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCC
Q 025509            1 MDIVITGATSGIGTETARVLALRGV--HVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHH   78 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~--~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g   78 (251)
                      |++|||||+||||++++++|+++|+  +|++++|++.+.++..        ...+.++.+|+++.+++.++++       
T Consensus        19 ~~vlVtGasg~iG~~l~~~L~~~G~~~~V~~~~r~~~~~~~~~--------~~~~~~~~~D~~d~~~~~~~~~-------   83 (242)
T 2bka_A           19 KSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEA--------YKNVNQEVVDFEKLDDYASAFQ-------   83 (242)
T ss_dssp             CEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCSGG--------GGGCEEEECCGGGGGGGGGGGS-------
T ss_pred             CeEEEECCCcHHHHHHHHHHHcCCCCCEEEEEEcCCCCccccc--------cCCceEEecCcCCHHHHHHHhc-------
Confidence            5799999999999999999999999  9999999876533211        1357889999999888776554       


Q ss_pred             CeeEEEEcCCCCCCCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccccCC
Q 025509           79 QLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKIN  158 (251)
Q Consensus        79 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~  158 (251)
                      ++|+||||||...     ..++++..+++|+.++..+++++.    +.     +.++||++||.++..            
T Consensus        84 ~~d~vi~~ag~~~-----~~~~~~~~~~~n~~~~~~~~~~~~----~~-----~~~~iv~~SS~~~~~------------  137 (242)
T 2bka_A           84 GHDVGFCCLGTTR-----GKAGAEGFVRVDRDYVLKSAELAK----AG-----GCKHFNLLSSKGADK------------  137 (242)
T ss_dssp             SCSEEEECCCCCH-----HHHHHHHHHHHHTHHHHHHHHHHH----HT-----TCCEEEEECCTTCCT------------
T ss_pred             CCCEEEECCCccc-----ccCCcccceeeeHHHHHHHHHHHH----HC-----CCCEEEEEccCcCCC------------
Confidence            6999999999632     124568899999999988877643    32     357999999976542            


Q ss_pred             CCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcE-EEEEeeCCcccCCccc
Q 025509          159 DPSGYNGFRAYSQSKLANILHANELARRLKEDGVDI-TANSVHPGAIATNIIR  210 (251)
Q Consensus       159 ~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i-~v~~v~Pg~v~t~~~~  210 (251)
                           +....|+.+|++++.+++.+       +  + +++.|+||++.|++..
T Consensus       138 -----~~~~~Y~~sK~~~e~~~~~~-------~--~~~~~~vrpg~v~~~~~~  176 (242)
T 2bka_A          138 -----SSNFLYLQVKGEVEAKVEEL-------K--FDRYSVFRPGVLLCDRQE  176 (242)
T ss_dssp             -----TCSSHHHHHHHHHHHHHHTT-------C--CSEEEEEECCEEECTTGG
T ss_pred             -----CCcchHHHHHHHHHHHHHhc-------C--CCCeEEEcCceecCCCCC
Confidence                 13357999999999887653       3  5 7889999999999754

>1gy8_A UDP-galactose 4-epimerase; oxidoreductase; HET: NAD UDP; 2.0A {Trypanosoma brucei} SCOP: c.2.1.2 PDB: 2cnb_A*

Probab=99.88  E-value=1.3e-21  Score=171.94  Aligned_cols=187  Identities=15%  Similarity=0.085  Sum_probs=138.1

Q ss_pred             CEEEEECCCChhHHHHHHHHH-HcCCEEEEEecCchh---------HHHHHHHHHhhCC---CCc---eEEEEecCCCHH
Q 025509            1 MDIVITGATSGIGTETARVLA-LRGVHVVMGVRDIAA---------GKDVKETIVKEIP---SAK---VDAMELDLSSLA   64 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~-~~G~~Vi~~~r~~~~---------~~~~~~~~~~~~~---~~~---v~~~~~D~~~~~   64 (251)
                      |+||||||+|+||++++++|+ ++|++|++++|+...         .+.+.+.+.+...   ...   +.++.+|+++.+
T Consensus         3 m~vlVTGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~   82 (397)
T 1gy8_A            3 MRVLVCGGAGYIGSHFVRALLRDTNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKPPWADRYAALEVGDVRNED   82 (397)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHCCCEEEEEECCTTTTTCCTTSCCHHHHHHHHHHSCSSCCTTTTCCCEEEESCTTCHH
T ss_pred             CEEEEECCCCHHHHHHHHHHHHhCCCEEEEEecCCcccccccccchHHHHHHHHHHhhccccccCCceEEEEECCCCCHH
Confidence            579999999999999999999 999999999987544         3333332332211   124   889999999999


Q ss_pred             HHHHHHHHHHhcCCCeeEEEEcCCCCCCCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccc
Q 025509           65 SVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGH  144 (251)
Q Consensus        65 ~i~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~  144 (251)
                      ++.+++++    ++++|+||||||....  ..+.++++..+++|+.++..+++++...         +.++||++||.+.
T Consensus        83 ~~~~~~~~----~~~~d~vih~A~~~~~--~~~~~~~~~~~~~Nv~g~~~ll~a~~~~---------~~~~iv~~SS~~v  147 (397)
T 1gy8_A           83 FLNGVFTR----HGPIDAVVHMCAFLAV--GESVRDPLKYYDNNVVGILRLLQAMLLH---------KCDKIIFSSSAAI  147 (397)
T ss_dssp             HHHHHHHH----SCCCCEEEECCCCCCH--HHHHHCHHHHHHHHHHHHHHHHHHHHHT---------TCCEEEEEEEGGG
T ss_pred             HHHHHHHh----cCCCCEEEECCCccCc--CcchhhHHHHHHHHhHHHHHHHHHHHHh---------CCCEEEEECCHHH
Confidence            98887764    4569999999996432  1134678889999999999999875432         2469999999654


Q ss_pred             cccccCC----cccccCCCCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCc
Q 025509          145 RLAYHEG----IRFDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNI  208 (251)
Q Consensus       145 ~~~~~~~----~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~  208 (251)
                      .. ....    ....++++..+..+...|+.+|++.+.+++.++.++   |  ++++.+.|+.+.++.
T Consensus       148 ~g-~~~~~~~~~~~~~~~E~~~~~p~~~Y~~sK~~~e~~~~~~~~~~---g--i~~~ilRp~~v~G~~  209 (397)
T 1gy8_A          148 FG-NPTMGSVSTNAEPIDINAKKSPESPYGESKLIAERMIRDCAEAY---G--IKGICLRYFNACGAH  209 (397)
T ss_dssp             TB-SCCC-----CCCCBCTTSCCBCSSHHHHHHHHHHHHHHHHHHHH---C--CEEEEEEECEEECCC
T ss_pred             hC-CCCcccccccccCcCccCCCCCCCchHHHHHHHHHHHHHHHHHH---C--CcEEEEeccceeCCC
Confidence            32 2210    001123333344456789999999999999999887   5  899999999998875

>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A*

Probab=99.88  E-value=1.1e-21  Score=169.94  Aligned_cols=184  Identities=15%  Similarity=0.067  Sum_probs=138.2

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCC---CCceEEEEecCCCHHHHHHHHHHHHhcC
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIP---SAKVDAMELDLSSLASVRNFASEYNIQH   77 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~---~~~v~~~~~D~~~~~~i~~~~~~~~~~~   77 (251)
                      |+||||||+|+||++++++|+++|++|++++|+.....+..+.+.+...   ...+.++.+|+++.+++.++++      
T Consensus        28 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~------  101 (352)
T 1sb8_A           28 KVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQGDIRNLDDCNNACA------  101 (352)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHSCHHHHTTEEEEECCTTSHHHHHHHHT------
T ss_pred             CeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCccchhhHHHHhhhcccccCCceEEEECCCCCHHHHHHHhc------
Confidence            5799999999999999999999999999999975422222222222211   2468899999999998887765      


Q ss_pred             CCeeEEEEcCCCCCCCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccccC
Q 025509           78 HQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKI  157 (251)
Q Consensus        78 g~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~  157 (251)
                       ++|+|||+||....  ..+.++++..+++|+.++..+++++.+.         +.++||++||.+..... .+.+   +
T Consensus       102 -~~d~vih~A~~~~~--~~~~~~~~~~~~~n~~~~~~l~~a~~~~---------~~~~~v~~SS~~~~~~~-~~~~---~  165 (352)
T 1sb8_A          102 -GVDYVLHQAALGSV--PRSINDPITSNATNIDGFLNMLIAARDA---------KVQSFTYAASSSTYGDH-PGLP---K  165 (352)
T ss_dssp             -TCSEEEECCSCCCH--HHHHHCHHHHHHHHTHHHHHHHHHHHHT---------TCSEEEEEEEGGGGTTC-CCSS---B
T ss_pred             -CCCEEEECCcccCc--hhhhhCHHHHHHHHHHHHHHHHHHHHHc---------CCCEEEEeccHHhcCCC-CCCC---C
Confidence             68999999996432  1234678889999999999999988653         24699999998764322 1122   2


Q ss_pred             CCCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccC
Q 025509          158 NDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  211 (251)
Q Consensus       158 ~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  211 (251)
                      ++..+..+...|+.+|.+.+.+++.++.++   |  ++++.+.||.+.++....
T Consensus       166 ~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---g--~~~~ilRp~~v~G~~~~~  214 (352)
T 1sb8_A          166 VEDTIGKPLSPYAVTKYVNELYADVFSRCY---G--FSTIGLRYFNVFGRRQDP  214 (352)
T ss_dssp             CTTCCCCCCSHHHHHHHHHHHHHHHHHHHH---C--CCCEEEEECCEECTTCCC
T ss_pred             CCCCCCCCCChhHHHHHHHHHHHHHHHHHc---C--CCEEEEEECceeCcCCCC
Confidence            233333456789999999999999998876   4  788889999999987653

>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*

Probab=99.88  E-value=1e-22  Score=211.36  Aligned_cols=161  Identities=19%  Similarity=0.129  Sum_probs=126.5

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCE-EEEEecCchhHH---HHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhc
Q 025509            1 MDIVITGATSGIGTETARVLALRGVH-VVMGVRDIAAGK---DVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQ   76 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~-Vi~~~r~~~~~~---~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~   76 (251)
                      |++|||||++|||+++|++|+++|++ |++++|+..+.+   +..+++.+.  +.++.++.+|+++.++++++++++. +
T Consensus      1885 k~~lITGgs~GIG~aia~~la~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~--g~~v~~~~~Dvsd~~~v~~~~~~~~-~ 1961 (2512)
T 2vz8_A         1885 KSYVITGGLGGFGLQLAQWLRLRGAQKLVLTSRSGIRTGYQARQVREWRRQ--GVQVLVSTSNASSLDGARSLITEAT-Q 1961 (2512)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTCCEEEEECSSCCCSHHHHHHHHHHHHT--TCEEEEECCCSSSHHHHHHHHHHHH-H
T ss_pred             CEEEEECCCCCHHHHHHHHHHHCCCCEEEEEeCCCcchHHHHHHHHHHHhC--CCEEEEEecCCCCHHHHHHHHHHHH-h
Confidence            57999999999999999999999996 888999865543   334444333  5678999999999999999999986 4


Q ss_pred             CCCeeEEEEcCCCCC--CCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCccc
Q 025509           77 HHQLNILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRF  154 (251)
Q Consensus        77 ~g~id~lv~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~  154 (251)
                      +|++|+||||||+..  ++.+++.++|++++++|+.|++++.+++.+.+.+       .++||++||.++..        
T Consensus      1962 ~g~id~lVnnAgv~~~~~~~~~t~e~~~~~~~~nv~g~~~l~~~~~~~~~~-------~g~iV~iSS~ag~~-------- 2026 (2512)
T 2vz8_A         1962 LGPVGGVFNLAMVLRDAVLENQTPEFFQDVSKPKYSGTANLDRVTREACPE-------LDYFVIFSSVSCGR-------- 2026 (2512)
T ss_dssp             HSCEEEEEECCCC----------------CTTTTHHHHHHHHHHHHHHCTT-------CCEEEEECCHHHHT--------
T ss_pred             cCCCcEEEECCCcCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHHHhccc-------CCEEEEecchhhcC--------
Confidence            789999999999753  3678899999999999999999999999888754       37999999999887        


Q ss_pred             ccCCCCCCCCcccccchhHHHHHHHHHHHHHH
Q 025509          155 DKINDPSGYNGFRAYSQSKLANILHANELARR  186 (251)
Q Consensus       155 ~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e  186 (251)
                             +.+++..|+++|+++++|++.++.+
T Consensus      2027 -------g~~g~~~Y~aaKaal~~l~~~rr~~ 2051 (2512)
T 2vz8_A         2027 -------GNAGQANYGFANSAMERICEKRRHD 2051 (2512)
T ss_dssp             -------TCTTCHHHHHHHHHHHHHHHHHHHT
T ss_pred             -------CCCCcHHHHHHHHHHHHHHHHHHHC
Confidence                   6778899999999999999976654

>1i24_A Sulfolipid biosynthesis protein SQD1; SDR, short-chain dehydrogenase/reductase, rossmann fold, BIO protein; HET: NAD UPG; 1.20A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1i2c_A* 1i2b_A* 1qrr_A*

Probab=99.88  E-value=2.9e-21  Score=169.89  Aligned_cols=188  Identities=12%  Similarity=0.105  Sum_probs=136.4

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHH----------------HHHHHHhhCCCCceEEEEecCCCHH
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKD----------------VKETIVKEIPSAKVDAMELDLSSLA   64 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~----------------~~~~~~~~~~~~~v~~~~~D~~~~~   64 (251)
                      ++||||||+|+||++++++|+++|++|++++|+.....+                ....+.+.. +..+.++.+|+++.+
T Consensus        12 ~~vlVTG~tGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~-~~~v~~~~~Dl~d~~   90 (404)
T 1i24_A           12 SRVMVIGGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKALT-GKSIELYVGDICDFE   90 (404)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHHHHHH-CCCCEEEESCTTSHH
T ss_pred             CeEEEeCCCcHHHHHHHHHHHhCCCeEEEEEecCccccccccccccccccchhhhhhhhHhhcc-CCceEEEECCCCCHH
Confidence            479999999999999999999999999999986433211                111111111 356889999999999


Q ss_pred             HHHHHHHHHHhcCCCeeEEEEcCCCCCCC-CcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCcc
Q 025509           65 SVRNFASEYNIQHHQLNILINNAGIMGTP-FMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEG  143 (251)
Q Consensus        65 ~i~~~~~~~~~~~g~id~lv~~ag~~~~~-~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~  143 (251)
                      ++.++++..     ++|+||||||..... ...+++++...+++|+.++..+++++.+..        ...+||++||.+
T Consensus        91 ~~~~~~~~~-----~~D~Vih~A~~~~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~--------~~~~~V~~SS~~  157 (404)
T 1i24_A           91 FLAESFKSF-----EPDSVVHFGEQRSAPYSMIDRSRAVYTQHNNVIGTLNVLFAIKEFG--------EECHLVKLGTMG  157 (404)
T ss_dssp             HHHHHHHHH-----CCSEEEECCSCCCHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHHC--------TTCEEEEECCGG
T ss_pred             HHHHHHhcc-----CCCEEEECCCCCCccchhhCccchhhhHHHHHHHHHHHHHHHHHhC--------CCcEEEEeCcHH
Confidence            999988865     699999999965421 122455567789999999999999886541        124999999975


Q ss_pred             ccccccCCcccccC-----------CCCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcc
Q 025509          144 HRLAYHEGIRFDKI-----------NDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNII  209 (251)
Q Consensus       144 ~~~~~~~~~~~~~~-----------~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~  209 (251)
                      .... .. .++.+-           ..+.+..+...|+.+|++.+.+++.++.++   |  ++++.|.||.|.+|..
T Consensus       158 vyg~-~~-~~~~E~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---g--i~~~ivrp~~v~Gp~~  227 (404)
T 1i24_A          158 EYGT-PN-IDIEEGYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAW---G--IRATDLNQGVVYGVKT  227 (404)
T ss_dssp             GGCC-CS-SCBCSSEEEEEETTEEEEEECCCCCCSHHHHHHHHHHHHHHHHHHHH---C--CEEEEEEECEEECSCC
T ss_pred             HhCC-CC-CCCCccccccccccccccccCCCCCCChhHHHHHHHHHHHHHHHHhc---C--CeEEEEecceeeCCCC
Confidence            4421 11 111110           000133455689999999999999998877   5  8999999999999865

>2hun_A 336AA long hypothetical DTDP-glucose 4,6-dehydrat; rossmann fold, structural genomics, NPPSFA; HET: NAD; 2.07A {Pyrococcus horikoshii}

Probab=99.87  E-value=1.5e-21  Score=167.61  Aligned_cols=180  Identities=14%  Similarity=0.094  Sum_probs=136.5

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcC--CEEEEEecCch--hHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhc
Q 025509            1 MDIVITGATSGIGTETARVLALRG--VHVVMGVRDIA--AGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQ   76 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G--~~Vi~~~r~~~--~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~   76 (251)
                      |+||||||+|+||++++++|+++|  ++|++++|+..  ..+.+ +.+   .....+.++.+|+++.+++.+++.     
T Consensus         4 m~vlVTGatG~iG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~~-~~~---~~~~~~~~~~~Dl~d~~~~~~~~~-----   74 (336)
T 2hun_A            4 MKLLVTGGMGFIGSNFIRYILEKHPDWEVINIDKLGYGSNPANL-KDL---EDDPRYTFVKGDVADYELVKELVR-----   74 (336)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGG-TTT---TTCTTEEEEECCTTCHHHHHHHHH-----
T ss_pred             CeEEEECCCchHHHHHHHHHHHhCCCCEEEEEecCcccCchhHH-hhh---ccCCceEEEEcCCCCHHHHHHHhh-----
Confidence            579999999999999999999986  89999998642  11111 111   113468899999999999888772     


Q ss_pred             CCCeeEEEEcCCCCCCCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCccccc
Q 025509           77 HHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDK  156 (251)
Q Consensus        77 ~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~  156 (251)
                        ++|+||||||...  .+.+.++++..+++|+.++..+++++.+.  .      ..++||++||.+.... ..+.+   
T Consensus        75 --~~d~vih~A~~~~--~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~--~------~~~~iv~~SS~~vyg~-~~~~~---  138 (336)
T 2hun_A           75 --KVDGVVHLAAESH--VDRSISSPEIFLHSNVIGTYTLLESIRRE--N------PEVRFVHVSTDEVYGD-ILKGS---  138 (336)
T ss_dssp             --TCSEEEECCCCCC--HHHHHHCTHHHHHHHHHHHHHHHHHHHHH--C------TTSEEEEEEEGGGGCC-CSSSC---
T ss_pred             --CCCEEEECCCCcC--hhhhhhCHHHHHHHHHHHHHHHHHHHHHh--C------CCcEEEEeccHHHHCC-CCCCC---
Confidence              7999999999643  12345678889999999999999998876  1      2369999999764321 11112   


Q ss_pred             CCCCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCccc
Q 025509          157 INDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIR  210 (251)
Q Consensus       157 ~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~  210 (251)
                      +++..+..+...|+.+|++.+.+++.++.++   |  ++++.++||.+.++...
T Consensus       139 ~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~--~~~~ilrp~~v~g~~~~  187 (336)
T 2hun_A          139 FTENDRLMPSSPYSATKAASDMLVLGWTRTY---N--LNASITRCTNNYGPYQF  187 (336)
T ss_dssp             BCTTBCCCCCSHHHHHHHHHHHHHHHHHHHT---T--CEEEEEEECEEESTTCC
T ss_pred             cCCCCCCCCCCccHHHHHHHHHHHHHHHHHh---C--CCEEEEeeeeeeCcCCC
Confidence            2233344556789999999999999999876   5  89999999999999864

>3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A*

Probab=99.87  E-value=5.8e-22  Score=168.60  Aligned_cols=174  Identities=20%  Similarity=0.203  Sum_probs=134.8

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      |+||||||+|+||++++++|+++|++|++++|+.....+..        ...+.++.+|+++.+ +.+.++       . 
T Consensus         1 m~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~--------~~~~~~~~~Dl~d~~-~~~~~~-------~-   63 (312)
T 3ko8_A            1 MRIVVTGGAGFIGSHLVDKLVELGYEVVVVDNLSSGRREFV--------NPSAELHVRDLKDYS-WGAGIK-------G-   63 (312)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEECCCSSCCGGGS--------CTTSEEECCCTTSTT-TTTTCC-------C-
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCCCchhhc--------CCCceEEECccccHH-HHhhcC-------C-
Confidence            68999999999999999999999999999999765422211        356889999999976 544332       3 


Q ss_pred             eEEEEcCCCCCCCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccccCCCC
Q 025509           81 NILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDP  160 (251)
Q Consensus        81 d~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~  160 (251)
                      |+|||+|+...  ...+.++++..+++|+.++..+++++...         +.++||++||.+.... ..+.   ++++.
T Consensus        64 d~vih~A~~~~--~~~~~~~~~~~~~~n~~~~~~l~~a~~~~---------~~~~iv~~SS~~vyg~-~~~~---~~~e~  128 (312)
T 3ko8_A           64 DVVFHFAANPE--VRLSTTEPIVHFNENVVATFNVLEWARQT---------GVRTVVFASSSTVYGD-ADVI---PTPEE  128 (312)
T ss_dssp             SEEEECCSSCS--SSGGGSCHHHHHHHHHHHHHHHHHHHHHH---------TCCEEEEEEEGGGGCS-CSSS---SBCTT
T ss_pred             CEEEECCCCCC--chhhhhCHHHHHHHHHHHHHHHHHHHHHc---------CCCEEEEeCcHHHhCC-CCCC---CCCCC
Confidence            99999999532  24456778899999999999999987443         2469999999765432 2222   23333


Q ss_pred             CCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccC
Q 025509          161 SGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  211 (251)
Q Consensus       161 ~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  211 (251)
                      .+..+...|+.+|.+.+.+++.++.++   |  ++++.+.||.+.+|....
T Consensus       129 ~~~~p~~~Y~~sK~~~e~~~~~~~~~~---g--~~~~~lrp~~v~g~~~~~  174 (312)
T 3ko8_A          129 EPYKPISVYGAAKAAGEVMCATYARLF---G--VRCLAVRYANVVGPRLRH  174 (312)
T ss_dssp             SCCCCCSHHHHHHHHHHHHHHHHHHHH---C--CEEEEEEECEEECTTCCS
T ss_pred             CCCCCCChHHHHHHHHHHHHHHHHHHh---C--CCEEEEeeccccCcCCCC
Confidence            455567799999999999999999887   4  899999999999997654

>1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A*

Probab=99.87  E-value=3.6e-21  Score=166.10  Aligned_cols=183  Identities=16%  Similarity=0.100  Sum_probs=134.4

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchh------HHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHH
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAA------GKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYN   74 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~------~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~   74 (251)
                      |+||||||+|+||++++++|+++|++|++++|+...      ..+..+.+.+.. +..+.++.+|+++.+++.+++++. 
T Consensus         3 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~D~~~~~~~~~~~~~~-   80 (348)
T 1ek6_A            3 EKVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELT-GRSVEFEEMDILDQGALQRLFKKY-   80 (348)
T ss_dssp             SEEEEETTTSHHHHHHHHHHHHTTCCEEEEECSSSSCBCSSSSBHHHHHHHHHH-TCCCEEEECCTTCHHHHHHHHHHC-
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCEEEEEecCCcccccccccHHHHHHHHhcc-CCceEEEECCCCCHHHHHHHHHhc-
Confidence            589999999999999999999999999999885432      222223332211 356889999999999998887752 


Q ss_pred             hcCCCeeEEEEcCCCCCCCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCccc
Q 025509           75 IQHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRF  154 (251)
Q Consensus        75 ~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~  154 (251)
                          ++|+||||||....  ..+.++++..+++|+.++..+++++..    .     +.++||++||.+... .....++
T Consensus        81 ----~~d~vih~A~~~~~--~~~~~~~~~~~~~n~~~~~~l~~~~~~----~-----~~~~iv~~SS~~~~g-~~~~~~~  144 (348)
T 1ek6_A           81 ----SFMAVIHFAGLKAV--GESVQKPLDYYRVNLTGTIQLLEIMKA----H-----GVKNLVFSSSATVYG-NPQYLPL  144 (348)
T ss_dssp             ----CEEEEEECCSCCCH--HHHHHCHHHHHHHHHHHHHHHHHHHHH----T-----TCCEEEEEEEGGGGC-SCSSSSB
T ss_pred             ----CCCEEEECCCCcCc--cchhhchHHHHHHHHHHHHHHHHHHHH----h-----CCCEEEEECcHHHhC-CCCCCCc
Confidence                79999999996432  113456788999999999999886532    2     246999999976542 2222222


Q ss_pred             ccCCCCCCC-CcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCc
Q 025509          155 DKINDPSGY-NGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNI  208 (251)
Q Consensus       155 ~~~~~~~~~-~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~  208 (251)
                      +   +..+. +....|+.+|++++.+++.++.+ . .+  +++..+.|+.+..+.
T Consensus       145 ~---E~~~~~p~~~~Y~~sK~~~e~~~~~~~~~-~-~~--~~~~~lR~~~v~G~~  192 (348)
T 1ek6_A          145 D---EAHPTGGCTNPYGKSKFFIEEMIRDLCQA-D-KT--WNAVLLRYFNPTGAH  192 (348)
T ss_dssp             C---TTSCCCCCSSHHHHHHHHHHHHHHHHHHH-C-TT--CEEEEEEECEEECCC
T ss_pred             C---CCCCCCCCCCchHHHHHHHHHHHHHHHhc-C-CC--cceEEEeeccccCCC
Confidence            2   22222 23678999999999999999887 3 34  788889999998773

>2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A*

Probab=99.87  E-value=1.4e-21  Score=166.33  Aligned_cols=179  Identities=20%  Similarity=0.202  Sum_probs=134.8

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      |+||||||+|+||++++++|+++|++|++++|......       +.. ...+.++.+|+++.+++.+++++.     ++
T Consensus         1 m~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~-------~~~-~~~~~~~~~Dl~~~~~~~~~~~~~-----~~   67 (311)
T 2p5y_A            1 MRVLVTGGAGFIGSHIVEDLLARGLEVAVLDNLATGKR-------ENV-PKGVPFFRVDLRDKEGVERAFREF-----RP   67 (311)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHTTTCEEEEECCCSSCCG-------GGS-CTTCCEECCCTTCHHHHHHHHHHH-----CC
T ss_pred             CEEEEEeCCcHHHHHHHHHHHHCCCEEEEEECCCcCch-------hhc-ccCeEEEECCCCCHHHHHHHHHhc-----CC
Confidence            68999999999999999999999999999988532211       011 235778899999999999888753     68


Q ss_pred             eEEEEcCCCCCCCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccc-cCCcccccCCC
Q 025509           81 NILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAY-HEGIRFDKIND  159 (251)
Q Consensus        81 d~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~-~~~~~~~~~~~  159 (251)
                      |+|||+|+....  ..+.++++..+++|+.++..+++++.+.         +.++||++||.++.++. ....+   +++
T Consensus        68 d~vi~~a~~~~~--~~~~~~~~~~~~~N~~g~~~l~~a~~~~---------~~~~iv~~SS~~~~~g~~~~~~~---~~E  133 (311)
T 2p5y_A           68 THVSHQAAQASV--KVSVEDPVLDFEVNLLGGLNLLEACRQY---------GVEKLVFASTGGAIYGEVPEGER---AEE  133 (311)
T ss_dssp             SEEEECCSCCCH--HHHHHCHHHHHHHHTHHHHHHHHHHHHT---------TCSEEEEEEEHHHHHCCCCTTCC---BCT
T ss_pred             CEEEECccccCc--hhhhhCHHHHHHHHHHHHHHHHHHHHHh---------CCCEEEEeCCChhhcCCCCCCCC---cCC
Confidence            999999996431  2345678889999999999999887532         24699999997333322 11112   222


Q ss_pred             CCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccC
Q 025509          160 PSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  211 (251)
Q Consensus       160 ~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  211 (251)
                      ..+..+...|+.+|++++.+++.++.++   |  ++++.+.|+.+.+|....
T Consensus       134 ~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~--~~~~~lrp~~v~Gp~~~~  180 (311)
T 2p5y_A          134 TWPPRPKSPYAASKAAFEHYLSVYGQSY---G--LKWVSLRYGNVYGPRQDP  180 (311)
T ss_dssp             TSCCCCCSHHHHHHHHHHHHHHHHHHHH---C--CCEEEEEECEEECTTCCS
T ss_pred             CCCCCCCChHHHHHHHHHHHHHHHHHHc---C--CCEEEEeeccccCcCCCC
Confidence            2233455689999999999999998876   4  888899999999987543

>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*

Probab=99.86  E-value=3.9e-21  Score=155.92  Aligned_cols=151  Identities=13%  Similarity=0.148  Sum_probs=113.7

Q ss_pred             CEEEEECCCChhHHHHHHHHH-HcCCEEEEEecCch-hHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCC
Q 025509            1 MDIVITGATSGIGTETARVLA-LRGVHVVMGVRDIA-AGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHH   78 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~-~~G~~Vi~~~r~~~-~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g   78 (251)
                      |++|||||+||||++++++|+ ++|++|++++|+++ +++++.    +.  ...+.++.+|++|.+++.++++       
T Consensus         6 k~vlVtGasg~iG~~~~~~l~~~~g~~V~~~~r~~~~~~~~~~----~~--~~~~~~~~~D~~d~~~~~~~~~-------   72 (221)
T 3r6d_A            6 XYITILGAAGQIAQXLTATLLTYTDMHITLYGRQLKTRIPPEI----ID--HERVTVIEGSFQNPGXLEQAVT-------   72 (221)
T ss_dssp             SEEEEESTTSHHHHHHHHHHHHHCCCEEEEEESSHHHHSCHHH----HT--STTEEEEECCTTCHHHHHHHHT-------
T ss_pred             EEEEEEeCCcHHHHHHHHHHHhcCCceEEEEecCccccchhhc----cC--CCceEEEECCCCCHHHHHHHHc-------
Confidence            469999999999999999999 89999999999976 544432    11  4578999999999999988775       


Q ss_pred             CeeEEEEcCCCCCCCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCC-cccccC
Q 025509           79 QLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEG-IRFDKI  157 (251)
Q Consensus        79 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~-~~~~~~  157 (251)
                      ++|+||||||..                 |+.     ++.+++.+++.     +.++||++||..+....+.. ..|.  
T Consensus        73 ~~d~vv~~ag~~-----------------n~~-----~~~~~~~~~~~-----~~~~iv~iSs~~~~~~~~~~~~~~~--  123 (221)
T 3r6d_A           73 NAEVVFVGAMES-----------------GSD-----MASIVKALSRX-----NIRRVIGVSMAGLSGEFPVALEKWT--  123 (221)
T ss_dssp             TCSEEEESCCCC-----------------HHH-----HHHHHHHHHHT-----TCCEEEEEEETTTTSCSCHHHHHHH--
T ss_pred             CCCEEEEcCCCC-----------------Chh-----HHHHHHHHHhc-----CCCeEEEEeeceecCCCCccccccc--
Confidence            689999999852                 222     77888888775     45799999997765411000 0000  


Q ss_pred             CCCCCCCccc-ccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCC
Q 025509          158 NDPSGYNGFR-AYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATN  207 (251)
Q Consensus       158 ~~~~~~~~~~-~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~  207 (251)
                           .+... .|+.+|.+++.+.+.       .|  ++++.|+||++.++
T Consensus       124 -----~~~~~~~y~~~K~~~e~~~~~-------~~--i~~~~vrpg~v~~~  160 (221)
T 3r6d_A          124 -----FDNLPISYVQGERQARNVLRE-------SN--LNYTILRLTWLYND  160 (221)
T ss_dssp             -----HHTSCHHHHHHHHHHHHHHHH-------SC--SEEEEEEECEEECC
T ss_pred             -----ccccccHHHHHHHHHHHHHHh-------CC--CCEEEEechhhcCC
Confidence                 00112 799999998876653       56  99999999999888

>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*

Probab=99.86  E-value=5.4e-21  Score=165.24  Aligned_cols=184  Identities=14%  Similarity=0.064  Sum_probs=140.5

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCC---CceEEEEecCCCHHHHHHHHHHHHhcC
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPS---AKVDAMELDLSSLASVRNFASEYNIQH   77 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~---~~v~~~~~D~~~~~~i~~~~~~~~~~~   77 (251)
                      |+||||||+|+||++++++|+++|++|++++|+..........+.+..+.   ..+.++.+|++|.+++.++++      
T Consensus        26 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~------   99 (351)
T 3ruf_A           26 KTWLITGVAGFIGSNLLEKLLKLNQVVIGLDNFSTGHQYNLDEVKTLVSTEQWSRFCFIEGDIRDLTTCEQVMK------   99 (351)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHTSCHHHHTTEEEEECCTTCHHHHHHHTT------
T ss_pred             CeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCCCchhhhhhhhhccccccCCceEEEEccCCCHHHHHHHhc------
Confidence            58999999999999999999999999999999766544444444432211   579999999999998887665      


Q ss_pred             CCeeEEEEcCCCCCCCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccccC
Q 025509           78 HQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKI  157 (251)
Q Consensus        78 g~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~  157 (251)
                       ++|+|||+||....  ..+.+++...+++|+.++..+++++.+.         +.++||++||.+.... ..+.+   +
T Consensus       100 -~~d~Vih~A~~~~~--~~~~~~~~~~~~~nv~~~~~ll~a~~~~---------~~~~~v~~SS~~vyg~-~~~~~---~  163 (351)
T 3ruf_A          100 -GVDHVLHQAALGSV--PRSIVDPITTNATNITGFLNILHAAKNA---------QVQSFTYAASSSTYGD-HPALP---K  163 (351)
T ss_dssp             -TCSEEEECCCCCCH--HHHHHCHHHHHHHHTHHHHHHHHHHHHT---------TCSEEEEEEEGGGGTT-CCCSS---B
T ss_pred             -CCCEEEECCccCCc--chhhhCHHHHHHHHHHHHHHHHHHHHHc---------CCCEEEEEecHHhcCC-CCCCC---C
Confidence             69999999996432  2345667889999999999998887543         2459999999765432 22222   2


Q ss_pred             CCCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccC
Q 025509          158 NDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  211 (251)
Q Consensus       158 ~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  211 (251)
                      ++..+..+...|+.+|.+.+.+++.++.+.   |  ++++.+.|+.+.++....
T Consensus       164 ~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---g--~~~~ilRp~~v~G~~~~~  212 (351)
T 3ruf_A          164 VEENIGNPLSPYAVTKYVNEIYAQVYARTY---G--FKTIGLRYFNVFGRRQDP  212 (351)
T ss_dssp             CTTCCCCCCSHHHHHHHHHHHHHHHHHHHH---C--CCCEEEEECSEESTTCCC
T ss_pred             ccCCCCCCCChhHHHHHHHHHHHHHHHHHh---C--CCEEEEeeCceeCcCCCC
Confidence            333344556789999999999999998876   4  777889999999887554

>3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} SCOP: c.2.1.0

Probab=99.86  E-value=6e-21  Score=162.57  Aligned_cols=174  Identities=17%  Similarity=0.149  Sum_probs=131.0

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      |+||||||+|+||++++++|+++|+.|++..|+....+..         ...+.++.+|+++ +++.++++       ++
T Consensus         2 ~~vlVTGatG~iG~~l~~~L~~~g~~v~~~~~~~~~~~~~---------~~~~~~~~~Dl~~-~~~~~~~~-------~~   64 (313)
T 3ehe_A            2 SLIVVTGGAGFIGSHVVDKLSESNEIVVIDNLSSGNEEFV---------NEAARLVKADLAA-DDIKDYLK-------GA   64 (313)
T ss_dssp             -CEEEETTTSHHHHHHHHHHTTTSCEEEECCCSSCCGGGS---------CTTEEEECCCTTT-SCCHHHHT-------TC
T ss_pred             CEEEEECCCchHHHHHHHHHHhCCCEEEEEcCCCCChhhc---------CCCcEEEECcCCh-HHHHHHhc-------CC
Confidence            5799999999999999999999995555555554332111         3568899999998 87777664       79


Q ss_pred             eEEEEcCCCCCCCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccccCCCC
Q 025509           81 NILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDP  160 (251)
Q Consensus        81 d~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~  160 (251)
                      |+|||+|+...  ...+.++++..+++|+.++..+++++...         +.++||++||.+.... ....+   +.+.
T Consensus        65 d~vih~a~~~~--~~~~~~~~~~~~~~nv~~~~~l~~~~~~~---------~~~~iv~~SS~~vyg~-~~~~~---~~E~  129 (313)
T 3ehe_A           65 EEVWHIAANPD--VRIGAENPDEIYRNNVLATYRLLEAMRKA---------GVSRIVFTSTSTVYGE-AKVIP---TPED  129 (313)
T ss_dssp             SEEEECCCCCC--CC-CCCCHHHHHHHHHHHHHHHHHHHHHH---------TCCEEEEECCGGGGCS-CSSSS---BCTT
T ss_pred             CEEEECCCCCC--hhhhhhCHHHHHHHHHHHHHHHHHHHHHc---------CCCeEEEeCchHHhCc-CCCCC---CCCC
Confidence            99999999532  34466788999999999999998885432         3469999999765432 22222   2333


Q ss_pred             CCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccC
Q 025509          161 SGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  211 (251)
Q Consensus       161 ~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  211 (251)
                      .+..+...|+.+|.+.+.+++.++.++   |  ++++.+.|+.+.+|....
T Consensus       130 ~~~~~~~~Y~~sK~~~e~~~~~~~~~~---g--~~~~ilRp~~v~G~~~~~  175 (313)
T 3ehe_A          130 YPTHPISLYGASKLACEALIESYCHTF---D--MQAWIYRFANVIGRRSTH  175 (313)
T ss_dssp             SCCCCCSHHHHHHHHHHHHHHHHHHHT---T--CEEEEEECSCEESTTCCC
T ss_pred             CCCCCCCHHHHHHHHHHHHHHHHHHhc---C--CCEEEEeeccccCcCCCc
Confidence            355566789999999999999999887   4  888999999999886543

>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A*

Probab=99.86  E-value=3.3e-21  Score=158.70  Aligned_cols=164  Identities=14%  Similarity=0.091  Sum_probs=122.9

Q ss_pred             CEEEEECCCChhHHHHHHHHHHc--CCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCC
Q 025509            1 MDIVITGATSGIGTETARVLALR--GVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHH   78 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~--G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g   78 (251)
                      |+||||||+|+||++++++|+++  |++|++++|++.+.++.         ...+.++.+|+++.+++.++++       
T Consensus         5 ~~ilVtGasG~iG~~l~~~l~~~~~g~~V~~~~r~~~~~~~~---------~~~~~~~~~D~~d~~~~~~~~~-------   68 (253)
T 1xq6_A            5 PTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKI---------GGEADVFIGDITDADSINPAFQ-------   68 (253)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTTTCEEEEEESCHHHHHHT---------TCCTTEEECCTTSHHHHHHHHT-------
T ss_pred             CEEEEEcCCcHHHHHHHHHHHhcCCCcEEEEEEcCCCchhhc---------CCCeeEEEecCCCHHHHHHHHc-------
Confidence            57999999999999999999999  89999999987554322         3467889999999999988775       


Q ss_pred             CeeEEEEcCCCCCC--C---------CcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCcccccc
Q 025509           79 QLNILINNAGIMGT--P---------FMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLA  147 (251)
Q Consensus        79 ~id~lv~~ag~~~~--~---------~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~  147 (251)
                      .+|+||||||....  .         .+...++++..+++|+.++..+++++.+.         +.++||++||.++...
T Consensus        69 ~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~---------~~~~iv~~SS~~~~~~  139 (253)
T 1xq6_A           69 GIDALVILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKVA---------GVKHIVVVGSMGGTNP  139 (253)
T ss_dssp             TCSEEEECCCCCCEECTTCCTTSSCCCCEECCTTCSHHHHTTHHHHHHHHHHHHH---------TCSEEEEEEETTTTCT
T ss_pred             CCCEEEEeccccccccccccccccccchhhccccccceeeeHHHHHHHHHHHHHc---------CCCEEEEEcCccCCCC
Confidence            58999999996531  0         12233455678999999998888876543         2469999999765421


Q ss_pred             ccCCcccccCCCCCCCC--cccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCccc
Q 025509          148 YHEGIRFDKINDPSGYN--GFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIR  210 (251)
Q Consensus       148 ~~~~~~~~~~~~~~~~~--~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~  210 (251)
                                  ..+..  +...|+.+|.+++.+++.       .|  ++++.|+||++.++...
T Consensus       140 ------------~~~~~~~~~~~y~~sK~~~e~~~~~-------~~--i~~~~vrpg~v~~~~~~  183 (253)
T 1xq6_A          140 ------------DHPLNKLGNGNILVWKRKAEQYLAD-------SG--TPYTIIRAGGLLDKEGG  183 (253)
T ss_dssp             ------------TCGGGGGGGCCHHHHHHHHHHHHHT-------SS--SCEEEEEECEEECSCSS
T ss_pred             ------------CCccccccchhHHHHHHHHHHHHHh-------CC--CceEEEecceeecCCcc
Confidence                        00111  113466799998877642       56  88999999999998643

>1db3_A GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lyase; 2.30A {Escherichia coli} SCOP: c.2.1.2

Probab=99.86  E-value=1.5e-20  Score=163.70  Aligned_cols=186  Identities=16%  Similarity=0.059  Sum_probs=130.4

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHH-HHHHHHHhhC--CCCceEEEEecCCCHHHHHHHHHHHHhcC
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGK-DVKETIVKEI--PSAKVDAMELDLSSLASVRNFASEYNIQH   77 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~-~~~~~~~~~~--~~~~v~~~~~D~~~~~~i~~~~~~~~~~~   77 (251)
                      |+||||||+|+||++++++|+++|++|++++|+..... +..+.+.+..  .+..+.++.+|+++.+++.++++..    
T Consensus         2 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~----   77 (372)
T 1db3_A            2 KVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYGDLSDTSNLTRILREV----   77 (372)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEECC---------------------CCEEECCCCSSCHHHHHHHHHHH----
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEECCCcccchHHHHHHhhccccCCCceEEEECCCCCHHHHHHHHHhc----
Confidence            68999999999999999999999999999999765321 1111121110  1346888999999999999988865    


Q ss_pred             CCeeEEEEcCCCCCCCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccccC
Q 025509           78 HQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKI  157 (251)
Q Consensus        78 g~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~  157 (251)
                       ++|+||||||....  ..+.++++..+++|+.++..+++++.+...+      +.++||++||.+.... ..+.+   +
T Consensus        78 -~~d~vih~A~~~~~--~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~------~~~~iv~~SS~~v~g~-~~~~~---~  144 (372)
T 1db3_A           78 -QPDEVYNLGAMSHV--AVSFESPEYTADVDAMGTLRLLEAIRFLGLE------KKTRFYQASTSELYGL-VQEIP---Q  144 (372)
T ss_dssp             -CCSEEEECCCCCTT--TTTTSCHHHHHHHHTHHHHHHHHHHHHTTCT------TTCEEEEEEEGGGGTT-CCSSS---B
T ss_pred             -CCCEEEECCcccCc--cccccCHHHHHHHHHHHHHHHHHHHHHhCCC------CCcEEEEeCChhhhCC-CCCCC---C
Confidence             68999999996432  2355678889999999999999988765322      1369999999765432 11112   2


Q ss_pred             CCCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCc
Q 025509          158 NDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNI  208 (251)
Q Consensus       158 ~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~  208 (251)
                      ++..+..+...|+.+|++++.+++.++.+++     +.+..+.|..+..|.
T Consensus       145 ~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~-----~~~~~~r~~~~~gp~  190 (372)
T 1db3_A          145 KETTPFYPRSPYAVAKLYAYWITVNYRESYG-----MYACNGILFNHESPR  190 (372)
T ss_dssp             CTTSCCCCCSHHHHHHHHHHHHHHHHHHHHC-----CCEEEEEECCEECTT
T ss_pred             CccCCCCCCChHHHHHHHHHHHHHHHHHHhC-----CCeEEEEECCccCCC
Confidence            3333444567899999999999999998764     444446666665554

>1oc2_A DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnose; HET: TDX NAD; 1.5A {Streptococcus suis} SCOP: c.2.1.2 PDB: 1ker_A* 1ket_A* 1kep_A*

Probab=99.86  E-value=7.6e-21  Score=164.03  Aligned_cols=182  Identities=19%  Similarity=0.171  Sum_probs=135.9

Q ss_pred             CEEEEECCCChhHHHHHHHHHHc--CCEEEEEecCchh-HHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcC
Q 025509            1 MDIVITGATSGIGTETARVLALR--GVHVVMGVRDIAA-GKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQH   77 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~--G~~Vi~~~r~~~~-~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~   77 (251)
                      |+||||||+|+||++++++|+++  |++|++++|+... ..+.   + +...+..+.++.+|+++.+++.++++      
T Consensus         5 ~~vlVTGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~---~-~~~~~~~~~~~~~Dl~d~~~~~~~~~------   74 (348)
T 1oc2_A            5 KNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKAN---L-EAILGDRVELVVGDIADAELVDKLAA------   74 (348)
T ss_dssp             SEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGG---T-GGGCSSSEEEEECCTTCHHHHHHHHT------
T ss_pred             cEEEEeCCccHHHHHHHHHHHHhCCCCEEEEEeCCCCCCChhH---H-hhhccCCeEEEECCCCCHHHHHHHhh------
Confidence            57999999999999999999998  8999999986421 0111   1 11113568899999999998887765      


Q ss_pred             CCeeEEEEcCCCCCCCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCC------
Q 025509           78 HQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEG------  151 (251)
Q Consensus        78 g~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~------  151 (251)
                       .+|+||||||....  +.+.++++..+++|+.++..+++++.+.          +++||++||.+.......+      
T Consensus        75 -~~d~vih~A~~~~~--~~~~~~~~~~~~~Nv~g~~~l~~a~~~~----------~~~~v~~SS~~vyg~~~~~~~~~~~  141 (348)
T 1oc2_A           75 -KADAIVHYAAESHN--DNSLNDPSPFIHTNFIGTYTLLEAARKY----------DIRFHHVSTDEVYGDLPLREDLPGH  141 (348)
T ss_dssp             -TCSEEEECCSCCCH--HHHHHCCHHHHHHHTHHHHHHHHHHHHH----------TCEEEEEEEGGGGCCBCCGGGSTTT
T ss_pred             -cCCEEEECCcccCc--cchhhCHHHHHHHHHHHHHHHHHHHHHh----------CCeEEEecccceeCCCccccccccc
Confidence             46999999996431  2344667889999999999999998765          1399999997644221110      


Q ss_pred             --cccccCCCCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCccc
Q 025509          152 --IRFDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIR  210 (251)
Q Consensus       152 --~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~  210 (251)
                        ....++++..+..+...|+.+|++.+.+++.++.++   |  ++++.+.||.+.++...
T Consensus       142 ~~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---g--i~~~ilrp~~v~G~~~~  197 (348)
T 1oc2_A          142 GEGPGEKFTAETNYNPSSPYSSTKAASDLIVKAWVRSF---G--VKATISNCSNNYGPYQH  197 (348)
T ss_dssp             TCSTTSSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH---C--CEEEEEEECCEESTTCC
T ss_pred             ccccCCCcCCCCCCCCCCccHHHHHHHHHHHHHHHHHh---C--CCEEEEeeceeeCCCCC
Confidence              001223333455566799999999999999999877   4  88999999999998864

>2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis}

Probab=99.86  E-value=1.3e-20  Score=161.42  Aligned_cols=175  Identities=16%  Similarity=0.104  Sum_probs=134.2

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      |+||||||+|+||++++++|+++|++|++++|+.....       +.. ...+.++.+|+++.+++.+++++     .++
T Consensus         2 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~-------~~~-~~~~~~~~~D~~~~~~~~~~~~~-----~~~   68 (330)
T 2c20_A            2 NSILICGGAGYIGSHAVKKLVDEGLSVVVVDNLQTGHE-------DAI-TEGAKFYNGDLRDKAFLRDVFTQ-----ENI   68 (330)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCG-------GGS-CTTSEEEECCTTCHHHHHHHHHH-----SCE
T ss_pred             CEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCCCcCch-------hhc-CCCcEEEECCCCCHHHHHHHHhh-----cCC
Confidence            58999999999999999999999999999998754321       112 23688999999999999888775     379


Q ss_pred             eEEEEcCCCCCCCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccccCCCC
Q 025509           81 NILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDP  160 (251)
Q Consensus        81 d~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~  160 (251)
                      |+|||+||....  ..+.++++..+++|+.++..+++++...         +.++||++||.+... ...+.+   +++.
T Consensus        69 d~vih~a~~~~~--~~~~~~~~~~~~~n~~~~~~l~~a~~~~---------~~~~~v~~Ss~~~~~-~~~~~~---~~E~  133 (330)
T 2c20_A           69 EAVMHFAADSLV--GVSMEKPLQYYNNNVYGALCLLEVMDEF---------KVDKFIFSSTAATYG-EVDVDL---ITEE  133 (330)
T ss_dssp             EEEEECCCCCCH--HHHHHSHHHHHHHHHHHHHHHHHHHHHT---------TCCEEEEECCGGGGC-SCSSSS---BCTT
T ss_pred             CEEEECCcccCc--cccccCHHHHHHHHhHHHHHHHHHHHHc---------CCCEEEEeCCceeeC-CCCCCC---CCcC
Confidence            999999996432  1134678889999999999998876432         246999999976543 222222   2333


Q ss_pred             CCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCc
Q 025509          161 SGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNI  208 (251)
Q Consensus       161 ~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~  208 (251)
                      .+..+...|+.+|.+.+.+++.++.++   |  ++++.+.|+.+.++.
T Consensus       134 ~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~--~~~~ilrp~~v~G~~  176 (330)
T 2c20_A          134 TMTNPTNTYGETKLAIEKMLHWYSQAS---N--LRYKIFRYFNVAGAT  176 (330)
T ss_dssp             SCCCCSSHHHHHHHHHHHHHHHHHHTS---S--CEEEEEECSEEECCC
T ss_pred             CCCCCCChHHHHHHHHHHHHHHHHHHh---C--CcEEEEecCcccCCC
Confidence            344456789999999999999988765   5  888999999998875

>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}

Probab=99.86  E-value=4.1e-21  Score=165.24  Aligned_cols=172  Identities=19%  Similarity=0.140  Sum_probs=125.6

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      |+||||||+|+||++++++|+++|++|++++|+..+.++.    .    ...+.++.+|++|.+++.++++       ++
T Consensus        14 M~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l----~----~~~~~~~~~Dl~d~~~~~~~~~-------~~   78 (342)
T 2x4g_A           14 VKYAVLGATGLLGHHAARAIRAAGHDLVLIHRPSSQIQRL----A----YLEPECRVAEMLDHAGLERALR-------GL   78 (342)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTCEEEEEECTTSCGGGG----G----GGCCEEEECCTTCHHHHHHHTT-------TC
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCEEEEEecChHhhhhh----c----cCCeEEEEecCCCHHHHHHHHc-------CC
Confidence            4799999999999999999999999999999987653321    1    2257889999999998887664       58


Q ss_pred             eEEEEcCCCCCCCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccccCCCC
Q 025509           81 NILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDP  160 (251)
Q Consensus        81 d~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~  160 (251)
                      |+|||+||...    .+.+++++.+++|+.++..+++++.+.         +.++||++||.+.......+..   .++.
T Consensus        79 d~vih~a~~~~----~~~~~~~~~~~~n~~~~~~l~~a~~~~---------~~~~~v~~SS~~~~~~~~~~~~---~~E~  142 (342)
T 2x4g_A           79 DGVIFSAGYYP----SRPRRWQEEVASALGQTNPFYAACLQA---------RVPRILYVGSAYAMPRHPQGLP---GHEG  142 (342)
T ss_dssp             SEEEEC----------------CHHHHHHHHHHHHHHHHHHH---------TCSCEEEECCGGGSCCCTTSSC---BCTT
T ss_pred             CEEEECCccCc----CCCCCHHHHHHHHHHHHHHHHHHHHHc---------CCCeEEEECCHHhhCcCCCCCC---CCCC
Confidence            99999999643    234567889999999999999998764         2469999999876543221100   1222


Q ss_pred             CCCCc----ccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcc
Q 025509          161 SGYNG----FRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNII  209 (251)
Q Consensus       161 ~~~~~----~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~  209 (251)
                      .+..+    ...|+.+|.+.+.+++.++.   . |  ++++.|.||.+.++..
T Consensus       143 ~~~~p~~~~~~~Y~~sK~~~e~~~~~~~~---~-g--~~~~ilrp~~v~g~~~  189 (342)
T 2x4g_A          143 LFYDSLPSGKSSYVLCKWALDEQAREQAR---N-G--LPVVIGIPGMVLGELD  189 (342)
T ss_dssp             CCCSSCCTTSCHHHHHHHHHHHHHHHHHH---T-T--CCEEEEEECEEECSCC
T ss_pred             CCCCccccccChHHHHHHHHHHHHHHHhh---c-C--CcEEEEeCCceECCCC
Confidence            22333    66899999999999998876   2 5  8888999999999876

>1n7h_A GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, short-chain dehydrogenase/reductase, LYA; HET: NDP GDP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1n7g_A*

Probab=99.86  E-value=1.4e-20  Score=164.59  Aligned_cols=184  Identities=14%  Similarity=0.025  Sum_probs=133.7

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchh-----HHHHHHHHHhhCCCC-ceEEEEecCCCHHHHHHHHHHHH
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAA-----GKDVKETIVKEIPSA-KVDAMELDLSSLASVRNFASEYN   74 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~-----~~~~~~~~~~~~~~~-~v~~~~~D~~~~~~i~~~~~~~~   74 (251)
                      |+||||||+|+||++++++|+++|++|++++|+...     ++.....+...  +. .+.++.+|+++.+++.++++.. 
T Consensus        29 k~vlVtGatG~IG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~Dl~d~~~~~~~~~~~-  105 (381)
T 1n7h_A           29 KIALITGITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNTQRINHIYIDPHNV--NKALMKLHYADLTDASSLRRWIDVI-  105 (381)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTTTTC----------CCEEEEECCTTCHHHHHHHHHHH-
T ss_pred             CeEEEEcCCchHHHHHHHHHHHCCCEEEEEecCCccccchhhhhhhhccccc--cccceEEEECCCCCHHHHHHHHHhc-
Confidence            479999999999999999999999999999997643     22211111100  12 6889999999999999988875 


Q ss_pred             hcCCCeeEEEEcCCCCCCCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCccc
Q 025509           75 IQHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRF  154 (251)
Q Consensus        75 ~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~  154 (251)
                          ++|+||||||....  ..+.++++..+++|+.++..+++++.+...++    +..++||++||.+..... .+   
T Consensus       106 ----~~d~Vih~A~~~~~--~~~~~~~~~~~~~nv~~~~~l~~a~~~~~~~~----~~~~~~v~~SS~~vyg~~-~~---  171 (381)
T 1n7h_A          106 ----KPDEVYNLAAQSHV--AVSFEIPDYTADVVATGALRLLEAVRSHTIDS----GRTVKYYQAGSSEMFGST-PP---  171 (381)
T ss_dssp             ----CCSEEEECCSCCCH--HHHHHSHHHHHHHHTHHHHHHHHHHHHHHHHH----CCCCEEEEEEEGGGGTTS-CS---
T ss_pred             ----CCCEEEECCcccCc--cccccCHHHHHHHHHHHHHHHHHHHHHhCCcc----CCccEEEEeCcHHHhCCC-CC---
Confidence                68999999996432  23356788999999999999999999987653    124699999997654321 11   


Q ss_pred             ccCCCCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCC
Q 025509          155 DKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATN  207 (251)
Q Consensus       155 ~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~  207 (251)
                       ++++..+..+...|+.+|++.+.+++.++.+++     +.+..+.|..+..|
T Consensus       172 -~~~E~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~-----~~~~~~r~~~~~gp  218 (381)
T 1n7h_A          172 -PQSETTPFHPRSPYAASKCAAHWYTVNYREAYG-----LFACNGILFNHESP  218 (381)
T ss_dssp             -SBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHHC-----CEEEEEEECCEECT
T ss_pred             -CCCCCCCCCCCCchHHHHHHHHHHHHHHHHHhC-----CcEEEEEeCceeCC
Confidence             233333445567899999999999999988764     33333455544444

>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*

Probab=99.86  E-value=2.8e-21  Score=165.99  Aligned_cols=152  Identities=16%  Similarity=0.197  Sum_probs=114.5

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      |+||||||+|+||++++++|+++|++|++++|+.....+..    +..  ..+.++.+|++|.+++.++++++     ++
T Consensus        21 ~~vlVTGasG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~----~~l--~~v~~~~~Dl~d~~~~~~~~~~~-----~~   89 (330)
T 2pzm_A           21 MRILITGGAGCLGSNLIEHWLPQGHEILVIDNFATGKREVL----PPV--AGLSVIEGSVTDAGLLERAFDSF-----KP   89 (330)
T ss_dssp             CEEEEETTTSHHHHHHHHHHGGGTCEEEEEECCSSSCGGGS----CSC--TTEEEEECCTTCHHHHHHHHHHH-----CC
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCccchhhh----hcc--CCceEEEeeCCCHHHHHHHHhhc-----CC
Confidence            57999999999999999999999999999999654322111    111  36888999999999999988875     79


Q ss_pred             eEEEEcCCCCCCCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCc--ccccCC
Q 025509           81 NILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGI--RFDKIN  158 (251)
Q Consensus        81 d~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~--~~~~~~  158 (251)
                      |+||||||.....   +.++++  +++|+.++..+++++...         +.++||++||.+.... ..+.  ++   +
T Consensus        90 D~vih~A~~~~~~---~~~~~~--~~~N~~~~~~l~~a~~~~---------~~~~iV~~SS~~~~~~-~~~~~~~~---~  151 (330)
T 2pzm_A           90 THVVHSAAAYKDP---DDWAED--AATNVQGSINVAKAASKA---------GVKRLLNFQTALCYGR-PATVPIPI---D  151 (330)
T ss_dssp             SEEEECCCCCSCT---TCHHHH--HHHHTHHHHHHHHHHHHH---------TCSEEEEEEEGGGGCS-CSSSSBCT---T
T ss_pred             CEEEECCccCCCc---cccChh--HHHHHHHHHHHHHHHHHc---------CCCEEEEecCHHHhCC-CccCCCCc---C
Confidence            9999999975432   455666  999999999999988742         3579999999865431 1111  11   1


Q ss_pred             CCCCCCcccccchhHHHHHHHHHHH
Q 025509          159 DPSGYNGFRAYSQSKLANILHANEL  183 (251)
Q Consensus       159 ~~~~~~~~~~Y~~sK~a~~~~~~~l  183 (251)
                      +..  .+...|+.+|++++.+++.+
T Consensus       152 E~~--~~~~~Y~~sK~~~e~~~~~~  174 (330)
T 2pzm_A          152 SPT--APFTSYGISKTAGEAFLMMS  174 (330)
T ss_dssp             CCC--CCCSHHHHHHHHHHHHHHTC
T ss_pred             CCC--CCCChHHHHHHHHHHHHHHc
Confidence            111  24568999999999988876

>2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A*

Probab=99.86  E-value=9.5e-21  Score=162.93  Aligned_cols=185  Identities=21%  Similarity=0.127  Sum_probs=130.6

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCC--CceEEEEecCCCHHHHHHHHHHHHhcCC
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPS--AKVDAMELDLSSLASVRNFASEYNIQHH   78 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~--~~v~~~~~D~~~~~~i~~~~~~~~~~~g   78 (251)
                      |+||||||+|+||++++++|+++|++|+++.|+.....+... +.+ .+.  ..+.++.+|++|.+++.++++       
T Consensus         6 ~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~-~~~-~~~~~~~~~~~~~Dl~d~~~~~~~~~-------   76 (337)
T 2c29_D            6 ETVCVTGASGFIGSWLVMRLLERGYTVRATVRDPTNVKKVKH-LLD-LPKAETHLTLWKADLADEGSFDEAIK-------   76 (337)
T ss_dssp             CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCTTCHHHHHH-HHT-STTHHHHEEEEECCTTSTTTTHHHHT-------
T ss_pred             CEEEEECCchHHHHHHHHHHHHCCCEEEEEECCcchhHHHHH-HHh-cccCCCeEEEEEcCCCCHHHHHHHHc-------
Confidence            579999999999999999999999999999998764433221 111 111  258889999999988887664       


Q ss_pred             CeeEEEEcCCCCCCCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCC-cccccC
Q 025509           79 QLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEG-IRFDKI  157 (251)
Q Consensus        79 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~-~~~~~~  157 (251)
                      .+|+|||+|+... .  ...+..+..+++|+.++..+++++.+..        ..++||++||.++....... ..+++-
T Consensus        77 ~~d~Vih~A~~~~-~--~~~~~~~~~~~~nv~gt~~ll~a~~~~~--------~~~riV~~SS~~~~~~~~~~~~~~~E~  145 (337)
T 2c29_D           77 GCTGVFHVATPMD-F--ESKDPENEVIKPTIEGMLGIMKSCAAAK--------TVRRLVFTSSAGTVNIQEHQLPVYDES  145 (337)
T ss_dssp             TCSEEEECCCCCC-S--SCSSHHHHTHHHHHHHHHHHHHHHHHHS--------CCCEEEEECCGGGTSCSSSCCSEECTT
T ss_pred             CCCEEEEeccccC-C--CCCChHHHHHHHHHHHHHHHHHHHHhCC--------CccEEEEeeeHhhcccCCCCCcccCcc
Confidence            5899999998542 1  1122345689999999999999887642        14699999998765432211 111111


Q ss_pred             CCCCC-------CCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccC
Q 025509          158 NDPSG-------YNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  211 (251)
Q Consensus       158 ~~~~~-------~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  211 (251)
                      .. .+       .+....|+.||.+.+.+++.++.+.   |  ++++.|.|+.+.+|....
T Consensus       146 ~~-~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---g--i~~~~lrp~~v~Gp~~~~  200 (337)
T 2c29_D          146 CW-SDMEFCRAKKMTAWMYFVSKTLAEQAAWKYAKEN---N--IDFITIIPTLVVGPFIMS  200 (337)
T ss_dssp             CC-CCHHHHHHHCCTTHHHHHHHHHHHHHHHHHHHHH---T--CCEEEEEECEEESCCSCS
T ss_pred             cC-CchhhhcccCCccchHHHHHHHHHHHHHHHHHHc---C--CcEEEEeCCceECCCCCC
Confidence            00 00       0123469999999988877766543   5  889999999999997543

>3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens}

Probab=99.86  E-value=2.1e-21  Score=161.94  Aligned_cols=164  Identities=18%  Similarity=0.166  Sum_probs=128.0

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      |+||||||+|+||++++++|+++|++|++++|+.....           ...+.++.+|+++.+++.++++       ++
T Consensus         3 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~-----------~~~~~~~~~Dl~d~~~~~~~~~-------~~   64 (267)
T 3ay3_A            3 NRLLVTGAAGGVGSAIRPHLGTLAHEVRLSDIVDLGAA-----------EAHEEIVACDLADAQAVHDLVK-------DC   64 (267)
T ss_dssp             EEEEEESTTSHHHHHHGGGGGGTEEEEEECCSSCCCCC-----------CTTEEECCCCTTCHHHHHHHHT-------TC
T ss_pred             ceEEEECCCCHHHHHHHHHHHhCCCEEEEEeCCCcccc-----------CCCccEEEccCCCHHHHHHHHc-------CC
Confidence            47999999999999999999999999999999865310           1357889999999998887765       58


Q ss_pred             eEEEEcCCCCCCCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccccCCCC
Q 025509           81 NILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDP  160 (251)
Q Consensus        81 d~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~  160 (251)
                      |+||||||..      +.++++..+++|+.++..+++++.+.         +.++||++||...........+   +++.
T Consensus        65 d~vi~~a~~~------~~~~~~~~~~~n~~~~~~l~~a~~~~---------~~~~iv~~SS~~~~~~~~~~~~---~~E~  126 (267)
T 3ay3_A           65 DGIIHLGGVS------VERPWNDILQANIIGAYNLYEAARNL---------GKPRIVFASSNHTIGYYPRTTR---IDTE  126 (267)
T ss_dssp             SEEEECCSCC------SCCCHHHHHHHTHHHHHHHHHHHHHT---------TCCEEEEEEEGGGSTTSBTTSC---BCTT
T ss_pred             CEEEECCcCC------CCCCHHHHHHHHHHHHHHHHHHHHHh---------CCCEEEEeCCHHHhCCCCCCCC---CCCC
Confidence            9999999964      24567889999999999999987542         3469999999876543222222   2233


Q ss_pred             CCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccc
Q 025509          161 SGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIA  205 (251)
Q Consensus       161 ~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~  205 (251)
                      .+..+...|+.+|++++.+++.++.+   .|  ++++.+.||.+.
T Consensus       127 ~~~~~~~~Y~~sK~~~e~~~~~~~~~---~g--i~~~~lrp~~v~  166 (267)
T 3ay3_A          127 VPRRPDSLYGLSKCFGEDLASLYYHK---FD--IETLNIRIGSCF  166 (267)
T ss_dssp             SCCCCCSHHHHHHHHHHHHHHHHHHT---TC--CCEEEEEECBCS
T ss_pred             CCCCCCChHHHHHHHHHHHHHHHHHH---cC--CCEEEEeceeec
Confidence            34445678999999999999888643   46  888999999984

>1r6d_A TDP-glucose-4,6-dehydratase; rossmann fold, short-chain dehydrogenase/reductase, lyase; HET: NAD DAU; 1.35A {Streptomyces venezuelae} SCOP: c.2.1.2 PDB: 1r66_A*

Probab=99.85  E-value=1.3e-20  Score=161.90  Aligned_cols=179  Identities=16%  Similarity=0.106  Sum_probs=134.4

Q ss_pred             CEEEEECCCChhHHHHHHHHHHc---C---CEEEEEecCchh--HHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHH
Q 025509            1 MDIVITGATSGIGTETARVLALR---G---VHVVMGVRDIAA--GKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASE   72 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~---G---~~Vi~~~r~~~~--~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~   72 (251)
                      |+||||||+|+||++++++|+++   |   ++|++++|+...  .+.    +.+...+..+.++.+|+++.+++.+++  
T Consensus         1 M~vlVTGatG~iG~~l~~~L~~~~~~g~~~~~V~~~~r~~~~~~~~~----~~~~~~~~~~~~~~~Dl~d~~~~~~~~--   74 (337)
T 1r6d_A            1 MRLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRAN----LAPVDADPRLRFVHGDIRDAGLLAREL--   74 (337)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEECCCTTCCGGG----GGGGTTCTTEEEEECCTTCHHHHHHHT--
T ss_pred             CeEEEECCccHHHHHHHHHHHhhhcCCCCceEEEEEECCCccCchhh----hhhcccCCCeEEEEcCCCCHHHHHHHh--
Confidence            68999999999999999999997   8   999999986421  111    111111356889999999998888766  


Q ss_pred             HHhcCCCeeEEEEcCCCCCCCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCc
Q 025509           73 YNIQHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGI  152 (251)
Q Consensus        73 ~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~  152 (251)
                           .++|+|||+||....  +.+.++++..+++|+.++..+++++.+..         .++||++||.+..... .+.
T Consensus        75 -----~~~d~Vih~A~~~~~--~~~~~~~~~~~~~Nv~~~~~l~~a~~~~~---------~~~~v~~SS~~vyg~~-~~~  137 (337)
T 1r6d_A           75 -----RGVDAIVHFAAESHV--DRSIAGASVFTETNVQGTQTLLQCAVDAG---------VGRVVHVSTNQVYGSI-DSG  137 (337)
T ss_dssp             -----TTCCEEEECCSCCCH--HHHHHCCHHHHHHHTHHHHHHHHHHHHTT---------CCEEEEEEEGGGGCCC-SSS
T ss_pred             -----cCCCEEEECCCccCc--hhhhhCHHHHHHHHHHHHHHHHHHHHHcC---------CCEEEEecchHHhCCC-CCC
Confidence                 379999999996431  22345678899999999999999887652         3599999997654321 111


Q ss_pred             ccccCCCCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCccc
Q 025509          153 RFDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIR  210 (251)
Q Consensus       153 ~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~  210 (251)
                      +   +++..+..+...|+.+|.+.+.+++.++.++   |  ++++.+.||.+.++...
T Consensus       138 ~---~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---g--~~~~ilrp~~v~G~~~~  187 (337)
T 1r6d_A          138 S---WTESSPLEPNSPYAASKAGSDLVARAYHRTY---G--LDVRITRCCNNYGPYQH  187 (337)
T ss_dssp             C---BCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH---C--CCEEEEEECEEECTTCC
T ss_pred             C---CCCCCCCCCCCchHHHHHHHHHHHHHHHHHH---C--CCEEEEEeeeeECCCCC
Confidence            2   2233344556789999999999999998876   4  77888999999998754

>1udb_A Epimerase, UDP-galactose-4-epimerase; isomerase; HET: NAD UFG; 1.65A {Escherichia coli} SCOP: c.2.1.2 PDB: 1lrj_A* 1nai_A* 1uda_A* 1nah_A* 1xel_A* 1kvq_A* 1kvs_A* 1udc_A* 2udp_A* 1a9z_A* 1kvt_A* 1kvr_A* 1lrk_A* 1lrl_A* 1kvu_A* 1a9y_A*

Probab=99.85  E-value=2.5e-20  Score=160.28  Aligned_cols=182  Identities=16%  Similarity=0.098  Sum_probs=129.2

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      |+||||||+|+||++++++|+++|++|++++|......+..+.+.+.. +..+.++.+|+++.+++.++++..     ++
T Consensus         1 m~vlVTGatG~iG~~l~~~L~~~G~~V~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~~~~~~~~~~-----~~   74 (338)
T 1udb_A            1 MRVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLG-GKHPTFVEGDIRNEALMTEILHDH-----AI   74 (338)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTTHHHHHHHHH-TSCCEEEECCTTCHHHHHHHHHHT-----TC
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCEEEEEecCCCcchhHHHHHHhhc-CCcceEEEccCCCHHHHHHHhhcc-----CC
Confidence            679999999999999999999999999998864322111222222211 346788999999999998887752     69


Q ss_pred             eEEEEcCCCCCCCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccccCCCC
Q 025509           81 NILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDP  160 (251)
Q Consensus        81 d~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~  160 (251)
                      |+||||||....  ....+++++.+++|+.++..+++++..    .     +.++||++||.+... .....++   ++.
T Consensus        75 D~vih~A~~~~~--~~~~~~~~~~~~~n~~~~~~l~~~~~~----~-----~~~~iv~~SS~~~~g-~~~~~~~---~e~  139 (338)
T 1udb_A           75 DTVIHFAGLKAV--GESVQKPLEYYDNNVNGTLRLISAMRA----A-----NVKNFIFSSSATVYG-DNPKIPY---VES  139 (338)
T ss_dssp             SEEEECCSCCCH--HHHHHCHHHHHHHHHHHHHHHHHHHHH----H-----TCCEEEEEEEGGGGC-SCCSSSB---CTT
T ss_pred             CEEEECCccCcc--ccchhcHHHHHHHHHHHHHHHHHHHHh----c-----CCCeEEEEccHHHhC-CCCCCCc---Ccc
Confidence            999999996432  112345678899999999998876533    2     246999999976542 1111122   222


Q ss_pred             CCC-CcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCC
Q 025509          161 SGY-NGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATN  207 (251)
Q Consensus       161 ~~~-~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~  207 (251)
                      .+. +....|+.+|++++.+++.++.+.  .|  +++..+.|+.+..+
T Consensus       140 ~~~~~~~~~Y~~sK~~~e~~~~~~~~~~--~~--~~~~ilR~~~v~G~  183 (338)
T 1udb_A          140 FPTGTPQSPYGKSKLMVEQILTDLQKAQ--PD--WSIALLRYFNPVGA  183 (338)
T ss_dssp             SCCCCCSSHHHHHHHHHHHHHHHHHHHS--TT--CEEEEEEECEEECC
T ss_pred             cCCCCCCChHHHHHHHHHHHHHHHHHhc--CC--CceEEEeeceecCC
Confidence            222 336789999999999999999875  24  77777888777654

>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}

Probab=99.85  E-value=9.9e-22  Score=159.22  Aligned_cols=158  Identities=20%  Similarity=0.269  Sum_probs=120.7

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCC-HHHHHHHHHHHHhcCCC
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSS-LASVRNFASEYNIQHHQ   79 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~-~~~i~~~~~~~~~~~g~   79 (251)
                      |+||||||+|+||++++++|+++|++|++++|+..+..+          ...+.++.+|++| .+++.++++       +
T Consensus         1 M~ilItGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~----------~~~~~~~~~D~~d~~~~~~~~~~-------~   63 (219)
T 3dqp_A            1 MKIFIVGSTGRVGKSLLKSLSTTDYQIYAGARKVEQVPQ----------YNNVKAVHFDVDWTPEEMAKQLH-------G   63 (219)
T ss_dssp             CEEEEESTTSHHHHHHHHHHTTSSCEEEEEESSGGGSCC----------CTTEEEEECCTTSCHHHHHTTTT-------T
T ss_pred             CeEEEECCCCHHHHHHHHHHHHCCCEEEEEECCccchhh----------cCCceEEEecccCCHHHHHHHHc-------C
Confidence            689999999999999999999999999999998765322          1468999999999 888877654       6


Q ss_pred             eeEEEEcCCCCCCCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccccCCC
Q 025509           80 LNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKIND  159 (251)
Q Consensus        80 id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~  159 (251)
                      +|+||||||....          ..+++|+.++..+++++.    +.     +.++||++||..+....    ++.+   
T Consensus        64 ~d~vi~~ag~~~~----------~~~~~n~~~~~~l~~a~~----~~-----~~~~iv~~SS~~~~~~~----~~~e---  117 (219)
T 3dqp_A           64 MDAIINVSGSGGK----------SLLKVDLYGAVKLMQAAE----KA-----EVKRFILLSTIFSLQPE----KWIG---  117 (219)
T ss_dssp             CSEEEECCCCTTS----------SCCCCCCHHHHHHHHHHH----HT-----TCCEEEEECCTTTTCGG----GCCS---
T ss_pred             CCEEEECCcCCCC----------CcEeEeHHHHHHHHHHHH----Hh-----CCCEEEEECcccccCCC----cccc---
Confidence            9999999996431          156778888888887763    22     34699999997655411    1110   


Q ss_pred             CCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCccc
Q 025509          160 PSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIR  210 (251)
Q Consensus       160 ~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~  210 (251)
                       .+......|+.+|.+.+.+.+      ...|  ++++.++||++.++...
T Consensus       118 -~~~~~~~~Y~~sK~~~e~~~~------~~~~--i~~~ilrp~~v~g~~~~  159 (219)
T 3dqp_A          118 -AGFDALKDYYIAKHFADLYLT------KETN--LDYTIIQPGALTEEEAT  159 (219)
T ss_dssp             -HHHHHTHHHHHHHHHHHHHHH------HSCC--CEEEEEEECSEECSCCC
T ss_pred             -cccccccHHHHHHHHHHHHHH------hccC--CcEEEEeCceEecCCCC
Confidence             011236789999999988776      3556  89999999999987644

>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}

Probab=99.85  E-value=3.7e-21  Score=156.42  Aligned_cols=167  Identities=19%  Similarity=0.087  Sum_probs=125.6

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      |+||||||+|+||++++++|+++|++|++++|++.+....         ...+.++.+|++|.+++.++++       ++
T Consensus         5 ~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~---------~~~~~~~~~Dl~d~~~~~~~~~-------~~   68 (227)
T 3dhn_A            5 KKIVLIGASGFVGSALLNEALNRGFEVTAVVRHPEKIKIE---------NEHLKVKKADVSSLDEVCEVCK-------GA   68 (227)
T ss_dssp             CEEEEETCCHHHHHHHHHHHHTTTCEEEEECSCGGGCCCC---------CTTEEEECCCTTCHHHHHHHHT-------TC
T ss_pred             CEEEEEcCCchHHHHHHHHHHHCCCEEEEEEcCcccchhc---------cCceEEEEecCCCHHHHHHHhc-------CC
Confidence            5799999999999999999999999999999987653221         2578999999999999988776       58


Q ss_pred             eEEEEcCCCCCCCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccccCCCC
Q 025509           81 NILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDP  160 (251)
Q Consensus        81 d~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~  160 (251)
                      |+||||||....        ....+++|+.++..+++++.+.         +.++||++||.++..........     +
T Consensus        69 d~vi~~a~~~~~--------~~~~~~~n~~~~~~l~~~~~~~---------~~~~~v~~Ss~~~~~~~~~~~~~-----~  126 (227)
T 3dhn_A           69 DAVISAFNPGWN--------NPDIYDETIKVYLTIIDGVKKA---------GVNRFLMVGGAGSLFIAPGLRLM-----D  126 (227)
T ss_dssp             SEEEECCCC--------------CCSHHHHHHHHHHHHHHHT---------TCSEEEEECCSTTSEEETTEEGG-----G
T ss_pred             CEEEEeCcCCCC--------ChhHHHHHHHHHHHHHHHHHHh---------CCCEEEEeCChhhccCCCCCccc-----c
Confidence            999999985321        1125788999988888776442         24599999998765543322111     1


Q ss_pred             CCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCccc
Q 025509          161 SGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIR  210 (251)
Q Consensus       161 ~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~  210 (251)
                      .+..+...|+.+|.+.+.+.+.++.   ..|  ++++.+.||.+.++...
T Consensus       127 ~~~~p~~~Y~~sK~~~e~~~~~~~~---~~~--~~~~ilrp~~v~g~~~~  171 (227)
T 3dhn_A          127 SGEVPENILPGVKALGEFYLNFLMK---EKE--IDWVFFSPAADMRPGVR  171 (227)
T ss_dssp             TTCSCGGGHHHHHHHHHHHHHTGGG---CCS--SEEEEEECCSEEESCCC
T ss_pred             CCcchHHHHHHHHHHHHHHHHHHhh---ccC--ccEEEEeCCcccCCCcc
Confidence            1334456899999999987777765   346  88999999999887644

>1t2a_A GDP-mannose 4,6 dehydratase; structural genomics consortium, rossman-fold, short-chain dehydrogenase/reductase, SDR, structural genomics,lyase; HET: NDP GDP; 1.84A {Homo sapiens} SCOP: c.2.1.2

Probab=99.85  E-value=3.9e-20  Score=161.44  Aligned_cols=186  Identities=14%  Similarity=0.033  Sum_probs=134.5

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchh-----HHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHh
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAA-----GKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNI   75 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~-----~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~   75 (251)
                      |+||||||+|+||++++++|+++|++|++++|+...     ++...+..... .+..+.++.+|++|.+++.++++..  
T Consensus        25 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~l~~~~~~~-~~~~~~~~~~Dl~d~~~~~~~~~~~--  101 (375)
T 1t2a_A           25 NVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAH-IEGNMKLHYGDLTDSTCLVKIINEV--  101 (375)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTGGGC----------CEEEEECCTTCHHHHHHHHHHH--
T ss_pred             cEEEEECCCchHHHHHHHHHHHCCCEEEEEECCccccchhhHHHHhhhhccc-cCCCceEEEccCCCHHHHHHHHHhc--
Confidence            479999999999999999999999999999997543     11111111000 1346889999999999999988865  


Q ss_pred             cCCCeeEEEEcCCCCCCCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccc
Q 025509           76 QHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFD  155 (251)
Q Consensus        76 ~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~  155 (251)
                         ++|+||||||....  ..+.++++..+++|+.++..+++++.+...+      +.++||++||.+..... .+.+  
T Consensus       102 ---~~d~vih~A~~~~~--~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~------~~~~iv~~SS~~~~~~~-~~~~--  167 (375)
T 1t2a_A          102 ---KPTEIYNLGAQSHV--KISFDLAEYTADVDGVGTLRLLDAVKTCGLI------NSVKFYQASTSELYGKV-QEIP--  167 (375)
T ss_dssp             ---CCSEEEECCSCCCH--HHHHHSHHHHHHHHTHHHHHHHHHHHHTTCT------TTCEEEEEEEGGGTCSC-SSSS--
T ss_pred             ---CCCEEEECCCcccc--cccccCHHHHHHHHHHHHHHHHHHHHHhCCC------ccceEEEecchhhhCCC-CCCC--
Confidence               68999999996431  2235678889999999999999998765421      13699999997654321 1112  


Q ss_pred             cCCCCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcc
Q 025509          156 KINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNII  209 (251)
Q Consensus       156 ~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~  209 (251)
                       +++..+..+...|+.+|++.+.+++.++.+++     +.+..+.|+.+..|..
T Consensus       168 -~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~-----~~~~i~r~~~~~gp~~  215 (375)
T 1t2a_A          168 -QKETTPFYPRSPYGAAKLYAYWIVVNFREAYN-----LFAVNGILFNHESPRR  215 (375)
T ss_dssp             -BCTTSCCCCCSHHHHHHHHHHHHHHHHHHHHC-----CEEEEEEECCEECTTS
T ss_pred             -CCccCCCCCCChhHHHHHHHHHHHHHHHHHhC-----CCEEEEecccccCCCC
Confidence             23333444567899999999999999988763     6666688887776653

>1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2

Probab=99.85  E-value=3.6e-20  Score=158.98  Aligned_cols=184  Identities=15%  Similarity=0.022  Sum_probs=135.4

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      |+||||||+|+||++++++|+++|++|++++|+......  ..+........+.++.+|+++.+++.++++..     ++
T Consensus        15 ~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~--~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~-----~~   87 (335)
T 1rpn_A           15 RSALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDTR--WRLRELGIEGDIQYEDGDMADACSVQRAVIKA-----QP   87 (335)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCC--HHHHHTTCGGGEEEEECCTTCHHHHHHHHHHH-----CC
T ss_pred             CeEEEECCCChHHHHHHHHHHHCCCeEEEEeCCCccccc--cchhhccccCceEEEECCCCCHHHHHHHHHHc-----CC
Confidence            579999999999999999999999999999997654210  01111111346889999999999999988865     68


Q ss_pred             eEEEEcCCCCCCCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccccCCCC
Q 025509           81 NILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDP  160 (251)
Q Consensus        81 d~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~  160 (251)
                      |+|||+||....  ..+.++++..+++|+.++..+++++.+.-        ..++||++||.+.... ..+.+   +++.
T Consensus        88 d~Vih~A~~~~~--~~~~~~~~~~~~~n~~~~~~l~~a~~~~~--------~~~~~v~~SS~~v~g~-~~~~~---~~E~  153 (335)
T 1rpn_A           88 QEVYNLAAQSFV--GASWNQPVTTGVVDGLGVTHLLEAIRQFS--------PETRFYQASTSEMFGL-IQAER---QDEN  153 (335)
T ss_dssp             SEEEECCSCCCH--HHHTTSHHHHHHHHTHHHHHHHHHHHHHC--------TTSEEEEEEEGGGGCS-CSSSS---BCTT
T ss_pred             CEEEECccccch--hhhhhChHHHHHHHHHHHHHHHHHHHHhC--------CCCeEEEEeCHHHhCC-CCCCC---CCcc
Confidence            999999996432  22345678899999999999999876541        1269999999765432 11112   2233


Q ss_pred             CCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCccc
Q 025509          161 SGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIR  210 (251)
Q Consensus       161 ~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~  210 (251)
                      .+..+...|+.+|.+.+.+++.++.+++     +.+..+.|+.+..|...
T Consensus       154 ~~~~p~~~Y~~sK~~~e~~~~~~~~~~~-----~~~~i~r~~~v~Gp~~~  198 (335)
T 1rpn_A          154 TPFYPRSPYGVAKLYGHWITVNYRESFG-----LHASSGILFNHESPLRG  198 (335)
T ss_dssp             SCCCCCSHHHHHHHHHHHHHHHHHHHHC-----CCEEEEEECCEECTTSC
T ss_pred             cCCCCCChhHHHHHHHHHHHHHHHHHcC-----CcEEEEeeCcccCCCCC
Confidence            3444456899999999999999987763     56666899988877543

>2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens}

Probab=99.85  E-value=1e-20  Score=162.98  Aligned_cols=182  Identities=21%  Similarity=0.167  Sum_probs=132.7

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcC-------CEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHH
Q 025509            1 MDIVITGATSGIGTETARVLALRG-------VHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEY   73 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G-------~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~   73 (251)
                      |+||||||+|+||++++++|+++|       ++|++++|+......        .....+.++.+|+++.+++.++++  
T Consensus        15 ~~vlVtGa~G~iG~~l~~~L~~~g~~~~r~~~~V~~~~r~~~~~~~--------~~~~~~~~~~~Dl~d~~~~~~~~~--   84 (342)
T 2hrz_A           15 MHIAIIGAAGMVGRKLTQRLVKDGSLGGKPVEKFTLIDVFQPEAPA--------GFSGAVDARAADLSAPGEAEKLVE--   84 (342)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHHCEETTEEEEEEEEEESSCCCCCT--------TCCSEEEEEECCTTSTTHHHHHHH--
T ss_pred             CEEEEECCCcHHHHHHHHHHHhcCCcccCCCceEEEEEccCCcccc--------ccCCceeEEEcCCCCHHHHHHHHh--
Confidence            479999999999999999999999       899999997643211        114568899999999999888775  


Q ss_pred             HhcCCCeeEEEEcCCCCCCCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcc
Q 025509           74 NIQHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIR  153 (251)
Q Consensus        74 ~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~  153 (251)
                          +++|+||||||...   ..+.++++..+++|+.++..+++++.+...+.    ++.++||++||.+..... ...+
T Consensus        85 ----~~~d~vih~A~~~~---~~~~~~~~~~~~~nv~g~~~l~~~~~~~~~~~----~~~~~iv~~SS~~~~~~~-~~~~  152 (342)
T 2hrz_A           85 ----ARPDVIFHLAAIVS---GEAELDFDKGYRINLDGTRYLFDAIRIANGKD----GYKPRVVFTSSIAVFGAP-LPYP  152 (342)
T ss_dssp             ----TCCSEEEECCCCCH---HHHHHCHHHHHHHHTHHHHHHHHHHHHHHHHH----CCCCEEEEEEEGGGCCSS-CCSS
T ss_pred             ----cCCCEEEECCccCc---ccccccHHHHHHHHHHHHHHHHHHHHhccccc----CCCcEEEEeCchHhhCCC-CCCC
Confidence                37999999999643   22456788999999999999999987754321    014699999998654321 1112


Q ss_pred             cccCCCCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEee--CCcccCC
Q 025509          154 FDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVH--PGAIATN  207 (251)
Q Consensus       154 ~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~--Pg~v~t~  207 (251)
                         ++++.+..+...|+.+|++.+.+++.++.+..-....++++.|+  ||.+.++
T Consensus       153 ---~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~ir~~~v~g~pg~~~~~  205 (342)
T 2hrz_A          153 ---IPDEFHTTPLTSYGTQKAICELLLSDYSRRGFFDGIGIRLPTICIRPGKPNAA  205 (342)
T ss_dssp             ---BCTTCCCCCSSHHHHHHHHHHHHHHHHHHTTSCEEEEEEECEETTCCSSCCCS
T ss_pred             ---cCCCCCCCCcchHHHHHHHHHHHHHHHHHhcCCCceeEEeeeEEecCCCCcch
Confidence               23333444567899999999999988887642111226666666  7765443

>4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis}

Probab=99.85  E-value=1.3e-20  Score=162.54  Aligned_cols=185  Identities=14%  Similarity=0.079  Sum_probs=133.3

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcC--CEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCC
Q 025509            1 MDIVITGATSGIGTETARVLALRG--VHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHH   78 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G--~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g   78 (251)
                      |+||||||+|+||++++++|+++|  ++|+..+|.....  ....+........+.++.+|++|.+++.++++..     
T Consensus        25 ~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~~~~~~~--~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~-----   97 (346)
T 4egb_A           25 MNILVTGGAGFIGSNFVHYMLQSYETYKIINFDALTYSG--NLNNVKSIQDHPNYYFVKGEIQNGELLEHVIKER-----   97 (346)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHHCTTEEEEEEECCCTTC--CGGGGTTTTTCTTEEEEECCTTCHHHHHHHHHHH-----
T ss_pred             CeEEEECCccHHHHHHHHHHHhhCCCcEEEEEecccccc--chhhhhhhccCCCeEEEEcCCCCHHHHHHHHhhc-----
Confidence            479999999999999999999999  6787777754211  0111211122357999999999999999988864     


Q ss_pred             CeeEEEEcCCCCCCCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccccCC
Q 025509           79 QLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKIN  158 (251)
Q Consensus        79 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~  158 (251)
                      ++|+|||+||....  ..+.++++..+++|+.++..+++++.+.         +.++||++||.+.........++   +
T Consensus        98 ~~d~Vih~A~~~~~--~~~~~~~~~~~~~nv~~~~~ll~a~~~~---------~~~~~v~~SS~~vy~~~~~~~~~---~  163 (346)
T 4egb_A           98 DVQVIVNFAAESHV--DRSIENPIPFYDTNVIGTVTLLELVKKY---------PHIKLVQVSTDEVYGSLGKTGRF---T  163 (346)
T ss_dssp             TCCEEEECCCCC-----------CHHHHHHTHHHHHHHHHHHHS---------TTSEEEEEEEGGGGCCCCSSCCB---C
T ss_pred             CCCEEEECCcccch--hhhhhCHHHHHHHHHHHHHHHHHHHHhc---------CCCEEEEeCchHHhCCCCcCCCc---C
Confidence            69999999997542  2245667889999999999988887544         24689999997654432222222   3


Q ss_pred             CCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccC
Q 025509          159 DPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  211 (251)
Q Consensus       159 ~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  211 (251)
                      +..+..+...|+.+|.+.+.+++.++.+.   |  ++++.+.|+.+.+|....
T Consensus       164 E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---g--~~~~ilRp~~v~G~~~~~  211 (346)
T 4egb_A          164 EETPLAPNSPYSSSKASADMIALAYYKTY---Q--LPVIVTRCSNNYGPYQYP  211 (346)
T ss_dssp             TTSCCCCCSHHHHHHHHHHHHHHHHHHHH---C--CCEEEEEECEEESTTCCT
T ss_pred             CCCCCCCCChhHHHHHHHHHHHHHHHHHh---C--CCEEEEeecceeCcCCCc
Confidence            33344556789999999999999998876   4  778889999999987643

>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*

Probab=99.85  E-value=2.8e-20  Score=160.52  Aligned_cols=164  Identities=14%  Similarity=0.071  Sum_probs=130.2

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      |+||||||+|+||++++++|+++|++|++++|+...              ..+.++.+|+++.+++.++++       ++
T Consensus        20 ~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~--------------~~~~~~~~Dl~d~~~~~~~~~-------~~   78 (347)
T 4id9_A           20 HMILVTGSAGRVGRAVVAALRTQGRTVRGFDLRPSG--------------TGGEEVVGSLEDGQALSDAIM-------GV   78 (347)
T ss_dssp             -CEEEETTTSHHHHHHHHHHHHTTCCEEEEESSCCS--------------SCCSEEESCTTCHHHHHHHHT-------TC
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCCC--------------CCccEEecCcCCHHHHHHHHh-------CC
Confidence            579999999999999999999999999999998653              357889999999999887765       78


Q ss_pred             eEEEEcCCCCCCCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccccCCCC
Q 025509           81 NILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDP  160 (251)
Q Consensus        81 d~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~  160 (251)
                      |+|||+|+...    .+.++++..+++|+.++..+++++.+.         +.++||++||.+......  ....++.+.
T Consensus        79 d~vih~A~~~~----~~~~~~~~~~~~nv~~~~~ll~a~~~~---------~~~~~V~~SS~~vyg~~~--~~~~~~~E~  143 (347)
T 4id9_A           79 SAVLHLGAFMS----WAPADRDRMFAVNVEGTRRLLDAASAA---------GVRRFVFASSGEVYPENR--PEFLPVTED  143 (347)
T ss_dssp             SEEEECCCCCC----SSGGGHHHHHHHHTHHHHHHHHHHHHT---------TCSEEEEEEEGGGTTTTS--CSSSSBCTT
T ss_pred             CEEEECCcccC----cchhhHHHHHHHHHHHHHHHHHHHHHc---------CCCeEEEECCHHHhCCCC--CCCCCcCCC
Confidence            99999999643    244556899999999999998887542         346999999976543210  112223444


Q ss_pred             CCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccc
Q 025509          161 SGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIA  205 (251)
Q Consensus       161 ~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~  205 (251)
                      .+..+...|+.+|.+.+.+++.++.+.   |  ++++.+.|+.+.
T Consensus       144 ~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~--~~~~ilRp~~v~  183 (347)
T 4id9_A          144 HPLCPNSPYGLTKLLGEELVRFHQRSG---A--METVILRFSHTQ  183 (347)
T ss_dssp             SCCCCCSHHHHHHHHHHHHHHHHHHHS---S--SEEEEEEECEEE
T ss_pred             CCCCCCChHHHHHHHHHHHHHHHHHhc---C--CceEEEccceEe
Confidence            455667799999999999999888875   5  888889999998

>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori}

Probab=99.84  E-value=1.9e-20  Score=162.74  Aligned_cols=178  Identities=16%  Similarity=0.077  Sum_probs=127.6

Q ss_pred             CEEEEECCCChhHHHHHHHHHH--cCCEEEEEecCchhHHHHHHH---H--HhhCCCCceEEEEecCCCHHHHHHHHHHH
Q 025509            1 MDIVITGATSGIGTETARVLAL--RGVHVVMGVRDIAAGKDVKET---I--VKEIPSAKVDAMELDLSSLASVRNFASEY   73 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~--~G~~Vi~~~r~~~~~~~~~~~---~--~~~~~~~~v~~~~~D~~~~~~i~~~~~~~   73 (251)
                      |+||||||+|+||++++++|++  .|++|++++|+..........   +  .....+..+.++.+|+++.+++.++    
T Consensus        11 ~~vlVTGatG~IG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~----   86 (362)
T 3sxp_A           11 QTILITGGAGFVGSNLAFHFQENHPKAKVVVLDKFRSNTLFSNNRPSSLGHFKNLIGFKGEVIAADINNPLDLRRL----   86 (362)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHCTTSEEEEEECCCCC-------CCCCCCGGGGTTCCSEEEECCTTCHHHHHHH----
T ss_pred             CEEEEECCCCHHHHHHHHHHHhhCCCCeEEEEECCCccccccccchhhhhhhhhccccCceEEECCCCCHHHHHHh----
Confidence            5799999999999999999999  899999999976421100000   0  0111244679999999999988876    


Q ss_pred             HhcCCCeeEEEEcCCCCCCCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcc
Q 025509           74 NIQHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIR  153 (251)
Q Consensus        74 ~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~  153 (251)
                        ...++|+||||||...    .+.++++..+++|+.++..+++++...          +++||++||.+... .... +
T Consensus        87 --~~~~~D~vih~A~~~~----~~~~~~~~~~~~Nv~gt~~ll~aa~~~----------~~~~V~~SS~~vyg-~~~~-~  148 (362)
T 3sxp_A           87 --EKLHFDYLFHQAAVSD----TTMLNQELVMKTNYQAFLNLLEIARSK----------KAKVIYASSAGVYG-NTKA-P  148 (362)
T ss_dssp             --TTSCCSEEEECCCCCG----GGCCCHHHHHHHHTHHHHHHHHHHHHT----------TCEEEEEEEGGGGC-SCCS-S
T ss_pred             --hccCCCEEEECCccCC----ccccCHHHHHHHHHHHHHHHHHHHHHc----------CCcEEEeCcHHHhC-CCCC-C
Confidence              2348999999999533    255778999999999999999887322          35699999955432 2222 2


Q ss_pred             cccCCCCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCccc
Q 025509          154 FDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIR  210 (251)
Q Consensus       154 ~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~  210 (251)
                         +++..+..+...|+.+|.+.+.+++.++.+       +.+..|.|+.+..|...
T Consensus       149 ---~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~-------~~~~~lR~~~v~Gp~~~  195 (362)
T 3sxp_A          149 ---NVVGKNESPENVYGFSKLCMDEFVLSHSND-------NVQVGLRYFNVYGPREF  195 (362)
T ss_dssp             ---BCTTSCCCCSSHHHHHHHHHHHHHHHTTTT-------SCEEEEEECSEESTTCG
T ss_pred             ---CCCCCCCCCCChhHHHHHHHHHHHHHHhcc-------CCEEEEEeCceeCcCCC
Confidence               333334455678999999999988887765       23445888888877654

>4f6c_A AUSA reductase domain protein; thioester reductase, oxidoreductase; 2.81A {Staphylococcus aureus}

Probab=99.84  E-value=2.7e-20  Score=165.42  Aligned_cols=181  Identities=17%  Similarity=0.165  Sum_probs=129.7

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCch---hHHHHHHHHHhhCC-------CCceEEEEecCCCHHHHHHHH
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIA---AGKDVKETIVKEIP-------SAKVDAMELDLSSLASVRNFA   70 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~---~~~~~~~~~~~~~~-------~~~v~~~~~D~~~~~~i~~~~   70 (251)
                      |+||||||+|+||++++++|++.|++|++++|+..   ..+.+.+.+.+.++       ..++.++.+|+++.+++.   
T Consensus        70 ~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~---  146 (427)
T 4f6c_A           70 GNTLLTGATGFLGAYLIEALQGYSHRIYCFIRADNEEIAWYKLMTNLNDYFSEETVEMMLSNIEVIVGDFECMDDVV---  146 (427)
T ss_dssp             EEEEEECTTSHHHHHHHHHHTTTEEEEEEEEECSSHHHHHHHHHHHHHHHSCHHHHHHHHTTEEEEEECC---CCCC---
T ss_pred             CEEEEecCCcHHHHHHHHHHHcCCCEEEEEECCCChHHHHHHHHHHHHHhccccccccccCceEEEeCCCCCcccCC---
Confidence            37999999999999999999999999999999877   33344443332211       357999999999987777   


Q ss_pred             HHHHhcCCCeeEEEEcCCCCCCCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccc--
Q 025509           71 SEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAY--  148 (251)
Q Consensus        71 ~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~--  148 (251)
                           ..+++|+||||||...     ..++++..+++|+.++..+++++.+    .      ..+||++||... ...  
T Consensus       147 -----~~~~~d~Vih~A~~~~-----~~~~~~~~~~~Nv~g~~~l~~aa~~----~------~~~~v~~SS~~~-G~~~~  205 (427)
T 4f6c_A          147 -----LPENMDTIIHAGARTD-----HFGDDDEFEKVNVQGTVDVIRLAQQ----H------HARLIYVSTISV-GTYFD  205 (427)
T ss_dssp             -----CSSCCSEEEECCCCC------------CHHHHHHHHHHHHHHHHHH----T------TCEEEEEEEGGG-GSEEC
T ss_pred             -----CcCCCCEEEECCcccC-----CCCCHHHHHHHHHHHHHHHHHHHHh----c------CCcEEEECchHh-CCCcc
Confidence                 4568999999999653     2356788999999999999999876    1      359999999876 211  


Q ss_pred             --cCCcccccCCCCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccC
Q 025509          149 --HEGIRFDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  211 (251)
Q Consensus       149 --~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  211 (251)
                        ....++.+-+...+......|+.+|.+.+.+++.++.    .|  ++++.|.||.|.++....
T Consensus       206 ~~~~~~~~~E~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~g--~~~~ivRpg~v~G~~~~~  264 (427)
T 4f6c_A          206 IDTEDVTFSEADVYKGQLLTSPYTRSKFYSELKVLEAVN----NG--LDGRIVRVGNLTSPYNGR  264 (427)
T ss_dssp             SSCSCCEECTTCSCSSCCCCSHHHHHHHHHHHHHHHHHH----TT--CCEEEEEECCEESCSSSC
T ss_pred             CCCCCccccccccccCCCCCCchHHHHHHHHHHHHHHHH----cC--CCEEEEeCCeeecCCCCC
Confidence              1122333222222234667999999999999888653    56  889999999999887654

>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A*

Probab=99.84  E-value=3.3e-20  Score=162.35  Aligned_cols=179  Identities=17%  Similarity=0.115  Sum_probs=133.4

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      |+||||||+|+||++++++|+++|++|++++|+.......      .  ...+.++.+|+++.+++.++++       ++
T Consensus        30 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~------~--~~~v~~~~~Dl~d~~~~~~~~~-------~~   94 (379)
T 2c5a_A           30 LKISITGAGGFIASHIARRLKHEGHYVIASDWKKNEHMTE------D--MFCDEFHLVDLRVMENCLKVTE-------GV   94 (379)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCSSSCG------G--GTCSEEEECCTTSHHHHHHHHT-------TC
T ss_pred             CeEEEECCccHHHHHHHHHHHHCCCeEEEEECCCccchhh------c--cCCceEEECCCCCHHHHHHHhC-------CC
Confidence            5799999999999999999999999999999986542211      0  2357889999999999887764       68


Q ss_pred             eEEEEcCCCCCCCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCC----ccccc
Q 025509           81 NILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEG----IRFDK  156 (251)
Q Consensus        81 d~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~----~~~~~  156 (251)
                      |+|||+||.... .....++++..+++|+.++..+++++.+.         +.++||++||.+........    .++++
T Consensus        95 d~Vih~A~~~~~-~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~---------~~~~~V~~SS~~v~~~~~~~~~~~~~~~E  164 (379)
T 2c5a_A           95 DHVFNLAADMGG-MGFIQSNHSVIMYNNTMISFNMIEAARIN---------GIKRFFYASSACIYPEFKQLETTNVSLKE  164 (379)
T ss_dssp             SEEEECCCCCCC-HHHHTTCHHHHHHHHHHHHHHHHHHHHHT---------TCSEEEEEEEGGGSCGGGSSSSSSCEECG
T ss_pred             CEEEECceecCc-ccccccCHHHHHHHHHHHHHHHHHHHHHc---------CCCEEEEEeehheeCCCCCCCccCCCcCc
Confidence            999999996432 11124568889999999999999987532         24699999997654321110    11111


Q ss_pred             CCCCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCccc
Q 025509          157 INDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIR  210 (251)
Q Consensus       157 ~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~  210 (251)
                      .. ..+..+...|+.+|.+.+.+++.++.++   |  ++++.|.||.+.++...
T Consensus       165 ~~-~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---g--i~~~ilrp~~v~G~~~~  212 (379)
T 2c5a_A          165 SD-AWPAEPQDAFGLEKLATEELCKHYNKDF---G--IECRIGRFHNIYGPFGT  212 (379)
T ss_dssp             GG-GSSBCCSSHHHHHHHHHHHHHHHHHHHH---C--CEEEEEEECCEECTTSC
T ss_pred             cc-CCCCCCCChhHHHHHHHHHHHHHHHHHH---C--CCEEEEEeCceeCcCCC
Confidence            11 0023345689999999999999998775   4  88999999999998654

>2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A

Probab=99.83  E-value=8.9e-21  Score=163.06  Aligned_cols=184  Identities=17%  Similarity=0.110  Sum_probs=124.1

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHH--HHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCC
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVK--ETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHH   78 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~--~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g   78 (251)
                      |+||||||+|+||++++++|+++|++|+++.|+.+......  ..+. .  ...+.++.+|+++.+++.++++       
T Consensus        10 ~~vlVTGatGfIG~~l~~~Ll~~G~~V~~~~r~~~~~~~~~~~~~~~-~--~~~~~~~~~Dl~d~~~~~~~~~-------   79 (338)
T 2rh8_A           10 KTACVVGGTGFVASLLVKLLLQKGYAVNTTVRDPDNQKKVSHLLELQ-E--LGDLKIFRADLTDELSFEAPIA-------   79 (338)
T ss_dssp             CEEEEECTTSHHHHHHHHHHHHTTCEEEEEESCTTCTTTTHHHHHHG-G--GSCEEEEECCTTTSSSSHHHHT-------
T ss_pred             CEEEEECCchHHHHHHHHHHHHCCCEEEEEEcCcchhhhHHHHHhcC-C--CCcEEEEecCCCChHHHHHHHc-------
Confidence            57999999999999999999999999999888765322111  1221 1  2458889999999888877664       


Q ss_pred             CeeEEEEcCCCCCCCCcCCchhh-HHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCC---ccc
Q 025509           79 QLNILINNAGIMGTPFMLSKDNI-ELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEG---IRF  154 (251)
Q Consensus        79 ~id~lv~~ag~~~~~~~~~~~~~-~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~---~~~  154 (251)
                      ++|+|||+|+....    ..++. ++.+++|+.++..+++++.+..        +.++||++||.++.......   .+.
T Consensus        80 ~~D~Vih~A~~~~~----~~~~~~~~~~~~nv~gt~~ll~aa~~~~--------~v~r~V~~SS~~~~~~~~~~~~~~~~  147 (338)
T 2rh8_A           80 GCDFVFHVATPVHF----ASEDPENDMIKPAIQGVVNVMKACTRAK--------SVKRVILTSSAAAVTINQLDGTGLVV  147 (338)
T ss_dssp             TCSEEEEESSCCCC-------------CHHHHHHHHHHHHHHHHCT--------TCCEEEEECCHHHHHHHHHTCSCCCC
T ss_pred             CCCEEEEeCCccCC----CCCCcHHHHHHHHHHHHHHHHHHHHHcC--------CcCEEEEEecHHHeecCCcCCCCccc
Confidence            58999999985421    22222 4589999999999999886542        13699999998754332111   112


Q ss_pred             ccCCCC-----CCC-CcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccC
Q 025509          155 DKINDP-----SGY-NGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  211 (251)
Q Consensus       155 ~~~~~~-----~~~-~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  211 (251)
                      ++-...     .+. +....|+.||.+.+.+++.++.+.   |  ++++.|.|+.+.+|....
T Consensus       148 ~E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---g--i~~~~lrp~~v~Gp~~~~  205 (338)
T 2rh8_A          148 DEKNWTDIEFLTSAKPPTWGYPASKTLAEKAAWKFAEEN---N--IDLITVIPTLMAGSSLTS  205 (338)
T ss_dssp             CTTTTTCC-------CCCCCCTTSCCHHHHHHHHHHHHH---T--CCEEEEEECEEESCCSSS
T ss_pred             ChhhccchhhccccCCccchHHHHHHHHHHHHHHHHHHc---C--CcEEEEeCCceECCCCCC
Confidence            111100     011 112269999999888777766543   5  888899999999997543

>2p4h_X Vestitone reductase; NADPH-dependent reductase, isoflavonoid, plant protein; 1.40A {Medicago sativa}

Probab=99.83  E-value=1e-20  Score=161.43  Aligned_cols=184  Identities=18%  Similarity=0.129  Sum_probs=121.2

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEec-CchhHHHHHHHHHhhCC--CCceEEEEecCCCHHHHHHHHHHHHhcC
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVR-DIAAGKDVKETIVKEIP--SAKVDAMELDLSSLASVRNFASEYNIQH   77 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r-~~~~~~~~~~~~~~~~~--~~~v~~~~~D~~~~~~i~~~~~~~~~~~   77 (251)
                      |+||||||+|+||++++++|+++|++|+++.| +.+...+. ..+. ..+  ...+.++.+|++|.+++.++++      
T Consensus         2 k~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~-~~~~-~~~~~~~~~~~~~~Dl~d~~~~~~~~~------   73 (322)
T 2p4h_X            2 GRVCVTGGTGFLGSWIIKSLLENGYSVNTTIRADPERKRDV-SFLT-NLPGASEKLHFFNADLSNPDSFAAAIE------   73 (322)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTCEEEEECCCC----CCC-HHHH-TSTTHHHHEEECCCCTTCGGGGHHHHT------
T ss_pred             CEEEEECChhHHHHHHHHHHHHCCCEEEEEEeCCccchhHH-HHHH-hhhccCCceEEEecCCCCHHHHHHHHc------
Confidence            68999999999999999999999999999888 54321111 0111 111  1257888999999998887765      


Q ss_pred             CCeeEEEEcCCCCCCCCcCCchh-hHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCC-cccc
Q 025509           78 HQLNILINNAGIMGTPFMLSKDN-IELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEG-IRFD  155 (251)
Q Consensus        78 g~id~lv~~ag~~~~~~~~~~~~-~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~-~~~~  155 (251)
                       .+|+|||+|+..    ..+.++ +++.+++|+.++..+++++.+..        +.++||++||.++....... .+++
T Consensus        74 -~~d~vih~A~~~----~~~~~~~~~~~~~~nv~gt~~l~~aa~~~~--------~~~~iV~~SS~~~~~~~~~~~~~~~  140 (322)
T 2p4h_X           74 -GCVGIFHTASPI----DFAVSEPEEIVTKRTVDGALGILKACVNSK--------TVKRFIYTSSGSAVSFNGKDKDVLD  140 (322)
T ss_dssp             -TCSEEEECCCCC------------CHHHHHHHHHHHHHHHHHTTCS--------SCCEEEEEEEGGGTSCSSSCCSEEC
T ss_pred             -CCCEEEEcCCcc----cCCCCChHHHHHHHHHHHHHHHHHHHHhcC--------CccEEEEeccHHHcccCCCCCeecC
Confidence             579999999742    122222 35689999999999999876541        24699999998765432211 1111


Q ss_pred             cCCCCC-----C-CCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCccc
Q 025509          156 KINDPS-----G-YNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIR  210 (251)
Q Consensus       156 ~~~~~~-----~-~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~  210 (251)
                      +-....     + .+....|+.||.+.+.+++.++.+   .|  ++++.++||++.+|+..
T Consensus       141 e~~~~~~~~~~~~~p~~~~Y~~sK~~~e~~~~~~~~~---~g--i~~~~lrp~~v~g~~~~  196 (322)
T 2p4h_X          141 ESDWSDVDLLRSVKPFGWNYAVSKTLAEKAVLEFGEQ---NG--IDVVTLILPFIVGRFVC  196 (322)
T ss_dssp             TTCCCCHHHHHHHCCTTHHHHHHHHHHHHHHHHHHHH---TT--CCEEEEEECEEESCCCS
T ss_pred             CccccchhhhcccCcccccHHHHHHHHHHHHHHHHHh---cC--CcEEEEcCCceECCCCC
Confidence            110000     0 011126999999876665544432   46  88999999999999754

>2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris}

Probab=99.83  E-value=3.1e-20  Score=157.74  Aligned_cols=174  Identities=15%  Similarity=0.068  Sum_probs=132.7

Q ss_pred             CEEEEECCCChhHHHHHHHHHHc--CCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCC
Q 025509            1 MDIVITGATSGIGTETARVLALR--GVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHH   78 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~--G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g   78 (251)
                      |+||||||+|+||++++++|+++  |++|++++|+.....     +.     ..+.++.+|+++.+++.+++++.     
T Consensus         3 ~~vlVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~-----~~-----~~~~~~~~D~~d~~~~~~~~~~~-----   67 (312)
T 2yy7_A            3 PKILIIGACGQIGTELTQKLRKLYGTENVIASDIRKLNTD-----VV-----NSGPFEVVNALDFNQIEHLVEVH-----   67 (312)
T ss_dssp             CCEEEETTTSHHHHHHHHHHHHHHCGGGEEEEESCCCSCH-----HH-----HSSCEEECCTTCHHHHHHHHHHT-----
T ss_pred             ceEEEECCccHHHHHHHHHHHHhCCCCEEEEEcCCCcccc-----cc-----CCCceEEecCCCHHHHHHHHhhc-----
Confidence            57999999999999999999998  899999999765521     11     13678899999999999888753     


Q ss_pred             CeeEEEEcCCCCCCCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccccCC
Q 025509           79 QLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKIN  158 (251)
Q Consensus        79 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~  158 (251)
                      ++|+|||+||....   ...++++..+++|+.++..+++++.+.         +.++||++||.+.........+   +.
T Consensus        68 ~~d~vih~a~~~~~---~~~~~~~~~~~~n~~~~~~l~~~~~~~---------~~~~~v~~SS~~~~~~~~~~~~---~~  132 (312)
T 2yy7_A           68 KITDIYLMAALLSA---TAEKNPAFAWDLNMNSLFHVLNLAKAK---------KIKKIFWPSSIAVFGPTTPKEN---TP  132 (312)
T ss_dssp             TCCEEEECCCCCHH---HHHHCHHHHHHHHHHHHHHHHHHHHTT---------SCSEEECCEEGGGCCTTSCSSS---BC
T ss_pred             CCCEEEECCccCCC---chhhChHHHHHHHHHHHHHHHHHHHHc---------CCCEEEEeccHHHhCCCCCCCC---cc
Confidence            69999999996432   123567889999999999998887542         2469999999765542211111   12


Q ss_pred             CCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcc
Q 025509          159 DPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNII  209 (251)
Q Consensus       159 ~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~  209 (251)
                      +..+..+...|+.+|.+.+.+++.++.++   |  ++++.+.||.+.++..
T Consensus       133 e~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~--~~~~~lrp~~v~g~~~  178 (312)
T 2yy7_A          133 QYTIMEPSTVYGISKQAGERWCEYYHNIY---G--VDVRSIRYPGLISWST  178 (312)
T ss_dssp             SSCBCCCCSHHHHHHHHHHHHHHHHHHHH---C--CEEECEEECEEECSSS
T ss_pred             ccCcCCCCchhHHHHHHHHHHHHHHHHhc---C--CcEEEEeCCeEecCCC
Confidence            22233446789999999999999988776   5  8899999999988653

>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}

Probab=99.82  E-value=8.9e-20  Score=158.88  Aligned_cols=177  Identities=11%  Similarity=0.041  Sum_probs=132.6

Q ss_pred             CEEEEECCCChhHHHHHHHHHHc-CCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCC-CHHHHHHHHHHHHhcCC
Q 025509            1 MDIVITGATSGIGTETARVLALR-GVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLS-SLASVRNFASEYNIQHH   78 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~-G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~-~~~~i~~~~~~~~~~~g   78 (251)
                      |+||||||+|+||++++++|+++ |++|++++|+.........       ...+.++.+|++ +.+++.++++       
T Consensus        25 ~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~-------~~~v~~~~~Dl~~d~~~~~~~~~-------   90 (372)
T 3slg_A           25 KKVLILGVNGFIGHHLSKRILETTDWEVFGMDMQTDRLGDLVK-------HERMHFFEGDITINKEWVEYHVK-------   90 (372)
T ss_dssp             CEEEEESCSSHHHHHHHHHHHHHSSCEEEEEESCCTTTGGGGG-------STTEEEEECCTTTCHHHHHHHHH-------
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCCEEEEEeCChhhhhhhcc-------CCCeEEEeCccCCCHHHHHHHhc-------
Confidence            57999999999999999999998 9999999998765433211       357999999999 9999988776       


Q ss_pred             CeeEEEEcCCCCCCCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccccCC
Q 025509           79 QLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKIN  158 (251)
Q Consensus        79 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~  158 (251)
                      ++|+|||+|+...+  ....++..+.+++|+.++..+++++...         + .+||++||.+.. +...+.++.+-.
T Consensus        91 ~~d~Vih~A~~~~~--~~~~~~~~~~~~~nv~~~~~ll~a~~~~---------~-~~~v~~SS~~vy-g~~~~~~~~e~~  157 (372)
T 3slg_A           91 KCDVILPLVAIATP--ATYVKQPLRVFELDFEANLPIVRSAVKY---------G-KHLVFPSTSEVY-GMCADEQFDPDA  157 (372)
T ss_dssp             HCSEEEECBCCCCH--HHHHHCHHHHHHHHTTTTHHHHHHHHHH---------T-CEEEEECCGGGG-BSCCCSSBCTTT
T ss_pred             cCCEEEEcCccccH--HHHhhCHHHHHHHHHHHHHHHHHHHHHh---------C-CcEEEeCcHHHh-CCCCCCCCCccc
Confidence            58999999997442  1234567788999999998888877544         2 599999996543 322222332211


Q ss_pred             CC---CCC-CcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCccc
Q 025509          159 DP---SGY-NGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIR  210 (251)
Q Consensus       159 ~~---~~~-~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~  210 (251)
                      .+   .+. .+...|+.+|.+.+.+++.++.+    |  ++++.+.|+.+.+|...
T Consensus       158 ~~~~~~p~~~p~~~Y~~sK~~~E~~~~~~~~~----g--~~~~ilRp~~v~G~~~~  207 (372)
T 3slg_A          158 SALTYGPINKPRWIYACSKQLMDRVIWGYGME----G--LNFTLFRPFNWIGPGLD  207 (372)
T ss_dssp             CCEEECCTTCTTHHHHHHHHHHHHHHHHHHTT----T--CEEEEEEECSEECSSCC
T ss_pred             cccccCCCCCCCCcHHHHHHHHHHHHHHHHHC----C--CCEEEEccccccCCCcc
Confidence            11   011 24458999999999988888765    5  88889999999988754

>2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A

Probab=99.82  E-value=1.3e-19  Score=155.94  Aligned_cols=178  Identities=15%  Similarity=0.026  Sum_probs=129.7

Q ss_pred             CEEEEECCCChhHHHHHHHHHHc-CCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCH-HHHHHHHHHHHhcCC
Q 025509            1 MDIVITGATSGIGTETARVLALR-GVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSL-ASVRNFASEYNIQHH   78 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~-G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~-~~i~~~~~~~~~~~g   78 (251)
                      |+||||||+|+||++++++|+++ |++|++++|+..+.+..       .....+.++.+|+++. +.+.++++       
T Consensus         1 m~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~-------~~~~~~~~~~~D~~~~~~~~~~~~~-------   66 (345)
T 2bll_A            1 MRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRF-------LNHPHFHFVEGDISIHSEWIEYHVK-------   66 (345)
T ss_dssp             CEEEEETCSSHHHHHHHHHHHHSTTCEEEEEESCCGGGGGG-------TTCTTEEEEECCTTTCSHHHHHHHH-------
T ss_pred             CeEEEECCCcHHHHHHHHHHHHhCCCEEEEEeCCcchHHHh-------hcCCCeEEEeccccCcHHHHHhhcc-------
Confidence            68999999999999999999998 89999999987654321       1134688999999984 56666654       


Q ss_pred             CeeEEEEcCCCCCCCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccccCC
Q 025509           79 QLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKIN  158 (251)
Q Consensus        79 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~  158 (251)
                      ++|+|||+||...+.  ...++++..+++|+.++..+++++.+.         + ++||++||.+.... ..+.++++-.
T Consensus        67 ~~d~vih~A~~~~~~--~~~~~~~~~~~~n~~~~~~l~~~~~~~---------~-~~~v~~SS~~v~g~-~~~~~~~e~~  133 (345)
T 2bll_A           67 KCDVVLPLVAIATPI--EYTRNPLRVFELDFEENLRIIRYCVKY---------R-KRIIFPSTSEVYGM-CSDKYFDEDH  133 (345)
T ss_dssp             HCSEEEECBCCCCHH--HHHHSHHHHHHHHTHHHHHHHHHHHHT---------T-CEEEEECCGGGGBT-CCCSSBCTTT
T ss_pred             CCCEEEEcccccCcc--chhcCHHHHHHHHHHHHHHHHHHHHHh---------C-CeEEEEecHHHcCC-CCCCCcCCcc
Confidence            579999999964321  123467789999999998888876432         2 69999999765432 1222222211


Q ss_pred             CC---CCC-CcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCccc
Q 025509          159 DP---SGY-NGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIR  210 (251)
Q Consensus       159 ~~---~~~-~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~  210 (251)
                      ..   .+. .....|+.+|.+.+.+++.++.+.   |  ++++.+.||.+.++...
T Consensus       134 ~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~--~~~~ilrp~~v~G~~~~  184 (345)
T 2bll_A          134 SNLIVGPVNKPRWIYSVSKQLLDRVIWAYGEKE---G--LQFTLFRPFNWMGPRLD  184 (345)
T ss_dssp             CCCBCCCTTCGGGHHHHHHHHHHHHHHHHHHHH---C--CCEEEEEECSEECSSCC
T ss_pred             cccccCcccCcccccHHHHHHHHHHHHHHHHhc---C--CCEEEEcCCcccCCCcc
Confidence            10   011 234489999999999999998776   4  78888999999988754

>1z45_A GAL10 bifunctional protein; epimerase, mutarotase, metabolism, isomerase; HET: GAL NAD GUD; 1.85A {Saccharomyces cerevisiae} SCOP: b.30.5.4 c.2.1.2

Probab=99.82  E-value=3.4e-19  Score=167.58  Aligned_cols=188  Identities=16%  Similarity=0.097  Sum_probs=134.1

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      |+||||||+|+||++++++|+++|++|++++|+.....+..+.+.... ...+.++.+|+++.+++.+++++.     ++
T Consensus        12 ~~ilVTGatG~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~-~~~v~~v~~Dl~d~~~l~~~~~~~-----~~   85 (699)
T 1z45_A           12 KIVLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVARLEVLT-KHHIPFYEVDLCDRKGLEKVFKEY-----KI   85 (699)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTHHHHHHHHHH-TSCCCEEECCTTCHHHHHHHHHHS-----CC
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCcchHHHHHHHhhcc-CCceEEEEcCCCCHHHHHHHHHhC-----CC
Confidence            579999999999999999999999999999987544322222232211 346888999999999999888753     79


Q ss_pred             eEEEEcCCCCCCCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccccCCCC
Q 025509           81 NILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDP  160 (251)
Q Consensus        81 d~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~  160 (251)
                      |+||||||.....  ...+..++.+++|+.++..+++++..    .     +.++||++||.+............++.+.
T Consensus        86 D~Vih~A~~~~~~--~~~~~~~~~~~~Nv~gt~~ll~a~~~----~-----~~~~iV~~SS~~vyg~~~~~~~~~~~~E~  154 (699)
T 1z45_A           86 DSVIHFAGLKAVG--ESTQIPLRYYHNNILGTVVLLELMQQ----Y-----NVSKFVFSSSATVYGDATRFPNMIPIPEE  154 (699)
T ss_dssp             CEEEECCSCCCHH--HHHHSHHHHHHHHHHHHHHHHHHHHH----H-----TCCEEEEEEEGGGGCCGGGSTTCCSBCTT
T ss_pred             CEEEECCcccCcC--ccccCHHHHHHHHHHHHHHHHHHHHH----c-----CCCEEEEECcHHHhCCCccccccCCcccc
Confidence            9999999964321  12234567899999999988776543    2     24699999997654211100001122233


Q ss_pred             CCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCc
Q 025509          161 SGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNI  208 (251)
Q Consensus       161 ~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~  208 (251)
                      .+..+...|+.+|++++.+++.++.+. ..|  +++..+.|+.+..+.
T Consensus       155 ~~~~p~~~Y~~sK~~~E~~~~~~~~~~-~~g--~~~~ilR~~~vyG~~  199 (699)
T 1z45_A          155 CPLGPTNPYGHTKYAIENILNDLYNSD-KKS--WKFAILRYFNPIGAH  199 (699)
T ss_dssp             SCCCCCSHHHHHHHHHHHHHHHHHHHS-TTS--CEEEEEEECEEECCC
T ss_pred             CCCCCCChHHHHHHHHHHHHHHHHHhc-cCC--CcEEEEEeccccCCC
Confidence            344456789999999999999998875 345  888889998887653

>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}

Probab=99.82  E-value=1.2e-19  Score=147.08  Aligned_cols=165  Identities=13%  Similarity=0.057  Sum_probs=114.1

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      |+||||||+|+||++++++|+++|++|++++|++.++.+..        ...+.++.+|++|.++     +.    +.++
T Consensus         1 MkilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~--------~~~~~~~~~D~~d~~~-----~~----~~~~   63 (224)
T 3h2s_A            1 MKIAVLGATGRAGSAIVAEARRRGHEVLAVVRDPQKAADRL--------GATVATLVKEPLVLTE-----AD----LDSV   63 (224)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHT--------CTTSEEEECCGGGCCH-----HH----HTTC
T ss_pred             CEEEEEcCCCHHHHHHHHHHHHCCCEEEEEEeccccccccc--------CCCceEEecccccccH-----hh----cccC
Confidence            67999999999999999999999999999999876654321        3578999999998877     22    2379


Q ss_pred             eEEEEcCCCCCCCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccccCCCC
Q 025509           81 NILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDP  160 (251)
Q Consensus        81 d~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~  160 (251)
                      |+||||||.....     +    ..++|+.++..++++    +++.     + +++|++||.++......... .....+
T Consensus        64 d~vi~~ag~~~~~-----~----~~~~n~~~~~~l~~a----~~~~-----~-~~~v~~SS~~~~~~~~~~~~-~~~~~~  123 (224)
T 3h2s_A           64 DAVVDALSVPWGS-----G----RGYLHLDFATHLVSL----LRNS-----D-TLAVFILGSASLAMPGADHP-MILDFP  123 (224)
T ss_dssp             SEEEECCCCCTTS-----S----CTHHHHHHHHHHHHT----CTTC-----C-CEEEEECCGGGSBCTTCSSC-GGGGCC
T ss_pred             CEEEECCccCCCc-----c----hhhHHHHHHHHHHHH----HHHc-----C-CcEEEEecceeeccCCCCcc-ccccCC
Confidence            9999999975211     1    135677776555544    3332     3 79999999876654322110 011111


Q ss_pred             CCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCc
Q 025509          161 SGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNI  208 (251)
Q Consensus       161 ~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~  208 (251)
                      ........|+.+|.+.+.+    .......|  ++++.|+||++.++.
T Consensus       124 ~~~~~~~~y~~sK~~~e~~----~~~~~~~~--i~~~ivrp~~v~g~~  165 (224)
T 3h2s_A          124 ESAASQPWYDGALYQYYEY----QFLQMNAN--VNWIGISPSEAFPSG  165 (224)
T ss_dssp             GGGGGSTTHHHHHHHHHHH----HHHTTCTT--SCEEEEEECSBCCCC
T ss_pred             CCCccchhhHHHHHHHHHH----HHHHhcCC--CcEEEEcCccccCCC
Confidence            1111256899999988743    22223556  888889999999883

>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica}

Probab=99.81  E-value=8.2e-19  Score=150.76  Aligned_cols=171  Identities=16%  Similarity=0.130  Sum_probs=122.1

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      |+||||||+|+||++++++|+++|++|++++|+.....+.   +. .  -..+.++.+|+++.+++.++++..     ++
T Consensus        22 ~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~---l~-~--~~~~~~~~~Dl~d~~~~~~~~~~~-----~~   90 (333)
T 2q1w_A           22 KKVFITGICGQIGSHIAELLLERGDKVVGIDNFATGRREH---LK-D--HPNLTFVEGSIADHALVNQLIGDL-----QP   90 (333)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGG---SC-C--CTTEEEEECCTTCHHHHHHHHHHH-----CC
T ss_pred             CEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCCccchhh---Hh-h--cCCceEEEEeCCCHHHHHHHHhcc-----CC
Confidence            5799999999999999999999999999999975431110   10 0  036888999999999999888752     79


Q ss_pred             eEEEEcCCCCCCCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccccCCCC
Q 025509           81 NILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDP  160 (251)
Q Consensus        81 d~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~  160 (251)
                      |+||||||.....   +.++++  +++|+.++..+++++.+.         +.++||++||.+.....+..... ++++.
T Consensus        91 D~vih~A~~~~~~---~~~~~~--~~~N~~~~~~l~~a~~~~---------~~~~iV~~SS~~~~g~~~~~~~~-~~~E~  155 (333)
T 2q1w_A           91 DAVVHTAASYKDP---DDWYND--TLTNCVGGSNVVQAAKKN---------NVGRFVYFQTALCYGVKPIQQPV-RLDHP  155 (333)
T ss_dssp             SEEEECCCCCSCT---TCHHHH--HHHHTHHHHHHHHHHHHT---------TCSEEEEEEEGGGGCSCCCSSSB-CTTSC
T ss_pred             cEEEECceecCCC---ccCChH--HHHHHHHHHHHHHHHHHh---------CCCEEEEECcHHHhCCCcccCCC-CcCCC
Confidence            9999999975432   345555  999999999999988662         24699999997654200000000 12222


Q ss_pred             CCCCcccccchhHHHHHHHHHH-HHHHhccCCCcEEEEEeeCCcccCCc
Q 025509          161 SGYNGFRAYSQSKLANILHANE-LARRLKEDGVDITANSVHPGAIATNI  208 (251)
Q Consensus       161 ~~~~~~~~Y~~sK~a~~~~~~~-la~e~~~~g~~i~v~~v~Pg~v~t~~  208 (251)
                      . .+....|+.+|++.+.+++. ++      .  +.  .+.|+.+..|.
T Consensus       156 ~-~p~~~~Y~~sK~~~E~~~~~s~~------~--~~--ilR~~~v~gp~  193 (333)
T 2q1w_A          156 R-NPANSSYAISKSANEDYLEYSGL------D--FV--TFRLANVVGPR  193 (333)
T ss_dssp             C-CCTTCHHHHHHHHHHHHHHHHTC------C--EE--EEEESEEESTT
T ss_pred             C-CCCCCchHHHHHHHHHHHHhhhC------C--eE--EEeeceEECcC
Confidence            1 22226899999999988877 55      2  43  47888877766

>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*

Probab=99.81  E-value=4.8e-19  Score=141.38  Aligned_cols=151  Identities=18%  Similarity=0.109  Sum_probs=113.0

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      |++|||||+|+||++++++|+++|++|++++|++.+....        ....+.++.+|+++.+++.++++       .+
T Consensus         4 ~~ilVtGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~--------~~~~~~~~~~D~~~~~~~~~~~~-------~~   68 (206)
T 1hdo_A            4 KKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSE--------GPRPAHVVVGDVLQAADVDKTVA-------GQ   68 (206)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGGGSCSS--------SCCCSEEEESCTTSHHHHHHHHT-------TC
T ss_pred             CEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeChhhcccc--------cCCceEEEEecCCCHHHHHHHHc-------CC
Confidence            5799999999999999999999999999999987653211        13468899999999998887765       57


Q ss_pred             eEEEEcCCCCCCCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccccCCCC
Q 025509           81 NILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDP  160 (251)
Q Consensus        81 d~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~  160 (251)
                      |+||||||.... .  .+      .++|+.++..+++++.+.         +.++||++||.+..... .+         
T Consensus        69 d~vi~~a~~~~~-~--~~------~~~n~~~~~~~~~~~~~~---------~~~~~v~~Ss~~~~~~~-~~---------  120 (206)
T 1hdo_A           69 DAVIVLLGTRND-L--SP------TTVMSEGARNIVAAMKAH---------GVDKVVACTSAFLLWDP-TK---------  120 (206)
T ss_dssp             SEEEECCCCTTC-C--SC------CCHHHHHHHHHHHHHHHH---------TCCEEEEECCGGGTSCT-TC---------
T ss_pred             CEEEECccCCCC-C--Cc------cchHHHHHHHHHHHHHHh---------CCCeEEEEeeeeeccCc-cc---------
Confidence            999999996443 1  11      137888877777766432         24699999997654310 00         


Q ss_pred             CCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcc
Q 025509          161 SGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAI  204 (251)
Q Consensus       161 ~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v  204 (251)
                       .......|+.+|.+++.+.+       ..|  ++++.+.||.+
T Consensus       121 -~~~~~~~y~~~K~~~e~~~~-------~~~--i~~~~lrp~~~  154 (206)
T 1hdo_A          121 -VPPRLQAVTDDHIRMHKVLR-------ESG--LKYVAVMPPHI  154 (206)
T ss_dssp             -SCGGGHHHHHHHHHHHHHHH-------HTC--SEEEEECCSEE
T ss_pred             -ccccchhHHHHHHHHHHHHH-------hCC--CCEEEEeCCcc
Confidence             01156789999999988773       246  88999999998

>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}

Probab=99.81  E-value=6.7e-19  Score=149.79  Aligned_cols=168  Identities=17%  Similarity=0.140  Sum_probs=127.0

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      |+||||||+|+||++++++|+++|++|++++|+.....     +     . .+.++.+|++ .+++.++++       ++
T Consensus         3 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~-----~-----~-~~~~~~~Dl~-~~~~~~~~~-------~~   63 (311)
T 3m2p_A            3 LKIAVTGGTGFLGQYVVESIKNDGNTPIILTRSIGNKA-----I-----N-DYEYRVSDYT-LEDLINQLN-------DV   63 (311)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCC----------------CCEEEECCCC-HHHHHHHTT-------TC
T ss_pred             CEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCCCCccc-----C-----C-ceEEEEcccc-HHHHHHhhc-------CC
Confidence            58999999999999999999999999999999843322     1     1 6889999999 888887665       79


Q ss_pred             eEEEEcCCCCCCCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccccCCCC
Q 025509           81 NILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDP  160 (251)
Q Consensus        81 d~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~  160 (251)
                      |+|||+|+.....      +++..+++|+.++..+++++...         +..+||++||.+... ...+.+   +++.
T Consensus        64 d~Vih~a~~~~~~------~~~~~~~~n~~~~~~ll~a~~~~---------~~~r~v~~SS~~vyg-~~~~~~---~~E~  124 (311)
T 3m2p_A           64 DAVVHLAATRGSQ------GKISEFHDNEILTQNLYDACYEN---------NISNIVYASTISAYS-DETSLP---WNEK  124 (311)
T ss_dssp             SEEEECCCCCCSS------SCGGGTHHHHHHHHHHHHHHHHT---------TCCEEEEEEEGGGCC-CGGGCS---BCTT
T ss_pred             CEEEEccccCCCC------ChHHHHHHHHHHHHHHHHHHHHc---------CCCEEEEEccHHHhC-CCCCCC---CCCC
Confidence            9999999965432      45667899999998888887543         245899999965432 222222   2333


Q ss_pred             CCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccC
Q 025509          161 SGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  211 (251)
Q Consensus       161 ~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  211 (251)
                      .+..+...|+.+|.+.+.+++.++.+.   |  ++++.+.|+.+.++....
T Consensus       125 ~~~~p~~~Y~~sK~~~E~~~~~~~~~~---g--~~~~ilRp~~v~G~~~~~  170 (311)
T 3m2p_A          125 ELPLPDLMYGVSKLACEHIGNIYSRKK---G--LCIKNLRFAHLYGFNEKN  170 (311)
T ss_dssp             SCCCCSSHHHHHHHHHHHHHHHHHHHS---C--CEEEEEEECEEECSCC--
T ss_pred             CCCCCCchhHHHHHHHHHHHHHHHHHc---C--CCEEEEeeCceeCcCCCC
Confidence            344456789999999999998888753   5  888889999999887654

>3ajr_A NDP-sugar epimerase; L-threonine dehydrogenase, L-3- hydroxynorvaline, oxidoreductase; HET: NAD; 1.77A {Thermoplasma volcanium} PDB: 3a9w_A* 3a4v_A* 3a1n_A*

Probab=99.81  E-value=3.5e-19  Score=151.71  Aligned_cols=169  Identities=17%  Similarity=0.202  Sum_probs=127.3

Q ss_pred             EEEEECCCChhHHHHHHHHHHc--CCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCC
Q 025509            2 DIVITGATSGIGTETARVLALR--GVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQ   79 (251)
Q Consensus         2 ~vlItG~s~gIG~a~a~~l~~~--G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~   79 (251)
                      +||||||+|+||++++++|+++  |++|++++|+....             ..+.++.+|++|.+++.+++++.     +
T Consensus         1 ~vlVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~-------------~~~~~~~~D~~d~~~~~~~~~~~-----~   62 (317)
T 3ajr_A            1 MILVTGSSGQIGTELVPYLAEKYGKKNVIASDIVQRDT-------------GGIKFITLDVSNRDEIDRAVEKY-----S   62 (317)
T ss_dssp             CEEEESTTSTTHHHHHHHHHHHHCGGGEEEEESSCCCC-------------TTCCEEECCTTCHHHHHHHHHHT-----T
T ss_pred             CEEEEcCCcHHHHHHHHHHHHhcCCCEEEEecCCCccc-------------cCceEEEecCCCHHHHHHHHhhc-----C
Confidence            4899999999999999999998  88999999875431             14678899999999999888752     7


Q ss_pred             eeEEEEcCCCCCCCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccccCCC
Q 025509           80 LNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKIND  159 (251)
Q Consensus        80 id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~  159 (251)
                      +|+|||+|+....   ...++++..+++|+.++..+++++.+.         +.++||++||.+.........+   ..+
T Consensus        63 ~d~vih~a~~~~~---~~~~~~~~~~~~n~~~~~~l~~a~~~~---------~~~~~v~~SS~~~~~~~~~~~~---~~e  127 (317)
T 3ajr_A           63 IDAIFHLAGILSA---KGEKDPALAYKVNMNGTYNILEAAKQH---------RVEKVVIPSTIGVFGPETPKNK---VPS  127 (317)
T ss_dssp             CCEEEECCCCCHH---HHHHCHHHHHHHHHHHHHHHHHHHHHT---------TCCEEEEEEEGGGCCTTSCSSS---BCS
T ss_pred             CcEEEECCcccCC---ccccChHHHhhhhhHHHHHHHHHHHHc---------CCCEEEEecCHHHhCCCCCCCC---ccc
Confidence            9999999996431   123567889999999999999887542         2469999999876542211111   112


Q ss_pred             CCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCc
Q 025509          160 PSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNI  208 (251)
Q Consensus       160 ~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~  208 (251)
                      ..+..+...|+.+|.+.+.+++.++.++   |  ++++.+.|+.+..+.
T Consensus       128 ~~~~~p~~~Y~~sK~~~e~~~~~~~~~~---~--~~~~~lR~~~~~g~~  171 (317)
T 3ajr_A          128 ITITRPRTMFGVTKIAAELLGQYYYEKF---G--LDVRSLRYPGIISYK  171 (317)
T ss_dssp             SSCCCCCSHHHHHHHHHHHHHHHHHHHH---C--CEEEEEEECEEECSS
T ss_pred             cccCCCCchHHHHHHHHHHHHHHHHHhc---C--CeEEEEecCcEeccC
Confidence            2233456789999999999999887665   4  888889877776543

>2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A

Probab=99.81  E-value=1.8e-19  Score=153.49  Aligned_cols=146  Identities=15%  Similarity=0.088  Sum_probs=88.7

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      |+||||||+|+||++++++|+++|++|++++|+...            ++    ++.+|+++.+++.++++..     ++
T Consensus         3 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~------------~~----~~~~Dl~d~~~~~~~~~~~-----~~   61 (315)
T 2ydy_A            3 RRVLVTGATGLLGRAVHKEFQQNNWHAVGCGFRRAR------------PK----FEQVNLLDSNAVHHIIHDF-----QP   61 (315)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHTTTCEEEEEC----------------------------------CHHHHHHH-----CC
T ss_pred             CeEEEECCCcHHHHHHHHHHHhCCCeEEEEccCCCC------------CC----eEEecCCCHHHHHHHHHhh-----CC
Confidence            589999999999999999999999999999986532            11    6788999999999888765     69


Q ss_pred             eEEEEcCCCCCCCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccccCCCC
Q 025509           81 NILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDP  160 (251)
Q Consensus        81 d~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~  160 (251)
                      |+||||||....  ..+.++++..+++|+.++..+++++.+.          +++||++||......  ...+   +++.
T Consensus        62 d~vih~A~~~~~--~~~~~~~~~~~~~n~~~~~~l~~a~~~~----------~~~~v~~SS~~v~~~--~~~~---~~E~  124 (315)
T 2ydy_A           62 HVIVHCAAERRP--DVVENQPDAASQLNVDASGNLAKEAAAV----------GAFLIYISSDYVFDG--TNPP---YREE  124 (315)
T ss_dssp             SEEEECC---------------------CHHHHHHHHHHHHH----------TCEEEEEEEGGGSCS--SSCS---BCTT
T ss_pred             CEEEECCcccCh--hhhhcCHHHHHHHHHHHHHHHHHHHHHc----------CCeEEEEchHHHcCC--CCCC---CCCC
Confidence            999999996432  2345678899999999999999998753          249999999876542  1222   2233


Q ss_pred             CCCCcccccchhHHHHHHHHHHHH
Q 025509          161 SGYNGFRAYSQSKLANILHANELA  184 (251)
Q Consensus       161 ~~~~~~~~Y~~sK~a~~~~~~~la  184 (251)
                      .+..+...|+.+|.+++.+++.++
T Consensus       125 ~~~~~~~~Y~~sK~~~e~~~~~~~  148 (315)
T 2ydy_A          125 DIPAPLNLYGKTKLDGEKAVLENN  148 (315)
T ss_dssp             SCCCCCSHHHHHHHHHHHHHHHHC
T ss_pred             CCCCCcCHHHHHHHHHHHHHHHhC
Confidence            334456789999999999988874

>2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A*

Probab=99.80  E-value=5.5e-20  Score=160.79  Aligned_cols=179  Identities=12%  Similarity=0.058  Sum_probs=127.8

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcC-CEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCC
Q 025509            1 MDIVITGATSGIGTETARVLALRG-VHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQ   79 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G-~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~   79 (251)
                      |+||||||+|+||++++++|+++| ++|++++|+.....+.   +.   ....+.++.+|+++.+++.++++       +
T Consensus        33 ~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~---l~---~~~~v~~~~~Dl~d~~~l~~~~~-------~   99 (377)
T 2q1s_A           33 TNVMVVGGAGFVGSNLVKRLLELGVNQVHVVDNLLSAEKIN---VP---DHPAVRFSETSITDDALLASLQD-------E   99 (377)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCSEEEEECCCTTCCGGG---SC---CCTTEEEECSCTTCHHHHHHCCS-------C
T ss_pred             CEEEEECCccHHHHHHHHHHHHcCCceEEEEECCCCCchhh---cc---CCCceEEEECCCCCHHHHHHHhh-------C
Confidence            579999999999999999999999 9999999975432110   10   13568899999999888776543       7


Q ss_pred             eeEEEEcCCCCCCCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccccCCC
Q 025509           80 LNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKIND  159 (251)
Q Consensus        80 id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~  159 (251)
                      +|+|||+||....  ..+.++++..+++|+.++..+++++...        .+.++||++||.+.... ..+.+++. .+
T Consensus       100 ~d~Vih~A~~~~~--~~~~~~~~~~~~~nv~~~~~ll~a~~~~--------~~~~~~V~~SS~~vyg~-~~~~~~~~-~E  167 (377)
T 2q1s_A          100 YDYVFHLATYHGN--QSSIHDPLADHENNTLTTLKLYERLKHF--------KRLKKVVYSAAGCSIAE-KTFDDAKA-TE  167 (377)
T ss_dssp             CSEEEECCCCSCH--HHHHHCHHHHHHHHTHHHHHHHHHHTTC--------SSCCEEEEEEEC----------------C
T ss_pred             CCEEEECCCccCc--hhhhhCHHHHHHHHHHHHHHHHHHHHHh--------CCCCeEEEeCCHHHcCC-CCCCCcCc-cc
Confidence            9999999996432  1234567889999999999988876321        02359999999754321 11111110 01


Q ss_pred             CC---CC-CcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcc
Q 025509          160 PS---GY-NGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNII  209 (251)
Q Consensus       160 ~~---~~-~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~  209 (251)
                      ..   +. .+...|+.+|.+.+.+++.++.++   |  ++++.+.||.+.++..
T Consensus       168 ~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---g--i~~~ilRp~~v~G~~~  216 (377)
T 2q1s_A          168 ETDIVSLHNNDSPYSMSKIFGEFYSVYYHKQH---Q--LPTVRARFQNVYGPGE  216 (377)
T ss_dssp             CCCCCCSSCCCSHHHHHHHHHHHHHHHHHHHH---C--CCEEEEEECCEECTTC
T ss_pred             ccccccccCCCCchHHHHHHHHHHHHHHHHHh---C--CCEEEEeeccEECCCC
Confidence            11   22 445689999999999999998776   4  8888899999999875

>2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A*

Probab=99.80  E-value=1.6e-19  Score=156.43  Aligned_cols=176  Identities=9%  Similarity=0.010  Sum_probs=130.1

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcC-CEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCC
Q 025509            1 MDIVITGATSGIGTETARVLALRG-VHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQ   79 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G-~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~   79 (251)
                      |+||||||+|+||++++++|+++| ++|++++|+.....     . +..+  .+. +.+|+++.+.++++++.  ..+++
T Consensus        47 ~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~-----~-~~~~--~~~-~~~d~~~~~~~~~~~~~--~~~~~  115 (357)
T 2x6t_A           47 RMIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTK-----F-VNLV--DLN-IADYMDKEDFLIQIMAG--EEFGD  115 (357)
T ss_dssp             -CEEEETTTSHHHHHHHHHHHHTTCCCEEEEECCSSGGG-----G-GGTT--TSC-CSEEEEHHHHHHHHHTT--CCCSS
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCcEEEEEecCCCcch-----h-hccc--Cce-EeeecCcHHHHHHHHhh--cccCC
Confidence            469999999999999999999999 89999999764421     0 1111  222 67899998888877653  23568


Q ss_pred             eeEEEEcCCCCCCCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccccCCC
Q 025509           80 LNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKIND  159 (251)
Q Consensus        80 id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~  159 (251)
                      +|+|||+||....    +.++++..+++|+.++..+++++.+.         +. +||++||.+.... ..+.++   ++
T Consensus       116 ~d~Vih~A~~~~~----~~~~~~~~~~~n~~~~~~ll~a~~~~---------~~-r~V~~SS~~v~g~-~~~~~~---~E  177 (357)
T 2x6t_A          116 VEAIFHEGACSST----TEWDGKYMMDNNYQYSKELLHYCLER---------EI-PFLYASSAATYGG-RTSDFI---ES  177 (357)
T ss_dssp             CCEEEECCSCCCT----TCCCHHHHHHHTHHHHHHHHHHHHHH---------TC-CEEEEEEGGGGCS-CSSCCC---SS
T ss_pred             CCEEEECCcccCC----ccCCHHHHHHHHHHHHHHHHHHHHHc---------CC-eEEEEcchHHhCC-CCCCCc---CC
Confidence            9999999996543    34568899999999999999988763         24 8999999865432 111122   22


Q ss_pred             CCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCccc
Q 025509          160 PSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIR  210 (251)
Q Consensus       160 ~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~  210 (251)
                      ..+..+...|+.+|.+.+.+++.++.++   |  ++++.|.||.+.+|...
T Consensus       178 ~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---g--~~~~ilRp~~v~Gp~~~  223 (357)
T 2x6t_A          178 REYEKPLNVFGYSKFLFDEYVRQILPEA---N--SQIVGFRYFNVYGPREG  223 (357)
T ss_dssp             GGGCCCSSHHHHHHHHHHHHHHHHGGGC---S--SCEEEEEECEEESSSCT
T ss_pred             cCCCCCCChhHHHHHHHHHHHHHHHHHc---C--CCEEEEecCeEECCCCC
Confidence            2233345689999999999998887654   5  78888999999988644

>4dqv_A Probable peptide synthetase NRP (peptide synthase; GXXGXXG motif, rossmann fold, short chain dehydrogenase/REDU family, reductase; 2.30A {Mycobacterium tuberculosis}

Probab=99.80  E-value=7.8e-19  Score=158.30  Aligned_cols=179  Identities=19%  Similarity=0.176  Sum_probs=128.2

Q ss_pred             CEEEEECCCChhHHHHHHHHHHc---CCEEEEEecCchhHHHHHHHHHhhCC--------------CCceEEEEecCC--
Q 025509            1 MDIVITGATSGIGTETARVLALR---GVHVVMGVRDIAAGKDVKETIVKEIP--------------SAKVDAMELDLS--   61 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~---G~~Vi~~~r~~~~~~~~~~~~~~~~~--------------~~~v~~~~~D~~--   61 (251)
                      |+||||||+|+||++++++|++.   |++|++++|+.... ...+.+.+...              ..++.++.+|++  
T Consensus        74 ~~VLVTGatG~IG~~l~~~Ll~~~~~g~~V~~l~R~~~~~-~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~~~  152 (478)
T 4dqv_A           74 RTVLLTGATGFLGRYLVLELLRRLDVDGRLICLVRAESDE-DARRRLEKTFDSGDPELLRHFKELAADRLEVVAGDKSEP  152 (478)
T ss_dssp             CEEEEECTTSHHHHHHHHHHHHHSCTTCEEEEEECSSSHH-HHHHHHHGGGCSSCHHHHHHHHHHHTTTEEEEECCTTSG
T ss_pred             CEEEEECCCcHHHHHHHHHHHhcCCCCCEEEEEECCCCcH-HHHHHHHHHHHhcchhhhhhhhhhccCceEEEEeECCCc
Confidence            68999999999999999999999   89999999987653 23333333322              257999999998  


Q ss_pred             ----CHHHHHHHHHHHHhcCCCeeEEEEcCCCCCCCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEE
Q 025509           62 ----SLASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRII  137 (251)
Q Consensus        62 ----~~~~i~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv  137 (251)
                          +.+++.++++       ++|+||||||....      +.++..+++|+.++..+++++...         +..+||
T Consensus       153 ~~gld~~~~~~~~~-------~~D~Vih~Aa~~~~------~~~~~~~~~Nv~gt~~ll~aa~~~---------~~~~~V  210 (478)
T 4dqv_A          153 DLGLDQPMWRRLAE-------TVDLIVDSAAMVNA------FPYHELFGPNVAGTAELIRIALTT---------KLKPFT  210 (478)
T ss_dssp             GGGCCHHHHHHHHH-------HCCEEEECCSSCSB------SSCCEEHHHHHHHHHHHHHHHTSS---------SCCCEE
T ss_pred             ccCCCHHHHHHHHc-------CCCEEEECccccCC------cCHHHHHHHHHHHHHHHHHHHHhC---------CCCeEE
Confidence                5566776665       58999999997542      345667899999999988876432         245899


Q ss_pred             EEcCccccccccCCcccccCCCCC--------CCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCc
Q 025509          138 NVSSEGHRLAYHEGIRFDKINDPS--------GYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNI  208 (251)
Q Consensus       138 ~vsS~~~~~~~~~~~~~~~~~~~~--------~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~  208 (251)
                      ++||.+... .....++.+.....        .......|+.+|.+.+.+++.++.+.   |  ++++.|.||.|.++.
T Consensus       211 ~iSS~~v~~-~~~~~~~~E~~~~~p~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---g--i~~~ivRpg~v~G~~  283 (478)
T 4dqv_A          211 YVSTADVGA-AIEPSAFTEDADIRVISPTRTVDGGWAGGYGTSKWAGEVLLREANDLC---A--LPVAVFRCGMILADT  283 (478)
T ss_dssp             EEEEGGGGT-TSCTTTCCSSSCHHHHCCEEECCTTSEECHHHHHHHHHHHHHHHHHHH---C--CCEEEEEECEEECCS
T ss_pred             EEeehhhcC-ccCCCCcCCcccccccCcccccccccccchHHHHHHHHHHHHHHHHHh---C--CCeEEEECceeeCCC
Confidence            999975432 11111221111000        00112459999999999999888765   4  788889999998764

>2a35_A Hypothetical protein PA4017; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.2.1.2

Probab=99.79  E-value=4.9e-20  Score=148.36  Aligned_cols=150  Identities=16%  Similarity=0.094  Sum_probs=118.2

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCC--EEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCC
Q 025509            1 MDIVITGATSGIGTETARVLALRGV--HVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHH   78 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~--~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g   78 (251)
                      |++|||||+|+||++++++|+++|+  +|++++|++.+          .  ...+.++.+|+++.+++.+++        
T Consensus         6 ~~vlVtGatG~iG~~l~~~l~~~g~~~~V~~~~r~~~~----------~--~~~~~~~~~D~~~~~~~~~~~--------   65 (215)
T 2a35_A            6 KRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKALA----------E--HPRLDNPVGPLAELLPQLDGS--------   65 (215)
T ss_dssp             CEEEEECTTSHHHHHHHHHHHHCTTCCEEECCBSSCCC----------C--CTTEECCBSCHHHHGGGCCSC--------
T ss_pred             ceEEEECCCcHHHHHHHHHHHhCCCCCeEEEEeCCCcc----------c--CCCceEEeccccCHHHHHHhh--------
Confidence            4799999999999999999999998  99999998754          0  346788889998776655432        


Q ss_pred             CeeEEEEcCCCCCCCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccccCC
Q 025509           79 QLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKIN  158 (251)
Q Consensus        79 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~  158 (251)
                       +|+||||||....    +.+++++.+++|+.++..+++++.+.         +.++||++||.....            
T Consensus        66 -~d~vi~~a~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~---------~~~~~v~~Ss~~~~~------------  119 (215)
T 2a35_A           66 -IDTAFCCLGTTIK----EAGSEEAFRAVDFDLPLAVGKRALEM---------GARHYLVVSALGADA------------  119 (215)
T ss_dssp             -CSEEEECCCCCHH----HHSSHHHHHHHHTHHHHHHHHHHHHT---------TCCEEEEECCTTCCT------------
T ss_pred             -hcEEEECeeeccc----cCCCHHHHHHhhHHHHHHHHHHHHHc---------CCCEEEEECCcccCC------------
Confidence             8999999996321    24568889999999999988886542         246899999976542            


Q ss_pred             CCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEE-EEEeeCCcccCCccc
Q 025509          159 DPSGYNGFRAYSQSKLANILHANELARRLKEDGVDIT-ANSVHPGAIATNIIR  210 (251)
Q Consensus       159 ~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~-v~~v~Pg~v~t~~~~  210 (251)
                           ++...|+.+|.+++.+++.       .|  ++ ++.|+||++.++...
T Consensus       120 -----~~~~~y~~sK~~~e~~~~~-------~~--~~~~~~vrp~~v~g~~~~  158 (215)
T 2a35_A          120 -----KSSIFYNRVKGELEQALQE-------QG--WPQLTIARPSLLFGPREE  158 (215)
T ss_dssp             -----TCSSHHHHHHHHHHHHHTT-------SC--CSEEEEEECCSEESTTSC
T ss_pred             -----CCccHHHHHHHHHHHHHHH-------cC--CCeEEEEeCceeeCCCCc
Confidence                 1345899999999887764       25  77 899999999988644

>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}

Probab=99.79  E-value=5.5e-19  Score=144.79  Aligned_cols=155  Identities=16%  Similarity=0.170  Sum_probs=103.9

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcC-CEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCC
Q 025509            1 MDIVITGATSGIGTETARVLALRG-VHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQ   79 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G-~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~   79 (251)
                      |+||||||+|+||++++++|+++| ++|++++|+++++.+.        ....+.++++|++|.+++.++++       +
T Consensus        24 k~vlVtGatG~iG~~l~~~L~~~G~~~V~~~~R~~~~~~~~--------~~~~~~~~~~Dl~d~~~~~~~~~-------~   88 (236)
T 3qvo_A           24 KNVLILGAGGQIARHVINQLADKQTIKQTLFARQPAKIHKP--------YPTNSQIIMGDVLNHAALKQAMQ-------G   88 (236)
T ss_dssp             EEEEEETTTSHHHHHHHHHHTTCTTEEEEEEESSGGGSCSS--------CCTTEEEEECCTTCHHHHHHHHT-------T
T ss_pred             cEEEEEeCCcHHHHHHHHHHHhCCCceEEEEEcChhhhccc--------ccCCcEEEEecCCCHHHHHHHhc-------C
Confidence            479999999999999999999999 8999999987654321        13478999999999999988776       5


Q ss_pred             eeEEEEcCCCCCCCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccccCCC
Q 025509           80 LNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKIND  159 (251)
Q Consensus        80 id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~  159 (251)
                      +|+||||+|..         ++.           ..++.+++.+++.     +.++||++||..+.......  +.+...
T Consensus        89 ~D~vv~~a~~~---------~~~-----------~~~~~~~~~~~~~-----~~~~iV~iSS~~~~~~~~~~--~~~~~~  141 (236)
T 3qvo_A           89 QDIVYANLTGE---------DLD-----------IQANSVIAAMKAC-----DVKRLIFVLSLGIYDEVPGK--FVEWNN  141 (236)
T ss_dssp             CSEEEEECCST---------THH-----------HHHHHHHHHHHHT-----TCCEEEEECCCCC---------------
T ss_pred             CCEEEEcCCCC---------chh-----------HHHHHHHHHHHHc-----CCCEEEEEecceecCCCCcc--cccchh
Confidence            79999999841         111           2355777888775     45799999998765421110  000000


Q ss_pred             CCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCccc
Q 025509          160 PSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIR  210 (251)
Q Consensus       160 ~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~  210 (251)
                      .........|..+|           ..+.+.|  |+++.|+||++.++...
T Consensus       142 ~~~~~~~~~~~~~~-----------~~l~~~g--i~~~~vrPg~i~~~~~~  179 (236)
T 3qvo_A          142 AVIGEPLKPFRRAA-----------DAIEASG--LEYTILRPAWLTDEDII  179 (236)
T ss_dssp             ---CGGGHHHHHHH-----------HHHHTSC--SEEEEEEECEEECCSCC
T ss_pred             hcccchHHHHHHHH-----------HHHHHCC--CCEEEEeCCcccCCCCc
Confidence            00111122333322           2234567  99999999999887644

>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}

Probab=99.79  E-value=1.9e-18  Score=139.50  Aligned_cols=161  Identities=17%  Similarity=0.222  Sum_probs=106.7

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      |+||||||+|+||++++++|+++|++|++++|+++++...         ...+.++.+|++|.++     +.+    .++
T Consensus         1 MkvlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~---------~~~~~~~~~D~~d~~~-----~~~----~~~   62 (221)
T 3ew7_A            1 MKIGIIGATGRAGSRILEEAKNRGHEVTAIVRNAGKITQT---------HKDINILQKDIFDLTL-----SDL----SDQ   62 (221)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCSHHHHHH---------CSSSEEEECCGGGCCH-----HHH----TTC
T ss_pred             CeEEEEcCCchhHHHHHHHHHhCCCEEEEEEcCchhhhhc---------cCCCeEEeccccChhh-----hhh----cCC
Confidence            6899999999999999999999999999999998765432         1468899999998877     222    378


Q ss_pred             eEEEEcCCCCCCCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccccCCCC
Q 025509           81 NILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDP  160 (251)
Q Consensus        81 d~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~  160 (251)
                      |+||||||.....           .++|+.++    +.+++.+++.     +.+++|++||.++...........   ..
T Consensus        63 d~vi~~ag~~~~~-----------~~~~~~~~----~~l~~a~~~~-----~~~~~v~~SS~~~~~~~~~~~~~~---~~  119 (221)
T 3ew7_A           63 NVVVDAYGISPDE-----------AEKHVTSL----DHLISVLNGT-----VSPRLLVVGGAASLQIDEDGNTLL---ES  119 (221)
T ss_dssp             SEEEECCCSSTTT-----------TTSHHHHH----HHHHHHHCSC-----CSSEEEEECCCC-----------------
T ss_pred             CEEEECCcCCccc-----------cchHHHHH----HHHHHHHHhc-----CCceEEEEecceEEEcCCCCcccc---cc
Confidence            9999999973211           22355554    4445555443     367999999987765433221111   11


Q ss_pred             CCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCC
Q 025509          161 SGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATN  207 (251)
Q Consensus       161 ~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~  207 (251)
                      .+......|+.+|.+.+.+. .+..  ...|  ++++.|+||.+.++
T Consensus       120 ~~~~~~~~y~~~k~~~e~~~-~~~~--~~~g--i~~~ivrp~~v~g~  161 (221)
T 3ew7_A          120 KGLREAPYYPTARAQAKQLE-HLKS--HQAE--FSWTYISPSAMFEP  161 (221)
T ss_dssp             -----CCCSCCHHHHHHHHH-HHHT--TTTT--SCEEEEECSSCCCC
T ss_pred             CCCCCHHHHHHHHHHHHHHH-HHHh--hccC--ccEEEEeCcceecC
Confidence            12223457999999988752 2221  1456  88888999999987

>1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2

Probab=99.78  E-value=1.2e-18  Score=146.77  Aligned_cols=154  Identities=22%  Similarity=0.273  Sum_probs=118.1

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      |+||||||+|+||++++++|+++|++|++++|+                       .+|+++.+++.++++..     ++
T Consensus        13 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~-----------------------~~Dl~d~~~~~~~~~~~-----~~   64 (292)
T 1vl0_A           13 MKILITGANGQLGREIQKQLKGKNVEVIPTDVQ-----------------------DLDITNVLAVNKFFNEK-----KP   64 (292)
T ss_dssp             EEEEEESTTSHHHHHHHHHHTTSSEEEEEECTT-----------------------TCCTTCHHHHHHHHHHH-----CC
T ss_pred             ceEEEECCCChHHHHHHHHHHhCCCeEEeccCc-----------------------cCCCCCHHHHHHHHHhc-----CC
Confidence            479999999999999999999999999999985                       26999999999888765     69


Q ss_pred             eEEEEcCCCCCCCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccccCCCC
Q 025509           81 NILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDP  160 (251)
Q Consensus        81 d~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~  160 (251)
                      |+||||||....  +.+.++++..+++|+.++..+++++.+.         + .+||++||.+..... ...++   ++.
T Consensus        65 d~vih~A~~~~~--~~~~~~~~~~~~~nv~~~~~l~~a~~~~---------~-~~iv~~SS~~v~~~~-~~~~~---~E~  128 (292)
T 1vl0_A           65 NVVINCAAHTAV--DKCEEQYDLAYKINAIGPKNLAAAAYSV---------G-AEIVQISTDYVFDGE-AKEPI---TEF  128 (292)
T ss_dssp             SEEEECCCCCCH--HHHHHCHHHHHHHHTHHHHHHHHHHHHH---------T-CEEEEEEEGGGSCSC-CSSCB---CTT
T ss_pred             CEEEECCccCCH--HHHhcCHHHHHHHHHHHHHHHHHHHHHc---------C-CeEEEechHHeECCC-CCCCC---CCC
Confidence            999999996432  2234678899999999999999987653         2 399999997654321 11122   222


Q ss_pred             CCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCC
Q 025509          161 SGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATN  207 (251)
Q Consensus       161 ~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~  207 (251)
                      .+..+...|+.+|.+.+.+++.++.         .+..+.|+.+.++
T Consensus       129 ~~~~~~~~Y~~sK~~~E~~~~~~~~---------~~~~lR~~~v~G~  166 (292)
T 1vl0_A          129 DEVNPQSAYGKTKLEGENFVKALNP---------KYYIVRTAWLYGD  166 (292)
T ss_dssp             SCCCCCSHHHHHHHHHHHHHHHHCS---------SEEEEEECSEESS
T ss_pred             CCCCCccHHHHHHHHHHHHHHhhCC---------CeEEEeeeeeeCC
Confidence            3334456899999999988877643         1344888888866

>2ggs_A 273AA long hypothetical DTDP-4-dehydrorhamnose reductase; alpha, beta, oxidoreductase; HET: NDP; 1.70A {Sulfolobus tokodaii}

Probab=99.78  E-value=1e-18  Score=145.68  Aligned_cols=143  Identities=19%  Similarity=0.194  Sum_probs=110.9

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      |++|||||+|+||++++++|+ +|++|++++|++.. .          ++     +.+|+++.+++.++++..     ++
T Consensus         1 m~ilVtGatG~iG~~l~~~L~-~g~~V~~~~r~~~~-~----------~~-----~~~Dl~~~~~~~~~~~~~-----~~   58 (273)
T 2ggs_A            1 MRTLITGASGQLGIELSRLLS-ERHEVIKVYNSSEI-Q----------GG-----YKLDLTDFPRLEDFIIKK-----RP   58 (273)
T ss_dssp             CCEEEETTTSHHHHHHHHHHT-TTSCEEEEESSSCC-T----------TC-----EECCTTSHHHHHHHHHHH-----CC
T ss_pred             CEEEEECCCChhHHHHHHHHh-cCCeEEEecCCCcC-C----------CC-----ceeccCCHHHHHHHHHhc-----CC
Confidence            679999999999999999999 48999999998642 0          12     789999999999988865     69


Q ss_pred             eEEEEcCCCCCCCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccccCCCC
Q 025509           81 NILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDP  160 (251)
Q Consensus        81 d~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~  160 (251)
                      |+||||||....  +.+.++++..+++|+.++..+++++.+.          +++||++||..+......  +   +.+.
T Consensus        59 d~vi~~a~~~~~--~~~~~~~~~~~~~n~~~~~~l~~~~~~~----------~~~iv~~SS~~~~~~~~~--~---~~e~  121 (273)
T 2ggs_A           59 DVIINAAAMTDV--DKCEIEKEKAYKINAEAVRHIVRAGKVI----------DSYIVHISTDYVFDGEKG--N---YKEE  121 (273)
T ss_dssp             SEEEECCCCCCH--HHHHHCHHHHHHHHTHHHHHHHHHHHHT----------TCEEEEEEEGGGSCSSSC--S---BCTT
T ss_pred             CEEEECCcccCh--hhhhhCHHHHHHHhHHHHHHHHHHHHHh----------CCeEEEEecceeEcCCCC--C---cCCC
Confidence            999999996432  2235678899999999999999988531          359999999876542211  2   2222


Q ss_pred             CCCCcccccchhHHHHHHHHHH
Q 025509          161 SGYNGFRAYSQSKLANILHANE  182 (251)
Q Consensus       161 ~~~~~~~~Y~~sK~a~~~~~~~  182 (251)
                      .+..+...|+.+|++++.+++.
T Consensus       122 ~~~~~~~~Y~~sK~~~e~~~~~  143 (273)
T 2ggs_A          122 DIPNPINYYGLSKLLGETFALQ  143 (273)
T ss_dssp             SCCCCSSHHHHHHHHHHHHHCC
T ss_pred             CCCCCCCHHHHHHHHHHHHHhC
Confidence            2333456899999999998877

>1e6u_A GDP-fucose synthetase; epimerase/reductase, SDR, RED; HET: NAP; 1.45A {Escherichia coli} SCOP: c.2.1.2 PDB: 1e7q_A* 1bsv_A* 1fxs_A* 1gfs_A 1e7s_A* 1bws_A* 1e7r_A*

Probab=99.78  E-value=3.1e-18  Score=146.07  Aligned_cols=167  Identities=15%  Similarity=0.099  Sum_probs=125.5

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      |+||||||+|+||++++++|+++|++|++++|+.                      .+|+++.+++.+++++.     ++
T Consensus         4 ~~ilVtGatG~iG~~l~~~L~~~g~~v~~~~r~~----------------------~~D~~d~~~~~~~~~~~-----~~   56 (321)
T 1e6u_A            4 QRVFIAGHRGMVGSAIRRQLEQRGDVELVLRTRD----------------------ELNLLDSRAVHDFFASE-----RI   56 (321)
T ss_dssp             EEEEEETTTSHHHHHHHHHHTTCTTEEEECCCTT----------------------TCCTTCHHHHHHHHHHH-----CC
T ss_pred             CEEEEECCCcHHHHHHHHHHHhCCCeEEEEecCc----------------------cCCccCHHHHHHHHHhc-----CC
Confidence            4799999999999999999999999999888752                      26999999999888765     69


Q ss_pred             eEEEEcCCCCCCCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccccCCCC
Q 025509           81 NILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDP  160 (251)
Q Consensus        81 d~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~  160 (251)
                      |+|||+|+.... .....++++..+++|+.++..+++++.+.         +..++|++||.+.... ....++++....
T Consensus        57 d~vih~a~~~~~-~~~~~~~~~~~~~~n~~~~~~l~~~~~~~---------~~~~~v~~SS~~vyg~-~~~~~~~E~~~~  125 (321)
T 1e6u_A           57 DQVYLAAAKVGG-IVANNTYPADFIYQNMMIESNIIHAAHQN---------DVNKLLFLGSSCIYPK-LAKQPMAESELL  125 (321)
T ss_dssp             SEEEECCCCCCC-HHHHHHCHHHHHHHHHHHHHHHHHHHHHT---------TCCEEEEECCGGGSCT-TCCSSBCGGGTT
T ss_pred             CEEEEcCeecCC-cchhhhCHHHHHHHHHHHHHHHHHHHHHh---------CCCeEEEEccHHHcCC-CCCCCcCccccc
Confidence            999999996432 11234567888999999999988887542         2459999999765432 112222221110


Q ss_pred             --CCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCccc
Q 025509          161 --SGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIR  210 (251)
Q Consensus       161 --~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~  210 (251)
                        ...+....|+.+|.+.+.+++.++.++   |  ++++.+.||.+.++...
T Consensus       126 ~~~~~p~~~~Y~~sK~~~E~~~~~~~~~~---~--~~~~ilrp~~v~G~~~~  172 (321)
T 1e6u_A          126 QGTLEPTNEPYAIAKIAGIKLCESYNRQY---G--RDYRSVMPTNLYGPHDN  172 (321)
T ss_dssp             SSCCCGGGHHHHHHHHHHHHHHHHHHHHH---C--CEEEEEEECEEESTTCC
T ss_pred             cCCCCCCCCccHHHHHHHHHHHHHHHHHh---C--CCEEEEEeCCcCCcCCC
Confidence              122224589999999999999988766   4  88899999999988654

>1eq2_A ADP-L-glycero-D-mannoheptose 6-epimerase; N-terminal domain rossmann fold, C-terminal mixed alpha/beta domain; HET: NAP ADQ; 2.00A {Escherichia coli} SCOP: c.2.1.2

Probab=99.77  E-value=1.2e-18  Score=147.73  Aligned_cols=175  Identities=10%  Similarity=0.019  Sum_probs=126.7

Q ss_pred             EEEEECCCChhHHHHHHHHHHcC-CEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            2 DIVITGATSGIGTETARVLALRG-VHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         2 ~vlItG~s~gIG~a~a~~l~~~G-~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      +||||||+|+||++++++|+++| ++|++++|+.....  ...+.    +  +. +.+|+++.+.+.++++..  .++++
T Consensus         1 ~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~--~~~~~----~--~~-~~~d~~~~~~~~~~~~~~--~~~~~   69 (310)
T 1eq2_A            1 MIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTK--FVNLV----D--LN-IADYMDKEDFLIQIMAGE--EFGDV   69 (310)
T ss_dssp             CEEEETTTSHHHHHHHHHHHTTTCCCEEEEECCSSGGG--GHHHH----T--SC-CSEEEEHHHHHHHHHTTC--CCSSC
T ss_pred             CEEEEcCccHHHHHHHHHHHHCCCcEEEEEccCCCCch--hhhcC----c--ce-eccccccHHHHHHHHhcc--ccCCC
Confidence            48999999999999999999999 89999998765421  01111    1  22 678999888877765521  12379


Q ss_pred             eEEEEcCCCCCCCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccccCCCC
Q 025509           81 NILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDP  160 (251)
Q Consensus        81 d~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~  160 (251)
                      |+|||+||....    +.++++..+++|+.++..+++++.+.         +. ++|++||.+.... ....++   ++.
T Consensus        70 d~vi~~a~~~~~----~~~~~~~~~~~n~~~~~~l~~a~~~~---------~~-~~v~~SS~~v~g~-~~~~~~---~E~  131 (310)
T 1eq2_A           70 EAIFHEGACSST----TEWDGKYMMDNNYQYSKELLHYCLER---------EI-PFLYASSAATYGG-RTSDFI---ESR  131 (310)
T ss_dssp             CEEEECCSCCCT----TCCCHHHHHHHTHHHHHHHHHHHHHH---------TC-CEEEEEEGGGGTT-CCSCBC---SSG
T ss_pred             cEEEECcccccC----cccCHHHHHHHHHHHHHHHHHHHHHc---------CC-eEEEEeeHHHhCC-CCCCCC---CCC
Confidence            999999996443    34567889999999999999887653         24 8999999765322 111122   222


Q ss_pred             CCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCccc
Q 025509          161 SGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIR  210 (251)
Q Consensus       161 ~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~  210 (251)
                      .+..+...|+.+|.+.+.+++.++.+.   |  ++++.+.||.+.++...
T Consensus       132 ~~~~p~~~Y~~sK~~~e~~~~~~~~~~---g--~~~~~lrp~~v~G~~~~  176 (310)
T 1eq2_A          132 EYEKPLNVYGYSKFLFDEYVRQILPEA---N--SQIVGFRYFNVYGPREG  176 (310)
T ss_dssp             GGCCCSSHHHHHHHHHHHHHHHHGGGC---S--SCEEEEEECEEESSSCG
T ss_pred             CCCCCCChhHHHHHHHHHHHHHHHHHc---C--CCEEEEeCCcEECcCCC
Confidence            233345689999999999998887653   5  78888999999988654

>2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A*

Probab=99.77  E-value=2.1e-18  Score=148.72  Aligned_cols=177  Identities=14%  Similarity=0.064  Sum_probs=125.8

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      |+||||||+|+||++++++|+++|++|++++|+.....+.   +........+.++.+|+.+..            ..++
T Consensus        28 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~---~~~~~~~~~~~~~~~D~~~~~------------~~~~   92 (343)
T 2b69_A           28 KRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRN---VEHWIGHENFELINHDVVEPL------------YIEV   92 (343)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGG---TGGGTTCTTEEEEECCTTSCC------------CCCC
T ss_pred             CEEEEEcCccHHHHHHHHHHHHCCCEEEEEeCCCccchhh---hhhhccCCceEEEeCccCChh------------hcCC
Confidence            5799999999999999999999999999999864321111   111111346889999998742            3479


Q ss_pred             eEEEEcCCCCCCCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccccCC--
Q 025509           81 NILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKIN--  158 (251)
Q Consensus        81 d~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~--  158 (251)
                      |+|||+||.....  ...++++..+++|+.++..+++++.+.          +.++|++||.+... .....++++..  
T Consensus        93 d~vih~A~~~~~~--~~~~~~~~~~~~n~~~~~~l~~a~~~~----------~~~~v~~SS~~v~g-~~~~~~~~E~~~~  159 (343)
T 2b69_A           93 DQIYHLASPASPP--NYMYNPIKTLKTNTIGTLNMLGLAKRV----------GARLLLASTSEVYG-DPEVHPQSEDYWG  159 (343)
T ss_dssp             SEEEECCSCCSHH--HHTTCHHHHHHHHHHHHHHHHHHHHHH----------TCEEEEEEEGGGGB-SCSSSSBCTTCCC
T ss_pred             CEEEECccccCch--hhhhCHHHHHHHHHHHHHHHHHHHHHh----------CCcEEEECcHHHhC-CCCCCCCcccccc
Confidence            9999999964321  112456788999999999999887543          24899999965432 22212222111  


Q ss_pred             CCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCccc
Q 025509          159 DPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIR  210 (251)
Q Consensus       159 ~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~  210 (251)
                      ...+......|+.+|.+.+.+++.++.+.   |  ++++.+.||.+.+|...
T Consensus       160 ~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~--~~~~ilrp~~v~G~~~~  206 (343)
T 2b69_A          160 HVNPIGPRACYDEGKRVAETMCYAYMKQE---G--VEVRVARIFNTFGPRMH  206 (343)
T ss_dssp             BCCSSSTTHHHHHHHHHHHHHHHHHHHHH---C--CCEEEEEECCEECTTCC
T ss_pred             cCCCCCCCCchHHHHHHHHHHHHHHHHHh---C--CcEEEEEEcceeCcCCC
Confidence            01244456689999999999999988765   4  78888999999988654

>3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} SCOP: c.2.1.0

Probab=99.77  E-value=1.8e-18  Score=145.31  Aligned_cols=155  Identities=15%  Similarity=0.155  Sum_probs=120.1

Q ss_pred             EEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCee
Q 025509            2 DIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQLN   81 (251)
Q Consensus         2 ~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~id   81 (251)
                      +||||||+|+||++++++|+++|++|++++|.                       ++|++|.+++.+++++.     ++|
T Consensus         7 ~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~-----------------------~~D~~d~~~~~~~~~~~-----~~d   58 (287)
T 3sc6_A            7 RVIITGANGQLGKQLQEELNPEEYDIYPFDKK-----------------------LLDITNISQVQQVVQEI-----RPH   58 (287)
T ss_dssp             EEEEESTTSHHHHHHHHHSCTTTEEEEEECTT-----------------------TSCTTCHHHHHHHHHHH-----CCS
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCEEEEeccc-----------------------ccCCCCHHHHHHHHHhc-----CCC
Confidence            79999999999999999999999999999992                       26999999999988876     799


Q ss_pred             EEEEcCCCCCCCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccccCCCCC
Q 025509           82 ILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPS  161 (251)
Q Consensus        82 ~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~  161 (251)
                      +|||+||....  ...+++++..+++|+.++..+++++.+.          +.++|++||.+.... ..+.+   +++..
T Consensus        59 ~vi~~a~~~~~--~~~~~~~~~~~~~n~~~~~~l~~~~~~~----------~~~~v~~SS~~vy~~-~~~~~---~~E~~  122 (287)
T 3sc6_A           59 IIIHCAAYTKV--DQAEKERDLAYVINAIGARNVAVASQLV----------GAKLVYISTDYVFQG-DRPEG---YDEFH  122 (287)
T ss_dssp             EEEECCCCCCH--HHHTTCHHHHHHHHTHHHHHHHHHHHHH----------TCEEEEEEEGGGSCC-CCSSC---BCTTS
T ss_pred             EEEECCcccCh--HHHhcCHHHHHHHHHHHHHHHHHHHHHc----------CCeEEEEchhhhcCC-CCCCC---CCCCC
Confidence            99999997542  2234678899999999999999887543          248999999765432 22222   23333


Q ss_pred             CCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcc
Q 025509          162 GYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNII  209 (251)
Q Consensus       162 ~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~  209 (251)
                      +..+...|+.+|.+.+.+++.++.     .  .  ..+.|+.+.+|..
T Consensus       123 ~~~p~~~Y~~sK~~~E~~~~~~~~-----~--~--~ilR~~~v~G~~~  161 (287)
T 3sc6_A          123 NPAPINIYGASKYAGEQFVKELHN-----K--Y--FIVRTSWLYGKYG  161 (287)
T ss_dssp             CCCCCSHHHHHHHHHHHHHHHHCS-----S--E--EEEEECSEECSSS
T ss_pred             CCCCCCHHHHHHHHHHHHHHHhCC-----C--c--EEEeeeeecCCCC
Confidence            445567999999999988776543     1  3  4589999988753

>1z7e_A Protein aRNA; rossmann fold, OB-like fold, hydrolase; HET: ATP UGA; 3.00A {Escherichia coli} SCOP: b.46.1.1 c.2.1.2 c.65.1.1

Probab=99.76  E-value=5.3e-18  Score=158.48  Aligned_cols=178  Identities=14%  Similarity=0.025  Sum_probs=129.5

Q ss_pred             CEEEEECCCChhHHHHHHHHHHc-CCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHH-HHHHHHHHHhcCC
Q 025509            1 MDIVITGATSGIGTETARVLALR-GVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLAS-VRNFASEYNIQHH   78 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~-G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~-i~~~~~~~~~~~g   78 (251)
                      |+||||||+|+||++++++|+++ |++|++++|+.....+.       .....+.++.+|+++.++ +.++++       
T Consensus       316 ~~VLVTGatG~IG~~l~~~Ll~~~g~~V~~~~r~~~~~~~~-------~~~~~v~~v~~Dl~d~~~~~~~~~~-------  381 (660)
T 1z7e_A          316 TRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRF-------LNHPHFHFVEGDISIHSEWIEYHVK-------  381 (660)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHSSSEEEEEEESCCTTTGGG-------TTCTTEEEEECCTTTCHHHHHHHHH-------
T ss_pred             ceEEEEcCCcHHHHHHHHHHHhcCCCEEEEEEcCchhhhhh-------ccCCceEEEECCCCCcHHHHHHhhc-------
Confidence            47999999999999999999998 89999999987653221       113468899999998765 555554       


Q ss_pred             CeeEEEEcCCCCCCCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccccCC
Q 025509           79 QLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKIN  158 (251)
Q Consensus        79 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~  158 (251)
                      ++|+||||||...+.  ...++++..+++|+.++..+++++.+.         + ++||++||.+.... ..+.++++..
T Consensus       382 ~~D~Vih~Aa~~~~~--~~~~~~~~~~~~Nv~gt~~ll~aa~~~---------~-~r~V~~SS~~vyg~-~~~~~~~E~~  448 (660)
T 1z7e_A          382 KCDVVLPLVAIATPI--EYTRNPLRVFELDFEENLRIIRYCVKY---------R-KRIIFPSTSEVYGM-CSDKYFDEDH  448 (660)
T ss_dssp             HCSEEEECCCCCCTH--HHHHSHHHHHHHHTHHHHHHHHHHHHT---------T-CEEEEECCGGGGBT-CCSSSBCTTT
T ss_pred             CCCEEEECceecCcc--ccccCHHHHHHhhhHHHHHHHHHHHHh---------C-CEEEEEecHHHcCC-CCCcccCCCc
Confidence            589999999965421  123567889999999999888877542         2 69999999765432 1111222111


Q ss_pred             CC---CC-CCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCccc
Q 025509          159 DP---SG-YNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIR  210 (251)
Q Consensus       159 ~~---~~-~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~  210 (251)
                      ..   .+ ......|+.+|.+.+.+++.++.+.   |  ++++.+.||.+.++...
T Consensus       449 ~~~~~~p~~~p~~~Y~~sK~~~E~~~~~~~~~~---g--i~~~ilRpg~v~Gp~~~  499 (660)
T 1z7e_A          449 SNLIVGPVNKPRWIYSVSKQLLDRVIWAYGEKE---G--LQFTLFRPFNWMGPRLD  499 (660)
T ss_dssp             CCEEECCTTCTTHHHHHHHHHHHHHHHHHHHHH---C--CCEEEEEECSEESTTSS
T ss_pred             cccccCcccCCCCCcHHHHHHHHHHHHHHHHHc---C--CCEEEECCCcccCCCcc
Confidence            00   01 1234479999999999999998776   4  78888999999988753

>1n2s_A DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold, sugar-nucleotide-binding domain; HET: NAD; 2.00A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1kc1_A* 1kc3_A* 1kbz_A*

Probab=99.75  E-value=3.7e-18  Score=144.10  Aligned_cols=160  Identities=15%  Similarity=0.112  Sum_probs=120.5

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      |+||||||+|+||++++++|+ +|++|++++|+..                   ++.+|+++.+++.++++..     ++
T Consensus         1 m~ilVtGatG~iG~~l~~~L~-~g~~V~~~~r~~~-------------------~~~~D~~d~~~~~~~~~~~-----~~   55 (299)
T 1n2s_A            1 MNILLFGKTGQVGWELQRSLA-PVGNLIALDVHSK-------------------EFCGDFSNPKGVAETVRKL-----RP   55 (299)
T ss_dssp             CEEEEECTTSHHHHHHHHHTT-TTSEEEEECTTCS-------------------SSCCCTTCHHHHHHHHHHH-----CC
T ss_pred             CeEEEECCCCHHHHHHHHHhh-cCCeEEEeccccc-------------------cccccCCCHHHHHHHHHhc-----CC
Confidence            689999999999999999999 8999999999751                   2468999999999888764     69


Q ss_pred             eEEEEcCCCCCCCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccccCCCC
Q 025509           81 NILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDP  160 (251)
Q Consensus        81 d~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~  160 (251)
                      |+|||+||....  ..+.++++..+++|+.++..+++++.+.          +.++|++||.+..... .+.++   ++.
T Consensus        56 d~vih~a~~~~~--~~~~~~~~~~~~~n~~~~~~l~~a~~~~----------~~~~v~~SS~~vy~~~-~~~~~---~E~  119 (299)
T 1n2s_A           56 DVIVNAAAHTAV--DKAESEPELAQLLNATSVEAIAKAANET----------GAWVVHYSTDYVFPGT-GDIPW---QET  119 (299)
T ss_dssp             SEEEECCCCCCH--HHHTTCHHHHHHHHTHHHHHHHHHHTTT----------TCEEEEEEEGGGSCCC-TTCCB---CTT
T ss_pred             CEEEECcccCCH--hhhhcCHHHHHHHHHHHHHHHHHHHHHc----------CCcEEEEecccEEeCC-CCCCC---CCC
Confidence            999999996432  1234567889999999999988887432          2489999997654321 12222   222


Q ss_pred             CCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCccc
Q 025509          161 SGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIR  210 (251)
Q Consensus       161 ~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~  210 (251)
                      .+..+...|+.+|.+.+.+++.++.         +++.+.|+.+.++...
T Consensus       120 ~~~~p~~~Y~~sK~~~E~~~~~~~~---------~~~ilRp~~v~G~~~~  160 (299)
T 1n2s_A          120 DATSPLNVYGKTKLAGEKALQDNCP---------KHLIFRTSWVYAGKGN  160 (299)
T ss_dssp             SCCCCSSHHHHHHHHHHHHHHHHCS---------SEEEEEECSEECSSSC
T ss_pred             CCCCCccHHHHHHHHHHHHHHHhCC---------CeEEEeeeeecCCCcC
Confidence            3334456899999999988876542         3455999999988643

>4b8w_A GDP-L-fucose synthase; oxidoreductase; HET: NAP GDP; 2.75A {Homo sapiens}

Probab=99.75  E-value=6.7e-18  Score=143.04  Aligned_cols=170  Identities=16%  Similarity=0.093  Sum_probs=122.3

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      |+||||||+|+||++++++|+++|+      +....             ...+.++.+|++|.+++.++++..     ++
T Consensus         7 ~~vlVtGatG~iG~~l~~~L~~~g~------~~~~~-------------~~~~~~~~~D~~d~~~~~~~~~~~-----~~   62 (319)
T 4b8w_A            7 MRILVTGGSGLVGKAIQKVVADGAG------LPGED-------------WVFVSSKDADLTDTAQTRALFEKV-----QP   62 (319)
T ss_dssp             CEEEEETCSSHHHHHHHHHHHTTTC------CTTCE-------------EEECCTTTCCTTSHHHHHHHHHHS-----CC
T ss_pred             CeEEEECCCcHHHHHHHHHHHhcCC------ccccc-------------ccccCceecccCCHHHHHHHHhhc-----CC
Confidence            5899999999999999999999997      11000             123444578999999999888753     69


Q ss_pred             eEEEEcCCCCCCCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccccCCC-
Q 025509           81 NILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKIND-  159 (251)
Q Consensus        81 d~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~-  159 (251)
                      |+|||+|+.... ...+.++.+..+++|+.++..+++++...         +..+||++||.+... ...+.++++... 
T Consensus        63 d~Vih~A~~~~~-~~~~~~~~~~~~~~nv~gt~~ll~a~~~~---------~~~~~v~~SS~~vyg-~~~~~~~~E~~~~  131 (319)
T 4b8w_A           63 THVIHLAAMVGG-LFRNIKYNLDFWRKNVHMNDNVLHSAFEV---------GARKVVSCLSTCIFP-DKTTYPIDETMIH  131 (319)
T ss_dssp             SEEEECCCCCCC-HHHHTTCHHHHHHHHHHHHHHHHHHHHHT---------TCSEEEEECCGGGSC-SSCCSSBCGGGGG
T ss_pred             CEEEECceeccc-ccccccCHHHHHHHHHHHHHHHHHHHHHc---------CCCeEEEEcchhhcC-CCCCCCccccccc
Confidence            999999997432 12234567888999999999988886443         235899999975432 222223322110 


Q ss_pred             -CCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCccc
Q 025509          160 -PSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIR  210 (251)
Q Consensus       160 -~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~  210 (251)
                       ..+.+...+|+.+|.+.+.+++.++.+.   |  ++++.+.|+.+.+|...
T Consensus       132 ~~~~~p~~~~Y~~sK~~~E~~~~~~~~~~---~--~~~~ilRp~~v~Gp~~~  178 (319)
T 4b8w_A          132 NGPPHNSNFGYSYAKRMIDVQNRAYFQQY---G--CTFTAVIPTNVFGPHDN  178 (319)
T ss_dssp             BSCCCSSSHHHHHHHHHHHHHHHHHHHHH---C--CEEEEEEECEEECTTCC
T ss_pred             cCCCCCCcchHHHHHHHHHHHHHHHHHhh---C--CCEEEEeeccccCCCCC
Confidence             0122333469999999999999988776   4  78888999999988654

>4f6l_B AUSA reductase domain protein; thioester reductase, oxidoreductase; 3.86A {Staphylococcus aureus}

Probab=99.73  E-value=1.9e-17  Score=150.24  Aligned_cols=181  Identities=16%  Similarity=0.155  Sum_probs=128.0

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchh---HHHHHHHHHhhC-------CCCceEEEEecCCCHHHHHHHH
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAA---GKDVKETIVKEI-------PSAKVDAMELDLSSLASVRNFA   70 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~---~~~~~~~~~~~~-------~~~~v~~~~~D~~~~~~i~~~~   70 (251)
                      |+||||||+|+||++++++|.+.|++|++++|+...   ..++.+.+....       ...++.++.+|+++.+++.   
T Consensus       151 ~~VLVTGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~---  227 (508)
T 4f6l_B          151 GNTLLTGATGFLGAYLIEALQGYSHRIYCFIRADNEEIAWYKLMTNLNDYFSEETVEMMLSNIEVIVGDFECMDDVV---  227 (508)
T ss_dssp             EEEEESCTTSHHHHHHHHHTBTTEEEEEEEEESSSHHHHHHHHHHHHHHHSCHHHHHHHSTTEEEEEEBTTBCSSCC---
T ss_pred             CeEEEECCccchHHHHHHHHHhcCCEEEEEECCCChHHHHHHHHHHHHHhcccccchhccCceEEEecCCcccccCC---
Confidence            479999999999999999999899999999998773   233333332211       1457999999999977776   


Q ss_pred             HHHHhcCCCeeEEEEcCCCCCCCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccc--
Q 025509           71 SEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAY--  148 (251)
Q Consensus        71 ~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~--  148 (251)
                           ...++|+|||||+....     ..+++..+++|+.++..+++++.+    .      ..++|++||.+. ...  
T Consensus       228 -----~~~~~D~Vih~Aa~~~~-----~~~~~~~~~~Nv~gt~~ll~~a~~----~------~~~~v~iSS~~v-G~~~~  286 (508)
T 4f6l_B          228 -----LPENMDTIIHAGARTDH-----FGDDDEFEKVNVQGTVDVIRLAQQ----H------HARLIYVSTISV-GTYFD  286 (508)
T ss_dssp             -----CSSCCSEEEECCCC-------------CCHHHHHHHHHHHHHHHHT----T------TCEEEEEEESCT-TSEEC
T ss_pred             -----CccCCCEEEECCceecC-----CCCHHHHhhhHHHHHHHHHHHHHh----C------CCcEEEeCChhh-ccCCc
Confidence                 34589999999996531     234567789999999999988765    1      358999999876 211  


Q ss_pred             --cCCcccccCCCCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccC
Q 025509          149 --HEGIRFDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  211 (251)
Q Consensus       149 --~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  211 (251)
                        ..+.++.+-+...+......|+.+|.+.+.+++.++.    .|  ++++.+.||.|.++....
T Consensus       287 ~~~~~~~~~E~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~g--i~~~ilRp~~v~G~~~~~  345 (508)
T 4f6l_B          287 IDTEDVTFSEADVYKGQLLTSPYTRSKFYSELKVLEAVN----NG--LDGRIVRVGNLTSPYNGR  345 (508)
T ss_dssp             TTCSCCEECTTCSCSSBCCCSHHHHHHHHHHHHHHHHHH----TT--CEEEEEEECCEESCSSSC
T ss_pred             cCCcCcccccccccccccCCCcHHHHHHHHHHHHHHHHH----cC--CCEEEEecceeccCCCCC
Confidence              1122333222211233567899999999988887643    46  889999999998886544

>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}

Probab=99.73  E-value=1.8e-18  Score=147.19  Aligned_cols=173  Identities=18%  Similarity=0.032  Sum_probs=118.1

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      |+||||||+|+||++++++|+++|++|++++|+........+.+.+......+.++.+|++                 ++
T Consensus         8 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~-----------------~~   70 (321)
T 3vps_A            8 HRILITGGAGFIGGHLARALVASGEEVTVLDDLRVPPMIPPEGTGKFLEKPVLELEERDLS-----------------DV   70 (321)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCCEEEECCCSSCCSSCCTTSSEEECSCGGGCCHHHHT-----------------TE
T ss_pred             CeEEEECCCChHHHHHHHHHHHCCCEEEEEecCCcccccchhhhhhhccCCCeeEEeCccc-----------------cC
Confidence            5799999999999999999999999999999976510000000000001223455555554                 79


Q ss_pred             eEEEEcCCCCCCCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccccCCCC
Q 025509           81 NILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDP  160 (251)
Q Consensus        81 d~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~  160 (251)
                      |+|||+|+....  ....++....++ |+.++..+++++...         +..+||++||...... ....+   +++.
T Consensus        71 d~vi~~a~~~~~--~~~~~~~~~~~~-n~~~~~~ll~a~~~~---------~v~~~v~~SS~~v~~~-~~~~~---~~E~  134 (321)
T 3vps_A           71 RLVYHLASHKSV--PRSFKQPLDYLD-NVDSGRHLLALCTSV---------GVPKVVVGSTCEVYGQ-ADTLP---TPED  134 (321)
T ss_dssp             EEEEECCCCCCH--HHHTTSTTTTHH-HHHHHHHHHHHHHHH---------TCCEEEEEEEGGGGCS-CSSSS---BCTT
T ss_pred             CEEEECCccCCh--HHHHhCHHHHHH-HHHHHHHHHHHHHHc---------CCCeEEEecCHHHhCC-CCCCC---CCCC
Confidence            999999997542  111233344566 999998888887554         2359999999765432 22222   2333


Q ss_pred             CCCCcccccchhHHHHHHHHHHHHHHhccCCCcE-EEEEeeCCcccCCcccC
Q 025509          161 SGYNGFRAYSQSKLANILHANELARRLKEDGVDI-TANSVHPGAIATNIIRH  211 (251)
Q Consensus       161 ~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i-~v~~v~Pg~v~t~~~~~  211 (251)
                      .+..+...|+.+|.+.+.+++.++.+.   |  + +++.+.|+.+.+|....
T Consensus       135 ~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~--~~~~~ilRp~~v~G~~~~~  181 (321)
T 3vps_A          135 SPLSPRSPYAASKVGLEMVAGAHQRAS---V--APEVGIVRFFNVYGPGERP  181 (321)
T ss_dssp             SCCCCCSHHHHHHHHHHHHHHHHHHSS---S--SCEEEEEEECEEECTTCCT
T ss_pred             CCCCCCChhHHHHHHHHHHHHHHHHHc---C--CCceEEEEeccccCcCCCC
Confidence            344456789999999999988888764   4  7 88889999999887654

>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D

Probab=99.71  E-value=7.8e-17  Score=135.21  Aligned_cols=145  Identities=16%  Similarity=0.143  Sum_probs=111.7

Q ss_pred             CEEEEECCCChhHHHHHHHHHHc--CCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCC
Q 025509            1 MDIVITGATSGIGTETARVLALR--GVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHH   78 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~--G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g   78 (251)
                      |+||||||+|+||++++++|+++  |++|++++|+..+.....        ...+.++.+|++|.+++.++++       
T Consensus         1 ~~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~l~--------~~~~~~~~~D~~d~~~l~~~~~-------   65 (287)
T 2jl1_A            1 FSIAVTGATGQLGGLVIQHLLKKVPASQIIAIVRNVEKASTLA--------DQGVEVRHGDYNQPESLQKAFA-------   65 (287)
T ss_dssp             CCEEETTTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTTHHHH--------HTTCEEEECCTTCHHHHHHHTT-------
T ss_pred             CeEEEEcCCchHHHHHHHHHHHhCCCCeEEEEEcCHHHHhHHh--------hcCCeEEEeccCCHHHHHHHHh-------
Confidence            67999999999999999999998  999999999876654332        1357889999999988887664       


Q ss_pred             CeeEEEEcCCCCCCCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccccCC
Q 025509           79 QLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKIN  158 (251)
Q Consensus        79 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~  158 (251)
                      ++|+|||+|+..       .++     ++|+.++..+++++..    .     +.++||++||.+...            
T Consensus        66 ~~d~vi~~a~~~-------~~~-----~~n~~~~~~l~~a~~~----~-----~~~~~v~~Ss~~~~~------------  112 (287)
T 2jl1_A           66 GVSKLLFISGPH-------YDN-----TLLIVQHANVVKAARD----A-----GVKHIAYTGYAFAEE------------  112 (287)
T ss_dssp             TCSEEEECCCCC-------SCH-----HHHHHHHHHHHHHHHH----T-----TCSEEEEEEETTGGG------------
T ss_pred             cCCEEEEcCCCC-------cCc-----hHHHHHHHHHHHHHHH----c-----CCCEEEEECCCCCCC------------
Confidence            589999999852       111     5788888877777643    2     246999999976421            


Q ss_pred             CCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCc
Q 025509          159 DPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNI  208 (251)
Q Consensus       159 ~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~  208 (251)
                            ....|+.+|.+.+.+.+.       .|  ++++.+.||.+.++.
T Consensus       113 ------~~~~y~~~K~~~E~~~~~-------~~--~~~~ilrp~~~~~~~  147 (287)
T 2jl1_A          113 ------SIIPLAHVHLATEYAIRT-------TN--IPYTFLRNALYTDFF  147 (287)
T ss_dssp             ------CCSTHHHHHHHHHHHHHH-------TT--CCEEEEEECCBHHHH
T ss_pred             ------CCCchHHHHHHHHHHHHH-------cC--CCeEEEECCEecccc
Confidence                  113799999999887752       46  788889999987764

>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}

Probab=99.67  E-value=1.7e-17  Score=139.41  Aligned_cols=160  Identities=16%  Similarity=0.026  Sum_probs=115.8

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      |+||||| +|+||++++++|+++|++|++++|+....            ...+.++.+|+++.+++.++++      +++
T Consensus         4 ~~ilVtG-aG~iG~~l~~~L~~~g~~V~~~~r~~~~~------------~~~~~~~~~Dl~d~~~~~~~~~------~~~   64 (286)
T 3gpi_A            4 SKILIAG-CGDLGLELARRLTAQGHEVTGLRRSAQPM------------PAGVQTLIADVTRPDTLASIVH------LRP   64 (286)
T ss_dssp             CCEEEEC-CSHHHHHHHHHHHHTTCCEEEEECTTSCC------------CTTCCEEECCTTCGGGCTTGGG------GCC
T ss_pred             CcEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCcccc------------ccCCceEEccCCChHHHHHhhc------CCC
Confidence            5799999 59999999999999999999999986541            3568899999999988877654      269


Q ss_pred             eEEEEcCCCCCCCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccccCCCC
Q 025509           81 NILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDP  160 (251)
Q Consensus        81 d~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~  160 (251)
                      |+|||+|+..       ..+++..+++|+.++..+++++..    .     +.++||++||.+... ...+.++   ++.
T Consensus        65 d~vih~a~~~-------~~~~~~~~~~n~~~~~~ll~a~~~----~-----~~~~~v~~SS~~vyg-~~~~~~~---~E~  124 (286)
T 3gpi_A           65 EILVYCVAAS-------EYSDEHYRLSYVEGLRNTLSALEG----A-----PLQHVFFVSSTGVYG-QEVEEWL---DED  124 (286)
T ss_dssp             SEEEECHHHH-------HHC-----CCSHHHHHHHHHHTTT----S-----CCCEEEEEEEGGGCC-CCCSSEE---CTT
T ss_pred             CEEEEeCCCC-------CCCHHHHHHHHHHHHHHHHHHHhh----C-----CCCEEEEEcccEEEc-CCCCCCC---CCC
Confidence            9999999852       244667788999999888887752    1     346999999976443 2222222   233


Q ss_pred             CCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCccc
Q 025509          161 SGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIR  210 (251)
Q Consensus       161 ~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~  210 (251)
                      .+..+...|+.+|.+.+.+ +..          ++++.+.|+.+.++...
T Consensus       125 ~~~~p~~~Y~~sK~~~E~~-~~~----------~~~~ilR~~~v~G~~~~  163 (286)
T 3gpi_A          125 TPPIAKDFSGKRMLEAEAL-LAA----------YSSTILRFSGIYGPGRL  163 (286)
T ss_dssp             SCCCCCSHHHHHHHHHHHH-GGG----------SSEEEEEECEEEBTTBC
T ss_pred             CCCCCCChhhHHHHHHHHH-Hhc----------CCeEEEecccccCCCch
Confidence            3444567899999998876 432          34556999999887643

>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A

Probab=99.67  E-value=5.6e-16  Score=130.92  Aligned_cols=156  Identities=14%  Similarity=0.045  Sum_probs=108.8

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcC-CEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCC
Q 025509            1 MDIVITGATSGIGTETARVLALRG-VHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQ   79 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G-~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~   79 (251)
                      |+||||||+|+||++++++|+++| ++|++++|++.+...  +.+..    ..+.++.+|++|++++.++++       +
T Consensus         6 ~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~R~~~~~~~--~~l~~----~~~~~~~~D~~d~~~l~~~~~-------~   72 (299)
T 2wm3_A            6 KLVVVFGGTGAQGGSVARTLLEDGTFKVRVVTRNPRKKAA--KELRL----QGAEVVQGDQDDQVIMELALN-------G   72 (299)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHCSSEEEEEESCTTSHHH--HHHHH----TTCEEEECCTTCHHHHHHHHT-------T
T ss_pred             CEEEEECCCchHHHHHHHHHHhcCCceEEEEEcCCCCHHH--HHHHH----CCCEEEEecCCCHHHHHHHHh-------c
Confidence            579999999999999999999998 999999998765421  22221    357889999999999887765       5


Q ss_pred             eeEEEEcCCCCCCCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccccCCC
Q 025509           80 LNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKIND  159 (251)
Q Consensus        80 id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~  159 (251)
                      +|+||||++.....          ..+.|+.++    +.+++.+++.     +.++||++|+..... ..          
T Consensus        73 ~d~vi~~a~~~~~~----------~~~~~~~~~----~~~~~aa~~~-----gv~~iv~~S~~~~~~-~~----------  122 (299)
T 2wm3_A           73 AYATFIVTNYWESC----------SQEQEVKQG----KLLADLARRL-----GLHYVVYSGLENIKK-LT----------  122 (299)
T ss_dssp             CSEEEECCCHHHHT----------CHHHHHHHH----HHHHHHHHHH-----TCSEEEECCCCCHHH-HT----------
T ss_pred             CCEEEEeCCCCccc----------cchHHHHHH----HHHHHHHHHc-----CCCEEEEEcCccccc-cC----------
Confidence            89999999842110          123454444    4444444443     346899966543221 00          


Q ss_pred             CCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCccc
Q 025509          160 PSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIR  210 (251)
Q Consensus       160 ~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~  210 (251)
                        .......|+.+|.+++.+.+.       .|  ++++.|.||++.+++..
T Consensus       123 --~~~~~~~y~~sK~~~e~~~~~-------~g--i~~~ilrp~~~~~~~~~  162 (299)
T 2wm3_A          123 --AGRLAAAHFDGKGEVEEYFRD-------IG--VPMTSVRLPCYFENLLS  162 (299)
T ss_dssp             --TTSCCCHHHHHHHHHHHHHHH-------HT--CCEEEEECCEEGGGGGT
T ss_pred             --CCcccCchhhHHHHHHHHHHH-------CC--CCEEEEeecHHhhhchh
Confidence              011235799999999887754       25  78888999999887643

>1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A*

Probab=99.66  E-value=1.6e-15  Score=131.48  Aligned_cols=149  Identities=21%  Similarity=0.191  Sum_probs=106.8

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEec-CCCHHHHHHHHHHHHhcCCC
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELD-LSSLASVRNFASEYNIQHHQ   79 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D-~~~~~~i~~~~~~~~~~~g~   79 (251)
                      |+||||||+|+||++++++|+++|++|++++|+..+..  .+.+.+   ...+.++.+| ++|.+++.++++       .
T Consensus         6 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~--~~~l~~---~~~v~~v~~D~l~d~~~l~~~~~-------~   73 (352)
T 1xgk_A            6 KTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLI--AEELQA---IPNVTLFQGPLLNNVPLMDTLFE-------G   73 (352)
T ss_dssp             CCEEEESTTSHHHHHHHHHHHHTTCCEEEEESCSCSHH--HHHHHT---STTEEEEESCCTTCHHHHHHHHT-------T
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCCChhh--HHHHhh---cCCcEEEECCccCCHHHHHHHHh-------c
Confidence            57999999999999999999999999999999876542  122221   2358889999 999999887765       5


Q ss_pred             eeEEEEcCCCCCCCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCC-CceEEEEcCccc-cccccCCcccccC
Q 025509           80 LNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGG-EGRIINVSSEGH-RLAYHEGIRFDKI  157 (251)
Q Consensus        80 id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~-~g~iv~vsS~~~-~~~~~~~~~~~~~  157 (251)
                      +|+||||++...      .       +.|..+     +.+++.+++.     + .++||++||... ..           
T Consensus        74 ~d~Vi~~a~~~~------~-------~~~~~~-----~~l~~aa~~~-----g~v~~~V~~SS~~~~~~-----------  119 (352)
T 1xgk_A           74 AHLAFINTTSQA------G-------DEIAIG-----KDLADAAKRA-----GTIQHYIYSSMPDHSLY-----------  119 (352)
T ss_dssp             CSEEEECCCSTT------S-------CHHHHH-----HHHHHHHHHH-----SCCSEEEEEECCCGGGT-----------
T ss_pred             CCEEEEcCCCCC------c-------HHHHHH-----HHHHHHHHHc-----CCccEEEEeCCcccccc-----------
Confidence            899999997421      0       124333     4444444443     2 469999999762 22           


Q ss_pred             CCCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCc
Q 025509          158 NDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNI  208 (251)
Q Consensus       158 ~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~  208 (251)
                          +......|+.+|.+.+.+++.+       |  ++++.|+||.+-++.
T Consensus       120 ----~~~~~~~y~~sK~~~E~~~~~~-------g--i~~~ivrpg~~g~~~  157 (352)
T 1xgk_A          120 ----GPWPAVPMWAPKFTVENYVRQL-------G--LPSTFVYAGIYNNNF  157 (352)
T ss_dssp             ----SSCCCCTTTHHHHHHHHHHHTS-------S--SCEEEEEECEEGGGC
T ss_pred             ----CCCCCccHHHHHHHHHHHHHHc-------C--CCEEEEecceecCCc
Confidence                1123357999999999887652       5  778889999775443

>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A*

Probab=99.66  E-value=6.4e-16  Score=129.43  Aligned_cols=142  Identities=18%  Similarity=0.122  Sum_probs=103.2

Q ss_pred             EEEEECCCChhHHHHHHHHHHc--CCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCC
Q 025509            2 DIVITGATSGIGTETARVLALR--GVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQ   79 (251)
Q Consensus         2 ~vlItG~s~gIG~a~a~~l~~~--G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~   79 (251)
                      +||||||+|+||++++++|+++  |++|++++|++.+.+...        ...+.++.+|++|.+++.++++       +
T Consensus         1 ~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~--------~~~~~~~~~D~~d~~~~~~~~~-------~   65 (286)
T 2zcu_A            1 MIAITGATGQLGHYVIESLMKTVPASQIVAIVRNPAKAQALA--------AQGITVRQADYGDEAALTSALQ-------G   65 (286)
T ss_dssp             CEEEESTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTCHHHH--------HTTCEEEECCTTCHHHHHHHTT-------T
T ss_pred             CEEEEcCCchHHHHHHHHHHhhCCCceEEEEEcChHhhhhhh--------cCCCeEEEcCCCCHHHHHHHHh-------C
Confidence            4899999999999999999998  999999999876654332        1357889999999988887654       5


Q ss_pred             eeEEEEcCCCCCCCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccccCCC
Q 025509           80 LNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKIND  159 (251)
Q Consensus        80 id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~  159 (251)
                      +|+|||+|+...              +.|+.++..+++++    .+.     +.++||++||.++..             
T Consensus        66 ~d~vi~~a~~~~--------------~~~~~~~~~l~~a~----~~~-----~~~~~v~~Ss~~~~~-------------  109 (286)
T 2zcu_A           66 VEKLLLISSSEV--------------GQRAPQHRNVINAA----KAA-----GVKFIAYTSLLHADT-------------  109 (286)
T ss_dssp             CSEEEECC----------------------CHHHHHHHHH----HHH-----TCCEEEEEEETTTTT-------------
T ss_pred             CCEEEEeCCCCc--------------hHHHHHHHHHHHHH----HHc-----CCCEEEEECCCCCCC-------------
Confidence            899999998421              12555555555544    333     246999999965431             


Q ss_pred             CCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCc
Q 025509          160 PSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNI  208 (251)
Q Consensus       160 ~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~  208 (251)
                           ....|+.+|.+.+.+.+.       .|  ++++.+.||++.+++
T Consensus       110 -----~~~~y~~sK~~~e~~~~~-------~~--~~~~ilrp~~~~~~~  144 (286)
T 2zcu_A          110 -----SPLGLADEHIETEKMLAD-------SG--IVYTLLRNGWYSENY  144 (286)
T ss_dssp             -----CCSTTHHHHHHHHHHHHH-------HC--SEEEEEEECCBHHHH
T ss_pred             -----CcchhHHHHHHHHHHHHH-------cC--CCeEEEeChHHhhhh
Confidence                 113799999999887753       35  888899999887664

>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}

Probab=99.64  E-value=3.7e-15  Score=124.92  Aligned_cols=154  Identities=11%  Similarity=0.039  Sum_probs=108.4

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      |+|||||+ |+||++++++|+++|++|++++|+..+......        ..+.++.+|+++.+            ..++
T Consensus         6 ~~ilVtGa-G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~--------~~~~~~~~D~~d~~------------~~~~   64 (286)
T 3ius_A            6 GTLLSFGH-GYTARVLSRALAPQGWRIIGTSRNPDQMEAIRA--------SGAEPLLWPGEEPS------------LDGV   64 (286)
T ss_dssp             CEEEEETC-CHHHHHHHHHHGGGTCEEEEEESCGGGHHHHHH--------TTEEEEESSSSCCC------------CTTC
T ss_pred             CcEEEECC-cHHHHHHHHHHHHCCCEEEEEEcChhhhhhHhh--------CCCeEEEecccccc------------cCCC
Confidence            57999998 999999999999999999999999877654432        35899999999832            3579


Q ss_pred             eEEEEcCCCCCCCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccccCCCC
Q 025509           81 NILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDP  160 (251)
Q Consensus        81 d~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~  160 (251)
                      |+|||+|+.....     +.              .++.++..+.+..   .+..++|++||.+... ...+.+++   +.
T Consensus        65 d~vi~~a~~~~~~-----~~--------------~~~~l~~a~~~~~---~~~~~~v~~Ss~~vyg-~~~~~~~~---E~  118 (286)
T 3ius_A           65 THLLISTAPDSGG-----DP--------------VLAALGDQIAARA---AQFRWVGYLSTTAVYG-DHDGAWVD---ET  118 (286)
T ss_dssp             CEEEECCCCBTTB-----CH--------------HHHHHHHHHHHTG---GGCSEEEEEEEGGGGC-CCTTCEEC---TT
T ss_pred             CEEEECCCccccc-----cH--------------HHHHHHHHHHhhc---CCceEEEEeecceecC-CCCCCCcC---CC
Confidence            9999999953321     11              0133444444410   0246999999975432 22222332   23


Q ss_pred             CCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcc
Q 025509          161 SGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNII  209 (251)
Q Consensus       161 ~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~  209 (251)
                      .+..+...|+.+|.+.+.+.+.+      .|  ++++.+.|+.+.++..
T Consensus       119 ~~~~p~~~Y~~sK~~~E~~~~~~------~~--~~~~ilRp~~v~G~~~  159 (286)
T 3ius_A          119 TPLTPTAARGRWRVMAEQQWQAV------PN--LPLHVFRLAGIYGPGR  159 (286)
T ss_dssp             SCCCCCSHHHHHHHHHHHHHHHS------TT--CCEEEEEECEEEBTTB
T ss_pred             CCCCCCCHHHHHHHHHHHHHHhh------cC--CCEEEEeccceECCCc
Confidence            34445568999999998877766      45  7888899999988753

>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*

Probab=99.63  E-value=6e-15  Score=127.24  Aligned_cols=152  Identities=15%  Similarity=0.041  Sum_probs=108.4

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCch----hHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhc
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIA----AGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQ   76 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~----~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~   76 (251)
                      |+||||||+|+||++++++|++.|++|++++|+..    +.+. .+.+.    ...+.++.+|++|.+++.+++++.   
T Consensus        11 ~~IlVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~-~~~l~----~~~v~~~~~Dl~d~~~l~~~~~~~---   82 (346)
T 3i6i_A           11 GRVLIAGATGFIGQFVATASLDAHRPTYILARPGPRSPSKAKI-FKALE----DKGAIIVYGLINEQEAMEKILKEH---   82 (346)
T ss_dssp             CCEEEECTTSHHHHHHHHHHHHTTCCEEEEECSSCCCHHHHHH-HHHHH----HTTCEEEECCTTCHHHHHHHHHHT---
T ss_pred             CeEEEECCCcHHHHHHHHHHHHCCCCEEEEECCCCCChhHHHH-HHHHH----hCCcEEEEeecCCHHHHHHHHhhC---
Confidence            47999999999999999999999999999999762    2221 12222    346899999999999999988763   


Q ss_pred             CCCeeEEEEcCCCCCCCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCccccc
Q 025509           77 HHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDK  156 (251)
Q Consensus        77 ~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~  156 (251)
                        ++|+|||+++..                 |+.++..+++++...-        .-.++|. |+. +..          
T Consensus        83 --~~d~Vi~~a~~~-----------------n~~~~~~l~~aa~~~g--------~v~~~v~-S~~-g~~----------  123 (346)
T 3i6i_A           83 --EIDIVVSTVGGE-----------------SILDQIALVKAMKAVG--------TIKRFLP-SEF-GHD----------  123 (346)
T ss_dssp             --TCCEEEECCCGG-----------------GGGGHHHHHHHHHHHC--------CCSEEEC-SCC-SSC----------
T ss_pred             --CCCEEEECCchh-----------------hHHHHHHHHHHHHHcC--------CceEEee-ccc-CCC----------
Confidence              799999999851                 6666666666654331        1346664 432 211          


Q ss_pred             CCCCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCc
Q 025509          157 INDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNI  208 (251)
Q Consensus       157 ~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~  208 (251)
                      .++..+.+....|+.+|.+++.+.+.       .|  +.+..|+||++.+..
T Consensus       124 ~~e~~~~~p~~~y~~sK~~~e~~l~~-------~g--~~~tivrpg~~~g~~  166 (346)
T 3i6i_A          124 VNRADPVEPGLNMYREKRRVRQLVEE-------SG--IPFTYICCNSIASWP  166 (346)
T ss_dssp             TTTCCCCTTHHHHHHHHHHHHHHHHH-------TT--CCBEEEECCEESSCC
T ss_pred             CCccCcCCCcchHHHHHHHHHHHHHH-------cC--CCEEEEEeccccccc
Confidence            11222445567899999998776654       45  777779999887754

>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}

Probab=99.63  E-value=2.5e-15  Score=126.24  Aligned_cols=147  Identities=20%  Similarity=0.182  Sum_probs=102.7

Q ss_pred             CEEEEECCCChhHHHHHHHHHHc-CCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCC
Q 025509            1 MDIVITGATSGIGTETARVLALR-GVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQ   79 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~-G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~   79 (251)
                      |+||||||+|+||++++++|++. |++|++++|++.+....        ....+.++.+|++|++++.++++       +
T Consensus         1 M~ilVtGatG~iG~~l~~~L~~~~g~~V~~~~R~~~~~~~~--------~~~~v~~~~~D~~d~~~l~~~~~-------~   65 (289)
T 3e48_A            1 MNIMLTGATGHLGTHITNQAIANHIDHFHIGVRNVEKVPDD--------WRGKVSVRQLDYFNQESMVEAFK-------G   65 (289)
T ss_dssp             CCEEEETTTSHHHHHHHHHHHHTTCTTEEEEESSGGGSCGG--------GBTTBEEEECCTTCHHHHHHHTT-------T
T ss_pred             CEEEEEcCCchHHHHHHHHHhhCCCCcEEEEECCHHHHHHh--------hhCCCEEEEcCCCCHHHHHHHHh-------C
Confidence            67999999999999999999998 99999999987664322        13568999999999998887664       6


Q ss_pred             eeEEEEcCCCCCCCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccccCCC
Q 025509           80 LNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKIND  159 (251)
Q Consensus        80 id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~  159 (251)
                      +|+||||||...+            ...|+.++.    .+++.+++.     +.++||++||.+...             
T Consensus        66 ~d~vi~~a~~~~~------------~~~~~~~~~----~l~~aa~~~-----gv~~iv~~Ss~~~~~-------------  111 (289)
T 3e48_A           66 MDTVVFIPSIIHP------------SFKRIPEVE----NLVYAAKQS-----GVAHIIFIGYYADQH-------------  111 (289)
T ss_dssp             CSEEEECCCCCCS------------HHHHHHHHH----HHHHHHHHT-----TCCEEEEEEESCCST-------------
T ss_pred             CCEEEEeCCCCcc------------chhhHHHHH----HHHHHHHHc-----CCCEEEEEcccCCCC-------------
Confidence            8999999985321            112455544    444455443     346999999954211             


Q ss_pred             CCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcc
Q 025509          160 PSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNII  209 (251)
Q Consensus       160 ~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~  209 (251)
                            ..+|..++...     .+...+...|  ++++.+.||++.+++.
T Consensus       112 ------~~~~~~~~~~~-----~~e~~~~~~g--~~~~ilrp~~~~~~~~  148 (289)
T 3e48_A          112 ------NNPFHMSPYFG-----YASRLLSTSG--IDYTYVRMAMYMDPLK  148 (289)
T ss_dssp             ------TCCSTTHHHHH-----HHHHHHHHHC--CEEEEEEECEESTTHH
T ss_pred             ------CCCCccchhHH-----HHHHHHHHcC--CCEEEEeccccccccH
Confidence                  12333333221     2333344556  8899999999988753

>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}

Probab=99.61  E-value=1e-14  Score=123.43  Aligned_cols=150  Identities=17%  Similarity=0.147  Sum_probs=101.0

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCc-------hhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHH
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDI-------AAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEY   73 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~-------~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~   73 (251)
                      |+||||||+|+||++++++|+++|++|++.+|+.       ++.+.. +.+.    ...+.++.+|++|.+++.++++  
T Consensus         3 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~-~~l~----~~~v~~v~~D~~d~~~l~~~~~--   75 (307)
T 2gas_A            3 NKILILGPTGAIGRHIVWASIKAGNPTYALVRKTITAANPETKEELI-DNYQ----SLGVILLEGDINDHETLVKAIK--   75 (307)
T ss_dssp             CCEEEESTTSTTHHHHHHHHHHHTCCEEEEECCSCCSSCHHHHHHHH-HHHH----HTTCEEEECCTTCHHHHHHHHT--
T ss_pred             cEEEEECCCchHHHHHHHHHHhCCCcEEEEECCCcccCChHHHHHHH-HHHH----hCCCEEEEeCCCCHHHHHHHHh--
Confidence            5799999999999999999999999999999986       333332 2222    2358889999999998887765  


Q ss_pred             HhcCCCeeEEEEcCCCCCCCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCC-CceEEEEcCccccccccCCc
Q 025509           74 NIQHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGG-EGRIINVSSEGHRLAYHEGI  152 (251)
Q Consensus        74 ~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~-~g~iv~vsS~~~~~~~~~~~  152 (251)
                           ++|+|||++|...                 +.++..+    ++.+++.     + -.++| . |..+...  .  
T Consensus        76 -----~~d~vi~~a~~~~-----------------~~~~~~l----~~aa~~~-----g~v~~~v-~-S~~g~~~--~--  118 (307)
T 2gas_A           76 -----QVDIVICAAGRLL-----------------IEDQVKI----IKAIKEA-----GNVKKFF-P-SEFGLDV--D--  118 (307)
T ss_dssp             -----TCSEEEECSSSSC-----------------GGGHHHH----HHHHHHH-----CCCSEEE-C-SCCSSCT--T--
T ss_pred             -----CCCEEEECCcccc-----------------cccHHHH----HHHHHhc-----CCceEEe-e-cccccCc--c--
Confidence                 5899999998532                 2223333    3344443     2 35776 3 4332110  0  


Q ss_pred             ccccCCCCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcc
Q 025509          153 RFDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNII  209 (251)
Q Consensus       153 ~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~  209 (251)
                         +  .....+....| .+|.+++.+.+.       .|  ++++.++||++.+++.
T Consensus       119 ---~--~~~~~p~~~~y-~sK~~~e~~~~~-------~~--i~~~~lrp~~~~~~~~  160 (307)
T 2gas_A          119 ---R--HDAVEPVRQVF-EEKASIRRVIEA-------EG--VPYTYLCCHAFTGYFL  160 (307)
T ss_dssp             ---S--CCCCTTHHHHH-HHHHHHHHHHHH-------HT--CCBEEEECCEETTTTG
T ss_pred             ---c--ccCCCcchhHH-HHHHHHHHHHHH-------cC--CCeEEEEcceeecccc
Confidence               0  00122335678 999998876652       25  7777899999987654

>2v6g_A Progesterone 5-beta-reductase; tyrosine-dependent oxidoreductase, oxidoreductase, SDR, cardenolides, cardiac glycosides; HET: NAP; 2.3A {Digitalis lanata} PDB: 2v6f_A*

Probab=99.59  E-value=5.4e-15  Score=127.95  Aligned_cols=173  Identities=13%  Similarity=-0.001  Sum_probs=115.7

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcC-----CEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHh
Q 025509            1 MDIVITGATSGIGTETARVLALRG-----VHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNI   75 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G-----~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~   75 (251)
                      |+||||||+|+||++++++|+++|     ++|++++|+.....         .....+.++.+|+++.+++.++++.   
T Consensus         2 ~~vlVtGatG~iG~~l~~~L~~~g~~~~~~~V~~~~r~~~~~~---------~~~~~~~~~~~Dl~d~~~~~~~~~~---   69 (364)
T 2v6g_A            2 SVALIVGVTGIIGNSLAEILPLADTPGGPWKVYGVARRTRPAW---------HEDNPINYVQCDISDPDDSQAKLSP---   69 (364)
T ss_dssp             EEEEEETTTSHHHHHHHHHTTSTTCTTCSEEEEEEESSCCCSC---------CCSSCCEEEECCTTSHHHHHHHHTT---
T ss_pred             CEEEEECCCcHHHHHHHHHHHhCCCCCCceEEEEEeCCCCccc---------cccCceEEEEeecCCHHHHHHHHhc---
Confidence            579999999999999999999999     99999999865422         1134688999999999988876653   


Q ss_pred             cCCCeeEEEEcCCCCCCCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEE-------EEcCccccccc
Q 025509           76 QHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRII-------NVSSEGHRLAY  148 (251)
Q Consensus        76 ~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv-------~vsS~~~~~~~  148 (251)
                       .+++|+|||+||...       ++++..+++|+.++..+++++.+...       +..++|       ++||.+.....
T Consensus        70 -~~~~d~vih~a~~~~-------~~~~~~~~~n~~~~~~l~~a~~~~~~-------~~~~~v~~~g~~i~~Ss~~vyg~~  134 (364)
T 2v6g_A           70 -LTDVTHVFYVTWANR-------STEQENCEANSKMFRNVLDAVIPNCP-------NLKHISLQTGRKHYMGPFESYGKI  134 (364)
T ss_dssp             -CTTCCEEEECCCCCC-------SSHHHHHHHHHHHHHHHHHHHTTTCT-------TCCEEEEECCTHHHHCCGGGTTTS
T ss_pred             -CCCCCEEEECCCCCc-------chHHHHHHHhHHHHHHHHHHHHHhcc-------ccceEEeccCceEEEechhhcccc
Confidence             224999999999632       35778899999999999988765411       134676       67776543211


Q ss_pred             c-CCcccccCCCCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCccc
Q 025509          149 H-EGIRFDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIR  210 (251)
Q Consensus       149 ~-~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~  210 (251)
                      . ...++++.....  +....|.    +.+.+.+.++.+.+  +  +++..+.|+.+..+...
T Consensus       135 ~~~~~~~~E~~~~~--~~~~~y~----~~E~~~~~~~~~~~--~--~~~~ilRp~~v~G~~~~  187 (364)
T 2v6g_A          135 ESHDPPYTEDLPRL--KYMNFYY----DLEDIMLEEVEKKE--G--LTWSVHRPGNIFGFSPY  187 (364)
T ss_dssp             CCCCSSBCTTSCCC--SSCCHHH----HHHHHHHHHHTTST--T--CEEEEEEESSEECCCTT
T ss_pred             ccCCCCCCccccCC--ccchhhH----HHHHHHHHHhhcCC--C--ceEEEECCCceeCCCCC
Confidence            1 112222211111  1233562    23433333332211  3  77888999999987654

>3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum}

Probab=99.58  E-value=6.2e-15  Score=133.96  Aligned_cols=164  Identities=15%  Similarity=0.066  Sum_probs=113.3

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      |+||||||+|+||++++++|+++|++|++++|+..+.                ..+.+|+.+.         ..+...++
T Consensus       148 m~VLVTGatG~IG~~l~~~L~~~G~~V~~l~R~~~~~----------------~~v~~d~~~~---------~~~~l~~~  202 (516)
T 3oh8_A          148 LTVAITGSRGLVGRALTAQLQTGGHEVIQLVRKEPKP----------------GKRFWDPLNP---------ASDLLDGA  202 (516)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSSCCT----------------TCEECCTTSC---------CTTTTTTC
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCCc----------------cceeecccch---------hHHhcCCC
Confidence            5899999999999999999999999999999986541                1256777642         12233589


Q ss_pred             eEEEEcCCCCCCCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccccCCCC
Q 025509           81 NILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDP  160 (251)
Q Consensus        81 d~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~  160 (251)
                      |+|||+||..... ..+.+..+..+++|+.++..+++++..   ..     +.++||++||.+.+.....+.++++   .
T Consensus       203 D~Vih~A~~~~~~-~~~~~~~~~~~~~Nv~gt~~ll~a~a~---~~-----~~~r~V~~SS~~vyg~~~~~~~~~E---~  270 (516)
T 3oh8_A          203 DVLVHLAGEPIFG-RFNDSHKEAIRESRVLPTKFLAELVAE---ST-----QCTTMISASAVGFYGHDRGDEILTE---E  270 (516)
T ss_dssp             SEEEECCCC------CCGGGHHHHHHHTHHHHHHHHHHHHH---CS-----SCCEEEEEEEGGGGCSEEEEEEECT---T
T ss_pred             CEEEECCCCcccc-ccchhHHHHHHHHHHHHHHHHHHHHHh---cC-----CCCEEEEeCcceEecCCCCCCccCC---C
Confidence            9999999964322 345667888999999999999887432   11     3469999999765431222222222   2


Q ss_pred             CCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCc
Q 025509          161 SGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNI  208 (251)
Q Consensus       161 ~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~  208 (251)
                      .+. +...|+.+|...+.+.    .+....|  ++++.+.||.+.++.
T Consensus       271 ~~~-~~~~y~~~~~~~E~~~----~~~~~~g--i~~~ilRp~~v~Gp~  311 (516)
T 3oh8_A          271 SES-GDDFLAEVCRDWEHAT----APASDAG--KRVAFIRTGVALSGR  311 (516)
T ss_dssp             SCC-CSSHHHHHHHHHHHTT----HHHHHTT--CEEEEEEECEEEBTT
T ss_pred             CCC-CcChHHHHHHHHHHHH----HHHHhCC--CCEEEEEeeEEECCC
Confidence            222 4456887887766543    3344567  899999999999876

>3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A

Probab=99.58  E-value=1.7e-15  Score=131.78  Aligned_cols=139  Identities=18%  Similarity=0.088  Sum_probs=108.2

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCC-EEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCC
Q 025509            1 MDIVITGATSGIGTETARVLALRGV-HVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQ   79 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~   79 (251)
                      |+||||||+|+||++++++|+++|+ +|+..+|+                           ++.+++.++++       +
T Consensus         1 M~VlVtGatG~iG~~l~~~L~~~g~~~v~~~d~~---------------------------~d~~~l~~~~~-------~   46 (369)
T 3st7_A            1 MNIVITGAKGFVGKNLKADLTSTTDHHIFEVHRQ---------------------------TKEEELESALL-------K   46 (369)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHCCCEEEECCTT---------------------------CCHHHHHHHHH-------H
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCCEEEEECCC---------------------------CCHHHHHHHhc-------c
Confidence            6899999999999999999999998 77776664                           67788887776       4


Q ss_pred             eeEEEEcCCCCCCCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccccCCC
Q 025509           80 LNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKIND  159 (251)
Q Consensus        80 id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~  159 (251)
                      +|+|||+||...+      ++++..+++|+.++..+++++...        +...++|++||.....             
T Consensus        47 ~d~Vih~a~~~~~------~~~~~~~~~n~~~~~~l~~a~~~~--------~~~~~~v~~Ss~~~~~-------------   99 (369)
T 3st7_A           47 ADFIVHLAGVNRP------EHDKEFSLGNVSYLDHVLDILTRN--------TKKPAILLSSSIQATQ-------------   99 (369)
T ss_dssp             CSEEEECCCSBCT------TCSTTCSSSCCBHHHHHHHHHTTC--------SSCCEEEEEEEGGGGS-------------
T ss_pred             CCEEEECCcCCCC------CCHHHHHHHHHHHHHHHHHHHHHh--------CCCCeEEEeCchhhcC-------------
Confidence            8999999996442      234556778999988887776321        1124899999976431             


Q ss_pred             CCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccC
Q 025509          160 PSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  211 (251)
Q Consensus       160 ~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  211 (251)
                            ...|+.+|.+.+.+.+.++.+.+     +++..+.|+.+.++...+
T Consensus       100 ------~~~Y~~sK~~~E~~~~~~~~~~g-----~~~~i~R~~~v~G~~~~~  140 (369)
T 3st7_A          100 ------DNPYGESKLQGEQLLREYAEEYG-----NTVYIYRWPNLFGKWCKP  140 (369)
T ss_dssp             ------CSHHHHHHHHHHHHHHHHHHHHC-----CCEEEEEECEEECTTCCT
T ss_pred             ------CCCchHHHHHHHHHHHHHHHHhC-----CCEEEEECCceeCCCCCC
Confidence                  45899999999999999888763     667779999998886543

>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2

Probab=99.53  E-value=7.5e-14  Score=118.35  Aligned_cols=154  Identities=14%  Similarity=0.073  Sum_probs=100.5

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCch-----hHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHh
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIA-----AGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNI   75 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~-----~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~   75 (251)
                      |+||||||+|+||++++++|+++|++|++++|+..     +.+.. +.+.    ...+.++.+|++|.+++.++++    
T Consensus         5 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~-~~~~----~~~~~~~~~D~~d~~~l~~~~~----   75 (313)
T 1qyd_A            5 SRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQML-LYFK----QLGAKLIEASLDDHQRLVDALK----   75 (313)
T ss_dssp             CCEEEESTTSTTHHHHHHHHHHTTCCEEEECCSCCSSCHHHHHHH-HHHH----TTTCEEECCCSSCHHHHHHHHT----
T ss_pred             CEEEEEcCCcHHHHHHHHHHHhCCCcEEEEECCCcccchhHHHHH-HHHH----hCCeEEEeCCCCCHHHHHHHHh----
Confidence            47999999999999999999999999999999843     22221 1221    3468899999999999887765    


Q ss_pred             cCCCeeEEEEcCCCCCCCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCC-CceEEEEcCccccccccCCccc
Q 025509           76 QHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGG-EGRIINVSSEGHRLAYHEGIRF  154 (251)
Q Consensus        76 ~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~-~g~iv~vsS~~~~~~~~~~~~~  154 (251)
                         ++|+|||+++.....             .|+.++..++++    +++.     + -++||+ |+ .+...  ..   
T Consensus        76 ---~~d~vi~~a~~~~~~-------------~~~~~~~~l~~a----a~~~-----g~v~~~v~-S~-~g~~~--~~---  123 (313)
T 1qyd_A           76 ---QVDVVISALAGGVLS-------------HHILEQLKLVEA----IKEA-----GNIKRFLP-SE-FGMDP--DI---  123 (313)
T ss_dssp             ---TCSEEEECCCCSSSS-------------TTTTTHHHHHHH----HHHS-----CCCSEEEC-SC-CSSCT--TS---
T ss_pred             ---CCCEEEECCccccch-------------hhHHHHHHHHHH----HHhc-----CCCceEEe-cC-CcCCc--cc---
Confidence               589999999964321             134444444444    3432     2 457874 33 22110  00   


Q ss_pred             ccCCCCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCc
Q 025509          155 DKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNI  208 (251)
Q Consensus       155 ~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~  208 (251)
                        . .....+....| .+|.+++.+.+       ..|  +.++.+.||++.+++
T Consensus       124 --~-~~~~~p~~~~y-~sK~~~e~~~~-------~~g--~~~~ilrp~~~~~~~  164 (313)
T 1qyd_A          124 --M-EHALQPGSITF-IDKRKVRRAIE-------AAS--IPYTYVSSNMFAGYF  164 (313)
T ss_dssp             --C-CCCCSSTTHHH-HHHHHHHHHHH-------HTT--CCBCEEECCEEHHHH
T ss_pred             --c-ccCCCCCcchH-HHHHHHHHHHH-------hcC--CCeEEEEeceecccc
Confidence              0 00012334578 99999887664       235  667779999886543

>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri}

Probab=99.52  E-value=5.7e-14  Score=119.67  Aligned_cols=149  Identities=15%  Similarity=0.092  Sum_probs=97.9

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCc-h----hHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHh
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDI-A----AGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNI   75 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~-~----~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~   75 (251)
                      |+||||||+|+||++++++|+++|++|++++|+. .    ...+....+.    ...+.++.+|++|.+++.++++    
T Consensus         5 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~l~~~~----~~~v~~v~~D~~d~~~l~~a~~----   76 (321)
T 3c1o_A            5 EKIIIYGGTGYIGKFMVRASLSFSHPTFIYARPLTPDSTPSSVQLREEFR----SMGVTIIEGEMEEHEKMVSVLK----   76 (321)
T ss_dssp             CCEEEETTTSTTHHHHHHHHHHTTCCEEEEECCCCTTCCHHHHHHHHHHH----HTTCEEEECCTTCHHHHHHHHT----
T ss_pred             cEEEEEcCCchhHHHHHHHHHhCCCcEEEEECCcccccChHHHHHHHHhh----cCCcEEEEecCCCHHHHHHHHc----
Confidence            5799999999999999999999999999999986 2    1111112222    2358899999999999888775    


Q ss_pred             cCCCeeEEEEcCCCCCCCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCC-CceEEEEcCccccccccCCccc
Q 025509           76 QHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGG-EGRIINVSSEGHRLAYHEGIRF  154 (251)
Q Consensus        76 ~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~-~g~iv~vsS~~~~~~~~~~~~~  154 (251)
                         ++|+|||+++...                 +.+    .+.+++.+.+.     + -++||  .|..+....      
T Consensus        77 ---~~d~vi~~a~~~~-----------------~~~----~~~l~~aa~~~-----g~v~~~v--~S~~g~~~~------  119 (321)
T 3c1o_A           77 ---QVDIVISALPFPM-----------------ISS----QIHIINAIKAA-----GNIKRFL--PSDFGCEED------  119 (321)
T ss_dssp             ---TCSEEEECCCGGG-----------------SGG----GHHHHHHHHHH-----CCCCEEE--CSCCSSCGG------
T ss_pred             ---CCCEEEECCCccc-----------------hhh----HHHHHHHHHHh-----CCccEEe--ccccccCcc------
Confidence               5899999998521                 222    23444454443     2 35777  343321100      


Q ss_pred             ccCCCCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCC
Q 025509          155 DKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATN  207 (251)
Q Consensus       155 ~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~  207 (251)
                       +.  ....+....| .+|.+++.+.+.       .|  +.++.|.||.+.++
T Consensus       120 -~~--~~~~p~~~~y-~sK~~~e~~~~~-------~~--~~~~~lrp~~~~~~  159 (321)
T 3c1o_A          120 -RI--KPLPPFESVL-EKKRIIRRAIEA-------AA--LPYTYVSANCFGAY  159 (321)
T ss_dssp             -GC--CCCHHHHHHH-HHHHHHHHHHHH-------HT--CCBEEEECCEEHHH
T ss_pred             -cc--ccCCCcchHH-HHHHHHHHHHHH-------cC--CCeEEEEeceeccc
Confidence             00  0011224578 999998877752       24  56666899987654

>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2

Probab=99.51  E-value=1.6e-13  Score=116.03  Aligned_cols=152  Identities=15%  Similarity=0.148  Sum_probs=97.9

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhH--HHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCC
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAG--KDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHH   78 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~--~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g   78 (251)
                      |+|+||||+|+||++++++|+++|++|++++|+....  .+..+.+.+. ....+.++.+|++|.+++.++++       
T Consensus         5 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~~~~~l-~~~~v~~v~~D~~d~~~l~~~~~-------   76 (308)
T 1qyc_A            5 SRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESF-KASGANIVHGSIDDHASLVEAVK-------   76 (308)
T ss_dssp             CCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCCCTTTTHHHHHHHHHH-HTTTCEEECCCTTCHHHHHHHHH-------
T ss_pred             CEEEEEcCCcHHHHHHHHHHHhCCCCEEEEECCcccccCHHHHHHHHHH-HhCCCEEEEeccCCHHHHHHHHc-------
Confidence            4699999999999999999999999999999975321  1111111111 13468899999999999888776       


Q ss_pred             CeeEEEEcCCCCCCCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccccCC
Q 025509           79 QLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKIN  158 (251)
Q Consensus        79 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~  158 (251)
                      ++|+|||+++...                 +.++    +.+++.+++.+    ...+|| .|+ .+...          .
T Consensus        77 ~~d~vi~~a~~~~-----------------~~~~----~~l~~aa~~~g----~v~~~v-~S~-~g~~~----------~  119 (308)
T 1qyc_A           77 NVDVVISTVGSLQ-----------------IESQ----VNIIKAIKEVG----TVKRFF-PSE-FGNDV----------D  119 (308)
T ss_dssp             TCSEEEECCCGGG-----------------SGGG----HHHHHHHHHHC----CCSEEE-CSC-CSSCT----------T
T ss_pred             CCCEEEECCcchh-----------------hhhH----HHHHHHHHhcC----CCceEe-ecc-cccCc----------c
Confidence            5899999998521                 1222    33444444431    145776 343 22110          0


Q ss_pred             CCC-CCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCC
Q 025509          159 DPS-GYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATN  207 (251)
Q Consensus       159 ~~~-~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~  207 (251)
                      ... ..+....| .+|.+++.+.+.       .|  +.+..+.||++.++
T Consensus       120 ~~~~~~p~~~~y-~sK~~~e~~~~~-------~~--~~~~~~r~~~~~~~  159 (308)
T 1qyc_A          120 NVHAVEPAKSVF-EVKAKVRRAIEA-------EG--IPYTYVSSNCFAGY  159 (308)
T ss_dssp             SCCCCTTHHHHH-HHHHHHHHHHHH-------HT--CCBEEEECCEEHHH
T ss_pred             ccccCCcchhHH-HHHHHHHHHHHh-------cC--CCeEEEEeceeccc
Confidence            001 12334578 999998876653       24  66667899987654

>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*

Probab=99.50  E-value=1.1e-13  Score=117.84  Aligned_cols=148  Identities=15%  Similarity=0.083  Sum_probs=97.4

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      |+||||||+|+||++++++|+++|++|++++|+.....+..+.+.    ...+.++.+|++|.+++.++++       ++
T Consensus        12 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~l~----~~~v~~v~~Dl~d~~~l~~a~~-------~~   80 (318)
T 2r6j_A           12 SKILIFGGTGYIGNHMVKGSLKLGHPTYVFTRPNSSKTTLLDEFQ----SLGAIIVKGELDEHEKLVELMK-------KV   80 (318)
T ss_dssp             CCEEEETTTSTTHHHHHHHHHHTTCCEEEEECTTCSCHHHHHHHH----HTTCEEEECCTTCHHHHHHHHT-------TC
T ss_pred             CeEEEECCCchHHHHHHHHHHHCCCcEEEEECCCCchhhHHHHhh----cCCCEEEEecCCCHHHHHHHHc-------CC
Confidence            379999999999999999999999999999998642222222222    2358889999999999888775       58


Q ss_pred             eEEEEcCCCCCCCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCC-CceEEEEcCccccccccCCcccccCCC
Q 025509           81 NILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGG-EGRIINVSSEGHRLAYHEGIRFDKIND  159 (251)
Q Consensus        81 d~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~-~g~iv~vsS~~~~~~~~~~~~~~~~~~  159 (251)
                      |+|||+++...                 +.+    .+.+++.+++.     + .++||+ |+ .+...          ..
T Consensus        81 d~vi~~a~~~~-----------------~~~----~~~l~~aa~~~-----g~v~~~v~-S~-~g~~~----------~~  122 (318)
T 2r6j_A           81 DVVISALAFPQ-----------------ILD----QFKILEAIKVA-----GNIKRFLP-SD-FGVEE----------DR  122 (318)
T ss_dssp             SEEEECCCGGG-----------------STT----HHHHHHHHHHH-----CCCCEEEC-SC-CSSCT----------TT
T ss_pred             CEEEECCchhh-----------------hHH----HHHHHHHHHhc-----CCCCEEEe-ec-cccCc----------cc
Confidence            99999998521                 122    23444454443     2 357763 43 22110          00


Q ss_pred             CCC-CCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCC
Q 025509          160 PSG-YNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATN  207 (251)
Q Consensus       160 ~~~-~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~  207 (251)
                      ..+ .+....| .+|.+++.+.+.       .|  +.+..+.||++..+
T Consensus       123 ~~~~~p~~~~y-~sK~~~e~~~~~-------~~--~~~~~lr~~~~~~~  161 (318)
T 2r6j_A          123 INALPPFEALI-ERKRMIRRAIEE-------AN--IPYTYVSANCFASY  161 (318)
T ss_dssp             CCCCHHHHHHH-HHHHHHHHHHHH-------TT--CCBEEEECCEEHHH
T ss_pred             ccCCCCcchhH-HHHHHHHHHHHh-------cC--CCeEEEEcceehhh
Confidence            011 1224568 999998876653       35  66667899877543

>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}

Probab=99.41  E-value=2.1e-12  Score=108.91  Aligned_cols=162  Identities=17%  Similarity=0.118  Sum_probs=100.5

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      |+||||||+|.||++++++|.++|++|+++.|++..              ..+   ..|     .+.      ......+
T Consensus         1 MkILVTGatGfIG~~L~~~L~~~G~~V~~l~R~~~~--------------~~~---~~~-----~~~------~~~l~~~   52 (298)
T 4b4o_A            1 MRVLVGGGTGFIGTALTQLLNARGHEVTLVSRKPGP--------------GRI---TWD-----ELA------ASGLPSC   52 (298)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCT--------------TEE---EHH-----HHH------HHCCCSC
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCc--------------Cee---ecc-----hhh------HhhccCC
Confidence            689999999999999999999999999999997532              111   111     111      1234579


Q ss_pred             eEEEEcCCCC--CCCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccccCC
Q 025509           81 NILINNAGIM--GTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKIN  158 (251)
Q Consensus        81 d~lv~~ag~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~  158 (251)
                      |.+||.|+..  .+....+.+..+..++.|+.++..+.+++...-.       ...++|+.||.+... ...+.+   +.
T Consensus        53 d~vihla~~~i~~~~~~~~~~~~~~~~~~~v~~t~~l~~~~~~~~~-------~~~~~i~~Ss~~vyg-~~~~~~---~~  121 (298)
T 4b4o_A           53 DAAVNLAGENILNPLRRWNETFQKEVLGSRLETTQLLAKAITKAPQ-------PPKAWVLVTGVAYYQ-PSLTAE---YD  121 (298)
T ss_dssp             SEEEECCCCCSSCTTSCCCHHHHHHHHHHHHHHHHHHHHHHHHCSS-------CCSEEEEEEEGGGSC-CCSSCC---BC
T ss_pred             CEEEEeccCcccchhhhhhhhhhhhhhhHHHHHHHHHHHHHHHhCC-------CceEEEEEeeeeeec-CCCCCc---cc
Confidence            9999999842  2233345566677888998888776665433211       234567667654432 222222   22


Q ss_pred             CCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCc
Q 025509          159 DPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNI  208 (251)
Q Consensus       159 ~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~  208 (251)
                      ++.+......|+..+...+.     +......+  +++..+.||.|..+.
T Consensus       122 E~~p~~~~~~~~~~~~~~e~-----~~~~~~~~--~~~~~~r~~~v~g~~  164 (298)
T 4b4o_A          122 EDSPGGDFDFFSNLVTKWEA-----AARLPGDS--TRQVVVRSGVVLGRG  164 (298)
T ss_dssp             TTCCCSCSSHHHHHHHHHHH-----HHCCSSSS--SEEEEEEECEEECTT
T ss_pred             ccCCccccchhHHHHHHHHH-----HHHhhccC--CceeeeeeeeEEcCC
Confidence            23344444445555444332     12233445  888889999998874

>1y7t_A Malate dehydrogenase; NAD-dependent-MDH-NADPH complex, oxidoreductase; HET: NDP; 1.65A {Thermus thermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1iz9_A* 2cvq_A* 1bmd_A* 1bdm_A* 1wze_A* 1wzi_A*

Probab=99.32  E-value=3.8e-12  Score=109.11  Aligned_cols=158  Identities=13%  Similarity=0.056  Sum_probs=101.7

Q ss_pred             EEEEECCCChhHHHHHHHHHHcCC-------EEEEEecCc--hhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHH
Q 025509            2 DIVITGATSGIGTETARVLALRGV-------HVVMGVRDI--AAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASE   72 (251)
Q Consensus         2 ~vlItG~s~gIG~a~a~~l~~~G~-------~Vi~~~r~~--~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~   72 (251)
                      +|+||||+|+||.+++..|+++|+       +|+++++++  ++.......+.+.    .+.++ .|+.+.+++.+.+  
T Consensus         6 kVlVtGaaGfIG~~l~~~L~~~g~~~~~~~~ev~l~D~~~~~~~~~g~~~dl~~~----~~~~~-~di~~~~~~~~a~--   78 (327)
T 1y7t_A            6 RVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIPQAMKALEGVVMELEDC----AFPLL-AGLEATDDPKVAF--   78 (327)
T ss_dssp             EEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTT----TCTTE-EEEEEESCHHHHT--
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCCCCCCCCEEEEEeCCCchhhccchhhhhhcc----ccccc-CCeEeccChHHHh--
Confidence            699999999999999999999886       799999864  2233322333221    11122 4665544433332  


Q ss_pred             HHhcCCCeeEEEEcCCCCCCCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCc
Q 025509           73 YNIQHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGI  152 (251)
Q Consensus        73 ~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~  152 (251)
                           .+.|+|||.||.....    .++..+.+++|+.++..+++++..+- .      ...+++++|+.......   .
T Consensus        79 -----~~~D~Vih~Ag~~~~~----~~~~~~~~~~Nv~~t~~l~~a~~~~~-~------~~~~vvv~snp~~~~~~---~  139 (327)
T 1y7t_A           79 -----KDADYALLVGAAPRKA----GMERRDLLQVNGKIFTEQGRALAEVA-K------KDVKVLVVGNPANTNAL---I  139 (327)
T ss_dssp             -----TTCSEEEECCCCCCCT----TCCHHHHHHHHHHHHHHHHHHHHHHS-C------TTCEEEECSSSHHHHHH---H
T ss_pred             -----CCCCEEEECCCcCCCC----CCCHHHHHHHHHHHHHHHHHHHHhhc-C------CCeEEEEeCCchhhhHH---H
Confidence                 2689999999975432    23456789999999998888876652 0      23588888875421100   0


Q ss_pred             ccccCCCCCCCCcccccchhHHHHHHHHHHHHHHhc
Q 025509          153 RFDKINDPSGYNGFRAYSQSKLANILHANELARRLK  188 (251)
Q Consensus       153 ~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~  188 (251)
                      .+.   ...+.+....|+.+|...+.+...++..++
T Consensus       140 ~~~---~~~~~~p~~~yg~tkl~~er~~~~~a~~~g  172 (327)
T 1y7t_A          140 AYK---NAPGLNPRNFTAMTRLDHNRAKAQLAKKTG  172 (327)
T ss_dssp             HHH---TCTTSCGGGEEECCHHHHHHHHHHHHHHHT
T ss_pred             HHH---HcCCCChhheeccchHHHHHHHHHHHHHhC
Confidence            000   000234455799999998888888887664

>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*

Probab=99.30  E-value=4e-13  Score=113.14  Aligned_cols=103  Identities=18%  Similarity=0.192  Sum_probs=78.4

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      |++|||||+||||+++++.|++.|++|++++|+.+++++..+++...   ..+.++.+|+++.+++.++++       .+
T Consensus       120 k~vlVtGaaGGiG~aia~~L~~~G~~V~i~~R~~~~~~~l~~~~~~~---~~~~~~~~D~~~~~~~~~~~~-------~~  189 (287)
T 1lu9_A          120 KKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKR---FKVNVTAAETADDASRAEAVK-------GA  189 (287)
T ss_dssp             CEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHH---HTCCCEEEECCSHHHHHHHTT-------TC
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCcCEEEEEECCHHHHHHHHHHHHhc---CCcEEEEecCCCHHHHHHHHH-------hC
Confidence            57999999999999999999999999999999988888887777543   136678899999988876654       47


Q ss_pred             eEEEEcCCCCC-C--CCcCCc-hhhHHHHHHHHHHHH
Q 025509           81 NILINNAGIMG-T--PFMLSK-DNIELQFATNHLGHF  113 (251)
Q Consensus        81 d~lv~~ag~~~-~--~~~~~~-~~~~~~~~~n~~~~~  113 (251)
                      |+||||+|... +  ..+.+. ++++..+++|+.+++
T Consensus       190 DvlVn~ag~g~~~~~~~~~~~~~~~~~~~dvn~~~~~  226 (287)
T 1lu9_A          190 HFVFTAGAIGLELLPQAAWQNESSIEIVADYNAQPPL  226 (287)
T ss_dssp             SEEEECCCTTCCSBCHHHHTTCTTCCEEEECCCSSSC
T ss_pred             CEEEECCCccccCCChhHcCchHHHHHHHHhhhhhhH
Confidence            99999998532 1  112232 445556666666544

>1u7z_A Coenzyme A biosynthesis bifunctional protein coabc; ligase; HET: PMT; 2.30A {Escherichia coli} SCOP: c.72.3.1 PDB: 1u7w_A* 1u7u_A* 1u80_A*

Probab=99.08  E-value=2.7e-10  Score=91.95  Aligned_cols=87  Identities=22%  Similarity=0.300  Sum_probs=60.6

Q ss_pred             CEEEEECC----------------CChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHH
Q 025509            1 MDIVITGA----------------TSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLA   64 (251)
Q Consensus         1 k~vlItG~----------------s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~   64 (251)
                      |+||||||                |||||+++|++|+++|++|++++++.. ++         .+ ..+  -.+|+++.+
T Consensus         9 k~vlVTgG~T~E~iDpVR~itN~SSg~iG~aiA~~~~~~Ga~V~l~~~~~~-l~---------~~-~g~--~~~dv~~~~   75 (226)
T 1u7z_A            9 LNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARRGANVTLVSGPVS-LP---------TP-PFV--KRVDVMTAL   75 (226)
T ss_dssp             CEEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHHHTTCEEEEEECSCC-CC---------CC-TTE--EEEECCSHH
T ss_pred             CEEEEECCCCCcccCceeeccCCCccHHHHHHHHHHHHCCCEEEEEECCcc-cc---------cC-CCC--eEEccCcHH
Confidence            68999999                699999999999999999999988642 11         11 123  246888765


Q ss_pred             HHHHHHHHHHhcCCCeeEEEEcCCCCCC-CCcCCchhhHH
Q 025509           65 SVRNFASEYNIQHHQLNILINNAGIMGT-PFMLSKDNIEL  103 (251)
Q Consensus        65 ~i~~~~~~~~~~~g~id~lv~~ag~~~~-~~~~~~~~~~~  103 (251)
                      +   +++.+.+.++++|++|+|||+... +.+.+.+.+.+
T Consensus        76 ~---~~~~v~~~~~~~Dili~~Aav~d~~p~~~~~~KIkk  112 (226)
T 1u7z_A           76 E---MEAAVNASVQQQNIFIGCAAVADYRAATVAPEKIKK  112 (226)
T ss_dssp             H---HHHHHHHHGGGCSEEEECCBCCSEEESSCCSSCC--
T ss_pred             H---HHHHHHHhcCCCCEEEECCcccCCCCccCChHHhcc
Confidence            5   445555667899999999997531 22334444444

>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}

Probab=98.92  E-value=5.1e-09  Score=75.36  Aligned_cols=72  Identities=22%  Similarity=0.262  Sum_probs=60.1

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcC-CEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCC
Q 025509            1 MDIVITGATSGIGTETARVLALRG-VHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQ   79 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G-~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~   79 (251)
                      ++++|+|+ |++|.++++.|.+.| ++|++++|++++.+...        ...+.++.+|+++.+++.+.++       +
T Consensus         6 ~~v~I~G~-G~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~--------~~~~~~~~~d~~~~~~~~~~~~-------~   69 (118)
T 3ic5_A            6 WNICVVGA-GKIGQMIAALLKTSSNYSVTVADHDLAALAVLN--------RMGVATKQVDAKDEAGLAKALG-------G   69 (118)
T ss_dssp             EEEEEECC-SHHHHHHHHHHHHCSSEEEEEEESCHHHHHHHH--------TTTCEEEECCTTCHHHHHHHTT-------T
T ss_pred             CeEEEECC-CHHHHHHHHHHHhCCCceEEEEeCCHHHHHHHH--------hCCCcEEEecCCCHHHHHHHHc-------C
Confidence            46999999 999999999999999 89999999987765543        2356778899999888776553       6


Q ss_pred             eeEEEEcCC
Q 025509           80 LNILINNAG   88 (251)
Q Consensus        80 id~lv~~ag   88 (251)
                      +|+||++++
T Consensus        70 ~d~vi~~~~   78 (118)
T 3ic5_A           70 FDAVISAAP   78 (118)
T ss_dssp             CSEEEECSC
T ss_pred             CCEEEECCC
Confidence            899999996

>2gk4_A Conserved hypothetical protein; alpha-beta-alpha sandwich, flavoprotein, structural genomics protein structure initiative; 1.83A {Streptococcus pneumoniae}

Probab=98.88  E-value=6.4e-09  Score=84.09  Aligned_cols=76  Identities=18%  Similarity=0.293  Sum_probs=55.2

Q ss_pred             CEEEEECC----------------CChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHH
Q 025509            1 MDIVITGA----------------TSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLA   64 (251)
Q Consensus         1 k~vlItG~----------------s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~   64 (251)
                      |+||||||                ||++|.++|++|+++|++|++++|+... ..       .. ...+.+  .|+.+  
T Consensus         4 k~vlVTgG~T~E~IDpVR~ItN~SSG~mG~aiA~~~~~~Ga~V~lv~~~~~~-~~-------~~-~~~~~~--~~v~s--   70 (232)
T 2gk4_A            4 MKILVTSGGTSEAIDSVRSITNHSTGHLGKIITETLLSAGYEVCLITTKRAL-KP-------EP-HPNLSI--REITN--   70 (232)
T ss_dssp             CEEEEECSBCEEESSSSEEEEECCCCHHHHHHHHHHHHTTCEEEEEECTTSC-CC-------CC-CTTEEE--EECCS--
T ss_pred             CEEEEeCCCcccccCceeeccCCCCCHHHHHHHHHHHHCCCEEEEEeCCccc-cc-------cC-CCCeEE--EEHhH--
Confidence            68999999                7889999999999999999999997532 00       00 123333  35544  


Q ss_pred             HHHHHHHHHHhcCCCeeEEEEcCCCC
Q 025509           65 SVRNFASEYNIQHHQLNILINNAGIM   90 (251)
Q Consensus        65 ~i~~~~~~~~~~~g~id~lv~~ag~~   90 (251)
                       .+++++.+.+.++++|++|+||++.
T Consensus        71 -~~em~~~v~~~~~~~Dili~aAAvs   95 (232)
T 2gk4_A           71 -TKDLLIEMQERVQDYQVLIHSMAVS   95 (232)
T ss_dssp             -HHHHHHHHHHHGGGCSEEEECSBCC
T ss_pred             -HHHHHHHHHHhcCCCCEEEEcCccc
Confidence             4445555555667899999999974

>4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes}

Probab=98.87  E-value=1.6e-08  Score=89.04  Aligned_cols=82  Identities=20%  Similarity=0.347  Sum_probs=70.9

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcC---CEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcC
Q 025509            1 MDIVITGATSGIGTETARVLALRG---VHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQH   77 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G---~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~   77 (251)
                      ++|+|+|+ ||||+++++.|++.|   .+|++++|+.++++++.+++.... +..+..+.+|+++.+++++++++.    
T Consensus         2 ~kVlIiGa-GgiG~~ia~~L~~~g~~~~~V~v~~r~~~~~~~la~~l~~~~-~~~~~~~~~D~~d~~~l~~~l~~~----   75 (405)
T 4ina_A            2 AKVLQIGA-GGVGGVVAHKMAMNREVFSHITLASRTLSKCQEIAQSIKAKG-YGEIDITTVDADSIEELVALINEV----   75 (405)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHTCTTTCCEEEEEESCHHHHHHHHHHHHHTT-CCCCEEEECCTTCHHHHHHHHHHH----
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCceEEEEEECCHHHHHHHHHHhhhhc-CCceEEEEecCCCHHHHHHHHHhh----
Confidence            57999999 899999999999998   389999999999988888775432 246888999999999999998875    


Q ss_pred             CCeeEEEEcCCC
Q 025509           78 HQLNILINNAGI   89 (251)
Q Consensus        78 g~id~lv~~ag~   89 (251)
                       ++|+||||++.
T Consensus        76 -~~DvVin~ag~   86 (405)
T 4ina_A           76 -KPQIVLNIALP   86 (405)
T ss_dssp             -CCSEEEECSCG
T ss_pred             -CCCEEEECCCc
Confidence             68999999984

>3gxh_A Putative phosphatase (DUF442); YP_001181608.1, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.40A {Shewanella putrefaciens cn-32} PDB: 3gxg_A*

Probab=98.80  E-value=4.7e-09  Score=80.28  Aligned_cols=77  Identities=13%  Similarity=0.176  Sum_probs=62.2

Q ss_pred             ChhHHHHHHHHHHcCCEEEEEecCchhHH---HHHHHHHhhCCCCceEEEEecCCCH--HHHHHHHHHHHhcCCCeeEEE
Q 025509           10 SGIGTETARVLALRGVHVVMGVRDIAAGK---DVKETIVKEIPSAKVDAMELDLSSL--ASVRNFASEYNIQHHQLNILI   84 (251)
Q Consensus        10 ~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~---~~~~~~~~~~~~~~v~~~~~D~~~~--~~i~~~~~~~~~~~g~id~lv   84 (251)
                      +-++.+.++.|++.|++|++..|+.....   +..+.+.+.  +.....+++|++++  ++++++++.+.+.+|+ |+||
T Consensus        26 ~~p~~a~a~~La~~Ga~vvi~~r~~~e~~~~~~~~~~~~~~--G~~~~~i~~Dv~~~~~~~v~~~~~~i~~~~G~-dVLV  102 (157)
T 3gxh_A           26 GLPNEQQFSLLKQAGVDVVINLMPDSSKDAHPDEGKLVTQA--GMDYVYIPVDWQNPKVEDVEAFFAAMDQHKGK-DVLV  102 (157)
T ss_dssp             BCCCHHHHHHHHHTTCCEEEECSCTTSTTSCTTHHHHHHHT--TCEEEECCCCTTSCCHHHHHHHHHHHHHTTTS-CEEE
T ss_pred             CCCCHHHHHHHHHcCCCEEEECCCcccccccccHHHHHHHc--CCeEEEecCCCCCCCHHHHHHHHHHHHhcCCC-CEEE
Confidence            45789999999999999999988754432   123334333  56788889999999  9999999999988899 9999


Q ss_pred             EcCCC
Q 025509           85 NNAGI   89 (251)
Q Consensus        85 ~~ag~   89 (251)
                      ||||+
T Consensus       103 nnAgg  107 (157)
T 3gxh_A          103 HCLAN  107 (157)
T ss_dssp             ECSBS
T ss_pred             ECCCC
Confidence            99996

>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*

Probab=98.66  E-value=7e-08  Score=82.49  Aligned_cols=77  Identities=13%  Similarity=0.243  Sum_probs=58.7

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      +++|||||++|||.++++.+...|++|+++++++++.+.+ +++     +..   ..+|.++.+++.+.+.++..  +++
T Consensus       147 ~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~-~~~-----g~~---~~~d~~~~~~~~~~~~~~~~--~~~  215 (333)
T 1v3u_A          147 ETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKIAYL-KQI-----GFD---AAFNYKTVNSLEEALKKASP--DGY  215 (333)
T ss_dssp             CEEEEESTTBHHHHHHHHHHHHTTCEEEEEESSHHHHHHH-HHT-----TCS---EEEETTSCSCHHHHHHHHCT--TCE
T ss_pred             CEEEEecCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-Hhc-----CCc---EEEecCCHHHHHHHHHHHhC--CCC
Confidence            4799999999999999999999999999999987766554 322     322   23577764555555555543  589


Q ss_pred             eEEEEcCC
Q 025509           81 NILINNAG   88 (251)
Q Consensus        81 d~lv~~ag   88 (251)
                      |++|+|+|
T Consensus       216 d~vi~~~g  223 (333)
T 1v3u_A          216 DCYFDNVG  223 (333)
T ss_dssp             EEEEESSC
T ss_pred             eEEEECCC
Confidence            99999998

>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1

Probab=98.61  E-value=1.1e-07  Score=75.01  Aligned_cols=77  Identities=13%  Similarity=0.209  Sum_probs=55.2

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      ++||||||++|||.++++.+...|++|++++|++++.+.+.    + . +..   ..+|.++.+..+.+.+...  .+++
T Consensus        40 ~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~~----~-~-g~~---~~~d~~~~~~~~~~~~~~~--~~~~  108 (198)
T 1pqw_A           40 ERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAKREMLS----R-L-GVE---YVGDSRSVDFADEILELTD--GYGV  108 (198)
T ss_dssp             CEEEETTTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHH----T-T-CCS---EEEETTCSTHHHHHHHHTT--TCCE
T ss_pred             CEEEEeeCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH----H-c-CCC---EEeeCCcHHHHHHHHHHhC--CCCC
Confidence            47999999999999999999999999999999876654332    1 1 322   2247776554444433321  2369


Q ss_pred             eEEEEcCC
Q 025509           81 NILINNAG   88 (251)
Q Consensus        81 d~lv~~ag   88 (251)
                      |++|+|+|
T Consensus       109 D~vi~~~g  116 (198)
T 1pqw_A          109 DVVLNSLA  116 (198)
T ss_dssp             EEEEECCC
T ss_pred             eEEEECCc
Confidence            99999997

>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A

Probab=98.56  E-value=1.2e-07  Score=84.55  Aligned_cols=75  Identities=16%  Similarity=0.290  Sum_probs=60.1

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      |+|+|+| +|++|+++++.|++.|++|++++|+.++++++.+    ..  ..+..+.+|+++.+++.++++       ++
T Consensus         4 k~VlViG-aG~iG~~ia~~L~~~G~~V~v~~R~~~~a~~la~----~~--~~~~~~~~Dv~d~~~l~~~l~-------~~   69 (450)
T 1ff9_A            4 KSVLMLG-SGFVTRPTLDVLTDSGIKVTVACRTLESAKKLSA----GV--QHSTPISLDVNDDAALDAEVA-------KH   69 (450)
T ss_dssp             CEEEEEC-CSTTHHHHHHHHHTTTCEEEEEESSHHHHHHTTT----TC--TTEEEEECCTTCHHHHHHHHT-------TS
T ss_pred             CEEEEEC-CCHHHHHHHHHHHhCcCEEEEEECCHHHHHHHHH----hc--CCceEEEeecCCHHHHHHHHc-------CC
Confidence            5799997 7999999999999999999999998766554332    21  236788899999888877653       68


Q ss_pred             eEEEEcCCC
Q 025509           81 NILINNAGI   89 (251)
Q Consensus        81 d~lv~~ag~   89 (251)
                      |+||||++.
T Consensus        70 DvVIn~a~~   78 (450)
T 1ff9_A           70 DLVISLIPY   78 (450)
T ss_dssp             SEEEECCC-
T ss_pred             cEEEECCcc
Confidence            999999985

>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}

Probab=98.49  E-value=1.9e-07  Score=81.07  Aligned_cols=104  Identities=18%  Similarity=0.247  Sum_probs=69.1

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      ++|+|+|+ |+||.++++.+...|++|++++|++++++.+.+.+     +..   +.+|.++.+++.+.+.       ..
T Consensus       167 ~~V~ViGa-G~iG~~~a~~l~~~Ga~V~~~d~~~~~~~~~~~~~-----g~~---~~~~~~~~~~l~~~~~-------~~  230 (369)
T 2eez_A          167 ASVVILGG-GTVGTNAAKIALGMGAQVTILDVNHKRLQYLDDVF-----GGR---VITLTATEANIKKSVQ-------HA  230 (369)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHT-----TTS---EEEEECCHHHHHHHHH-------HC
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHhc-----Cce---EEEecCCHHHHHHHHh-------CC
Confidence            57999999 99999999999999999999999987766554322     232   4567778777776553       68


Q ss_pred             eEEEEcCCCCCCCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccc
Q 025509           81 NILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGH  144 (251)
Q Consensus        81 d~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~  144 (251)
                      |++|+|++.....   +              +..+.+..++.|+       ++++||++++..+
T Consensus       231 DvVi~~~g~~~~~---~--------------~~li~~~~l~~mk-------~gg~iV~v~~~~g  270 (369)
T 2eez_A          231 DLLIGAVLVPGAK---A--------------PKLVTRDMLSLMK-------EGAVIVDVAVDQG  270 (369)
T ss_dssp             SEEEECCC------------------------CCSCHHHHTTSC-------TTCEEEECC----
T ss_pred             CEEEECCCCCccc---c--------------chhHHHHHHHhhc-------CCCEEEEEecCCC
Confidence            9999999863210   0              0112334444443       3689999998653

>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5

Probab=98.47  E-value=1.1e-07  Score=79.74  Aligned_cols=77  Identities=23%  Similarity=0.368  Sum_probs=57.0

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      |+++|||++ |+|+++|..|++.| +|++++|+.++++++.+++....... . .+.+|+++.          .+..+++
T Consensus       129 k~vlV~GaG-giG~aia~~L~~~G-~V~v~~r~~~~~~~l~~~~~~~~~~~-~-~~~~d~~~~----------~~~~~~~  194 (287)
T 1nvt_A          129 KNIVIYGAG-GAARAVAFELAKDN-NIIIANRTVEKAEALAKEIAEKLNKK-F-GEEVKFSGL----------DVDLDGV  194 (287)
T ss_dssp             CEEEEECCS-HHHHHHHHHHTSSS-EEEEECSSHHHHHHHHHHHHHHHTCC-H-HHHEEEECT----------TCCCTTC
T ss_pred             CEEEEECch-HHHHHHHHHHHHCC-CEEEEECCHHHHHHHHHHHhhhcccc-c-ceeEEEeeH----------HHhhCCC
Confidence            579999997 99999999999999 99999999888888877764421001 0 122344431          3456789


Q ss_pred             eEEEEcCCCCC
Q 025509           81 NILINNAGIMG   91 (251)
Q Consensus        81 d~lv~~ag~~~   91 (251)
                      |+||+|+|...
T Consensus       195 DilVn~ag~~~  205 (287)
T 1nvt_A          195 DIIINATPIGM  205 (287)
T ss_dssp             CEEEECSCTTC
T ss_pred             CEEEECCCCCC
Confidence            99999999643

>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}

Probab=98.47  E-value=5.7e-07  Score=77.30  Aligned_cols=77  Identities=14%  Similarity=0.110  Sum_probs=58.7

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      ++|||+|+++|||.++++.+...|++|++++|++++.+.+. ++     +..   ..+|+++.+++.+.+.++...  ++
T Consensus       171 ~~vlV~Ga~ggiG~~~~~~a~~~Ga~V~~~~~~~~~~~~~~-~~-----g~~---~~~d~~~~~~~~~~~~~~~~~--~~  239 (347)
T 2hcy_A          171 HWVAISGAAGGLGSLAVQYAKAMGYRVLGIDGGEGKEELFR-SI-----GGE---VFIDFTKEKDIVGAVLKATDG--GA  239 (347)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSTTHHHHHH-HT-----TCC---EEEETTTCSCHHHHHHHHHTS--CE
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCCcEEEEcCCHHHHHHHH-Hc-----CCc---eEEecCccHhHHHHHHHHhCC--CC
Confidence            47999999999999999999999999999999887764332 22     332   234877656666666665443  79


Q ss_pred             eEEEEcCC
Q 025509           81 NILINNAG   88 (251)
Q Consensus        81 d~lv~~ag   88 (251)
                      |++|+|+|
T Consensus       240 D~vi~~~g  247 (347)
T 2hcy_A          240 HGVINVSV  247 (347)
T ss_dssp             EEEEECSS
T ss_pred             CEEEECCC
Confidence            99999998

>2o7s_A DHQ-SDH PR, bifunctional 3-dehydroquinate dehydratase/shikima dehydrogenase; shikimate, NADPH, dehydroshikimate, bifunctional enzyme; HET: DHK TLA NAP; 1.78A {Arabidopsis thaliana} PDB: 2o7q_A* 2gpt_A*

Probab=98.46  E-value=5e-08  Score=88.56  Aligned_cols=92  Identities=20%  Similarity=0.201  Sum_probs=63.1

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHh-cCCC
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNI-QHHQ   79 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~-~~g~   79 (251)
                      |+++|||| ||+|++++..|++.|++|++++|+.++++++.+++     +..+.    ++.+   +       .. ..+.
T Consensus       365 k~vlV~Ga-GGig~aia~~L~~~G~~V~i~~R~~~~a~~la~~~-----~~~~~----~~~d---l-------~~~~~~~  424 (523)
T 2o7s_A          365 KTVVVIGA-GGAGKALAYGAKEKGAKVVIANRTYERALELAEAI-----GGKAL----SLTD---L-------DNYHPED  424 (523)
T ss_dssp             -CEEEECC-SHHHHHHHHHHHHHCC-CEEEESSHHHHHHHHHHT-----TC-CE----ETTT---T-------TTC--CC
T ss_pred             CEEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHc-----CCcee----eHHH---h-------hhccccC
Confidence            46899999 59999999999999999999999988877766544     22221    2222   1       11 1135


Q ss_pred             eeEEEEcCCCCC-------CCCcCCchhhHHHHHHHHHHH
Q 025509           80 LNILINNAGIMG-------TPFMLSKDNIELQFATNHLGH  112 (251)
Q Consensus        80 id~lv~~ag~~~-------~~~~~~~~~~~~~~~~n~~~~  112 (251)
                      +|+||||+|+..       +..+.+.+++..++++|+.+.
T Consensus       425 ~DilVN~agvg~~~~~~~~~~~~~~~~~~~~v~Dvny~p~  464 (523)
T 2o7s_A          425 GMVLANTTSMGMQPNVEETPISKDALKHYALVFDAVYTPR  464 (523)
T ss_dssp             SEEEEECSSTTCTTCTTCCSSCTTTGGGEEEEEECCCSSS
T ss_pred             ceEEEECCCCCCCCCCCCCCCChHHcCcCcEEEEEeeCCc
Confidence            899999999642       223345567778889988765

>1b8p_A Protein (malate dehydrogenase); oxidoreductase; 1.90A {Aquaspirillum arcticum} SCOP: c.2.1.5 d.162.1.1 PDB: 1b8u_A* 1b8v_A* 3d5t_A

Probab=98.44  E-value=1.2e-06  Score=74.85  Aligned_cols=158  Identities=10%  Similarity=-0.021  Sum_probs=97.0

Q ss_pred             EEEEECCCChhHHHHHHHHHHcCC-------EEEEEecC----chhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHH
Q 025509            2 DIVITGATSGIGTETARVLALRGV-------HVVMGVRD----IAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFA   70 (251)
Q Consensus         2 ~vlItG~s~gIG~a~a~~l~~~G~-------~Vi~~~r~----~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~   70 (251)
                      +|+||||+|++|.+++..|+..|.       .|++++++    +++++.....+.+...  .+.   .|+...++..+. 
T Consensus         7 KI~ViGaaG~VG~~l~~~L~~~~~~~~~~~~ev~l~Di~~~~~~~~~~g~~~dl~~~~~--~~~---~~i~~~~~~~~a-   80 (329)
T 1b8p_A            7 RVAVTGAAGQICYSLLFRIANGDMLGKDQPVILQLLEIPNEKAQKALQGVMMEIDDCAF--PLL---AGMTAHADPMTA-   80 (329)
T ss_dssp             EEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCSCHHHHHHHHHHHHHHHTTTC--TTE---EEEEEESSHHHH-
T ss_pred             EEEEECCCChHHHHHHHHHHhCCCcCCCCCCEEEEEcCCCccccccchhhHHHHhhhcc--ccc---CcEEEecCcHHH-
Confidence            699999999999999999999885       79999998    5555555555554210  111   233322222222 


Q ss_pred             HHHHhcCCCeeEEEEcCCCCCCCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccC
Q 025509           71 SEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHE  150 (251)
Q Consensus        71 ~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~  150 (251)
                            +...|+||+.||......    ..-.+.+..|+.....+++.+..+.       ++.++|+++|..........
T Consensus        81 ------l~~aD~Vi~~ag~~~~~g----~~r~dl~~~N~~i~~~i~~~i~~~~-------~p~a~ii~~SNPv~~~t~~~  143 (329)
T 1b8p_A           81 ------FKDADVALLVGARPRGPG----MERKDLLEANAQIFTVQGKAIDAVA-------SRNIKVLVVGNPANTNAYIA  143 (329)
T ss_dssp             ------TTTCSEEEECCCCCCCTT----CCHHHHHHHHHHHHHHHHHHHHHHS-------CTTCEEEECSSSHHHHHHHH
T ss_pred             ------hCCCCEEEEeCCCCCCCC----CCHHHHHHHHHHHHHHHHHHHHHhc-------CCCeEEEEccCchHHHHHHH
Confidence                  237899999999754321    1234567888887777666665542       03568999987443221100


Q ss_pred             CcccccCCCCC-CCCcccccchhHHHHHHHHHHHHHHhcc
Q 025509          151 GIRFDKINDPS-GYNGFRAYSQSKLANILHANELARRLKE  189 (251)
Q Consensus       151 ~~~~~~~~~~~-~~~~~~~Y~~sK~a~~~~~~~la~e~~~  189 (251)
                             .... ++|....|+.++.--..+...++..++-
T Consensus       144 -------~~~~~~~p~~~v~g~t~Ld~~r~~~~la~~lgv  176 (329)
T 1b8p_A          144 -------MKSAPSLPAKNFTAMLRLDHNRALSQIAAKTGK  176 (329)
T ss_dssp             -------HHTCTTSCGGGEEECCHHHHHHHHHHHHHHHTC
T ss_pred             -------HHHcCCCCHHHEEEeecHHHHHHHHHHHHHhCc
Confidence                   0001 2334445888876556667777777753

>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*

Probab=98.43  E-value=3.8e-07  Score=78.21  Aligned_cols=78  Identities=12%  Similarity=0.161  Sum_probs=57.3

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      ++|||+||+||||.++++.+...|++|+++++++++++.+.+++     +...   .+|.++.+++.+.+.++..  +++
T Consensus       157 ~~vlI~Ga~g~iG~~~~~~a~~~G~~V~~~~~~~~~~~~~~~~~-----g~~~---~~d~~~~~~~~~~~~~~~~--~~~  226 (345)
T 2j3h_A          157 ETVYVSAASGAVGQLVGQLAKMMGCYVVGSAGSKEKVDLLKTKF-----GFDD---AFNYKEESDLTAALKRCFP--NGI  226 (345)
T ss_dssp             CEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTS-----CCSE---EEETTSCSCSHHHHHHHCT--TCE
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc-----CCce---EEecCCHHHHHHHHHHHhC--CCC
Confidence            47999999999999999999999999999999887765543222     3322   2366654445555555432  479


Q ss_pred             eEEEEcCC
Q 025509           81 NILINNAG   88 (251)
Q Consensus        81 d~lv~~ag   88 (251)
                      |++|+|+|
T Consensus       227 d~vi~~~g  234 (345)
T 2j3h_A          227 DIYFENVG  234 (345)
T ss_dssp             EEEEESSC
T ss_pred             cEEEECCC
Confidence            99999998

>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}

Probab=98.41  E-value=1.6e-06  Score=64.50  Aligned_cols=73  Identities=14%  Similarity=0.193  Sum_probs=58.1

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      ++++|+|+ |.+|.++++.|.+.|++|++++++++..+...+        ..+.++..|.++++.+.++      ...+.
T Consensus         7 ~~v~I~G~-G~iG~~la~~L~~~g~~V~~id~~~~~~~~~~~--------~~~~~~~gd~~~~~~l~~~------~~~~~   71 (141)
T 3llv_A            7 YEYIVIGS-EAAGVGLVRELTAAGKKVLAVDKSKEKIELLED--------EGFDAVIADPTDESFYRSL------DLEGV   71 (141)
T ss_dssp             CSEEEECC-SHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHH--------TTCEEEECCTTCHHHHHHS------CCTTC
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHH--------CCCcEEECCCCCHHHHHhC------CcccC
Confidence            36899998 779999999999999999999999877665543        2367788999998876643      22478


Q ss_pred             eEEEEcCC
Q 025509           81 NILINNAG   88 (251)
Q Consensus        81 d~lv~~ag   88 (251)
                      |++|.+.+
T Consensus        72 d~vi~~~~   79 (141)
T 3llv_A           72 SAVLITGS   79 (141)
T ss_dssp             SEEEECCS
T ss_pred             CEEEEecC
Confidence            99998876

>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1

Probab=98.40  E-value=9.7e-07  Score=75.15  Aligned_cols=77  Identities=10%  Similarity=0.164  Sum_probs=56.3

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      ++||||||++|||.++++.+...|++|+++++++++.+.+.+ +     +...   .+|.++.+..+.+.+...  ..++
T Consensus       142 ~~vlV~Ga~ggiG~~~~~~a~~~G~~V~~~~~~~~~~~~~~~-~-----g~~~---~~~~~~~~~~~~~~~~~~--~~~~  210 (327)
T 1qor_A          142 EQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQSALK-A-----GAWQ---VINYREEDLVERLKEITG--GKKV  210 (327)
T ss_dssp             CEEEESSTTBHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHH-H-----TCSE---EEETTTSCHHHHHHHHTT--TCCE
T ss_pred             CEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH-c-----CCCE---EEECCCccHHHHHHHHhC--CCCc
Confidence            479999999999999999999999999999998777655433 2     3322   246766554444443321  2369


Q ss_pred             eEEEEcCC
Q 025509           81 NILINNAG   88 (251)
Q Consensus        81 d~lv~~ag   88 (251)
                      |++|+|+|
T Consensus       211 D~vi~~~g  218 (327)
T 1qor_A          211 RVVYDSVG  218 (327)
T ss_dssp             EEEEECSC
T ss_pred             eEEEECCc
Confidence            99999998

>2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae}

Probab=98.40  E-value=7.4e-07  Score=79.63  Aligned_cols=74  Identities=14%  Similarity=0.285  Sum_probs=60.2

Q ss_pred             CEEEEECCCChhHHHHHHHHHHc-CCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCC
Q 025509            1 MDIVITGATSGIGTETARVLALR-GVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQ   79 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~-G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~   79 (251)
                      |+|+|+|+ ||+|++++..|++. |++|++++|+.++++++.+.       ..+.++.+|+.+.+++.++++       +
T Consensus        24 k~VlIiGA-GgiG~aia~~L~~~~g~~V~v~~R~~~ka~~la~~-------~~~~~~~~D~~d~~~l~~~l~-------~   88 (467)
T 2axq_A           24 KNVLLLGS-GFVAQPVIDTLAANDDINVTVACRTLANAQALAKP-------SGSKAISLDVTDDSALDKVLA-------D   88 (467)
T ss_dssp             EEEEEECC-STTHHHHHHHHHTSTTEEEEEEESSHHHHHHHHGG-------GTCEEEECCTTCHHHHHHHHH-------T
T ss_pred             CEEEEECC-hHHHHHHHHHHHhCCCCeEEEEECCHHHHHHHHHh-------cCCcEEEEecCCHHHHHHHHc-------C
Confidence            46999997 99999999999998 78999999998776655432       135667899999888777654       6


Q ss_pred             eeEEEEcCCC
Q 025509           80 LNILINNAGI   89 (251)
Q Consensus        80 id~lv~~ag~   89 (251)
                      +|+|||+++.
T Consensus        89 ~DvVIn~tp~   98 (467)
T 2axq_A           89 NDVVISLIPY   98 (467)
T ss_dssp             SSEEEECSCG
T ss_pred             CCEEEECCch
Confidence            8999999985

>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*

Probab=98.38  E-value=3.4e-06  Score=71.46  Aligned_cols=78  Identities=24%  Similarity=0.316  Sum_probs=60.7

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCC-EEEEEecC---chhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhc
Q 025509            1 MDIVITGATSGIGTETARVLALRGV-HVVMGVRD---IAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQ   76 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~-~Vi~~~r~---~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~   76 (251)
                      |++||+|+ ||+|++++..|++.|+ +|+++.|+   .++++++.+++.+.. +  +.+...++.+.+++.+.+.     
T Consensus       155 k~~lVlGa-GG~g~aia~~L~~~Ga~~V~i~nR~~~~~~~a~~la~~~~~~~-~--~~~~~~~~~~~~~l~~~l~-----  225 (315)
T 3tnl_A          155 KKMTICGA-GGAATAICIQAALDGVKEISIFNRKDDFYANAEKTVEKINSKT-D--CKAQLFDIEDHEQLRKEIA-----  225 (315)
T ss_dssp             SEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHHS-S--CEEEEEETTCHHHHHHHHH-----
T ss_pred             CEEEEECC-ChHHHHHHHHHHHCCCCEEEEEECCCchHHHHHHHHHHhhhhc-C--CceEEeccchHHHHHhhhc-----
Confidence            57999997 7999999999999999 89999999   888888888876654 2  3334456766666554333     


Q ss_pred             CCCeeEEEEcCCC
Q 025509           77 HHQLNILINNAGI   89 (251)
Q Consensus        77 ~g~id~lv~~ag~   89 (251)
                        ..|+||++.+.
T Consensus       226 --~aDiIINaTp~  236 (315)
T 3tnl_A          226 --ESVIFTNATGV  236 (315)
T ss_dssp             --TCSEEEECSST
T ss_pred             --CCCEEEECccC
Confidence              68999999875

>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}

Probab=98.38  E-value=1.4e-06  Score=74.45  Aligned_cols=78  Identities=12%  Similarity=0.162  Sum_probs=56.7

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      ++|||+||+||||.++++.+...|++|++++|++++.+.+.+ +     +..   ..+|.++.+..+.+.+...  ..++
T Consensus       147 ~~vlV~Ga~ggiG~~~~~~a~~~G~~Vi~~~~~~~~~~~~~~-~-----g~~---~~~d~~~~~~~~~i~~~~~--~~~~  215 (333)
T 1wly_A          147 DYVLIHAAAGGMGHIMVPWARHLGATVIGTVSTEEKAETARK-L-----GCH---HTINYSTQDFAEVVREITG--GKGV  215 (333)
T ss_dssp             CEEEETTTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHHHHH-H-----TCS---EEEETTTSCHHHHHHHHHT--TCCE
T ss_pred             CEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-c-----CCC---EEEECCCHHHHHHHHHHhC--CCCC
Confidence            479999999999999999999999999999999776655432 2     332   2247766544444443322  2369


Q ss_pred             eEEEEcCCC
Q 025509           81 NILINNAGI   89 (251)
Q Consensus        81 d~lv~~ag~   89 (251)
                      |++|+|+|.
T Consensus       216 d~vi~~~g~  224 (333)
T 1wly_A          216 DVVYDSIGK  224 (333)
T ss_dssp             EEEEECSCT
T ss_pred             eEEEECCcH
Confidence            999999983

>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*

Probab=98.38  E-value=7.8e-07  Score=76.70  Aligned_cols=77  Identities=14%  Similarity=0.170  Sum_probs=55.2

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCC-EEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCC
Q 025509            1 MDIVITGATSGIGTETARVLALRGV-HVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQ   79 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~   79 (251)
                      ++|||+||+||||.++++.+...|+ +|+++++++++.+.+.+++     +..   ..+|.++.+ +.+.+.++..  ++
T Consensus       162 ~~vlI~GasggiG~~~~~~a~~~Ga~~Vi~~~~~~~~~~~~~~~~-----g~~---~~~d~~~~~-~~~~~~~~~~--~~  230 (357)
T 2zb4_A          162 KTMVVSGAAGACGSVAGQIGHFLGCSRVVGICGTHEKCILLTSEL-----GFD---AAINYKKDN-VAEQLRESCP--AG  230 (357)
T ss_dssp             CEEEESSTTBHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTS-----CCS---EEEETTTSC-HHHHHHHHCT--TC
T ss_pred             cEEEEECCCcHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHc-----CCc---eEEecCchH-HHHHHHHhcC--CC
Confidence            4799999999999999999999999 9999999876665544322     332   235776533 3333333322  27


Q ss_pred             eeEEEEcCC
Q 025509           80 LNILINNAG   88 (251)
Q Consensus        80 id~lv~~ag   88 (251)
                      +|++|+|+|
T Consensus       231 ~d~vi~~~G  239 (357)
T 2zb4_A          231 VDVYFDNVG  239 (357)
T ss_dssp             EEEEEESCC
T ss_pred             CCEEEECCC
Confidence            999999998

>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*

Probab=98.33  E-value=1.8e-06  Score=74.35  Aligned_cols=78  Identities=13%  Similarity=0.127  Sum_probs=56.2

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      ++|||+||+||||.++++.+...|++|+++++++++.+.+ +++     +..   ..+|.++.+..+.+.+.. . .+++
T Consensus       164 ~~vlV~Ga~ggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~-~~~-----g~~---~~~~~~~~~~~~~~~~~~-~-~~~~  232 (354)
T 2j8z_A          164 DYVLIHAGLSGVGTAAIQLTRMAGAIPLVTAGSQKKLQMA-EKL-----GAA---AGFNYKKEDFSEATLKFT-K-GAGV  232 (354)
T ss_dssp             CEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH-HHH-----TCS---EEEETTTSCHHHHHHHHT-T-TSCE
T ss_pred             CEEEEECCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HHc-----CCc---EEEecCChHHHHHHHHHh-c-CCCc
Confidence            4799999999999999999999999999999998776655 333     332   234666544444333322 1 2369


Q ss_pred             eEEEEcCCC
Q 025509           81 NILINNAGI   89 (251)
Q Consensus        81 d~lv~~ag~   89 (251)
                      |++|+|+|.
T Consensus       233 d~vi~~~G~  241 (354)
T 2j8z_A          233 NLILDCIGG  241 (354)
T ss_dssp             EEEEESSCG
T ss_pred             eEEEECCCc
Confidence            999999983

>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*

Probab=98.33  E-value=1.5e-06  Score=74.25  Aligned_cols=77  Identities=17%  Similarity=0.272  Sum_probs=55.6

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      ++|||+|++||||.++++.+...|++|+++++++++.+.+.+++     +..   ...|.++.+..+. +.++.  .+++
T Consensus       151 ~~vlI~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~~-----g~~---~~~~~~~~~~~~~-~~~~~--~~~~  219 (336)
T 4b7c_A          151 ETVVISGAAGAVGSVAGQIARLKGCRVVGIAGGAEKCRFLVEEL-----GFD---GAIDYKNEDLAAG-LKREC--PKGI  219 (336)
T ss_dssp             CEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTT-----CCS---EEEETTTSCHHHH-HHHHC--TTCE
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc-----CCC---EEEECCCHHHHHH-HHHhc--CCCc
Confidence            47999999999999999999999999999999987766553332     332   1246665443333 33332  2479


Q ss_pred             eEEEEcCC
Q 025509           81 NILINNAG   88 (251)
Q Consensus        81 d~lv~~ag   88 (251)
                      |++|+|+|
T Consensus       220 d~vi~~~g  227 (336)
T 4b7c_A          220 DVFFDNVG  227 (336)
T ss_dssp             EEEEESSC
T ss_pred             eEEEECCC
Confidence            99999998

>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1

Probab=98.29  E-value=2.8e-06  Score=73.12  Aligned_cols=77  Identities=13%  Similarity=0.219  Sum_probs=55.3

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      ++|||+||+||||.++++.+...|++|+++++++++.+.+ +++     +..   ..+|.++.+..+.+.+..  ...++
T Consensus       172 ~~vlV~GasggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~-~~~-----ga~---~~~d~~~~~~~~~~~~~~--~~~~~  240 (351)
T 1yb5_A          172 ESVLVHGASGGVGLAACQIARAYGLKILGTAGTEEGQKIV-LQN-----GAH---EVFNHREVNYIDKIKKYV--GEKGI  240 (351)
T ss_dssp             CEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHH-HHT-----TCS---EEEETTSTTHHHHHHHHH--CTTCE
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChhHHHHH-HHc-----CCC---EEEeCCCchHHHHHHHHc--CCCCc
Confidence            4799999999999999999999999999999988766533 222     332   224666654444433322  12379


Q ss_pred             eEEEEcCC
Q 025509           81 NILINNAG   88 (251)
Q Consensus        81 d~lv~~ag   88 (251)
                      |++|+|+|
T Consensus       241 D~vi~~~G  248 (351)
T 1yb5_A          241 DIIIEMLA  248 (351)
T ss_dssp             EEEEESCH
T ss_pred             EEEEECCC
Confidence            99999998

>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*

Probab=98.28  E-value=1.2e-06  Score=65.00  Aligned_cols=74  Identities=12%  Similarity=0.096  Sum_probs=55.3

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      ++++|+|+ |++|..+++.|.+.|++|++++++++..+...        .....++..|.++.+.+.+.      ...+.
T Consensus         7 ~~v~I~G~-G~iG~~~a~~l~~~g~~v~~~d~~~~~~~~~~--------~~~~~~~~~d~~~~~~l~~~------~~~~~   71 (144)
T 2hmt_A            7 KQFAVIGL-GRFGGSIVKELHRMGHEVLAVDINEEKVNAYA--------SYATHAVIANATEENELLSL------GIRNF   71 (144)
T ss_dssp             CSEEEECC-SHHHHHHHHHHHHTTCCCEEEESCHHHHHTTT--------TTCSEEEECCTTCHHHHHTT------TGGGC
T ss_pred             CcEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH--------HhCCEEEEeCCCCHHHHHhc------CCCCC
Confidence            35899998 99999999999999999999999875543321        12345677899886655432      12478


Q ss_pred             eEEEEcCCC
Q 025509           81 NILINNAGI   89 (251)
Q Consensus        81 d~lv~~ag~   89 (251)
                      |++|++++.
T Consensus        72 d~vi~~~~~   80 (144)
T 2hmt_A           72 EYVIVAIGA   80 (144)
T ss_dssp             SEEEECCCS
T ss_pred             CEEEECCCC
Confidence            999999873

>1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A

Probab=98.27  E-value=2e-05  Score=67.12  Aligned_cols=104  Identities=18%  Similarity=0.148  Sum_probs=67.1

Q ss_pred             EEEEECCCChhHHHHHHHHHHcC--CEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCC
Q 025509            2 DIVITGATSGIGTETARVLALRG--VHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQ   79 (251)
Q Consensus         2 ~vlItG~s~gIG~a~a~~l~~~G--~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~   79 (251)
                      +|+||||+|.+|.+++..|+++|  ..|+++++++.  +....++.+......+..    +.+.+++.+.++       .
T Consensus        10 KI~ViGAaG~VG~~la~~L~~~g~~~ev~l~Di~~~--~~~~~dL~~~~~~~~v~~----~~~t~d~~~al~-------g   76 (326)
T 1smk_A           10 KVAILGAAGGIGQPLAMLMKMNPLVSVLHLYDVVNA--PGVTADISHMDTGAVVRG----FLGQQQLEAALT-------G   76 (326)
T ss_dssp             EEEEETTTSTTHHHHHHHHHHCTTEEEEEEEESSSH--HHHHHHHHTSCSSCEEEE----EESHHHHHHHHT-------T
T ss_pred             EEEEECCCChHHHHHHHHHHhCCCCCEEEEEeCCCc--HhHHHHhhcccccceEEE----EeCCCCHHHHcC-------C
Confidence            69999999999999999999988  68999998765  223333433211112222    223344443333       7


Q ss_pred             eeEEEEcCCCCCCCCcCCchhhHHHHHHHHHHHHHHHHHHHHH
Q 025509           80 LNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDT  122 (251)
Q Consensus        80 id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~  122 (251)
                      .|+||++||...... .+   -.+.+..|+.....+.+.+.++
T Consensus        77 aDvVi~~ag~~~~~g-~~---r~dl~~~N~~~~~~i~~~i~~~  115 (326)
T 1smk_A           77 MDLIIVPAGVPRKPG-MT---RDDLFKINAGIVKTLCEGIAKC  115 (326)
T ss_dssp             CSEEEECCCCCCCSS-CC---CSHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCEEEEcCCcCCCCC-CC---HHHHHHHHHHHHHHHHHHHHhh
Confidence            899999999654321 12   2345788888877777766554

>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5

Probab=98.22  E-value=2.5e-06  Score=70.89  Aligned_cols=72  Identities=15%  Similarity=0.309  Sum_probs=53.5

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      |+++|+|+ ||+|++++..|++.|++|++++|+.++++++.+++...  + .+.  ..|+   +++       .+  +++
T Consensus       120 k~vlViGa-Gg~g~a~a~~L~~~G~~V~v~~R~~~~~~~la~~~~~~--~-~~~--~~~~---~~~-------~~--~~~  181 (271)
T 1nyt_A          120 LRILLIGA-GGASRGVLLPLLSLDCAVTITNRTVSRAEELAKLFAHT--G-SIQ--ALSM---DEL-------EG--HEF  181 (271)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHTGGG--S-SEE--ECCS---GGG-------TT--CCC
T ss_pred             CEEEEECC-cHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHhhcc--C-Cee--EecH---HHh-------cc--CCC
Confidence            57999998 79999999999999999999999988887777655321  1 221  2333   211       11  589


Q ss_pred             eEEEEcCCCC
Q 025509           81 NILINNAGIM   90 (251)
Q Consensus        81 d~lv~~ag~~   90 (251)
                      |+||+|++..
T Consensus       182 DivVn~t~~~  191 (271)
T 1nyt_A          182 DLIINATSSG  191 (271)
T ss_dssp             SEEEECCSCG
T ss_pred             CEEEECCCCC
Confidence            9999999964

>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*

Probab=98.21  E-value=5.7e-06  Score=71.00  Aligned_cols=78  Identities=14%  Similarity=0.173  Sum_probs=55.0

Q ss_pred             CEEEEECCCChhHHHHHHHHHHc-CCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCC
Q 025509            1 MDIVITGATSGIGTETARVLALR-GVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQ   79 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~-G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~   79 (251)
                      ++|||+|+++|||.++++.+... |++|+++++++++.+.+. ++     +...   .+|.++.+..+. +.++... ++
T Consensus       172 ~~vlV~Gagg~iG~~~~~~a~~~~Ga~Vi~~~~~~~~~~~~~-~~-----g~~~---~~~~~~~~~~~~-~~~~~~~-~~  240 (347)
T 1jvb_A          172 KTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAK-RA-----GADY---VINASMQDPLAE-IRRITES-KG  240 (347)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHHHH-HH-----TCSE---EEETTTSCHHHH-HHHHTTT-SC
T ss_pred             CEEEEECCCccHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHH-Hh-----CCCE---EecCCCccHHHH-HHHHhcC-CC
Confidence            47999999999999999999999 999999999887765542 23     3322   235655433332 2333221 48


Q ss_pred             eeEEEEcCCC
Q 025509           80 LNILINNAGI   89 (251)
Q Consensus        80 id~lv~~ag~   89 (251)
                      +|++|+|+|.
T Consensus       241 ~d~vi~~~g~  250 (347)
T 1jvb_A          241 VDAVIDLNNS  250 (347)
T ss_dssp             EEEEEESCCC
T ss_pred             ceEEEECCCC
Confidence            9999999984

>1hye_A L-lactate/malate dehydrogenase; nucleotide binding domain, oxidoreductase; HET: NAP; 1.90A {Methanocaldococcus jannaschii} SCOP: c.2.1.5 d.162.1.1 PDB: 1hyg_A*

Probab=98.18  E-value=2.1e-05  Score=66.65  Aligned_cols=158  Identities=15%  Similarity=0.148  Sum_probs=92.6

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCC--EEEEEec--CchhHHHHHHHHHhhCC--CCceEEEEecCCCHHHHHHHHHHHH
Q 025509            1 MDIVITGATSGIGTETARVLALRGV--HVVMGVR--DIAAGKDVKETIVKEIP--SAKVDAMELDLSSLASVRNFASEYN   74 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~--~Vi~~~r--~~~~~~~~~~~~~~~~~--~~~v~~~~~D~~~~~~i~~~~~~~~   74 (251)
                      ++|+||||+|++|.+++..|+..|.  .+.++++  ++++++.....+.+..+  +..+.+...|    +++       .
T Consensus         1 mKI~V~GaaG~vG~~l~~~L~~~~~~~el~L~Di~~~~~~~~~~~~dl~~~~~~~~~~~~i~~~~----d~l-------~   69 (313)
T 1hye_A            1 MKVTIIGASGRVGSATALLLAKEPFMKDLVLIGREHSINKLEGLREDIYDALAGTRSDANIYVES----DEN-------L   69 (313)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHTCTTCCEEEEEECGGGHHHHHHHHHHHHHHHTTSCCCCEEEEEE----TTC-------G
T ss_pred             CEEEEECCCChhHHHHHHHHHhCCCCCEEEEEcCCCchhhhHHHHHHHHHhHHhcCCCeEEEeCC----cch-------H
Confidence            5799999999999999999998885  6888998  66555544444433211  1223333211    011       1


Q ss_pred             hcCCCeeEEEEcCCCCCCCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCccc
Q 025509           75 IQHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRF  154 (251)
Q Consensus        75 ~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~  154 (251)
                      +.+.+.|+||+.||......    +.-.+.++.|+.....+++++..+-         .+.++++|..........   +
T Consensus        70 ~al~gaD~Vi~~Ag~~~~~g----~~r~dl~~~N~~i~~~i~~~i~~~~---------~~~vlv~SNPv~~~t~~~---~  133 (313)
T 1hye_A           70 RIIDESDVVIITSGVPRKEG----MSRMDLAKTNAKIVGKYAKKIAEIC---------DTKIFVITNPVDVMTYKA---L  133 (313)
T ss_dssp             GGGTTCSEEEECCSCCCCTT----CCHHHHHHHHHHHHHHHHHHHHHHC---------CCEEEECSSSHHHHHHHH---H
T ss_pred             HHhCCCCEEEECCCCCCCCC----CcHHHHHHHHHHHHHHHHHHHHHhC---------CeEEEEecCcHHHHHHHH---H
Confidence            12237999999999754321    1234568889888877777766653         235555555333221100   0


Q ss_pred             ccCCCCCCCCcccccch-hHHHHHHHHHHHHHHhcc
Q 025509          155 DKINDPSGYNGFRAYSQ-SKLANILHANELARRLKE  189 (251)
Q Consensus       155 ~~~~~~~~~~~~~~Y~~-sK~a~~~~~~~la~e~~~  189 (251)
                          ...+.|....++. +..-...+...++..++-
T Consensus       134 ----k~~~~p~~rviG~gt~LD~~r~~~~la~~lgv  165 (313)
T 1hye_A          134 ----VDSKFERNQVFGLGTHLDSLRFKVAIAKFFGV  165 (313)
T ss_dssp             ----HHHCCCTTSEEECTTHHHHHHHHHHHHHHHTC
T ss_pred             ----HhhCcChhcEEEeCccHHHHHHHHHHHHHhCc
Confidence                0013444456776 665556667777777653

>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}

Probab=98.12  E-value=1.2e-05  Score=69.09  Aligned_cols=77  Identities=19%  Similarity=0.276  Sum_probs=55.8

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      ++|||+||+|+||.++++.+...|++|+++++++++.+.+.+ +     +...   ..|..+.+..+.+ .++.  .+++
T Consensus       169 ~~VlV~Gg~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~-l-----Ga~~---~~~~~~~~~~~~~-~~~~--~~g~  236 (353)
T 4dup_A          169 ESVLIHGGTSGIGTTAIQLARAFGAEVYATAGSTGKCEACER-L-----GAKR---GINYRSEDFAAVI-KAET--GQGV  236 (353)
T ss_dssp             CEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH-H-----TCSE---EEETTTSCHHHHH-HHHH--SSCE
T ss_pred             CEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHh-c-----CCCE---EEeCCchHHHHHH-HHHh--CCCc
Confidence            479999999999999999999999999999999877665433 3     3332   2355554333333 3332  4579


Q ss_pred             eEEEEcCCC
Q 025509           81 NILINNAGI   89 (251)
Q Consensus        81 d~lv~~ag~   89 (251)
                      |++|+|+|.
T Consensus       237 Dvvid~~g~  245 (353)
T 4dup_A          237 DIILDMIGA  245 (353)
T ss_dssp             EEEEESCCG
T ss_pred             eEEEECCCH
Confidence            999999983

>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9

Probab=98.12  E-value=2.3e-05  Score=57.59  Aligned_cols=74  Identities=22%  Similarity=0.306  Sum_probs=55.5

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      |+++|+|+ |.+|..+++.|.+.|++|++++++++..+...+    ..   .+.++..|.++.+.+.+      ....+.
T Consensus         5 m~i~IiG~-G~iG~~~a~~L~~~g~~v~~~d~~~~~~~~~~~----~~---~~~~~~~d~~~~~~l~~------~~~~~~   70 (140)
T 1lss_A            5 MYIIIAGI-GRVGYTLAKSLSEKGHDIVLIDIDKDICKKASA----EI---DALVINGDCTKIKTLED------AGIEDA   70 (140)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH----HC---SSEEEESCTTSHHHHHH------TTTTTC
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHH----hc---CcEEEEcCCCCHHHHHH------cCcccC
Confidence            46899987 999999999999999999999998766554432    21   35567789888766532      112368


Q ss_pred             eEEEEcCC
Q 025509           81 NILINNAG   88 (251)
Q Consensus        81 d~lv~~ag   88 (251)
                      |++|.+.+
T Consensus        71 d~vi~~~~   78 (140)
T 1lss_A           71 DMYIAVTG   78 (140)
T ss_dssp             SEEEECCS
T ss_pred             CEEEEeeC
Confidence            99999975

>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9

Probab=98.11  E-value=1.8e-05  Score=59.56  Aligned_cols=76  Identities=13%  Similarity=0.135  Sum_probs=57.1

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCc-hhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCC
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDI-AAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQ   79 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~-~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~   79 (251)
                      +.++|.|+ |.+|..+++.|.+.|++|+++++++ ++.+...+..     ...+.++..|.++++.+.+.      ...+
T Consensus         4 ~~vlI~G~-G~vG~~la~~L~~~g~~V~vid~~~~~~~~~~~~~~-----~~~~~~i~gd~~~~~~l~~a------~i~~   71 (153)
T 1id1_A            4 DHFIVCGH-SILAINTILQLNQRGQNVTVISNLPEDDIKQLEQRL-----GDNADVIPGDSNDSSVLKKA------GIDR   71 (153)
T ss_dssp             SCEEEECC-SHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHHH-----CTTCEEEESCTTSHHHHHHH------TTTT
T ss_pred             CcEEEECC-CHHHHHHHHHHHHCCCCEEEEECCChHHHHHHHHhh-----cCCCeEEEcCCCCHHHHHHc------Chhh
Confidence            35889986 9999999999999999999999974 4444443322     23578899999998776542      1236


Q ss_pred             eeEEEEcCC
Q 025509           80 LNILINNAG   88 (251)
Q Consensus        80 id~lv~~ag   88 (251)
                      .|.+|.+.+
T Consensus        72 ad~vi~~~~   80 (153)
T 1id1_A           72 CRAILALSD   80 (153)
T ss_dssp             CSEEEECSS
T ss_pred             CCEEEEecC
Confidence            889988876

>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A

Probab=98.11  E-value=1.5e-05  Score=66.63  Aligned_cols=76  Identities=18%  Similarity=0.336  Sum_probs=57.6

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCC-EEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCC
Q 025509            1 MDIVITGATSGIGTETARVLALRGV-HVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQ   79 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~   79 (251)
                      |+++|+|+ ||+|++++..|++.|+ +|++++|+.++++++.+++....++..+  ...+..+   +.+.+.       .
T Consensus       128 k~vlVlGa-GG~g~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~~~~~~~~i--~~~~~~~---l~~~l~-------~  194 (283)
T 3jyo_A          128 DSVVQVGA-GGVGNAVAYALVTHGVQKLQVADLDTSRAQALADVINNAVGREAV--VGVDARG---IEDVIA-------A  194 (283)
T ss_dssp             SEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHHHTSCCE--EEECSTT---HHHHHH-------H
T ss_pred             CEEEEECC-cHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhhcCCceE--EEcCHHH---HHHHHh-------c
Confidence            57999998 7999999999999999 7999999999999998888765443333  3334433   222222       4


Q ss_pred             eeEEEEcCCC
Q 025509           80 LNILINNAGI   89 (251)
Q Consensus        80 id~lv~~ag~   89 (251)
                      .|+||++.+.
T Consensus       195 ~DiVInaTp~  204 (283)
T 3jyo_A          195 ADGVVNATPM  204 (283)
T ss_dssp             SSEEEECSST
T ss_pred             CCEEEECCCC
Confidence            7999999875

>1o6z_A MDH, malate dehydrogenase; halophilic, ION-binding, protein-solvent interaction, oxidoreductase; HET: NAD; 1.95A {Haloarcula marismortui} SCOP: c.2.1.5 d.162.1.1 PDB: 1gt2_A* 2x0r_A* 2j5k_A 2j5q_A 2j5r_A 1d3a_A 1hlp_A* 2hlp_A

Probab=98.11  E-value=4.3e-05  Score=64.39  Aligned_cols=155  Identities=13%  Similarity=0.089  Sum_probs=88.2

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCC--EEEEEec--CchhHHHHHHHHHhhCC-CCceEEEEecCCCHHHHHHHHHHHHh
Q 025509            1 MDIVITGATSGIGTETARVLALRGV--HVVMGVR--DIAAGKDVKETIVKEIP-SAKVDAMELDLSSLASVRNFASEYNI   75 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~--~Vi~~~r--~~~~~~~~~~~~~~~~~-~~~v~~~~~D~~~~~~i~~~~~~~~~   75 (251)
                      ++|+||||+|.+|.+++..|+..|.  +++++++  ++++++.....+.+... ...+.+.. |  +.+.          
T Consensus         1 mKI~IiGAaG~vG~~l~~~L~~~~~~~el~L~Di~~~~~~~~~~~~dl~~~~~~~~~~~v~~-~--~~~a----------   67 (303)
T 1o6z_A            1 TKVSVVGAAGTVGAAAGYNIALRDIADEVVFVDIPDKEDDTVGQAADTNHGIAYDSNTRVRQ-G--GYED----------   67 (303)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCCSEEEEECCGGGHHHHHHHHHHHHHHHTTTCCCEEEE-C--CGGG----------
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCCCEEEEEcCCCChhhHHHHHHHHHHHHhhCCCcEEEe-C--CHHH----------
Confidence            5799999999999999999998875  6899998  77665554445544311 12333332 2  2111          


Q ss_pred             cCCCeeEEEEcCCCCCCCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccc
Q 025509           76 QHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFD  155 (251)
Q Consensus        76 ~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~  155 (251)
                       +...|+||+.||...... .+   -.+.+..|+.....+.+.+..+        ++.+.|+++|.........      
T Consensus        68 -~~~aDvVi~~ag~~~~~g-~~---r~dl~~~N~~i~~~i~~~i~~~--------~p~~~viv~SNPv~~~~~~------  128 (303)
T 1o6z_A           68 -TAGSDVVVITAGIPRQPG-QT---RIDLAGDNAPIMEDIQSSLDEH--------NDDYISLTTSNPVDLLNRH------  128 (303)
T ss_dssp             -GTTCSEEEECCCCCCCTT-CC---HHHHHHHHHHHHHHHHHHHHTT--------CSCCEEEECCSSHHHHHHH------
T ss_pred             -hCCCCEEEEcCCCCCCCC-CC---HHHHHHHHHHHHHHHHHHHHHH--------CCCcEEEEeCChHHHHHHH------
Confidence             237999999999754321 12   2345788887776666555443        1345666554433222100      


Q ss_pred             cCCCCCCCCcccccch-hHHHHHHHHHHHHHHhc
Q 025509          156 KINDPSGYNGFRAYSQ-SKLANILHANELARRLK  188 (251)
Q Consensus       156 ~~~~~~~~~~~~~Y~~-sK~a~~~~~~~la~e~~  188 (251)
                       +....+.|....++. +-.-...+-..++..++
T Consensus       129 -~~~~~~~p~~rviG~gt~Ld~~r~~~~la~~l~  161 (303)
T 1o6z_A          129 -LYEAGDRSREQVIGFGGRLDSARFRYVLSEEFD  161 (303)
T ss_dssp             -HHHHSSSCGGGEEECCHHHHHHHHHHHHHHHHT
T ss_pred             -HHHHcCCCHHHeeecccchhHHHHHHHHHHHhC
Confidence             000113344345555 33333455566666664

>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}

Probab=98.08  E-value=1.3e-05  Score=69.30  Aligned_cols=71  Identities=20%  Similarity=0.251  Sum_probs=58.0

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      |+|+|.|| |++|+.+|+.|++ .++|.+++++.++++++         ...+..+.+|++|.+++.++++       +.
T Consensus        17 mkilvlGa-G~vG~~~~~~L~~-~~~v~~~~~~~~~~~~~---------~~~~~~~~~d~~d~~~l~~~~~-------~~   78 (365)
T 3abi_A           17 MKVLILGA-GNIGRAIAWDLKD-EFDVYIGDVNNENLEKV---------KEFATPLKVDASNFDKLVEVMK-------EF   78 (365)
T ss_dssp             CEEEEECC-SHHHHHHHHHHTT-TSEEEEEESCHHHHHHH---------TTTSEEEECCTTCHHHHHHHHT-------TC
T ss_pred             cEEEEECC-CHHHHHHHHHHhc-CCCeEEEEcCHHHHHHH---------hccCCcEEEecCCHHHHHHHHh-------CC
Confidence            46999998 9999999999875 47999999988776654         2346778899999998887765       57


Q ss_pred             eEEEEcCCC
Q 025509           81 NILINNAGI   89 (251)
Q Consensus        81 d~lv~~ag~   89 (251)
                      |+||++++.
T Consensus        79 DvVi~~~p~   87 (365)
T 3abi_A           79 ELVIGALPG   87 (365)
T ss_dssp             SEEEECCCG
T ss_pred             CEEEEecCC
Confidence            999999874

>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}

Probab=98.06  E-value=1.8e-05  Score=67.71  Aligned_cols=77  Identities=13%  Similarity=0.201  Sum_probs=55.3

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      ++|||+|++|+||.++++.+...|++|+.+++++++.+.+. ++     +...   .+|.++.+ +.+.+.++.. ..++
T Consensus       168 ~~vlV~Gasg~iG~~~~~~a~~~G~~Vi~~~~~~~~~~~~~-~~-----ga~~---~~d~~~~~-~~~~~~~~~~-~~~~  236 (343)
T 2eih_A          168 DDVLVMAAGSGVSVAAIQIAKLFGARVIATAGSEDKLRRAK-AL-----GADE---TVNYTHPD-WPKEVRRLTG-GKGA  236 (343)
T ss_dssp             CEEEECSTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHHHH-HH-----TCSE---EEETTSTT-HHHHHHHHTT-TTCE
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-hc-----CCCE---EEcCCccc-HHHHHHHHhC-CCCc
Confidence            47999999999999999999999999999999987766553 23     3322   24776543 3232333321 2379


Q ss_pred             eEEEEcCC
Q 025509           81 NILINNAG   88 (251)
Q Consensus        81 d~lv~~ag   88 (251)
                      |++|+|+|
T Consensus       237 d~vi~~~g  244 (343)
T 2eih_A          237 DKVVDHTG  244 (343)
T ss_dssp             EEEEESSC
T ss_pred             eEEEECCC
Confidence            99999998

>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*

Probab=98.04  E-value=4.5e-05  Score=64.48  Aligned_cols=79  Identities=18%  Similarity=0.250  Sum_probs=58.1

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCC-EEEEEecC---chhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhc
Q 025509            1 MDIVITGATSGIGTETARVLALRGV-HVVMGVRD---IAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQ   76 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~-~Vi~~~r~---~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~   76 (251)
                      |++||+|+ ||+|++++..|++.|+ +|.++.|+   .++++++.+++.... +..+  ...+..+.+.+.+.+.     
T Consensus       149 k~~lVlGA-GGaaraia~~L~~~G~~~v~v~nRt~~~~~~a~~la~~~~~~~-~~~v--~~~~~~~l~~~~~~l~-----  219 (312)
T 3t4e_A          149 KTMVLLGA-GGAATAIGAQAAIEGIKEIKLFNRKDDFFEKAVAFAKRVNENT-DCVV--TVTDLADQHAFTEALA-----  219 (312)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTHHHHHHHHHHHHHHHS-SCEE--EEEETTCHHHHHHHHH-----
T ss_pred             CEEEEECc-CHHHHHHHHHHHHcCCCEEEEEECCCchHHHHHHHHHHhhhcc-Ccce--EEechHhhhhhHhhcc-----
Confidence            57999997 8999999999999998 89999999   777888888776653 2223  3345555433333222     


Q ss_pred             CCCeeEEEEcCCCC
Q 025509           77 HHQLNILINNAGIM   90 (251)
Q Consensus        77 ~g~id~lv~~ag~~   90 (251)
                        ..|+|||+.+..
T Consensus       220 --~~DiIINaTp~G  231 (312)
T 3t4e_A          220 --SADILTNGTKVG  231 (312)
T ss_dssp             --HCSEEEECSSTT
T ss_pred             --CceEEEECCcCC
Confidence              579999998753

>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*

Probab=98.02  E-value=4.9e-05  Score=62.24  Aligned_cols=79  Identities=15%  Similarity=0.323  Sum_probs=62.4

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCC-EEEEEecCc-------------------hhHHHHHHHHHhhCCCCceEEEEecC
Q 025509            1 MDIVITGATSGIGTETARVLALRGV-HVVMGVRDI-------------------AAGKDVKETIVKEIPSAKVDAMELDL   60 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~-~Vi~~~r~~-------------------~~~~~~~~~~~~~~~~~~v~~~~~D~   60 (251)
                      ++|+|.|+ ||+|.++++.|++.|. ++.+++++.                   .+.+.+.+.+.+..|...+..+..++
T Consensus        32 ~~VlVvG~-Gg~G~~va~~La~~Gv~~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~v~~~~~~~  110 (249)
T 1jw9_B           32 SRVLIVGL-GGLGCAASQYLASAGVGNLTLLDFDTVSLSNLQRQTLHSDATVGQPKVESARDALTRINPHIAITPVNALL  110 (249)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCSEEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEECSCC
T ss_pred             CeEEEEee-CHHHHHHHHHHHHcCCCeEEEEcCCCcccccCCcccccChhhcCcHHHHHHHHHHHHHCCCcEEEEEeccC
Confidence            47899986 7999999999999998 899999987                   78888888888877766777777667


Q ss_pred             CCHHHHHHHHHHHHhcCCCeeEEEEcCC
Q 025509           61 SSLASVRNFASEYNIQHHQLNILINNAG   88 (251)
Q Consensus        61 ~~~~~i~~~~~~~~~~~g~id~lv~~ag   88 (251)
                      ++ +.+.++++       ..|+||.+..
T Consensus       111 ~~-~~~~~~~~-------~~DvVi~~~d  130 (249)
T 1jw9_B          111 DD-AELAALIA-------EHDLVLDCTD  130 (249)
T ss_dssp             CH-HHHHHHHH-------TSSEEEECCS
T ss_pred             CH-hHHHHHHh-------CCCEEEEeCC
Confidence            53 44444332       6899998875

>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}

Probab=98.00  E-value=2.3e-05  Score=67.03  Aligned_cols=78  Identities=14%  Similarity=0.142  Sum_probs=55.0

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      ++|||+|++++||.++++.+...|++|+++++++++.+.+.+ +     +....   .|..+.+..+.+ .++.. ..++
T Consensus       146 ~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~-l-----ga~~~---~~~~~~~~~~~~-~~~~~-~~g~  214 (340)
T 3gms_A          146 DVLLVNACGSAIGHLFAQLSQILNFRLIAVTRNNKHTEELLR-L-----GAAYV---IDTSTAPLYETV-MELTN-GIGA  214 (340)
T ss_dssp             CEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSSTTHHHHHH-H-----TCSEE---EETTTSCHHHHH-HHHTT-TSCE
T ss_pred             CEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHh-C-----CCcEE---EeCCcccHHHHH-HHHhC-CCCC
Confidence            479999999999999999988899999999999887765543 3     33322   355543333333 22221 2379


Q ss_pred             eEEEEcCCC
Q 025509           81 NILINNAGI   89 (251)
Q Consensus        81 d~lv~~ag~   89 (251)
                      |++|+|+|.
T Consensus       215 Dvvid~~g~  223 (340)
T 3gms_A          215 DAAIDSIGG  223 (340)
T ss_dssp             EEEEESSCH
T ss_pred             cEEEECCCC
Confidence            999999983

>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*

Probab=97.99  E-value=2e-05  Score=67.13  Aligned_cols=78  Identities=15%  Similarity=0.220  Sum_probs=54.0

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      ++|||+||+|+||.++++.+...|++|+++++++++.+.+. ++     +...   ..|..+.+..+.+. ++.. ..++
T Consensus       150 ~~vlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~-~~-----ga~~---~~~~~~~~~~~~~~-~~~~-~~g~  218 (334)
T 3qwb_A          150 DYVLLFAAAGGVGLILNQLLKMKGAHTIAVASTDEKLKIAK-EY-----GAEY---LINASKEDILRQVL-KFTN-GKGV  218 (334)
T ss_dssp             CEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH-HT-----TCSE---EEETTTSCHHHHHH-HHTT-TSCE
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-Hc-----CCcE---EEeCCCchHHHHHH-HHhC-CCCc
Confidence            47999999999999999999999999999999887765432 22     3322   23555433333332 2221 2369


Q ss_pred             eEEEEcCCC
Q 025509           81 NILINNAGI   89 (251)
Q Consensus        81 d~lv~~ag~   89 (251)
                      |++|+|+|.
T Consensus       219 D~vid~~g~  227 (334)
T 3qwb_A          219 DASFDSVGK  227 (334)
T ss_dssp             EEEEECCGG
T ss_pred             eEEEECCCh
Confidence            999999983

>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*

Probab=97.99  E-value=2.5e-05  Score=66.34  Aligned_cols=78  Identities=14%  Similarity=0.178  Sum_probs=54.9

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      ++|||+||+|+||.++++.+...|++|+++++++++.+.+. ++     +...   ..|.++.+..+.+.+..  ...++
T Consensus       142 ~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~-~~-----Ga~~---~~~~~~~~~~~~~~~~~--~~~g~  210 (325)
T 3jyn_A          142 EIILFHAAAGGVGSLACQWAKALGAKLIGTVSSPEKAAHAK-AL-----GAWE---TIDYSHEDVAKRVLELT--DGKKC  210 (325)
T ss_dssp             CEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHH-HH-----TCSE---EEETTTSCHHHHHHHHT--TTCCE
T ss_pred             CEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-Hc-----CCCE---EEeCCCccHHHHHHHHh--CCCCc
Confidence            47999999999999999999999999999999887766543 23     3322   23555543333333322  12379


Q ss_pred             eEEEEcCCC
Q 025509           81 NILINNAGI   89 (251)
Q Consensus        81 d~lv~~ag~   89 (251)
                      |++|+|+|.
T Consensus       211 Dvvid~~g~  219 (325)
T 3jyn_A          211 PVVYDGVGQ  219 (325)
T ss_dssp             EEEEESSCG
T ss_pred             eEEEECCCh
Confidence            999999983

>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A

Probab=97.94  E-value=1.6e-05  Score=70.61  Aligned_cols=82  Identities=17%  Similarity=0.235  Sum_probs=55.2

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEE--ecCC---------CHHHHHHH
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAME--LDLS---------SLASVRNF   69 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~--~D~~---------~~~~i~~~   69 (251)
                      ++|||+|++|+||.++++.+...|++|+++++++++.+.+. ++     +....+-.  .|+.         +.+++..+
T Consensus       222 ~~VlV~GasG~iG~~a~qla~~~Ga~vi~~~~~~~~~~~~~-~l-----Ga~~~i~~~~~~~~~~~~~~~~~~~~~~~~~  295 (447)
T 4a0s_A          222 DIVLIWGASGGLGSYAIQFVKNGGGIPVAVVSSAQKEAAVR-AL-----GCDLVINRAELGITDDIADDPRRVVETGRKL  295 (447)
T ss_dssp             CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH-HT-----TCCCEEEHHHHTCCTTGGGCHHHHHHHHHHH
T ss_pred             CEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-hc-----CCCEEEecccccccccccccccccchhhhHH
Confidence            47999999999999999999999999999999877765542 22     33322221  1221         12344444


Q ss_pred             HHHHHhcC-CCeeEEEEcCC
Q 025509           70 ASEYNIQH-HQLNILINNAG   88 (251)
Q Consensus        70 ~~~~~~~~-g~id~lv~~ag   88 (251)
                      .+++.+.. +++|++|+|+|
T Consensus       296 ~~~v~~~~g~g~Dvvid~~G  315 (447)
T 4a0s_A          296 AKLVVEKAGREPDIVFEHTG  315 (447)
T ss_dssp             HHHHHHHHSSCCSEEEECSC
T ss_pred             HHHHHHHhCCCceEEEECCC
Confidence            44444432 36999999998

>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}

Probab=97.93  E-value=5.2e-05  Score=64.84  Aligned_cols=77  Identities=23%  Similarity=0.312  Sum_probs=53.4

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      ++|||+||+|+||.++++.+...|++|+++++++++.+.+.+ +     +... +  .|..  +++.+.+.++.. ..++
T Consensus       161 ~~VlV~Gasg~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~-~-----ga~~-v--~~~~--~~~~~~v~~~~~-~~g~  228 (342)
T 4eye_A          161 ETVLVLGAAGGIGTAAIQIAKGMGAKVIAVVNRTAATEFVKS-V-----GADI-V--LPLE--EGWAKAVREATG-GAGV  228 (342)
T ss_dssp             CEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHH-H-----TCSE-E--EESS--TTHHHHHHHHTT-TSCE
T ss_pred             CEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHh-c-----CCcE-E--ecCc--hhHHHHHHHHhC-CCCc
Confidence            479999999999999999999999999999999887654433 3     3322 2  2333  233333333321 1269


Q ss_pred             eEEEEcCCC
Q 025509           81 NILINNAGI   89 (251)
Q Consensus        81 d~lv~~ag~   89 (251)
                      |++|+|+|.
T Consensus       229 Dvvid~~g~  237 (342)
T 4eye_A          229 DMVVDPIGG  237 (342)
T ss_dssp             EEEEESCC-
T ss_pred             eEEEECCch
Confidence            999999984

>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*

Probab=97.88  E-value=0.00016  Score=60.46  Aligned_cols=86  Identities=14%  Similarity=0.314  Sum_probs=68.9

Q ss_pred             EEEEECCCChhHHHHHHHHHHcCC-EEEEEecCc------------------hhHHHHHHHHHhhCCCCceEEEEecCCC
Q 025509            2 DIVITGATSGIGTETARVLALRGV-HVVMGVRDI------------------AAGKDVKETIVKEIPSAKVDAMELDLSS   62 (251)
Q Consensus         2 ~vlItG~s~gIG~a~a~~l~~~G~-~Vi~~~r~~------------------~~~~~~~~~~~~~~~~~~v~~~~~D~~~   62 (251)
                      +|+|.|+ ||+|.++++.|++.|. ++.+++.+.                  .+.+.+.+.+.+..|..++..+..++++
T Consensus        38 ~VlVvGa-GGlGs~va~~La~aGVG~i~lvD~D~Ve~sNL~Rq~~~~~diG~~Ka~aa~~~L~~iNP~v~v~~~~~~l~~  116 (292)
T 3h8v_A           38 AVAIVGV-GGVGSVTAEMLTRCGIGKLLLFDYDKVELANMNRLFFQPHQAGLSKVQAAEHTLRNINPDVLFEVHNYNITT  116 (292)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHTCSEEEEECCCBC------------CCTTSBHHHHHHHHHHHHCTTSEEEEECCCTTS
T ss_pred             eEEEECc-CHHHHHHHHHHHHcCCCEEEEECCCccChhhcccccCChhhcCchHHHHHHHHHHhhCCCcEEEEecccCCc
Confidence            6888875 7999999999999997 899999876                  6788888888888888888888888988


Q ss_pred             HHHHHHHHHHHHhc----CCCeeEEEEcCC
Q 025509           63 LASVRNFASEYNIQ----HHQLNILINNAG   88 (251)
Q Consensus        63 ~~~i~~~~~~~~~~----~g~id~lv~~ag   88 (251)
                      .+.+..+++.+...    ....|+||.+.-
T Consensus       117 ~~~~~~~~~~~~~~~l~~~~~~DlVid~~D  146 (292)
T 3h8v_A          117 VENFQHFMDRISNGGLEEGKPVDLVLSCVD  146 (292)
T ss_dssp             HHHHHHHHHHHHHBSSSTTBCCSEEEECCS
T ss_pred             HHHHHHHhhhhcccccccCCCCCEEEECCc
Confidence            77777777654321    136899987764

>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*

Probab=97.86  E-value=2.1e-05  Score=65.31  Aligned_cols=72  Identities=18%  Similarity=0.270  Sum_probs=53.3

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      |+++|+|+ ||+|++++..|++.|++|+++.|+.++++++.+.+...  . .+..  .|+   ++       +. . +..
T Consensus       120 ~~vlvlGa-Gg~g~a~a~~L~~~G~~v~v~~R~~~~a~~l~~~~~~~--~-~~~~--~~~---~~-------~~-~-~~~  181 (272)
T 1p77_A          120 QHVLILGA-GGATKGVLLPLLQAQQNIVLANRTFSKTKELAERFQPY--G-NIQA--VSM---DS-------IP-L-QTY  181 (272)
T ss_dssp             CEEEEECC-SHHHHTTHHHHHHTTCEEEEEESSHHHHHHHHHHHGGG--S-CEEE--EEG---GG-------CC-C-SCC
T ss_pred             CEEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcccc--C-CeEE--eeH---HH-------hc-c-CCC
Confidence            57999998 79999999999999999999999998888887766331  1 2222  232   11       10 1 479


Q ss_pred             eEEEEcCCCC
Q 025509           81 NILINNAGIM   90 (251)
Q Consensus        81 d~lv~~ag~~   90 (251)
                      |+||++++..
T Consensus       182 DivIn~t~~~  191 (272)
T 1p77_A          182 DLVINATSAG  191 (272)
T ss_dssp             SEEEECCCC-
T ss_pred             CEEEECCCCC
Confidence            9999999864

>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}

Probab=97.85  E-value=8e-05  Score=63.80  Aligned_cols=78  Identities=17%  Similarity=0.083  Sum_probs=54.3

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      +++||+||+|+||.+.++.+...|++|+++++++++.+.+. ++     +...   ..|..+.+..+.+ .++... .++
T Consensus       166 ~~vli~gg~g~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~-~~-----Ga~~---~~~~~~~~~~~~v-~~~~~~-~g~  234 (349)
T 3pi7_A          166 KAFVMTAGASQLCKLIIGLAKEEGFRPIVTVRRDEQIALLK-DI-----GAAH---VLNEKAPDFEATL-REVMKA-EQP  234 (349)
T ss_dssp             SEEEESSTTSHHHHHHHHHHHHHTCEEEEEESCGGGHHHHH-HH-----TCSE---EEETTSTTHHHHH-HHHHHH-HCC
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-Hc-----CCCE---EEECCcHHHHHHH-HHHhcC-CCC
Confidence            47999999999999999999899999999999988866554 23     3322   2355443333332 222211 269


Q ss_pred             eEEEEcCCC
Q 025509           81 NILINNAGI   89 (251)
Q Consensus        81 d~lv~~ag~   89 (251)
                      |+++.|+|.
T Consensus       235 D~vid~~g~  243 (349)
T 3pi7_A          235 RIFLDAVTG  243 (349)
T ss_dssp             CEEEESSCH
T ss_pred             cEEEECCCC
Confidence            999999983

>1mld_A Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D)); HET: CIT; 1.83A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 2dfd_A*

Probab=97.84  E-value=0.00032  Score=59.32  Aligned_cols=119  Identities=16%  Similarity=0.145  Sum_probs=71.6

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcC--CEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCC
Q 025509            1 MDIVITGATSGIGTETARVLALRG--VHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHH   78 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G--~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g   78 (251)
                      ++|.|+||+|.+|.+++..|++.|  ..|+++++++  .+.....+.+.....++....    ..++.++.+       .
T Consensus         1 mKI~IiGa~G~VG~~la~~L~~~~~~~ev~L~Di~~--~~~~a~dL~~~~~~~~l~~~~----~t~d~~~a~-------~   67 (314)
T 1mld_A            1 AKVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAH--TPGVAADLSHIETRATVKGYL----GPEQLPDCL-------K   67 (314)
T ss_dssp             CEEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSS--HHHHHHHHTTSSSSCEEEEEE----SGGGHHHHH-------T
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCCcEEEEEeCCc--cHHHHHHHhccCcCceEEEec----CCCCHHHHh-------C
Confidence            579999999999999999999888  5899999987  333444443322111222221    011222222       2


Q ss_pred             CeeEEEEcCCCCCCCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccc
Q 025509           79 QLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGH  144 (251)
Q Consensus        79 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~  144 (251)
                      ..|++|+++|...... .+.   .+.+..|+.....+.+.+    .+.    ++.++++++|-...
T Consensus        68 ~aDvVvi~ag~~~~~g-~~r---~dl~~~n~~i~~~i~~~i----~~~----~p~a~viv~sNPv~  121 (314)
T 1mld_A           68 GCDVVVIPAGVPRKPG-MTR---DDLFNTNATIVATLTAAC----AQH----CPDAMICIISNPVN  121 (314)
T ss_dssp             TCSEEEECCSCCCCTT-CCG---GGGHHHHHHHHHHHHHHH----HHH----CTTSEEEECSSCHH
T ss_pred             CCCEEEECCCcCCCCC-CcH---HHHHHHHHHHHHHHHHHH----Hhh----CCCeEEEEECCCcc
Confidence            7899999999754322 222   223566665554444444    443    24678888876544

>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A

Probab=97.83  E-value=6.7e-05  Score=66.79  Aligned_cols=82  Identities=13%  Similarity=0.213  Sum_probs=57.5

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEE--ec--------CCCHHHHHHHH
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAME--LD--------LSSLASVRNFA   70 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~--~D--------~~~~~~i~~~~   70 (251)
                      ++|||+|++|+||...++.+...|++|+++++++++++.+ +++     +....+-.  .|        ..+.++++++.
T Consensus       230 ~~VlV~GasG~vG~~avqlak~~Ga~vi~~~~~~~~~~~~-~~l-----Ga~~vi~~~~~d~~~~~~~~~~~~~~~~~~~  303 (456)
T 3krt_A          230 DNVLIWGASGGLGSYATQFALAGGANPICVVSSPQKAEIC-RAM-----GAEAIIDRNAEGYRFWKDENTQDPKEWKRFG  303 (456)
T ss_dssp             CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHH-HHH-----TCCEEEETTTTTCCSEEETTEECHHHHHHHH
T ss_pred             CEEEEECCCCHHHHHHHHHHHHcCCeEEEEECCHHHHHHH-Hhh-----CCcEEEecCcCcccccccccccchHHHHHHH
Confidence            3699999999999999999989999999999887776654 333     33322211  11        23455666666


Q ss_pred             HHHHhcC--CCeeEEEEcCC
Q 025509           71 SEYNIQH--HQLNILINNAG   88 (251)
Q Consensus        71 ~~~~~~~--g~id~lv~~ag   88 (251)
                      +++.+..  .++|++|.++|
T Consensus       304 ~~i~~~t~g~g~Dvvid~~G  323 (456)
T 3krt_A          304 KRIRELTGGEDIDIVFEHPG  323 (456)
T ss_dssp             HHHHHHHTSCCEEEEEECSC
T ss_pred             HHHHHHhCCCCCcEEEEcCC
Confidence            6655432  37999999998

>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*

Probab=97.82  E-value=5.5e-05  Score=65.25  Aligned_cols=76  Identities=12%  Similarity=0.199  Sum_probs=53.4

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      ++|||+||+|+||.++++.+...|++|+++++++++.+.+.+ +     +... +  .|..+. ++.+.+.++.  .+++
T Consensus       165 ~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~-~-----Ga~~-~--~~~~~~-~~~~~~~~~~--~~g~  232 (362)
T 2c0c_A          165 KKVLVTAAAGGTGQFAMQLSKKAKCHVIGTCSSDEKSAFLKS-L-----GCDR-P--INYKTE-PVGTVLKQEY--PEGV  232 (362)
T ss_dssp             CEEEETTTTBTTHHHHHHHHHHTTCEEEEEESSHHHHHHHHH-T-----TCSE-E--EETTTS-CHHHHHHHHC--TTCE
T ss_pred             CEEEEeCCCcHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHH-c-----CCcE-E--EecCCh-hHHHHHHHhc--CCCC
Confidence            479999999999999999999999999999998766654432 2     3332 1  344432 2333333332  2479


Q ss_pred             eEEEEcCC
Q 025509           81 NILINNAG   88 (251)
Q Consensus        81 d~lv~~ag   88 (251)
                      |++|+|+|
T Consensus       233 D~vid~~g  240 (362)
T 2c0c_A          233 DVVYESVG  240 (362)
T ss_dssp             EEEEECSC
T ss_pred             CEEEECCC
Confidence            99999998

>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}

Probab=97.80  E-value=0.00012  Score=54.29  Aligned_cols=72  Identities=13%  Similarity=0.080  Sum_probs=56.8

Q ss_pred             EEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCee
Q 025509            2 DIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQLN   81 (251)
Q Consensus         2 ~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~id   81 (251)
                      +++|.|+ |.+|..+++.|.+.|++|++++++++..+.+.+        ..+.++..|.++++.+++.      .....|
T Consensus         9 ~viIiG~-G~~G~~la~~L~~~g~~v~vid~~~~~~~~~~~--------~g~~~i~gd~~~~~~l~~a------~i~~ad   73 (140)
T 3fwz_A            9 HALLVGY-GRVGSLLGEKLLASDIPLVVIETSRTRVDELRE--------RGVRAVLGNAANEEIMQLA------HLECAK   73 (140)
T ss_dssp             CEEEECC-SHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHH--------TTCEEEESCTTSHHHHHHT------TGGGCS
T ss_pred             CEEEECc-CHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHH--------cCCCEEECCCCCHHHHHhc------CcccCC
Confidence            5889987 889999999999999999999999877665442        2467788999998766542      112678


Q ss_pred             EEEEcCC
Q 025509           82 ILINNAG   88 (251)
Q Consensus        82 ~lv~~ag   88 (251)
                      .+|.+.+
T Consensus        74 ~vi~~~~   80 (140)
T 3fwz_A           74 WLILTIP   80 (140)
T ss_dssp             EEEECCS
T ss_pred             EEEEECC
Confidence            8888875

>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}

Probab=97.78  E-value=0.00016  Score=61.82  Aligned_cols=75  Identities=13%  Similarity=0.180  Sum_probs=53.2

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      ++|||+||+|+||.+.++.+...|++|+.+++++++.+.+.+ +     +....   .|..+  ++.+.+.++  ..+++
T Consensus       152 ~~VlV~gg~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~-l-----Ga~~v---i~~~~--~~~~~~~~~--~~~g~  218 (346)
T 3fbg_A          152 KTLLIINGAGGVGSIATQIAKAYGLRVITTASRNETIEWTKK-M-----GADIV---LNHKE--SLLNQFKTQ--GIELV  218 (346)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTCEEEEECCSHHHHHHHHH-H-----TCSEE---ECTTS--CHHHHHHHH--TCCCE
T ss_pred             CEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHh-c-----CCcEE---EECCc--cHHHHHHHh--CCCCc
Confidence            479999999999999999999999999999998877655443 3     33221   24432  233333333  23479


Q ss_pred             eEEEEcCC
Q 025509           81 NILINNAG   88 (251)
Q Consensus        81 d~lv~~ag   88 (251)
                      |+++.|+|
T Consensus       219 Dvv~d~~g  226 (346)
T 3fbg_A          219 DYVFCTFN  226 (346)
T ss_dssp             EEEEESSC
T ss_pred             cEEEECCC
Confidence            99999998

>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}

Probab=97.78  E-value=5.4e-05  Score=60.46  Aligned_cols=74  Identities=18%  Similarity=0.167  Sum_probs=58.1

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      |+++|.|+ |.+|.++|+.|.+.|++|++++++++..++..+.       ..+.++..|.++.+.+++.      .....
T Consensus         1 M~iiIiG~-G~~G~~la~~L~~~g~~v~vid~~~~~~~~l~~~-------~~~~~i~gd~~~~~~l~~a------~i~~a   66 (218)
T 3l4b_C            1 MKVIIIGG-ETTAYYLARSMLSRKYGVVIINKDRELCEEFAKK-------LKATIIHGDGSHKEILRDA------EVSKN   66 (218)
T ss_dssp             CCEEEECC-HHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHH-------SSSEEEESCTTSHHHHHHH------TCCTT
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHH-------cCCeEEEcCCCCHHHHHhc------CcccC
Confidence            57899996 8999999999999999999999998776654432       2467888999997766642      12367


Q ss_pred             eEEEEcCC
Q 025509           81 NILINNAG   88 (251)
Q Consensus        81 d~lv~~ag   88 (251)
                      |++|.+.+
T Consensus        67 d~vi~~~~   74 (218)
T 3l4b_C           67 DVVVILTP   74 (218)
T ss_dssp             CEEEECCS
T ss_pred             CEEEEecC
Confidence            88888775

>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*

Probab=97.77  E-value=4.1e-05  Score=57.81  Aligned_cols=74  Identities=15%  Similarity=0.139  Sum_probs=53.9

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      ++++|.|+ |.+|..+++.|.+.|++|++++|++++.+.+.+       .....++..|..+.+.+.+.      ...+.
T Consensus        20 ~~v~IiG~-G~iG~~la~~L~~~g~~V~vid~~~~~~~~~~~-------~~g~~~~~~d~~~~~~l~~~------~~~~a   85 (155)
T 2g1u_A           20 KYIVIFGC-GRLGSLIANLASSSGHSVVVVDKNEYAFHRLNS-------EFSGFTVVGDAAEFETLKEC------GMEKA   85 (155)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCGGGGGGSCT-------TCCSEEEESCTTSHHHHHTT------TGGGC
T ss_pred             CcEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHh-------cCCCcEEEecCCCHHHHHHc------CcccC
Confidence            46899986 999999999999999999999999876543210       12345677888876544321      12368


Q ss_pred             eEEEEcCC
Q 025509           81 NILINNAG   88 (251)
Q Consensus        81 d~lv~~ag   88 (251)
                      |++|.+.+
T Consensus        86 d~Vi~~~~   93 (155)
T 2g1u_A           86 DMVFAFTN   93 (155)
T ss_dssp             SEEEECSS
T ss_pred             CEEEEEeC
Confidence            99999986

>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A

Probab=97.74  E-value=0.00014  Score=62.15  Aligned_cols=75  Identities=17%  Similarity=0.110  Sum_probs=53.3

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      ++|||+|+ |+||.++++.+...|++|+.+++++++.+.+.+ +     +..   ..+|.++.+ +.+.+.++.   +++
T Consensus       166 ~~VlV~Ga-G~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~-l-----Ga~---~~~d~~~~~-~~~~~~~~~---~~~  231 (339)
T 1rjw_A          166 EWVAIYGI-GGLGHVAVQYAKAMGLNVVAVDIGDEKLELAKE-L-----GAD---LVVNPLKED-AAKFMKEKV---GGV  231 (339)
T ss_dssp             CEEEEECC-STTHHHHHHHHHHTTCEEEEECSCHHHHHHHHH-T-----TCS---EEECTTTSC-HHHHHHHHH---SSE
T ss_pred             CEEEEECC-CHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH-C-----CCC---EEecCCCcc-HHHHHHHHh---CCC
Confidence            47999999 889999999999999999999998877665432 2     332   124766533 333233332   479


Q ss_pred             eEEEEcCCC
Q 025509           81 NILINNAGI   89 (251)
Q Consensus        81 d~lv~~ag~   89 (251)
                      |++|+++|.
T Consensus       232 d~vid~~g~  240 (339)
T 1rjw_A          232 HAAVVTAVS  240 (339)
T ss_dssp             EEEEESSCC
T ss_pred             CEEEECCCC
Confidence            999999983

>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A

Probab=97.74  E-value=0.00014  Score=62.77  Aligned_cols=74  Identities=19%  Similarity=0.208  Sum_probs=53.8

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      ++|+|+|+ |++|+++++.+...|++|++++|++++++.+.+...     ..+..   +..+.+++.+.+.       ..
T Consensus       168 ~~VlViGa-GgvG~~aa~~a~~~Ga~V~v~dr~~~r~~~~~~~~~-----~~~~~---~~~~~~~~~~~~~-------~~  231 (361)
T 1pjc_A          168 GKVVILGG-GVVGTEAAKMAVGLGAQVQIFDINVERLSYLETLFG-----SRVEL---LYSNSAEIETAVA-------EA  231 (361)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHG-----GGSEE---EECCHHHHHHHHH-------TC
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHhhC-----ceeEe---eeCCHHHHHHHHc-------CC
Confidence            47999999 999999999999999999999999888777654331     12222   2234444443222       68


Q ss_pred             eEEEEcCCCC
Q 025509           81 NILINNAGIM   90 (251)
Q Consensus        81 d~lv~~ag~~   90 (251)
                      |++|++++..
T Consensus       232 DvVI~~~~~~  241 (361)
T 1pjc_A          232 DLLIGAVLVP  241 (361)
T ss_dssp             SEEEECCCCT
T ss_pred             CEEEECCCcC
Confidence            9999999863

>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}

Probab=97.73  E-value=5.5e-05  Score=63.55  Aligned_cols=73  Identities=18%  Similarity=0.196  Sum_probs=51.8

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCC-EEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCC
Q 025509            1 MDIVITGATSGIGTETARVLALRGV-HVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQ   79 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~   79 (251)
                      |+++|+|+ ||+|++++..|++.|+ +|+++.|+.++++++.+.+....   . .++     +.+++.       +....
T Consensus       142 ~~vlVlGa-Gg~g~aia~~L~~~G~~~V~v~nR~~~ka~~la~~~~~~~---~-~~~-----~~~~~~-------~~~~~  204 (297)
T 2egg_A          142 KRILVIGA-GGGARGIYFSLLSTAAERIDMANRTVEKAERLVREGDERR---S-AYF-----SLAEAE-------TRLAE  204 (297)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHSCSSS---C-CEE-----CHHHHH-------HTGGG
T ss_pred             CEEEEECc-HHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhhhcc---C-cee-----eHHHHH-------hhhcc
Confidence            57999997 7999999999999998 99999999888777665541110   0 111     222222       22347


Q ss_pred             eeEEEEcCCCC
Q 025509           80 LNILINNAGIM   90 (251)
Q Consensus        80 id~lv~~ag~~   90 (251)
                      .|+||++++..
T Consensus       205 aDivIn~t~~~  215 (297)
T 2egg_A          205 YDIIINTTSVG  215 (297)
T ss_dssp             CSEEEECSCTT
T ss_pred             CCEEEECCCCC
Confidence            89999999864

>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*

Probab=97.70  E-value=0.0001  Score=63.53  Aligned_cols=72  Identities=17%  Similarity=0.293  Sum_probs=50.5

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCc---hhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcC
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDI---AAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQH   77 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~---~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~   77 (251)
                      ++|||+|+ |+||.++++.+...|++|+++++++   ++.+.+ +++     +.  ..+  | .+  ++.+.+.+ ..  
T Consensus       182 ~~VlV~Ga-G~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~-~~~-----ga--~~v--~-~~--~~~~~~~~-~~--  244 (366)
T 2cdc_A          182 RKVLVVGT-GPIGVLFTLLFRTYGLEVWMANRREPTEVEQTVI-EET-----KT--NYY--N-SS--NGYDKLKD-SV--  244 (366)
T ss_dssp             CEEEEESC-HHHHHHHHHHHHHHTCEEEEEESSCCCHHHHHHH-HHH-----TC--EEE--E-CT--TCSHHHHH-HH--
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCccchHHHHHH-HHh-----CC--cee--c-hH--HHHHHHHH-hC--
Confidence            47999999 9999999999999999999999987   665333 233     33  223  5 44  22222222 22  


Q ss_pred             CCeeEEEEcCCC
Q 025509           78 HQLNILINNAGI   89 (251)
Q Consensus        78 g~id~lv~~ag~   89 (251)
                      +++|++|+++|.
T Consensus       245 ~~~d~vid~~g~  256 (366)
T 2cdc_A          245 GKFDVIIDATGA  256 (366)
T ss_dssp             CCEEEEEECCCC
T ss_pred             CCCCEEEECCCC
Confidence            579999999984

>5mdh_A Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH(D)); HET: NAD; 2.40A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 4mdh_A*

Probab=97.68  E-value=0.00049  Score=58.64  Aligned_cols=118  Identities=13%  Similarity=0.055  Sum_probs=72.1

Q ss_pred             EEEEECCCChhHHHHHHHHHHcCC--E-----EEEEecCc--hhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHH
Q 025509            2 DIVITGATSGIGTETARVLALRGV--H-----VVMGVRDI--AAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASE   72 (251)
Q Consensus         2 ~vlItG~s~gIG~a~a~~l~~~G~--~-----Vi~~~r~~--~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~   72 (251)
                      +|+||||+|.||.+++..|+..|.  +     +++.++++  ++++....++.+.... ...-+.  ..+  ...     
T Consensus         5 kV~V~GaaG~VG~~la~~L~~~~~~~e~~~~~l~L~Di~~~~~~~~g~a~DL~~~~~~-~~~~~~--~~~--~~~-----   74 (333)
T 5mdh_A            5 RVLVTGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDITPMMGVLDGVLMELQDCALP-LLKDVI--ATD--KEE-----   74 (333)
T ss_dssp             EEEESSTTSHHHHTTHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTCCT-TEEEEE--EES--CHH-----
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCccccCCCEEEEEeCCCccccchhhHhhhHhhhhc-ccCCEE--EcC--CcH-----
Confidence            699999999999999999998875  4     89999874  4566666666653111 111111  111  111     


Q ss_pred             HHhcCCCeeEEEEcCCCCCCCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCc-eEEEEcCcc
Q 025509           73 YNIQHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEG-RIINVSSEG  143 (251)
Q Consensus        73 ~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g-~iv~vsS~~  143 (251)
                        +.+...|++|+.||....+.+    .-.+.++.|......+.    +.+.+.    ++.+ +++++|...
T Consensus        75 --~~~~daDvVvitAg~prkpG~----tR~dll~~N~~i~~~i~----~~i~~~----~~~~~~vivvsNPv  132 (333)
T 5mdh_A           75 --IAFKDLDVAILVGSMPRRDGM----ERKDLLKANVKIFKCQG----AALDKY----AKKSVKVIVVGNPA  132 (333)
T ss_dssp             --HHTTTCSEEEECCSCCCCTTC----CTTTTHHHHHHHHHHHH----HHHHHH----SCTTCEEEECSSSH
T ss_pred             --HHhCCCCEEEEeCCCCCCCCC----CHHHHHHHHHHHHHHHH----HHHHHh----CCCCeEEEEcCCch
Confidence              122378999999997543221    23345777776654444    444444    2345 588887643

>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*

Probab=97.66  E-value=0.00018  Score=62.41  Aligned_cols=74  Identities=18%  Similarity=0.242  Sum_probs=54.6

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      ++|+|+|+ |+||.++++.+...|++|++++|++++++.+.+.+     +..+.   .+.++.+++.+.+.       ..
T Consensus       169 ~~V~ViG~-G~iG~~~a~~a~~~Ga~V~~~d~~~~~l~~~~~~~-----g~~~~---~~~~~~~~l~~~l~-------~a  232 (377)
T 2vhw_A          169 ADVVVIGA-GTAGYNAARIANGMGATVTVLDINIDKLRQLDAEF-----CGRIH---TRYSSAYELEGAVK-------RA  232 (377)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHT-----TTSSE---EEECCHHHHHHHHH-------HC
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHhc-----CCeeE---eccCCHHHHHHHHc-------CC
Confidence            57999998 99999999999999999999999987766554332     33322   23445555554443       58


Q ss_pred             eEEEEcCCCC
Q 025509           81 NILINNAGIM   90 (251)
Q Consensus        81 d~lv~~ag~~   90 (251)
                      |+||++++..
T Consensus       233 DvVi~~~~~p  242 (377)
T 2vhw_A          233 DLVIGAVLVP  242 (377)
T ss_dssp             SEEEECCCCT
T ss_pred             CEEEECCCcC
Confidence            9999999853

>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}

Probab=97.66  E-value=0.00022  Score=60.99  Aligned_cols=74  Identities=19%  Similarity=0.336  Sum_probs=50.6

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      ++|||+||+|+||.++++.+...|++|+++ +++++.+.+ +++     +...    +| .+. ++.+.+.++.. ..++
T Consensus       152 ~~VlV~Ga~g~iG~~~~q~a~~~Ga~Vi~~-~~~~~~~~~-~~l-----Ga~~----i~-~~~-~~~~~~~~~~~-~~g~  217 (343)
T 3gaz_A          152 QTVLIQGGGGGVGHVAIQIALARGARVFAT-ARGSDLEYV-RDL-----GATP----ID-ASR-EPEDYAAEHTA-GQGF  217 (343)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEE-ECHHHHHHH-HHH-----TSEE----EE-TTS-CHHHHHHHHHT-TSCE
T ss_pred             CEEEEecCCCHHHHHHHHHHHHCCCEEEEE-eCHHHHHHH-HHc-----CCCE----ec-cCC-CHHHHHHHHhc-CCCc
Confidence            479999999999999999999999999998 776665433 323     4332    34 332 23333333322 2379


Q ss_pred             eEEEEcCC
Q 025509           81 NILINNAG   88 (251)
Q Consensus        81 d~lv~~ag   88 (251)
                      |+++.|+|
T Consensus       218 D~vid~~g  225 (343)
T 3gaz_A          218 DLVYDTLG  225 (343)
T ss_dssp             EEEEESSC
T ss_pred             eEEEECCC
Confidence            99999998

>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D

Probab=97.63  E-value=0.00014  Score=60.95  Aligned_cols=72  Identities=11%  Similarity=0.174  Sum_probs=51.0

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      ++|||+|++|++|.++++.+...|++|+.+++++++.+.+.+ +     +...   ..|..+.+++.   +.+    +++
T Consensus       127 ~~vlV~Ga~G~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~-~-----ga~~---~~~~~~~~~~~---~~~----~~~  190 (302)
T 1iz0_A          127 EKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEKLALPLA-L-----GAEE---AATYAEVPERA---KAW----GGL  190 (302)
T ss_dssp             CEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSGGGSHHHHH-T-----TCSE---EEEGGGHHHHH---HHT----TSE
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHh-c-----CCCE---EEECCcchhHH---HHh----cCc
Confidence            479999999999999999999999999999998877665432 2     3321   13554412222   222    479


Q ss_pred             eEEEEcCCC
Q 025509           81 NILINNAGI   89 (251)
Q Consensus        81 d~lv~~ag~   89 (251)
                      |++|+ +|.
T Consensus       191 d~vid-~g~  198 (302)
T 1iz0_A          191 DLVLE-VRG  198 (302)
T ss_dssp             EEEEE-CSC
T ss_pred             eEEEE-CCH
Confidence            99999 873

>1p9o_A Phosphopantothenoylcysteine synthetase; ligase; 2.30A {Homo sapiens} SCOP: c.72.3.1

Probab=97.63  E-value=0.00015  Score=60.99  Aligned_cols=89  Identities=13%  Similarity=0.107  Sum_probs=55.8

Q ss_pred             EEEEECCCC-----------------h-hHHHHHHHHHHcCCEEEEEecCchhHH------HH--HHHHHhhC-CCCceE
Q 025509            2 DIVITGATS-----------------G-IGTETARVLALRGVHVVMGVRDIAAGK------DV--KETIVKEI-PSAKVD   54 (251)
Q Consensus         2 ~vlItG~s~-----------------g-IG~a~a~~l~~~G~~Vi~~~r~~~~~~------~~--~~~~~~~~-~~~~v~   54 (251)
                      +||||+|.+                 | .|.++|++++++|+.|+++.+...-..      ..  .+.+.... .+..+.
T Consensus        39 ~VLITaGgT~EpID~DpVRfItN~SSGkmG~aiAe~~~~~Ga~V~lv~g~~sl~p~~r~~~~~~~~~~~~~~~~~~~~~~  118 (313)
T 1p9o_A           39 VVLVTSGGTKVPLEARPVRFLDNFSSGRRGATSAEAFLAAGYGVLFLYRARSAFPYAHRFPPQTWLSALRPSGPALSGLL  118 (313)
T ss_dssp             EEEEEESBCEEESSSSCSEEEEECCCCHHHHHHHHHHHHTTCEEEEEEETTSCCTTGGGSCHHHHHHHCEECCC-CCSEE
T ss_pred             EEEEeCCCcccccCCCceeEecCCCCcHHHHHHHHHHHHCCCEEEEEecCCCcCcchhccCccchhhhhccccccccccc
Confidence            388997765                 6 999999999999999999988532100      00  01000000 012344


Q ss_pred             EEEecCCCHHHHHHHHHHH------------------------------HhcCCCeeEEEEcCCCC
Q 025509           55 AMELDLSSLASVRNFASEY------------------------------NIQHHQLNILINNAGIM   90 (251)
Q Consensus        55 ~~~~D~~~~~~i~~~~~~~------------------------------~~~~g~id~lv~~ag~~   90 (251)
                      .+.+|+.+.+++.+.+.+.                              ...++..|++|.+|++.
T Consensus       119 ~i~v~v~sa~~m~~av~~~~~~~~~~~l~~i~f~tv~eyl~~L~~~~~~l~~~~~~di~i~aAAVs  184 (313)
T 1p9o_A          119 SLEAEENALPGFAEALRSYQEAAAAGTFLVVEFTTLADYLHLLQAAAQALNPLGPSAMFYLAAAVS  184 (313)
T ss_dssp             EEEEETTTSTTHHHHHHHHHHHHHHTCEEEEEECBHHHHHHHHHHHHHHHGGGGGGEEEEECSBCC
T ss_pred             eeeeccccHHHHHHHHHHHhhhhccccceeeccccHHHHHHHHHHhhHHhhccCCCCEEEECCchh
Confidence            5666776666665555432                              23457899999999975

>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*

Probab=97.63  E-value=0.00022  Score=61.55  Aligned_cols=73  Identities=15%  Similarity=0.166  Sum_probs=53.1

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      ++|||+|+ |+||..+++.+...|++|+++++++++.+.+.+++     +...   ..|..+.+.+.+       ..+++
T Consensus       189 ~~VlV~Ga-G~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~l-----Ga~~---v~~~~~~~~~~~-------~~~~~  252 (366)
T 1yqd_A          189 KHIGIVGL-GGLGHVAVKFAKAFGSKVTVISTSPSKKEEALKNF-----GADS---FLVSRDQEQMQA-------AAGTL  252 (366)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCGGGHHHHHHTS-----CCSE---EEETTCHHHHHH-------TTTCE
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhc-----CCce---EEeccCHHHHHH-------hhCCC
Confidence            47999996 99999999999899999999999988766554322     3322   246666543322       22479


Q ss_pred             eEEEEcCCC
Q 025509           81 NILINNAGI   89 (251)
Q Consensus        81 d~lv~~ag~   89 (251)
                      |++|.++|.
T Consensus       253 D~vid~~g~  261 (366)
T 1yqd_A          253 DGIIDTVSA  261 (366)
T ss_dssp             EEEEECCSS
T ss_pred             CEEEECCCc
Confidence            999999985

>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A

Probab=97.62  E-value=0.00037  Score=57.01  Aligned_cols=79  Identities=19%  Similarity=0.351  Sum_probs=59.6

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCC-EEEEEecCc-------------------hhHHHHHHHHHhhCCCCceEEEEecC
Q 025509            1 MDIVITGATSGIGTETARVLALRGV-HVVMGVRDI-------------------AAGKDVKETIVKEIPSAKVDAMELDL   60 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~-~Vi~~~r~~-------------------~~~~~~~~~~~~~~~~~~v~~~~~D~   60 (251)
                      ++|+|.|+ ||+|.++++.|+..|. ++.+++++.                   .+++.+.+.+.+..|...+..+..++
T Consensus        29 ~~VlvvG~-GglG~~va~~La~~Gvg~i~lvD~d~v~~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~v~~~~~~~  107 (251)
T 1zud_1           29 SQVLIIGL-GGLGTPAALYLAGAGVGTLVLADDDDVHLSNLQRQILFTTEDIDRPKSQVSQQRLTQLNPDIQLTALQQRL  107 (251)
T ss_dssp             CEEEEECC-STTHHHHHHHHHHTTCSEEEEECCCBCCGGGTTTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEECSCC
T ss_pred             CcEEEEcc-CHHHHHHHHHHHHcCCCeEEEEeCCCcccccCCCCccCChhhCCCHHHHHHHHHHHHHCCCCEEEEEeccC
Confidence            36899987 6799999999999998 788886543                   57788888888877777777776666


Q ss_pred             CCHHHHHHHHHHHHhcCCCeeEEEEcCC
Q 025509           61 SSLASVRNFASEYNIQHHQLNILINNAG   88 (251)
Q Consensus        61 ~~~~~i~~~~~~~~~~~g~id~lv~~ag   88 (251)
                      + .+.+.++++       ..|+||.+..
T Consensus       108 ~-~~~~~~~~~-------~~DvVi~~~d  127 (251)
T 1zud_1          108 T-GEALKDAVA-------RADVVLDCTD  127 (251)
T ss_dssp             C-HHHHHHHHH-------HCSEEEECCS
T ss_pred             C-HHHHHHHHh-------cCCEEEECCC
Confidence            5 344544443       5799998764

>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}

Probab=97.61  E-value=0.00012  Score=56.65  Aligned_cols=73  Identities=14%  Similarity=0.130  Sum_probs=54.8

Q ss_pred             EEEEECCCChhHHHHHHHHHHc-CCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            2 DIVITGATSGIGTETARVLALR-GVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         2 ~vlItG~s~gIG~a~a~~l~~~-G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      +++|.| .|.+|..+++.|.+. |++|+++++++++.+.+.+        ..+.++..|.++.+.+.++     ....+.
T Consensus        41 ~v~IiG-~G~~G~~~a~~L~~~~g~~V~vid~~~~~~~~~~~--------~g~~~~~gd~~~~~~l~~~-----~~~~~a  106 (183)
T 3c85_A           41 QVLILG-MGRIGTGAYDELRARYGKISLGIEIREEAAQQHRS--------EGRNVISGDATDPDFWERI-----LDTGHV  106 (183)
T ss_dssp             SEEEEC-CSHHHHHHHHHHHHHHCSCEEEEESCHHHHHHHHH--------TTCCEEECCTTCHHHHHTB-----CSCCCC
T ss_pred             cEEEEC-CCHHHHHHHHHHHhccCCeEEEEECCHHHHHHHHH--------CCCCEEEcCCCCHHHHHhc-----cCCCCC
Confidence            588998 599999999999999 9999999999877655432        1356677899887654421     013468


Q ss_pred             eEEEEcCC
Q 025509           81 NILINNAG   88 (251)
Q Consensus        81 d~lv~~ag   88 (251)
                      |++|.+.+
T Consensus       107 d~vi~~~~  114 (183)
T 3c85_A          107 KLVLLAMP  114 (183)
T ss_dssp             CEEEECCS
T ss_pred             CEEEEeCC
Confidence            99998876

>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}

Probab=97.59  E-value=5.9e-05  Score=56.14  Aligned_cols=70  Identities=13%  Similarity=0.219  Sum_probs=51.3

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      ++++|.|+ |++|.++++.|.+.|++|++.+|++++.++..+++     +.  ...  +..+.+   +.++       ..
T Consensus        22 ~~v~iiG~-G~iG~~~a~~l~~~g~~v~v~~r~~~~~~~~a~~~-----~~--~~~--~~~~~~---~~~~-------~~   81 (144)
T 3oj0_A           22 NKILLVGN-GMLASEIAPYFSYPQYKVTVAGRNIDHVRAFAEKY-----EY--EYV--LINDID---SLIK-------NN   81 (144)
T ss_dssp             CEEEEECC-SHHHHHHGGGCCTTTCEEEEEESCHHHHHHHHHHH-----TC--EEE--ECSCHH---HHHH-------TC
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCEEEEEcCCHHHHHHHHHHh-----CC--ceE--eecCHH---HHhc-------CC
Confidence            57899996 99999999999999999999999988877766654     22  221  233332   2222       58


Q ss_pred             eEEEEcCCCC
Q 025509           81 NILINNAGIM   90 (251)
Q Consensus        81 d~lv~~ag~~   90 (251)
                      |++|.+.+..
T Consensus        82 Divi~at~~~   91 (144)
T 3oj0_A           82 DVIITATSSK   91 (144)
T ss_dssp             SEEEECSCCS
T ss_pred             CEEEEeCCCC
Confidence            9999998854

>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*

Probab=97.58  E-value=0.0018  Score=54.93  Aligned_cols=117  Identities=13%  Similarity=0.032  Sum_probs=76.6

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCC--EEEEEecCchhHHHHHHHHHhhCCC--CceEEEEecCCCHHHHHHHHHHHHhc
Q 025509            1 MDIVITGATSGIGTETARVLALRGV--HVVMGVRDIAAGKDVKETIVKEIPS--AKVDAMELDLSSLASVRNFASEYNIQ   76 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~--~Vi~~~r~~~~~~~~~~~~~~~~~~--~~v~~~~~D~~~~~~i~~~~~~~~~~   76 (251)
                      ++|.|+|+ |.+|.+++..|+..|.  +|+++++++++++.....+.+..|-  ..+.+...|   .           +.
T Consensus         6 ~kI~ViGa-G~vG~~~a~~l~~~~~~~~l~l~D~~~~k~~g~a~DL~~~~~~~~~~v~i~~~~---~-----------~a   70 (326)
T 3pqe_A            6 NKVALIGA-GFVGSSYAFALINQGITDELVVIDVNKEKAMGDVMDLNHGKAFAPQPVKTSYGT---Y-----------ED   70 (326)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHHTGGGSSSCCEEEEEC---G-----------GG
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCceEEEEecchHHHHHHHHHHHhccccccCCeEEEeCc---H-----------HH
Confidence            36899996 9999999999999986  8999999988888777667654321  233333222   1           12


Q ss_pred             CCCeeEEEEcCCCCCCCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccc
Q 025509           77 HHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGH  144 (251)
Q Consensus        77 ~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~  144 (251)
                      ....|++|.++|....+. ++   -.+.++.|..-    ++.+.+.+.+.    ++.+.++++|....
T Consensus        71 ~~~aDvVvi~ag~p~kpG-~~---R~dL~~~N~~I----v~~i~~~I~~~----~p~a~vlvvtNPvd  126 (326)
T 3pqe_A           71 CKDADIVCICAGANQKPG-ET---RLELVEKNLKI----FKGIVSEVMAS----GFDGIFLVATNPVD  126 (326)
T ss_dssp             GTTCSEEEECCSCCCCTT-CC---HHHHHHHHHHH----HHHHHHHHHHT----TCCSEEEECSSSHH
T ss_pred             hCCCCEEEEecccCCCCC-cc---HHHHHHHHHHH----HHHHHHHHHHh----cCCeEEEEcCChHH
Confidence            237899999999744322 12   23345666543    44555555544    25678888886543

>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}

Probab=97.56  E-value=0.0002  Score=59.37  Aligned_cols=70  Identities=14%  Similarity=0.279  Sum_probs=52.2

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCC-EEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCC
Q 025509            1 MDIVITGATSGIGTETARVLALRGV-HVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQ   79 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~   79 (251)
                      |+++|+|+ ||+|++++..|++.|+ +|.++.|+.++++++.+++..    ..+...  +..+   +.       .  ..
T Consensus       121 k~~lvlGa-Gg~~~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~~----~~~~~~--~~~~---l~-------~--~~  181 (272)
T 3pwz_A          121 RRVLLLGA-GGAVRGALLPFLQAGPSELVIANRDMAKALALRNELDH----SRLRIS--RYEA---LE-------G--QS  181 (272)
T ss_dssp             SEEEEECC-SHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHCC----TTEEEE--CSGG---GT-------T--CC
T ss_pred             CEEEEECc-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhcc----CCeeEe--eHHH---hc-------c--cC
Confidence            57999997 6999999999999996 999999999888888776632    123333  2221   11       1  36


Q ss_pred             eeEEEEcCCC
Q 025509           80 LNILINNAGI   89 (251)
Q Consensus        80 id~lv~~ag~   89 (251)
                      .|+||++.+.
T Consensus       182 ~DivInaTp~  191 (272)
T 3pwz_A          182 FDIVVNATSA  191 (272)
T ss_dssp             CSEEEECSSG
T ss_pred             CCEEEECCCC
Confidence            8999999864

>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*

Probab=97.56  E-value=0.00017  Score=59.98  Aligned_cols=71  Identities=17%  Similarity=0.276  Sum_probs=53.6

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCC-EEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCC
Q 025509            1 MDIVITGATSGIGTETARVLALRGV-HVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQ   79 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~   79 (251)
                      |+++|+|+ ||+|++++..|++.|+ +|.++.|+.++++++.+++....   .+.....  .+   +       .   ..
T Consensus       127 k~vlvlGa-Gg~g~aia~~L~~~G~~~v~v~~R~~~~a~~la~~~~~~~---~~~~~~~--~~---l-------~---~~  187 (281)
T 3o8q_A          127 ATILLIGA-GGAARGVLKPLLDQQPASITVTNRTFAKAEQLAELVAAYG---EVKAQAF--EQ---L-------K---QS  187 (281)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHTTCCSEEEEEESSHHHHHHHHHHHGGGS---CEEEEEG--GG---C-------C---SC
T ss_pred             CEEEEECc-hHHHHHHHHHHHhcCCCeEEEEECCHHHHHHHHHHhhccC---CeeEeeH--HH---h-------c---CC
Confidence            57999997 6999999999999997 99999999999888887774431   2333322  11   1       0   37


Q ss_pred             eeEEEEcCCCC
Q 025509           80 LNILINNAGIM   90 (251)
Q Consensus        80 id~lv~~ag~~   90 (251)
                      .|+||++.+..
T Consensus       188 aDiIInaTp~g  198 (281)
T 3o8q_A          188 YDVIINSTSAS  198 (281)
T ss_dssp             EEEEEECSCCC
T ss_pred             CCEEEEcCcCC
Confidence            89999998753

>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis}

Probab=97.53  E-value=0.0021  Score=54.93  Aligned_cols=117  Identities=15%  Similarity=0.101  Sum_probs=71.7

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCC--EEEEEecCchhHHHHHHHHHhh-CCCCceEEEEecCCCHHHHHHHHHHHHhcC
Q 025509            1 MDIVITGATSGIGTETARVLALRGV--HVVMGVRDIAAGKDVKETIVKE-IPSAKVDAMELDLSSLASVRNFASEYNIQH   77 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~--~Vi~~~r~~~~~~~~~~~~~~~-~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~   77 (251)
                      ++|.|+|++|++|.++|..++..|.  +|++++.++++++.....+.+. ++...+.+ .   ++.   .+.+       
T Consensus         9 ~KV~ViGaaG~VG~~~a~~l~~~g~~~evvLiDi~~~k~~g~a~DL~~~~~~~~~i~~-t---~d~---~~al-------   74 (343)
T 3fi9_A            9 EKLTIVGAAGMIGSNMAQTAAMMRLTPNLCLYDPFAVGLEGVAEEIRHCGFEGLNLTF-T---SDI---KEAL-------   74 (343)
T ss_dssp             SEEEEETTTSHHHHHHHHHHHHTTCCSCEEEECSCHHHHHHHHHHHHHHCCTTCCCEE-E---SCH---HHHH-------
T ss_pred             CEEEEECCCChHHHHHHHHHHhcCCCCEEEEEeCCchhHHHHHHhhhhCcCCCCceEE-c---CCH---HHHh-------
Confidence            4689999999999999999999984  7999999988877766666653 22222221 1   121   1111       


Q ss_pred             CCeeEEEEcCCCCCCCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCce-EEEEcCcc
Q 025509           78 HQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGR-IINVSSEG  143 (251)
Q Consensus        78 g~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~-iv~vsS~~  143 (251)
                      ...|++|.+||....+.    +.-.+.++.|..-    ++.+.+.+.+.    ++.+. ++++|...
T Consensus        75 ~dADvVvitaG~p~kpG----~~R~dLl~~N~~I----~~~i~~~i~~~----~p~a~~vlvvsNPv  129 (343)
T 3fi9_A           75 TDAKYIVSSGGAPRKEG----MTREDLLKGNAEI----AAQLGKDIKSY----CPDCKHVIIIFNPA  129 (343)
T ss_dssp             TTEEEEEECCC-----------CHHHHHHHHHHH----HHHHHHHHHHH----CTTCCEEEECSSSH
T ss_pred             CCCCEEEEccCCCCCCC----CCHHHHHHHHHHH----HHHHHHHHHHh----ccCcEEEEEecCch
Confidence            27899999999743321    1123445666544    45555555554    24564 67777543

>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1

Probab=97.48  E-value=0.0002  Score=60.65  Aligned_cols=75  Identities=21%  Similarity=0.290  Sum_probs=49.8

Q ss_pred             EEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCee
Q 025509            2 DIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQLN   81 (251)
Q Consensus         2 ~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~id   81 (251)
                      +|||+|++|++|...++.+...|++|+.+++++++.+.+.+ +     +....   +|..+.+  ...++++  ..+++|
T Consensus       152 ~VlV~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~~~~~~~~~~-l-----Ga~~~---i~~~~~~--~~~~~~~--~~~~~d  218 (328)
T 1xa0_A          152 PVLVTGATGGVGSLAVSMLAKRGYTVEASTGKAAEHDYLRV-L-----GAKEV---LAREDVM--AERIRPL--DKQRWA  218 (328)
T ss_dssp             CEEESSTTSHHHHHHHHHHHHTTCCEEEEESCTTCHHHHHH-T-----TCSEE---EECC-----------C--CSCCEE
T ss_pred             eEEEecCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH-c-----CCcEE---EecCCcH--HHHHHHh--cCCccc
Confidence            69999999999999999988899999999998777665432 2     33321   3444432  2222222  124799


Q ss_pred             EEEEcCCC
Q 025509           82 ILINNAGI   89 (251)
Q Consensus        82 ~lv~~ag~   89 (251)
                      ++|.++|.
T Consensus       219 ~vid~~g~  226 (328)
T 1xa0_A          219 AAVDPVGG  226 (328)
T ss_dssp             EEEECSTT
T ss_pred             EEEECCcH
Confidence            99999983

>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}

Probab=97.45  E-value=0.0004  Score=60.05  Aligned_cols=74  Identities=22%  Similarity=0.296  Sum_probs=49.6

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      ++|||+||+|+||..+++.+...|++|+.+++ +++.+.+ +++     +....   .|..+.+..    +++.+ .+++
T Consensus       185 ~~VlV~Ga~G~vG~~~~qla~~~Ga~Vi~~~~-~~~~~~~-~~l-----Ga~~v---~~~~~~~~~----~~~~~-~~g~  249 (375)
T 2vn8_A          185 KRVLILGASGGVGTFAIQVMKAWDAHVTAVCS-QDASELV-RKL-----GADDV---IDYKSGSVE----EQLKS-LKPF  249 (375)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEEC-GGGHHHH-HHT-----TCSEE---EETTSSCHH----HHHHT-SCCB
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCEEEEEeC-hHHHHHH-HHc-----CCCEE---EECCchHHH----HHHhh-cCCC
Confidence            47999999999999999988889999998884 4454333 222     33321   355443222    22322 2579


Q ss_pred             eEEEEcCCC
Q 025509           81 NILINNAGI   89 (251)
Q Consensus        81 d~lv~~ag~   89 (251)
                      |++|.++|.
T Consensus       250 D~vid~~g~  258 (375)
T 2vn8_A          250 DFILDNVGG  258 (375)
T ss_dssp             SEEEESSCT
T ss_pred             CEEEECCCC
Confidence            999999984

>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*

Probab=97.41  E-value=0.0024  Score=54.10  Aligned_cols=118  Identities=19%  Similarity=0.184  Sum_probs=72.9

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCC-EEEEEecCchhHHHHHHHHHhhCC--CCceEEEEecCCCHHHHHHHHHHHHhcC
Q 025509            1 MDIVITGATSGIGTETARVLALRGV-HVVMGVRDIAAGKDVKETIVKEIP--SAKVDAMELDLSSLASVRNFASEYNIQH   77 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~--~~~v~~~~~D~~~~~~i~~~~~~~~~~~   77 (251)
                      ++|.|+|+ |.+|.+++..|+..|. +|++.++++++++....++.+..+  +....+...  .+.+           ..
T Consensus         8 ~kI~viGa-G~vG~~~a~~l~~~~~~~v~L~Di~~~~~~g~~~dl~~~~~~~~~~~~v~~t--~d~~-----------a~   73 (324)
T 3gvi_A            8 NKIALIGS-GMIGGTLAHLAGLKELGDVVLFDIAEGTPQGKGLDIAESSPVDGFDAKFTGA--NDYA-----------AI   73 (324)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHHHHHHHTCCCCEEEE--SSGG-----------GG
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeCCchhHHHHHHHHhchhhhcCCCCEEEEe--CCHH-----------HH
Confidence            36899998 9999999999999998 999999999887655555544311  111222211  1211           12


Q ss_pred             CCeeEEEEcCCCCCCCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccc
Q 025509           78 HQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGH  144 (251)
Q Consensus        78 g~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~  144 (251)
                      ...|++|.++|....+.+ +.   .+.+..|.    .+++...+.+.+.    ++.+.++++|....
T Consensus        74 ~~aDiVIiaag~p~k~G~-~R---~dl~~~N~----~i~~~i~~~i~~~----~p~a~iivvtNPvd  128 (324)
T 3gvi_A           74 EGADVVIVTAGVPRKPGM-SR---DDLLGINL----KVMEQVGAGIKKY----APEAFVICITNPLD  128 (324)
T ss_dssp             TTCSEEEECCSCCCC---------CHHHHHHH----HHHHHHHHHHHHH----CTTCEEEECCSSHH
T ss_pred             CCCCEEEEccCcCCCCCC-CH---HHHHHhhH----HHHHHHHHHHHHH----CCCeEEEecCCCcH
Confidence            378999999997543221 21   22344444    4445555565554    25678888887543

>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*

Probab=97.40  E-value=0.0024  Score=53.35  Aligned_cols=117  Identities=12%  Similarity=0.067  Sum_probs=73.1

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCC--EEEEEecCchhHHHHHHHHHhhC--CCCceEEEEecCCCHHHHHHHHHHHHhc
Q 025509            1 MDIVITGATSGIGTETARVLALRGV--HVVMGVRDIAAGKDVKETIVKEI--PSAKVDAMELDLSSLASVRNFASEYNIQ   76 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~--~Vi~~~r~~~~~~~~~~~~~~~~--~~~~v~~~~~D~~~~~~i~~~~~~~~~~   76 (251)
                      |+|.|+|+ |.+|.+++..|+..|.  +|++.++++++++....++.+..  ......+...  +|.+.           
T Consensus         1 MkI~ViGa-G~vG~~la~~l~~~~~~~~v~L~D~~~~~~~g~~~dl~~~~~~~~~~~~i~~t--~d~~a-----------   66 (294)
T 1oju_A            1 MKLGFVGA-GRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGG--ADYSL-----------   66 (294)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHHTTTCCCEEEEE--SCGGG-----------
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCeEEEEECChHHHHHHHHHHHhhhhhcCCCCEEEEe--CCHHH-----------
Confidence            57899999 9999999999999987  89999999888764444443321  1112222211  12221           


Q ss_pred             CCCeeEEEEcCCCCCCCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCcc
Q 025509           77 HHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEG  143 (251)
Q Consensus        77 ~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~  143 (251)
                      ....|++|.++|....+- ++   -.+.++.|.    .+++...+.+.+.    ++.+.++++|...
T Consensus        67 ~~~aDiVViaag~~~kpG-~~---R~dl~~~N~----~i~~~i~~~i~~~----~p~a~iivvsNPv  121 (294)
T 1oju_A           67 LKGSEIIVVTAGLARKPG-MT---RLDLAHKNA----GIIKDIAKKIVEN----APESKILVVTNPM  121 (294)
T ss_dssp             GTTCSEEEECCCCCCCSS-CC---HHHHHHHHH----HHHHHHHHHHHTT----STTCEEEECSSSH
T ss_pred             hCCCCEEEECCCCCCCCC-Cc---HHHHHHHHH----HHHHHHHHHHHhh----CCCeEEEEeCCcc
Confidence            236899999999754322 22   223355553    4455556666554    3567888888643

>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ...

Probab=97.39  E-value=0.0074  Score=51.26  Aligned_cols=117  Identities=11%  Similarity=0.054  Sum_probs=76.3

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCC--EEEEEecCchhHHHHHHHHHhh--CCCCceEEEEecCCCHHHHHHHHHHHHhc
Q 025509            1 MDIVITGATSGIGTETARVLALRGV--HVVMGVRDIAAGKDVKETIVKE--IPSAKVDAMELDLSSLASVRNFASEYNIQ   76 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~--~Vi~~~r~~~~~~~~~~~~~~~--~~~~~v~~~~~D~~~~~~i~~~~~~~~~~   76 (251)
                      ++|.|+|+ |.+|.++|..|+.+|.  +|++.++++++++....++...  ++. ....+..  .+++           .
T Consensus        20 ~kV~ViGa-G~vG~~~a~~l~~~~~~~el~L~Di~~~~~~g~a~DL~~~~~~~~-~~~i~~~--~d~~-----------~   84 (331)
T 4aj2_A           20 NKITVVGV-GAVGMACAISILMKDLADELALVDVIEDKLKGEMMDLQHGSLFLK-TPKIVSS--KDYS-----------V   84 (331)
T ss_dssp             SEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHHHHTGGGCS-CCEEEEC--SSGG-----------G
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCceEEEEeCChHHHHHHHHhhhhhhhccC-CCeEEEc--CCHH-----------H
Confidence            46899997 9999999999999987  8999999988888877777653  221 1222222  1221           1


Q ss_pred             CCCeeEEEEcCCCCCCCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccc
Q 025509           77 HHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGH  144 (251)
Q Consensus        77 ~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~  144 (251)
                      ....|++|.+||....+- ++.   .+.++.|..=    ++.+.+.+.+.    ++.+.++++|....
T Consensus        85 ~~~aDiVvi~aG~~~kpG-~tR---~dL~~~N~~I----~~~i~~~i~~~----~p~a~vlvvtNPvd  140 (331)
T 4aj2_A           85 TANSKLVIITAGARQQEG-ESR---LNLVQRNVNI----FKFIIPNVVKY----SPQCKLLIVSNPVD  140 (331)
T ss_dssp             GTTEEEEEECCSCCCCTT-CCG---GGGHHHHHHH----HHHHHHHHHHH----CTTCEEEECSSSHH
T ss_pred             hCCCCEEEEccCCCCCCC-ccH---HHHHHHHHHH----HHHHHHHHHHH----CCCeEEEEecChHH
Confidence            237999999999754332 222   2345566543    44444555444    25688888887543

>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}

Probab=97.38  E-value=0.0014  Score=56.23  Aligned_cols=81  Identities=21%  Similarity=0.129  Sum_probs=57.8

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCE-EEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCC
Q 025509            1 MDIVITGATSGIGTETARVLALRGVH-VVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQ   79 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~-Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~   79 (251)
                      ++|||+|+ |++|...++.+...|++ |+.+++++++.+.+.+ +     ...+..+..|-.+.+++.+.+.++.. ..+
T Consensus       181 ~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~-l-----~~~~~~~~~~~~~~~~~~~~v~~~t~-g~g  252 (363)
T 3m6i_A          181 DPVLICGA-GPIGLITMLCAKAAGACPLVITDIDEGRLKFAKE-I-----CPEVVTHKVERLSAEESAKKIVESFG-GIE  252 (363)
T ss_dssp             CCEEEECC-SHHHHHHHHHHHHTTCCSEEEEESCHHHHHHHHH-H-----CTTCEEEECCSCCHHHHHHHHHHHTS-SCC
T ss_pred             CEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHH-h-----chhcccccccccchHHHHHHHHHHhC-CCC
Confidence            36899998 99999999988889997 9999998877655433 3     23344555565566666655554432 237


Q ss_pred             eeEEEEcCCC
Q 025509           80 LNILINNAGI   89 (251)
Q Consensus        80 id~lv~~ag~   89 (251)
                      +|+++.++|.
T Consensus       253 ~Dvvid~~g~  262 (363)
T 3m6i_A          253 PAVALECTGV  262 (363)
T ss_dssp             CSEEEECSCC
T ss_pred             CCEEEECCCC
Confidence            9999999983

>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}

Probab=97.37  E-value=0.00086  Score=57.69  Aligned_cols=76  Identities=12%  Similarity=0.119  Sum_probs=52.4

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      ++|||+| +|++|.+.++.+...|++|+++++++++.+.+ +++     +....   .| .+.+++.+.+.++.. ..++
T Consensus       191 ~~VlV~G-~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~-~~l-----Ga~~v---i~-~~~~~~~~~v~~~~~-g~g~  258 (363)
T 3uog_A          191 DRVVVQG-TGGVALFGLQIAKATGAEVIVTSSSREKLDRA-FAL-----GADHG---IN-RLEEDWVERVYALTG-DRGA  258 (363)
T ss_dssp             CEEEEES-SBHHHHHHHHHHHHTTCEEEEEESCHHHHHHH-HHH-----TCSEE---EE-TTTSCHHHHHHHHHT-TCCE
T ss_pred             CEEEEEC-CCHHHHHHHHHHHHcCCEEEEEecCchhHHHH-HHc-----CCCEE---Ec-CCcccHHHHHHHHhC-CCCc
Confidence            4799999 89999999999888999999999988776654 223     33222   24 333333333333322 2279


Q ss_pred             eEEEEcCC
Q 025509           81 NILINNAG   88 (251)
Q Consensus        81 d~lv~~ag   88 (251)
                      |+++.++|
T Consensus       259 D~vid~~g  266 (363)
T 3uog_A          259 DHILEIAG  266 (363)
T ss_dssp             EEEEEETT
T ss_pred             eEEEECCC
Confidence            99999998

>3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A*

Probab=97.35  E-value=0.0014  Score=55.76  Aligned_cols=59  Identities=15%  Similarity=0.300  Sum_probs=47.8

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCC-EEEEEecCc-------------------hhHHHHHHHHHhhCCCCceEEEEecC
Q 025509            1 MDIVITGATSGIGTETARVLALRGV-HVVMGVRDI-------------------AAGKDVKETIVKEIPSAKVDAMELDL   60 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~-~Vi~~~r~~-------------------~~~~~~~~~~~~~~~~~~v~~~~~D~   60 (251)
                      ++|+|.|+ ||+|.++++.|+..|. ++.+++++.                   .+.+.+.+.+.+..|..++..+..++
T Consensus        35 ~~VlIvGa-GGlGs~va~~La~aGVg~ItlvD~D~Ve~SNL~RQ~l~~~~diG~~Ka~aaa~~L~~inP~v~v~~~~~~i  113 (340)
T 3rui_A           35 TKVLLLGA-GTLGCYVSRALIAWGVRKITFVDNGTVSYSNPVRQALYNFEDCGKPKAELAAASLKRIFPLMDATGVKLSI  113 (340)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCEEEEECCCBCCTTSTTTSTTCCGGGTTSBHHHHHHHHHHHHCTTCEEEEECCCC
T ss_pred             CEEEEECC-CHHHHHHHHHHHHcCCCEEEEecCCEeccccccccccCChhhcChHHHHHHHHHHHHhCCCCEEEEEeccc
Confidence            36888875 7999999999999998 899988753                   56788888888888877777776555

>3hhp_A Malate dehydrogenase; MDH, citric acid cycle, TCA cycle, NAD, oxidoreductase, tricarboxylic acid cycle; 1.45A {Escherichia coli k-12} PDB: 2pwz_A 2cmd_A* 1emd_A* 1ib6_A* 1ie3_A* 4e0b_A*

Probab=97.32  E-value=0.0076  Score=50.77  Aligned_cols=117  Identities=16%  Similarity=0.154  Sum_probs=71.1

Q ss_pred             CEEEEECCCChhHHHHHHHHHHc-CC--EEEEEecCchhHHHHHHHHHhhCCCCceEEEEe-cCCCHHHHHHHHHHHHhc
Q 025509            1 MDIVITGATSGIGTETARVLALR-GV--HVVMGVRDIAAGKDVKETIVKEIPSAKVDAMEL-DLSSLASVRNFASEYNIQ   76 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~-G~--~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~-D~~~~~~i~~~~~~~~~~   76 (251)
                      ++|.|+||+|.+|.+++..|++. +.  +++++++++ +......++...  ...+.+... .-.+.+.+          
T Consensus         1 mKV~IiGAaG~VG~~~a~~L~~~~~~~~el~L~Di~~-~~~G~a~Dl~~~--~~~~~v~~~~~~~~~~~~----------   67 (312)
T 3hhp_A            1 MKVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAP-VTPGVAVDLSHI--PTAVKIKGFSGEDATPAL----------   67 (312)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHSCTTEEEEEECSST-THHHHHHHHHTS--CSSEEEEEECSSCCHHHH----------
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCCCceEEEEecCC-CchhHHHHhhCC--CCCceEEEecCCCcHHHh----------
Confidence            57899999999999999999876 53  799999987 444444445442  122222211 11122222          


Q ss_pred             CCCeeEEEEcCCCCCCCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCcc
Q 025509           77 HHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEG  143 (251)
Q Consensus        77 ~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~  143 (251)
                       ...|++|..||....+- ++   -.+.++.|..-.    +...+.+.+.    ++.+.++++|...
T Consensus        68 -~~aDivii~ag~~rkpG-~~---R~dll~~N~~I~----~~i~~~i~~~----~p~a~vlvvtNPv  121 (312)
T 3hhp_A           68 -EGADVVLISAGVARKPG-MD---RSDLFNVNAGIV----KNLVQQVAKT----CPKACIGIITNPV  121 (312)
T ss_dssp             -TTCSEEEECCSCSCCTT-CC---HHHHHHHHHHHH----HHHHHHHHHH----CTTSEEEECSSCH
T ss_pred             -CCCCEEEEeCCCCCCCC-CC---HHHHHHHHHHHH----HHHHHHHHHH----CCCcEEEEecCcc
Confidence             27999999999754322 12   344566665444    4444444443    2467888887643

>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*

Probab=97.31  E-value=0.00087  Score=57.26  Aligned_cols=77  Identities=16%  Similarity=0.165  Sum_probs=52.0

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCC-EEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCC
Q 025509            1 MDIVITGATSGIGTETARVLALRGV-HVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQ   79 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~   79 (251)
                      ++|||+|+ |++|.++++.+...|+ +|+.+++++++.+.+. ++     +...   ..|..+.+ +.+.+.++.. ..+
T Consensus       169 ~~VlV~Ga-G~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~-~~-----Ga~~---~~~~~~~~-~~~~v~~~~~-g~g  236 (348)
T 2d8a_A          169 KSVLITGA-GPLGLLGIAVAKASGAYPVIVSEPSDFRRELAK-KV-----GADY---VINPFEED-VVKEVMDITD-GNG  236 (348)
T ss_dssp             CCEEEECC-SHHHHHHHHHHHHTTCCSEEEECSCHHHHHHHH-HH-----TCSE---EECTTTSC-HHHHHHHHTT-TSC
T ss_pred             CEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHH-Hh-----CCCE---EECCCCcC-HHHHHHHHcC-CCC
Confidence            46999999 9999999999988999 9999999877655443 33     3321   23554432 2222333221 126


Q ss_pred             eeEEEEcCCC
Q 025509           80 LNILINNAGI   89 (251)
Q Consensus        80 id~lv~~ag~   89 (251)
                      +|++|.++|.
T Consensus       237 ~D~vid~~g~  246 (348)
T 2d8a_A          237 VDVFLEFSGA  246 (348)
T ss_dssp             EEEEEECSCC
T ss_pred             CCEEEECCCC
Confidence            9999999983

>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1

Probab=97.29  E-value=0.0025  Score=55.14  Aligned_cols=78  Identities=17%  Similarity=0.182  Sum_probs=52.5

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcC-CEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCC--CHHHHHHHHHHHHhcC
Q 025509            1 MDIVITGATSGIGTETARVLALRG-VHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLS--SLASVRNFASEYNIQH   77 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G-~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~--~~~~i~~~~~~~~~~~   77 (251)
                      ++|||+| +|++|...++.+...| ++|+.+++++++.+.+. ++     +... +  .|..  +.+++.+.+.++... 
T Consensus       197 ~~VlV~G-aG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~~-~l-----Ga~~-v--i~~~~~~~~~~~~~v~~~~~g-  265 (380)
T 1vj0_A          197 KTVVIQG-AGPLGLFGVVIARSLGAENVIVIAGSPNRLKLAE-EI-----GADL-T--LNRRETSVEERRKAIMDITHG-  265 (380)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHTTBSEEEEEESCHHHHHHHH-HT-----TCSE-E--EETTTSCHHHHHHHHHHHTTT-
T ss_pred             CEEEEEC-cCHHHHHHHHHHHHcCCceEEEEcCCHHHHHHHH-Hc-----CCcE-E--EeccccCcchHHHHHHHHhCC-
Confidence            4799999 8999999999888899 59999999887665443 22     3321 2  2443  234444434333221 


Q ss_pred             CCeeEEEEcCCC
Q 025509           78 HQLNILINNAGI   89 (251)
Q Consensus        78 g~id~lv~~ag~   89 (251)
                      .++|++|.++|.
T Consensus       266 ~g~Dvvid~~g~  277 (380)
T 1vj0_A          266 RGADFILEATGD  277 (380)
T ss_dssp             SCEEEEEECSSC
T ss_pred             CCCcEEEECCCC
Confidence            269999999984

>2x0j_A Malate dehydrogenase; oxidoreductase, hyperthermophilic, tricarboxylic acid cycle; HET: ENA; 2.79A {Archaeoglobus fulgidus dsm 4304} PDB: 2x0i_A*

Probab=97.29  E-value=0.0027  Score=53.11  Aligned_cols=116  Identities=12%  Similarity=0.097  Sum_probs=75.6

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCC--EEEEEecCchhHHHHHHHHHhhCC--CCceEEEEecCCCHHHHHHHHHHHHhc
Q 025509            1 MDIVITGATSGIGTETARVLALRGV--HVVMGVRDIAAGKDVKETIVKEIP--SAKVDAMELDLSSLASVRNFASEYNIQ   76 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~--~Vi~~~r~~~~~~~~~~~~~~~~~--~~~v~~~~~D~~~~~~i~~~~~~~~~~   76 (251)
                      |.|.|+|+ |+||.++|-.|+.++.  ++++.+.++++++.....+....+  +........+  |++.           
T Consensus         1 MKV~IiGa-G~VG~~~a~~l~~~~~~~el~L~Di~~~~~~G~a~DL~h~~~~~~~~~~i~~~~--d~~~-----------   66 (294)
T 2x0j_A            1 MKLGFVGA-GRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGGA--DYSL-----------   66 (294)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHGGGTCCCEEEEES--CGGG-----------
T ss_pred             CEEEEECc-CHHHHHHHHHHHhCCCCCEEEEEeCCCCcchhhhhhhhcccccCCCCCeEecCC--CHHH-----------
Confidence            57889995 9999999999998874  799999998777776666665321  2223333221  2221           


Q ss_pred             CCCeeEEEEcCCCCCCCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCc
Q 025509           77 HHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSE  142 (251)
Q Consensus        77 ~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~  142 (251)
                      ...-|++|..||....+- ++.   .+.++.|.    .+++.+.+.+.+.    ++++.++.+|..
T Consensus        67 ~~~aDvVvitAG~prkpG-mtR---~dLl~~Na----~I~~~i~~~i~~~----~p~aivlvvsNP  120 (294)
T 2x0j_A           67 LKGSEIIVVTAGLARKPG-MTR---LDLAHKNA----GIIKDIAKKIVEN----APESKILVVTNP  120 (294)
T ss_dssp             GTTCSEEEECCCCCCCSS-SCH---HHHHHHHH----HHHHHHHHHHHTT----STTCEEEECSSS
T ss_pred             hCCCCEEEEecCCCCCCC-Cch---HHHHHHHH----HHHHHHHHHHHhc----CCceEEEEecCc
Confidence            237899999999765432 232   34466664    3556666666654    356777777764

>1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A

Probab=97.28  E-value=0.00089  Score=57.51  Aligned_cols=83  Identities=14%  Similarity=0.136  Sum_probs=50.3

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCH--HHHHHHHHHHHh-cC
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSL--ASVRNFASEYNI-QH   77 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~--~~i~~~~~~~~~-~~   77 (251)
                      ++|||+||+|++|...++.+...|++|+.++++.++.++..+.+++.  +.... +  |..+.  +++.+.+.++.. ..
T Consensus       169 ~~VlV~Ga~G~vG~~aiqlak~~Ga~vi~~~~~~~~~~~~~~~~~~l--Ga~~v-i--~~~~~~~~~~~~~i~~~t~~~~  243 (364)
T 1gu7_A          169 DWFIQNGGTSAVGKYASQIGKLLNFNSISVIRDRPNLDEVVASLKEL--GATQV-I--TEDQNNSREFGPTIKEWIKQSG  243 (364)
T ss_dssp             CEEEESCTTSHHHHHHHHHHHHHTCEEEEEECCCTTHHHHHHHHHHH--TCSEE-E--EHHHHHCGGGHHHHHHHHHHHT
T ss_pred             cEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCccccHHHHHHHHhc--CCeEE-E--ecCccchHHHHHHHHHHhhccC
Confidence            47999999999999999888888999999987766533222222221  33321 1  22110  122222222220 12


Q ss_pred             CCeeEEEEcCC
Q 025509           78 HQLNILINNAG   88 (251)
Q Consensus        78 g~id~lv~~ag   88 (251)
                      +++|++|.++|
T Consensus       244 ~g~Dvvid~~G  254 (364)
T 1gu7_A          244 GEAKLALNCVG  254 (364)
T ss_dssp             CCEEEEEESSC
T ss_pred             CCceEEEECCC
Confidence            47999999998

>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*

Probab=97.27  E-value=0.0029  Score=53.68  Aligned_cols=116  Identities=12%  Similarity=0.170  Sum_probs=69.8

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCC--EEEEEecCchhHHHHHHHHHhhCC-CCceEEEEecCCCHHHHHHHHHHHHhcC
Q 025509            1 MDIVITGATSGIGTETARVLALRGV--HVVMGVRDIAAGKDVKETIVKEIP-SAKVDAMELDLSSLASVRNFASEYNIQH   77 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~--~Vi~~~r~~~~~~~~~~~~~~~~~-~~~v~~~~~D~~~~~~i~~~~~~~~~~~   77 (251)
                      ++|.|+|+ |.+|.++|..|+..|.  +|++.++++++++.....+.+..+ -..+.+.. |  +.           +..
T Consensus        10 ~kV~ViGa-G~vG~~~a~~l~~~~~~~el~l~D~~~~k~~g~a~DL~~~~~~~~~~~i~~-~--~~-----------~a~   74 (326)
T 3vku_A           10 QKVILVGD-GAVGSSYAYAMVLQGIAQEIGIVDIFKDKTKGDAIDLEDALPFTSPKKIYS-A--EY-----------SDA   74 (326)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHTTGGGSCCCEEEE-C--CG-----------GGG
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCeEEEEeCChHHHHHHHhhHhhhhhhcCCcEEEE-C--cH-----------HHh
Confidence            46899996 9999999999999887  899999998888877777765432 11233332 2  11           223


Q ss_pred             CCeeEEEEcCCCCCCCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCcc
Q 025509           78 HQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEG  143 (251)
Q Consensus        78 g~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~  143 (251)
                      ...|++|.+||....+- ++   -.+.++.|.    .+++.+.+.+.+.    ++.+.++++|...
T Consensus        75 ~~aDiVvi~ag~~~kpG-~t---R~dL~~~N~----~I~~~i~~~i~~~----~p~a~ilvvtNPv  128 (326)
T 3vku_A           75 KDADLVVITAGAPQKPG-ET---RLDLVNKNL----KILKSIVDPIVDS----GFNGIFLVAANPV  128 (326)
T ss_dssp             TTCSEEEECCCCC------------------------CHHHHHHHHHTT----TCCSEEEECSSSH
T ss_pred             cCCCEEEECCCCCCCCC-ch---HHHHHHHHH----HHHHHHHHHHHhc----CCceEEEEccCch
Confidence            47899999999753321 11   223345554    3345555555554    3567888888644

>3h5n_A MCCB protein; ubiquitin-activating enzyme, microcin, protein structure, MCCC7, peptide antibiotics, N-P bond formation, transferase; HET: ATP; 1.90A {Escherichia coli} PDB: 3h5r_A 3h9g_A 3h9j_A* 3h9q_A 3h5a_A

Probab=97.26  E-value=0.00081  Score=57.79  Aligned_cols=79  Identities=20%  Similarity=0.382  Sum_probs=62.0

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCC-EEEEEecCc-------------------hhHHHHHHHHHhhCCCCceEEEEecC
Q 025509            1 MDIVITGATSGIGTETARVLALRGV-HVVMGVRDI-------------------AAGKDVKETIVKEIPSAKVDAMELDL   60 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~-~Vi~~~r~~-------------------~~~~~~~~~~~~~~~~~~v~~~~~D~   60 (251)
                      ++|+|.|+ ||+|.++++.|+..|. ++.+++++.                   .+.+.+.+.+.+..|...+..+..++
T Consensus       119 ~~VlvvG~-GglGs~va~~La~aGvg~i~lvD~D~Ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~v~v~~~~~~i  197 (353)
T 3h5n_A          119 AKVVILGC-GGIGNHVSVILATSGIGEIILIDNDQIENTNLTRQVLFSEDDVGKNKTEVIKRELLKRNSEISVSEIALNI  197 (353)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCSEEEEEECCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEEECCC
T ss_pred             CeEEEECC-CHHHHHHHHHHHhCCCCeEEEECCCcCcccccccccCCChHHCCChHHHHHHHHHHHHCCCCeEEEeeccc
Confidence            36889987 8999999999999998 899998763                   36777888888888888888888888


Q ss_pred             CCHHHHHHHHHHHHhcCCCeeEEEEcCC
Q 025509           61 SSLASVRNFASEYNIQHHQLNILINNAG   88 (251)
Q Consensus        61 ~~~~~i~~~~~~~~~~~g~id~lv~~ag   88 (251)
                      ++...+.       + ..+.|+||.+..
T Consensus       198 ~~~~~~~-------~-~~~~DlVvd~~D  217 (353)
T 3h5n_A          198 NDYTDLH-------K-VPEADIWVVSAD  217 (353)
T ss_dssp             CSGGGGG-------G-SCCCSEEEECCC
T ss_pred             Cchhhhh-------H-hccCCEEEEecC
Confidence            7654222       2 457899998764

>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*

Probab=97.26  E-value=0.00094  Score=55.12  Aligned_cols=65  Identities=18%  Similarity=0.215  Sum_probs=50.1

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      |+++|.|+ ||.|++++..|++.|.+|.++.|+.++++++. ++     +  +...  +..+.              ...
T Consensus       119 k~vlvlGa-GGaaraia~~L~~~G~~v~V~nRt~~ka~~la-~~-----~--~~~~--~~~~l--------------~~~  173 (269)
T 3phh_A          119 QNALILGA-GGSAKALACELKKQGLQVSVLNRSSRGLDFFQ-RL-----G--CDCF--MEPPK--------------SAF  173 (269)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCTTHHHHH-HH-----T--CEEE--SSCCS--------------SCC
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HC-----C--CeEe--cHHHh--------------ccC
Confidence            57999996 89999999999999999999999999988877 44     2  2222  22221              168


Q ss_pred             eEEEEcCCCC
Q 025509           81 NILINNAGIM   90 (251)
Q Consensus        81 d~lv~~ag~~   90 (251)
                      |+||++.+..
T Consensus       174 DiVInaTp~G  183 (269)
T 3phh_A          174 DLIINATSAS  183 (269)
T ss_dssp             SEEEECCTTC
T ss_pred             CEEEEcccCC
Confidence            9999998753

>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1

Probab=97.25  E-value=0.017  Score=49.00  Aligned_cols=116  Identities=12%  Similarity=0.037  Sum_probs=73.8

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCC--EEEEEecCchhHHHHHHHHHhhCC-CCceEEE-EecCCCHHHHHHHHHHHHhc
Q 025509            1 MDIVITGATSGIGTETARVLALRGV--HVVMGVRDIAAGKDVKETIVKEIP-SAKVDAM-ELDLSSLASVRNFASEYNIQ   76 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~--~Vi~~~r~~~~~~~~~~~~~~~~~-~~~v~~~-~~D~~~~~~i~~~~~~~~~~   76 (251)
                      ++|.|+|+ |.+|.++|..|+..|.  .|++.++++++++.....+.+..+ .....+. ..|..              .
T Consensus        22 ~kV~ViGa-G~vG~~~a~~la~~g~~~ev~L~Di~~~~~~g~a~DL~~~~~~~~~~~i~~t~d~~--------------~   86 (330)
T 3ldh_A           22 NKITVVGC-DAVGMADAISVLMKDLADEVALVDVMEDKLKGEMMDLEHGSLFLHTAKIVSGKDYS--------------V   86 (330)
T ss_dssp             CEEEEEST-THHHHHHHHHHHHHCCCSEEEEECSCHHHHHHHHHHHHHHGGGSCCSEEEEESSSC--------------S
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCeEEEEECCHHHHHHHHHHhhhhhhcccCCeEEEcCCHH--------------H
Confidence            46899998 9999999999999997  899999998888777666665321 1111222 22321              1


Q ss_pred             CCCeeEEEEcCCCCCCCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCcc
Q 025509           77 HHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEG  143 (251)
Q Consensus        77 ~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~  143 (251)
                      +...|++|.+||....+-+ +..   +.+..|..    +.+...+.+.+.    ++.+.++++|...
T Consensus        87 ~~daDiVIitaG~p~kpG~-tR~---dll~~N~~----I~k~i~~~I~k~----~P~a~ilvvtNPv  141 (330)
T 3ldh_A           87 SAGSKLVVITAGARQQEGE-SRL---NLVQRNVN----IFKFIIPNIVKH----SPDCLKELHPELG  141 (330)
T ss_dssp             CSSCSEEEECCSCCCCSSC-CTT---GGGHHHHH----HHHHHHHHHHHH----CTTCEEEECSSSH
T ss_pred             hCCCCEEEEeCCCCCCCCC-CHH---HHHHhhHH----HHHHHHHHHHhh----CCCceEEeCCCcc
Confidence            3478999999997644322 221   22344433    334444555444    2567888887644

>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*

Probab=97.19  E-value=0.00072  Score=53.38  Aligned_cols=43  Identities=26%  Similarity=0.364  Sum_probs=37.9

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHH
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKET   43 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~   43 (251)
                      ++++|+||+|.+|.++++.|++.|++|.+.+|++++.++..+.
T Consensus         1 m~i~iiGa~G~~G~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~   43 (212)
T 1jay_A            1 MRVALLGGTGNLGKGLALRLATLGHEIVVGSRREEKAEAKAAE   43 (212)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSHHHHHHHHHH
T ss_pred             CeEEEEcCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH
Confidence            5789999999999999999999999999999998777665544

>1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1

Probab=97.19  E-value=0.0021  Score=55.18  Aligned_cols=76  Identities=16%  Similarity=0.132  Sum_probs=52.6

Q ss_pred             CEEEEECCCChhHHHHHHHHHHc-CCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCC
Q 025509            1 MDIVITGATSGIGTETARVLALR-GVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQ   79 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~-G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~   79 (251)
                      ++|||+|+ |++|...++.+... |++|+.+++++++.+.+. ++     +...   ..|..+.  +.+.+.++.. ..+
T Consensus       188 ~~VlV~Ga-G~vG~~avqlak~~~Ga~Vi~~~~~~~~~~~~~-~l-----Ga~~---vi~~~~~--~~~~v~~~~~-g~g  254 (359)
T 1h2b_A          188 AYVAIVGV-GGLGHIAVQLLKVMTPATVIALDVKEEKLKLAE-RL-----GADH---VVDARRD--PVKQVMELTR-GRG  254 (359)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHCCCEEEEEESSHHHHHHHH-HT-----TCSE---EEETTSC--HHHHHHHHTT-TCC
T ss_pred             CEEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHH-Hh-----CCCE---EEeccch--HHHHHHHHhC-CCC
Confidence            37999999 89999999988888 999999999877665543 22     3322   1355543  4343444322 127


Q ss_pred             eeEEEEcCCC
Q 025509           80 LNILINNAGI   89 (251)
Q Consensus        80 id~lv~~ag~   89 (251)
                      +|++|.++|.
T Consensus       255 ~Dvvid~~G~  264 (359)
T 1h2b_A          255 VNVAMDFVGS  264 (359)
T ss_dssp             EEEEEESSCC
T ss_pred             CcEEEECCCC
Confidence            9999999984

>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1

Probab=97.19  E-value=0.0032  Score=53.79  Aligned_cols=79  Identities=19%  Similarity=0.175  Sum_probs=50.8

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCC-HHHHHHHHHHHHh-cCC
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSS-LASVRNFASEYNI-QHH   78 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~-~~~i~~~~~~~~~-~~g   78 (251)
                      ++|||+|+ |++|...++.+...|++|+++++++++.+.+. ++     +... +  .|..+ .+..+++.+.... ..+
T Consensus       170 ~~VlV~Ga-G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~-~l-----Ga~~-~--~~~~~~~~~~~~i~~~~~~~~g~  239 (352)
T 1e3j_A          170 TTVLVIGA-GPIGLVSVLAAKAYGAFVVCTARSPRRLEVAK-NC-----GADV-T--LVVDPAKEEESSIIERIRSAIGD  239 (352)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-HT-----TCSE-E--EECCTTTSCHHHHHHHHHHHSSS
T ss_pred             CEEEEECC-CHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHH-Hh-----CCCE-E--EcCcccccHHHHHHHHhccccCC
Confidence            47999996 89999999988889999999999877665443 22     3332 2  24443 2222222222210 123


Q ss_pred             CeeEEEEcCCC
Q 025509           79 QLNILINNAGI   89 (251)
Q Consensus        79 ~id~lv~~ag~   89 (251)
                      ++|++|.++|.
T Consensus       240 g~D~vid~~g~  250 (352)
T 1e3j_A          240 LPNVTIDCSGN  250 (352)
T ss_dssp             CCSEEEECSCC
T ss_pred             CCCEEEECCCC
Confidence            69999999983

>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*

Probab=97.19  E-value=0.00065  Score=57.95  Aligned_cols=75  Identities=16%  Similarity=0.174  Sum_probs=51.2

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCC-EEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCC
Q 025509            1 MDIVITGATSGIGTETARVLALRGV-HVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQ   79 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~   79 (251)
                      ++|||+|+ |++|..+++.+...|+ +|+.+++++++.+.+.+     .    .. ...|..+. ++.+.+.++.  ..+
T Consensus       166 ~~VlV~Ga-G~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~~-----l----a~-~v~~~~~~-~~~~~~~~~~--~~g  231 (343)
T 2dq4_A          166 KSVLITGA-GPIGLMAAMVVRASGAGPILVSDPNPYRLAFARP-----Y----AD-RLVNPLEE-DLLEVVRRVT--GSG  231 (343)
T ss_dssp             SCEEEECC-SHHHHHHHHHHHHTTCCSEEEECSCHHHHGGGTT-----T----CS-EEECTTTS-CHHHHHHHHH--SSC
T ss_pred             CEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHH-----h----HH-hccCcCcc-CHHHHHHHhc--CCC
Confidence            36999999 9999999998888999 99999998766443211     1    11 12455542 3333344433  347


Q ss_pred             eeEEEEcCCC
Q 025509           80 LNILINNAGI   89 (251)
Q Consensus        80 id~lv~~ag~   89 (251)
                      +|++|.++|.
T Consensus       232 ~D~vid~~g~  241 (343)
T 2dq4_A          232 VEVLLEFSGN  241 (343)
T ss_dssp             EEEEEECSCC
T ss_pred             CCEEEECCCC
Confidence            9999999983

>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}

Probab=97.18  E-value=0.0013  Score=56.56  Aligned_cols=74  Identities=15%  Similarity=0.206  Sum_probs=49.8

Q ss_pred             EEEEECCCChhHHHHHHHHHH-cCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            2 DIVITGATSGIGTETARVLAL-RGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         2 ~vlItG~s~gIG~a~a~~l~~-~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      +|||+||+|++|...++.+.. .|++|+.+++++++.+.+.+ +     +....   .|..+  ++.+.+.++  ..+++
T Consensus       174 ~VlV~Ga~G~vG~~a~qlak~~~g~~Vi~~~~~~~~~~~~~~-l-----Gad~v---i~~~~--~~~~~v~~~--~~~g~  240 (363)
T 4dvj_A          174 AILIVGGAGGVGSIAVQIARQRTDLTVIATASRPETQEWVKS-L-----GAHHV---IDHSK--PLAAEVAAL--GLGAP  240 (363)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHH-T-----TCSEE---ECTTS--CHHHHHHTT--CSCCE
T ss_pred             EEEEECCCCHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHH-c-----CCCEE---EeCCC--CHHHHHHHh--cCCCc
Confidence            699999999999998877665 58899999998776654432 2     33321   24433  222223322  23479


Q ss_pred             eEEEEcCC
Q 025509           81 NILINNAG   88 (251)
Q Consensus        81 d~lv~~ag   88 (251)
                      |+++.++|
T Consensus       241 Dvvid~~g  248 (363)
T 4dvj_A          241 AFVFSTTH  248 (363)
T ss_dssp             EEEEECSC
T ss_pred             eEEEECCC
Confidence            99999998

>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}

Probab=97.17  E-value=0.0083  Score=50.76  Aligned_cols=117  Identities=14%  Similarity=0.177  Sum_probs=73.2

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCC-EEEEEecCchhHHHHHHHHHhhCC--CCceEEEEecCCCHHHHHHHHHHHHhcC
Q 025509            1 MDIVITGATSGIGTETARVLALRGV-HVVMGVRDIAAGKDVKETIVKEIP--SAKVDAMELDLSSLASVRNFASEYNIQH   77 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~--~~~v~~~~~D~~~~~~i~~~~~~~~~~~   77 (251)
                      ++|.|+| +|.+|.+++..|+..|. +|++.++++++++.....+.+..+  +....+...+  +.+           .+
T Consensus         6 ~kI~iiG-aG~vG~~~a~~l~~~~~~~v~l~Di~~~~~~g~a~dL~~~~~~~~~~~~v~~t~--d~~-----------a~   71 (321)
T 3p7m_A            6 KKITLVG-AGNIGGTLAHLALIKQLGDVVLFDIAQGMPNGKALDLLQTCPIEGVDFKVRGTN--DYK-----------DL   71 (321)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEES--CGG-----------GG
T ss_pred             CEEEEEC-CCHHHHHHHHHHHhCCCceEEEEeCChHHHHHHHHHHHhhhhhcCCCcEEEEcC--CHH-----------HH
Confidence            3688999 59999999999999887 999999998887766666654211  1122222111  211           22


Q ss_pred             CCeeEEEEcCCCCCCCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCcc
Q 025509           78 HQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEG  143 (251)
Q Consensus        78 g~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~  143 (251)
                      ...|++|..+|....+- ++   -.+.+..|..    +++...+.+.+.    ++.+.++++|...
T Consensus        72 ~~aDvVIi~ag~p~k~G-~~---R~dl~~~N~~----i~~~i~~~i~~~----~p~a~vivvtNPv  125 (321)
T 3p7m_A           72 ENSDVVIVTAGVPRKPG-MS---RDDLLGINIK----VMQTVGEGIKHN----CPNAFVICITNPL  125 (321)
T ss_dssp             TTCSEEEECCSCCCCTT-CC---HHHHHHHHHH----HHHHHHHHHHHH----CTTCEEEECCSSH
T ss_pred             CCCCEEEEcCCcCCCCC-CC---HHHHHHHhHH----HHHHHHHHHHHH----CCCcEEEEecCch
Confidence            37899999999754332 22   2334555543    445555555554    2467888887644

>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}

Probab=97.15  E-value=0.011  Score=49.93  Aligned_cols=117  Identities=18%  Similarity=0.182  Sum_probs=71.4

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCC-EEEEEecC--chhHHHHHHHHHhhCC--CCceEEEEecCCCHHHHHHHHHHHHh
Q 025509            1 MDIVITGATSGIGTETARVLALRGV-HVVMGVRD--IAAGKDVKETIVKEIP--SAKVDAMELDLSSLASVRNFASEYNI   75 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~-~Vi~~~r~--~~~~~~~~~~~~~~~~--~~~v~~~~~D~~~~~~i~~~~~~~~~   75 (251)
                      ++|.|+|+ |.+|.++|..|+..|. +|++.+++  +++++....++.+..+  +....+...+  +.           +
T Consensus         9 ~kv~ViGa-G~vG~~ia~~l~~~g~~~v~l~D~~~~~~~~~g~a~dl~~~~~~~~~~~~i~~t~--d~-----------~   74 (315)
T 3tl2_A            9 KKVSVIGA-GFTGATTAFLLAQKELADVVLVDIPQLENPTKGKALDMLEASPVQGFDANIIGTS--DY-----------A   74 (315)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCEEEEECCGGGHHHHHHHHHHHHHHHHHHTCCCCEEEES--CG-----------G
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeccchHHHHHHhhhhHHHhhhhccCCCEEEEcC--CH-----------H
Confidence            36899996 9999999999999999 99999998  5555544444433210  1111121111  11           1


Q ss_pred             cCCCeeEEEEcCCCCCCCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCcc
Q 025509           76 QHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEG  143 (251)
Q Consensus        76 ~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~  143 (251)
                      .+...|++|.++|....+. ++   -.+.++.|..-    .+...+.+.+.    ++.+.++++|...
T Consensus        75 a~~~aDvVIiaag~p~kpg-~~---R~dl~~~N~~i----~~~i~~~i~~~----~p~a~vlvvsNPv  130 (315)
T 3tl2_A           75 DTADSDVVVITAGIARKPG-MS---RDDLVATNSKI----MKSITRDIAKH----SPNAIIVVLTNPV  130 (315)
T ss_dssp             GGTTCSEEEECCSCCCCTT-CC---HHHHHHHHHHH----HHHHHHHHHHH----CTTCEEEECCSSH
T ss_pred             HhCCCCEEEEeCCCCCCCC-CC---HHHHHHHHHHH----HHHHHHHHHHh----CCCeEEEECCChH
Confidence            2347999999999754332 12   23445666543    44445555444    2467888888643

>2xxj_A L-LDH, L-lactate dehydrogenase; oxidoreductase, hyperthermophIle; HET: NAD; 1.964A {Thermus thermophilus} PDB: 2xxb_A* 3zzn_A* 2v7p_A* 2e37_A* 2v6m_A* 2xxe_A 4a73_A

Probab=97.15  E-value=0.0093  Score=50.19  Aligned_cols=117  Identities=20%  Similarity=0.209  Sum_probs=75.0

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcC--CEEEEEecCchhHHHHHHHHHhhCC-CCceEEEEecCCCHHHHHHHHHHHHhcC
Q 025509            1 MDIVITGATSGIGTETARVLALRG--VHVVMGVRDIAAGKDVKETIVKEIP-SAKVDAMELDLSSLASVRNFASEYNIQH   77 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G--~~Vi~~~r~~~~~~~~~~~~~~~~~-~~~v~~~~~D~~~~~~i~~~~~~~~~~~   77 (251)
                      ++|.|+|+ |.+|.+++..|+..+  .+|++.++++++++.....+.+..+ ...+.+.. |  +.++           +
T Consensus         1 ~KI~IiGa-G~vG~~~a~~l~~~~~~~el~L~Di~~~k~~g~a~dl~~~~~~~~~~~v~~-~--~~~a-----------~   65 (310)
T 2xxj_A            1 MKVGIVGS-GMVGSATAYALALLGVAREVVLVDLDRKLAQAHAEDILHATPFAHPVWVWA-G--SYGD-----------L   65 (310)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHHTTGGGSCCCEEEE-C--CGGG-----------G
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChhHHHHHHHHHHHhHhhcCCeEEEE-C--CHHH-----------h
Confidence            57899998 999999999999887  4899999998888876666655321 12233332 2  2222           2


Q ss_pred             CCeeEEEEcCCCCCCCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccc
Q 025509           78 HQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGH  144 (251)
Q Consensus        78 g~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~  144 (251)
                      ...|++|..+|....+. ++.   .+.+..|..    +++...+.+.+.    ++.+.++++|-...
T Consensus        66 ~~aD~Vii~ag~~~~~g-~~r---~dl~~~n~~----i~~~i~~~i~~~----~p~a~iiv~tNPv~  120 (310)
T 2xxj_A           66 EGARAVVLAAGVAQRPG-ETR---LQLLDRNAQ----VFAQVVPRVLEA----APEAVLLVATNPVD  120 (310)
T ss_dssp             TTEEEEEECCCCCCCTT-CCH---HHHHHHHHH----HHHHHHHHHHHH----CTTCEEEECSSSHH
T ss_pred             CCCCEEEECCCCCCCCC-cCH---HHHHHhhHH----HHHHHHHHHHHH----CCCcEEEEecCchH
Confidence            37999999999754322 121   223444433    445555555554    35788888876443

>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1

Probab=97.15  E-value=0.0023  Score=55.17  Aligned_cols=72  Identities=15%  Similarity=0.238  Sum_probs=51.9

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      ++|||+|+ |++|...++.+...|++|+.+++++++.+.+.+ +     +...   ..|..+.+.++    ++.   +++
T Consensus       196 ~~VlV~Ga-G~vG~~aiqlak~~Ga~Vi~~~~~~~~~~~a~~-l-----Ga~~---vi~~~~~~~~~----~~~---~g~  258 (369)
T 1uuf_A          196 KKVGVVGI-GGLGHMGIKLAHAMGAHVVAFTTSEAKREAAKA-L-----GADE---VVNSRNADEMA----AHL---KSF  258 (369)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHH-H-----TCSE---EEETTCHHHHH----TTT---TCE
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-c-----CCcE---EeccccHHHHH----Hhh---cCC
Confidence            36999997 899999999888899999999999887765543 3     3322   23555544332    222   479


Q ss_pred             eEEEEcCCC
Q 025509           81 NILINNAGI   89 (251)
Q Consensus        81 d~lv~~ag~   89 (251)
                      |++|.++|.
T Consensus       259 Dvvid~~g~  267 (369)
T 1uuf_A          259 DFILNTVAA  267 (369)
T ss_dssp             EEEEECCSS
T ss_pred             CEEEECCCC
Confidence            999999984

>4h7p_A Malate dehydrogenase; ssgcid, structural G seattle structural genomics center for infectious disease, oxidoreductase; 1.30A {Leishmania major}

Probab=97.13  E-value=0.012  Score=50.26  Aligned_cols=118  Identities=13%  Similarity=0.088  Sum_probs=70.7

Q ss_pred             EEEEECCCChhHHHHHHHHHHcCC-------EEEEEecCch--hHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHH
Q 025509            2 DIVITGATSGIGTETARVLALRGV-------HVVMGVRDIA--AGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASE   72 (251)
Q Consensus         2 ~vlItG~s~gIG~a~a~~l~~~G~-------~Vi~~~r~~~--~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~   72 (251)
                      +|.|+||+|+||.+++-.|++...       .+.+.+.++.  .++....++..............+  +..        
T Consensus        26 KVaViGAaG~IG~~la~~la~~~l~~~~~~~eL~L~Di~~~~~~~~Gva~DL~~~~~~~~~~~~~~~--~~~--------   95 (345)
T 4h7p_A           26 KVAVTGAAGQIGYALVPLIARGALLGPTTPVELRLLDIEPALKALAGVEAELEDCAFPLLDKVVVTA--DPR--------   95 (345)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTTCTTEEEEEEES--CHH--------
T ss_pred             EEEEECcCcHHHHHHHHHHHhccccCCCCccEEEEECCCCccccchhhhhhhhhcCccCCCcEEEcC--ChH--------
Confidence            589999999999999999987642       6889998653  345555556553222222222221  211        


Q ss_pred             HHhcCCCeeEEEEcCCCCCCCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCc
Q 025509           73 YNIQHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSE  142 (251)
Q Consensus        73 ~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~  142 (251)
                        +.+...|++|..||....+- ++.   ++.++.|..    +++...+.+.+.+.   +..+|+.+|..
T Consensus        96 --~a~~~advVvi~aG~prkpG-mtR---~DLl~~Na~----I~~~~~~~i~~~a~---~~~~vlvvsNP  152 (345)
T 4h7p_A           96 --VAFDGVAIAIMCGAFPRKAG-MER---KDLLEMNAR----IFKEQGEAIAAVAA---SDCRVVVVGNP  152 (345)
T ss_dssp             --HHTTTCSEEEECCCCCCCTT-CCH---HHHHHHHHH----HHHHHHHHHHHHSC---TTCEEEECSSS
T ss_pred             --HHhCCCCEEEECCCCCCCCC-CCH---HHHHHHhHH----HHHHHHHHHHhhcc---CceEEEEeCCC
Confidence              12347899999999865432 232   344666643    44555566555421   24566666653

>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*

Probab=97.13  E-value=0.00063  Score=60.62  Aligned_cols=41  Identities=20%  Similarity=0.217  Sum_probs=35.8

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHH
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKE   42 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~   42 (251)
                      |+++|||++ +||+++|+.|+..|++|+++++++..+.+...
T Consensus       266 KtVvVtGaG-gIG~aiA~~Laa~GA~Viv~D~~~~~a~~Aa~  306 (488)
T 3ond_A          266 KVAVVAGYG-DVGKGCAAALKQAGARVIVTEIDPICALQATM  306 (488)
T ss_dssp             CEEEEECCS-HHHHHHHHHHHHTTCEEEEECSCHHHHHHHHH
T ss_pred             CEEEEECCC-HHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHH
Confidence            689999988 99999999999999999999998876655543

>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1

Probab=97.13  E-value=0.0016  Score=56.91  Aligned_cols=70  Identities=16%  Similarity=0.348  Sum_probs=51.2

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCC-EEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCC
Q 025509            1 MDIVITGATSGIGTETARVLALRGV-HVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQ   79 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~   79 (251)
                      ++|+|.|+ |++|.++++.|...|+ +|++++|+.+++++..+++     +..  +  .+.   +++.+.+       ..
T Consensus       168 ~~VlIiGa-G~iG~~~a~~l~~~G~~~V~v~~r~~~ra~~la~~~-----g~~--~--~~~---~~l~~~l-------~~  227 (404)
T 1gpj_A          168 KTVLVVGA-GEMGKTVAKSLVDRGVRAVLVANRTYERAVELARDL-----GGE--A--VRF---DELVDHL-------AR  227 (404)
T ss_dssp             CEEEEESC-CHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHHH-----TCE--E--CCG---GGHHHHH-------HT
T ss_pred             CEEEEECh-HHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHc-----CCc--e--ecH---HhHHHHh-------cC
Confidence            57999998 9999999999999999 9999999988776665554     332  1  222   2233322       26


Q ss_pred             eeEEEEcCCCC
Q 025509           80 LNILINNAGIM   90 (251)
Q Consensus        80 id~lv~~ag~~   90 (251)
                      .|+||.+.+..
T Consensus       228 aDvVi~at~~~  238 (404)
T 1gpj_A          228 SDVVVSATAAP  238 (404)
T ss_dssp             CSEEEECCSSS
T ss_pred             CCEEEEccCCC
Confidence            89999998753

>4gsl_A Ubiquitin-like modifier-activating enzyme ATG7; ubiquitin-like protein activation enzyme, ubiquitin-like Pro transfer enzyme, protein transport; 2.70A {Saccharomyces cerevisiae} PDB: 3vh2_A 4gsk_A 3vh1_A

Probab=97.12  E-value=0.0028  Score=57.91  Aligned_cols=87  Identities=11%  Similarity=0.176  Sum_probs=60.0

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCC-EEEEEecCc-------------------hhHHHHHHHHHhhCCCCceEEEEecC
Q 025509            1 MDIVITGATSGIGTETARVLALRGV-HVVMGVRDI-------------------AAGKDVKETIVKEIPSAKVDAMELDL   60 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~-~Vi~~~r~~-------------------~~~~~~~~~~~~~~~~~~v~~~~~D~   60 (251)
                      .+|+|.|+ ||+|.++|+.|+..|. ++.+++.+.                   .+++.+.+.+.+..|...+..+..++
T Consensus       327 arVLIVGa-GGLGs~vA~~La~aGVG~ItLvD~D~Ve~SNL~RQ~L~~~~dIG~~KAeaaa~~L~~iNP~V~v~~~~~~I  405 (615)
T 4gsl_A          327 TKVLLLGA-GTLGCYVSRALIAWGVRKITFVDNGTVSYSNPVRQALYNFEDCGKPKAELAAASLKRIFPLMDATGVKLSI  405 (615)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCEEEEECCCBCCTTGGGTSTTCCGGGTTSBHHHHHHHHHHHHCTTCEEEEECCCC
T ss_pred             CeEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCCCcccCcccccCCChhhcChHHHHHHHHHHHhhCCCcEEEEeeccc
Confidence            36888876 6999999999999998 899998864                   47788888888888877777777655


Q ss_pred             -------CCHHHHHHHHHHHHhcCCCeeEEEEcCC
Q 025509           61 -------SSLASVRNFASEYNIQHHQLNILINNAG   88 (251)
Q Consensus        61 -------~~~~~i~~~~~~~~~~~g~id~lv~~ag   88 (251)
                             ++.+...--.+.+.+.....|+||.+..
T Consensus       406 pm~gh~v~~e~~~~l~~~~l~~ll~~~DlVvd~tD  440 (615)
T 4gsl_A          406 PMIGHKLVNEEAQHKDFDRLRALIKEHDIIFLLVD  440 (615)
T ss_dssp             CCTTCCCSCHHHHHHHHHHHHHHHHHCSEEEECCS
T ss_pred             cccCccccchhhhcCCHHHHHHHhhcCCEEEecCC
Confidence                   2221111001111111236899998875

>3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber}

Probab=97.11  E-value=0.0044  Score=52.29  Aligned_cols=117  Identities=18%  Similarity=0.182  Sum_probs=72.8

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCC--EEEEEecCchhHHHHHHHHHhhCC--CCceEEEEecCCCHHHHHHHHHHHHhc
Q 025509            1 MDIVITGATSGIGTETARVLALRGV--HVVMGVRDIAAGKDVKETIVKEIP--SAKVDAMELDLSSLASVRNFASEYNIQ   76 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~--~Vi~~~r~~~~~~~~~~~~~~~~~--~~~v~~~~~D~~~~~~i~~~~~~~~~~   76 (251)
                      |+|.|+|+ |.+|.+++..|++.|.  .|++.++++++++....++.+..+  ...+.+...|.  .           +.
T Consensus         1 Mkv~ViGa-G~vG~~~a~~l~~~~~~~el~l~D~~~~k~~g~a~DL~~~~~~~~~~~~v~~~~~--~-----------~a   66 (314)
T 3nep_X            1 MKVTVIGA-GNVGATVAECVARQDVAKEVVMVDIKDGMPQGKALDMRESSPIHGFDTRVTGTND--Y-----------GP   66 (314)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCSSEEEEECSSTTHHHHHHHHHHHHHHHHTCCCEEEEESS--S-----------GG
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCchHHHHHHHHHHhccccccCCCcEEEECCC--H-----------HH
Confidence            57899996 9999999999999886  899999999887765555554211  12233332221  1           12


Q ss_pred             CCCeeEEEEcCCCCCCCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCcc
Q 025509           77 HHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEG  143 (251)
Q Consensus        77 ~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~  143 (251)
                      +...|++|.++|....+- ++   -.+.++.|.    .+++...+.+.+.    ++.+.++++|...
T Consensus        67 ~~~aDvVii~ag~~~kpG-~~---R~dl~~~N~----~i~~~i~~~i~~~----~p~a~vivvtNPv  121 (314)
T 3nep_X           67 TEDSDVCIITAGLPRSPG-MS---RDDLLAKNT----EIVGGVTEQFVEG----SPDSTIIVVANPL  121 (314)
T ss_dssp             GTTCSEEEECCCC-----------CHHHHHHHH----HHHHHHHHHHHTT----CTTCEEEECCSSH
T ss_pred             hCCCCEEEECCCCCCCCC-CC---HHHHHHhhH----HHHHHHHHHHHHh----CCCcEEEecCCch
Confidence            347899999999754322 12   223455554    3445555565554    3568888888644

>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A

Probab=97.10  E-value=0.0042  Score=53.14  Aligned_cols=76  Identities=22%  Similarity=0.194  Sum_probs=51.1

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCC-EEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCC--CHHHHHHHHHHHHhcC
Q 025509            1 MDIVITGATSGIGTETARVLALRGV-HVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLS--SLASVRNFASEYNIQH   77 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~--~~~~i~~~~~~~~~~~   77 (251)
                      ++|||+|+ |++|...++.+...|+ +|+.+++++++.+.+. ++     +.. .+  .|..  +.++..+.+.+...  
T Consensus       173 ~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~-~l-----Ga~-~v--i~~~~~~~~~~~~~i~~~~~--  240 (356)
T 1pl8_A          173 HKVLVCGA-GPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAK-EI-----GAD-LV--LQISKESPQEIARKVEGQLG--  240 (356)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHH-HT-----TCS-EE--EECSSCCHHHHHHHHHHHHT--
T ss_pred             CEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHH-Hh-----CCC-EE--EcCcccccchHHHHHHHHhC--
Confidence            37999996 8999999988888899 8999999877655442 22     333 12  3444  23333333333322  


Q ss_pred             CCeeEEEEcCC
Q 025509           78 HQLNILINNAG   88 (251)
Q Consensus        78 g~id~lv~~ag   88 (251)
                      +++|++|.++|
T Consensus       241 ~g~D~vid~~g  251 (356)
T 1pl8_A          241 CKPEVTIECTG  251 (356)
T ss_dssp             SCCSEEEECSC
T ss_pred             CCCCEEEECCC
Confidence            47999999998

>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A

Probab=97.10  E-value=0.0006  Score=54.86  Aligned_cols=71  Identities=17%  Similarity=0.136  Sum_probs=54.5

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      +.++|.|+ |.+|..+++.|.+.|+ |++++++++..+...         ..+.++..|.++.+.+.+.      .....
T Consensus        10 ~~viI~G~-G~~G~~la~~L~~~g~-v~vid~~~~~~~~~~---------~~~~~i~gd~~~~~~l~~a------~i~~a   72 (234)
T 2aef_A           10 RHVVICGW-SESTLECLRELRGSEV-FVLAEDENVRKKVLR---------SGANFVHGDPTRVSDLEKA------NVRGA   72 (234)
T ss_dssp             CEEEEESC-CHHHHHHHHHSTTSEE-EEEESCGGGHHHHHH---------TTCEEEESCTTCHHHHHHT------TCTTC
T ss_pred             CEEEEECC-ChHHHHHHHHHHhCCe-EEEEECCHHHHHHHh---------cCCeEEEcCCCCHHHHHhc------Ccchh
Confidence            46899997 8999999999999999 999999887655432         1377888999998766542      12367


Q ss_pred             eEEEEcCC
Q 025509           81 NILINNAG   88 (251)
Q Consensus        81 d~lv~~ag   88 (251)
                      |.+|.+.+
T Consensus        73 d~vi~~~~   80 (234)
T 2aef_A           73 RAVIVDLE   80 (234)
T ss_dssp             SEEEECCS
T ss_pred             cEEEEcCC
Confidence            88887765

>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*

Probab=97.08  E-value=0.0017  Score=55.96  Aligned_cols=78  Identities=22%  Similarity=0.311  Sum_probs=50.9

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCC-EEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHH-hcCC
Q 025509            1 MDIVITGATSGIGTETARVLALRGV-HVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYN-IQHH   78 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~-~~~g   78 (251)
                      ++|||+|+ |++|...++.+...|+ +|+.+++++++.+.+ +++     +...   ..|.++.+..+. +.+.. ...+
T Consensus       184 ~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a-~~l-----Ga~~---vi~~~~~~~~~~-i~~~~~~~~g  252 (370)
T 4ej6_A          184 STVAILGG-GVIGLLTVQLARLAGATTVILSTRQATKRRLA-EEV-----GATA---TVDPSAGDVVEA-IAGPVGLVPG  252 (370)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCHHHHHHH-HHH-----TCSE---EECTTSSCHHHH-HHSTTSSSTT
T ss_pred             CEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHH-HHc-----CCCE---EECCCCcCHHHH-HHhhhhccCC
Confidence            47999998 8999999998888999 899998887765533 333     3322   235554332222 22210 1234


Q ss_pred             CeeEEEEcCCC
Q 025509           79 QLNILINNAGI   89 (251)
Q Consensus        79 ~id~lv~~ag~   89 (251)
                      ++|+++.++|.
T Consensus       253 g~Dvvid~~G~  263 (370)
T 4ej6_A          253 GVDVVIECAGV  263 (370)
T ss_dssp             CEEEEEECSCC
T ss_pred             CCCEEEECCCC
Confidence            79999999983

>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*

Probab=97.08  E-value=0.0015  Score=56.03  Aligned_cols=73  Identities=18%  Similarity=0.202  Sum_probs=50.7

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      ++|||+|+ |++|...++.+...|++|+.+++++++.+.+.+++     +... +  .|..+.+.+.    +   ..+++
T Consensus       182 ~~VlV~Ga-G~vG~~a~qlak~~Ga~Vi~~~~~~~~~~~~~~~l-----Ga~~-v--i~~~~~~~~~----~---~~~g~  245 (357)
T 2cf5_A          182 LRGGILGL-GGVGHMGVKIAKAMGHHVTVISSSNKKREEALQDL-----GADD-Y--VIGSDQAKMS----E---LADSL  245 (357)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCEEEEEESSTTHHHHHHTTS-----CCSC-E--EETTCHHHHH----H---STTTE
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHc-----CCce-e--eccccHHHHH----H---hcCCC
Confidence            37999985 99999999988888999999999887765543222     3322 1  3444543322    2   22479


Q ss_pred             eEEEEcCCC
Q 025509           81 NILINNAGI   89 (251)
Q Consensus        81 d~lv~~ag~   89 (251)
                      |++|.++|.
T Consensus       246 D~vid~~g~  254 (357)
T 2cf5_A          246 DYVIDTVPV  254 (357)
T ss_dssp             EEEEECCCS
T ss_pred             CEEEECCCC
Confidence            999999984

>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*

Probab=97.06  E-value=0.0015  Score=55.60  Aligned_cols=74  Identities=16%  Similarity=0.129  Sum_probs=51.1

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      ++|||+|+ |++|...++.+...|++|+.+++++++.+.+.+ +     +....   .|..+.+..+.+.+    ..+++
T Consensus       168 ~~VlV~Ga-G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~-l-----Ga~~~---i~~~~~~~~~~~~~----~~g~~  233 (340)
T 3s2e_A          168 QWVVISGI-GGLGHVAVQYARAMGLRVAAVDIDDAKLNLARR-L-----GAEVA---VNARDTDPAAWLQK----EIGGA  233 (340)
T ss_dssp             SEEEEECC-STTHHHHHHHHHHTTCEEEEEESCHHHHHHHHH-T-----TCSEE---EETTTSCHHHHHHH----HHSSE
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHH-c-----CCCEE---EeCCCcCHHHHHHH----hCCCC
Confidence            47899987 899999999888899999999998877664322 2     33222   35544333333322    22489


Q ss_pred             eEEEEcCC
Q 025509           81 NILINNAG   88 (251)
Q Consensus        81 d~lv~~ag   88 (251)
                      |++|.++|
T Consensus       234 d~vid~~g  241 (340)
T 3s2e_A          234 HGVLVTAV  241 (340)
T ss_dssp             EEEEESSC
T ss_pred             CEEEEeCC
Confidence            99999987

>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1

Probab=97.03  E-value=0.0019  Score=55.72  Aligned_cols=77  Identities=9%  Similarity=0.075  Sum_probs=52.6

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCC-EEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCC-HHHHHHHHHHHHhcCC
Q 025509            1 MDIVITGATSGIGTETARVLALRGV-HVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSS-LASVRNFASEYNIQHH   78 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~-~~~i~~~~~~~~~~~g   78 (251)
                      ++|||+|+ |++|...++.+...|+ +|+.+++++++.+.+. ++     +... +  .|..+ .+++.+.+.++..  +
T Consensus       194 ~~VlV~Ga-G~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~-~l-----Ga~~-v--i~~~~~~~~~~~~~~~~~~--~  261 (374)
T 1cdo_A          194 STCAVFGL-GAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAK-VF-----GATD-F--VNPNDHSEPISQVLSKMTN--G  261 (374)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHH-HT-----TCCE-E--ECGGGCSSCHHHHHHHHHT--S
T ss_pred             CEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHH-Hh-----CCce-E--EeccccchhHHHHHHHHhC--C
Confidence            47999995 9999999998888999 8999999888766543 22     3321 1  34442 1234444444433  4


Q ss_pred             CeeEEEEcCCC
Q 025509           79 QLNILINNAGI   89 (251)
Q Consensus        79 ~id~lv~~ag~   89 (251)
                      ++|++|.++|.
T Consensus       262 g~D~vid~~g~  272 (374)
T 1cdo_A          262 GVDFSLECVGN  272 (374)
T ss_dssp             CBSEEEECSCC
T ss_pred             CCCEEEECCCC
Confidence            79999999984

>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*

Probab=97.03  E-value=0.0025  Score=54.95  Aligned_cols=76  Identities=13%  Similarity=0.155  Sum_probs=50.3

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      ++|||+|++|++|...++.+...|++|+.+. ++++.+.+ +++     +...   ..|..+.+ +.+.+.++.  .+++
T Consensus       166 ~~VlV~Ga~G~vG~~a~qla~~~Ga~Vi~~~-~~~~~~~~-~~l-----Ga~~---vi~~~~~~-~~~~v~~~t--~g~~  232 (371)
T 3gqv_A          166 VYVLVYGGSTATATVTMQMLRLSGYIPIATC-SPHNFDLA-KSR-----GAEE---VFDYRAPN-LAQTIRTYT--KNNL  232 (371)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTCEEEEEE-CGGGHHHH-HHT-----TCSE---EEETTSTT-HHHHHHHHT--TTCC
T ss_pred             cEEEEECCCcHHHHHHHHHHHHCCCEEEEEe-CHHHHHHH-HHc-----CCcE---EEECCCch-HHHHHHHHc--cCCc
Confidence            3699999999999999999988999998886 55554432 222     3322   23554433 233233332  2469


Q ss_pred             eEEEEcCCC
Q 025509           81 NILINNAGI   89 (251)
Q Consensus        81 d~lv~~ag~   89 (251)
                      |+++.++|.
T Consensus       233 d~v~d~~g~  241 (371)
T 3gqv_A          233 RYALDCITN  241 (371)
T ss_dssp             CEEEESSCS
T ss_pred             cEEEECCCc
Confidence            999999984

>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*

Probab=97.01  E-value=0.0093  Score=49.37  Aligned_cols=42  Identities=19%  Similarity=0.219  Sum_probs=36.3

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHH
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKET   43 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~   43 (251)
                      ++|.|.|+ |.+|.++|..|++.|++|++.+|+++.++...+.
T Consensus         5 ~kV~VIGa-G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~   46 (283)
T 4e12_A            5 TNVTVLGT-GVLGSQIAFQTAFHGFAVTAYDINTDALDAAKKR   46 (283)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHH
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHH
Confidence            46788875 7899999999999999999999999887776654

>3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum}

Probab=97.01  E-value=0.0037  Score=51.89  Aligned_cols=40  Identities=13%  Similarity=0.116  Sum_probs=35.0

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCC-EEEEEecCchhHHHHH
Q 025509            1 MDIVITGATSGIGTETARVLALRGV-HVVMGVRDIAAGKDVK   41 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~-~Vi~~~r~~~~~~~~~   41 (251)
                      |+++|+|+ ||.|++++..|.+.|+ +|.++.|+.++++++.
T Consensus       123 k~vlvlGa-GGaaraia~~L~~~G~~~v~v~nRt~~ka~~La  163 (282)
T 3fbt_A          123 NICVVLGS-GGAARAVLQYLKDNFAKDIYVVTRNPEKTSEIY  163 (282)
T ss_dssp             SEEEEECS-STTHHHHHHHHHHTTCSEEEEEESCHHHHHHHC
T ss_pred             CEEEEECC-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHH
Confidence            57999997 6999999999999998 8999999988766654

>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A

Probab=97.01  E-value=0.0019  Score=55.36  Aligned_cols=73  Identities=15%  Similarity=0.224  Sum_probs=51.0

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      ++|||+|+ |++|...++.+...|++|+.+++++++.+.+.+ +     +....   .|..+..+   ..+++.   +++
T Consensus       181 ~~VlV~Ga-G~vG~~~~qlak~~Ga~Vi~~~~~~~~~~~~~~-l-----Ga~~v---~~~~~~~~---~~~~~~---~~~  244 (360)
T 1piw_A          181 KKVGIVGL-GGIGSMGTLISKAMGAETYVISRSSRKREDAMK-M-----GADHY---IATLEEGD---WGEKYF---DTF  244 (360)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCEEEEEESSSTTHHHHHH-H-----TCSEE---EEGGGTSC---HHHHSC---SCE
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHH-c-----CCCEE---EcCcCchH---HHHHhh---cCC
Confidence            47999999 999999999888899999999998887665543 3     33222   23333201   122222   479


Q ss_pred             eEEEEcCCC
Q 025509           81 NILINNAGI   89 (251)
Q Consensus        81 d~lv~~ag~   89 (251)
                      |++|.++|.
T Consensus       245 D~vid~~g~  253 (360)
T 1piw_A          245 DLIVVCASS  253 (360)
T ss_dssp             EEEEECCSC
T ss_pred             CEEEECCCC
Confidence            999999985

>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}

Probab=96.98  E-value=0.0081  Score=50.38  Aligned_cols=116  Identities=20%  Similarity=0.200  Sum_probs=64.5

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCC--EEEEEecCchhHHHHHHHHHhhCC-CCceEEEEecCCCHHHHHHHHHHHHhcC
Q 025509            1 MDIVITGATSGIGTETARVLALRGV--HVVMGVRDIAAGKDVKETIVKEIP-SAKVDAMELDLSSLASVRNFASEYNIQH   77 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~--~Vi~~~r~~~~~~~~~~~~~~~~~-~~~v~~~~~D~~~~~~i~~~~~~~~~~~   77 (251)
                      ++|.|+|+ |.+|.+++..|+..|.  +|+++++++++++.....+.+..+ .....+..   .+.+           ..
T Consensus         1 mkI~VIGa-G~vG~~la~~la~~g~~~eV~L~D~~~~~~~~~~~~l~~~~~~~~~~~i~~---~~~~-----------a~   65 (304)
T 2v6b_A            1 MKVGVVGT-GFVGSTAAFALVLRGSCSELVLVDRDEDRAQAEAEDIAHAAPVSHGTRVWH---GGHS-----------EL   65 (304)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHTTSCCTTSCCEEEE---ECGG-----------GG
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHhhhhhhhhcCCeEEEE---CCHH-----------Hh
Confidence            57899998 9999999999999998  899999998776654444433221 01122211   1211           12


Q ss_pred             CCeeEEEEcCCCCCCCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCcc
Q 025509           78 HQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEG  143 (251)
Q Consensus        78 g~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~  143 (251)
                      ...|++|.+++....+. .+   -.+.+..|..-    .+.+.+.+.+.    ++.+.++++|...
T Consensus        66 ~~aDvVIi~~~~~~~~g-~~---r~dl~~~n~~i----~~~i~~~i~~~----~p~~~vi~~tNP~  119 (304)
T 2v6b_A           66 ADAQVVILTAGANQKPG-ES---RLDLLEKNADI----FRELVPQITRA----APDAVLLVTSNPV  119 (304)
T ss_dssp             TTCSEEEECC----------------CHHHHHHH----HHHHHHHHHHH----CSSSEEEECSSSH
T ss_pred             CCCCEEEEcCCCCCCCC-Cc---HHHHHHhHHHH----HHHHHHHHHHh----CCCeEEEEecCch
Confidence            37899999998643221 11   11224444443    34444444443    1456777766544

>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}

Probab=96.96  E-value=0.0074  Score=51.29  Aligned_cols=75  Identities=13%  Similarity=0.151  Sum_probs=50.7

Q ss_pred             CEEEEECCCChhHHHHHHHHHHc--CCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCC
Q 025509            1 MDIVITGATSGIGTETARVLALR--GVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHH   78 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~--G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g   78 (251)
                      ++|||+|+ |++|...++.+...  |++|+.+++++++.+.+. ++     +....   .|..+.   ....+++.. ..
T Consensus       172 ~~VlV~Ga-G~vG~~aiqlak~~~~Ga~Vi~~~~~~~~~~~~~-~l-----Ga~~v---i~~~~~---~~~~~~~~~-g~  237 (344)
T 2h6e_A          172 PVVIVNGI-GGLAVYTIQILKALMKNITIVGISRSKKHRDFAL-EL-----GADYV---SEMKDA---ESLINKLTD-GL  237 (344)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHCTTCEEEEECSCHHHHHHHH-HH-----TCSEE---ECHHHH---HHHHHHHHT-TC
T ss_pred             CEEEEECC-CHHHHHHHHHHHHhcCCCEEEEEeCCHHHHHHHH-Hh-----CCCEE---eccccc---hHHHHHhhc-CC
Confidence            47999999 89999999988888  999999999887765443 23     33221   233220   122334332 23


Q ss_pred             CeeEEEEcCCC
Q 025509           79 QLNILINNAGI   89 (251)
Q Consensus        79 ~id~lv~~ag~   89 (251)
                      ++|++|.++|.
T Consensus       238 g~D~vid~~g~  248 (344)
T 2h6e_A          238 GASIAIDLVGT  248 (344)
T ss_dssp             CEEEEEESSCC
T ss_pred             CccEEEECCCC
Confidence            79999999983

>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*

Probab=96.94  E-value=0.00084  Score=55.68  Aligned_cols=39  Identities=21%  Similarity=0.142  Sum_probs=34.0

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCC-EEEEEecCchhHHHH
Q 025509            1 MDIVITGATSGIGTETARVLALRGV-HVVMGVRDIAAGKDV   40 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~-~Vi~~~r~~~~~~~~   40 (251)
                      |+++|+|+ ||+|++++..|++.|+ +|.++.|+.++++++
T Consensus       118 k~vlvlGa-Gg~g~aia~~L~~~G~~~v~v~~R~~~~a~~l  157 (277)
T 3don_A          118 AYILILGA-GGASKGIANELYKIVRPTLTVANRTMSRFNNW  157 (277)
T ss_dssp             CCEEEECC-SHHHHHHHHHHHTTCCSCCEEECSCGGGGTTC
T ss_pred             CEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHH
Confidence            57999997 7999999999999999 899999998775543

>1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A*

Probab=96.93  E-value=0.048  Score=45.86  Aligned_cols=116  Identities=13%  Similarity=0.156  Sum_probs=72.1

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCC--EEEEEecCchhHHHHHHHHHhhCC--CCceEEEEecCCCHHHHHHHHHHHHhc
Q 025509            1 MDIVITGATSGIGTETARVLALRGV--HVVMGVRDIAAGKDVKETIVKEIP--SAKVDAMELDLSSLASVRNFASEYNIQ   76 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~--~Vi~~~r~~~~~~~~~~~~~~~~~--~~~v~~~~~D~~~~~~i~~~~~~~~~~   76 (251)
                      ++|.|+|+ |.+|.+++..|+..|.  +|++.++++++++.....+.+..+  +..+.+.. |  +.           +.
T Consensus         7 ~kI~IIGa-G~vG~sla~~l~~~~~~~ev~l~Di~~~~~~~~~~dl~~~~~~~~~~~~i~~-~--~~-----------~a   71 (316)
T 1ldn_A            7 ARVVVIGA-GFVGASYVFALMNQGIADEIVLIDANESKAIGDAMDFNHGKVFAPKPVDIWH-G--DY-----------DD   71 (316)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHTTSSSSCCEEEE-C--CG-----------GG
T ss_pred             CEEEEECc-CHHHHHHHHHHHhCCCCCEEEEEeCCcchHHHHHhhHHHHhhhcCCCeEEEc-C--cH-----------HH
Confidence            36899998 9999999999998874  899999998766655555655432  11233332 2  21           12


Q ss_pred             CCCeeEEEEcCCCCCCCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCcc
Q 025509           77 HHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEG  143 (251)
Q Consensus        77 ~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~  143 (251)
                      ....|++|.++|....+.. +..+   .+..|    ..+.+.+.+.+.+.    ++.+.++++|-..
T Consensus        72 l~~aDvViia~~~~~~~g~-~r~d---l~~~n----~~i~~~i~~~i~~~----~p~a~~iv~tNPv  126 (316)
T 1ldn_A           72 CRDADLVVICAGANQKPGE-TRLD---LVDKN----IAIFRSIVESVMAS----GFQGLFLVATNPV  126 (316)
T ss_dssp             TTTCSEEEECCSCCCCTTT-CSGG---GHHHH----HHHHHHHHHHHHHH----TCCSEEEECSSSH
T ss_pred             hCCCCEEEEcCCCCCCCCC-CHHH---HHHcC----hHHHHHHHHHHHHH----CCCCEEEEeCCch
Confidence            3478999999997644322 2222   23344    23445555565554    2456777776543

>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}

Probab=96.92  E-value=0.0019  Score=54.47  Aligned_cols=71  Identities=11%  Similarity=0.201  Sum_probs=48.2

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      ++|||+||+|++|...++.+...|++|+.++++. + .+..+++     +...   ..|..+.+.+.+       ...++
T Consensus       154 ~~vlV~Ga~G~vG~~a~q~a~~~Ga~vi~~~~~~-~-~~~~~~l-----Ga~~---~i~~~~~~~~~~-------~~~g~  216 (321)
T 3tqh_A          154 DVVLIHAGAGGVGHLAIQLAKQKGTTVITTASKR-N-HAFLKAL-----GAEQ---CINYHEEDFLLA-------ISTPV  216 (321)
T ss_dssp             CEEEESSTTSHHHHHHHHHHHHTTCEEEEEECHH-H-HHHHHHH-----TCSE---EEETTTSCHHHH-------CCSCE
T ss_pred             CEEEEEcCCcHHHHHHHHHHHHcCCEEEEEeccc-h-HHHHHHc-----CCCE---EEeCCCcchhhh-------hccCC
Confidence            4799999999999999999999999999887543 3 3333333     3332   234444332221       12479


Q ss_pred             eEEEEcCC
Q 025509           81 NILINNAG   88 (251)
Q Consensus        81 d~lv~~ag   88 (251)
                      |+++.++|
T Consensus       217 D~v~d~~g  224 (321)
T 3tqh_A          217 DAVIDLVG  224 (321)
T ss_dssp             EEEEESSC
T ss_pred             CEEEECCC
Confidence            99999998

>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*

Probab=96.92  E-value=0.0028  Score=54.59  Aligned_cols=77  Identities=10%  Similarity=0.073  Sum_probs=52.5

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCC-EEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCC-HHHHHHHHHHHHhcCC
Q 025509            1 MDIVITGATSGIGTETARVLALRGV-HVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSS-LASVRNFASEYNIQHH   78 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~-~~~i~~~~~~~~~~~g   78 (251)
                      ++|||+|+ |++|...++.+...|+ +|+.+++++++.+.+. ++     +... +  .|..+ .+++.+.+.++..  +
T Consensus       192 ~~VlV~Ga-G~vG~~avqla~~~Ga~~Vi~~~~~~~~~~~~~-~l-----Ga~~-v--i~~~~~~~~~~~~v~~~~~--~  259 (373)
T 2fzw_A          192 SVCAVFGL-GGVGLAVIMGCKVAGASRIIGVDINKDKFARAK-EF-----GATE-C--INPQDFSKPIQEVLIEMTD--G  259 (373)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHH-HH-----TCSE-E--ECGGGCSSCHHHHHHHHTT--S
T ss_pred             CEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHH-Hc-----CCce-E--eccccccccHHHHHHHHhC--C
Confidence            36999995 9999999998888899 8999999888766543 33     3322 1  34432 1234443444332  4


Q ss_pred             CeeEEEEcCCC
Q 025509           79 QLNILINNAGI   89 (251)
Q Consensus        79 ~id~lv~~ag~   89 (251)
                      ++|++|.++|.
T Consensus       260 g~D~vid~~g~  270 (373)
T 2fzw_A          260 GVDYSFECIGN  270 (373)
T ss_dssp             CBSEEEECSCC
T ss_pred             CCCEEEECCCc
Confidence            79999999984

>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}

Probab=96.91  E-value=0.0016  Score=55.66  Aligned_cols=67  Identities=15%  Similarity=0.245  Sum_probs=49.0

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      ++|||+|+ |++|...++.+...|++|+.+++++++.+.+.+ +     +....+     ++.+.+.+          ++
T Consensus       178 ~~VlV~Ga-G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~-l-----Ga~~v~-----~~~~~~~~----------~~  235 (348)
T 3two_A          178 TKVGVAGF-GGLGSMAVKYAVAMGAEVSVFARNEHKKQDALS-M-----GVKHFY-----TDPKQCKE----------EL  235 (348)
T ss_dssp             CEEEEESC-SHHHHHHHHHHHHTTCEEEEECSSSTTHHHHHH-T-----TCSEEE-----SSGGGCCS----------CE
T ss_pred             CEEEEECC-cHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHh-c-----CCCeec-----CCHHHHhc----------CC
Confidence            47999997 999999999888899999999999887765432 2     443332     33332211          79


Q ss_pred             eEEEEcCCC
Q 025509           81 NILINNAGI   89 (251)
Q Consensus        81 d~lv~~ag~   89 (251)
                      |+++.++|.
T Consensus       236 D~vid~~g~  244 (348)
T 3two_A          236 DFIISTIPT  244 (348)
T ss_dssp             EEEEECCCS
T ss_pred             CEEEECCCc
Confidence            999999984

>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*

Probab=96.91  E-value=0.021  Score=48.22  Aligned_cols=122  Identities=16%  Similarity=0.095  Sum_probs=70.2

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCC-EEEEEecCchhHHHHHHHHHhhCC--CCceEEEEecCCCHHHHHHHHHHHHhcC
Q 025509            1 MDIVITGATSGIGTETARVLALRGV-HVVMGVRDIAAGKDVKETIVKEIP--SAKVDAMELDLSSLASVRNFASEYNIQH   77 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~--~~~v~~~~~D~~~~~~i~~~~~~~~~~~   77 (251)
                      ++|.|+|+ |.+|..++..|+..|. +|++.++++++++.....+.+...  .....+...  ++.+           ..
T Consensus         5 ~kI~VIGa-G~vG~~ia~~la~~g~~~v~L~Di~~~~l~~~~~~l~~~~~~~~~~~~i~~t--~d~~-----------al   70 (322)
T 1t2d_A            5 AKIVLVGS-GMIGGVMATLIVQKNLGDVVLFDIVKNMPHGKALDTSHTNVMAYSNCKVSGS--NTYD-----------DL   70 (322)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTHHHHHTCCCCEEEE--CCGG-----------GG
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhhhhhcCCCcEEEEC--CCHH-----------Hh
Confidence            36899998 9999999999999998 999999998887765555543210  111111110  1211           12


Q ss_pred             CCeeEEEEcCCCCCCCCcCCchh-hHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccc
Q 025509           78 HQLNILINNAGIMGTPFMLSKDN-IELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGH  144 (251)
Q Consensus        78 g~id~lv~~ag~~~~~~~~~~~~-~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~  144 (251)
                      ...|++|.++|....+.....|. -.+.+..|..    +.+.+.+.+.+.    ++.+.++++|....
T Consensus        71 ~~aD~Vi~a~g~p~k~g~~~qe~~r~dl~~~n~~----i~~~i~~~i~~~----~p~a~iiv~tNP~~  130 (322)
T 1t2d_A           71 AGADVVIVTAGFTKAPGKSDKEWNRDDLLPLNNK----IMIEIGGHIKKN----CPNAFIIVVTNPVD  130 (322)
T ss_dssp             TTCSEEEECCSCSSCTTCCSTTCCGGGGHHHHHH----HHHHHHHHHHHH----CTTSEEEECSSSHH
T ss_pred             CCCCEEEEeCCCCCCCCCCcccccHHHHHHHHHH----HHHHHHHHHHHH----CCCeEEEEecCChH
Confidence            37899999999653322110000 1122333333    344455555444    24567777765443

>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*

Probab=96.90  E-value=0.0023  Score=54.87  Aligned_cols=72  Identities=15%  Similarity=0.190  Sum_probs=49.8

Q ss_pred             CEEEEECCCChhHHHH-HHHH-HHcCCE-EEEEecCch---hHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHH
Q 025509            1 MDIVITGATSGIGTET-ARVL-ALRGVH-VVMGVRDIA---AGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYN   74 (251)
Q Consensus         1 k~vlItG~s~gIG~a~-a~~l-~~~G~~-Vi~~~r~~~---~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~   74 (251)
                      ++|||+|+ |++|... ++.+ ...|++ |+.++++++   +.+.+. ++     +.  ..+  |..+. ++.+ +.++ 
T Consensus       174 ~~VlV~Ga-G~vG~~a~iqla~k~~Ga~~Vi~~~~~~~~~~~~~~~~-~l-----Ga--~~v--~~~~~-~~~~-i~~~-  239 (357)
T 2b5w_A          174 SSAFVLGN-GSLGLLTLAMLKVDDKGYENLYCLGRRDRPDPTIDIIE-EL-----DA--TYV--DSRQT-PVED-VPDV-  239 (357)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHCTTCCCEEEEEECCCSSCHHHHHHH-HT-----TC--EEE--ETTTS-CGGG-HHHH-
T ss_pred             CEEEEECC-CHHHHHHHHHHHHHHcCCcEEEEEeCCcccHHHHHHHH-Hc-----CC--ccc--CCCcc-CHHH-HHHh-
Confidence            37999999 9999999 8777 677996 999999877   655442 22     33  223  55432 2333 4444 


Q ss_pred             hcCCCeeEEEEcCC
Q 025509           75 IQHHQLNILINNAG   88 (251)
Q Consensus        75 ~~~g~id~lv~~ag   88 (251)
                        .+++|++|.++|
T Consensus       240 --~gg~Dvvid~~g  251 (357)
T 2b5w_A          240 --YEQMDFIYEATG  251 (357)
T ss_dssp             --SCCEEEEEECSC
T ss_pred             --CCCCCEEEECCC
Confidence              237999999998

>3iup_A Putative NADPH:quinone oxidoreductase; YP_296108.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE NDP; 1.70A {Ralstonia eutropha}

Probab=96.89  E-value=0.0025  Score=55.15  Aligned_cols=77  Identities=16%  Similarity=0.151  Sum_probs=51.4

Q ss_pred             EEEEEC-CCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            2 DIVITG-ATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         2 ~vlItG-~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      +|||.| |+|++|...++.+...|++|+.+++++++.+.+.+ +     +....   .|..+.+-.+.+.+....  .++
T Consensus       173 ~vlV~gag~G~vG~~a~q~a~~~Ga~Vi~~~~~~~~~~~~~~-l-----Ga~~~---~~~~~~~~~~~v~~~t~~--~g~  241 (379)
T 3iup_A          173 SALVHTAAASNLGQMLNQICLKDGIKLVNIVRKQEQADLLKA-Q-----GAVHV---CNAASPTFMQDLTEALVS--TGA  241 (379)
T ss_dssp             SCEEESSTTSHHHHHHHHHHHHHTCCEEEEESSHHHHHHHHH-T-----TCSCE---EETTSTTHHHHHHHHHHH--HCC
T ss_pred             EEEEECCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHh-C-----CCcEE---EeCCChHHHHHHHHHhcC--CCc
Confidence            588987 99999999999888899999999998877655432 2     33222   244443322222222211  269


Q ss_pred             eEEEEcCCC
Q 025509           81 NILINNAGI   89 (251)
Q Consensus        81 d~lv~~ag~   89 (251)
                      |+++.++|.
T Consensus       242 d~v~d~~g~  250 (379)
T 3iup_A          242 TIAFDATGG  250 (379)
T ss_dssp             CEEEESCEE
T ss_pred             eEEEECCCc
Confidence            999999983

>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}

Probab=96.89  E-value=0.0015  Score=56.51  Aligned_cols=77  Identities=10%  Similarity=0.079  Sum_probs=52.2

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCC-EEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCC-HHHHHHHHHHHHhcCC
Q 025509            1 MDIVITGATSGIGTETARVLALRGV-HVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSS-LASVRNFASEYNIQHH   78 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~-~~~i~~~~~~~~~~~g   78 (251)
                      ++|||+|+ |++|...++.+...|+ +|+.+++++++++.+. ++     +...   ..|..+ .+++.+.+.++..  +
T Consensus       195 ~~VlV~Ga-G~vG~~a~q~a~~~Ga~~Vi~~~~~~~~~~~a~-~l-----Ga~~---vi~~~~~~~~~~~~i~~~~~--g  262 (378)
T 3uko_A          195 SNVAIFGL-GTVGLAVAEGAKTAGASRIIGIDIDSKKYETAK-KF-----GVNE---FVNPKDHDKPIQEVIVDLTD--G  262 (378)
T ss_dssp             CCEEEECC-SHHHHHHHHHHHHHTCSCEEEECSCTTHHHHHH-TT-----TCCE---EECGGGCSSCHHHHHHHHTT--S
T ss_pred             CEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHH-Hc-----CCcE---EEccccCchhHHHHHHHhcC--C
Confidence            36899998 9999999998888899 8999999887766432 22     3322   234432 2334444444432  3


Q ss_pred             CeeEEEEcCCC
Q 025509           79 QLNILINNAGI   89 (251)
Q Consensus        79 ~id~lv~~ag~   89 (251)
                      ++|++|.++|.
T Consensus       263 g~D~vid~~g~  273 (378)
T 3uko_A          263 GVDYSFECIGN  273 (378)
T ss_dssp             CBSEEEECSCC
T ss_pred             CCCEEEECCCC
Confidence            79999999983

>1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1

Probab=96.89  E-value=0.012  Score=49.60  Aligned_cols=116  Identities=14%  Similarity=0.151  Sum_probs=72.2

Q ss_pred             EEEEECCCChhHHHHHHHHHHcCC--EEEEEecCchhHHHHHHHHHhhCC-CCceEEEEecCCCHHHHHHHHHHHHhcCC
Q 025509            2 DIVITGATSGIGTETARVLALRGV--HVVMGVRDIAAGKDVKETIVKEIP-SAKVDAMELDLSSLASVRNFASEYNIQHH   78 (251)
Q Consensus         2 ~vlItG~s~gIG~a~a~~l~~~G~--~Vi~~~r~~~~~~~~~~~~~~~~~-~~~v~~~~~D~~~~~~i~~~~~~~~~~~g   78 (251)
                      +|.|+|+ |.+|.+++..|+..+.  .|++.++++++++.....+.+..+ ...+.+.. |  +.           +.+.
T Consensus         7 KI~IiGa-G~vG~~~a~~l~~~~~~~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~v~~-~--~~-----------~a~~   71 (318)
T 1ez4_A            7 KVVLVGD-GAVGSSYAFAMAQQGIAEEFVIVDVVKDRTKGDALDLEDAQAFTAPKKIYS-G--EY-----------SDCK   71 (318)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHGGGGGSCCCEEEE-C--CG-----------GGGT
T ss_pred             EEEEECC-CHHHHHHHHHHHcCCCCCEEEEEeCCchHHHHHHHHHHHHHHhcCCeEEEE-C--CH-----------HHhC
Confidence            6899998 9999999999998885  899999998888876777765421 12233332 2  21           1234


Q ss_pred             CeeEEEEcCCCCCCCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccc
Q 025509           79 QLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGH  144 (251)
Q Consensus        79 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~  144 (251)
                      ..|++|..+|....+- ++.   .+.+..|.    .+++...+.+.+.    ++.+.++++|-...
T Consensus        72 ~aDvVii~ag~~~~~g-~~R---~dl~~~n~----~i~~~i~~~i~~~----~p~a~iiv~tNPv~  125 (318)
T 1ez4_A           72 DADLVVITAGAPQKPG-ESR---LDLVNKNL----NILSSIVKPVVDS----GFDGIFLVAANPVD  125 (318)
T ss_dssp             TCSEEEECCCC--------------CHHHHH----HHHHHHHHHHHHT----TCCSEEEECSSSHH
T ss_pred             CCCEEEECCCCCCCCC-CCH---HHHHHHHH----HHHHHHHHHHHHh----CCCeEEEEeCCcHH
Confidence            7899999999753321 111   12233343    3445555665554    35788888876443

>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*

Probab=96.88  E-value=0.047  Score=46.28  Aligned_cols=120  Identities=19%  Similarity=0.119  Sum_probs=69.7

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCC-EEEEEecCchhHHHHHHHHHhh---CC-CCceEEEEecCCCHHHHHHHHHHHHh
Q 025509            1 MDIVITGATSGIGTETARVLALRGV-HVVMGVRDIAAGKDVKETIVKE---IP-SAKVDAMELDLSSLASVRNFASEYNI   75 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~-~Vi~~~r~~~~~~~~~~~~~~~---~~-~~~v~~~~~D~~~~~~i~~~~~~~~~   75 (251)
                      ++|.|+|+ |.+|.++|..|+..|+ +|++.++++++++.....+.+.   .. ..++.+ .   +|.+   +.+     
T Consensus        10 ~kI~VIGa-G~vG~~lA~~la~~g~~~V~L~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~-t---~d~~---ea~-----   76 (331)
T 1pzg_A           10 KKVAMIGS-GMIGGTMGYLCALRELADVVLYDVVKGMPEGKALDLSHVTSVVDTNVSVRA-E---YSYE---AAL-----   76 (331)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHHHHHHHHTTCCCCEEE-E---CSHH---HHH-----
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCeEEEEECChhHHHHHHHHHHhhhhccCCCCEEEE-e---CCHH---HHh-----
Confidence            36899998 9999999999999998 9999999988877744444332   11 111221 1   2322   111     


Q ss_pred             cCCCeeEEEEcCCCCCCCCc-CC-chhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccc
Q 025509           76 QHHQLNILINNAGIMGTPFM-LS-KDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGH  144 (251)
Q Consensus        76 ~~g~id~lv~~ag~~~~~~~-~~-~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~  144 (251)
                        ...|++|..+|....+.. .+ .+. .+.+..|..    +.+.+.+.+.+.    ++.+.++++|-...
T Consensus        77 --~~aDiVi~a~g~p~~~g~~~~~~~r-~dl~~~n~~----i~~~i~~~i~~~----~p~a~vi~~tNP~~  136 (331)
T 1pzg_A           77 --TGADCVIVTAGLTKVPGKPDSEWSR-NDLLPFNSK----IIREIGQNIKKY----CPKTFIIVVTNPLD  136 (331)
T ss_dssp             --TTCSEEEECCSCSSCTTCCGGGCCG-GGGHHHHHH----HHHHHHHHHHHH----CTTCEEEECCSSHH
T ss_pred             --CCCCEEEEccCCCCCCCcccCCCCH-HHHHHHHHH----HHHHHHHHHHHH----CCCcEEEEEcCchH
Confidence              268999999986543211 00 011 122344433    334444555443    23567766665443

>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*

Probab=96.87  E-value=0.02  Score=48.14  Aligned_cols=117  Identities=19%  Similarity=0.177  Sum_probs=66.0

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCC-EEEEEecCchhHHHHHHHHHhhCC--CCceEEEEecCCCHHHHHHHHHHHHhcC
Q 025509            1 MDIVITGATSGIGTETARVLALRGV-HVVMGVRDIAAGKDVKETIVKEIP--SAKVDAMELDLSSLASVRNFASEYNIQH   77 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~--~~~v~~~~~D~~~~~~i~~~~~~~~~~~   77 (251)
                      ++|.|+|+ |.+|..++..|+..|. +|+++++++++++.....+.+...  .....+...  ++.+.           +
T Consensus         3 ~kI~VIGa-G~vG~~~a~~la~~g~~~v~L~Di~~~~~~g~~~dl~~~~~~~~~~~~i~~t--~d~~a-----------~   68 (309)
T 1ur5_A            3 KKISIIGA-GFVGSTTAHWLAAKELGDIVLLDIVEGVPQGKALDLYEASPIEGFDVRVTGT--NNYAD-----------T   68 (309)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEE--SCGGG-----------G
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCCccHHHHHHHhHHHhHhhcCCCeEEEEC--CCHHH-----------H
Confidence            36899998 9999999999999996 999999998877765555543210  111111110  12111           2


Q ss_pred             CCeeEEEEcCCCCCCCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCcc
Q 025509           78 HQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEG  143 (251)
Q Consensus        78 g~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~  143 (251)
                      ...|++|.++|....+.. +..   +.+..|.    .+.+.+.+.+.+.    ++.+.++++|-..
T Consensus        69 ~~aD~Vi~a~g~p~~~g~-~r~---dl~~~n~----~i~~~i~~~i~~~----~p~a~vi~~tNPv  122 (309)
T 1ur5_A           69 ANSDVIVVTSGAPRKPGM-SRE---DLIKVNA----DITRACISQAAPL----SPNAVIIMVNNPL  122 (309)
T ss_dssp             TTCSEEEECCCC---------C---HHHHHHH----HHHHHHHHHHGGG----CTTCEEEECCSSH
T ss_pred             CCCCEEEEcCCCCCCCCC-CHH---HHHHHHH----HHHHHHHHHHHhh----CCCeEEEEcCCch
Confidence            378999999997432211 111   1233333    3344455555443    2355666665433

>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...

Probab=96.86  E-value=0.003  Score=54.39  Aligned_cols=77  Identities=10%  Similarity=0.094  Sum_probs=52.3

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCC-EEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCC-HHHHHHHHHHHHhcCC
Q 025509            1 MDIVITGATSGIGTETARVLALRGV-HVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSS-LASVRNFASEYNIQHH   78 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~-~~~i~~~~~~~~~~~g   78 (251)
                      ++|||+|+ |++|..+++.+...|+ +|+.+++++++.+.+. ++     +...   ..|..+ .+++.+.+.++..  +
T Consensus       193 ~~VlV~Ga-G~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~-~l-----Ga~~---vi~~~~~~~~~~~~~~~~~~--~  260 (374)
T 2jhf_A          193 STCAVFGL-GGVGLSVIMGCKAAGAARIIGVDINKDKFAKAK-EV-----GATE---CVNPQDYKKPIQEVLTEMSN--G  260 (374)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHH-HT-----TCSE---EECGGGCSSCHHHHHHHHTT--S
T ss_pred             CEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHH-Hh-----CCce---EecccccchhHHHHHHHHhC--C
Confidence            47999995 9999999998888999 8999999888766543 22     3321   134432 1234444444332  4


Q ss_pred             CeeEEEEcCCC
Q 025509           79 QLNILINNAGI   89 (251)
Q Consensus        79 ~id~lv~~ag~   89 (251)
                      ++|++|.++|.
T Consensus       261 g~D~vid~~g~  271 (374)
T 2jhf_A          261 GVDFSFEVIGR  271 (374)
T ss_dssp             CBSEEEECSCC
T ss_pred             CCcEEEECCCC
Confidence            79999999984

>3vh1_A Ubiquitin-like modifier-activating enzyme ATG7; autophagy, zinc binding, metal binding protein; 3.00A {Saccharomyces cerevisiae} PDB: 3vh2_A

Probab=96.86  E-value=0.0044  Score=56.47  Aligned_cols=58  Identities=16%  Similarity=0.300  Sum_probs=47.3

Q ss_pred             EEEEECCCChhHHHHHHHHHHcCC-EEEEEecC-------------------chhHHHHHHHHHhhCCCCceEEEEecC
Q 025509            2 DIVITGATSGIGTETARVLALRGV-HVVMGVRD-------------------IAAGKDVKETIVKEIPSAKVDAMELDL   60 (251)
Q Consensus         2 ~vlItG~s~gIG~a~a~~l~~~G~-~Vi~~~r~-------------------~~~~~~~~~~~~~~~~~~~v~~~~~D~   60 (251)
                      +|+|.|+ ||+|.++|+.|+..|. ++.+++.+                   ..+++.+.+.+.+..|..++..+..++
T Consensus       329 kVLIVGa-GGLGs~va~~La~aGVG~ItLvD~D~Ve~SNL~RQ~L~~~~DvG~~KAeaaa~~L~~iNP~v~v~~~~~~I  406 (598)
T 3vh1_A          329 KVLLLGA-GTLGCYVSRALIAWGVRKITFVDNGTVSYSNPVRQALYNFEDCGKPKAELAAASLKRIFPLMDATGVKLSI  406 (598)
T ss_dssp             EEEEECC-SHHHHHHHHHHHTTTCCEEEEECCSBCCTTSTTTSTTCCSTTCSSBHHHHHHHHHHHHCTTCEEEEECCCC
T ss_pred             eEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCcccccccccccccchhhcCcHHHHHHHHHHHhHCCCcEEEEEeccc
Confidence            6888875 6999999999999998 89998654                   257888888898888877777777654

>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*

Probab=96.85  E-value=0.0034  Score=54.16  Aligned_cols=77  Identities=13%  Similarity=0.128  Sum_probs=52.0

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCC-EEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCC-HHHHHHHHHHHHhcCC
Q 025509            1 MDIVITGATSGIGTETARVLALRGV-HVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSS-LASVRNFASEYNIQHH   78 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~-~~~i~~~~~~~~~~~g   78 (251)
                      ++|||+|+ |++|...++.+...|+ +|+.+++++++.+.+. ++     +... +  .|..+ .+++.+.+.++..  +
T Consensus       197 ~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~-~l-----Ga~~-v--i~~~~~~~~~~~~v~~~~~--~  264 (376)
T 1e3i_A          197 STCAVFGL-GCVGLSAIIGCKIAGASRIIAIDINGEKFPKAK-AL-----GATD-C--LNPRELDKPVQDVITELTA--G  264 (376)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHH-HT-----TCSE-E--ECGGGCSSCHHHHHHHHHT--S
T ss_pred             CEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHH-Hh-----CCcE-E--EccccccchHHHHHHHHhC--C
Confidence            37999995 9999999998888999 8999999888766543 22     3321 1  34432 1223333444332  3


Q ss_pred             CeeEEEEcCCC
Q 025509           79 QLNILINNAGI   89 (251)
Q Consensus        79 ~id~lv~~ag~   89 (251)
                      ++|++|.++|.
T Consensus       265 g~Dvvid~~G~  275 (376)
T 1e3i_A          265 GVDYSLDCAGT  275 (376)
T ss_dssp             CBSEEEESSCC
T ss_pred             CccEEEECCCC
Confidence            79999999984

>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}

Probab=96.83  E-value=0.0052  Score=53.55  Aligned_cols=77  Identities=17%  Similarity=0.266  Sum_probs=51.3

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCC-EEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCC
Q 025509            1 MDIVITGATSGIGTETARVLALRGV-HVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQ   79 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~   79 (251)
                      ++|||+|+ |++|...++.+...|+ +|+.+++++++.+.+ +++     +...   ..|..+.+..+ .+.++.. ..+
T Consensus       215 ~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~-~~l-----Ga~~---vi~~~~~~~~~-~i~~~t~-g~g  282 (404)
T 3ip1_A          215 DNVVILGG-GPIGLAAVAILKHAGASKVILSEPSEVRRNLA-KEL-----GADH---VIDPTKENFVE-AVLDYTN-GLG  282 (404)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCHHHHHHH-HHH-----TCSE---EECTTTSCHHH-HHHHHTT-TCC
T ss_pred             CEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHH-HHc-----CCCE---EEcCCCCCHHH-HHHHHhC-CCC
Confidence            36999998 8999999988888999 899999988765544 333     3322   13544433222 2233221 226


Q ss_pred             eeEEEEcCCC
Q 025509           80 LNILINNAGI   89 (251)
Q Consensus        80 id~lv~~ag~   89 (251)
                      +|++|.++|.
T Consensus       283 ~D~vid~~g~  292 (404)
T 3ip1_A          283 AKLFLEATGV  292 (404)
T ss_dssp             CSEEEECSSC
T ss_pred             CCEEEECCCC
Confidence            9999999984

>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}

Probab=96.82  E-value=0.028  Score=47.64  Aligned_cols=115  Identities=17%  Similarity=0.188  Sum_probs=68.5

Q ss_pred             EEEEECCCChhHHHHHHHHHHcCC-EEEEEecCchhHHHHHHHHHhhC----CCCceEEEEecCCCHHHHHHHHHHHHhc
Q 025509            2 DIVITGATSGIGTETARVLALRGV-HVVMGVRDIAAGKDVKETIVKEI----PSAKVDAMELDLSSLASVRNFASEYNIQ   76 (251)
Q Consensus         2 ~vlItG~s~gIG~a~a~~l~~~G~-~Vi~~~r~~~~~~~~~~~~~~~~----~~~~v~~~~~D~~~~~~i~~~~~~~~~~   76 (251)
                      +|.|+|+ |.+|.++|..|+..|+ +|++.+++++.++.....+.+..    ...++... .|   .+           .
T Consensus        16 kI~ViGa-G~vG~~iA~~la~~g~~~V~L~Di~~~~l~~~~~~l~~~~~~~~~~~~i~~t-~d---~~-----------a   79 (328)
T 2hjr_A           16 KISIIGA-GQIGSTIALLLGQKDLGDVYMFDIIEGVPQGKALDLNHCMALIGSPAKIFGE-NN---YE-----------Y   79 (328)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSTTHHHHHHHHHHHHHHHHTCCCCEEEE-SC---GG-----------G
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHhHhhccCCCCEEEEC-CC---HH-----------H
Confidence            6889998 9999999999999998 99999999888776443333221    11122211 22   11           1


Q ss_pred             CCCeeEEEEcCCCCCCCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccc
Q 025509           77 HHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGH  144 (251)
Q Consensus        77 ~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~  144 (251)
                      ....|++|.++|....+.. +..+   .+..|.    .+.+.+.+.+.+.    ++.+.++++|....
T Consensus        80 l~~aD~VI~avg~p~k~g~-tr~d---l~~~n~----~i~~~i~~~i~~~----~p~a~viv~tNP~~  135 (328)
T 2hjr_A           80 LQNSDVVIITAGVPRKPNM-TRSD---LLTVNA----KIVGSVAENVGKY----CPNAFVICITNPLD  135 (328)
T ss_dssp             GTTCSEEEECCSCCCCTTC-CSGG---GHHHHH----HHHHHHHHHHHHH----CTTCEEEECCSSHH
T ss_pred             HCCCCEEEEcCCCCCCCCC-chhh---HHhhhH----HHHHHHHHHHHHH----CCCeEEEEecCchH
Confidence            2378999999997543222 2222   223333    3344445555443    23567777665443

>2zqz_A L-LDH, L-lactate dehydrogenase; oxidoreductase, rossmann fold, cytoplasm, glycolysis, NAD, phosphoprotein; 2.50A {Lactobacillus casei} PDB: 2zqy_A 3vkv_A* 1llc_A*

Probab=96.82  E-value=0.02  Score=48.53  Aligned_cols=117  Identities=12%  Similarity=0.181  Sum_probs=73.4

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCC--EEEEEecCchhHHHHHHHHHhhCC-CCceEEEEecCCCHHHHHHHHHHHHhcC
Q 025509            1 MDIVITGATSGIGTETARVLALRGV--HVVMGVRDIAAGKDVKETIVKEIP-SAKVDAMELDLSSLASVRNFASEYNIQH   77 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~--~Vi~~~r~~~~~~~~~~~~~~~~~-~~~v~~~~~D~~~~~~i~~~~~~~~~~~   77 (251)
                      ++|.|+|+ |.+|.+++..|+..+.  .|++.++++++++.....+.+..+ ...+.+.. |  +.++           +
T Consensus        10 ~KI~IiGa-G~vG~~la~~l~~~~~~~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~i~~-~--~~~a-----------~   74 (326)
T 2zqz_A           10 QKVILVGD-GAVGSSYAYAMVLQGIAQEIGIVDIFKDKTKGDAIDLSNALPFTSPKKIYS-A--EYSD-----------A   74 (326)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHTTGGGSCCCEEEE-C--CGGG-----------G
T ss_pred             CEEEEECC-CHHHHHHHHHHHcCCCCCEEEEEeCCchHhHHHHHHHHHHHHhcCCeEEEE-C--CHHH-----------h
Confidence            36899998 9999999999998875  899999998888776666655321 12233332 2  2221           2


Q ss_pred             CCeeEEEEcCCCCCCCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccc
Q 025509           78 HQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGH  144 (251)
Q Consensus        78 g~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~  144 (251)
                      ...|++|..+|....+- ++   -.+.+..|.    .+++...+.+.+.    ++.+.++++|-...
T Consensus        75 ~~aDvVii~ag~~~k~g-~~---R~dl~~~n~----~i~~~i~~~i~~~----~p~a~iiv~tNPv~  129 (326)
T 2zqz_A           75 KDADLVVITAGAPQKPG-ET---RLDLVNKNL----KILKSIVDPIVDS----GFNGIFLVAANPVD  129 (326)
T ss_dssp             GGCSEEEECCCCC------C---HHHHHHHHH----HHHHHHHHHHHHH----TCCSEEEECSSSHH
T ss_pred             CCCCEEEEcCCCCCCCC-CC---HHHHHHHHH----HHHHHHHHHHHHH----CCCeEEEEeCCcHH
Confidence            37899999999753321 12   122344443    3445555555554    35788888876443

>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*

Probab=96.81  E-value=0.033  Score=46.69  Aligned_cols=117  Identities=21%  Similarity=0.113  Sum_probs=69.3

Q ss_pred             CEEEEECCCChhHHHHHHHHHHc--CCEEEEEecCchhHHHHHHHHHhhCC--CCceEEEEecCCCHHHHHHHHHHHHhc
Q 025509            1 MDIVITGATSGIGTETARVLALR--GVHVVMGVRDIAAGKDVKETIVKEIP--SAKVDAMELDLSSLASVRNFASEYNIQ   76 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~--G~~Vi~~~r~~~~~~~~~~~~~~~~~--~~~v~~~~~D~~~~~~i~~~~~~~~~~   76 (251)
                      ++|.|+|+ |.+|.+++..|++.  |++|+++++++++++.....+.+..+  .....+...  ++.++           
T Consensus         1 mkI~VIGa-G~vG~~la~~la~~~~g~~V~l~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~t--~d~~~-----------   66 (310)
T 1guz_A            1 MKITVIGA-GNVGATTAFRLAEKQLARELVLLDVVEGIPQGKALDMYESGPVGLFDTKVTGS--NDYAD-----------   66 (310)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCEEEEE--SCGGG-----------
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChhHHHHHHHhHHhhhhcccCCcEEEEC--CCHHH-----------
Confidence            57899998 99999999999985  78999999998877765433332100  011111110  22211           


Q ss_pred             CCCeeEEEEcCCCCCCCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCcc
Q 025509           77 HHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEG  143 (251)
Q Consensus        77 ~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~  143 (251)
                      ....|++|.+++....+.    ..-.+.+..|..-...+.+.+.++        .+.+.+++++...
T Consensus        67 l~~aDvViiav~~p~~~g----~~r~dl~~~n~~i~~~i~~~i~~~--------~~~~~viv~tNP~  121 (310)
T 1guz_A           67 TANSDIVIITAGLPRKPG----MTREDLLMKNAGIVKEVTDNIMKH--------SKNPIIIVVSNPL  121 (310)
T ss_dssp             GTTCSEEEECCSCCCCTT----CCHHHHHHHHHHHHHHHHHHHHHH--------CSSCEEEECCSSH
T ss_pred             HCCCCEEEEeCCCCCCCC----CCHHHHHHHHHHHHHHHHHHHHHh--------CCCcEEEEEcCch
Confidence            237899999998532211    112344555655444444444444        1357888876544

>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*

Probab=96.81  E-value=0.025  Score=47.66  Aligned_cols=116  Identities=13%  Similarity=0.155  Sum_probs=71.9

Q ss_pred             EEEEECCCChhHHHHHHHHHHcCC--EEEEEecCchhHHHHHHHHHhhCC--CCceEEEEecCCCHHHHHHHHHHHHhcC
Q 025509            2 DIVITGATSGIGTETARVLALRGV--HVVMGVRDIAAGKDVKETIVKEIP--SAKVDAMELDLSSLASVRNFASEYNIQH   77 (251)
Q Consensus         2 ~vlItG~s~gIG~a~a~~l~~~G~--~Vi~~~r~~~~~~~~~~~~~~~~~--~~~v~~~~~D~~~~~~i~~~~~~~~~~~   77 (251)
                      +|.|+|+ |.+|.+++..|+.+|.  .|+++++++++++.....+.+..+  +..+.+.. |  +.+           .+
T Consensus         8 KI~IIGa-G~vG~~la~~l~~~~~~~ei~L~Di~~~~~~g~~~dl~~~~~~~~~~~~v~~-~--~~~-----------a~   72 (317)
T 3d0o_A            8 KVVLIGN-GAVGSSYAFSLVNQSIVDELVIIDLDTEKVRGDVMDLKHATPYSPTTVRVKA-G--EYS-----------DC   72 (317)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHCSCSEEEEECSCHHHHHHHHHHHHHHGGGSSSCCEEEE-C--CGG-----------GG
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChhHhhhhhhhHHhhhhhcCCCeEEEe-C--CHH-----------Hh
Confidence            6899998 9999999999998884  899999998777665555544221  12233332 2  211           12


Q ss_pred             CCeeEEEEcCCCCCCCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccc
Q 025509           78 HQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGH  144 (251)
Q Consensus        78 g~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~  144 (251)
                      ...|++|..+|....+. .+   -.+.+..|.    .+++...+.+.+.    ++.+.++++|....
T Consensus        73 ~~aDvVvi~ag~~~~~g-~~---r~dl~~~n~----~i~~~i~~~i~~~----~p~a~viv~tNPv~  127 (317)
T 3d0o_A           73 HDADLVVICAGAAQKPG-ET---RLDLVSKNL----KIFKSIVGEVMAS----KFDGIFLVATNPVD  127 (317)
T ss_dssp             TTCSEEEECCCCCCCTT-CC---HHHHHHHHH----HHHHHHHHHHHHT----TCCSEEEECSSSHH
T ss_pred             CCCCEEEECCCCCCCCC-Cc---HHHHHHHHH----HHHHHHHHHHHHh----CCCcEEEEecCcHH
Confidence            37899999999754321 12   222344443    3445555555554    25678888765443

>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1

Probab=96.75  E-value=0.026  Score=47.54  Aligned_cols=117  Identities=18%  Similarity=0.219  Sum_probs=69.4

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCC--EEEEEecCchhHHHHHHHHHhhCC-CCceEEEEecCCCHHHHHHHHHHHHhcC
Q 025509            1 MDIVITGATSGIGTETARVLALRGV--HVVMGVRDIAAGKDVKETIVKEIP-SAKVDAMELDLSSLASVRNFASEYNIQH   77 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~--~Vi~~~r~~~~~~~~~~~~~~~~~-~~~v~~~~~D~~~~~~i~~~~~~~~~~~   77 (251)
                      |+|.|+|+ |.+|.+++..|++.|+  +|++.++++++++.....+.+..+ .....+. .  ++.+.           .
T Consensus         1 mkI~VIGa-G~~G~~la~~l~~~g~~~~V~l~D~~~~~~~~~~~~l~~~~~~~~~~~i~-~--~d~~~-----------~   65 (319)
T 1a5z_A            1 MKIGIVGL-GRVGSSTAFALLMKGFAREMVLIDVDKKRAEGDALDLIHGTPFTRRANIY-A--GDYAD-----------L   65 (319)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSCCCEEE-E--CCGGG-----------G
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCeEEEEeCChHHHHHHHHHHHhhhhhcCCcEEE-e--CCHHH-----------h
Confidence            57899998 9999999999999998  999999998877776555443211 0111111 1  22221           1


Q ss_pred             CCeeEEEEcCCCCCCCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccc
Q 025509           78 HQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGH  144 (251)
Q Consensus        78 g~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~  144 (251)
                      ...|++|.+++....+. .+  . .+.+..|..-    .+.+.+.+.+.    .+.+.+++++....
T Consensus        66 ~~aDvViiav~~~~~~g-~~--r-~dl~~~n~~i----~~~i~~~i~~~----~~~~~ii~~tNp~~  120 (319)
T 1a5z_A           66 KGSDVVIVAAGVPQKPG-ET--R-LQLLGRNARV----MKEIARNVSKY----APDSIVIVVTNPVD  120 (319)
T ss_dssp             TTCSEEEECCCCCCCSS-CC--H-HHHHHHHHHH----HHHHHHHHHHH----CTTCEEEECSSSHH
T ss_pred             CCCCEEEEccCCCCCCC-CC--H-HHHHHHHHHH----HHHHHHHHHhh----CCCeEEEEeCCcHH
Confidence            26899999998643221 11  1 1223334333    34444444443    13567777765443

>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A*

Probab=96.75  E-value=0.0037  Score=52.64  Aligned_cols=72  Identities=19%  Similarity=0.275  Sum_probs=50.1

Q ss_pred             EEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCee
Q 025509            2 DIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQLN   81 (251)
Q Consensus         2 ~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~id   81 (251)
                      .|||+|++|++|...++.+...|++|+.+++++++.+.+.+ +     +....+   |..+.+.    ++++  ..+++|
T Consensus       149 ~VlV~Ga~G~vG~~aiqla~~~Ga~Vi~~~~~~~~~~~~~~-l-----Ga~~vi---~~~~~~~----~~~~--~~~~~d  213 (324)
T 3nx4_A          149 EVVVTGASGGVGSTAVALLHKLGYQVAAVSGRESTHGYLKS-L-----GANRIL---SRDEFAE----SRPL--EKQLWA  213 (324)
T ss_dssp             CEEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHHHHHH-H-----TCSEEE---EGGGSSC----CCSS--CCCCEE
T ss_pred             eEEEECCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHh-c-----CCCEEE---ecCCHHH----HHhh--cCCCcc
Confidence            38999999999999999998999999999999887665543 3     433222   2222111    1111  224799


Q ss_pred             EEEEcCC
Q 025509           82 ILINNAG   88 (251)
Q Consensus        82 ~lv~~ag   88 (251)
                      +++.++|
T Consensus       214 ~v~d~~g  220 (324)
T 3nx4_A          214 GAIDTVG  220 (324)
T ss_dssp             EEEESSC
T ss_pred             EEEECCC
Confidence            9999887

>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1

Probab=96.74  E-value=0.012  Score=49.71  Aligned_cols=115  Identities=17%  Similarity=0.124  Sum_probs=65.8

Q ss_pred             EEEEECCCChhHHHHHHHHHHcCC--EEEEEecCchhHHHHHHHHHhhCC-CCceEEEEecCCCHHHHHHHHHHHHhcCC
Q 025509            2 DIVITGATSGIGTETARVLALRGV--HVVMGVRDIAAGKDVKETIVKEIP-SAKVDAMELDLSSLASVRNFASEYNIQHH   78 (251)
Q Consensus         2 ~vlItG~s~gIG~a~a~~l~~~G~--~Vi~~~r~~~~~~~~~~~~~~~~~-~~~v~~~~~D~~~~~~i~~~~~~~~~~~g   78 (251)
                      +|.|+|+ |.+|.+++..|+..|.  +|++.+.++++++.....+.+..+ ...+.+. .  .+           .+.+.
T Consensus         9 KI~IiGa-G~vG~~~a~~l~~~~~~~ev~L~Di~~~~~~g~~~dl~~~~~~~~~~~i~-~--~~-----------~~a~~   73 (318)
T 1y6j_A            9 KVAIIGA-GFVGASAAFTMALRQTANELVLIDVFKEKAIGEAMDINHGLPFMGQMSLY-A--GD-----------YSDVK   73 (318)
T ss_dssp             CEEEECC-SHHHHHHHHHHHHTTCSSEEEEECCC---CCHHHHHHTTSCCCTTCEEEC-----C-----------GGGGT
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChHHHHHHHHHHHHhHHhcCCeEEE-E--CC-----------HHHhC
Confidence            5889998 9999999999999987  899999998776655555544321 1112111 1  11           11234


Q ss_pred             CeeEEEEcCCCCCCCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCcc
Q 025509           79 QLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEG  143 (251)
Q Consensus        79 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~  143 (251)
                      ..|++|.++|....+. .+   -.+.+..|+.-.    +.+.+.+.+.    ++++.++++|...
T Consensus        74 ~aDvVii~~g~p~k~g-~~---r~dl~~~n~~i~----~~i~~~i~~~----~p~a~viv~tNPv  126 (318)
T 1y6j_A           74 DCDVIVVTAGANRKPG-ET---RLDLAKKNVMIA----KEVTQNIMKY----YNHGVILVVSNPV  126 (318)
T ss_dssp             TCSEEEECCCC-------C---HHHHHHHHHHHH----HHHHHHHHHH----CCSCEEEECSSSH
T ss_pred             CCCEEEEcCCCCCCCC-cC---HHHHHHhhHHHH----HHHHHHHHHh----CCCcEEEEecCcH
Confidence            7899999999643221 11   223345554444    4444444443    2467787776543

>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}

Probab=96.74  E-value=0.0094  Score=49.31  Aligned_cols=41  Identities=15%  Similarity=0.161  Sum_probs=36.3

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHH
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVK   41 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~   41 (251)
                      ++|.|.|++|.+|.++++.|++.|++|++.+|++++.+...
T Consensus        12 m~I~iIG~tG~mG~~la~~l~~~g~~V~~~~r~~~~~~~~~   52 (286)
T 3c24_A           12 KTVAILGAGGKMGARITRKIHDSAHHLAAIEIAPEGRDRLQ   52 (286)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHSSSEEEEECCSHHHHHHHH
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHH
Confidence            37899999999999999999999999999999987766654

>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}

Probab=96.73  E-value=0.0022  Score=57.09  Aligned_cols=74  Identities=15%  Similarity=0.207  Sum_probs=58.3

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      |+|+|.|+ |-+|+.+|+.|.++|++|++++++++.++++.+.+       .+.++..|.++++.++++      .-...
T Consensus         4 M~iiI~G~-G~vG~~la~~L~~~~~~v~vId~d~~~~~~~~~~~-------~~~~i~Gd~~~~~~L~~A------gi~~a   69 (461)
T 4g65_A            4 MKIIILGA-GQVGGTLAENLVGENNDITIVDKDGDRLRELQDKY-------DLRVVNGHASHPDVLHEA------GAQDA   69 (461)
T ss_dssp             EEEEEECC-SHHHHHHHHHTCSTTEEEEEEESCHHHHHHHHHHS-------SCEEEESCTTCHHHHHHH------TTTTC
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHhc-------CcEEEEEcCCCHHHHHhc------CCCcC
Confidence            46788876 68999999999999999999999988877665432       578899999998877653      11367


Q ss_pred             eEEEEcCC
Q 025509           81 NILINNAG   88 (251)
Q Consensus        81 d~lv~~ag   88 (251)
                      |++|...+
T Consensus        70 d~~ia~t~   77 (461)
T 4g65_A           70 DMLVAVTN   77 (461)
T ss_dssp             SEEEECCS
T ss_pred             CEEEEEcC
Confidence            88887655

>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*

Probab=96.71  E-value=0.004  Score=54.63  Aligned_cols=56  Identities=20%  Similarity=0.259  Sum_probs=41.9

Q ss_pred             EEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHH
Q 025509            2 DIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASV   66 (251)
Q Consensus         2 ~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i   66 (251)
                      .|+|.|. |-+|..+++.|.+.|+.|++++++++..+.+.+        ..+.++..|.++.+.+
T Consensus         6 ~viIiG~-Gr~G~~va~~L~~~g~~vvvId~d~~~v~~~~~--------~g~~vi~GDat~~~~L   61 (413)
T 3l9w_A            6 RVIIAGF-GRFGQITGRLLLSSGVKMVVLDHDPDHIETLRK--------FGMKVFYGDATRMDLL   61 (413)
T ss_dssp             SEEEECC-SHHHHHHHHHHHHTTCCEEEEECCHHHHHHHHH--------TTCCCEESCTTCHHHH
T ss_pred             eEEEECC-CHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHh--------CCCeEEEcCCCCHHHH
Confidence            5889987 779999999999999999999999887766542        1234455555554443

>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1

Probab=96.71  E-value=0.0073  Score=52.45  Aligned_cols=77  Identities=18%  Similarity=0.213  Sum_probs=51.3

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCC-EEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCC
Q 025509            1 MDIVITGATSGIGTETARVLALRGV-HVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQ   79 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~   79 (251)
                      ++|||+|+ |++|...++.+...|+ +|+.+++++++++.+. ++     +.  .+  +|.++.+.+.+.+.++.. ..+
T Consensus       187 ~~VlV~Ga-G~vG~~aiqlAk~~Ga~~Vi~~~~~~~~~~~a~-~l-----Ga--~~--i~~~~~~~~~~~v~~~t~-g~g  254 (398)
T 1kol_A          187 STVYVAGA-GPVGLAAAASARLLGAAVVIVGDLNPARLAHAK-AQ-----GF--EI--ADLSLDTPLHEQIAALLG-EPE  254 (398)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHH-HT-----TC--EE--EETTSSSCHHHHHHHHHS-SSC
T ss_pred             CEEEEECC-cHHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHH-Hc-----CC--cE--EccCCcchHHHHHHHHhC-CCC
Confidence            47999995 9999999988888899 7899999887765542 22     44  22  355443323333333321 136


Q ss_pred             eeEEEEcCCC
Q 025509           80 LNILINNAGI   89 (251)
Q Consensus        80 id~lv~~ag~   89 (251)
                      +|++|.++|.
T Consensus       255 ~Dvvid~~G~  264 (398)
T 1kol_A          255 VDCAVDAVGF  264 (398)
T ss_dssp             EEEEEECCCT
T ss_pred             CCEEEECCCC
Confidence            9999999985

>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*

Probab=96.70  E-value=0.0042  Score=53.45  Aligned_cols=77  Identities=12%  Similarity=0.075  Sum_probs=51.5

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCC-EEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCC-HHHHHHHHHHHHhcCC
Q 025509            1 MDIVITGATSGIGTETARVLALRGV-HVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSS-LASVRNFASEYNIQHH   78 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~-~~~i~~~~~~~~~~~g   78 (251)
                      ++|||+|+ |+||...++.+...|+ +|+.+++++++.+.+. ++     +... +  .|..+ .+++.+.+.++..  +
T Consensus       193 ~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~-~l-----Ga~~-v--i~~~~~~~~~~~~i~~~t~--g  260 (373)
T 1p0f_A          193 STCAVFGL-GGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAI-EL-----GATE-C--LNPKDYDKPIYEVICEKTN--G  260 (373)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHH-HT-----TCSE-E--ECGGGCSSCHHHHHHHHTT--S
T ss_pred             CEEEEECC-CHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHH-Hc-----CCcE-E--EecccccchHHHHHHHHhC--C
Confidence            37999995 9999999988888899 8999999888766543 22     3322 1  24332 1223333344322  4


Q ss_pred             CeeEEEEcCCC
Q 025509           79 QLNILINNAGI   89 (251)
Q Consensus        79 ~id~lv~~ag~   89 (251)
                      ++|++|.++|.
T Consensus       261 g~Dvvid~~g~  271 (373)
T 1p0f_A          261 GVDYAVECAGR  271 (373)
T ss_dssp             CBSEEEECSCC
T ss_pred             CCCEEEECCCC
Confidence            79999999984

>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A

Probab=96.65  E-value=0.034  Score=46.71  Aligned_cols=117  Identities=17%  Similarity=0.192  Sum_probs=67.9

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCC-EEEEEecCchhHHHHHHHHHhhC----CCCceEEEEecCCCHHHHHHHHHHHHh
Q 025509            1 MDIVITGATSGIGTETARVLALRGV-HVVMGVRDIAAGKDVKETIVKEI----PSAKVDAMELDLSSLASVRNFASEYNI   75 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~-~Vi~~~r~~~~~~~~~~~~~~~~----~~~~v~~~~~D~~~~~~i~~~~~~~~~   75 (251)
                      ++|.|+|+ |.+|.++|..|++.|+ +|++.+++++.++.....+....    ....+...    ++.+           
T Consensus         5 ~kI~VIGa-G~~G~~ia~~la~~g~~~V~l~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~t----~d~~-----------   68 (317)
T 2ewd_A            5 RKIAVIGS-GQIGGNIAYIVGKDNLADVVLFDIAEGIPQGKALDITHSMVMFGSTSKVIGT----DDYA-----------   68 (317)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHHHHHHHHHTCCCCEEEE----SCGG-----------
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCceEEEEeCCchHHHHHHHHHHhhhhhcCCCcEEEEC----CCHH-----------
Confidence            36899998 9999999999999998 99999999877766432222210    01122211    1211           


Q ss_pred             cCCCeeEEEEcCCCCCCCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCcccc
Q 025509           76 QHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHR  145 (251)
Q Consensus        76 ~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~  145 (251)
                      .....|++|.++|....+. ++..+.   +..|.    .+.+.+.+.+.+.    .+.+.++++|.....
T Consensus        69 a~~~aDiVi~avg~p~~~g-~~r~d~---~~~~~----~i~~~i~~~i~~~----~~~~iii~~sNp~~~  126 (317)
T 2ewd_A           69 DISGSDVVIITASIPGRPK-DDRSEL---LFGNA----RILDSVAEGVKKY----CPNAFVICITNPLDV  126 (317)
T ss_dssp             GGTTCSEEEECCCCSSCCS-SCGGGG---HHHHH----HHHHHHHHHHHHH----CTTSEEEECCSSHHH
T ss_pred             HhCCCCEEEEeCCCCCCCC-CcHHHH---HHhhH----HHHHHHHHHHHHH----CCCcEEEEeCChHHH
Confidence            1136899999999754332 222221   22222    2334444444443    135667777765443

>1tt5_B Ubiquitin-activating enzyme E1C isoform 1; cell cycle, ligase; 2.60A {Homo sapiens} SCOP: c.111.1.2 PDB: 3dbl_B 3dbr_B 3dbh_B 3gzn_B* 1yov_B 1r4m_B 1r4n_B*

Probab=96.64  E-value=0.0057  Score=53.93  Aligned_cols=59  Identities=22%  Similarity=0.343  Sum_probs=46.0

Q ss_pred             EEEEECCCChhHHHHHHHHHHcCC-EEEEEecCc-------------------hhHHHHHHHHHhhCCCCceEEEEecCC
Q 025509            2 DIVITGATSGIGTETARVLALRGV-HVVMGVRDI-------------------AAGKDVKETIVKEIPSAKVDAMELDLS   61 (251)
Q Consensus         2 ~vlItG~s~gIG~a~a~~l~~~G~-~Vi~~~r~~-------------------~~~~~~~~~~~~~~~~~~v~~~~~D~~   61 (251)
                      +|+|.|+ ||+|.++++.|+..|. ++.+++.+.                   .+++.+.+.+.+..|...+..+..++.
T Consensus        42 ~VlvvG~-GGlGs~va~~La~aGvg~i~ivD~D~Ve~sNL~RQ~l~~~~diG~~Ka~~a~~~l~~lnp~v~v~~~~~~i~  120 (434)
T 1tt5_B           42 KVLVIGA-GGLGCELLKNLALSGFRQIHVIDMDTIDVSNLNRQFLFRPKDIGRPKAEVAAEFLNDRVPNCNVVPHFNKIQ  120 (434)
T ss_dssp             CEEEECS-STHHHHHHHHHHHTTCCCEEEEECCBCCGGGTTTCTTCCGGGTTSBHHHHHHHHHHHHSTTCCCEEEESCGG
T ss_pred             EEEEECc-CHHHHHHHHHHHHcCCCEEEEEcCCEechhccCCCcCCChhHcCcHHHHHHHHHHHhhCCCCEEEEEecccc
Confidence            5888886 8999999999999998 788886431                   467777888888777777777665554

>2d4a_B Malate dehydrogenase; archaea, hyperthermophIle, oxidoreductase; 2.87A {Aeropyrum pernix}

Probab=96.60  E-value=0.049  Score=45.69  Aligned_cols=117  Identities=17%  Similarity=0.216  Sum_probs=72.2

Q ss_pred             EEEEECCCChhHHHHHHHHHHcCC-EEEEEecCchhHHHHHHHHHhhC--CCCceEEEEecCCCHHHHHHHHHHHHhcCC
Q 025509            2 DIVITGATSGIGTETARVLALRGV-HVVMGVRDIAAGKDVKETIVKEI--PSAKVDAMELDLSSLASVRNFASEYNIQHH   78 (251)
Q Consensus         2 ~vlItG~s~gIG~a~a~~l~~~G~-~Vi~~~r~~~~~~~~~~~~~~~~--~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g   78 (251)
                      +|.|+|+ |.+|.+++..|+..|. .|++.++++++++....++.+..  ......+...  .+.+           .+.
T Consensus         1 KI~IiGa-G~vG~~~a~~l~~~~l~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~~i~~t--~d~~-----------a~~   66 (308)
T 2d4a_B            1 MITILGA-GKVGMATAVMLMMRGYDDLLLIARTPGKPQGEALDLAHAAAELGVDIRISGS--NSYE-----------DMR   66 (308)
T ss_dssp             CEEEECC-SHHHHHHHHHHHHHTCSCEEEECSSTTHHHHHHHHHHHHHHHHTCCCCEEEE--SCGG-----------GGT
T ss_pred             CEEEECc-CHHHHHHHHHHHhCCCCEEEEEcCChhhHHHHHHHHHHhhhhcCCCeEEEEC--CCHH-----------HhC
Confidence            3788998 9999999999998887 69999999888776555554421  0112222221  1211           123


Q ss_pred             CeeEEEEcCCCCCCCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccc
Q 025509           79 QLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGH  144 (251)
Q Consensus        79 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~  144 (251)
                      ..|++|..+|....+- ++..   +.+..|.    .+.+...+.+.+.    ++.+.++++|....
T Consensus        67 ~aD~Vi~~ag~~~k~G-~~r~---dl~~~n~----~i~~~i~~~i~~~----~p~a~iiv~tNPv~  120 (308)
T 2d4a_B           67 GSDIVLVTAGIGRKPG-MTRE---QLLEANA----NTMADLAEKIKAY----AKDAIVVITTNPVD  120 (308)
T ss_dssp             TCSEEEECCSCCCCSS-CCTH---HHHHHHH----HHHHHHHHHHHHH----CTTCEEEECCSSHH
T ss_pred             CCCEEEEeCCCCCCCC-CcHH---HHHHHHH----HHHHHHHHHHHHH----CCCeEEEEeCCchH
Confidence            7899999999754332 2222   2233343    3455555555554    25678888876443

>1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A

Probab=96.60  E-value=0.0034  Score=53.72  Aligned_cols=36  Identities=22%  Similarity=0.386  Sum_probs=30.0

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchh
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAA   36 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~   36 (251)
                      ++|||+||+|++|...++.+...|++|+.+.++.++
T Consensus       169 ~~VlV~Ga~G~vG~~aiqlak~~Ga~vi~~~~~~~~  204 (357)
T 1zsy_A          169 DSVIQNASNSGVGQAVIQIAAALGLRTINVVRDRPD  204 (357)
T ss_dssp             CEEEESSTTSHHHHHHHHHHHHHTCEEEEEECCCSC
T ss_pred             CEEEEeCCcCHHHHHHHHHHHHcCCEEEEEecCccc
Confidence            479999999999999998887889998887765443

>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}

Probab=96.60  E-value=0.0087  Score=52.00  Aligned_cols=77  Identities=19%  Similarity=0.255  Sum_probs=50.6

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCC-EEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCC
Q 025509            1 MDIVITGATSGIGTETARVLALRGV-HVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQ   79 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~   79 (251)
                      ++|||+|+ |++|...++.+...|+ +|+.+++++++.+.+. +    . +.  .+  +|..+.+.+.+.+.++.. ..+
T Consensus       187 ~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~-~----l-Ga--~~--i~~~~~~~~~~~~~~~~~-g~g  254 (398)
T 2dph_A          187 SHVYIAGA-GPVGRCAAAGARLLGAACVIVGDQNPERLKLLS-D----A-GF--ET--IDLRNSAPLRDQIDQILG-KPE  254 (398)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHH-T----T-TC--EE--EETTSSSCHHHHHHHHHS-SSC
T ss_pred             CEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHH-H----c-CC--cE--EcCCCcchHHHHHHHHhC-CCC
Confidence            37999996 9999999988888899 8999999887655432 1    2 33  33  355442221222222221 126


Q ss_pred             eeEEEEcCCC
Q 025509           80 LNILINNAGI   89 (251)
Q Consensus        80 id~lv~~ag~   89 (251)
                      +|++|.++|.
T Consensus       255 ~Dvvid~~g~  264 (398)
T 2dph_A          255 VDCGVDAVGF  264 (398)
T ss_dssp             EEEEEECSCT
T ss_pred             CCEEEECCCC
Confidence            9999999984

>1y8q_B Anthracycline-, ubiquitin-like 2 activating enzyme E1B; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_B* 3kyc_B* 3kyd_B* 2px9_A

Probab=96.58  E-value=0.0074  Score=55.58  Aligned_cols=79  Identities=24%  Similarity=0.360  Sum_probs=56.8

Q ss_pred             EEEEECCCChhHHHHHHHHHHcCC-EEEEEecCc-------------------hhHHHHHHHHHhhCCCCceEEEEecCC
Q 025509            2 DIVITGATSGIGTETARVLALRGV-HVVMGVRDI-------------------AAGKDVKETIVKEIPSAKVDAMELDLS   61 (251)
Q Consensus         2 ~vlItG~s~gIG~a~a~~l~~~G~-~Vi~~~r~~-------------------~~~~~~~~~~~~~~~~~~v~~~~~D~~   61 (251)
                      +|+|.|+ ||+|.++++.|+..|. ++.+++.+.                   .+++-+.+.+.+..|...+..+..+++
T Consensus        19 ~VlVVGa-GGLGsevak~La~aGVG~ItlvD~D~Ve~SNLnRQflf~~~dVGk~KAeaaa~~L~~iNP~v~V~a~~~~i~   97 (640)
T 1y8q_B           19 RVLVVGA-GGIGCELLKNLVLTGFSHIDLIDLDTIDVSNLNRQFLFQKKHVGRSKAQVAKESVLQFYPKANIVAYHDSIM   97 (640)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHTCCEEEEEECCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHTTCTTCEEEEEESCTT
T ss_pred             eEEEECc-CHHHHHHHHHHHHcCCCeEEEecCCEEChhhcCCCcCCChhHcChHHHHHHHHHHHHHCCCCeEEEEecccc
Confidence            6888886 8999999999999998 899988653                   345666777777777777888887775


Q ss_pred             CHHHHHHHHHHHHhcCCCeeEEEEcCC
Q 025509           62 SLASVRNFASEYNIQHHQLNILINNAG   88 (251)
Q Consensus        62 ~~~~i~~~~~~~~~~~g~id~lv~~ag   88 (251)
                      .......++       .++|+||.+..
T Consensus        98 ~~~~~~~~~-------~~~DlVvda~D  117 (640)
T 1y8q_B           98 NPDYNVEFF-------RQFILVMNALD  117 (640)
T ss_dssp             STTSCHHHH-------TTCSEEEECCS
T ss_pred             hhhhhHhhh-------cCCCEEEECCC
Confidence            422111111       36788888753

>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1

Probab=96.57  E-value=0.0096  Score=51.17  Aligned_cols=76  Identities=13%  Similarity=0.097  Sum_probs=49.7

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCC-EEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCC
Q 025509            1 MDIVITGATSGIGTETARVLALRGV-HVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQ   79 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~   79 (251)
                      ++|||+|+ |++|...++.+...|+ +|+.+++++++.+.+. ++     +... +  .|..+.+ +.+.+.++.  .++
T Consensus       192 ~~VlV~Ga-G~vG~~a~qlak~~Ga~~Vi~~~~~~~~~~~a~-~l-----Ga~~-v--i~~~~~~-~~~~~~~~~--~gg  258 (371)
T 1f8f_A          192 SSFVTWGA-GAVGLSALLAAKVCGASIIIAVDIVESRLELAK-QL-----GATH-V--INSKTQD-PVAAIKEIT--DGG  258 (371)
T ss_dssp             CEEEEESC-SHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHH-HH-----TCSE-E--EETTTSC-HHHHHHHHT--TSC
T ss_pred             CEEEEECC-CHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHH-Hc-----CCCE-E--ecCCccC-HHHHHHHhc--CCC
Confidence            47999995 8999999988888899 6999999877665442 33     3322 1  2443322 222222222  237


Q ss_pred             eeEEEEcCCC
Q 025509           80 LNILINNAGI   89 (251)
Q Consensus        80 id~lv~~ag~   89 (251)
                      +|++|.++|.
T Consensus       259 ~D~vid~~g~  268 (371)
T 1f8f_A          259 VNFALESTGS  268 (371)
T ss_dssp             EEEEEECSCC
T ss_pred             CcEEEECCCC
Confidence            9999999983

>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*

Probab=96.50  E-value=0.036  Score=46.14  Aligned_cols=40  Identities=23%  Similarity=0.222  Sum_probs=34.9

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHH
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVK   41 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~   41 (251)
                      ++|.|.|+ |.+|.++|..|++.|++|++.+|+++.++...
T Consensus        16 ~~I~VIG~-G~mG~~iA~~la~~G~~V~~~d~~~~~~~~~~   55 (302)
T 1f0y_A           16 KHVTVIGG-GLMGAGIAQVAAATGHTVVLVDQTEDILAKSK   55 (302)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHH
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHH
Confidence            46888987 89999999999999999999999988776643

>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*

Probab=96.50  E-value=0.009  Score=52.14  Aligned_cols=39  Identities=15%  Similarity=0.081  Sum_probs=34.5

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHH
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDV   40 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~   40 (251)
                      ++|+|+|+ |.+|.++++.+...|++|+++++++.+++.+
T Consensus       173 ~~V~ViGa-G~iG~~aa~~a~~~Ga~V~v~D~~~~~~~~~  211 (401)
T 1x13_A          173 AKVMVIGA-GVAGLAAIGAANSLGAIVRAFDTRPEVKEQV  211 (401)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCGGGHHHH
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCCHHHHHHH
Confidence            46899996 8999999999999999999999998876664

>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6

Probab=96.50  E-value=0.0092  Score=49.79  Aligned_cols=79  Identities=18%  Similarity=0.132  Sum_probs=51.4

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      ++|.|.||.|.+|.+++..|.+.|++|++++|++..  +..+    .....++.++.+-..   .+..+++++.....+=
T Consensus        22 ~~I~iIGg~G~mG~~la~~l~~~G~~V~~~~~~~~~--~~~~----~~~~aDvVilavp~~---~~~~vl~~l~~~l~~~   92 (298)
T 2pv7_A           22 HKIVIVGGYGKLGGLFARYLRASGYPISILDREDWA--VAES----ILANADVVIVSVPIN---LTLETIERLKPYLTEN   92 (298)
T ss_dssp             CCEEEETTTSHHHHHHHHHHHTTTCCEEEECTTCGG--GHHH----HHTTCSEEEECSCGG---GHHHHHHHHGGGCCTT
T ss_pred             CEEEEEcCCCHHHHHHHHHHHhCCCeEEEEECCccc--CHHH----HhcCCCEEEEeCCHH---HHHHHHHHHHhhcCCC
Confidence            368999999999999999999999999999998653  1111    112455666654333   3566666665433221


Q ss_pred             eEEEEcCC
Q 025509           81 NILINNAG   88 (251)
Q Consensus        81 d~lv~~ag   88 (251)
                      .+|+..++
T Consensus        93 ~iv~~~~s  100 (298)
T 2pv7_A           93 MLLADLTS  100 (298)
T ss_dssp             SEEEECCS
T ss_pred             cEEEECCC
Confidence            25555544

>1p9l_A Dihydrodipicolinate reductase; oxidoreductase, lysine biosynthesis, NADH binding specificity, TB structural genomics consortium; HET: NAD PDC PG4; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.3 d.81.1.3 PDB: 1c3v_A* 1yl5_A 1yl7_A* 1yl6_A*

Probab=96.46  E-value=0.014  Score=47.41  Aligned_cols=78  Identities=13%  Similarity=0.167  Sum_probs=56.1

Q ss_pred             CEEEEECCCChhHHHHHHHHHHc-CCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCC
Q 025509            1 MDIVITGATSGIGTETARVLALR-GVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQ   79 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~-G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~   79 (251)
                      ++|.|.|++|.+|+.+++.+.+. |+.|+.+....+.+++..    ..    ... +.+|++.++.....+....+.  +
T Consensus         1 mkV~V~Ga~G~mG~~i~~~~~~~~~~elva~~d~~~dl~~~~----~~----~~D-vvIDfT~p~a~~~~~~~a~~~--g   69 (245)
T 1p9l_A            1 MRVGVLGAKGKVGTTMVRAVAAADDLTLSAELDAGDPLSLLT----DG----NTE-VVIDFTHPDVVMGNLEFLIDN--G   69 (245)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHCTTCEEEEEECTTCCTHHHH----HT----TCC-EEEECSCTTTHHHHHHHHHHT--T
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEccCCCHHHHh----cc----CCc-EEEEccChHHHHHHHHHHHHc--C
Confidence            47899999999999999998865 888875554333333322    11    233 567999999998888776554  6


Q ss_pred             eeEEEEcCCC
Q 025509           80 LNILINNAGI   89 (251)
Q Consensus        80 id~lv~~ag~   89 (251)
                      +++|+...|+
T Consensus        70 ~~~VigTTG~   79 (245)
T 1p9l_A           70 IHAVVGTTGF   79 (245)
T ss_dssp             CEEEECCCCC
T ss_pred             CCEEEcCCCC
Confidence            8889888874

>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}

Probab=96.46  E-value=0.019  Score=49.60  Aligned_cols=41  Identities=10%  Similarity=0.054  Sum_probs=35.8

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHH
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKE   42 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~   42 (251)
                      ++|+|+|+ |.+|..+++.+...|++|++.+|+..+++.+.+
T Consensus       185 ~kV~ViG~-G~iG~~aa~~a~~lGa~V~v~D~~~~~l~~~~~  225 (381)
T 3p2y_A          185 ASALVLGV-GVAGLQALATAKRLGAKTTGYDVRPEVAEQVRS  225 (381)
T ss_dssp             CEEEEESC-SHHHHHHHHHHHHHTCEEEEECSSGGGHHHHHH
T ss_pred             CEEEEECc-hHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH
Confidence            36899998 799999999999999999999999888776643

>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A

Probab=96.40  E-value=0.0084  Score=51.15  Aligned_cols=77  Identities=8%  Similarity=-0.012  Sum_probs=49.7

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCC-EEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCC
Q 025509            1 MDIVITGATSGIGTETARVLALRGV-HVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQ   79 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~   79 (251)
                      ++|||+|+ |++|...++.+...|+ +|+.+++++++.+.+ +++     +...   ..|..+.+..+. +.++.. ..+
T Consensus       168 ~~VlV~Ga-G~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~-~~l-----Ga~~---vi~~~~~~~~~~-v~~~t~-g~g  235 (352)
T 3fpc_A          168 DTVCVIGI-GPVGLMSVAGANHLGAGRIFAVGSRKHCCDIA-LEY-----GATD---IINYKNGDIVEQ-ILKATD-GKG  235 (352)
T ss_dssp             CCEEEECC-SHHHHHHHHHHHTTTCSSEEEECCCHHHHHHH-HHH-----TCCE---EECGGGSCHHHH-HHHHTT-TCC
T ss_pred             CEEEEECC-CHHHHHHHHHHHHcCCcEEEEECCCHHHHHHH-HHh-----CCce---EEcCCCcCHHHH-HHHHcC-CCC
Confidence            36899985 8999999988888899 799999987665433 333     3322   234433322222 222211 126


Q ss_pred             eeEEEEcCCC
Q 025509           80 LNILINNAGI   89 (251)
Q Consensus        80 id~lv~~ag~   89 (251)
                      +|+++.++|.
T Consensus       236 ~D~v~d~~g~  245 (352)
T 3fpc_A          236 VDKVVIAGGD  245 (352)
T ss_dssp             EEEEEECSSC
T ss_pred             CCEEEECCCC
Confidence            9999999984

>1lnq_A MTHK channels, potassium channel related protein; rossman fold, helix bundle, membrane protein; 3.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.2.1.9 d.286.1.1 f.14.1.1 PDB: 3rbz_A

Probab=96.38  E-value=0.0062  Score=51.66  Aligned_cols=70  Identities=19%  Similarity=0.146  Sum_probs=55.2

Q ss_pred             EEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCee
Q 025509            2 DIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQLN   81 (251)
Q Consensus         2 ~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~id   81 (251)
                      .++|.|+ |.+|..+++.|.++|. |++++++++..+ ..+        ..+.++..|.++++.+++.      ...+.|
T Consensus       117 ~viI~G~-G~~g~~l~~~L~~~g~-v~vid~~~~~~~-~~~--------~~~~~i~gd~~~~~~L~~a------~i~~a~  179 (336)
T 1lnq_A          117 HVVICGW-SESTLECLRELRGSEV-FVLAEDENVRKK-VLR--------SGANFVHGDPTRVSDLEKA------NVRGAR  179 (336)
T ss_dssp             EEEEESC-CHHHHHHHTTGGGSCE-EEEESCGGGHHH-HHH--------TTCEEEESCTTSHHHHHHT------CSTTEE
T ss_pred             CEEEECC-cHHHHHHHHHHHhCCc-EEEEeCChhhhh-HHh--------CCcEEEEeCCCCHHHHHhc------Chhhcc
Confidence            6899996 8999999999999999 999999987765 322        3578899999998877643      223678


Q ss_pred             EEEEcCC
Q 025509           82 ILINNAG   88 (251)
Q Consensus        82 ~lv~~ag   88 (251)
                      .+|...+
T Consensus       180 ~vi~~~~  186 (336)
T 1lnq_A          180 AVIVDLE  186 (336)
T ss_dssp             EEEECCS
T ss_pred             EEEEcCC
Confidence            8887764

>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A*

Probab=96.36  E-value=0.0045  Score=52.29  Aligned_cols=74  Identities=22%  Similarity=0.316  Sum_probs=49.4

Q ss_pred             EEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCee
Q 025509            2 DIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQLN   81 (251)
Q Consensus         2 ~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~id   81 (251)
                      +|||+|++|++|...++.+...|++|+.+++++++.+.+. ++     +....   .|..+.+  ...++++  ..+++|
T Consensus       153 ~VlV~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~~~~~~~~~-~l-----Ga~~v---~~~~~~~--~~~~~~~--~~~~~d  219 (330)
T 1tt7_A          153 SVLVTGATGGVGGIAVSMLNKRGYDVVASTGNREAADYLK-QL-----GASEV---ISREDVY--DGTLKAL--SKQQWQ  219 (330)
T ss_dssp             CEEEESTTSHHHHHHHHHHHHHTCCEEEEESSSSTHHHHH-HH-----TCSEE---EEHHHHC--SSCCCSS--CCCCEE
T ss_pred             eEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-Hc-----CCcEE---EECCCch--HHHHHHh--hcCCcc
Confidence            6999999999999999998889999999999877765543 23     33221   2321110  0111111  123699


Q ss_pred             EEEEcCC
Q 025509           82 ILINNAG   88 (251)
Q Consensus        82 ~lv~~ag   88 (251)
                      ++|.++|
T Consensus       220 ~vid~~g  226 (330)
T 1tt7_A          220 GAVDPVG  226 (330)
T ss_dssp             EEEESCC
T ss_pred             EEEECCc
Confidence            9999998

>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*

Probab=96.35  E-value=0.019  Score=48.71  Aligned_cols=76  Identities=14%  Similarity=0.161  Sum_probs=48.8

Q ss_pred             CEEEEECCCChhHHHHHHHHHHc-CCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCC
Q 025509            1 MDIVITGATSGIGTETARVLALR-GVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQ   79 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~-G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~   79 (251)
                      ++|||+|+ |++|...++.+... |++|+.+++++++.+.+.+ +     +.... +  |..+ +..+. +.++.. ..+
T Consensus       173 ~~vlv~Ga-G~vG~~a~qla~~~g~~~Vi~~~~~~~~~~~~~~-l-----Ga~~~-i--~~~~-~~~~~-v~~~t~-g~g  239 (345)
T 3jv7_A          173 STAVVIGV-GGLGHVGIQILRAVSAARVIAVDLDDDRLALARE-V-----GADAA-V--KSGA-GAADA-IRELTG-GQG  239 (345)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHCCCEEEEEESCHHHHHHHHH-T-----TCSEE-E--ECST-THHHH-HHHHHG-GGC
T ss_pred             CEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHH-c-----CCCEE-E--cCCC-cHHHH-HHHHhC-CCC
Confidence            36899997 99999988877766 6799999998877654432 2     33322 2  2222 22222 222221 127


Q ss_pred             eeEEEEcCCC
Q 025509           80 LNILINNAGI   89 (251)
Q Consensus        80 id~lv~~ag~   89 (251)
                      +|+++.++|.
T Consensus       240 ~d~v~d~~G~  249 (345)
T 3jv7_A          240 ATAVFDFVGA  249 (345)
T ss_dssp             EEEEEESSCC
T ss_pred             CeEEEECCCC
Confidence            9999999984

>1y8q_A Ubiquitin-like 1 activating enzyme E1A; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_A* 3kyc_A* 3kyd_A*

Probab=96.34  E-value=0.0087  Score=51.19  Aligned_cols=76  Identities=21%  Similarity=0.289  Sum_probs=54.8

Q ss_pred             EEEEECCCChhHHHHHHHHHHcCC-EEEEEecC-------------------chhHHHHHHHHHhhCCCCceEEEEecCC
Q 025509            2 DIVITGATSGIGTETARVLALRGV-HVVMGVRD-------------------IAAGKDVKETIVKEIPSAKVDAMELDLS   61 (251)
Q Consensus         2 ~vlItG~s~gIG~a~a~~l~~~G~-~Vi~~~r~-------------------~~~~~~~~~~~~~~~~~~~v~~~~~D~~   61 (251)
                      +|+|.|+ ||+|.++++.|+..|. ++.+++.+                   ..+++.+.+.+.+..|...+..+..++.
T Consensus        38 ~VlivG~-GGlG~~ia~~La~~Gvg~itlvD~d~V~~sNL~rq~~~~~~diG~~Ka~~~~~~l~~lnp~v~v~~~~~~~~  116 (346)
T 1y8q_A           38 RVLLVGL-KGLGAEIAKNLILAGVKGLTMLDHEQVTPEDPGAQFLIRTGSVGRNRAEASLERAQNLNPMVDVKVDTEDIE  116 (346)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHTCSEEEEECCCBCCSSCGGGCTTSCSSCTTSBHHHHHHHHHHHTCTTSEEEEECSCGG
T ss_pred             eEEEECC-CHHHHHHHHHHHHcCCCEEEEEECCCcchhhCCCCCccccccCcCCHHHHHHHHHHhHCCCeEEEEEecccC
Confidence            6889885 7999999999999998 88888532                   2467778888888777777777766654


Q ss_pred             CHHHHHHHHHHHHhcCCCeeEEEEcC
Q 025509           62 SLASVRNFASEYNIQHHQLNILINNA   87 (251)
Q Consensus        62 ~~~~i~~~~~~~~~~~g~id~lv~~a   87 (251)
                      +  ....++       ...|+||.+.
T Consensus       117 ~--~~~~~~-------~~~dvVv~~~  133 (346)
T 1y8q_A          117 K--KPESFF-------TQFDAVCLTC  133 (346)
T ss_dssp             G--CCHHHH-------TTCSEEEEES
T ss_pred             c--chHHHh-------cCCCEEEEcC
Confidence            3  111111       2678888764

>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis}

Probab=96.32  E-value=0.0062  Score=51.09  Aligned_cols=66  Identities=8%  Similarity=0.050  Sum_probs=45.3

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      ++|||+|+ |++|...++.+...|++|+.++ ++++.+.+. ++     +.... +  |  |   .+    ++   .+++
T Consensus       144 ~~VlV~Ga-G~vG~~a~qlak~~Ga~Vi~~~-~~~~~~~~~-~l-----Ga~~v-~--~--d---~~----~v---~~g~  200 (315)
T 3goh_A          144 REVLIVGF-GAVNNLLTQMLNNAGYVVDLVS-ASLSQALAA-KR-----GVRHL-Y--R--E---PS----QV---TQKY  200 (315)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCEEEEEC-SSCCHHHHH-HH-----TEEEE-E--S--S---GG----GC---CSCE
T ss_pred             CEEEEECC-CHHHHHHHHHHHHcCCEEEEEE-ChhhHHHHH-Hc-----CCCEE-E--c--C---HH----Hh---CCCc
Confidence            47999999 9999999998888899999999 777665543 23     33222 2  3  2   11    11   3589


Q ss_pred             eEEEEcCCC
Q 025509           81 NILINNAGI   89 (251)
Q Consensus        81 d~lv~~ag~   89 (251)
                      |+++.++|.
T Consensus       201 Dvv~d~~g~  209 (315)
T 3goh_A          201 FAIFDAVNS  209 (315)
T ss_dssp             EEEECC---
T ss_pred             cEEEECCCc
Confidence            999999984

>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima}

Probab=96.25  E-value=0.011  Score=48.16  Aligned_cols=38  Identities=26%  Similarity=0.367  Sum_probs=32.7

Q ss_pred             EEEEECCCChhHHHHHHHHHHcCC-EEEEEecCchhHHHH
Q 025509            2 DIVITGATSGIGTETARVLALRGV-HVVMGVRDIAAGKDV   40 (251)
Q Consensus         2 ~vlItG~s~gIG~a~a~~l~~~G~-~Vi~~~r~~~~~~~~   40 (251)
                      +++|.|+ ||.|++++..|++.|+ +|.++.|+.++++++
T Consensus       110 ~vliiGa-Gg~a~ai~~~L~~~G~~~I~v~nR~~~ka~~l  148 (253)
T 3u62_A          110 PVVVVGA-GGAARAVIYALLQMGVKDIWVVNRTIERAKAL  148 (253)
T ss_dssp             SEEEECC-SHHHHHHHHHHHHTTCCCEEEEESCHHHHHTC
T ss_pred             eEEEECc-HHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHH
Confidence            4788886 8999999999999998 899999998765544

>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}

Probab=96.24  E-value=0.044  Score=44.58  Aligned_cols=85  Identities=16%  Similarity=0.256  Sum_probs=55.1

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCE-EEEEecCchhHHHHHHHHH--------hhCCCCceEEEEecCCCHHHHHHHHH
Q 025509            1 MDIVITGATSGIGTETARVLALRGVH-VVMGVRDIAAGKDVKETIV--------KEIPSAKVDAMELDLSSLASVRNFAS   71 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~-Vi~~~r~~~~~~~~~~~~~--------~~~~~~~v~~~~~D~~~~~~i~~~~~   71 (251)
                      ++|.|.|+ |.+|.+++..|++.|++ |.+.+|++++.+...+.+.        +...+  ..++..=+ ....+..+++
T Consensus        11 m~i~iiG~-G~mG~~~a~~l~~~g~~~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~--~Dvvi~av-~~~~~~~v~~   86 (266)
T 3d1l_A           11 TPIVLIGA-GNLATNLAKALYRKGFRIVQVYSRTEESARELAQKVEAEYTTDLAEVNPY--AKLYIVSL-KDSAFAELLQ   86 (266)
T ss_dssp             CCEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSHHHHHHHHHHTTCEEESCGGGSCSC--CSEEEECC-CHHHHHHHHH
T ss_pred             CeEEEEcC-CHHHHHHHHHHHHCCCeEEEEEeCCHHHHHHHHHHcCCceeCCHHHHhcC--CCEEEEec-CHHHHHHHHH
Confidence            35888986 89999999999999998 8899999888776655421        11112  22222222 3445677777


Q ss_pred             HHHhcCCCeeEEEEcCCC
Q 025509           72 EYNIQHHQLNILINNAGI   89 (251)
Q Consensus        72 ~~~~~~g~id~lv~~ag~   89 (251)
                      ++.....+=.++|++++.
T Consensus        87 ~l~~~~~~~~ivv~~s~~  104 (266)
T 3d1l_A           87 GIVEGKREEALMVHTAGS  104 (266)
T ss_dssp             HHHTTCCTTCEEEECCTT
T ss_pred             HHHhhcCCCcEEEECCCC
Confidence            776543333467777653

>7mdh_A Protein (malate dehydrogenase); chloroplastic malate dehydrogenase (NADP+), activated by LIG chloroplastic malate dehydrogenase; 2.40A {Sorghum bicolor} SCOP: c.2.1.5 d.162.1.1 PDB: 1civ_A*

Probab=96.19  E-value=0.12  Score=44.49  Aligned_cols=118  Identities=11%  Similarity=0.054  Sum_probs=69.4

Q ss_pred             EEEEECCCChhHHHHHHHHHHcCC--E---EEEEecCch----hHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHH
Q 025509            2 DIVITGATSGIGTETARVLALRGV--H---VVMGVRDIA----AGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASE   72 (251)
Q Consensus         2 ~vlItG~s~gIG~a~a~~l~~~G~--~---Vi~~~r~~~----~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~   72 (251)
                      +|.|+||+|.||.+++-.|+..+.  .   |++...+.+    +++....++......- ..-+  .+...         
T Consensus        34 KV~ViGAaG~VG~~la~~l~~~~l~~e~~~l~L~d~d~~~~~~~~~G~amDL~h~~~p~-~~~v--~i~~~---------  101 (375)
T 7mdh_A           34 NIAVSGAAGMISNHLLFKLASGEVFGQDQPIALKLLGSERSFQALEGVAMELEDSLYPL-LREV--SIGID---------  101 (375)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCTT-EEEE--EEESC---------
T ss_pred             EEEEECCCChHHHHHHHHHHcCCcCCCCceeEEEecCccchhhhhHHHHHhHHhhhhhh-cCCc--EEecC---------
Confidence            589999999999999999998764  2   777655433    3555555565532111 1111  11210         


Q ss_pred             HHhcCCCeeEEEEcCCCCCCCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCc
Q 025509           73 YNIQHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSE  142 (251)
Q Consensus        73 ~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~  142 (251)
                      ..+.+...|++|..||....+- ++   -.+.++.|.    .+++...+.+.+..   ++.+.++++|..
T Consensus       102 ~y~~~~daDvVVitag~prkpG-~t---R~DLl~~N~----~I~k~i~~~i~~~a---~p~~ivlVvsNP  160 (375)
T 7mdh_A          102 PYEVFEDVDWALLIGAKPRGPG-ME---RAALLDING----QIFADQGKALNAVA---SKNVKVLVVGNP  160 (375)
T ss_dssp             HHHHTTTCSEEEECCCCCCCTT-CC---HHHHHHHHH----HHHHHHHHHHHHHS---CTTCEEEECSSS
T ss_pred             CHHHhCCCCEEEEcCCCCCCCC-CC---HHHHHHHHH----HHHHHHHHHHHHhc---CCCeEEEEecCc
Confidence            0122347999999999754322 12   344566664    34455555555531   146788888764

>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6

Probab=96.18  E-value=0.04  Score=45.12  Aligned_cols=40  Identities=25%  Similarity=0.230  Sum_probs=34.8

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHH
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVK   41 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~   41 (251)
                      |+|.|.| .|.+|.++++.|.+.|++|++.+|++++.+...
T Consensus         1 m~i~iiG-~G~~G~~~a~~l~~~g~~V~~~~~~~~~~~~~~   40 (279)
T 2f1k_A            1 MKIGVVG-LGLIGASLAGDLRRRGHYLIGVSRQQSTCEKAV   40 (279)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHH
T ss_pred             CEEEEEc-CcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH
Confidence            5788998 699999999999999999999999987766543

>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}

Probab=96.15  E-value=0.017  Score=47.83  Aligned_cols=84  Identities=14%  Similarity=0.127  Sum_probs=55.3

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCC---EEEEEecCchhHHHHHHHH--------HhhCCCCceEEEEecCCCHHHHHHH
Q 025509            1 MDIVITGATSGIGTETARVLALRGV---HVVMGVRDIAAGKDVKETI--------VKEIPSAKVDAMELDLSSLASVRNF   69 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~---~Vi~~~r~~~~~~~~~~~~--------~~~~~~~~v~~~~~D~~~~~~i~~~   69 (251)
                      ++|.|.|+ |-+|.++++.|++.|+   +|++.+|+++++++..+..        .+...+.++.++.+   .++.+..+
T Consensus         4 ~~I~iIG~-G~mG~aia~~l~~~g~~~~~V~v~dr~~~~~~~l~~~~gi~~~~~~~~~~~~aDvVilav---~p~~~~~v   79 (280)
T 3tri_A            4 SNITFIGG-GNMARNIVVGLIANGYDPNRICVTNRSLDKLDFFKEKCGVHTTQDNRQGALNADVVVLAV---KPHQIKMV   79 (280)
T ss_dssp             SCEEEESC-SHHHHHHHHHHHHTTCCGGGEEEECSSSHHHHHHHHTTCCEEESCHHHHHSSCSEEEECS---CGGGHHHH
T ss_pred             CEEEEEcc-cHHHHHHHHHHHHCCCCCCeEEEEeCCHHHHHHHHHHcCCEEeCChHHHHhcCCeEEEEe---CHHHHHHH
Confidence            35788877 8999999999999998   8999999998877766531        12122344555444   34556666


Q ss_pred             HHHHHhc-CCCeeEEEEcCC
Q 025509           70 ASEYNIQ-HHQLNILINNAG   88 (251)
Q Consensus        70 ~~~~~~~-~g~id~lv~~ag   88 (251)
                      ++++... ..+=.++|.+++
T Consensus        80 l~~l~~~~l~~~~iiiS~~a   99 (280)
T 3tri_A           80 CEELKDILSETKILVISLAV   99 (280)
T ss_dssp             HHHHHHHHHTTTCEEEECCT
T ss_pred             HHHHHhhccCCCeEEEEecC
Confidence            6666543 222126776654

>2d5c_A AROE, shikimate 5-dehydrogenase; substrate, dimer, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: SKM; 1.65A {Thermus thermophilus} PDB: 1wxd_A* 2cy0_A* 2ev9_A*

Probab=96.11  E-value=0.01  Score=48.59  Aligned_cols=65  Identities=20%  Similarity=0.268  Sum_probs=47.4

Q ss_pred             EEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCee
Q 025509            2 DIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQLN   81 (251)
Q Consensus         2 ~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~id   81 (251)
                      +++|.|+ |++|+++++.|.+.|++|.+.+|+.++++++.+.+     +..     .  .+.+   +       . ...|
T Consensus       118 ~v~iiG~-G~~g~~~a~~l~~~g~~v~v~~r~~~~~~~l~~~~-----~~~-----~--~~~~---~-------~-~~~D  173 (263)
T 2d5c_A          118 PALVLGA-GGAGRAVAFALREAGLEVWVWNRTPQRALALAEEF-----GLR-----A--VPLE---K-------A-REAR  173 (263)
T ss_dssp             CEEEECC-SHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHH-----TCE-----E--CCGG---G-------G-GGCS
T ss_pred             eEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh-----ccc-----h--hhHh---h-------c-cCCC
Confidence            4788986 77999999999999999999999987777665544     221     1  1211   1       1 2689


Q ss_pred             EEEEcCCCC
Q 025509           82 ILINNAGIM   90 (251)
Q Consensus        82 ~lv~~ag~~   90 (251)
                      +||++.+..
T Consensus       174 ivi~~tp~~  182 (263)
T 2d5c_A          174 LLVNATRVG  182 (263)
T ss_dssp             EEEECSSTT
T ss_pred             EEEEccCCC
Confidence            999999853

>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*

Probab=96.09  E-value=0.11  Score=43.40  Aligned_cols=37  Identities=22%  Similarity=0.333  Sum_probs=33.0

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCC--EEEEEecCchhHH
Q 025509            1 MDIVITGATSGIGTETARVLALRGV--HVVMGVRDIAAGK   38 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~--~Vi~~~r~~~~~~   38 (251)
                      ++|.|.|+ |.+|..++..|++.|+  +|++++|++++++
T Consensus         8 mkI~IiGa-G~vG~~~a~~l~~~g~~~~V~l~d~~~~~~~   46 (319)
T 1lld_A            8 TKLAVIGA-GAVGSTLAFAAAQRGIAREIVLEDIAKERVE   46 (319)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHH
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChhHHH
Confidence            46899998 9999999999999998  9999999876665

>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}

Probab=96.09  E-value=0.028  Score=46.73  Aligned_cols=84  Identities=15%  Similarity=0.128  Sum_probs=58.5

Q ss_pred             EEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHH-------HHhhCCCCceEEEEecCCCHHHHHHHHHHHH
Q 025509            2 DIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKET-------IVKEIPSAKVDAMELDLSSLASVRNFASEYN   74 (251)
Q Consensus         2 ~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~-------~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~   74 (251)
                      +|.|.| .|.+|..+|+.|++.|++|++.+|++++.+.+.+.       ..+...   ..++..=+.+...++.+++.+.
T Consensus        17 ~I~vIG-~G~mG~~~A~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~~~~~~~---aDvvi~~vp~~~~~~~v~~~l~   92 (296)
T 3qha_A           17 KLGYIG-LGNMGAPMATRMTEWPGGVTVYDIRIEAMTPLAEAGATLADSVADVAA---ADLIHITVLDDAQVREVVGELA   92 (296)
T ss_dssp             CEEEEC-CSTTHHHHHHHHTTSTTCEEEECSSTTTSHHHHHTTCEECSSHHHHTT---SSEEEECCSSHHHHHHHHHHHH
T ss_pred             eEEEEC-cCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHCCCEEcCCHHHHHh---CCEEEEECCChHHHHHHHHHHH
Confidence            577886 68999999999999999999999998887765432       222221   3344444556777888887776


Q ss_pred             hcCCCeeEEEEcCCC
Q 025509           75 IQHHQLNILINNAGI   89 (251)
Q Consensus        75 ~~~g~id~lv~~ag~   89 (251)
                      ....+=.++|++...
T Consensus        93 ~~l~~g~ivv~~st~  107 (296)
T 3qha_A           93 GHAKPGTVIAIHSTI  107 (296)
T ss_dssp             TTCCTTCEEEECSCC
T ss_pred             HhcCCCCEEEEeCCC
Confidence            654444567766653

>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}

Probab=96.08  E-value=0.022  Score=49.58  Aligned_cols=39  Identities=23%  Similarity=0.162  Sum_probs=34.5

Q ss_pred             EEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHH
Q 025509            2 DIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVK   41 (251)
Q Consensus         2 ~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~   41 (251)
                      +|+|+|+ |.+|..+++.+...|++|++.++++.+++.+.
T Consensus       192 kV~ViG~-G~iG~~aa~~a~~lGa~V~v~D~~~~~l~~~~  230 (405)
T 4dio_A          192 KIFVMGA-GVAGLQAIATARRLGAVVSATDVRPAAKEQVA  230 (405)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCEEEEECSSTTHHHHHH
T ss_pred             EEEEECC-cHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHH
Confidence            6899998 79999999999999999999999987766654

>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}

Probab=96.00  E-value=0.024  Score=46.80  Aligned_cols=85  Identities=13%  Similarity=0.060  Sum_probs=54.3

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHH-------HHhhCCCCceEEEEecCCCHHHHHHHH---
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKET-------IVKEIPSAKVDAMELDLSSLASVRNFA---   70 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~-------~~~~~~~~~v~~~~~D~~~~~~i~~~~---   70 (251)
                      |+|.|.|. |.+|.++++.|++.|++|++.+|++++.+...+.       ..+...+.++  +..=+.+...++.++   
T Consensus         2 ~~i~iIG~-G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~~~~~~~~aDv--vi~~vp~~~~~~~v~~~~   78 (287)
T 3pef_A            2 QKFGFIGL-GIMGSAMAKNLVKAGCSVTIWNRSPEKAEELAALGAERAATPCEVVESCPV--TFAMLADPAAAEEVCFGK   78 (287)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSGGGGHHHHHTTCEECSSHHHHHHHCSE--EEECCSSHHHHHHHHHST
T ss_pred             CEEEEEee-cHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHCCCeecCCHHHHHhcCCE--EEEEcCCHHHHHHHHcCc
Confidence            56888874 8999999999999999999999998887665431       1111111233  333344566677666   


Q ss_pred             HHHHhcCCCeeEEEEcCC
Q 025509           71 SEYNIQHHQLNILINNAG   88 (251)
Q Consensus        71 ~~~~~~~g~id~lv~~ag   88 (251)
                      +++.....+=.++|++.+
T Consensus        79 ~~l~~~l~~~~~vi~~st   96 (287)
T 3pef_A           79 HGVLEGIGEGRGYVDMST   96 (287)
T ss_dssp             TCHHHHCCTTCEEEECSC
T ss_pred             chHhhcCCCCCEEEeCCC
Confidence            555443333346666654

>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*

Probab=95.98  E-value=0.012  Score=51.03  Aligned_cols=40  Identities=15%  Similarity=0.156  Sum_probs=34.7

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHH
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVK   41 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~   41 (251)
                      ++|+|+|+ |++|.++++.+...|++|+++++++.+.+...
T Consensus       173 ~~V~ViGa-G~iG~~aa~~a~~~Ga~V~~~d~~~~~~~~~~  212 (384)
T 1l7d_A          173 ARVLVFGV-GVAGLQAIATAKRLGAVVMATDVRAATKEQVE  212 (384)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCSTTHHHHH
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH
Confidence            47899996 89999999999999999999999987766553

>1obb_A Maltase, alpha-glucosidase; glycosidase, sulfinic acid, NAD+, maltose, hydrolase; HET: MAL NAD; 1.90A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.2

Probab=95.86  E-value=0.0053  Score=54.77  Aligned_cols=76  Identities=20%  Similarity=0.131  Sum_probs=49.4

Q ss_pred             EEEEECCCC-hhHHHHHHHHHHc----CCEEEEEecCchhHHHHHHHHHhhCC--CCceEEEEecCCCHHHHHHHHHHHH
Q 025509            2 DIVITGATS-GIGTETARVLALR----GVHVVMGVRDIAAGKDVKETIVKEIP--SAKVDAMELDLSSLASVRNFASEYN   74 (251)
Q Consensus         2 ~vlItG~s~-gIG~a~a~~l~~~----G~~Vi~~~r~~~~~~~~~~~~~~~~~--~~~v~~~~~D~~~~~~i~~~~~~~~   74 (251)
                      +|.|.||++ |.|.+++..|++.    |.+|++.++++++++..........+  +....+...  +|.+   +.+    
T Consensus         5 KIaVIGAGsVg~g~ala~~La~~~~l~~~eV~L~Di~~e~l~~~~~~~~~~l~~~~~~~~I~~t--tD~~---eal----   75 (480)
T 1obb_A            5 KIGIIGAGSAVFSLRLVSDLCKTPGLSGSTVTLMDIDEERLDAILTIAKKYVEEVGADLKFEKT--MNLD---DVI----   75 (480)
T ss_dssp             EEEEETTTCHHHHHHHHHHHHTCGGGTTCEEEEECSCHHHHHHHHHHHHHHHHHTTCCCEEEEE--SCHH---HHH----
T ss_pred             EEEEECCCchHHHHHHHHHHHhcCcCCCCEEEEEeCCHHHHHHHHHHHHHHhccCCCCcEEEEE--CCHH---HHh----
Confidence            688999999 8999999988754    78999999999887765443322111  111222211  2321   111    


Q ss_pred             hcCCCeeEEEEcCCC
Q 025509           75 IQHHQLNILINNAGI   89 (251)
Q Consensus        75 ~~~g~id~lv~~ag~   89 (251)
                         ...|+||..+|.
T Consensus        76 ---~dAD~VIiaagv   87 (480)
T 1obb_A           76 ---IDADFVINTAMV   87 (480)
T ss_dssp             ---TTCSEEEECCCT
T ss_pred             ---CCCCEEEECCCc
Confidence               268999999975

>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}

Probab=95.85  E-value=0.037  Score=46.59  Aligned_cols=85  Identities=16%  Similarity=0.123  Sum_probs=53.8

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHH-------HHhhCCCCceEEEEecCCCHHHHHHHHH--
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKET-------IVKEIPSAKVDAMELDLSSLASVRNFAS--   71 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~-------~~~~~~~~~v~~~~~D~~~~~~i~~~~~--   71 (251)
                      ++|.|.|. |.+|.++|+.|++.|++|++.+|++++.+++.+.       ..+...+.++.++  =+.+...++.++.  
T Consensus        32 ~~I~iIG~-G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~l~~~g~~~~~~~~e~~~~aDvVi~--~vp~~~~~~~v~~~~  108 (320)
T 4dll_A           32 RKITFLGT-GSMGLPMARRLCEAGYALQVWNRTPARAASLAALGATIHEQARAAARDADIVVS--MLENGAVVQDVLFAQ  108 (320)
T ss_dssp             SEEEEECC-TTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHTTTCEEESSHHHHHTTCSEEEE--CCSSHHHHHHHHTTT
T ss_pred             CEEEEECc-cHHHHHHHHHHHhCCCeEEEEcCCHHHHHHHHHCCCEeeCCHHHHHhcCCEEEE--ECCCHHHHHHHHcch
Confidence            36778854 8999999999999999999999998877665431       1121112333333  3445566666664  


Q ss_pred             HHHhcCCCeeEEEEcCC
Q 025509           72 EYNIQHHQLNILINNAG   88 (251)
Q Consensus        72 ~~~~~~g~id~lv~~ag   88 (251)
                      .+.....+=.++|++..
T Consensus       109 ~~~~~l~~~~~vi~~st  125 (320)
T 4dll_A          109 GVAAAMKPGSLFLDMAS  125 (320)
T ss_dssp             CHHHHCCTTCEEEECSC
T ss_pred             hHHhhCCCCCEEEecCC
Confidence            44333333356666654

>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}

Probab=95.82  E-value=0.063  Score=45.38  Aligned_cols=77  Identities=16%  Similarity=0.170  Sum_probs=48.3

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCE-EEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCC
Q 025509            1 MDIVITGATSGIGTETARVLALRGVH-VVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQ   79 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~-Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~   79 (251)
                      ++|||+|+ |++|...+..+...|++ ++.+++++++.+.+ +++     +....   .|.++.+ ..+..+++.+ ...
T Consensus       162 ~~VlV~Ga-G~vG~~aiq~ak~~G~~~vi~~~~~~~k~~~a-~~l-----Ga~~~---i~~~~~~-~~~~~~~~~~-~~g  229 (346)
T 4a2c_A          162 KNVIIIGA-GTIGLLAIQCAVALGAKSVTAIDISSEKLALA-KSF-----GAMQT---FNSSEMS-APQMQSVLRE-LRF  229 (346)
T ss_dssp             SEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHH-HHT-----TCSEE---EETTTSC-HHHHHHHHGG-GCS
T ss_pred             CEEEEECC-CCcchHHHHHHHHcCCcEEEEEechHHHHHHH-HHc-----CCeEE---EeCCCCC-HHHHHHhhcc-cCC
Confidence            46899987 89999999888889985 56777877665433 222     44322   2333322 2233333332 346


Q ss_pred             eeEEEEcCCC
Q 025509           80 LNILINNAGI   89 (251)
Q Consensus        80 id~lv~~ag~   89 (251)
                      +|+++.++|.
T Consensus       230 ~d~v~d~~G~  239 (346)
T 4a2c_A          230 NQLILETAGV  239 (346)
T ss_dssp             SEEEEECSCS
T ss_pred             cccccccccc
Confidence            8999999883

>2i6t_A Ubiquitin-conjugating enzyme E2-like isoform A; L-lactate dehydrogenase, oxidoreductase, ubiquitin-protein L unknown function; 2.10A {Homo sapiens} PDB: 3dl2_A

Probab=95.74  E-value=0.15  Score=42.66  Aligned_cols=113  Identities=12%  Similarity=0.134  Sum_probs=63.7

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCC--EEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCC
Q 025509            1 MDIVITGATSGIGTETARVLALRGV--HVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHH   78 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~--~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g   78 (251)
                      ++|.|+|+ |.+|..++..|+.+|.  +|++.+++++ .......+.... ...+... .   |.+           ...
T Consensus        15 ~kV~ViGa-G~vG~~~a~~l~~~g~~~ev~L~Di~~~-~~g~a~dl~~~~-~~~i~~t-~---d~~-----------~l~   76 (303)
T 2i6t_A           15 NKITVVGG-GELGIACTLAISAKGIADRLVLLDLSEG-TKGATMDLEIFN-LPNVEIS-K---DLS-----------ASA   76 (303)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECCC------CHHHHHHHT-CTTEEEE-S---CGG-----------GGT
T ss_pred             CEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEcCCcc-hHHHHHHHhhhc-CCCeEEe-C---CHH-----------HHC
Confidence            36889996 7899999999999998  8999999875 333333333322 2233331 2   221           123


Q ss_pred             CeeEEEEcCCCCCCCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccc
Q 025509           79 QLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGH  144 (251)
Q Consensus        79 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~  144 (251)
                      ..|+||..+|...+.  ++   -.+.+..|    ..+.+.+.+.+.+.    ++.+.++++|....
T Consensus        77 ~aD~Vi~aag~~~pG--~t---R~dl~~~n----~~i~~~i~~~i~~~----~p~a~iiv~sNP~~  129 (303)
T 2i6t_A           77 HSKVVIFTVNSLGSS--QS---YLDVVQSN----VDMFRALVPALGHY----SQHSVLLVASQPVE  129 (303)
T ss_dssp             TCSEEEECCCC------CC---HHHHHHHH----HHHHHHHHHHHHHH----TTTCEEEECSSSHH
T ss_pred             CCCEEEEcCCCCCCC--CC---HHHHHHHH----HHHHHHHHHHHHHh----CCCeEEEEcCChHH
Confidence            789999999974221  12   12223333    33455555555554    24577777776544

>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}

Probab=95.71  E-value=0.083  Score=46.71  Aligned_cols=41  Identities=22%  Similarity=0.240  Sum_probs=35.2

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHH
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKE   42 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~   42 (251)
                      |+|.|.|+ |.+|..+|..|++.|++|++++|++++.+.+.+
T Consensus         3 mkI~VIG~-G~vG~~lA~~La~~G~~V~~~D~~~~~v~~l~~   43 (450)
T 3gg2_A            3 LDIAVVGI-GYVGLVSATCFAELGANVRCIDTDRNKIEQLNS   43 (450)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHH
T ss_pred             CEEEEECc-CHHHHHHHHHHHhcCCEEEEEECCHHHHHHHHc
Confidence            46788865 999999999999999999999999887766544

>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}

Probab=95.71  E-value=0.045  Score=43.03  Aligned_cols=72  Identities=17%  Similarity=0.259  Sum_probs=49.3

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      +++.|.| .|.+|.+++..|++.|++|++.+|+++           ...+.++.++.+-   ...+..+++++..... =
T Consensus        20 ~~I~iiG-~G~mG~~la~~l~~~g~~V~~~~~~~~-----------~~~~aD~vi~av~---~~~~~~v~~~l~~~~~-~   83 (209)
T 2raf_A           20 MEITIFG-KGNMGQAIGHNFEIAGHEVTYYGSKDQ-----------ATTLGEIVIMAVP---YPALAALAKQYATQLK-G   83 (209)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHTTCEEEEECTTCC-----------CSSCCSEEEECSC---HHHHHHHHHHTHHHHT-T
T ss_pred             CEEEEEC-CCHHHHHHHHHHHHCCCEEEEEcCCHH-----------HhccCCEEEEcCC---cHHHHHHHHHHHHhcC-C
Confidence            4688998 799999999999999999999999865           1224455555443   5666777776643322 1


Q ss_pred             eEEEEcCC
Q 025509           81 NILINNAG   88 (251)
Q Consensus        81 d~lv~~ag   88 (251)
                      .++|.++.
T Consensus        84 ~~vi~~~~   91 (209)
T 2raf_A           84 KIVVDITN   91 (209)
T ss_dssp             SEEEECCC
T ss_pred             CEEEEECC
Confidence            25555443

>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}

Probab=95.61  E-value=0.088  Score=45.06  Aligned_cols=40  Identities=30%  Similarity=0.321  Sum_probs=34.6

Q ss_pred             EEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHH
Q 025509            2 DIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKE   42 (251)
Q Consensus         2 ~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~   42 (251)
                      +|.|.|+ |.+|.++|..|++.|++|.+.+|+++..+.+.+
T Consensus        31 kI~VIGa-G~mG~alA~~La~~G~~V~l~~r~~~~~~~i~~   70 (356)
T 3k96_A           31 PIAILGA-GSWGTALALVLARKGQKVRLWSYESDHVDEMQA   70 (356)
T ss_dssp             CEEEECC-SHHHHHHHHHHHTTTCCEEEECSCHHHHHHHHH
T ss_pred             eEEEECc-cHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHH
Confidence            5788885 899999999999999999999999877666554

>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}

Probab=95.59  E-value=0.038  Score=46.25  Aligned_cols=85  Identities=15%  Similarity=0.077  Sum_probs=53.4

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHH-------HHhhCCCCceEEEEecCCCHHHHHHHH---
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKET-------IVKEIPSAKVDAMELDLSSLASVRNFA---   70 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~-------~~~~~~~~~v~~~~~D~~~~~~i~~~~---   70 (251)
                      ++|.|.| .|.+|.++|+.|++.|++|++.+|++++.+.+.+.       ..+....  ..++..=+.++..++.++   
T Consensus        22 ~~I~iIG-~G~mG~~~A~~l~~~G~~V~~~dr~~~~~~~l~~~g~~~~~~~~~~~~~--aDvvi~~vp~~~~~~~v~~~~   98 (310)
T 3doj_A           22 MEVGFLG-LGIMGKAMSMNLLKNGFKVTVWNRTLSKCDELVEHGASVCESPAEVIKK--CKYTIAMLSDPCAALSVVFDK   98 (310)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSGGGGHHHHHTTCEECSSHHHHHHH--CSEEEECCSSHHHHHHHHHST
T ss_pred             CEEEEEC-ccHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHCCCeEcCCHHHHHHh--CCEEEEEcCCHHHHHHHHhCc
Confidence            4677886 58999999999999999999999998887665431       1111111  233333344566666666   


Q ss_pred             HHHHhcCCCeeEEEEcCC
Q 025509           71 SEYNIQHHQLNILINNAG   88 (251)
Q Consensus        71 ~~~~~~~g~id~lv~~ag   88 (251)
                      +.+.....+=.++|++..
T Consensus        99 ~~l~~~l~~g~~vv~~st  116 (310)
T 3doj_A           99 GGVLEQICEGKGYIDMST  116 (310)
T ss_dssp             TCGGGGCCTTCEEEECSC
T ss_pred             hhhhhccCCCCEEEECCC
Confidence            444433333345666554

>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*

Probab=95.57  E-value=0.018  Score=45.55  Aligned_cols=38  Identities=24%  Similarity=0.281  Sum_probs=32.9

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHH
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKD   39 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~   39 (251)
                      +++.|+| .|.+|.++++.|++.|++|++.+|++++.++
T Consensus        29 ~~I~iiG-~G~~G~~la~~l~~~g~~V~~~~r~~~~~~~   66 (215)
T 2vns_A           29 PKVGILG-SGDFARSLATRLVGSGFKVVVGSRNPKRTAR   66 (215)
T ss_dssp             CCEEEEC-CSHHHHHHHHHHHHTTCCEEEEESSHHHHHH
T ss_pred             CEEEEEc-cCHHHHHHHHHHHHCCCEEEEEeCCHHHHHH
Confidence            3588998 8999999999999999999999998766544

>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}

Probab=95.54  E-value=0.13  Score=44.03  Aligned_cols=85  Identities=15%  Similarity=0.200  Sum_probs=53.6

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHH----------HHhhCCCCceEEEEecCCCHHHHHHHH
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKET----------IVKEIPSAKVDAMELDLSSLASVRNFA   70 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~----------~~~~~~~~~v~~~~~D~~~~~~i~~~~   70 (251)
                      ++|.|.| .|-+|..+|+.|++.|++|++.+|++++.+.+.+.          +.+.....++.++.  +.+. .++.++
T Consensus        23 mkIgiIG-lG~mG~~~A~~L~~~G~~V~v~dr~~~~~~~l~~~g~~~~~s~~e~~~~a~~~DvVi~~--vp~~-~v~~vl   98 (358)
T 4e21_A           23 MQIGMIG-LGRMGADMVRRLRKGGHECVVYDLNVNAVQALEREGIAGARSIEEFCAKLVKPRVVWLM--VPAA-VVDSML   98 (358)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHTTTCBCCSSHHHHHHHSCSSCEEEEC--SCGG-GHHHHH
T ss_pred             CEEEEEC-chHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHCCCEEeCCHHHHHhcCCCCCEEEEe--CCHH-HHHHHH
Confidence            3678887 68999999999999999999999998876655321          11111111343333  2222 566666


Q ss_pred             HHHHhcCCCeeEEEEcCCC
Q 025509           71 SEYNIQHHQLNILINNAGI   89 (251)
Q Consensus        71 ~~~~~~~g~id~lv~~ag~   89 (251)
                      +.+.....+=+++|.+...
T Consensus        99 ~~l~~~l~~g~iiId~st~  117 (358)
T 4e21_A           99 QRMTPLLAANDIVIDGGNS  117 (358)
T ss_dssp             HHHGGGCCTTCEEEECSSC
T ss_pred             HHHHhhCCCCCEEEeCCCC
Confidence            6665544334566666543

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	251
d1xg5a_	257	c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC41	1e-36
d1yo6a1	250	c.2.1.2 (A:1-250) Putative carbonyl reductase snif	3e-36
d1wmaa1	275	c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydrox	6e-33
d1yb1a_	244	c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase	6e-32
d2gdza1	254	c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrog	1e-30
d1sbya1	254	c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase	1e-30
d1spxa_	264	c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nemato	4e-30
d1hxha_	253	c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydroge	1e-28
d1ydea1	250	c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase	1e-28
d2d1ya1	248	c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {T	7e-27
d2ew8a1	247	c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenas	1e-25
d1gz6a_	302	c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase do	1e-25
d1h5qa_	260	c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Aga	2e-25
d1xu9a_	269	c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase	3e-25
d1zk4a1	251	c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase	3e-25
d1xkqa_	272	c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorh	2e-24
d1xq1a_	259	c.2.1.2 (A:) Tropinone reductase {Thale cress (Ara	2e-23
d2ae2a_	259	c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datu	3e-23
d1hdca_	254	c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydr	7e-23
d1yxma1	297	c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA re	9e-23
d1xhla_	274	c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorh	9e-23
d1cyda_	242	c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus muscul	1e-22
d1jtva_	285	c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroi	2e-22
d1ulsa_	242	c.2.1.2 (A:) beta-keto acyl carrier protein reduct	6e-22
d1iy8a_	258	c.2.1.2 (A:) Levodione reductase {Corynebacterium	2e-21
d2bgka1	268	c.2.1.2 (A:11-278) Rhizome secoisolariciresinol de	4e-21
d1bdba_	276	c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehy	1e-20
d1ja9a_	259	c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reduc	1e-20
d1zmta1	252	c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Ag	1e-20
d2bd0a1	240	c.2.1.2 (A:2-241) Bacterial sepiapterin reductase	1e-20
d1pr9a_	244	c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapie	2e-20
d1vl8a_	251	c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga	2e-20
d2c07a1	251	c.2.1.2 (A:54-304) beta-keto acyl carrier protein	5e-20
d1oaaa_	259	c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus mus	1e-19
d1fmca_	255	c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase	1e-19
d1w6ua_	294	c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondr	3e-19
d1nffa_	244	c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycob	5e-19
d1x1ta1	260	c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydroge	6e-19
d1edoa_	244	c.2.1.2 (A:) beta-keto acyl carrier protein reduct	7e-19
d1snya_	248	c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly	9e-18
d1zema1	260	c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconoba	2e-17
d1geea_	261	c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megat	2e-17
d1dhra_	236	c.2.1.2 (A:) Dihydropteridin reductase (pteridine	5e-17
d1uaya_	241	c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogena	5e-17
d2rhca1	257	c.2.1.2 (A:5-261) beta-keto acyl carrier protein r	8e-17
d2ag5a1	245	c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR fami	2e-16
d1q7ba_	243	c.2.1.2 (A:) beta-keto acyl carrier protein reduct	2e-16
d2a4ka1	241	c.2.1.2 (A:2-242) beta-keto acyl carrier protein r	2e-16
d1g0oa_	272	c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase	8e-16
d1gega_	255	c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Kl	1e-15
d1uzma1	237	c.2.1.2 (A:9-245) beta-keto acyl carrier protein r	2e-15
d2o23a1	248	c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydr	1e-14
d1ooea_	235	c.2.1.2 (A:) Dihydropteridin reductase (pteridine	1e-14
d1ae1a_	258	c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datu	6e-14
d1k2wa_	256	c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter s	1e-13
d1mxha_	266	c.2.1.2 (A:) Dihydropteridin reductase (pteridine	1e-12
d1qsga_	258	c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli	2e-11
d1o5ia_	234	c.2.1.2 (A:) beta-keto acyl carrier protein reduct	2e-11
d1ulua_	256	c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermoph	4e-10
d1kewa_	361	c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {	1e-09
d1fjha_	257	c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase	1e-08
d1e7wa_	284	c.2.1.2 (A:) Dihydropteridin reductase (pteridine	1e-07
d1jaya_	212	c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase	2e-07
d1udca_	338	c.2.1.2 (A:) Uridine diphosphogalactose-4-epimeras	4e-07
d2fr1a1	259	c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI	8e-07
d1qyda_	312	c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {	1e-05
d1y1pa1	342	c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolo	2e-05
d1luaa1	191	c.2.1.7 (A:98-288) Methylene-tetrahydromethanopter	5e-05
d1xgka_	350	c.2.1.2 (A:) Negative transcriptional regulator Nm	9e-05
d2pd4a1	274	c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacte	1e-04
d1d7oa_	297	c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (B	2e-04
d1z45a2	347	c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-ep	2e-04
d1oc2a_	346	c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {	3e-04
d2h7ma1	268	c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacteri	3e-04
d1qyca_	307	c.2.1.2 (A:) Phenylcoumaran benzylic ether reducta	5e-04
d2blla1	342	c.2.1.2 (A:316-657) Polymyxin resistance protein A	7e-04
d1hdoa_	205	c.2.1.2 (A:) Biliverdin IX beta reductase {Human (	0.001
d2b69a1	312	c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1	0.001
d1r6da_	322	c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {	0.003
d1db3a_	357	c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escheric	0.004

>d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]} Length = 257

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative dehydrogenase ARPG836 (MGC4172)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  128 bits (322), Expect = 1e-36
 Identities = 50/211 (23%), Positives = 81/211 (38%), Gaps = 18/211 (8%)

Query: 3   IVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSS 62
            ++TGA+ GIG   AR L  +G+ VV   R +   +++            +     DLS+
Sbjct: 13  ALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSN 72

Query: 63  LASVRNFASEYNIQHHQLNILINNAGI--MGTPFMLSKDNIELQFATNHLGHFLLTNLLL 120
              + +  S    QH  ++I INNAG+    T    S    +  F  N L   + T    
Sbjct: 73  EEDILSMFSAIRSQHSGVDICINNAGLARPDTLLSGSTSGWKDMFNVNVLALSICTREAY 132

Query: 121 DTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANILHA 180
            +MK+   ++  +G IIN++S                      +    YS +K A     
Sbjct: 133 QSMKE---RNVDDGHIININSMSGHRVL-------------PLSVTHFYSATKYAVTALT 176

Query: 181 NELARRLKEDGVDITANSVHPGAIATNIIRH 211
             L + L+E    I A  + PG + T     
Sbjct: 177 EGLRQELREAQTHIRATCISPGVVETQFAFK 207

>d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]} Length = 250

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative carbonyl reductase sniffer
species: Caenorhabditis elegans [TaxId: 6239]

 Score =  126 bits (318), Expect = 3e-36
 Identities = 59/250 (23%), Positives = 100/250 (40%), Gaps = 23/250 (9%)

Query: 3   IVITGATSGIGTETARVLALRG--VHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDL 60
           +V+TGA  GIG    + L       H++   RD+    +     +K I  ++V  + L +
Sbjct: 6   VVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATE-----LKSIKDSRVHVLPLTV 60

Query: 61  SSLASVRNFASEYN--IQHHQLNILINNAGIM---GTPFMLSKDNIELQFATNHLGHFLL 115
           +   S+  F S+    +    L++LINNAG++   GT    ++  I  Q   N     LL
Sbjct: 61  TCDKSLDTFVSKVGEIVGSDGLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVLL 120

Query: 116 TNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLA 175
           T  LL  +K     S   G  ++VS                    S      AY  SK A
Sbjct: 121 TQKLLPLLKN--AASKESGDQLSVSRAAVITISSGLGSITDNTSGSAQFPVLAYRMSKAA 178

Query: 176 NILHANELARRLKEDGVDITANSVHPGAIATNIIRHNSLF---RSMNTILHAL----PGI 228
             +    LA  LK+D   +   +  PG + TN+   N+     +S   ++ +        
Sbjct: 179 INMFGRTLAVDLKDDN--VLVVNFCPGWVQTNLGGKNAALTVEQSTAELISSFNKLDNSH 236

Query: 229 AGKCLLKNVQ 238
            G+  ++N++
Sbjct: 237 NGRFFMRNLK 246

>d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} Length = 275

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  118 bits (297), Expect = 6e-33
 Identities = 54/240 (22%), Positives = 86/240 (35%), Gaps = 40/240 (16%)

Query: 4   VITGATSGIGTETARVLA-LRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSS 62
           ++TG   GIG    R L  L    VV+  RD+  G+   + +  E         +LD+  
Sbjct: 7   LVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAE--GLSPRFHQLDIDD 64

Query: 63  LASVRNFASEYNIQHHQLNILINNAGIM--GTPFMLSKDNIELQFATNHLGHFLLTNLLL 120
           L S+R        ++  L++L+NNAGI              E+   TN  G   +   LL
Sbjct: 65  LQSIRALRDFLRKEYGGLDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELL 124

Query: 121 DTMKKTARKSGGEGRIINVSSEGHRLA--------------------YHEGIRFDKINDP 160
             +K        +GR++NVSS     A                       G+    + D 
Sbjct: 125 PLIKP-------QGRVVNVSSIMSVRALKSCSPELQQKFRSETITEEELVGLMNKFVEDT 177

Query: 161 S------GYNGFRAYSQSKLANILHANELARRLKEDGV--DITANSVHPGAIATNIIRHN 212
                        AY  +K+   + +   AR+L E      I  N+  PG + T++    
Sbjct: 178 KKGVHQKEGWPSSAYGVTKIGVTVLSRIHARKLSEQRKGDKILLNACCPGWVRTDMAGPK 237

>d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]} Length = 244

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 17-beta-hydroxysteroid dehydrogenase type XI
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  115 bits (289), Expect = 6e-32
 Identities = 49/214 (22%), Positives = 75/214 (35%), Gaps = 25/214 (11%)

Query: 3   IVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSS 62
           ++ITGA  GIG  TA   A     +V+   +    ++           AKV    +D S+
Sbjct: 10  VLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGL--GAKVHTFVVDCSN 67

Query: 63  LASVRNFASEYNIQHHQLNILINNA--GIMGTPFMLSKDNIELQFATNHLGHFLLTNLLL 120
              + + A +   +   ++IL+NNA        F      IE  F  N L HF  T   L
Sbjct: 68  REDIYSSAKKVKAEIGDVSILVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFWTTKAFL 127

Query: 121 DTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANILHA 180
             M K        G I+ V+S    +                     AY  SK A +   
Sbjct: 128 PAMTK-----NNHGHIVTVASAAGHV---------------SVPFLLAYCSSKFAAVGFH 167

Query: 181 NELARRLKEDGVD-ITANSVHPGAIATNIIRHNS 213
             L   L    +  +    + P  + T  I++ S
Sbjct: 168 KTLTDELAALQITGVKTTCLCPNFVNTGFIKNPS 201

>d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]} Length = 254

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 15-hydroxyprostaglandin dehydrogenase, PGDH
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  112 bits (280), Expect = 1e-30
 Identities = 49/209 (23%), Positives = 81/209 (38%), Gaps = 23/209 (11%)

Query: 3   IVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSS 62
            ++TGA  GIG   A  L L+G  V +   ++ AG   K  + ++    K   ++ D++ 
Sbjct: 6   ALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVAD 65

Query: 63  LASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDT 122
              +R+   +      +L+IL+NNAG+       ++ N E     N +     T L LD 
Sbjct: 66  QQQLRDTFRKVVDHFGRLDILVNNAGVN------NEKNWEKTLQINLVSVISGTYLGLDY 119

Query: 123 MKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANILHANE 182
           M K  +  G  G IIN+SS    +                      Y  SK   +     
Sbjct: 120 MSK--QNGGEGGIIINMSSLAGLM---------------PVAQQPVYCASKHGIVGFTRS 162

Query: 183 LARRLKEDGVDITANSVHPGAIATNIIRH 211
            A         +  N++ PG + T I+  
Sbjct: 163 AALAANLMNSGVRLNAICPGFVNTAILES 191

>d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]} Length = 254

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Drosophila alcohol dehydrogenase
species: Fly (Drosophila lebanonensis) [TaxId: 7225]

 Score =  112 bits (280), Expect = 1e-30
 Identities = 52/225 (23%), Positives = 85/225 (37%), Gaps = 27/225 (12%)

Query: 3   IVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLS- 61
           ++   A  GIG +T+R L  R +   + +  +     + E      P   +     D++ 
Sbjct: 8   VIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTALAELKAIN-PKVNITFHTYDVTV 66

Query: 62  SLASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLD 121
            +A  +    +   Q   ++ILIN AGI+          IE   A N  G    T  +LD
Sbjct: 67  PVAESKKLLKKIFDQLKTVDILINGAGIL------DDHQIERTIAINFTGLVNTTTAILD 120

Query: 122 TMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANILHAN 181
              K  RK G  G I N+ S                   +  +    YS SK A +   N
Sbjct: 121 FWDK--RKGGPGGIIANICSVTGF---------------NAIHQVPVYSASKAAVVSFTN 163

Query: 182 ELARRLKEDGVDITANSVHPGAIATNIIRHNSLFRSMNTILHALP 226
            LA+     G  +TA S++PG   T ++   + +  +   +  L 
Sbjct: 164 SLAKLAPITG--VTAYSINPGITRTPLVHTFNSWLDVEPRVAELL 206

>d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 264

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase (5l265)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

 Score =  111 bits (278), Expect = 4e-30
 Identities = 49/216 (22%), Positives = 83/216 (38%), Gaps = 29/216 (13%)

Query: 3   IVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKE-IPSAKVDAMELDLS 61
            +ITG+++GIG  TA + A  G  V +  R     ++ ++ I+   +    V+++  D++
Sbjct: 8   AIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVT 67

Query: 62  SLASVRNFASEYNIQHHQLNILINNAGIM------GTPFMLSKDNIELQFATNHLGHFLL 115
           + A      S    +  +L+IL+NNAG         T    S ++ +     N      L
Sbjct: 68  TDAGQDEILSTTLGKFGKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRSVIAL 127

Query: 116 TNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLA 175
           T   +  +  T     GE   I+  + G                      F  YS +K A
Sbjct: 128 TKKAVPHLSST----KGEIVNISSIASGLH----------------ATPDFPYYSIAKAA 167

Query: 176 NILHANELARRLKEDGVDITANSVHPGAIATNIIRH 211
              +    A  L + G  I  NS+ PG +AT     
Sbjct: 168 IDQYTRNTAIDLIQHG--IRVNSISPGLVATGFGSA 201

>d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} Length = 253

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3beta/17beta hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

 Score =  106 bits (267), Expect = 1e-28
 Identities = 50/210 (23%), Positives = 81/210 (38%), Gaps = 28/210 (13%)

Query: 3   IVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSS 62
            ++TG  SG+G E  ++L   G  V     + AAG+ +   +       +   +  D+SS
Sbjct: 9   ALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAEL-----GERSMFVRHDVSS 63

Query: 63  LASVRNFASEYNIQHHQLNILINNAGIM--GTPFMLSKDNIELQFATNHLGHFLLTNLLL 120
            A      +    +   LN+L+NNAGI+  G       ++       N    F+     +
Sbjct: 64  EADWTLVMAAVQRRLGTLNVLVNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQQGI 123

Query: 121 DTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANILHA 180
             MK+T       G IIN++S    L                   +  YS SK A     
Sbjct: 124 AAMKETG------GSIINMASVSSWL---------------PIEQYAGYSASKAAVSALT 162

Query: 181 NELARRLKEDGVDITANSVHPGAIATNIIR 210
              A   ++ G  I  NS+HP  I T +++
Sbjct: 163 RAAALSCRKQGYAIRVNSIHPDGIYTPMMQ 192

>d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]} Length = 250

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Retinal dehydrogenase/reductase 3
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  106 bits (267), Expect = 1e-28
 Identities = 47/212 (22%), Positives = 76/212 (35%), Gaps = 32/212 (15%)

Query: 3   IVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSS 62
           +V+TG   GIG    R     G  VV+  +D + G+ +++ +           +  D++ 
Sbjct: 9   VVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQEL------PGAVFILCDVTQ 62

Query: 63  LASVRNFASEYNIQHHQLNILINNA---GIMGTPFMLSKDNIELQFATNHLGHFLLTNLL 119
              V+   SE   +  +L+ ++NNA        P   S          N LG + LT L 
Sbjct: 63  EDDVKTLVSETIRRFGRLDCVVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLA 122

Query: 120 LDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANILH 179
           L  ++K       +G +IN+SS                    G      Y  +K A    
Sbjct: 123 LPYLRK------SQGNVINISSLVGA---------------IGQAQAVPYVATKGAVTAM 161

Query: 180 ANELARRLKEDGVDITANSVHPGAIATNIIRH 211
              LA      G  +  N + PG I T +   
Sbjct: 162 TKALALDESPYG--VRVNCISPGNIWTPLWEE 191

>d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]} Length = 248

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein TTHA0369
species: Thermus thermophilus [TaxId: 274]

 Score =  102 bits (255), Expect = 7e-27
 Identities = 51/211 (24%), Positives = 75/211 (35%), Gaps = 32/211 (15%)

Query: 3   IVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSS 62
           +++TG   GIG   A+  A  G  V +       GK+V E I            ++DL  
Sbjct: 8   VLVTGGARGIGRAIAQAFAREGALVALCDLR-PEGKEVAEAI-------GGAFFQVDLED 59

Query: 63  LASVRNFASEYNIQHHQLNILINNAGIM--GTPFMLSKDNIELQFATNHLGHFLLTNLLL 120
                 F  E      ++++L+NNA I   G+   +           N      L+ L  
Sbjct: 60  ERERVRFVEEAAYALGRVDVLVNNAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLSALAA 119

Query: 121 DTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANILHA 180
             M+K      G G I+NV+S               +          AY+ SK   +   
Sbjct: 120 REMRK-----VGGGAIVNVAS---------------VQGLFAEQENAAYNASKGGLVNLT 159

Query: 181 NELARRLKEDGVDITANSVHPGAIATNIIRH 211
             LA  L      I  N+V PGAIAT  +  
Sbjct: 160 RSLALDLAPLR--IRVNAVAPGAIATEAVLE 188

>d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]} Length = 247

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (s)-1-phenylethanol dehydrogenase
species: Azoarcus sp. ebn1 [TaxId: 76114]

 Score = 99.2 bits (247), Expect = 1e-25
 Identities = 61/232 (26%), Positives = 97/232 (41%), Gaps = 31/232 (13%)

Query: 3   IVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSS 62
            VITG  +GIG   A   A+ G  +   + D+    + +  I       +V  ++ D+S 
Sbjct: 8   AVITGGANGIGRAIAERFAVEGADIA--IADLVPAPEAEAAI--RNLGRRVLTVKCDVSQ 63

Query: 63  LASVRNFASEYNIQHHQLNILINNAGIM-GTPFM-LSKDNIELQFATNHLGHFLLTNLLL 120
              V  F  +      + +IL+NNAGI    PF  L+ +  +  F  N    FL+    +
Sbjct: 64  PGDVEAFGKQVISTFGRCDILVNNAGIYPLIPFDELTFEQWKKTFEINVDSGFLMAKAFV 123

Query: 121 DTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANILHA 180
             MK+      G GRIIN++S  + L                   +  Y  +K ANI   
Sbjct: 124 PGMKR-----NGWGRIINLTSTTYWL---------------KIEAYTHYISTKAANIGFT 163

Query: 181 NELARRLKEDGVDITANSVHPGAIATNIIRHNSL---FRSMNTILHALPGIA 229
             LA  L +DG  IT N++ P  + T     ++L   F  +  +L A+P + 
Sbjct: 164 RALASDLGKDG--ITVNAIAPSLVRTATTEASALSAMFDVLPNMLQAIPRLQ 213

>d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 302

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 99.7 bits (248), Expect = 1e-25
 Identities = 47/213 (22%), Positives = 84/213 (39%), Gaps = 30/213 (14%)

Query: 3   IVITGATSGIGTETARVLALRGVHVVMGVRD-----IAAGKDVKETIVKEIPSAKVDAME 57
           +++TGA  G+G   A   A RG  VV+         +  G    + +V+EI   +     
Sbjct: 10  VLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIR-RRGGKAV 68

Query: 58  LDLSSLASVRNFASEYNIQHHQLNILINNAGIM--GTPFMLSKDNIELQFATNHLGHFLL 115
            +  S+ +             ++++++NNAGI+   +   +S ++ ++    +  G F +
Sbjct: 69  ANYDSVEAGEKLVKTALDTFGRIDVVVNNAGILRDRSFSRISDEDWDIIQRVHLRGSFQV 128

Query: 116 TNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLA 175
           T    D MKK        GRII  +S                    G  G   YS +KL 
Sbjct: 129 TRAAWDHMKK-----QNYGRIIMTASASGIY---------------GNFGQANYSAAKLG 168

Query: 176 NILHANELARRLKEDGVDITANSVHPGAIATNI 208
            +  AN L    +++   I  N++ P A +   
Sbjct: 169 LLGLANTLVIEGRKNN--IHCNTIAPNAGSRMT 199

>d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]} Length = 260

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Mannitol dehydrogenase
species: Mushroom (Agaricus bisporus) [TaxId: 5341]

 Score = 98.6 bits (245), Expect = 2e-25
 Identities = 46/209 (22%), Positives = 77/209 (36%), Gaps = 13/209 (6%)

Query: 3   IVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSS 62
           I++TG   GIG    R +A  G +V +  R  A   +V E + KE    K  A + D+S+
Sbjct: 12  IIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFG-VKTKAYQCDVSN 70

Query: 63  LASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDT 122
              V     + +     ++ LI NA    +    + +     FA  +  +          
Sbjct: 71  TDIVTKTIQQIDADLGPISGLIANA--GVSVVKPATELTHEDFAFVYDVNVFGVFNTCRA 128

Query: 123 MKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANILHANE 182
           + K   +   +G I+  SS   ++     +         G      Y+ SK A       
Sbjct: 129 VAKLWLQKQQKGSIVVTSSMSSQIINQSSLN--------GSLTQVFYNSSKAACSNLVKG 180

Query: 183 LARRLKEDGVDITANSVHPGAIATNIIRH 211
           LA      G  I  N++ PG + T+   H
Sbjct: 181 LAAEWASAG--IRVNALSPGYVNTDQTAH 207

>d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 269

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 11-beta-hydroxysteroid dehydrogenase 1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 98.3 bits (244), Expect = 3e-25
 Identities = 46/212 (21%), Positives = 77/212 (36%), Gaps = 24/212 (11%)

Query: 3   IVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSS 62
           +++TGA+ GIG E A  LA  G HVV+  R     + V    + E+ +A    +   +  
Sbjct: 17  VIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCL-ELGAASAHYIAGTMED 75

Query: 63  LASVRNFASEYNIQHHQLNILINNAGIM--GTPFMLSKDNIELQFATNHLGHFLLTNLLL 120
           +     F ++       L++LI N         F     ++      N L + +LT   L
Sbjct: 76  MTFAEQFVAQAGKLMGGLDMLILNHITNTSLNLFHDDIHHVRKSMEVNFLSYVVLTVAAL 135

Query: 121 DTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANILHA 180
             +K+        G I+ VSS   ++                Y    AYS SK A     
Sbjct: 136 PMLKQ------SNGSIVVVSSLAGKV---------------AYPMVAAYSASKFALDGFF 174

Query: 181 NELARRLKEDGVDITANSVHPGAIATNIIRHN 212
           + + +      V+++      G I T      
Sbjct: 175 SSIRKEYSVSRVNVSITLCVLGLIDTETAMKA 206

>d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]} Length = 251

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: R-specific alcohol dehydrogenase
species: Lactobacillus brevis [TaxId: 1580]

 Score = 97.8 bits (243), Expect = 3e-25
 Identities = 48/211 (22%), Positives = 72/211 (34%), Gaps = 24/211 (11%)

Query: 3   IVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSS 62
            +ITG T GIG   A      G  V++  R    G+   +++       ++   + D S 
Sbjct: 9   AIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGTP---DQIQFFQHDSSD 65

Query: 63  LASVRNFASEYNIQHHQLNILINNAGIMGTPFM--LSKDNIELQFATNHLGHFLLTNLLL 120
                            ++ L+NNAGI     +   +        A N  G F  T L +
Sbjct: 66  EDGWTKLFDATEKAFGPVSTLVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGTRLGI 125

Query: 121 DTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANILHA 180
             MK   +  G    I   S EG                  G     AY+ SK A  + +
Sbjct: 126 QRMKN--KGLGAS-IINMSSIEGFV----------------GDPSLGAYNASKGAVRIMS 166

Query: 181 NELARRLKEDGVDITANSVHPGAIATNIIRH 211
              A        D+  N+VHPG I T ++  
Sbjct: 167 KSAALDCALKDYDVRVNTVHPGYIKTPLVDD 197

>d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]} Length = 272

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein R05D8.7
species: Caenorhabditis elegans [TaxId: 6239]

 Score = 96.2 bits (239), Expect = 2e-24
 Identities = 43/216 (19%), Positives = 82/216 (37%), Gaps = 29/216 (13%)

Query: 3   IVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKE-IPSAKVDAMELDLS 61
           ++ITG+++GIG  TA + A  G +V +  R     ++ ++ I+K  +   +V+++  D++
Sbjct: 8   VIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVT 67

Query: 62  SLASVRNFASEYNIQHHQLNILINNAGIMG------TPFMLSKDNIELQFATNHLGHFLL 115
           +        +    Q  ++++L+NNAG         T      D        N      +
Sbjct: 68  TEDGQDQIINSTLKQFGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQAVIEM 127

Query: 116 TNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLA 175
           T  +   +  +     GE   ++    G +                    F  Y+ +K A
Sbjct: 128 TKKVKPHLVAS----KGEIVNVSSIVAGPQ----------------AQPDFLYYAIAKAA 167

Query: 176 NILHANELARRLKEDGVDITANSVHPGAIATNIIRH 211
              +    A  L + G  I  NSV PG + T     
Sbjct: 168 LDQYTRSTAIDLAKFG--IRVNSVSPGMVETGFTNA 201

>d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 93.5 bits (232), Expect = 2e-23
 Identities = 51/227 (22%), Positives = 80/227 (35%), Gaps = 27/227 (11%)

Query: 3   IVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSS 62
           +++TG T GIG       A  G  +    R+     +      K+    +V     D S 
Sbjct: 11  VLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKK--GFQVTGSVCDASL 68

Query: 63  LASVRNFASEYNIQHH-QLNILINNAGIMG-TPFM-LSKDNIELQFATNHLGHFLLTNLL 119
                      +     +L+ILINN G +   P +  + ++     +TN    + L+ L 
Sbjct: 69  RPEREKLMQTVSSMFGGKLDILINNLGAIRSKPTLDYTAEDFSFHISTNLESAYHLSQLA 128

Query: 120 LDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANILH 179
              +K +     G G II +SS    ++   G                 YS +K A    
Sbjct: 129 HPLLKAS-----GCGNIIFMSSIAGVVSASVGS---------------IYSATKGALNQL 168

Query: 180 ANELARRLKEDGVDITANSVHPGAIATNIIRHNSLFRSMNTILHALP 226
           A  LA     DG  I AN+V P  IAT +            ++   P
Sbjct: 169 ARNLACEWASDG--IRANAVAPAVIATPLAEAVYDDEFKKVVISRKP 213

>d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), II [TaxId: 4076]

 Score = 92.8 bits (230), Expect = 3e-23
 Identities = 51/212 (24%), Positives = 76/212 (35%), Gaps = 27/212 (12%)

Query: 3   IVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSS 62
            ++TG + GIG      LA  G  V    R+     D       +    KV+A   DLSS
Sbjct: 11  ALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSK--GFKVEASVCDLSS 68

Query: 63  LASVRNFASE-YNIQHHQLNILINNAGIM--GTPFMLSKDNIELQFATNHLGHFLLTNLL 119
            +  +   +   N  H +LNIL+NNAGI+        + ++  L  + N    + L+ L 
Sbjct: 69  RSERQELMNTVANHFHGKLNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLSVLA 128

Query: 120 LDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANILH 179
              +K     S     +   S  G                         Y  +K A    
Sbjct: 129 HPFLK----ASERGNVVFISSVSGAL----------------AVPYEAVYGATKGAMDQL 168

Query: 180 ANELARRLKEDGVDITANSVHPGAIATNIIRH 211
              LA    +D   I  N V PG IAT+++  
Sbjct: 169 TRCLAFEWAKDN--IRVNGVGPGVIATSLVEM 198

>d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]} Length = 254

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase
species: Streptomyces hydrogenans [TaxId: 1905]

 Score = 91.6 bits (227), Expect = 7e-23
 Identities = 46/213 (21%), Positives = 69/213 (32%), Gaps = 29/213 (13%)

Query: 3   IVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSS 62
           ++ITG   G+G E AR     G  VV+       G      +             LD++ 
Sbjct: 8   VIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATAREL-----GDAARYQHLDVTI 62

Query: 63  LASVRNFASEYNIQHHQLNILINNAGIM--GTPFMLSKDNIELQFATNHLGHFLLTNLLL 120
               +   +    +   ++ L+NNAGI         S +        N  G F+    ++
Sbjct: 63  EEDWQRVVAYAREEFGSVDGLVNNAGISTGMFLETESVERFRKVVEINLTGVFIGMKTVI 122

Query: 121 DTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANILHA 180
             MK       G G I+N+SS    +                     +Y  SK      +
Sbjct: 123 PAMKD-----AGGGSIVNISSAAGLMGLALTS---------------SYGASKWGVRGLS 162

Query: 181 NELARRLKEDGVDITANSVHPGAIATNIIRHNS 213
              A  L  D   I  NSVHPG   T +     
Sbjct: 163 KLAAVELGTD--RIRVNSVHPGMTYTPMTAETG 193

>d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]} Length = 297

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Peroxisomal trans 2-enoyl CoA reductase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 92.4 bits (229), Expect = 9e-23
 Identities = 41/215 (19%), Positives = 71/215 (33%), Gaps = 28/215 (13%)

Query: 3   IVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPS---AKVDAMELD 59
            ++TG  +GIG    + L   G +VV+  R +   K   + +   +P    A+V  ++ +
Sbjct: 15  AIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCN 74

Query: 60  LSSLASVRNFASEYNIQHHQLNILINNAGI--MGTPFMLSKDNIELQFATNHLGHFLLTN 117
           + +   V N          ++N L+NN G   +     +S         TN  G F +  
Sbjct: 75  IRNEEEVNNLVKSTLDTFGKINFLVNNGGGQFLSPAEHISSKGWHAVLETNLTGTFYMCK 134

Query: 118 LLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANI 177
            +  +  K        G I+N+                      G+        ++    
Sbjct: 135 AVYSSWMK-----EHGGSIVNIIVPTKA----------------GFPLAVHSGAARAGVY 173

Query: 178 LHANELARRLKEDGVDITANSVHPGAIATNIIRHN 212
                LA      G  I  N V PG I +     N
Sbjct: 174 NLTKSLALEWACSG--IRINCVAPGVIYSQTAVEN 206

>d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]} Length = 274

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein F25D1.5
species: Caenorhabditis elegans [TaxId: 6239]

 Score = 91.6 bits (227), Expect = 9e-23
 Identities = 43/214 (20%), Positives = 85/214 (39%), Gaps = 27/214 (12%)

Query: 3   IVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKE-IPSAKVDAMELDLS 61
           ++ITG+++GIG   A + A  G  V +  R+    ++ K+ I+K  +P+ K++A+  D++
Sbjct: 7   VIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVT 66

Query: 62  SLASVRNFASEYNIQHHQLNILINNAGIMGTPFML----SKDNIELQFATNHLGHFLLTN 117
             +   +  +    +  +++IL+NNAG              +  +  F  N      +T 
Sbjct: 67  EASGQDDIINTTLAKFGKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQAVIEMTQ 126

Query: 118 LLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANI 177
                                      +           +  P  ++G+  Y+ +K A  
Sbjct: 127 --------------------KTKEHLIKTKGEIVNVSSIVAGPQAHSGYPYYACAKAALD 166

Query: 178 LHANELARRLKEDGVDITANSVHPGAIATNIIRH 211
            +    A  L + G  +  NSV PGA+AT  +  
Sbjct: 167 QYTRCTAIDLIQHG--VRVNSVSPGAVATGFMGA 198

>d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]} Length = 242

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 90.4 bits (224), Expect = 1e-22
 Identities = 42/210 (20%), Positives = 80/210 (38%), Gaps = 33/210 (15%)

Query: 3   IVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSS 62
            ++TGA  GIG +T + L   G  VV   R  +    + +          ++ + +DL  
Sbjct: 8   ALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKEC------PGIEPVCVDLGD 61

Query: 63  LASVRNFASEYNIQHHQLNILINNAGI--MGTPFMLSKDNIELQFATNHLGHFLLTNLLL 120
             +              +++L+NNA +  M     ++K+  +  F+ N    F ++ ++ 
Sbjct: 62  WDATEKALGGIG----PVDLLVNNAALVIMQPFLEVTKEAFDRSFSVNLRSVFQVSQMVA 117

Query: 121 DTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANILHA 180
               +     G  G I+NVSS    +                +     YS +K A  +  
Sbjct: 118 ----RDMINRGVPGSIVNVSSMVAHV---------------TFPNLITYSSTKGAMTMLT 158

Query: 181 NELARRLKEDGVDITANSVHPGAIATNIIR 210
             +A  L      I  NSV+P  + T++ +
Sbjct: 159 KAMAMELGPHK--IRVNSVNPTVVLTDMGK 186

>d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 90.7 bits (224), Expect = 2e-22
 Identities = 44/213 (20%), Positives = 72/213 (33%), Gaps = 26/213 (12%)

Query: 3   IVITGATSGIGTETARVLALRG---VHVVMGVRDIAAGKDVKETIVK-EIPSAKVDAMEL 58
           ++ITG +SGIG   A  LA        V   +RD+     + E       P   ++ ++L
Sbjct: 5   VLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQL 64

Query: 59  DLSSLASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNL 118
           D+    SV             + +     G++G    L +D +      N +G   +   
Sbjct: 65  DVRDSKSVAAARERVTEGRVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQA 124

Query: 119 LLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANIL 178
            L  MK+      G GR++   S G  +               G      Y  SK A   
Sbjct: 125 FLPDMKR-----RGSGRVLVTGSVGGLM---------------GLPFNDVYCASKFALEG 164

Query: 179 HANELARRLKEDGVDITANSVHPGAIATNIIRH 211
               LA  L   G  +  + +  G + T  +  
Sbjct: 165 LCESLAVLLLPFG--VHLSLIECGPVHTAFMEK 195

>d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]} Length = 242

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus [TaxId: 274]

 Score = 88.9 bits (220), Expect = 6e-22
 Identities = 44/213 (20%), Positives = 78/213 (36%), Gaps = 32/213 (15%)

Query: 3   IVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSS 62
           ++ITGA  GIG  T  + A  G  +V    +    ++  E +           + +D++ 
Sbjct: 8   VLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAV-------GAHPVVMDVAD 60

Query: 63  LASVRNFASEYNIQHHQLNILINNAG--IMGTPFMLSKDNIELQFATNHLGHFLLTNLLL 120
            ASV    +E      +L+ +++ AG       + +  ++ EL    N  G FL+     
Sbjct: 61  PASVERGFAEALAHLGRLDGVVHYAGITRDNFHWKMPLEDWELVLRVNLTGSFLVAKAAS 120

Query: 121 DTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANILHA 180
           + M++        G I+  +S  +                 G  G   Y+ S    +   
Sbjct: 121 EAMRE-----KNPGSIVLTASRVYL----------------GNLGQANYAASMAGVVGLT 159

Query: 181 NELARRLKEDGVDITANSVHPGAIATNIIRHNS 213
             LA  L   G  I  N++ PG I T +     
Sbjct: 160 RTLALELGRWG--IRVNTLAPGFIETRMTAKVP 190

>d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]} Length = 258

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Levodione reductase
species: Corynebacterium aquaticum [TaxId: 144185]

 Score = 87.5 bits (216), Expect = 2e-21
 Identities = 44/209 (21%), Positives = 78/209 (37%), Gaps = 19/209 (9%)

Query: 3   IVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSS 62
           ++ITG  SG+G  TA  LA  G  + +        +  K  +++  P A+V     D+S 
Sbjct: 7   VLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSD 66

Query: 63  LASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDT 122
            A V  + +    +  +++   NNAG +      ++     +F      +     L L+ 
Sbjct: 67  EAQVEAYVTATTERFGRIDGFFNNAG-IEGKQNPTESFTAAEFDKVVSINLRGVFLGLEK 125

Query: 123 MKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANILHANE 182
           + K  R+ G    +   S  G R                G      Y+ +K   +     
Sbjct: 126 VLKIMREQGSGMVVNTASVGGIR----------------GIGNQSGYAAAKHGVVGLTRN 169

Query: 183 LARRLKEDGVDITANSVHPGAIATNIIRH 211
            A      G  I  N++ PGAI T ++ +
Sbjct: 170 SAVEYGRYG--IRINAIAPGAIWTPMVEN 196

>d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]} Length = 268

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Rhizome secoisolariciresinol dehydrogenase
species: Mayapple (Podophyllum peltatum) [TaxId: 35933]

 Score = 87.0 bits (215), Expect = 4e-21
 Identities = 46/213 (21%), Positives = 75/213 (35%), Gaps = 28/213 (13%)

Query: 3   IVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSS 62
            +ITG   GIG  TA++    G  VV+       G+ V   I        +  +  D++ 
Sbjct: 9   AIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGSP---DVISFVHCDVTK 65

Query: 63  LASVRNFASEYNIQHHQLNILINNAGIMGT----PFMLSKDNIELQFATNHLGHFLLTNL 118
              VRN       +H +L+I+  N G++ T          ++ +     N  G FL+   
Sbjct: 66  DEDVRNLVDTTIAKHGKLDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKH 125

Query: 119 LLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANIL 178
               M     K G      ++SS                   +G      Y+ +K A + 
Sbjct: 126 AARVMIP--AKKGSIVFTASISSFT-----------------AGEGVSHVYTATKHAVLG 166

Query: 179 HANELARRLKEDGVDITANSVHPGAIATNIIRH 211
               L   L E G  I  N V P  +A+ ++  
Sbjct: 167 LTTSLCTELGEYG--IRVNCVSPYIVASPLLTD 197

>d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]} Length = 276

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase
species: Pseudomonas sp., lb400 [TaxId: 306]

 Score = 86.2 bits (213), Expect = 1e-20
 Identities = 42/219 (19%), Positives = 70/219 (31%), Gaps = 36/219 (16%)

Query: 3   IVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSS 62
           ++ITG  SG+G          G  V +  +      +++           V  +  D+ S
Sbjct: 8   VLITGGASGLGRALVDRFVAEGAKVAVLDKSAERLAELETDH-----GDNVLGIVGDVRS 62

Query: 63  LASVRNFASEYNIQHHQLNILINNAGIMG-------TPFMLSKDNIELQFATNHLGHFLL 115
           L   +  AS    +  +++ LI NAGI          P        +  F  N  G+   
Sbjct: 63  LEDQKQAASRCVARFGKIDTLIPNAGIWDYSTALVDLPEESLDAAFDEVFHINVKGYIHA 122

Query: 116 TNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLA 175
               L  +            I  +S+ G                     G   Y+ +K A
Sbjct: 123 VKACLPALVA-----SRGNVIFTISNAGFY----------------PNGGGPLYTAAKHA 161

Query: 176 NILHANELARRLKEDGVDITANSVHPGAIATNIIRHNSL 214
            +    ELA  L      +  N V  G I +++   +SL
Sbjct: 162 IVGLVRELAFEL---APYVRVNGVGSGGINSDLRGPSSL 197

>d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,6,8-tetrahydroxynaphthalene reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

 Score = 85.6 bits (211), Expect = 1e-20
 Identities = 43/221 (19%), Positives = 77/221 (34%), Gaps = 30/221 (13%)

Query: 3   IVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSA--KVDAMELDL 60
            + TGA  GIG   A  L  RG  VV+            E +V E+     +  A++ D+
Sbjct: 9   ALTTGAGRGIGRGIAIELGRRGASVVVNYGS---SSKAAEEVVAELKKLGAQGVAIQADI 65

Query: 61  SSLASVRNFASEYNIQHHQLNILINNAGI--MGTPFMLSKDNIELQFATNHLGHFLLTNL 118
           S  + V     +       L+ +++N+G+        ++++  +  F  N  G F +   
Sbjct: 66  SKPSEVVALFDKAVSHFGGLDFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVAQQ 125

Query: 119 LLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANIL 178
            L   ++     GG   + +  +                    G      Y+ SK A   
Sbjct: 126 GLKHCRR-----GGRIILTSSIAAVMT----------------GIPNHALYAGSKAAVEG 164

Query: 179 HANELARRLKEDGVDITANSVHPGAIATNIIRHNSLFRSMN 219
                A      G  +T N + PG + T++   NS   +  
Sbjct: 165 FCRAFAVDCGAKG--VTVNCIAPGGVKTDMFDENSWHYAPG 203

>d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]} Length = 252

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Halohydrin dehalogenase HheC
species: Agrobacterium tumefaciens [TaxId: 358]

 Score = 85.5 bits (211), Expect = 1e-20
 Identities = 25/211 (11%), Positives = 56/211 (26%), Gaps = 33/211 (15%)

Query: 4   VITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSL 63
           ++T      G  +A  L+  G  V           +++               +L   S 
Sbjct: 4   IVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDELEA--------FAETYPQLKPMSE 55

Query: 64  ASVRNFASEYNIQHHQLNILINNAGIMG--TPFM-LSKDNIELQFATNHLGHFLLTNLLL 120
                        + Q+++L++N        P    + ++         +  F L N + 
Sbjct: 56  QEPAELIEAVTSAYGQVDVLVSNDIFAPEFQPIDKYAVEDYRGAVEALQIRPFALVNAVA 115

Query: 121 DTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANILHA 180
             M                     +      I          +     Y+ ++      A
Sbjct: 116 SQM--------------------KKRKSGHIIFITSATPFGPWKELSTYTSARAGACTLA 155

Query: 181 NELARRLKEDGVDITANSVHPGAIATNIIRH 211
           N L++ L E    I   ++ P  + +    +
Sbjct: 156 NALSKELGEYN--IPVFAIGPNYLHSEDSPY 184

>d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]} Length = 240

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Bacterial sepiapterin reductase
species: Chlorobium tepidum [TaxId: 1097]

 Score = 85.2 bits (210), Expect = 1e-20
 Identities = 47/218 (21%), Positives = 79/218 (36%), Gaps = 33/218 (15%)

Query: 3   IVITGATSGIGTETARVLALRGVH-------VVMGVRDIAAGKDVKETIVKEIPSAKVDA 55
           ++ITGA  GIG   A   A    H       +V+  R  A  + +      E   A  D 
Sbjct: 4   LLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAE--GALTDT 61

Query: 56  MELDLSSLASVRNFASEYNIQHHQLNILINNAGIM--GTPFMLSKDNIELQFATNHLGHF 113
           +  D+S +A VR   +    ++  ++ L+NNAG+   G    L++++ +    TN  G F
Sbjct: 62  ITADISDMADVRRLTTHIVERYGHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTF 121

Query: 114 LLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSK 173
            LT  L   M++        G I  ++S                     +     Y  SK
Sbjct: 122 FLTQALFALMER-----QHSGHIFFITSVAATK---------------AFRHSSIYCMSK 161

Query: 174 LANILHANELARRLKEDGVDITANSVHPGAIATNIIRH 211
                    +    ++    +    V PGA+ T +   
Sbjct: 162 FGQRGLVETMRLYARKCN--VRITDVQPGAVYTPMWGK 197

>d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]} Length = 244

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 85.1 bits (210), Expect = 2e-20
 Identities = 43/210 (20%), Positives = 82/210 (39%), Gaps = 33/210 (15%)

Query: 3   IVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSS 62
           +++TGA  GIG  T + L   G  VV   R  A      +++V+E P   ++ + +DL  
Sbjct: 10  VLVTGAGKGIGRGTVQALHATGARVVAVSRTQADL----DSLVRECP--GIEPVCVDLGD 63

Query: 63  LASVRNFASEYNIQHHQLNILINNAGIM--GTPFMLSKDNIELQFATNHLGHFLLTNLLL 120
             +              +++L+NNA +        ++K+  +  F  N      ++ ++ 
Sbjct: 64  WEATERALGSVG----PVDLLVNNAAVALLQPFLEVTKEAFDRSFEVNLRAVIQVSQIVA 119

Query: 121 DTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANILHA 180
               +     G  G I+NVSS+  + A                     Y  +K A  +  
Sbjct: 120 ----RGLIARGVPGAIVNVSSQCSQRAVT---------------NHSVYCSTKGALDMLT 160

Query: 181 NELARRLKEDGVDITANSVHPGAIATNIIR 210
             +A  L      I  N+V+P  + T++ +
Sbjct: 161 KVMALELGPHK--IRVNAVNPTVVMTSMGQ 188

>d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]} Length = 251

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Gluconate 5-dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

 Score = 84.7 bits (209), Expect = 2e-20
 Identities = 35/209 (16%), Positives = 67/209 (32%), Gaps = 22/209 (10%)

Query: 3   IVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSS 62
            ++TG + G+G   A+ LA  G  VV+  R++    +  + + ++    +  A   D+S+
Sbjct: 8   ALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYG-VETMAFRCDVSN 66

Query: 63  LASVRNFASEYNIQHHQLNILINNAGIMG-TPFMLSKDNIELQFATNHLGHFLLTNLLLD 121
              V+        +  +L+ ++N AGI    P      +   Q    +L           
Sbjct: 67  YEEVKKLLEAVKEKFGKLDTVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYVCREAF 126

Query: 122 TMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANILHAN 181
           ++ + +              E                          Y+ SK        
Sbjct: 127 SLLRESDNPSIINIGSLTVEEVTMPNISA------------------YAASKGGVASLTK 168

Query: 182 ELARRLKEDGVDITANSVHPGAIATNIIR 210
            LA+     G  I  N + PG   T +  
Sbjct: 169 ALAKEWGRYG--IRVNVIAPGWYRTKMTE 195

>d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} Length = 251

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

 Score = 83.9 bits (207), Expect = 5e-20
 Identities = 55/211 (26%), Positives = 84/211 (39%), Gaps = 22/211 (10%)

Query: 3   IVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSS 62
            ++TGA  GIG E A++LA    HV+   R   +   V + I       +      D+S 
Sbjct: 13  ALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSF--GYESSGYAGDVSK 70

Query: 63  LASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDT 122
              +    ++   +H  ++IL+NNAGI      L   N E +     L   L +   +  
Sbjct: 71  KEEISEVINKILTEHKNVDILVNNAGITRDNLFLRMKNDEWED---VLRTNLNSLFYITQ 127

Query: 123 MKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANILHANE 182
                  +   GRIIN+SS               I   +G  G   YS SK   I     
Sbjct: 128 PISKRMINNRYGRIINISS---------------IVGLTGNVGQANYSSSKAGVIGFTKS 172

Query: 183 LARRLKEDGVDITANSVHPGAIATNIIRHNS 213
           LA+ L      IT N++ PG I++++    S
Sbjct: 173 LAKELASRN--ITVNAIAPGFISSDMTDKIS 201

>d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sepiapterin reductase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 82.9 bits (204), Expect = 1e-19
 Identities = 44/221 (19%), Positives = 74/221 (33%), Gaps = 34/221 (15%)

Query: 3   IVITGATSGIGTETARVLA---LRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELD 59
            V+TGA+ G G   A  LA     G  +++  R  +  + +KE +  + P  KV     D
Sbjct: 9   CVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDLKVVLAAAD 68

Query: 60  LSSLASVRNFASEY----NIQHHQLNILINNAGIMGTPFM-----LSKDNIELQFATNHL 110
           L + A V+   S        +  Q  +LINNA  +G              +   +A N  
Sbjct: 69  LGTEAGVQRLLSAVRELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWALNLT 128

Query: 111 GHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYS 170
               LT+  L+  + +   S                     +    +     Y G+  Y 
Sbjct: 129 SMLCLTSGTLNAFQDSPGLSKTV------------------VNISSLCALQPYKGWGLYC 170

Query: 171 QSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH 211
             K A  +    LA         +   S  PG +  ++ + 
Sbjct: 171 AGKAARDMLYQVLAAEEP----SVRVLSYAPGPLDNDMQQL 207

>d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]} Length = 255

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 7-alpha-hydroxysteroid dehydrogenase
species: Escherichia coli [TaxId: 562]

 Score = 82.8 bits (204), Expect = 1e-19
 Identities = 48/210 (22%), Positives = 79/210 (37%), Gaps = 25/210 (11%)

Query: 3   IVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSS 62
            +ITGA +GIG E A   A  G  VV+   +  A   V + I +     +  A   D++S
Sbjct: 14  AIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQL--GGQAFACRCDITS 71

Query: 63  LASVRNFASEYNIQHHQLNILINNAGIMG-TPFMLSKDNIELQFATNHLGHFLLTNLLLD 121
              +   A     +  +++IL+NNAG  G  PF +   +    +  N    F L+ L+  
Sbjct: 72  EQELSALADFAISKLGKVDILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAP 131

Query: 122 TMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANILHAN 181
            M                     +      +    +   +      +Y+ SK A      
Sbjct: 132 EM--------------------EKNGGGVILTITSMAAENKNINMTSYASSKAAASHLVR 171

Query: 182 ELARRLKEDGVDITANSVHPGAIATNIIRH 211
            +A  L E    I  N + PGAI T+ ++ 
Sbjct: 172 NMAFDLGEKN--IRVNGIAPGAILTDALKS 199

>d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]} Length = 294

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR)
species: Human (Homo sapiens), [TaxId: 9606]

 Score = 82.5 bits (203), Expect = 3e-19
 Identities = 41/209 (19%), Positives = 72/209 (34%), Gaps = 20/209 (9%)

Query: 3   IVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSS 62
             ITG  +G+G     +L+  G   V+  R +   K   E I  +  + KV A++ D+  
Sbjct: 28  AFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTGN-KVHAIQCDVRD 86

Query: 63  LASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDT 122
              V+N  SE        NI+INNA   G     ++      + T        T  +   
Sbjct: 87  PDMVQNTVSELIKVAGHPNIVINNA--AGNFISPTERLSPNAWKTITDIVLNGTAFVTLE 144

Query: 123 MKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANILHANE 182
           + K   K+      +++++                   +G       + +K      +  
Sbjct: 145 IGKQLIKAQKGAAFLSITTIYAE---------------TGSGFVVPSASAKAGVEAMSKS 189

Query: 183 LARRLKEDGVDITANSVHPGAIATNIIRH 211
           LA    + G  +  N + PG I T     
Sbjct: 190 LAAEWGKYG--MRFNVIQPGPIKTKGAFS 216

>d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]} Length = 244

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative oxidoreductase Rv2002
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score = 80.9 bits (199), Expect = 5e-19
 Identities = 46/211 (21%), Positives = 74/211 (35%), Gaps = 29/211 (13%)

Query: 3   IVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSS 62
            +++G   G+G    R +   G  VV G      GK +   +     +     + LD++ 
Sbjct: 9   ALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAEL-----ADAARYVHLDVTQ 63

Query: 63  LASVRNFASEYNIQHHQLNILINNAGIMGTPFML--SKDNIELQFATNHLGHFLLTNLLL 120
            A  +            L++L+NNAGI+    +   +    +     N  G FL    ++
Sbjct: 64  PAQWKAAVDTAVTAFGGLHVLVNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGIRAVV 123

Query: 121 DTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANILHA 180
             MK+      G G IIN+SS                           Y+ +K A     
Sbjct: 124 KPMKE-----AGRGSIINISSIEGLAGTVACH---------------GYTATKFAVRGLT 163

Query: 181 NELARRLKEDGVDITANSVHPGAIATNIIRH 211
              A  L   G  I  NS+HPG + T +   
Sbjct: 164 KSTALELGPSG--IRVNSIHPGLVKTPMTDW 192

>d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]} Length = 260

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: D(-)-3-hydroxybutyrate dehydrogenase
species: Pseudomonas fragi [TaxId: 296]

 Score = 81.0 bits (199), Expect = 6e-19
 Identities = 56/211 (26%), Positives = 78/211 (36%), Gaps = 24/211 (11%)

Query: 3   IVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSS 62
            V+TG+TSGIG   A  LA +G  +V+     AA  +     +      KV     DLS 
Sbjct: 7   AVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLSK 66

Query: 63  LASVRNFASEYNIQHHQLNILINNAGIM--GTPFMLSKDNIELQFATNHLGHFLLTNLLL 120
             +VR        Q  +++IL+NNAGI           +  +   A N    F  T   L
Sbjct: 67  GEAVRGLVDNAVRQMGRIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTAAAL 126

Query: 121 DTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANILHA 180
             MKK      G GRIIN                   +         AY  +K   +   
Sbjct: 127 PHMKK-----QGFGRIIN---------------IASAHGLVASANKSAYVAAKHGVVGFT 166

Query: 181 NELARRLKEDGVDITANSVHPGAIATNIIRH 211
              A      G  ITAN++ PG + T ++  
Sbjct: 167 KVTALETAGQG--ITANAICPGWVRTPLVEK 195

>d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]} Length = 244

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

 Score = 80.5 bits (198), Expect = 7e-19
 Identities = 49/213 (23%), Positives = 78/213 (36%), Gaps = 29/213 (13%)

Query: 3   IVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSA--KVDAMELDL 60
           +V+TGA+ GIG   A  L   G  V++            E + K+I +   +      D+
Sbjct: 4   VVVTGASRGIGKAIALSLGKAGCKVLVNYAR---SAKAAEEVSKQIEAYGGQAITFGGDV 60

Query: 61  SSLASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQFATN--HLGHFLLTNL 118
           S  A V             +++++NNAGI     ++     +     +    G FL T  
Sbjct: 61  SKEADVEAMMKTAIDAWGTIDVVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQA 120

Query: 119 LLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANIL 178
               M K       +GRIIN++S               +    G  G   Y+ +K   I 
Sbjct: 121 ATKIMMK-----KRKGRIINIAS---------------VVGLIGNIGQANYAAAKAGVIG 160

Query: 179 HANELARRLKEDGVDITANSVHPGAIATNIIRH 211
            +   AR        I  N V PG IA+++   
Sbjct: 161 FSKTAAREGASRN--INVNVVCPGFIASDMTAK 191

>d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Length = 248

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase sniffer
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

 Score = 77.8 bits (190), Expect = 9e-18
 Identities = 44/216 (20%), Positives = 75/216 (34%), Gaps = 15/216 (6%)

Query: 3   IVITGATSGIGTETARVL---ALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELD 59
           I+ITG   G+G    + L        H+    R+    K++++ + K   +  +  ++L 
Sbjct: 5   ILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELED-LAKNHSNIHILEIDLR 63

Query: 60  LSSLASVRNFASEYNIQHHQLNILINNAGIM---GTPFMLSKDNIELQFATNHLGHFLLT 116
                       E   +   LN+L NNAGI         +    +     TN +   +L 
Sbjct: 64  NFDAYDKLVADIEGVTKDQGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPIMLA 123

Query: 117 NLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLAN 176
              L  +KK A+ +       +      R A             +   G  AY  SK A 
Sbjct: 124 KACLPLLKKAAKAN------ESQPMGVGRAAIINMSSILGSIQGNTDGGMYAYRTSKSAL 177

Query: 177 ILHANELARRLKEDGVDITANSVHPGAIATNIIRHN 212
                 L+  L      I   S+HPG + T++   +
Sbjct: 178 NAATKSLSVDLYPQR--IMCVSLHPGWVKTDMGGSS 211

>d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]} Length = 260

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Xylitol dehydrogenase
species: Gluconobacter oxydans [TaxId: 442]

 Score = 77.1 bits (189), Expect = 2e-17
 Identities = 38/210 (18%), Positives = 72/210 (34%), Gaps = 21/210 (10%)

Query: 3   IVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSS 62
            ++TGA   IG  TA  LA  G  + +   +  A +  + ++ ++    +  +   D++S
Sbjct: 8   CLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREK--GVEARSYVCDVTS 65

Query: 63  LASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDT 122
             +V            +++ L NNAG  G    +     +       +      ++L   
Sbjct: 66  EEAVIGTVDSVVRDFGKIDFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVLKAV 125

Query: 123 MKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANILHANE 182
            ++   ++   GRI+N +S                          AY  SK A I     
Sbjct: 126 SRQMITQN--YGRIVNTASMAGVKGPPNMA---------------AYGTSKGAIIALTET 168

Query: 183 LARRLKEDGVDITANSVHPGAIATNIIRHN 212
            A  L      I  N++ PG +    +   
Sbjct: 169 AALDLAPYN--IRVNAISPGYMGPGFMWER 196

>d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]} Length = 261

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase
species: Bacillus megaterium [TaxId: 1404]

 Score = 77.1 bits (189), Expect = 2e-17
 Identities = 47/212 (22%), Positives = 82/212 (38%), Gaps = 28/212 (13%)

Query: 3   IVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSA--KVDAMELDL 60
           +VITG+++G+G   A   A     VV+  R     +D   ++++EI     +  A++ D+
Sbjct: 10  VVITGSSTGLGKSMAIRFATEKAKVVVNYRS---KEDEANSVLEEIKKVGGEAIAVKGDV 66

Query: 61  SSLASVRNFASEYNIQHHQLNILINNAGIM--GTPFMLSKDNIELQFATNHLGHFLLTNL 118
           +  + V N       +  +L+++INNAG+    +   +S  +      TN  G FL +  
Sbjct: 67  TVESDVINLVQSAIKEFGKLDVMINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFLGSRE 126

Query: 119 LLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANIL 178
            +                               I    +++   +  F  Y+ SK    L
Sbjct: 127 AIKYFV-------------------ENDIKGTVINMSSVHEKIPWPLFVHYAASKGGMKL 167

Query: 179 HANELARRLKEDGVDITANSVHPGAIATNIIR 210
               LA      G  I  N++ PGAI T I  
Sbjct: 168 MTETLALEYAPKG--IRVNNIGPGAINTPINA 197

>d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 236

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 75.6 bits (185), Expect = 5e-17
 Identities = 24/212 (11%), Positives = 66/212 (31%), Gaps = 35/212 (16%)

Query: 3   IVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSS 62
           +++ G    +G+   +    R   V     D+   ++   +++ ++  +  +  +   + 
Sbjct: 5   VLVYGGRGALGSRCVQAFRARNWWVA--SIDVVENEEASASVIVKMTDSFTEQADQVTAE 62

Query: 63  LASVRNFASEYNIQHHQLNILINNAGIMGTPFML---SKDNIELQFATNHLGHFLLTNLL 119
           +  +        +   +++ ++  AG              N +L +  +     + ++L 
Sbjct: 63  VGKL--------LGDQKVDAILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLA 114

Query: 120 LDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANILH 179
              +K+        G +    ++                   G  G   Y  +K A    
Sbjct: 115 TKHLKEG-------GLLTLAGAKAAL---------------DGTPGMIGYGMAKGAVHQL 152

Query: 180 ANELARRLKEDGVDITANSVHPGAIATNIIRH 211
              LA +         A +V P  + T + R 
Sbjct: 153 CQSLAGKNSGMPSGAAAIAVLPVTLDTPMNRK 184

>d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]} Length = 241

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Thermus thermophilus [TaxId: 274]

 Score = 75.6 bits (185), Expect = 5e-17
 Identities = 43/215 (20%), Positives = 69/215 (32%), Gaps = 37/215 (17%)

Query: 3   IVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSS 62
            ++TG  SG+G   A  L  RG  VV+                       +  +E D++ 
Sbjct: 4   ALVTGGASGLGRAAALALKARGYRVVVLDLRREGE--------------DLIYVEGDVTR 49

Query: 63  LASVRNFASEYNIQHHQLNILINN-----AGIMGTPFMLSKDNIELQFATNHLGHFLLTN 117
              VR   +    +     ++          I+G       ++       N LG F +  
Sbjct: 50  EEDVRRAVARAQEEAPLFAVVSAAGVGLAEKILGKEGPHGLESFRRVLEVNLLGTFNVLR 109

Query: 118 LLLDTMKK-TARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLAN 176
           L    M++      G  G I+N +S                    G  G  AY+ SK   
Sbjct: 110 LAAWAMRENPPDAEGQRGVIVNTASVAAFE---------------GQIGQAAYAASKGGV 154

Query: 177 ILHANELARRLKEDGVDITANSVHPGAIATNIIRH 211
           +      AR L   G  I   +V PG   T +++ 
Sbjct: 155 VALTLPAARELAGWG--IRVVTVAPGLFDTPLLQG 187

>d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]} Length = 257

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Streptomyces coelicolor [TaxId: 1902]

 Score = 75.1 bits (184), Expect = 8e-17
 Identities = 47/207 (22%), Positives = 79/207 (38%), Gaps = 20/207 (9%)

Query: 4   VITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSL 63
           ++TGATSGIG E AR L   G+ V +  R     +   + + +     + D    D+ S+
Sbjct: 6   LVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREA--GVEADGRTCDVRSV 63

Query: 64  ASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTM 123
             +    +    ++  +++L+NNAG        ++   EL           +  +    +
Sbjct: 64  PEIEALVAAVVERYGPVDVLVNNAGRP-GGGATAELADELWLDVVETNLTGVFRVTKQVL 122

Query: 124 KKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANILHANEL 183
           K       G GRI+N++S G +                       YS SK   +     L
Sbjct: 123 KAGGMLERGTGRIVNIASTGGKQGVVH---------------AAPYSASKHGVVGFTKAL 167

Query: 184 ARRLKEDGVDITANSVHPGAIATNIIR 210
              L   G  IT N+V PG + T +  
Sbjct: 168 GLELARTG--ITVNAVCPGFVETPMAA 192

>d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]} Length = 245

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dehydrogenase/reductase SDR family member 6, DHRS6
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 74.4 bits (182), Expect = 2e-16
 Identities = 42/211 (19%), Positives = 76/211 (36%), Gaps = 34/211 (16%)

Query: 3   IVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSS 62
           I++T A  GIG   A   A  G  V+    + +  ++     +++ P  +   ++     
Sbjct: 9   IILTAAAQGIGQAAALAFAREGAKVIATDINESKLQE-----LEKYPGIQTRVLD----- 58

Query: 63  LASVRNFASEYNIQHHQLNILINNAGI--MGTPFMLSKDNIELQFATNHLGHFLLTNLLL 120
             + +    ++  +  +L++L N AG    GT     + + +     N    +L+    L
Sbjct: 59  -VTKKKQIDQFANEVERLDVLFNVAGFVHHGTVLDCEEKDWDFSMNLNVRSMYLMIKAFL 117

Query: 121 DTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANILHA 180
             M          G IIN+SS    +               G      YS +K A I   
Sbjct: 118 PKMLA-----QKSGNIINMSSVASSVK--------------GVVNRCVYSTTKAAVIGLT 158

Query: 181 NELARRLKEDGVDITANSVHPGAIATNIIRH 211
             +A    + G  I  N V PG + T  ++ 
Sbjct: 159 KSVAADFIQQG--IRCNCVCPGTVDTPSLQE 187

>d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]} Length = 243

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Escherichia coli [TaxId: 562]

 Score = 74.0 bits (181), Expect = 2e-16
 Identities = 54/213 (25%), Positives = 88/213 (41%), Gaps = 29/213 (13%)

Query: 3   IVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSS 62
            ++TGA+ GIG   A  LA RG  V+         + + + +      A    + L+++ 
Sbjct: 7   ALVTGASRGIGRAIAETLAARGAKVIGTATSENGAQAISDYL-----GANGKGLMLNVTD 61

Query: 63  LASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQF--ATNHLGHFLLTNLLL 120
            AS+ +   +   +  +++IL+NNAGI     ++   + E      TN    F L+  ++
Sbjct: 62  PASIESVLEKIRAEFGEVDILVNNAGITRDNLLMRMKDEEWNDIIETNLSSVFRLSKAVM 121

Query: 121 DTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANILHA 180
             M K        GRII + S    +               G  G   Y+ +K   I  +
Sbjct: 122 RAMMK-----KRHGRIITIGSVVGTM---------------GNGGQANYAAAKAGLIGFS 161

Query: 181 NELARRLKEDGVDITANSVHPGAIATNIIRHNS 213
             LAR +   G  IT N V PG I T++ R  S
Sbjct: 162 KSLAREVASRG--ITVNVVAPGFIETDMTRALS 192

>d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]} Length = 241

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus, TTHB020 [TaxId: 274]

 Score = 73.6 bits (180), Expect = 2e-16
 Identities = 39/209 (18%), Positives = 67/209 (32%), Gaps = 28/209 (13%)

Query: 3   IVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSS 62
           I++TGA SGIG     + A  G  +V   R+     +    +      A+  A+  D+S 
Sbjct: 8   ILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAAL-----EAEAIAVVADVSD 62

Query: 63  LASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDT 122
             +V    +E   +  +L+ + + AG+  +    +      +                  
Sbjct: 63  PKAVEAVFAEALEEFGRLHGVAHFAGVAHSALSWNLPLEAWEKVLRVNLT---------- 112

Query: 123 MKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANILHANE 182
                      G  +     G  L     +         G  G   Y+  KL  +  A  
Sbjct: 113 -----------GSFLVARKAGEVLEEGGSLVLTGSVAGLGAFGLAHYAAGKLGVVGLART 161

Query: 183 LARRLKEDGVDITANSVHPGAIATNIIRH 211
           LA  L   G  +  N + PG I T +   
Sbjct: 162 LALELARKG--VRVNVLLPGLIQTPMTAG 188

>d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} Length = 272

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase)
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

 Score = 72.8 bits (178), Expect = 8e-16
 Identities = 44/213 (20%), Positives = 75/213 (35%), Gaps = 32/213 (15%)

Query: 3   IVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSA--KVDAMELDL 60
            ++TGA  GIG E A  L  RG  V++   +     +  E +V  I         ++ ++
Sbjct: 21  ALVTGAGRGIGREMAMELGRRGCKVIVNYAN---STESAEEVVAAIKKNGSDAACVKANV 77

Query: 61  SSLASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQ--FATNHLGHFLLTNL 118
             +  +     E      +L+I+ +N+G++    +      E    F  N  G F     
Sbjct: 78  GVVEDIVRMFEEAVKIFGKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQF----- 132

Query: 119 LLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAY-SQSKLANI 177
                ++  +     GR+I                   I   +      A  S SK A  
Sbjct: 133 --FVAREAYKHLEIGGRLIL---------------MGSITGQAKAVPKHAVYSGSKGAIE 175

Query: 178 LHANELARRLKEDGVDITANSVHPGAIATNIIR 210
             A  +A  + +    IT N V PG I T++  
Sbjct: 176 TFARCMAIDMADKK--ITVNVVAPGGIKTDMYH 206

>d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]} Length = 255

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: meso-2,3-butanediol dehydrogenase
species: Klebsiella pneumoniae [TaxId: 573]

 Score = 71.8 bits (175), Expect = 1e-15
 Identities = 43/210 (20%), Positives = 68/210 (32%), Gaps = 25/210 (11%)

Query: 4   VITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSL 63
           ++TGA  GIG   A  L   G  V +   + A  K V   I +        A+++D+S  
Sbjct: 5   LVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQA--GGHAVAVKVDVSDR 62

Query: 64  ASVRNFASEYNIQHHQLNILINNAG--IMGTPFMLSKDNIELQFATNHLGHFLLTNLLLD 121
             V     +        ++++NNAG         ++ + ++  +  N  G        ++
Sbjct: 63  DQVFAAVEQARKTLGGFDVIVNNAGVAPSTPIESITPEIVDKVYNINVKGVIWGIQAAVE 122

Query: 122 TMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANILHAN 181
             KK                        + I         G      YS SK A      
Sbjct: 123 AFKKEGH-------------------GGKIINACSQAGHVGNPELAVYSSSKFAVRGLTQ 163

Query: 182 ELARRLKEDGVDITANSVHPGAIATNIIRH 211
             AR L   G  IT N   PG + T +   
Sbjct: 164 TAARDLAPLG--ITVNGYCPGIVKTPMWAE 191

>d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]} Length = 237

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score = 70.9 bits (173), Expect = 2e-15
 Identities = 43/208 (20%), Positives = 74/208 (35%), Gaps = 33/208 (15%)

Query: 3   IVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSS 62
           +++TG   GIG   A+ LA  G  V +  R   A K +               +E+D++ 
Sbjct: 10  VLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAPKGLF-------------GVEVDVTD 56

Query: 63  LASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDT 122
             +V    +        + +L++NAG+    F++     + +   N              
Sbjct: 57  SDAVDRAFTAVEEHQGPVEVLVSNAGLSADAFLMRMTEEKFEKVINANLTGAFRV---AQ 113

Query: 123 MKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANILHANE 182
               + +    GR+I + S                           Y+ SK   I  A  
Sbjct: 114 RASRSMQRNKFGRMIFIGSVSGLWGIGNQA---------------NYAASKAGVIGMARS 158

Query: 183 LARRLKEDGVDITANSVHPGAIATNIIR 210
           +AR L +    +TAN V PG I T++ R
Sbjct: 159 IARELSKAN--VTANVVAPGYIDTDMTR 184

>d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} Length = 248

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 69.2 bits (168), Expect = 1e-14
 Identities = 44/213 (20%), Positives = 68/213 (31%), Gaps = 21/213 (9%)

Query: 3   IVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSS 62
            VITG  SG+G  TA  L  +G   V+     + G+   + +      A  D        
Sbjct: 8   AVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKLGNNCVFAPADVTSEKDVQ 67

Query: 63  LASVRNFASEYNIQHHQLNILINNAG---IMGTPFMLSKDNIELQFATNHLGHFLLTNLL 119
            A          +        I  A     +      + ++ +     N +G F +  L+
Sbjct: 68  TALALAKGKFGRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVIRLV 127

Query: 120 LDTMKKTARKSG-GEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANIL 178
              M +     G   G IIN +S                    G  G  AYS SK   + 
Sbjct: 128 AGEMGQNEPDQGGQRGVIINTASVAAFE---------------GQVGQAAYSASKGGIVG 172

Query: 179 HANELARRLKEDGVDITANSVHPGAIATNIIRH 211
               +AR L   G  I   ++ PG   T ++  
Sbjct: 173 MTLPIARDLAPIG--IRVMTIAPGLFGTPLLTS 203

>d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 235

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

 Score = 68.7 bits (167), Expect = 1e-14
 Identities = 26/209 (12%), Positives = 55/209 (26%), Gaps = 29/209 (13%)

Query: 3   IVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSS 62
           +++ G    +G+         G  V+    D++A       I+ +      +  +  L  
Sbjct: 5   VIVYGGKGALGSAILEFFKKNGYTVL--NIDLSANDQADSNILVDGNKNWTEQEQSILEQ 62

Query: 63  LASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDT 122
            AS         +Q  Q++ +   AG        SKD ++          +         
Sbjct: 63  TASS--------LQGSQVDGVFCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLA 114

Query: 123 MKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANILHANE 182
                        +    +          I                Y  +K A     + 
Sbjct: 115 TTHLKPGG----LLQLTGAAAAMGPTPSMIG---------------YGMAKAAVHHLTSS 155

Query: 183 LARRLKEDGVDITANSVHPGAIATNIIRH 211
           LA +      +    ++ P  + T + R 
Sbjct: 156 LAAKDSGLPDNSAVLTIMPVTLDTPMNRK 184

>d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]} Length = 258

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), I [TaxId: 4076]

 Score = 67.1 bits (163), Expect = 6e-14
 Identities = 49/211 (23%), Positives = 77/211 (36%), Gaps = 27/211 (12%)

Query: 3   IVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSS 62
            ++TG + GIG      LA  G  V    R+     +  E   ++     V+    DL S
Sbjct: 9   ALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREK--GLNVEGSVCDLLS 66

Query: 63  LASVRNFASE-YNIQHHQLNILINNAGIMG-TPFM-LSKDNIELQFATNHLGHFLLTNLL 119
                       ++   +LNIL+NNAG++        ++ +  +   TN    + L+   
Sbjct: 67  RTERDKLMQTVAHVFDGKLNILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAYHLSQ-- 124

Query: 120 LDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANILH 179
              +     K+   G +I +SS               I   S       YS SK A    
Sbjct: 125 ---IAYPLLKASQNGNVIFLSS---------------IAGFSALPSVSLYSASKGAINQM 166

Query: 180 ANELARRLKEDGVDITANSVHPGAIATNIIR 210
              LA    +D  +I  NSV PG I T ++ 
Sbjct: 167 TKSLACEWAKD--NIRVNSVAPGVILTPLVE 195

>d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]} Length = 256

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sorbitol dehydrogenase
species: Rhodobacter sphaeroides [TaxId: 1063]

 Score = 66.4 bits (161), Expect = 1e-13
 Identities = 39/213 (18%), Positives = 71/213 (33%), Gaps = 34/213 (15%)

Query: 3   IVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSS 62
            +ITG+  GIG   A      G  V +   ++ A +     I          A+ LD++ 
Sbjct: 8   ALITGSARGIGRAFAEAYVREGARVAIADINLEAARATAAEI-----GPAACAIALDVTD 62

Query: 63  LASVRNFASEYNIQHHQLNILINNAGIM--GTPFMLSKDNIELQFATNHLGHFLLTNLLL 120
            AS+    +E   +   ++IL+NNA +        +++++ +  FA N  G         
Sbjct: 63  QASIDRCVAELLDRWGSIDILVNNAALFDLAPIVEITRESYDRLFAINVSGTLF------ 116

Query: 121 DTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYS---QSKLANI 177
                           +  +     +A   G +   +   +G  G         +K A I
Sbjct: 117 ----------------MMQAVARAMIAGGRGGKIINMASQAGRRGEALVGVYCATKAAVI 160

Query: 178 LHANELARRLKEDGVDITANSVHPGAIATNIIR 210
                    L   G  I  N++ PG +      
Sbjct: 161 SLTQSAGLNLIRHG--INVNAIAPGVVDGEHWD 191

>d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]} Length = 266

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Trypanosoma cruzi [TaxId: 5693]

 Score = 63.7 bits (154), Expect = 1e-12
 Identities = 38/214 (17%), Positives = 63/214 (29%), Gaps = 22/214 (10%)

Query: 4   VITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDA-------M 56
           VITG    IG   A  L  +G  VV+  R     +   + +V E+ +A+  +       +
Sbjct: 5   VITGGARRIGHSIAVRLHQQGFRVVVHYRH---SEGAAQRLVAELNAARAGSAVLCKGDL 61

Query: 57  ELDLSSLASVRNFASEYNIQHHQLNILINNAGIMG----TPFMLSKDNIELQFATNHLGH 112
            L  S L    +          + ++L+NNA         P   +    + +     +  
Sbjct: 62  SLSSSLLDCCEDIIDCSFRAFGRCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQVAE 121

Query: 113 FLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQS 172
              +N +       A                 R      +            GF  Y+ +
Sbjct: 122 LFGSNAVAPLFLIRAF------ARRQGEGGAWRSRNLSVVNLCDAMTDLPLPGFCVYTMA 175

Query: 173 KLANILHANELARRLKEDGVDITANSVHPGAIAT 206
           K A        A  L      I  N+V PG    
Sbjct: 176 KHALGGLTRAAALELAPRH--IRVNAVAPGLSLL 207

>d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]} Length = 258

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Escherichia coli [TaxId: 562]

 Score = 60.3 bits (145), Expect = 2e-11
 Identities = 29/224 (12%), Positives = 67/224 (29%), Gaps = 22/224 (9%)

Query: 3   IVITGATS--GIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDL 60
           I++TG  S   I    A+ +   G  +    ++      V+E             ++ D+
Sbjct: 8   ILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEF---AAQLGSDIVLQCDV 64

Query: 61  SSLASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLL 120
           +  AS+    +E      + +  +++ G      +       +      + H + +   +
Sbjct: 65  AEDASIDTMFAELGKVWPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFV 124

Query: 121 DTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANILHA 180
              K           ++ +S  G                      +     +K +   + 
Sbjct: 125 AMAKACRSMLNPGSALLTLSYLGAE---------------RAIPNYNVMGLAKASLEANV 169

Query: 181 NELARRLKEDGVDITANSVHPGAIATNIIRHNSLFRSMNTILHA 224
             +A  +  +G  +  N++  G I T        FR M     A
Sbjct: 170 RYMANAMGPEG--VRVNAISAGPIRTLAASGIKDFRKMLAHCEA 211

>d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]} Length = 234

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermotoga maritima [TaxId: 2336]

 Score = 59.7 bits (144), Expect = 2e-11
 Identities = 33/211 (15%), Positives = 61/211 (28%), Gaps = 41/211 (19%)

Query: 3   IVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSS 62
           +++  A+ GIG   A VL+  G  V +  R+    K      V                 
Sbjct: 7   VLVLAASRGIGRAVADVLSQEGAEVTICARNEELLKRSGHRYVV---------------- 50

Query: 63  LASVRNFASEYNIQHHQLNILINNA--GIMGTPFMLSKDNIELQFATNHLGHFLLTNLLL 120
              +R        +  +++IL+ NA     G    L+ ++ +    +  L          
Sbjct: 51  -CDLRKDLDLLFEKVKEVDILVLNAGGPKAGFFDELTNEDFKEAIDSLFLNMI------- 102

Query: 121 DTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANILHA 180
                         R    + +         I    +  P           +++A     
Sbjct: 103 -----------KIVRNYLPAMKEKGWGRIVAITSFSVISPIENLYTSNS--ARMALTGFL 149

Query: 181 NELARRLKEDGVDITANSVHPGAIATNIIRH 211
             L+  +   G  IT N V PG   T  ++ 
Sbjct: 150 KTLSFEVAPYG--ITVNCVAPGWTETERVKE 178

>d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]} Length = 256

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Thermus thermophilus [TaxId: 274]

 Score = 56.0 bits (134), Expect = 4e-10
 Identities = 24/207 (11%), Positives = 54/207 (26%), Gaps = 33/207 (15%)

Query: 3   IVITGATS--GIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDL 60
            ++ G T+   +G   A  L   G  V +  +      + ++       +    A     
Sbjct: 11  ALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAERLRPEAEKLAEALGGALLFRADVTQ- 69

Query: 61  SSLASVRNFASEYNIQHHQLNILINNA------GIMGTPFMLSKDNIELQFATNHLGHFL 114
                +    +        L+ L++         + G      + +  L    +      
Sbjct: 70  --DEELDALFAGVKEAFGGLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVA 127

Query: 115 LTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKL 174
           +       +++        G I+ ++                         +   + +K 
Sbjct: 128 VARRAEPLLREG-------GGIVTLTYYASE---------------KVVPKYNVMAIAKA 165

Query: 175 ANILHANELARRLKEDGVDITANSVHP 201
           A       LA  L   GV + A S  P
Sbjct: 166 ALEASVRYLAYELGPKGVRVNAISAGP 192

>d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} Length = 361

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

 Score = 55.5 bits (133), Expect = 1e-09
 Identities = 33/219 (15%), Positives = 67/219 (30%), Gaps = 21/219 (9%)

Query: 1   MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDL 60
           M I+ITG    IG+   R +       V+ +  +    +  E++     S + +    D+
Sbjct: 1   MKILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGN-LESLSDISESNRYNFEHADI 59

Query: 61  SSLASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLL 120
              A +         + +Q + +++ A         S         TN +G + L  +  
Sbjct: 60  CDSAEITRI-----FEQYQPDAVMHLAAESHVD--RSITGPAAFIETNIVGTYALLEVAR 112

Query: 121 DTMKKTARKSGGEGRIINVSSE------GHRLAYHEGIRFDKINDPSGYNGFRAYSQSKL 174
                         R  ++S++       H       +      + + Y     YS SK 
Sbjct: 113 KYWSALGEDKKNNFRFHHISTDEVYGDLPHPDEVENSVTLPLFTETTAYAPSSPYSASKA 172

Query: 175 ANILHANELARRLKEDGVDITA----NSVHPGAIATNII 209
           ++        R     G+        N+  P      +I
Sbjct: 173 SSDHLVRAWRR---TYGLPTIVTNCSNNYGPYHFPEKLI 208

>d1fjha_ c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} Length = 257

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha-hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

 Score = 51.8 bits (123), Expect = 1e-08
 Identities = 21/89 (23%), Positives = 36/89 (40%), Gaps = 20/89 (22%)

Query: 3  IVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSS 62
          IVI+G  +GIG  T +VL   G  +V                      A+V A   DLS+
Sbjct: 4  IVISGCATGIGAATRKVLEAAGHQIVGIDIR----------------DAEVIA---DLST 44

Query: 63 LASVRNFASEYNIQHHQ-LNILINNAGIM 90
              +   ++   +  + ++ L+  AG+ 
Sbjct: 45 AEGRKQAIADVLAKCSKGMDGLVLCAGLG 73

>d1e7wa_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Leishmania major [TaxId: 5664]} Length = 284

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Leishmania major [TaxId: 5664]

 Score = 49.3 bits (116), Expect = 1e-07
 Identities = 17/140 (12%), Positives = 35/140 (25%), Gaps = 24/140 (17%)

Query: 4   VITGATSGIGTETARVLALRGVHVVM-GVRDIAAGKDVKETIVKEIPS------------ 50
           ++TGA   +G   A  L   G  V +   R  A    +  T+    P+            
Sbjct: 6   LVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSNV 65

Query: 51  ----AKVDAMELDLSSLASVRNFASEYNIQHHQLNILINNAGIMG-------TPFMLSKD 99
                        ++         +       + ++L+NNA                   
Sbjct: 66  ATAPVSGADGSAPVTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPC 125

Query: 100 NIELQFATNHLGHFLLTNLL 119
             + +           +N +
Sbjct: 126 VGDREAMETATADLFGSNAI 145

>d1jaya_ c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} Length = 212

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Coenzyme F420H2:NADP+ oxidoreductase (FNO)
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

 Score = 48.1 bits (113), Expect = 2e-07
 Identities = 12/53 (22%), Positives = 20/53 (37%)

Query: 1  MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKV 53
          M + + G T  +G   A  LA  G  +V+G R     +       +    A +
Sbjct: 1  MRVALLGGTGNLGKGLALRLATLGHEIVVGSRREEKAEAKAAEYRRIAGDASI 53

>d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]} Length = 338

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Escherichia coli [TaxId: 562]

 Score = 47.7 bits (112), Expect = 4e-07
 Identities = 40/243 (16%), Positives = 81/243 (33%), Gaps = 24/243 (9%)

Query: 1   MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDL 60
           M +++TG +  IG+ T   L   G H V+ + ++   K     +++ +       +E D+
Sbjct: 1   MRVLVTGGSGYIGSHTCVQLLQNG-HDVIILDNLCNSKRSVLPVIERLGGKHPTFVEGDI 59

Query: 61  SSLASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLL 120
            + A +     ++ I     + +I+ AG+       S       +  N  G    T  L+
Sbjct: 60  RNEALMTEILHDHAI-----DTVIHFAGLKAVG--ESVQKPLEYYDNNVNG----TLRLI 108

Query: 121 DTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANILHA 180
             M+    K       I  S       Y +  +   +           Y +SKL      
Sbjct: 109 SAMRAANVK-----NFIFSS---SATVYGDQPKIPYVESFPTGTPQSPYGKSKLMVEQIL 160

Query: 181 NELARRLKEDGVDITANSVHPGAIATNIIRHNSLFRSMNTILHALPGIAGKCLLKNVQQV 240
            +L +   +  + +       GA  +  +  +      N +    P IA   + +     
Sbjct: 161 TDLQKAQPDWSIALLRYFNPVGAHPSGDMGEDPQGIPNNLM----PYIAQVAVGRRDSLA 216

Query: 241 ILN 243
           I  
Sbjct: 217 IFG 219

>d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Erythromycin synthase, eryAI, 1st ketoreductase module
species: Saccharopolyspora erythraea [TaxId: 1836]

 Score = 46.5 bits (109), Expect = 8e-07
 Identities = 31/204 (15%), Positives = 51/204 (25%), Gaps = 27/204 (13%)

Query: 3   IVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSS 62
           +++TG T G+G + AR LA RG   ++ V       D    +V E+ +            
Sbjct: 12  VLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEALGARTTVAACDV 71

Query: 63  LASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDT 122
                       I        + +A        +     E     +        NL   T
Sbjct: 72  TDRESVRELLGGIGDDVPLSAVFHAAATLDDGTVDTLTGERIERASRAKVLGARNLHELT 131

Query: 123 MKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANILHANE 182
            +            +  SS                    G  G   Y+         A +
Sbjct: 132 REL------DLTAFVLFSSFASAF---------------GAPGLGGYAPGNAYLDGLAQQ 170

Query: 183 LARRLKEDGVDITANSVHPGAIAT 206
                      + A +V  G  A 
Sbjct: 171 RRSD------GLPATAVAWGTWAG 188

>d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]} Length = 312

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Pinoresinol-lariciresinol reductase
species: Giant arborvitae (Thuja plicata) [TaxId: 3316]

 Score = 43.6 bits (101), Expect = 1e-05
 Identities = 12/93 (12%), Positives = 27/93 (29%)

Query: 3  IVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSS 62
          ++I G T  IG          G    +  R        K  ++          +E  L  
Sbjct: 6  VLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFKQLGAKLIEASLDD 65

Query: 63 LASVRNFASEYNIQHHQLNILINNAGIMGTPFM 95
             + +   + ++    L   + +  I+    +
Sbjct: 66 HQRLVDALKQVDVVISALAGGVLSHHILEQLKL 98

>d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]} Length = 342

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Aldehyde reductase II
species: Sporobolomyces salmonicolor [TaxId: 5005]

 Score = 42.9 bits (99), Expect = 2e-05
 Identities = 11/77 (14%), Positives = 25/77 (32%)

Query: 3  IVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSS 62
          +++TGA   + +     L   G  V    R  +   ++++    + P     A+  D+  
Sbjct: 14 VLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKYPGRFETAVVEDMLK 73

Query: 63 LASVRNFASEYNIQHHQ 79
            +            H 
Sbjct: 74 QGAYDEVIKGAAGVAHI 90

>d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin dehydrogenase {Methylobacterium extorquens [TaxId: 408]} Length = 191

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylene-tetrahydromethanopterin dehydrogenase
species: Methylobacterium extorquens [TaxId: 408]

 Score = 40.6 bits (94), Expect = 5e-05
 Identities = 24/187 (12%), Positives = 51/187 (27%), Gaps = 24/187 (12%)

Query: 3   IVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSS 62
            V+   T  +G  +A +LA  G  VV+  R +   +   +++ K        A   D +S
Sbjct: 26  AVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKRFKVNVTAAETADDAS 85

Query: 63  LASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDT 122
            A                + +     I     +L +   + + +   +  +     L   
Sbjct: 86  RAEA----------VKGAHFVFTAGAIG--LELLPQAAWQNESSIEIVADYNAQPPLGIG 133

Query: 123 MKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLA--NILHA 180
                 K    G+          L          +             +S     +    
Sbjct: 134 GIDATDK----GKEYGGKRAFGALG------IGGLKLKLHRACIAKLFESSEGVFDAEEI 183

Query: 181 NELARRL 187
            +LA+ +
Sbjct: 184 YKLAKEM 190

>d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]} Length = 350

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Negative transcriptional regulator NmrA
species: Aspergillus nidulans [TaxId: 162425]

 Score = 40.8 bits (94), Expect = 9e-05
 Identities = 14/68 (20%), Positives = 21/68 (30%), Gaps = 5/68 (7%)

Query: 3  IVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSS 62
          I + GAT   G    RV A  G HV   V  +           +      V   +  L +
Sbjct: 6  IAVVGATGRQGASLIRVAAAVGHHVRAQVHSLK-----GLIAEELQAIPNVTLFQGPLLN 60

Query: 63 LASVRNFA 70
             + +  
Sbjct: 61 NVPLMDTL 68

>d2pd4a1 c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacter pylori [TaxId: 210]} Length = 274

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Helicobacter pylori [TaxId: 210]

 Score = 40.4 bits (93), Expect = 1e-04
 Identities = 7/42 (16%), Positives = 15/42 (35%), Gaps = 2/42 (4%)

Query: 3  IVITGATS--GIGTETARVLALRGVHVVMGVRDIAAGKDVKE 42
           +I G  +   I    A+    +G  +     + +  K V+ 
Sbjct: 8  GLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNESLEKRVRP 49

>d1d7oa_ c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (Brassica napus) [TaxId: 3708]} Length = 297

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

 Score = 39.7 bits (91), Expect = 2e-04
 Identities = 11/55 (20%), Positives = 19/55 (34%), Gaps = 2/55 (3%)

Query: 3  IVITGA--TSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDA 55
            I G    +G G   A+ LA  G  +++G    A           +   ++V  
Sbjct: 11 AFIAGIADDNGYGWAVAKSLAAAGAEILVGTWVPALNIFETSLRRGKFDQSRVLP 65

>d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 347

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 39.6 bits (91), Expect = 2e-04
 Identities = 30/188 (15%), Positives = 55/188 (29%), Gaps = 17/188 (9%)

Query: 3   IVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSS 62
           +++TG    IG+ T   L   G   V    +++         ++ +    +   E+DL  
Sbjct: 4   VLVTGGAGYIGSHTVVELIENGYDCV-VADNLSNSTYDSVARLEVLTKHHIPFYEVDLCD 62

Query: 63  LASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDT 122
              +     EY I         + AG+               +  N LG  +L  L+   
Sbjct: 63  RKGLEKVFKEYKIDSVI-----HFAGLKAVGESTQIPLR--YYHNNILGTVVLLELMQQY 115

Query: 123 MKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANILHANE 182
                  S       + +   + +   E       N          Y  +K A     N+
Sbjct: 116 NVSKFVFSSSATVYGDATRFPNMIPIPEECPLGPTN---------PYGHTKYAIENILND 166

Query: 183 LARRLKED 190
           L    K+ 
Sbjct: 167 LYNSDKKS 174

>d1oc2a_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} Length = 346

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

 Score = 39.2 bits (90), Expect = 3e-04
 Identities = 33/185 (17%), Positives = 59/185 (31%), Gaps = 12/185 (6%)

Query: 1   MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDL 60
            +I++TG    IG+     +      V + V D       K  + + I   +V+ +  D+
Sbjct: 3   KNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKANL-EAILGDRVELVVGDI 61

Query: 61  SSLASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLL 120
           +    V   A++ +   H             +    S ++      TN +G + L     
Sbjct: 62  ADAELVDKLAAKADAIVHY---------AAESHNDNSLNDPSPFIHTNFIGTYTLLEAAR 112

Query: 121 DTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANILHA 180
               +    S  E        E      H     +K    + YN    YS +K A+ L  
Sbjct: 113 KYDIRFHHVSTDEVYGDLPLREDL--PGHGEGPGEKFTAETNYNPSSPYSSTKAASDLIV 170

Query: 181 NELAR 185
               R
Sbjct: 171 KAWVR 175

>d2h7ma1 c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]} Length = 268

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]

 Score = 39.0 bits (89), Expect = 3e-04
 Identities = 12/49 (24%), Positives = 21/49 (42%), Gaps = 5/49 (10%)

Query: 3  IVITGA--TSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIP 49
          I+++G    S I    ARV   +G  +V+   D      + + I   +P
Sbjct: 9  ILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLR---LIQRITDRLP 54

>d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]} Length = 307

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Phenylcoumaran benzylic ether reductase
species: Loblolly pine (Pinus taeda) [TaxId: 3352]

 Score = 38.2 bits (87), Expect = 5e-04
 Identities = 12/59 (20%), Positives = 26/59 (44%), Gaps = 1/59 (1%)

Query: 3  IVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKD-VKETIVKEIPSAKVDAMELDL 60
          I++ GAT  IG   A+     G    + VR+  A  +  K  +++   ++  + +   +
Sbjct: 6  ILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKASGANIVHGSI 64

>d2blla1 c.2.1.2 (A:316-657) Polymyxin resistance protein ArnA (PrmI) {Escherichia coli [TaxId: 562]} Length = 342

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Polymyxin resistance protein ArnA (PrmI)
species: Escherichia coli [TaxId: 562]

 Score = 38.0 bits (86), Expect = 7e-04
 Identities = 13/95 (13%), Positives = 26/95 (27%), Gaps = 6/95 (6%)

Query: 1  MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDL 60
          M ++I G    IG      L     + V G+   +          + +       +E D+
Sbjct: 1  MRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAIS------RFLNHPHFHFVEGDI 54

Query: 61 SSLASVRNFASEYNIQHHQLNILINNAGIMGTPFM 95
          S  +    +  +       L  +         P  
Sbjct: 55 SIHSEWIEYHVKKCDVVLPLVAIATPIEYTRNPLR 89

>d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]} Length = 205

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Biliverdin IX beta reductase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.9 bits (84), Expect = 0.001
 Identities = 12/31 (38%), Positives = 13/31 (41%)

Query: 3  IVITGATSGIGTETARVLALRGVHVVMGVRD 33
          I I GAT   G  T       G  V + VRD
Sbjct: 6  IAIFGATGQTGLTTLAQAVQAGYEVTVLVRD 36

>d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 312

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-glucuronate decarboxylase 1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.9 bits (85), Expect = 0.001
 Identities = 28/184 (15%), Positives = 54/184 (29%), Gaps = 28/184 (15%)

Query: 3   IVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSS 62
           I+ITG    +G+     L + G  V   V +   G+  K  +   I     + +  D+  
Sbjct: 4   ILITGGAGFVGSHLTDKLMMDGHEVT-VVDNFFTGR--KRNVEHWIGHENFELINHDVVE 60

Query: 63  LASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDT 122
              +            +++ + + A     P      N      TN +G    T  +L  
Sbjct: 61  PLYI------------EVDQIYHLASPASPP--NYMYNPIKTLKTNTIG----TLNMLGL 102

Query: 123 MKKTARKSGGEGRIINVSS-EGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANILHAN 181
            K+         R++  S+ E +          D     +       Y + K        
Sbjct: 103 AKRVGA------RLLLASTSEVYGDPEVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCY 156

Query: 182 ELAR 185
              +
Sbjct: 157 AYMK 160

>d1r6da_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces venezuelae [TaxId: 54571]} Length = 322

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptomyces venezuelae [TaxId: 54571]

 Score = 35.9 bits (82), Expect = 0.003
 Identities = 31/189 (16%), Positives = 53/189 (28%), Gaps = 26/189 (13%)

Query: 1   MDIVITGATSGIGTETARVLALRGVHVVMG----VRDIAAGKDVKETIVKEIPSAKVDAM 56
           M +++TG    IG+   R L       V      V D       +  +       ++  +
Sbjct: 1   MRLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANLAPVDADPRLRFV 60

Query: 57  ELDLSSLASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLT 116
             D+     +       +   H             +    S     +   TN  G     
Sbjct: 61  HGDIRDAGLLARELRGVDAIVHF---------AAESHVDRSIAGASVFTETNVQGTQ--- 108

Query: 117 NLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLAN 176
            LL            G GR+++VS+       +  I      + S       Y+ SK  +
Sbjct: 109 TLL------QCAVDAGVGRVVHVSTN----QVYGSIDSGSWTESSPLEPNSPYAASKAGS 158

Query: 177 ILHANELAR 185
            L A    R
Sbjct: 159 DLVARAYHR 167

>d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]} Length = 357

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Escherichia coli [TaxId: 562]

 Score = 35.6 bits (81), Expect = 0.004
 Identities = 29/190 (15%), Positives = 56/190 (29%), Gaps = 30/190 (15%)

Query: 5   ITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMEL---DLS 61
           ITG T   G+  A  L  +G  V    R  ++    +   + + P        L   DLS
Sbjct: 6   ITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYGDLS 65

Query: 62  SLASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLD 121
             +++     E           +++         +S ++ E     + +G    T  LL+
Sbjct: 66  DTSNLTRILREVQPDEVYNLGAMSHVA-------VSFESPEYTADVDAMG----TLRLLE 114

Query: 122 TMKKTARKSGGEGRIINVSS-----EGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLAN 176
            ++    +     R    S+         +   E   F   +          Y+ +KL  
Sbjct: 115 AIRFLGLEKK--TRFYQASTSELYGLVQEIPQKETTPFYPRS---------PYAVAKLYA 163

Query: 177 ILHANELARR 186
                     
Sbjct: 164 YWITVNYRES 173

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	251
d1fmca_	255	7-alpha-hydroxysteroid dehydrogenase {Escherichia	100.0
d2bd0a1	240	Bacterial sepiapterin reductase {Chlorobium tepidu	100.0
d1iy8a_	258	Levodione reductase {Corynebacterium aquaticum [Ta	100.0
d2c07a1	251	beta-keto acyl carrier protein reductase {Malaria	100.0
d1q7ba_	243	beta-keto acyl carrier protein reductase {Escheric	100.0
d2ae2a_	259	Tropinone reductase {Jimsonweed (Datura stramonium	100.0
d1edoa_	244	beta-keto acyl carrier protein reductase {Oil seed	100.0
d1gega_	255	meso-2,3-butanediol dehydrogenase {Klebsiella pneu	100.0
d1nffa_	244	Putative oxidoreductase Rv2002 {Mycobacterium tube	100.0
d2rhca1	257	beta-keto acyl carrier protein reductase {Streptom	100.0
d1vl8a_	251	Gluconate 5-dehydrogenase {Thermotoga maritima [Ta	100.0
d1x1ta1	260	D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas	100.0
d2ew8a1	247	(s)-1-phenylethanol dehydrogenase {Azoarcus sp. eb	100.0
d1xq1a_	259	Tropinone reductase {Thale cress (Arabidopsis thal	100.0
d1hxha_	253	3beta/17beta hydroxysteroid dehydrogenase {Comamon	100.0
d1zk4a1	251	R-specific alcohol dehydrogenase {Lactobacillus br	100.0
d1zema1	260	Xylitol dehydrogenase {Gluconobacter oxydans [TaxI	100.0
d1hdca_	254	3-alpha,20-beta-hydroxysteroid dehydrogenase {Stre	100.0
d1geea_	261	Glucose dehydrogenase {Bacillus megaterium [TaxId:	100.0
d1k2wa_	256	Sorbitol dehydrogenase {Rhodobacter sphaeroides [T	100.0
d1ulsa_	242	beta-keto acyl carrier protein reductase {Thermus	100.0
d1yb1a_	244	17-beta-hydroxysteroid dehydrogenase type XI {Huma	100.0
d1ydea1	250	Retinal dehydrogenase/reductase 3 {Human (Homo sap	100.0
d2d1ya1	248	Hypothetical protein TTHA0369 {Thermus thermophilu	100.0
d1spxa_	264	Glucose dehydrogenase (5l265) {Nematode (Caenorhab	100.0
d1uzma1	237	beta-keto acyl carrier protein reductase {Mycobact	100.0
d2gdza1	254	15-hydroxyprostaglandin dehydrogenase, PGDH {Human	100.0
d2bgka1	268	Rhizome secoisolariciresinol dehydrogenase {Mayapp	100.0
d1xkqa_	272	Hypothetical protein R05D8.7 {Caenorhabditis elega	100.0
d1ae1a_	258	Tropinone reductase {Jimsonweed (Datura stramonium	100.0
d1xhla_	274	Hypothetical protein F25D1.5 {Caenorhabditis elega	100.0
d1yxma1	297	Peroxisomal trans 2-enoyl CoA reductase {Human (Ho	100.0
d1h5qa_	260	Mannitol dehydrogenase {Mushroom (Agaricus bisporu	100.0
d1xg5a_	257	Putative dehydrogenase ARPG836 (MGC4172) {Human (H	100.0
d1cyda_	242	Carbonyl reductase {Mouse (Mus musculus) [TaxId: 1	100.0
d1pr9a_	244	Carbonyl reductase {Human (Homo sapiens) [TaxId: 9	100.0
d1sbya1	254	Drosophila alcohol dehydrogenase {Fly (Drosophila	100.0
d1oaaa_	259	Sepiapterin reductase {Mouse (Mus musculus) [TaxId	100.0
d1zmta1	252	Halohydrin dehalogenase HheC {Agrobacterium tumefa	100.0
d1bdba_	276	Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Ps	100.0
d2a4ka1	241	beta-keto acyl carrier protein reductase {Thermus	100.0
d1snya_	248	Carbonyl reductase sniffer {Fruit fly (Drosophila	100.0
d1ja9a_	259	1,3,6,8-tetrahydroxynaphthalene reductase {Rice bl	100.0
d1jtva_	285	Human estrogenic 17beta-hydroxysteroid dehydrogena	100.0
d1gz6a_	302	(3R)-hydroxyacyl-CoA dehydrogenase domain of estra	100.0
d1xu9a_	269	11-beta-hydroxysteroid dehydrogenase 1 {Human (Hom	100.0
d1o5ia_	234	beta-keto acyl carrier protein reductase {Thermoto	100.0
d1wmaa1	275	Carbonyl reductase/20beta-hydroxysteroid dehydroge	100.0
d1ulua_	256	Enoyl-ACP reductase {Thermus thermophilus [TaxId:	100.0
d1g0oa_	272	1,3,8-trihydroxynaphtalene reductase (THNR, naphto	100.0
d1yo6a1	250	Putative carbonyl reductase sniffer {Caenorhabditi	100.0
d1w6ua_	294	2,4-dienoyl-CoA reductase, mitochondrial (DECR) {H	100.0
d2ag5a1	245	Dehydrogenase/reductase SDR family member 6, DHRS6	100.0
d2o23a1	248	Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Ho	100.0
d1e7wa_	284	Dihydropteridin reductase (pteridine reductase) {L	100.0
d1dhra_	236	Dihydropteridin reductase (pteridine reductase) {R	100.0
d1ooea_	235	Dihydropteridin reductase (pteridine reductase) {N	100.0
d1qsga_	258	Enoyl-ACP reductase {Escherichia coli [TaxId: 562]	100.0
d1uaya_	241	Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus t	100.0
d1uh5a_	329	Enoyl-ACP reductase {Malaria parasite (Plasmodium	100.0
d1mxha_	266	Dihydropteridin reductase (pteridine reductase) {T	100.0
d2pd4a1	274	Enoyl-ACP reductase {Helicobacter pylori [TaxId: 2	99.97
d1d7oa_	297	Enoyl-ACP reductase {Oil seed rape (Brassica napus	99.97
d2h7ma1	268	Enoyl-ACP reductase {Mycobacterium tuberculosis, T	99.97
d2fr1a1	259	Erythromycin synthase, eryAI, 1st ketoreductase mo	99.97
d1fjha_	257	3-alpha-hydroxysteroid dehydrogenase {Comamonas te	99.95
d1db3a_	357	GDP-mannose 4,6-dehydratase {Escherichia coli [Tax	99.87
d1z45a2	347	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.81
d1udca_	338	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.8
d1t2aa_	347	GDP-mannose 4,6-dehydratase {Human (Homo sapiens)	99.78
d1kewa_	361	dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus	99.77
d1n7ha_	339	GDP-mannose 4,6-dehydratase {Thale-cress (Arabidop	99.77
d1y1pa1	342	Aldehyde reductase II {Sporobolomyces salmonicolor	99.76
d1luaa1	191	Methylene-tetrahydromethanopterin dehydrogenase {M	99.76
d1i24a_	393	Sulfolipid biosynthesis protein SQD1 {Thale cress	99.76
d1rpna_	321	GDP-mannose 4,6-dehydratase {Pseudomonas aeruginos	99.74
d1sb8a_	341	UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomo	99.71
d1ek6a_	346	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.7
d1e6ua_	315	GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (	99.7
d1orra_	338	CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId:	99.69
d1rkxa_	356	CDP-glucose-4,6-dehydratase {Yersinia pseudotuberc	99.69
d2blla1	342	Polymyxin resistance protein ArnA (PrmI) {Escheric	99.69
d1oc2a_	346	dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus	99.69
d1gy8a_	383	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.68
d2b69a1	312	UDP-glucuronate decarboxylase 1 {Human (Homo sapie	99.68
d1r6da_	322	dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces	99.66
d2c5aa1	363	GDP-mannose-3', 5'-epimerase {Thale cress (Arabido	99.65
d1hdoa_	205	Biliverdin IX beta reductase {Human (Homo sapiens)	99.63
d2bkaa1	232	TAT-interacting protein TIP30 {Human (Homo sapiens	99.53
d2q46a1	252	Hypothetical protein At5g02240 (T7H20_290) {Thale	99.48
d1vl0a_	281	DTDP-4-dehydrorhamnose reductase RfbD {Clostridium	99.42
d1n2sa_	298	dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {S	99.41
d2a35a1	212	Hypothetical protein PA4017 {Pseudomonas aeruginos	99.28
d1qyda_	312	Pinoresinol-lariciresinol reductase {Giant arborvi	99.21
d1eq2a_	307	ADP-L-glycero-D-mannoheptose 6-epimerase {Escheric	99.18
d1qyca_	307	Phenylcoumaran benzylic ether reductase {Loblolly	99.07
d1xgka_	350	Negative transcriptional regulator NmrA {Aspergill	99.04
d1jaya_	212	Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archae	99.01
d1e5qa1	182	Saccharopine reductase {Rice blast fungus (Magnapo	98.08
d1vi2a1	182	Putative shikimate dehydrogenase YdiB {Escherichia	98.05
d1v3va2	182	Leukotriene b4 12-hydroxydehydrogenase/prostagland	98.04
d1yb5a2	174	Quinone oxidoreductase {Human (Homo sapiens) [TaxI	98.03
d1lssa_	132	Ktn Mja218 {Archaeon Methanococcus jannaschii [Tax	98.03
d1gu7a2	189	2,4-dienoyl-CoA reductase {Yeast (Candida tropical	97.93
d1hyha1	146	L-2-hydroxyisocapronate dehydrogenase, L-HICDH {La	97.93
d1qora2	179	Quinone oxidoreductase {Escherichia coli [TaxId: 5	97.89
d1gpja2	159	Glutamyl tRNA-reductase middle domain {Archaeon Me	97.85
d1e3ja2	170	Ketose reductase (sorbitol dehydrogenase) {Silverl	97.84
d1pqwa_	183	Putative enoyl reductase domain of polyketide synt	97.82
d1ez4a1	146	Lactate dehydrogenase {Lactobacillus pentosus [Tax	97.76
d1mlda1	144	Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982	97.76
d1o8ca2	77	Hypothetical protein YhdH {Escherichia coli [TaxId	97.75
d1xa0a2	176	B. subtilis YhfP homologue {Bacillus stearothermop	97.75
d1hyea1	145	MJ0490, lactate/malate dehydrogenase {Archaeon Met	97.75
d1a5za1	140	Lactate dehydrogenase {Thermotoga maritima [TaxId:	97.72
d1ldna1	148	Lactate dehydrogenase {Bacillus stearothermophilus	97.72
d1vj0a2	182	Hypothetical protein TM0436 {Thermotoga maritima [	97.68
d2cmda1	145	Malate dehydrogenase {Escherichia coli [TaxId: 562	97.63
d1pzga1	154	Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5	97.62
d1iz0a2	171	Quinone oxidoreductase {Thermus thermophilus [TaxI	97.59
d1pl8a2	171	Ketose reductase (sorbitol dehydrogenase) {Human (	97.58
d1vj1a2	187	Putative zinc-binding alcohol dehydrogenase {Mouse	97.57
d1guza1	142	Malate dehydrogenase {Chlorobium vibrioforme [TaxI	97.57
d2f1ka2	165	Prephenate dehydrogenase TyrA {Synechocystis sp. p	97.55
d7mdha1	175	Malate dehydrogenase {Sorghum (Sorghum vulgare), c	97.49
d1jvba2	170	Alcohol dehydrogenase {Archaeon Sulfolobus solfata	97.49
d1nyta1	170	Shikimate 5-dehydrogenase AroE {Escherichia coli [	97.47
d2ldxa1	159	Lactate dehydrogenase {Mouse (Mus musculus) [TaxId	97.46
d1o6za1	142	Malate dehydrogenase {Archaeon Haloarcula marismor	97.46
d1y7ta1	154	Malate dehydrogenase {Thermus thermophilus [TaxId:	97.44
d1llda1	143	Lactate dehydrogenase {Bifidobacterium longum, str	97.44
d1ojua1	142	Malate dehydrogenase {Archaeon Archaeoglobus fulgi	97.43
d1y6ja1	142	Lactate dehydrogenase {Clostridium thermocellum [T	97.43
d2hmva1	134	Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}	97.42
d1i0za1	160	Lactate dehydrogenase {Human (Homo sapiens), heart	97.4
d1p77a1	171	Shikimate 5-dehydrogenase AroE {Haemophilus influe	97.35
d1uxja1	142	Malate dehydrogenase {Chloroflexus aurantiacus [Ta	97.34
d1t2da1	150	Lactate dehydrogenase {Malaria parasite (Plasmodiu	97.29
d1jqba2	174	Bacterial secondary alcohol dehydrogenase {Clostri	97.26
d1tt7a2	167	Hypothetical protein YhfP {Bacillus subtilis [TaxI	97.25
d1o89a2	177	Hypothetical protein YhdH {Escherichia coli [TaxId	97.24
d1piwa2	168	Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeas	97.16
d2jhfa2	176	Alcohol dehydrogenase {Horse (Equus caballus) [Tax	97.15
d1u7za_	223	Coenzyme A biosynthesis bifunctional protein CoaBC	97.1
d1uufa2	168	Hypothetical protein YahK {Escherichia coli [TaxId	97.09
d1f8fa2	174	Benzyl alcohol dehydrogenase {Acinetobacter calcoa	97.06
d1id1a_	153	Rck domain from putative potassium channel Kch {Es	97.06
d1bg6a2	184	N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {A	97.04
d1llua2	166	Alcohol dehydrogenase {Pseudomonas aeruginosa [Tax	96.99
d2pv7a2	152	Prephenate dehydrogenase TyrA {Haemophilus influen	96.99
d1d1ta2	176	Alcohol dehydrogenase {Human (Homo sapiens), diffe	96.92
d1h2ba2	172	Alcohol dehydrogenase {Archaeon Aeropyrum pernix [	96.88
d1f0ya2	192	Short chain L-3-hydroxyacyl CoA dehydrogenase {Hum	96.75
d1e3ia2	174	Alcohol dehydrogenase {Mouse (Mus musculus), class	96.73
d2pgda2	176	6-phosphogluconate dehydrogenase {Sheep (Ovis orie	96.67
d5mdha1	154	Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982	96.63
d2fzwa2	176	Alcohol dehydrogenase {Human (Homo sapiens), diffe	96.62
d1p0fa2	174	Alcohol dehydrogenase {Frog (Rana perezi) [TaxId:	96.6
d1npya1	167	Shikimate 5-dehydrogenase-like protein HI0607 {Hae	96.58
d1nvta1	177	Shikimate 5-dehydrogenase AroE {Archaeon Methanoco	96.52
d1kola2	195	Formaldehyde dehydrogenase {Pseudomonas putida [Ta	96.49
d1ks9a2	167	Ketopantoate reductase PanE {Escherichia coli [Tax	96.38
d1rjwa2	168	Alcohol dehydrogenase {Bacillus stearothermophilus	96.36
d1jw9b_	247	Molybdenum cofactor biosynthesis protein MoeB {Esc	96.36
d1wdka3	186	Fatty oxidation complex alpha subunit, middle doma	96.29
d1vpda2	161	Hydroxyisobutyrate dehydrogenase {Salmonella typhi	96.22
d1yovb1	426	UBA3 {Human (Homo sapiens) [TaxId: 9606]}	96.21
d1vm6a3	128	Dihydrodipicolinate reductase {Thermotoga maritima	96.08
d1wxxa2	318	Hypothetical protein TTHA1280, middle and C-termin	95.98
d1cdoa2	175	Alcohol dehydrogenase {Cod (Gadus callarias) [TaxI	95.94
d2g5ca2	171	Prephenate dehydrogenase TyrA {Aquifex aeolicus [T	95.82
d1pjca1	168	L-alanine dehydrogenase {Phormidium lapideum [TaxI	95.75
d1yl7a1	135	Dihydrodipicolinate reductase {Mycobacterium tuber	95.75
d2fy8a1	129	Potassium channel-related protein MthK {Archaeon M	95.72
d2b78a2	317	Hypothetical protein SMu776, middle and C-terminal	95.62
d2as0a2	324	Hypothetical protein PH1915, middle and C-terminal	95.43
d1yqga2	152	Pyrroline-5-carboxylate reductase ProC {Neisseria	95.39
d2jfga1	93	UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase	95.3
d1c1da1	201	Phenylalanine dehydrogenase {Rhodococcus sp., M4 [	95.22
d1ve3a1	226	Hypothetical protein PH0226 {Archaeon Pyrococcus h	95.17
d1wzna1	251	Hypothetical methyltransferase PH1305 {Archaeon Py	95.12
d3cuma2	162	Hydroxyisobutyrate dehydrogenase {Pseudomonas aeru	95.03
d1pjza_	201	Thiopurine S-methyltransferase {Pseudomonas syring	94.98
d1txga2	180	Glycerol-3- phosphate dehydrogenase {Archaeoglobus	94.94
d1pjqa1	113	Siroheme synthase CysG, domain 1 {Salmonella typhi	94.59
d1ebda2	117	Dihydrolipoamide dehydrogenase {Bacillus stearothe	94.42
d1y8ca_	246	Putative methyltransferase CAC2371 {Clostridium ac	94.37
d1mv8a2	202	GDP-mannose 6-dehydrogenase {Pseudomonas aeruginos	94.36
d3grsa2	125	Glutathione reductase {Human (Homo sapiens) [TaxId	94.3
d1n1ea2	189	Glycerol-3- phosphate dehydrogenase {Trypanosome (	94.24
d1p9oa_	290	Phosphopantothenoylcysteine synthetase {Human (Hom	94.18
d1pgja2	178	6-phosphogluconate dehydrogenase {Trypanosoma bruc	94.04
d2ahra2	152	Pyrroline-5-carboxylate reductase ProC {Streptococ	94.02
d2fyta1	311	Protein arginine N-methyltransferase 3, PRMT3 {Hum	93.91
d1kjqa2	111	Glycinamide ribonucleotide transformylase PurT, N-	93.87
d1xhca2	122	NADH oxidase /nitrite reductase {Pyrococcus furios	93.74
d1nv8a_	271	N5-glutamine methyltransferase, HemK {Thermotoga m	93.67
d1onfa2	117	Glutathione reductase {Plasmodium falciparum [TaxI	93.48
d1u8xx1	167	Maltose-6'-phosphate glucosidase GlvA {Bacillus su	93.3
d1kyqa1	150	Bifunctional dehydrogenase/ferrochelatase Met8p, N	93.29
d1yova1	529	Amyloid beta precursor protein-binding protein 1,	93.25
d1byia_	224	Dethiobiotin synthetase {Escherichia coli [TaxId:	93.2
d1s6ya1	169	6-phospho-beta-glucosidase {Bacillus stearothermop	93.12
d1oria_	316	Protein arginine N-methyltransferase 1, PRMT1 {Rat	93.07
d1jg1a_	215	Protein-L-isoaspartyl O-methyltransferase {Archaeo	93.0
d2bzga1	229	Thiopurine S-methyltransferase {Human (Homo sapien	92.97
d1up7a1	162	6-phospho-beta-glucosidase {Thermotoga maritima [T	92.93
d1j4aa1	197	D-lactate dehydrogenase {Lactobacillus helveticus	92.87
d1i36a2	152	Conserved hypothetical protein MTH1747 {Archaeon M	92.87
d1l7da1	183	Nicotinamide nucleotide transhydrogenase dI compon	92.8
d1h6va2	122	Mammalian thioredoxin reductase {Rat (Rattus norve	92.8
d1dl5a1	213	Protein-L-isoaspartyl O-methyltransferase {Thermot	92.77
d2nxca1	254	PrmA-like protein TTHA0656 (TT0836) {Thermus therm	92.73
d1d7ya2	121	NADH-dependent ferredoxin reductase, BphA4 {Pseudo	92.69
d1l3ia_	186	Precorrin-6Y methyltransferase (CbiT) {Archaeon Me	92.64
d1wy7a1	201	Hypothetical protein PH1948 {Archaeon Pyrococcus h	92.6
d1obba1	171	Alpha-glucosidase AglA {Thermotoga maritima [TaxId	92.59
d1m6ya2	192	TM0872, methyltransferase domain {Thermotoga marit	92.5
d1nhpa2	123	NADH peroxidase {Enterococcus faecalis [TaxId: 135	92.49
d2fhpa1	182	Putative methylase EF2452 {Enterococcus faecalis [	92.35
d2i6ga1	198	Putative methyltransferase TehB {Salmonella typhim	92.29
d1v59a2	122	Dihydrolipoamide dehydrogenase {Baker's yeast (Sac	92.07
d1b0aa1	166	Methylenetetrahydrofolate dehydrogenase/cyclohydro	92.03
d2igta1	309	Putative methyltransferase Atu0340 {Agrobacterium	91.94
d2csua3	163	Acetate-CoA ligase alpha chain, AcdA, domains 2 an	91.92
d1djqa2	156	Trimethylamine dehydrogenase, C-terminal domain {M	91.91
d2naca1	188	Formate dehydrogenase {Pseudomonas sp., strain 101	91.89
d3lada2	119	Dihydrolipoamide dehydrogenase {Azotobacter vinela	91.87
d1gesa2	116	Glutathione reductase {Escherichia coli [TaxId: 56	91.76
d1ne2a_	197	Hypothetical protein Ta1320 {Archaeon Thermoplasma	91.61
d1q0qa2	151	1-deoxy-D-xylulose-5-phosphate reductoisomerase {E	91.51
d1c0pa1	268	D-aminoacid oxidase, N-terminal domain {Rhodotorul	91.34
d1gsoa2	105	Glycinamide ribonucleotide synthetase (GAR-syn), N	91.34
d1vkna1	176	N-acetyl-gamma-glutamyl-phosphate reductase ArgC {	91.12
d1ygya1	184	Phosphoglycerate dehydrogenase {Mycobacterium tube	91.11
d1a4ia1	170	Methylenetetrahydrofolate dehydrogenase/cyclohydro	91.08
d1ojta2	125	Dihydrolipoamide dehydrogenase {Neisseria meningit	91.0
d2cvza2	156	Hydroxyisobutyrate dehydrogenase {Thermus thermoph	91.0
d1i1na_	224	Protein-L-isoaspartyl O-methyltransferase {Human (	90.98
d1dxla2	123	Dihydrolipoamide dehydrogenase {Garden pea (Pisum	90.98
d1dlja2	196	UDP-glucose dehydrogenase (UDPGDH) {Streptococcus	90.92
d2d59a1	139	Hypothetical protein PH1109 {Pyrococcus horikoshii	90.9
d1g6q1_	328	Arginine methyltransferase, HMT1 {Baker's yeast (S	90.79
d1leha1	230	Leucine dehydrogenase {Bacillus sphaericus [TaxId:	90.39
d1seza1	373	Protoporphyrinogen oxidase {Tobacco (Nicotiana tab	90.25
d2esra1	152	Putative methyltransferase SPy1538 {Streptococcus	90.24
d2i76a2	153	Hypothetical protein TM1727 {Thermotoga maritima [	90.03
d1li4a1	163	S-adenosylhomocystein hydrolase {Human (Homo sapie	89.98
d2ivda1	347	Protoporphyrinogen oxidase {Myxococcus xanthus [Ta	89.97
d1gtea4	196	Dihydropyrimidine dehydrogenase, domain 2 {Pig (Su	89.89
d1aoga2	117	Trypanothione reductase {Trypanosoma cruzi [TaxId:	89.82
d2iida1	370	L-aminoacid oxidase {Malayan pit viper (Calloselas	89.69
d1ps9a3	179	2,4-dienoyl-CoA reductase, middle domain {Escheric	89.53
d1u0sy_	118	CheY protein {Thermotoga maritima [TaxId: 2336]}	89.5
d2bcgg1	297	Guanine nucleotide dissociation inhibitor, GDI {Ba	89.43
d1dusa_	194	Hypothetical protein MJ0882 {Archaeon Methanococcu	89.27
d3bula2	156	Methionine synthase, C-terminal domain {Escherichi	89.12
d1vbfa_	224	Protein-L-isoaspartyl O-methyltransferase {Sulfolo	88.86
d1ihua2	279	Arsenite-translocating ATPase ArsA {Escherichia co	88.73
d1hyqa_	232	Cell division regulator MinD {Archaeon Archaeoglob	88.42
d1qp8a1	181	Putative formate dehydrogenase {Archaeon Pyrobacul	88.35
d2hjsa1	144	Usg-1 protein homolog PA3116 {Pseudomonas aerugino	88.34
d1q1ra2	133	Putidaredoxin reductase {Pseudomonas putida [TaxId	88.19
d1r0ka2	150	1-deoxy-D-xylulose-5-phosphate reductoisomerase {Z	87.67
d2voua1	265	Dihydroxypyridine hydroxylase DhpH {Arthrobacter n	87.66
d1sc6a1	188	Phosphoglycerate dehydrogenase {Escherichia coli [	87.53
d1yb2a1	250	Hypothetical protein Ta0852 {Thermoplasma acidophi	87.42
d1f0ka_	351	Peptidoglycan biosynthesis glycosyltransferase Mur	87.28
d1susa1	227	Caffeoyl-CoA O-methyltransferase {Alfalfa (Medicag	87.1
d1a9xa3	127	Carbamoyl phosphate synthetase (CPS), large subuni	86.89
d2cl5a1	214	Catechol O-methyltransferase, COMT {Rat (Rattus no	86.84
d1djqa3	233	Trimethylamine dehydrogenase, middle domain {Methy	86.7
d1ws6a1	171	Methyltransferase TTHA0928 {Thermus thermophilus [	86.67
d1vl5a_	231	Hypothetical protein BH2331 {Bacillus halodurans [	86.63
d1diha1	162	Dihydrodipicolinate reductase {Escherichia coli [T	86.33
d1r18a_	223	Protein-L-isoaspartyl O-methyltransferase {Fruit f	86.24
d1iuka_	136	Hypothetical protein TT1466 {Thermus thermophilus	86.2
d1mx3a1	193	Transcription corepressor CtbP {Human (Homo sapien	86.07
d1g3qa_	237	Cell division regulator MinD {Archaeon Pyrococcus	85.91
d1k0ia1	292	p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas a	85.83
d1lvla2	115	Dihydrolipoamide dehydrogenase {Pseudomonas putida	85.63
d1a9xa4	121	Carbamoyl phosphate synthetase (CPS), large subuni	85.54
d1edza1	171	Methylenetetrahydrofolate dehydrogenase/cyclohydro	85.24
d1pj5a2	305	N,N-dimethylglycine oxidase {Arthrobacter globifor	84.99
d2o57a1	282	Putative sarcosine dimethylglycine methyltransfera	84.93
d2bi7a1	314	UDP-galactopyranose mutase, N-terminal domain {Kle	84.75
d2avda1	219	COMT domain-containing protein 1, COMTD1 {Human (H	84.63
d2b3ta1	274	N5-glutamine methyltransferase, HemK {Escherichia	84.55
d1y81a1	116	Hypothetical protein PF0725 {Pyrococcus furiosus [	84.47
d1cp2a_	269	Nitrogenase iron protein {Clostridium pasteurianum	83.95
d2gz1a1	154	Aspartate beta-semialdehyde dehydrogenase {Strepto	83.79
d1pn3a_	391	TDP-epi-vancosaminyltransferase GtfA {Amycolatopsi	83.77
d1dxya1	199	D-2-hydroxyisocaproate dehydrogenase {Lactobacillu	83.5
d1gdha1	191	D-glycerate dehydrogenase {Hyphomicrobium methylov	83.08
d1gesa1	217	Glutathione reductase {Escherichia coli [TaxId: 56	82.93
d2f5va1	379	Pyranose 2-oxidase {White-rot fungus (Peniophora s	82.87
d1t4ba1	146	Aspartate beta-semialdehyde dehydrogenase {Escheri	82.78
d1mo9a2	121	NADH-dependent 2-ketopropyl coenzyme M oxidoreduct	82.69
d2blna2	203	Polymyxin resistance protein ArnA, N-terminal doma	82.57
d2i0za1	251	Flavoprotein BC4706 {Bacillus cereus [TaxId: 1396]	82.5
d1ri5a_	252	mRNA cap (Guanine N-7) methyltransferase {Fungus (	82.2
d1xxla_	234	Hypothetical protein YcgJ {Bacillus subtilis [TaxI	82.12
d1v59a1	233	Dihydrolipoamide dehydrogenase {Baker's yeast (Sac	81.95
d1nkva_	245	Hypothetical Protein YjhP {Escherichia coli [TaxId	81.92
d1vbka1	132	Hypothetical protein PH1313, C-terminal domain {Ar	81.87
d1im8a_	225	Hypothetical protein HI0319 (YecO) {Haemophilus in	81.82
d1dxla1	221	Dihydrolipoamide dehydrogenase {Garden pea (Pisum	81.77
d1mb4a1	147	Aspartate beta-semialdehyde dehydrogenase {Vibrio	81.76
d2fpoa1	183	Methylase YhhF {Escherichia coli [TaxId: 562]}	81.67
d1fcda1	186	Flavocytochrome c sulfide dehydrogenase, FCSD, fla	81.29
d2fr1a2	209	Erythromycin synthase, eryAI, 1st ketoreductase mo	81.28
d2frna1	260	Hypothetical protein PH0793 {Pyrococcus horikoshii	80.77
d2b4aa1	118	Hypothetical protein BH3024 {Bacillus halodurans [	80.75
d1onfa1	259	Glutathione reductase {Plasmodium falciparum [TaxI	80.36
d2eyqa5	211	Transcription-repair coupling factor, TRCF {Escher	80.23
d1qkia1	203	Glucose 6-phosphate dehydrogenase, N-terminal doma	80.1
d2ex4a1	222	Adrenal gland protein AD-003 (C9orf32) {Human (Hom	80.09

>d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 7-alpha-hydroxysteroid dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=9.1e-45  Score=300.42  Aligned_cols=215  Identities=27%  Similarity=0.325  Sum_probs=188.5

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      |++|||||++|||+++|++|+++|++|++++|++++++++.+++.+.  +.++.++++|++++++++++++++.+++|++
T Consensus        12 K~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~l~~~--g~~~~~~~~Dvs~~~~~~~~~~~~~~~~g~i   89 (255)
T d1fmca_          12 KCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQL--GGQAFACRCDITSEQELSALADFAISKLGKV   89 (255)
T ss_dssp             CEEEETTTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHT--TCCEEEEECCTTCHHHHHHHHHHHHHHHSSC
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHc--CCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            78999999999999999999999999999999999999999999775  5679999999999999999999999999999


Q ss_pred             eEEEEcCCCCCC-CCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccccCCC
Q 025509           81 NILINNAGIMGT-PFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKIND  159 (251)
Q Consensus        81 d~lv~~ag~~~~-~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~  159 (251)
                      |+||||||+..+ +.+++.++|++++++|+.+++.++|+++|+|.++     +.|+||++||.++..             
T Consensus        90 DilvnnAG~~~~~~~e~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~-----~~g~Ii~isS~~~~~-------------  151 (255)
T d1fmca_          90 DILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKN-----GGGVILTITSMAAEN-------------  151 (255)
T ss_dssp             CEEEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----TCEEEEEECCGGGTC-------------
T ss_pred             CEeeeCCcCCCCCcccCCHHHHHHHHHHHHHHhhhhHHHHHhhhccc-----cccccccccccchhc-------------
Confidence            999999997654 5588999999999999999999999999999987     578999999988776             


Q ss_pred             CCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCCcchhhhhhhhhhhhhHhhhccccChHH
Q 025509          160 PSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRHNSLFRSMNTILHALPGIAGKCLLKNVQQ  239 (251)
Q Consensus       160 ~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (251)
                        +.+++++|++||+|+.+|+++||.|++++|  |+||+|+||+|+|++.+..........+....|.    ...-.|++
T Consensus       152 --~~~~~~~Y~asKaal~~lt~~lA~el~~~g--IrVN~I~PG~i~T~~~~~~~~~e~~~~~~~~~pl----~R~g~ped  223 (255)
T d1fmca_         152 --KNINMTSYASSKAAASHLVRNMAFDLGEKN--IRVNGIAPGAILTDALKSVITPEIEQKMLQHTPI----RRLGQPQD  223 (255)
T ss_dssp             --CCTTCHHHHHHHHHHHHHHHHHHHHHHTTT--EEEEEEEECSBCSHHHHTTCCHHHHHHHHHTCSS----CSCBCHHH
T ss_pred             --cccccccchhHHHHHHHHHHHHHHHhCccC--eEEEEeeeCcCcChHhhccCCHHHHHHHHhcCCC----CCCcCHHH
Confidence              778889999999999999999999999999  9999999999999998765443433333333332    34456777


Q ss_pred             HHHH
Q 025509          240 VILN  243 (251)
Q Consensus       240 ~~~~  243 (251)
                      .+..
T Consensus       224 vA~~  227 (255)
T d1fmca_         224 IANA  227 (255)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            7764

>d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Bacterial sepiapterin reductase
species: Chlorobium tepidum [TaxId: 1097]

Probab=100.00  E-value=1.5e-44  Score=296.59  Aligned_cols=189  Identities=24%  Similarity=0.335  Sum_probs=175.4

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCE-------EEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHH
Q 025509            1 MDIVITGATSGIGTETARVLALRGVH-------VVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEY   73 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~-------Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~   73 (251)
                      ++||||||++|||+++|++|+++|++       |++.+|++++++++.+++.+.  +.++.++++|++|+++++++++++
T Consensus         2 ~VvlITGas~GIG~aia~~la~~G~~~~~~~~~v~~~~r~~~~l~~~~~~~~~~--g~~~~~~~~Dvt~~~~v~~~~~~~   79 (240)
T d2bd0a1           2 HILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAE--GALTDTITADISDMADVRRLTTHI   79 (240)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHTT--TCEEEEEECCTTSHHHHHHHHHHH
T ss_pred             CEEEEccCCCHHHHHHHHHHHHhCccccccCcEEEEEeCCHHHHHHHHHHHHhc--CCcEEEEEecCCCHHHHHHHHHHH
Confidence            35899999999999999999999997       899999999999999988765  568999999999999999999999


Q ss_pred             HhcCCCeeEEEEcCCCCC--CCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCC
Q 025509           74 NIQHHQLNILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEG  151 (251)
Q Consensus        74 ~~~~g~id~lv~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~  151 (251)
                      .+++|++|+||||||+..  ++.+.+.++|++++++|+.|++.++|+++|+|+++     +.|+||++||.++..     
T Consensus        80 ~~~~g~iDilvnnAg~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~-----~~G~Ii~isS~~~~~-----  149 (240)
T d2bd0a1          80 VERYGHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQ-----HSGHIFFITSVAATK-----  149 (240)
T ss_dssp             HHHTSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----TCEEEEEECCGGGTS-----
T ss_pred             HHHcCCcceeecccccccCCccccCCHHHHhhcCCEeehHHHHHHHHHhHHHHhc-----CCCceEEEechhhcC-----
Confidence            999999999999999763  46788999999999999999999999999999987     579999999998877     


Q ss_pred             cccccCCCCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCCc
Q 025509          152 IRFDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRHNS  213 (251)
Q Consensus       152 ~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~~~  213 (251)
                                +.+++++|++||+|+.+|+++|+.|++++|  |+||+|+||+++|+|+....
T Consensus       150 ----------~~~~~~~Y~asK~al~~lt~~la~el~~~g--Irvn~i~PG~v~T~~~~~~~  199 (240)
T d2bd0a1         150 ----------AFRHSSIYCMSKFGQRGLVETMRLYARKCN--VRITDVQPGAVYTPMWGKVD  199 (240)
T ss_dssp             ----------CCTTCHHHHHHHHHHHHHHHHHHHHHTTTT--EEEEEEEECCBCSTTTCCCC
T ss_pred             ----------CCCCChHHHHHHHHHHHHHHHHHHHhCcCC--eEEEEeeeCcccCchhhhcC
Confidence                      788899999999999999999999999999  99999999999999987643

>d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Levodione reductase
species: Corynebacterium aquaticum [TaxId: 144185]

Probab=100.00  E-value=7.5e-45  Score=301.41  Aligned_cols=189  Identities=25%  Similarity=0.341  Sum_probs=177.4

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      |++|||||++|||+++|++|+++|++|++++|+.+++++..+++.+..++.++.++++|++|+++++++++++.+++|++
T Consensus         5 K~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~~~G~i   84 (258)
T d1iy8a_           5 RVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTATTERFGRI   84 (258)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTSHHHHHHHHHHHHHHHSCC
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhCCCCeEEEEeccCCCHHHHHHHHHHHHHHhCCC
Confidence            78999999999999999999999999999999999999999999888777889999999999999999999999999999


Q ss_pred             eEEEEcCCCCC---CCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccccC
Q 025509           81 NILINNAGIMG---TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKI  157 (251)
Q Consensus        81 d~lv~~ag~~~---~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~  157 (251)
                      |+||||||+..   ++.+++.++|++++++|+.+++.++|+++|+|+++     ..|+||++||.++..           
T Consensus        85 DiLVnnAG~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~-----~~G~Ii~isS~~~~~-----------  148 (258)
T d1iy8a_          85 DGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQ-----GSGMVVNTASVGGIR-----------  148 (258)
T ss_dssp             SEEEECCCCCCCCBCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----TCCEEEEECCGGGTS-----------
T ss_pred             CEEEECCcccccCCchhhhhhhHHHHHhhhhccchhhhhhhhHhhhhhh-----cCCCCcccccHhhcc-----------
Confidence            99999999753   35678999999999999999999999999999987     579999999998876           


Q ss_pred             CCCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccC
Q 025509          158 NDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  211 (251)
Q Consensus       158 ~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  211 (251)
                          +.+...+|+++|+|+.+|+++||.|++++|  |+||+|+||+++|||.+.
T Consensus       149 ----~~~~~~~Y~asKaal~~lt~~lA~el~~~g--IrVN~i~PG~v~T~~~~~  196 (258)
T d1iy8a_         149 ----GIGNQSGYAAAKHGVVGLTRNSAVEYGRYG--IRINAIAPGAIWTPMVEN  196 (258)
T ss_dssp             ----BCSSBHHHHHHHHHHHHHHHHHHHHHGGGT--CEEEEEEECSBCSHHHHH
T ss_pred             ----CCCCchHHHHHHHHHHHHHHHHHHHhCccC--ceEEEEeeCcccCHHHHH
Confidence                788899999999999999999999999999  999999999999999764

>d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=100.00  E-value=1.9e-44  Score=297.90  Aligned_cols=214  Identities=28%  Similarity=0.322  Sum_probs=183.5

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      |++|||||++|||+++|++|+++|++|++++|++++++++.+++.+.  +.++.++++|++++++++++++++.+++|++
T Consensus        11 KvalITGas~GIG~a~a~~la~~Ga~V~~~~r~~~~l~~~~~~l~~~--g~~~~~~~~Dvt~~~~v~~~~~~~~~~~g~i   88 (251)
T d2c07a1          11 KVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSF--GYESSGYAGDVSKKEEISEVINKILTEHKNV   88 (251)
T ss_dssp             CEEEEESTTSHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHTT--TCCEEEEECCTTCHHHHHHHHHHHHHHCSCC
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhc--CCcEEEEEccCCCHHHHHHHHHHHHHhcCCc
Confidence            78999999999999999999999999999999999999999998765  5679999999999999999999999999999


Q ss_pred             eEEEEcCCCCC--CCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccccCC
Q 025509           81 NILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKIN  158 (251)
Q Consensus        81 d~lv~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~  158 (251)
                      |+||||||...  +..+.+.++|++++++|+.+++.++++++|+|+++     +.|+||++||.++..            
T Consensus        89 Dilvnnag~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~-----~~G~IVnisS~~~~~------------  151 (251)
T d2c07a1          89 DILVNNAGITRDNLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMINN-----RYGRIINISSIVGLT------------  151 (251)
T ss_dssp             CEEEECCCCCCCCCTTTCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHH-----TCEEEEEECCTHHHH------------
T ss_pred             eeeeeccccccccccccccHHHHhhhheeeehhhhhhhhhcCcccccC-----CCeEEEEECCHHhcC------------
Confidence            99999999764  36678899999999999999999999999999987     579999999999887            


Q ss_pred             CCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCCcchhhhhhhhhhhhhHhhhccccChH
Q 025509          159 DPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRHNSLFRSMNTILHALPGIAGKCLLKNVQ  238 (251)
Q Consensus       159 ~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (251)
                         +.++..+|++||+|+.+|+++||.|++++|  |+||+|+||+++|+|...... ...+.+....|    -..+-.++
T Consensus       152 ---~~~~~~~Y~asKaal~~ltr~lA~el~~~g--IrVN~V~PG~v~T~~~~~~~~-~~~~~~~~~~p----l~R~~~pe  221 (251)
T d2c07a1         152 ---GNVGQANYSSSKAGVIGFTKSLAKELASRN--ITVNAIAPGFISSDMTDKISE-QIKKNIISNIP----AGRMGTPE  221 (251)
T ss_dssp             ---CCTTCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECSBCC-----CCH-HHHHHHHTTCT----TSSCBCHH
T ss_pred             ---CCCCCHHHHHHHHHHHHHHHHHHHHhhhhC--eEEEEEccCCEecccccccCH-HHHHHHHhcCC----CCCCcCHH
Confidence               778889999999999999999999999999  999999999999999876532 23233333333    23455677


Q ss_pred             HHHHH
Q 025509          239 QVILN  243 (251)
Q Consensus       239 ~~~~~  243 (251)
                      +.+..
T Consensus       222 dvA~~  226 (251)
T d2c07a1         222 EVANL  226 (251)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            77654

>d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=1.8e-44  Score=296.64  Aligned_cols=211  Identities=27%  Similarity=0.379  Sum_probs=184.0

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      |++|||||++|||+++|+.|+++|++|++++|+++.++++.+++     +.++.++++|++++++++++++++.+++|++
T Consensus         5 K~alITGas~GIG~a~a~~l~~~G~~Vv~~~r~~~~l~~~~~~~-----~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i   79 (243)
T d1q7ba_           5 KIALVTGASRGIGRAIAETLAARGAKVIGTATSENGAQAISDYL-----GANGKGLMLNVTDPASIESVLEKIRAEFGEV   79 (243)
T ss_dssp             CEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHH-----GGGEEEEECCTTCHHHHHHHHHHHHHHTCSC
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh-----CCCCcEEEEEecCHHHhhhhhhhhhcccCCc
Confidence            78999999999999999999999999999999999988888777     4568899999999999999999999999999


Q ss_pred             eEEEEcCCCCC--CCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccccCC
Q 025509           81 NILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKIN  158 (251)
Q Consensus        81 d~lv~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~  158 (251)
                      |+||||||...  ++.+.+.++|++.+++|+.+++.++|+++|+|+++     +.|+||++||.++..            
T Consensus        80 DilVnnAg~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~-----~~G~II~isS~~~~~------------  142 (243)
T d1q7ba_          80 DILVNNAGITRDNLLMRMKDEEWNDIIETNLSSVFRLSKAVMRAMMKK-----RHGRIITIGSVVGTM------------  142 (243)
T ss_dssp             SEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----TCEEEEEECCHHHHH------------
T ss_pred             ceehhhhhhccccccccccccccccccceeechhhhhHHHHHHHHHHc-----CCCEeeeecchhhcC------------
Confidence            99999999764  46788999999999999999999999999999987     579999999999887            


Q ss_pred             CCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCCcchhhhhhhhhhhhhHhhhccccChH
Q 025509          159 DPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRHNSLFRSMNTILHALPGIAGKCLLKNVQ  238 (251)
Q Consensus       159 ~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (251)
                         +.++.++|++||+|+.+|+++||.|++++|  |+||+|+||+++|+|.+.... .....+....|.    ..+-+|+
T Consensus       143 ---~~~~~~~Y~asKaal~~lt~~lA~ela~~g--IrVN~I~PG~i~T~~~~~~~~-~~~~~~~~~~pl----~R~~~pe  212 (243)
T d1q7ba_         143 ---GNGGQANYAAAKAGLIGFSKSLAREVASRG--ITVNVVAPGFIETDMTRALSD-DQRAGILAQVPA----GRLGGAQ  212 (243)
T ss_dssp             ---CCTTCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECSBCCHHHHTSCH-HHHHHHHTTCTT----SSCBCHH
T ss_pred             ---CCCCCHHHHHHHHHHHHHHHHHHHHhCccC--eEEEEEecceEechhhhhhhh-hHHHHHHhcCCC----CCCCCHH
Confidence               778889999999999999999999999999  999999999999999876533 222233333321    3344677


Q ss_pred             HHHHH
Q 025509          239 QVILN  243 (251)
Q Consensus       239 ~~~~~  243 (251)
                      +.+..
T Consensus       213 dvA~~  217 (243)
T d1q7ba_         213 EIANA  217 (243)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            76654

>d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), II [TaxId: 4076]

Probab=100.00  E-value=4.7e-44  Score=296.81  Aligned_cols=219  Identities=24%  Similarity=0.236  Sum_probs=185.3

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCC-C
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHH-Q   79 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g-~   79 (251)
                      |++|||||++|||+++|++|+++|++|++++|++++++++.+++.+.  +..+.++++|++++++++++++++.++++ +
T Consensus         9 K~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~--g~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~~   86 (259)
T d2ae2a_           9 CTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSK--GFKVEASVCDLSSRSERQELMNTVANHFHGK   86 (259)
T ss_dssp             CEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT--TCEEEEEECCTTCHHHHHHHHHHHHHHTTTC
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc--CCCceEEEeeCCCHHHHHHHHHHHHHHhCCC
Confidence            78999999999999999999999999999999999999999988765  56889999999999999999999988876 7


Q ss_pred             eeEEEEcCCCCC--CCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccccC
Q 025509           80 LNILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKI  157 (251)
Q Consensus        80 id~lv~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~  157 (251)
                      +|+||||||+..  ++.+.+.++|++++++|+.+++.++++++|+|+++     ..|+||++||..+..           
T Consensus        87 idilvnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~-----~~G~Ii~isS~~~~~-----------  150 (259)
T d2ae2a_          87 LNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKAS-----ERGNVVFISSVSGAL-----------  150 (259)
T ss_dssp             CCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT-----SSEEEEEECCGGGTS-----------
T ss_pred             ceEEEECCceeccCccccCCHHHHHHHHhcccceeEEEEeeccchhhhh-----ccccccccccccccc-----------
Confidence            999999999754  46788999999999999999999999999999986     579999999988876           


Q ss_pred             CCCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCCcchhhhhhhhhhhhhHhhhccccCh
Q 025509          158 NDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRHNSLFRSMNTILHALPGIAGKCLLKNV  237 (251)
Q Consensus       158 ~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (251)
                          +.++..+|+++|+|+.+|+++||.|++++|  |+||+|+||+|+|++.+....................-..+-.|
T Consensus       151 ----~~~~~~~Y~asKaal~~lt~~lA~el~~~g--IrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~pl~R~g~p  224 (259)
T d2ae2a_         151 ----AVPYEAVYGATKGAMDQLTRCLAFEWAKDN--IRVNGVGPGVIATSLVEMTIQDPEQKENLNKLIDRCALRRMGEP  224 (259)
T ss_dssp             ----CCTTCHHHHHHHHHHHHHHHHHHHHTGGGT--EEEEEEEECSBCSHHHHHHTTSHHHHHHHHHHHHTSTTCSCBCH
T ss_pred             ----ccccccchHHHHHHHHHHHHHHHHHhCcCc--eEEEEeeeCcccCHHHHhhhhchhhHHHHHHHHhcCCCCCCcCH
Confidence                778889999999999999999999999999  99999999999999976432222111111111111222345567


Q ss_pred             HHHHHH
Q 025509          238 QQVILN  243 (251)
Q Consensus       238 ~~~~~~  243 (251)
                      ++.+..
T Consensus       225 edvA~~  230 (259)
T d2ae2a_         225 KELAAM  230 (259)
T ss_dssp             HHHHHH
T ss_pred             HHHHHH
Confidence            777664

>d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=100.00  E-value=5.7e-44  Score=293.77  Aligned_cols=214  Identities=26%  Similarity=0.289  Sum_probs=184.4

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEe-cCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCC
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGV-RDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQ   79 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~-r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~   79 (251)
                      ++||||||++|||+++|++|+++|++|++.+ |+++.++++.+++.+.  +.++.++++|++++++++++++++.+++|+
T Consensus         2 pV~lITGas~GIG~a~a~~la~~Ga~V~i~~~~~~~~~~~~~~~~~~~--g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   79 (244)
T d1edoa_           2 PVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAY--GGQAITFGGDVSKEADVEAMMKTAIDAWGT   79 (244)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHH--TCEEEEEECCTTSHHHHHHHHHHHHHHSSC
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHc--CCcEEEEeCCCCCHHHHHHHHHHHHHHcCC
Confidence            5799999999999999999999999999875 5677788888887665  568999999999999999999999999999


Q ss_pred             eeEEEEcCCCCC--CCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccccC
Q 025509           80 LNILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKI  157 (251)
Q Consensus        80 id~lv~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~  157 (251)
                      +|+||||||...  ++.+.+.++|++.+++|+.+++.++|+++|+|+++     +.|+||++||.++..           
T Consensus        80 iDiLVnnAg~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~-----~~G~IVnisS~~~~~-----------  143 (244)
T d1edoa_          80 IDVVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKK-----RKGRIINIASVVGLI-----------  143 (244)
T ss_dssp             CSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----TCEEEEEECCTHHHH-----------
T ss_pred             CCccccccccccccchhccchHHHHHHHhhhhhhHHHHHHHHHHHHHHc-----CCcEEEEEcChhhcC-----------
Confidence            999999999764  46788999999999999999999999999999987     579999999999887           


Q ss_pred             CCCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCCcchhhhhhhhhhhhhHhhhccccCh
Q 025509          158 NDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRHNSLFRSMNTILHALPGIAGKCLLKNV  237 (251)
Q Consensus       158 ~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (251)
                          +.++..+|++||+|+.+|+++||.|++++|  |+||+|+||+++|+|.+.... ...+.+....|    -..+-++
T Consensus       144 ----~~~~~~~Y~asKaal~~ltk~lA~el~~~g--IrvN~I~PG~i~T~~~~~~~~-~~~~~~~~~~p----l~R~~~p  212 (244)
T d1edoa_         144 ----GNIGQANYAAAKAGVIGFSKTAAREGASRN--INVNVVCPGFIASDMTAKLGE-DMEKKILGTIP----LGRTGQP  212 (244)
T ss_dssp             ----CCTTCHHHHHHHHHHHHHHHHHHHHHHTTT--EEEEEEEECSBCSHHHHTTCH-HHHHHHHTSCT----TCSCBCH
T ss_pred             ----CCCCCHHHHHHHHHHHHChHHHHHHHhhhC--cEEEEEecceeccHHHHHhhH-HHHHHHHhcCC----CCCCcCH
Confidence                778889999999999999999999999999  999999999999999876532 22222222222    2345567


Q ss_pred             HHHHHH
Q 025509          238 QQVILN  243 (251)
Q Consensus       238 ~~~~~~  243 (251)
                      ++.+..
T Consensus       213 ~dvA~~  218 (244)
T d1edoa_         213 ENVAGL  218 (244)
T ss_dssp             HHHHHH
T ss_pred             HHHHHH
Confidence            777764

>d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: meso-2,3-butanediol dehydrogenase
species: Klebsiella pneumoniae [TaxId: 573]

Probab=100.00  E-value=4.9e-44  Score=296.17  Aligned_cols=188  Identities=25%  Similarity=0.306  Sum_probs=174.3

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      |++|||||++|||+++|++|+++|++|++++|++++++++.+++.+.  +.++.++++|++++++++++++++.+++|++
T Consensus         2 KValITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~i~~~--g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i   79 (255)
T d1gega_           2 KVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQA--GGHAVAVKVDVSDRDQVFAAVEQARKTLGGF   79 (255)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT--TCCEEEEECCTTSHHHHHHHHHHHHHHTTCC
T ss_pred             CEEEEcCCccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc--CCcEEEEEeeCCCHHHHHHHHHHHHHHhCCc
Confidence            57899999999999999999999999999999999999999998765  5679999999999999999999999999999


Q ss_pred             eEEEEcCCCCC--CCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccccCC
Q 025509           81 NILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKIN  158 (251)
Q Consensus        81 d~lv~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~  158 (251)
                      |+||||||+..  ++.++++++|++++++|+.|++.++|+++|+|.+++    ..++|+++||.++..            
T Consensus        80 DilVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~----~~g~Iv~isS~~~~~------------  143 (255)
T d1gega_          80 DVIVNNAGVAPSTPIESITPEIVDKVYNINVKGVIWGIQAAVEAFKKEG----HGGKIINACSQAGHV------------  143 (255)
T ss_dssp             CEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT----SCEEEEEECCGGGTS------------
T ss_pred             cEEEecccccccCcHHHhhhhhhhhhhhhcccchhhhhhhhcchhhhhc----cccccccccchhhcc------------
Confidence            99999999764  467889999999999999999999999999988762    468899999988876            


Q ss_pred             CCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccC
Q 025509          159 DPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  211 (251)
Q Consensus       159 ~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  211 (251)
                         +.++.+.|+++|+|+.+|+++||.|++++|  |+||+|+||+++|||+..
T Consensus       144 ---~~~~~~~Y~asKaal~~ltk~lA~el~~~g--IrVN~I~PG~i~T~~~~~  191 (255)
T d1gega_         144 ---GNPELAVYSSSKFAVRGLTQTAARDLAPLG--ITVNGYCPGIVKTPMWAE  191 (255)
T ss_dssp             ---CCTTBHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECSBSSHHHHH
T ss_pred             ---cCcccccchhCHHHHHhhHHHHHHHhhhhC--cEEEEEecCcccChHHhh
Confidence               778889999999999999999999999999  999999999999999764

>d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative oxidoreductase Rv2002
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=100.00  E-value=6.2e-44  Score=293.26  Aligned_cols=185  Identities=26%  Similarity=0.346  Sum_probs=172.0

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      |++|||||++|||+++|++|+++|++|++++|++++++++.+++     +..+.++++|++++++++++++++.+++|++
T Consensus         7 K~alITGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i   81 (244)
T d1nffa_           7 KVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAEL-----ADAARYVHLDVTQPAQWKAAVDTAVTAFGGL   81 (244)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHT-----GGGEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh-----hCcceEEEeecCCHHHHHHHHHHHHHHhCCC
Confidence            78999999999999999999999999999999998888877766     4568899999999999999999999999999


Q ss_pred             eEEEEcCCCCC--CCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccccCC
Q 025509           81 NILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKIN  158 (251)
Q Consensus        81 d~lv~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~  158 (251)
                      |+||||||...  ++.+++.++|++++++|+.+++.++|+++|+|+++     +.|+||++||.++..            
T Consensus        82 dilinnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~-----~~G~Ii~isS~~~~~------------  144 (244)
T d1nffa_          82 HVLVNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEA-----GRGSIINISSIEGLA------------  144 (244)
T ss_dssp             CEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----TCEEEEEECCGGGTS------------
T ss_pred             eEEEECCcccCCCchhhCCHHHHhHHhhcccchhhHHHHHHHhHHHhc-----CcceEEecccccccc------------
Confidence            99999999764  47788999999999999999999999999999987     579999999998876            


Q ss_pred             CCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCC
Q 025509          159 DPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRHN  212 (251)
Q Consensus       159 ~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~~  212 (251)
                         +.+++.+|+++|+|+.+|+++||.|++++|  |+||+|+||+++|+|....
T Consensus       145 ---~~~~~~~Y~asKaal~~ltk~lA~el~~~g--IrVN~I~PG~i~T~~~~~~  193 (244)
T d1nffa_         145 ---GTVACHGYTATKFAVRGLTKSTALELGPSG--IRVNSIHPGLVKTPMTDWV  193 (244)
T ss_dssp             ---CCTTBHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECCBCSGGGTTS
T ss_pred             ---ccccccchhhHHHHHHHHHHHHHHHhcccC--EEEEEEeeCCccChhHhhh
Confidence               778889999999999999999999999999  9999999999999997654

>d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Streptomyces coelicolor [TaxId: 1902]

Probab=100.00  E-value=9.5e-44  Score=294.82  Aligned_cols=187  Identities=29%  Similarity=0.386  Sum_probs=173.2

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      |++|||||++|||+++|++|+++|++|++++|++++++++.+++.+.  +.++.++++|++++++++++++++.+++|++
T Consensus         3 KValITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~l~~~--g~~~~~~~~Dvs~~~~v~~~~~~~~~~~g~i   80 (257)
T d2rhca1           3 EVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREA--GVEADGRTCDVRSVPEIEALVAAVVERYGPV   80 (257)
T ss_dssp             CEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT--TCCEEEEECCTTCHHHHHHHHHHHHHHTCSC
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc--CCcEEEEEeecCCHHHHHHHHHHHHHHhCCC
Confidence            78999999999999999999999999999999999999999998765  5679999999999999999999999999999


Q ss_pred             eEEEEcCCCCC--CCCcCCchhhHHHHHHHHHHHHHHHHHHHHH--HHHhhccCCCCceEEEEcCccccccccCCccccc
Q 025509           81 NILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDT--MKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDK  156 (251)
Q Consensus        81 d~lv~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~  156 (251)
                      |+||||||+..  ++.+++.++|++++++|+.++++++|+++|+  +.++     +.|+||+++|..+..          
T Consensus        81 DilVnnAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~~~~~~~-----~~g~Ii~i~S~~~~~----------  145 (257)
T d2rhca1          81 DVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLER-----GTGRIVNIASTGGKQ----------  145 (257)
T ss_dssp             SEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTTSHHHH-----TEEEEEEECCGGGTS----------
T ss_pred             CEEEecccccCCCChHHcCHHHHHHHHHHHhhhhhHHHHHHhHHHHHHhc-----CCccccccccccccc----------
Confidence            99999999764  4678899999999999999999999999997  4444     468999999988876          


Q ss_pred             CCCCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccC
Q 025509          157 INDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  211 (251)
Q Consensus       157 ~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  211 (251)
                           +.+++.+|++||+|+.+|+++||.|++++|  |+||+|+||+|+|+|...
T Consensus       146 -----~~~~~~~Y~asKaal~~ltk~lA~el~~~g--IrVN~I~PG~i~T~~~~~  193 (257)
T d2rhca1         146 -----GVVHAAPYSASKHGVVGFTKALGLELARTG--ITVNAVCPGFVETPMAAS  193 (257)
T ss_dssp             -----CCTTCHHHHHHHHHHHHHHHHHHHHTTTSE--EEEEEEEECSBCSHHHHH
T ss_pred             -----ccccchhHHHHHHHHHHHHHHHHHHhhhhC--cEEEEEeeCCCCCHHHHH
Confidence                 788899999999999999999999999999  999999999999999764

>d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Gluconate 5-dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=100.00  E-value=5.3e-44  Score=295.13  Aligned_cols=189  Identities=21%  Similarity=0.306  Sum_probs=173.4

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      |++|||||++|||+++|++|+++|++|++++|+.+++++..+++.+.+ +.++.++++|++++++++++++++.+++|++
T Consensus         6 K~~lITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~-g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i   84 (251)
T d1vl8a_           6 RVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKY-GVETMAFRCDVSNYEEVKKLLEAVKEKFGKL   84 (251)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHH-CCCEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHh-CCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            789999999999999999999999999999999999999998887765 5678999999999999999999999999999


Q ss_pred             eEEEEcCCCCC--CCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccccCC
Q 025509           81 NILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKIN  158 (251)
Q Consensus        81 d~lv~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~  158 (251)
                      |+||||||+..  ++.+++.++|++.+++|+.+++.++|+++|+|+++     +.|+||+++|..+...           
T Consensus        85 DiLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~-----~~G~Ii~i~S~~~~~~-----------  148 (251)
T d1vl8a_          85 DTVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRES-----DNPSIINIGSLTVEEV-----------  148 (251)
T ss_dssp             CEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTC-----SSCEEEEECCGGGTCC-----------
T ss_pred             CEEEECCCCCCCCChhhCCHHHHHHHHHhhhhhhhhhhhhhhhccccc-----ccccccccccchhccc-----------
Confidence            99999999753  46788999999999999999999999999999885     5789999999765431           


Q ss_pred             CCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccC
Q 025509          159 DPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  211 (251)
Q Consensus       159 ~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  211 (251)
                         +.++..+|+++|+|+.+|+++||.|++++|  |+||+|+||+++|+|.+.
T Consensus       149 ---~~~~~~~Y~asKaal~~lt~~lA~e~~~~g--IrVN~I~PG~i~T~~~~~  196 (251)
T d1vl8a_         149 ---TMPNISAYAASKGGVASLTKALAKEWGRYG--IRVNVIAPGWYRTKMTEA  196 (251)
T ss_dssp             ---CSSSCHHHHHHHHHHHHHHHHHHHHHGGGT--CEEEEEEECCBCSTTTHH
T ss_pred             ---cCccccchHHHHHhHHHHHHHHHHHhcccC--eEEEEEeeCcccCHHHHh
Confidence               566788999999999999999999999999  999999999999999774

>d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: D(-)-3-hydroxybutyrate dehydrogenase
species: Pseudomonas fragi [TaxId: 296]

Probab=100.00  E-value=8.4e-44  Score=295.62  Aligned_cols=189  Identities=30%  Similarity=0.320  Sum_probs=169.0

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCc-hhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCC
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDI-AAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQ   79 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~-~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~   79 (251)
                      |++|||||++|||+++|++|+++|++|++++|+. +.++++.+++.+.. +.++.++++|++++++++++++++.+++|+
T Consensus         5 K~alITGas~GIG~aiA~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~~~-g~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~   83 (260)
T d1x1ta1           5 KVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQH-GVKVLYDGADLSKGEAVRGLVDNAVRQMGR   83 (260)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEECCSCHHHHHHHHHHHHHHH-TSCEEEECCCTTSHHHHHHHHHHHHHHHSC
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHHHHhc-CCcEEEEECCCCCHHHHHHHHHHHHHHhCC
Confidence            7899999999999999999999999999999974 56777777776654 567999999999999999999999999999


Q ss_pred             eeEEEEcCCCCC--CCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccccC
Q 025509           80 LNILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKI  157 (251)
Q Consensus        80 id~lv~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~  157 (251)
                      +|+||||||+..  ++.+.+.++|++.+++|+.+++.++|+++|+|+++     +.|+||++||.++..           
T Consensus        84 iDiLVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~-----~~G~Iv~isS~~~~~-----------  147 (260)
T d1x1ta1          84 IDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQ-----GFGRIINIASAHGLV-----------  147 (260)
T ss_dssp             CSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----TCEEEEEECCGGGTS-----------
T ss_pred             CcEEEeecccccCCchhhhhHHhhhhhhhccccccccccchhhhhHhhc-----CCceEeeccccccee-----------
Confidence            999999999764  46788999999999999999999999999999987     579999999998876           


Q ss_pred             CCCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCC
Q 025509          158 NDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRHN  212 (251)
Q Consensus       158 ~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~~  212 (251)
                          +.+++.+|++||+|+.+|+++||.|++++|  |+||+|+||+++|+|.+..
T Consensus       148 ----~~~~~~~Y~asKaal~~lt~~lA~el~~~g--IrVN~I~PG~i~T~~~~~~  196 (260)
T d1x1ta1         148 ----ASANKSAYVAAKHGVVGFTKVTALETAGQG--ITANAICPGWVRTPLVEKQ  196 (260)
T ss_dssp             ----CCTTCHHHHHHHHHHHHHHHHHHHHHTTTT--EEEEEEEECCBCC------
T ss_pred             ----ccCCcchhhhhhhhHHHhHHHHHHHhchhC--cEEEEEecCCCCChhhhhh
Confidence                778889999999999999999999999999  9999999999999997653

>d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (s)-1-phenylethanol dehydrogenase
species: Azoarcus sp. ebn1 [TaxId: 76114]

Probab=100.00  E-value=1.3e-43  Score=292.27  Aligned_cols=188  Identities=29%  Similarity=0.389  Sum_probs=161.7

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      |++|||||++|||+++|+.|+++|++|++++|++..  +..+.+++.  +.++.++++|++|+++++++++++.+++|++
T Consensus         6 KvalVTGas~GIG~aia~~la~~Ga~V~~~~~~~~~--~~~~~~~~~--g~~~~~~~~Dvs~~~~v~~~~~~~~~~~G~i   81 (247)
T d2ew8a1           6 KLAVITGGANGIGRAIAERFAVEGADIAIADLVPAP--EAEAAIRNL--GRRVLTVKCDVSQPGDVEAFGKQVISTFGRC   81 (247)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCH--HHHHHHHHT--TCCEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCchH--HHHHHHHHc--CCcEEEEEeeCCCHHHHHHHHHHHHHHcCCC
Confidence            789999999999999999999999999999998653  222333332  5679999999999999999999999999999


Q ss_pred             eEEEEcCCCCC--CCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccccCC
Q 025509           81 NILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKIN  158 (251)
Q Consensus        81 d~lv~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~  158 (251)
                      |+||||||+..  ++.++++++|++.+++|+.+++.++|+++|+|+++     +.|+||++||.++..            
T Consensus        82 DilVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~-----~~G~Iv~isS~~~~~------------  144 (247)
T d2ew8a1          82 DILVNNAGIYPLIPFDELTFEQWKKTFEINVDSGFLMAKAFVPGMKRN-----GWGRIINLTSTTYWL------------  144 (247)
T ss_dssp             CEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----TCEEEEEECCGGGGS------------
T ss_pred             CEEEECCCCCCCCChHhCCHHHhhhhheeehhhhhHHHHHHHhHHHhc-----CCCCccccccchhcc------------
Confidence            99999999764  46788999999999999999999999999999987     579999999998876            


Q ss_pred             CCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCCcc
Q 025509          159 DPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRHNSL  214 (251)
Q Consensus       159 ~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~~~~  214 (251)
                         +.++..+|++||+|+.+|+++||.|++++|  |+||+|+||+++|++.+....
T Consensus       145 ---~~~~~~~Y~asKaal~~ltk~lA~ela~~g--IrVN~I~PG~i~T~~~~~~~~  195 (247)
T d2ew8a1         145 ---KIEAYTHYISTKAANIGFTRALASDLGKDG--ITVNAIAPSLVRTATTEASAL  195 (247)
T ss_dssp             ---CCSSCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECCC----------
T ss_pred             ---cCcccccchhhhccHHHHHHHHHHHhcccC--eEEEEEeeCCCCCcccccccc
Confidence               778889999999999999999999999999  999999999999999876443

>d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=100.00  E-value=9.5e-44  Score=294.89  Aligned_cols=190  Identities=25%  Similarity=0.256  Sum_probs=159.1

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcC-CC
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQH-HQ   79 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~-g~   79 (251)
                      |++|||||++|||+++|++|+++|++|++++|++++++++.+++.+.  +.++.++.+|++++++++++++++.+++ |+
T Consensus         9 K~alVTGas~GIG~aiA~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~--~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~g~   86 (259)
T d1xq1a_           9 KTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKK--GFQVTGSVCDASLRPEREKLMQTVSSMFGGK   86 (259)
T ss_dssp             CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT--TCCEEEEECCTTSHHHHHHHHHHHHHHHTTC
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc--CCceEEEeccCCCHHHHHHHHHHHHHHhCCC
Confidence            78999999999999999999999999999999999999999988775  4579999999999999999999999887 68


Q ss_pred             eeEEEEcCCCCC--CCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccccC
Q 025509           80 LNILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKI  157 (251)
Q Consensus        80 id~lv~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~  157 (251)
                      +|+||||||+..  ++.+++.++|++++++|+.+++.++|+++|+|+++     +.|+||++||..+..           
T Consensus        87 idilvnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~-----~~G~Iv~isS~~~~~-----------  150 (259)
T d1xq1a_          87 LDILINNLGAIRSKPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKAS-----GCGNIIFMSSIAGVV-----------  150 (259)
T ss_dssp             CSEEEEECCC------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----SSCEEEEEC-----------------
T ss_pred             cccccccccccCCCchhhCCHHHHHHHHHHHhhhheeeehhhhhccccc-----ccccccccccccccc-----------
Confidence            999999999764  47788999999999999999999999999999987     579999999988876           


Q ss_pred             CCCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCCcc
Q 025509          158 NDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRHNSL  214 (251)
Q Consensus       158 ~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~~~~  214 (251)
                          +.++..+|+++|+|+.+|+++||.|++++|  |+||+|+||+++|||......
T Consensus       151 ----~~~~~~~Y~asKaal~~lt~~lA~e~~~~g--IrVN~V~PG~i~T~~~~~~~~  201 (259)
T d1xq1a_         151 ----SASVGSIYSATKGALNQLARNLACEWASDG--IRANAVAPAVIATPLAEAVYD  201 (259)
T ss_dssp             --------CCHHHHHHHHHHHHHHHHHHHHGGGT--CEEEEEECCSCC---------
T ss_pred             ----cccccccccccccchhhhhHHHHHHhcccC--eEEEEeccCcccCHHhhhhch
Confidence                677888999999999999999999999999  999999999999999876443

>d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3beta/17beta hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=100.00  E-value=4.9e-44  Score=295.68  Aligned_cols=217  Identities=23%  Similarity=0.249  Sum_probs=182.3

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      |++|||||++|||+++|++|+++|++|++++|++++++++.+++     +.+..++++|++++++++++++++.+++|++
T Consensus         7 K~alITGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~~~~-----~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~i   81 (253)
T d1hxha_           7 KVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAEL-----GERSMFVRHDVSSEADWTLVMAAVQRRLGTL   81 (253)
T ss_dssp             CEEEETTTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHH-----CTTEEEECCCTTCHHHHHHHHHHHHHHHCSC
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh-----CCCeEEEEeecCCHHHHHHHHHHHHHHhCCC
Confidence            78999999999999999999999999999999999888887776     5678899999999999999999999999999


Q ss_pred             eEEEEcCCCCC--CCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccccCC
Q 025509           81 NILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKIN  158 (251)
Q Consensus        81 d~lv~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~  158 (251)
                      |+||||||+..  ++.+.+.++|++.+++|+.+++.++++++|+|+++      +|+||++||.++..            
T Consensus        82 DilVnnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~------~G~Iv~isS~~~~~------------  143 (253)
T d1hxha_          82 NVLVNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKET------GGSIINMASVSSWL------------  143 (253)
T ss_dssp             CEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTT------CEEEEEECCGGGTS------------
T ss_pred             CeEEecccccCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhc------CCceecccchhhhc------------
Confidence            99999999764  37788999999999999999999999999999763      69999999998876            


Q ss_pred             CCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCCcchhhhhhhhhhhhhHhhhccccChH
Q 025509          159 DPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRHNSLFRSMNTILHALPGIAGKCLLKNVQ  238 (251)
Q Consensus       159 ~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (251)
                         +.+...+|++||+|+.+|++++|.|++++|.+||||+|+||+++|++.+...............+....-..+-.|+
T Consensus       144 ---~~~~~~~Y~asKaal~~lt~~lA~e~~~~g~~IrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~gr~~~pe  220 (253)
T d1hxha_         144 ---PIEQYAGYSASKAAVSALTRAAALSCRKQGYAIRVNSIHPDGIYTPMMQASLPKGVSKEMVLHDPKLNRAGRAYMPE  220 (253)
T ss_dssp             ---CCTTBHHHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEESEECCHHHHHHSCTTCCHHHHBCBTTTBTTCCEECHH
T ss_pred             ---CccccccccchhHHHHHHHHHHHHHHhhcCCCEEEEEEeECCCcCHhHHhhCcchhhHHHHHhCccccccCCCCCHH
Confidence               77888999999999999999999999986555999999999999998764322222222222222222223344567


Q ss_pred             HHHHH
Q 025509          239 QVILN  243 (251)
Q Consensus       239 ~~~~~  243 (251)
                      +.+..
T Consensus       221 dvA~~  225 (253)
T d1hxha_         221 RIAQL  225 (253)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            76654

>d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: R-specific alcohol dehydrogenase
species: Lactobacillus brevis [TaxId: 1580]

Probab=100.00  E-value=2.4e-43  Score=291.30  Aligned_cols=215  Identities=23%  Similarity=0.239  Sum_probs=182.8

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      |++|||||++|||+++|+.|+++|++|++++|+++.++++.+++..   +.++.++++|++|+++++++++++.+++|++
T Consensus         7 K~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~~~~---~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~i   83 (251)
T d1zk4a1           7 KVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGT---PDQIQFFQHDSSDEDGWTKLFDATEKAFGPV   83 (251)
T ss_dssp             CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCC---TTTEEEEECCTTCHHHHHHHHHHHHHHHSSC
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCC---CCcEEEEEccCCCHHHHHHHHHHHHHHhCCc
Confidence            7899999999999999999999999999999999888888877632   4579999999999999999999999999999


Q ss_pred             eEEEEcCCCCC--CCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccccCC
Q 025509           81 NILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKIN  158 (251)
Q Consensus        81 d~lv~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~  158 (251)
                      |+||||||...  ++.+++.++|++++++|+.+++.++++++|+|++++    .+++||++||.++..            
T Consensus        84 DiLVnnAg~~~~~~~~~~~~~~~~~~~~vnl~g~~~~~~~~~~~m~~~~----~gg~Ii~isS~~~~~------------  147 (251)
T d1zk4a1          84 STLVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNKG----LGASIINMSSIEGFV------------  147 (251)
T ss_dssp             CEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSS----SCEEEEEECCGGGTS------------
T ss_pred             eEEEeccccccccchhcccccchhhhccccccccchhHHHHHHHHHhcC----CCCceEeeeccceec------------
Confidence            99999999763  477899999999999999999999999999998862    346999999988876            


Q ss_pred             CCCCCCcccccchhHHHHHHHHHHHHHH--hccCCCcEEEEEeeCCcccCCcccCCcchhhhhhhhhhhhhHhhhccccC
Q 025509          159 DPSGYNGFRAYSQSKLANILHANELARR--LKEDGVDITANSVHPGAIATNIIRHNSLFRSMNTILHALPGIAGKCLLKN  236 (251)
Q Consensus       159 ~~~~~~~~~~Y~~sK~a~~~~~~~la~e--~~~~g~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (251)
                         +.+...+|+++|+|+.+|++++|+|  +.++|  |+||+|+||+++|+|.+...............|    -..+-.
T Consensus       148 ---~~~~~~~Y~asKaal~~lt~~lA~e~~l~~~g--IrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~p----l~R~~~  218 (251)
T d1zk4a1         148 ---GDPSLGAYNASKGAVRIMSKSAALDCALKDYD--VRVNTVHPGYIKTPLVDDLPGAEEAMSQRTKTP----MGHIGE  218 (251)
T ss_dssp             ---CCTTCHHHHHHHHHHHHHHHHHHHHHHHTTCS--EEEEEEEECCBCCHHHHTSTTHHHHHTSTTTCT----TSSCBC
T ss_pred             ---cCCCchhHHHHHHHHhcchHHHHHHHhcCCCc--EEEEEEeCCCCCChhHHhcCCHHHHHHHHhCCC----CCCCcC
Confidence               7788899999999999999999999  45778  999999999999999876544333222222222    134556


Q ss_pred             hHHHHHH
Q 025509          237 VQQVILN  243 (251)
Q Consensus       237 ~~~~~~~  243 (251)
                      |++.+..
T Consensus       219 pedvA~~  225 (251)
T d1zk4a1         219 PNDIAYI  225 (251)
T ss_dssp             HHHHHHH
T ss_pred             HHHHHHH
Confidence            7777764

>d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Xylitol dehydrogenase
species: Gluconobacter oxydans [TaxId: 442]

Probab=100.00  E-value=2e-43  Score=293.22  Aligned_cols=186  Identities=23%  Similarity=0.258  Sum_probs=174.0

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      |++|||||++|||+++|+.|+++|++|++++|+++.++++.+++.+.  +.++.++++|++++++++++++++.+++|++
T Consensus         6 K~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~--g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i   83 (260)
T d1zema1           6 KVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREK--GVEARSYVCDVTSEEAVIGTVDSVVRDFGKI   83 (260)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTT--TSCEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc--CCcEEEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence            78999999999999999999999999999999999999999888765  5679999999999999999999999999999


Q ss_pred             eEEEEcCCCCC---CCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccccC
Q 025509           81 NILINNAGIMG---TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKI  157 (251)
Q Consensus        81 d~lv~~ag~~~---~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~  157 (251)
                      |+||||||...   ++.+++.++|++++++|+.+++.++++++|+|.++     +.|+||++||.++..           
T Consensus        84 DilVnnaG~~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~m~~~-----~~G~II~isS~~~~~-----------  147 (260)
T d1zema1          84 DFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVLKAVSRQMITQ-----NYGRIVNTASMAGVK-----------  147 (260)
T ss_dssp             CEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----TCEEEEEECCHHHHS-----------
T ss_pred             CeehhhhccccccCccccccHHHHHhhccccccccccchhhHHhhhhhh-----cCCCCCeeechhhcc-----------
Confidence            99999999753   36688999999999999999999999999999887     579999999998876           


Q ss_pred             CCCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCccc
Q 025509          158 NDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIR  210 (251)
Q Consensus       158 ~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~  210 (251)
                          +.+.+.+|+++|+|+.+|+++||.|++++|  |+||+|+||+|+|+++.
T Consensus       148 ----~~~~~~~Y~asKaal~~ltk~lA~el~~~g--IrVN~I~PG~v~T~~~~  194 (260)
T d1zema1         148 ----GPPNMAAYGTSKGAIIALTETAALDLAPYN--IRVNAISPGYMGPGFMW  194 (260)
T ss_dssp             ----CCTTBHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECSBCSSHHH
T ss_pred             ----CCcchHHHHHHHHHHHHHHHHHHHHhhhhC--CEEEEeccCcccCcchh
Confidence                778889999999999999999999999999  99999999999999864

>d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase
species: Streptomyces hydrogenans [TaxId: 1905]

Probab=100.00  E-value=1.4e-43  Score=292.80  Aligned_cols=185  Identities=25%  Similarity=0.294  Sum_probs=171.0

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      |++|||||++|||+++|++|+++|++|++++|+++++++..+++     +.++.++++|++++++++++++++.+++|++
T Consensus         6 K~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i   80 (254)
T d1hdca_           6 KTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATAREL-----GDAARYQHLDVTIEEDWQRVVAYAREEFGSV   80 (254)
T ss_dssp             SEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTT-----GGGEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh-----CCceEEEEcccCCHHHHHHHHHHHHHHcCCc
Confidence            78999999999999999999999999999999988887776654     5679999999999999999999999999999


Q ss_pred             eEEEEcCCCCC--CCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccccCC
Q 025509           81 NILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKIN  158 (251)
Q Consensus        81 d~lv~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~  158 (251)
                      |+||||||+..  ++.+.+.++|++.+++|+.+++.++|+++|+|+++     +.|+||++||.++..            
T Consensus        81 DilVnnAg~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~~-----~~G~II~isS~~~~~------------  143 (254)
T d1hdca_          81 DGLVNNAGISTGMFLETESVERFRKVVEINLTGVFIGMKTVIPAMKDA-----GGGSIVNISSAAGLM------------  143 (254)
T ss_dssp             CEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----TCEEEEEECCGGGTS------------
T ss_pred             cEEEecCccccccccccccccccchhhhHHhhHHHHHHHHHHHHHhhc-----CCCeecccccchhcc------------
Confidence            99999999764  36788999999999999999999999999999987     579999999998876            


Q ss_pred             CCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCC
Q 025509          159 DPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRHN  212 (251)
Q Consensus       159 ~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~~  212 (251)
                         +.++.++|++||+|+.+|+++||.|++++|  |+||+|+||+++|+|....
T Consensus       144 ---~~~~~~~Y~asKaal~~lt~~lA~e~a~~g--IrVN~I~PG~v~T~~~~~~  192 (254)
T d1hdca_         144 ---GLALTSSYGASKWGVRGLSKLAAVELGTDR--IRVNSVHPGMTYTPMTAET  192 (254)
T ss_dssp             ---CCTTCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECSBCCHHHHHH
T ss_pred             ---cccchhhHHHHHHHHHHHHHHHHHHhCCCc--eEEEEeeeCcccCccchhc
Confidence               778889999999999999999999999999  9999999999999987643

>d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase
species: Bacillus megaterium [TaxId: 1404]

Probab=100.00  E-value=6.7e-43  Score=289.99  Aligned_cols=216  Identities=25%  Similarity=0.301  Sum_probs=181.5

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCch-hHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCC
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIA-AGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQ   79 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~-~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~   79 (251)
                      |++|||||++|||+++|++|+++|++|++++|+.+ .++++.+++.+.  +.++.++++|++++++++++++++.+++|+
T Consensus         8 K~alITGas~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~--g~~~~~~~~Dvt~~~~v~~~~~~~~~~~G~   85 (261)
T d1geea_           8 KVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKV--GGEAIAVKGDVTVESDVINLVQSAIKEFGK   85 (261)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT--TCEEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHHHhc--CCcEEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence            78999999999999999999999999999999854 567777777654  568999999999999999999999999999


Q ss_pred             eeEEEEcCCCCC--CCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccccC
Q 025509           80 LNILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKI  157 (251)
Q Consensus        80 id~lv~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~  157 (251)
                      +|+||||||+..  ++.+++.++|++.+++|+.+++.++|+++|+|+++.    .+++|+++||.++..           
T Consensus        86 iDiLVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~----~g~~Iv~isS~~~~~-----------  150 (261)
T d1geea_          86 LDVMINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVEND----IKGTVINMSSVHEKI-----------  150 (261)
T ss_dssp             CCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT----CCCEEEEECCGGGTS-----------
T ss_pred             CCEeeccceecCCcchhhcCHHHHHHHHHHhcccchhHHHHHhhhhcccc----ccccccccccchhcc-----------
Confidence            999999999764  367889999999999999999999999999998862    355799999988876           


Q ss_pred             CCCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCCcch-hhhhhhhhhhhhHhhhccccC
Q 025509          158 NDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRHNSLF-RSMNTILHALPGIAGKCLLKN  236 (251)
Q Consensus       158 ~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~  236 (251)
                          +.+.+.+|+++|+|+.+|+++||.|++++|  |+||+|+||+|+|++....... .....+....|    -..+-.
T Consensus       151 ----~~~~~~~Y~asKaal~~lt~~lA~e~~~~g--IrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~p----l~R~~~  220 (261)
T d1geea_         151 ----PWPLFVHYAASKGGMKLMTETLALEYAPKG--IRVNNIGPGAINTPINAEKFADPEQRADVESMIP----MGYIGE  220 (261)
T ss_dssp             ----CCTTCHHHHHHHHHHHHHHHHHHHHHGGGT--CEEEEEEECSBCSGGGHHHHHSHHHHHHHHTTCT----TSSCBC
T ss_pred             ----cCccccccccCCccchhhHHHHHHHhhhhC--cEEEEEeeCcCcCHhHhhhcCCHHHHHHHHhcCC----CCCCCC
Confidence                788889999999999999999999999999  9999999999999997643211 12222222222    234456


Q ss_pred             hHHHHHH
Q 025509          237 VQQVILN  243 (251)
Q Consensus       237 ~~~~~~~  243 (251)
                      |++.+..
T Consensus       221 pediA~~  227 (261)
T d1geea_         221 PEEIAAV  227 (261)
T ss_dssp             HHHHHHH
T ss_pred             HHHHHHH
Confidence            7777664

>d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sorbitol dehydrogenase
species: Rhodobacter sphaeroides [TaxId: 1063]

Probab=100.00  E-value=4e-43  Score=290.79  Aligned_cols=185  Identities=24%  Similarity=0.355  Sum_probs=171.3

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      |++|||||++|||+++|++|+++|++|++++|+.++++++.+++     +.++.++++|++++++++++++++.+++|++
T Consensus         6 K~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~-----~~~~~~~~~Dvt~~~~v~~~~~~~~~~~g~i   80 (256)
T d1k2wa_           6 KTALITGSARGIGRAFAEAYVREGARVAIADINLEAARATAAEI-----GPAACAIALDVTDQASIDRCVAELLDRWGSI   80 (256)
T ss_dssp             EEEEEETCSSHHHHHHHHHHHHTTEEEEEEESCHHHHHHHHHHH-----CTTEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh-----CCceEEEEeeCCCHHHHHHHHHHHHHHhCCc
Confidence            68999999999999999999999999999999998888887776     6779999999999999999999999999999


Q ss_pred             eEEEEcCCCCC--CCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccccCC
Q 025509           81 NILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKIN  158 (251)
Q Consensus        81 d~lv~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~  158 (251)
                      |+||||||+..  ++.+++.++|++.+++|+.+++.++|+++|+|.++.    ..|+||++||.++..            
T Consensus        81 DilVnnAg~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~~~~~~----~~g~Iv~isS~~~~~------------  144 (256)
T d1k2wa_          81 DILVNNAALFDLAPIVEITRESYDRLFAINVSGTLFMMQAVARAMIAGG----RGGKIINMASQAGRR------------  144 (256)
T ss_dssp             CEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT----SCEEEEEECCGGGTS------------
T ss_pred             cEEEeecccccccccccCCHHHHHhhhceeeeccccchhhccchhHHhc----cCCccccccchhhcc------------
Confidence            99999999754  467889999999999999999999999999977752    469999999998876            


Q ss_pred             CCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccC
Q 025509          159 DPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  211 (251)
Q Consensus       159 ~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  211 (251)
                         +.+..++|++||+|+.+|+++||.|++++|  |+||+|+||+++|++++.
T Consensus       145 ---~~~~~~~Y~asKaal~~lt~~lA~el~~~g--IrVN~V~PG~i~T~~~~~  192 (256)
T d1k2wa_         145 ---GEALVGVYCATKAAVISLTQSAGLNLIRHG--INVNAIAPGVVDGEHWDG  192 (256)
T ss_dssp             ---CCTTCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECCBCCTTHHH
T ss_pred             ---ccccccchhhhhhHHHHHHHHHHHHhcccC--eEEEEEecCCCCchhhhh
Confidence               788889999999999999999999999999  999999999999999764

>d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus [TaxId: 274]

Probab=100.00  E-value=2.3e-42  Score=283.83  Aligned_cols=208  Identities=24%  Similarity=0.294  Sum_probs=174.9

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      |++|||||++|||+++|++|+++|++|++++|+++++++..+++       +..++++|++++++++++++++.+++|++
T Consensus         6 K~~lITGas~GIG~aia~~l~~~G~~V~~~~r~~~~l~~~~~~~-------~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i   78 (242)
T d1ulsa_           6 KAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAV-------GAHPVVMDVADPASVERGFAEALAHLGRL   78 (242)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTT-------TCEEEECCTTCHHHHHHHHHHHHHHHSSC
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHc-------CCeEEEEecCCHHHHHHHHHHHHHhcCCc
Confidence            78999999999999999999999999999999988877766533       46789999999999999999999999999


Q ss_pred             eEEEEcCCCCC--CCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccccCC
Q 025509           81 NILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKIN  158 (251)
Q Consensus        81 d~lv~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~  158 (251)
                      |+||||||+..  ++.+.+.++|++.+++|+.+++.++|+++|+|.++     +.+.++++||. +..            
T Consensus        79 DilVnnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~-----~~~~i~~~ss~-~~~------------  140 (242)
T d1ulsa_          79 DGVVHYAGITRDNFHWKMPLEDWELVLRVNLTGSFLVAKAASEAMREK-----NPGSIVLTASR-VYL------------  140 (242)
T ss_dssp             CEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTT-----CCEEEEEECCG-GGG------------
T ss_pred             eEEEECCcccccCchhhCcchhhhccccccchhhhhhhhhcccccccc-----ccceeeeeccc-ccc------------
Confidence            99999999764  46788999999999999999999999999999885     46777777764 333            


Q ss_pred             CCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCCcchhhhhhhhhhhhhHhhhccccChH
Q 025509          159 DPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRHNSLFRSMNTILHALPGIAGKCLLKNVQ  238 (251)
Q Consensus       159 ~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (251)
                         +.++..+|+++|+|+.+|+++||+|++++|  ||||+|+||+++|++....+. ...+......|    -..+-+|+
T Consensus       141 ---~~~~~~~Y~asKaal~~ltk~lA~ela~~g--IrVN~I~PG~v~T~~~~~~~~-~~~~~~~~~~p----l~R~~~pe  210 (242)
T d1ulsa_         141 ---GNLGQANYAASMAGVVGLTRTLALELGRWG--IRVNTLAPGFIETRMTAKVPE-KVREKAIAATP----LGRAGKPL  210 (242)
T ss_dssp             ---CCTTCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECSBCCTTTSSSCH-HHHHHHHHTCT----TCSCBCHH
T ss_pred             ---CCCCCcchHHHHHHHHHHHHHHHHHHhhhC--cEEEEEeeCcccChhhhcCCH-HHHHHHHhcCC----CCCCCCHH
Confidence               677888999999999999999999999999  999999999999999876543 22222222222    23445677


Q ss_pred             HHHHH
Q 025509          239 QVILN  243 (251)
Q Consensus       239 ~~~~~  243 (251)
                      +.+..
T Consensus       211 dia~~  215 (242)
T d1ulsa_         211 EVAYA  215 (242)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            76654

>d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 17-beta-hydroxysteroid dehydrogenase type XI
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4e-43  Score=288.45  Aligned_cols=190  Identities=26%  Similarity=0.316  Sum_probs=173.2

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      |++||||||+|||+++|++|+++|++|++++|++++++++.+++.+.  +.++.++.||++|.++++++++++.+++|++
T Consensus         8 kv~lITGas~GIG~~ia~~la~~G~~V~l~~r~~~~l~~~~~~~~~~--~~~~~~~~~Dvs~~~~v~~~~~~i~~~~g~i   85 (244)
T d1yb1a_           8 EIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGL--GAKVHTFVVDCSNREDIYSSAKKVKAEIGDV   85 (244)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT--TCCEEEEECCTTCHHHHHHHHHHHHHHTCCC
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc--CCcEEEEEeeCCCHHHHHHHHHHHHHHcCCC
Confidence            68999999999999999999999999999999999999999998765  5679999999999999999999999999999


Q ss_pred             eEEEEcCCCCC--CCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccccCC
Q 025509           81 NILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKIN  158 (251)
Q Consensus        81 d~lv~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~  158 (251)
                      |++|||||...  +..+.+.++|++++++|+.|++.++++++|+|+++     +.|+||++||.++..            
T Consensus        86 dilinnag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~-----~~G~Iv~isS~~~~~------------  148 (244)
T d1yb1a_          86 SILVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKN-----NHGHIVTVASAAGHV------------  148 (244)
T ss_dssp             SEEEECCCCCCCCCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHHT-----TCEEEEEECCCC-CC------------
T ss_pred             ceeEeeccccccccccccchhHHHhhcceeeeccHHHHHHHhhhHHhc-----CCceEEEeecchhcC------------
Confidence            99999999764  36677889999999999999999999999999986     579999999998876            


Q ss_pred             CCCCCCcccccchhHHHHHHHHHHHHHHhccCC-CcEEEEEeeCCcccCCcccCC
Q 025509          159 DPSGYNGFRAYSQSKLANILHANELARRLKEDG-VDITANSVHPGAIATNIIRHN  212 (251)
Q Consensus       159 ~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g-~~i~v~~v~Pg~v~t~~~~~~  212 (251)
                         +.++++.|++||+|+.+|+++|+.|+++.+ .+|+||+|+||+|+|++.+..
T Consensus       149 ---~~~~~~~Y~asKaal~~~~~~La~El~~~~~~gI~V~~i~PG~v~T~~~~~~  200 (244)
T d1yb1a_         149 ---SVPFLLAYCSSKFAAVGFHKTLTDELAALQITGVKTTCLCPNFVNTGFIKNP  200 (244)
T ss_dssp             ---CHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCTTEEEEEEEETHHHHCSTTCT
T ss_pred             ---CCCCcHHHHHHHHHHHHHHHHHHHHHHhhcCCCEEEEEEEcCCCCChhhhCc
Confidence               778889999999999999999999997632 129999999999999998753

>d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Retinal dehydrogenase/reductase 3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5.3e-43  Score=288.77  Aligned_cols=182  Identities=26%  Similarity=0.359  Sum_probs=166.7

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      |++|||||++|||+++|++|+++|++|++++|+++.++++.+++      ..+.++++|++|+++++++++++.+++|++
T Consensus         7 K~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~~------~~~~~~~~Dvs~~~~v~~~~~~~~~~~g~i   80 (250)
T d1ydea1           7 KVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQEL------PGAVFILCDVTQEDDVKTLVSETIRRFGRL   80 (250)
T ss_dssp             CEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHC------TTEEEEECCTTSHHHHHHHHHHHHHHHSCC
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhc------CCCeEEEccCCCHHHHHHHHHHHHHhcCCC
Confidence            78999999999999999999999999999999988877765543      357889999999999999999999999999


Q ss_pred             eEEEEcCCCCC---CCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccccC
Q 025509           81 NILINNAGIMG---TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKI  157 (251)
Q Consensus        81 d~lv~~ag~~~---~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~  157 (251)
                      |+||||||...   ++.+.+.++|++++++|+.+++.++|+++|+|+++      .|+||++||.++..           
T Consensus        81 DilVnnAG~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~------~G~Ii~isS~~~~~-----------  143 (250)
T d1ydea1          81 DCVVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKS------QGNVINISSLVGAI-----------  143 (250)
T ss_dssp             CEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH------TCEEEEECCHHHHH-----------
T ss_pred             CEEEecccccccccccccccHHHHHHHHHHhhhhHHHHHHHhhHHHHhC------CCCCcccccccccc-----------
Confidence            99999999653   25578999999999999999999999999999874      58999999999887           


Q ss_pred             CCCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccC
Q 025509          158 NDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  211 (251)
Q Consensus       158 ~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  211 (251)
                          +.+...+|+++|+|+.+|+++||+|++++|  |+||+|+||+|+|+|.+.
T Consensus       144 ----~~~~~~~Y~asKaal~~lt~~lA~e~a~~g--IrVN~I~PG~i~T~~~~~  191 (250)
T d1ydea1         144 ----GQAQAVPYVATKGAVTAMTKALALDESPYG--VRVNCISPGNIWTPLWEE  191 (250)
T ss_dssp             ----CCTTCHHHHHHHHHHHHHHHHHHHHHGGGT--CEEEEEEECSBCCHHHHH
T ss_pred             ----cccCcchhHHHHhhHHHHHHHHHHHhcccC--eEEEEEeeCCCCChhHHH
Confidence                778889999999999999999999999999  999999999999998753

>d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein TTHA0369
species: Thermus thermophilus [TaxId: 274]

Probab=100.00  E-value=8.1e-43  Score=287.42  Aligned_cols=181  Identities=27%  Similarity=0.320  Sum_probs=164.4

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      |++|||||++|||+++|++|+++|++|++++|+++.. +..+++       ...++++|++++++++++++++.+++|++
T Consensus         6 K~alITGas~GIG~aia~~la~~G~~V~~~~~~~~~~-~~~~~~-------~~~~~~~Dv~~~~~v~~~~~~~~~~~G~i   77 (248)
T d2d1ya1           6 KGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEGK-EVAEAI-------GGAFFQVDLEDERERVRFVEEAAYALGRV   77 (248)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTHH-HHHHHH-------TCEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHH-HHHHHc-------CCeEEEEeCCCHHHHHHHHHHHHHhcCCC
Confidence            7899999999999999999999999999999997653 333332       34678999999999999999999999999


Q ss_pred             eEEEEcCCCCC--CCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccccCC
Q 025509           81 NILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKIN  158 (251)
Q Consensus        81 d~lv~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~  158 (251)
                      |+||||||+..  ++.+++.++|++.+++|+.+++.++|+++|+|+++     +.|+||++||.++..            
T Consensus        78 DiLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~-----~~G~Ii~isS~~~~~------------  140 (248)
T d2d1ya1          78 DVLVNNAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKV-----GGGAIVNVASVQGLF------------  140 (248)
T ss_dssp             CEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTT-----TCEEEEEECCGGGTS------------
T ss_pred             CeEEEeCcCCCCCChhhCCHHHHHHHHHhhhhhHhhhhhhhccccccc-----ccccccccccccccc------------
Confidence            99999999764  47788999999999999999999999999999986     579999999998876            


Q ss_pred             CCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccC
Q 025509          159 DPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  211 (251)
Q Consensus       159 ~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  211 (251)
                         +.++..+|+++|+|+.+|+++||+|++++|  |+||+|+||+++||+.+.
T Consensus       141 ---~~~~~~~Y~asKaal~~ltk~lA~el~~~g--IrVN~I~PG~v~T~~~~~  188 (248)
T d2d1ya1         141 ---AEQENAAYNASKGGLVNLTRSLALDLAPLR--IRVNAVAPGAIATEAVLE  188 (248)
T ss_dssp             ---BCTTBHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECSBCCHHHHH
T ss_pred             ---cccccchhHHHHHHHHHHHHHHHHHhhhhC--cEEEEEeeCCCCCchHHH
Confidence               788899999999999999999999999999  999999999999998653

>d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase (5l265)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=100.00  E-value=2.9e-42  Score=286.90  Aligned_cols=190  Identities=26%  Similarity=0.291  Sum_probs=163.9

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhC-CCCceEEEEecCCCHHHHHHHHHHHHhcCCC
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEI-PSAKVDAMELDLSSLASVRNFASEYNIQHHQ   79 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~-~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~   79 (251)
                      |++|||||++|||+++|++|+++|++|++++|++++++++.+++.+.. ++.++.++++|++++++++++++++.+++|+
T Consensus         6 KvalVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~~~g~   85 (264)
T d1spxa_           6 KVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEILSTTLGKFGK   85 (264)
T ss_dssp             CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred             CEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCcCceEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence            789999999999999999999999999999999999999999988753 3456999999999999999999999999999


Q ss_pred             eeEEEEcCCCCC------CCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccc-cccccCCc
Q 025509           80 LNILINNAGIMG------TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGH-RLAYHEGI  152 (251)
Q Consensus        80 id~lv~~ag~~~------~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~-~~~~~~~~  152 (251)
                      +|+||||||...      +..+.+.|+|+..+++|+.+++.++|+++|+|+++      .|.+|+++|..+ ..      
T Consensus        86 iDilvnnAG~~~~~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~p~m~~~------~g~iI~~~S~~~~~~------  153 (264)
T d1spxa_          86 LDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRSVIALTKKAVPHLSST------KGEIVNISSIASGLH------  153 (264)
T ss_dssp             CCEEEECCC-------------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH------TCEEEEECCTTSSSS------
T ss_pred             CCEeecccccccCCccccccccCCHHHHHHHHHHhHHHHHHHHhhhCCccccc------cCcceeeeeeccccc------
Confidence            999999999742      23456889999999999999999999999999875      567777777654 33      


Q ss_pred             ccccCCCCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCCc
Q 025509          153 RFDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRHNS  213 (251)
Q Consensus       153 ~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~~~  213 (251)
                               +.+...+|+++|+|+.+|+++||.|++++|  |+||+|+||+|+|+|.....
T Consensus       154 ---------~~~~~~~Y~asKaal~~lt~~lA~el~~~g--IrVN~V~PG~v~T~~~~~~~  203 (264)
T d1spxa_         154 ---------ATPDFPYYSIAKAAIDQYTRNTAIDLIQHG--IRVNSISPGLVATGFGSAMG  203 (264)
T ss_dssp             ---------CCTTSHHHHHHHHHHHHHHHHHHHHHGGGT--CEEEEEEECCBCCCC-----
T ss_pred             ---------cCCCchhhhhhhhhHHHHHHHHHHHhcccC--eEEEEEeeCCCCCcchhccC
Confidence                     677888999999999999999999999999  99999999999999977543

>d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=100.00  E-value=1.2e-42  Score=284.48  Aligned_cols=203  Identities=25%  Similarity=0.323  Sum_probs=169.8

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      |++|||||++|||+++|++|+++|++|++++|+.+.             ...+..+++|++|+++++++++++.+++|++
T Consensus         8 K~~lITGas~GIG~aia~~la~~Ga~V~~~~r~~~~-------------~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i   74 (237)
T d1uzma1           8 RSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGA-------------PKGLFGVEVDVTDSDAVDRAFTAVEEHQGPV   74 (237)
T ss_dssp             CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSSCC-------------CTTSEEEECCTTCHHHHHHHHHHHHHHHSSC
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCcch-------------hcCceEEEEecCCHHHHHHHHHHHHHhcCCc
Confidence            789999999999999999999999999999998754             3467889999999999999999999999999


Q ss_pred             eEEEEcCCCCC--CCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccccCC
Q 025509           81 NILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKIN  158 (251)
Q Consensus        81 d~lv~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~  158 (251)
                      |+||||||+..  ++.+.+.|+|++++++|+.+++.++|+++|+|+++     +.|+||++||.++..            
T Consensus        75 DiLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~-----~~g~Iv~isS~~~~~------------  137 (237)
T d1uzma1          75 EVLVSNAGLSADAFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRN-----KFGRMIFIGSVSGLW------------  137 (237)
T ss_dssp             SEEEEECSCCC-----CCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT-----TCEEEEEECCCCC--------------
T ss_pred             eEEEeeecccccccHhhCCHHHHHHHHHhhhhhhhhhhhhhhhccccc-----CCCceEEEcchhhcc------------
Confidence            99999999764  36788999999999999999999999999999986     578999999988876            


Q ss_pred             CCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCCcchhhhhhhhhhhhhHhhhccccChH
Q 025509          159 DPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRHNSLFRSMNTILHALPGIAGKCLLKNVQ  238 (251)
Q Consensus       159 ~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (251)
                         +.++..+|++||+|+.+|+++|+.|++++|  |+||+|+||+++|+|.+.... ..........|    -..+-+|+
T Consensus       138 ---~~~~~~~Y~asKaal~~lt~~lA~e~~~~g--IrVN~I~PG~v~T~~~~~~~~-~~~~~~~~~~p----l~R~~~pe  207 (237)
T d1uzma1         138 ---GIGNQANYAASKAGVIGMARSIARELSKAN--VTANVVAPGYIDTDMTRALDE-RIQQGALQFIP----AKRVGTPA  207 (237)
T ss_dssp             ------CCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECSBCCHHHHHSCH-HHHHHHGGGCT----TCSCBCHH
T ss_pred             ---CCcccHHHHHHHHHHHHHHHHHHhhhhcCC--ceeeeeeeCcCCChhhhccCH-HHHHHHHhcCC----CCCCcCHH
Confidence               678889999999999999999999999999  999999999999999876432 22222222222    23455677


Q ss_pred             HHHHH
Q 025509          239 QVILN  243 (251)
Q Consensus       239 ~~~~~  243 (251)
                      +.+..
T Consensus       208 dvA~~  212 (237)
T d1uzma1         208 EVAGV  212 (237)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            77764

>d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 15-hydroxyprostaglandin dehydrogenase, PGDH
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3e-42  Score=285.19  Aligned_cols=218  Identities=24%  Similarity=0.288  Sum_probs=183.8

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      |++|||||++|||+++|++|+++|++|++++|+.+++++..+++.+..++.++.++++|++++++++++++++.+++|++
T Consensus         4 KvalITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~i   83 (254)
T d2gdza1           4 KVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRKVVDHFGRL   83 (254)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHHHHHHHHSCC
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhcCCCcEEEEEeecCCHHHHHHHHHHHHHHcCCc
Confidence            79999999999999999999999999999999999999999999887777789999999999999999999999999999


Q ss_pred             eEEEEcCCCCCCCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccccCCCC
Q 025509           81 NILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDP  160 (251)
Q Consensus        81 d~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~  160 (251)
                      |+||||||+..      .++|++.+++|+.+++.++++++|+|.++..  +..|+||++||.++..              
T Consensus        84 DilVnnAg~~~------~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~--~~~g~Iv~isS~~~~~--------------  141 (254)
T d2gdza1          84 DILVNNAGVNN------EKNWEKTLQINLVSVISGTYLGLDYMSKQNG--GEGGIIINMSSLAGLM--------------  141 (254)
T ss_dssp             CEEEECCCCCC------SSSHHHHHHHHTHHHHHHHHHHHHHHCGGGT--CCCEEEEEECCGGGTS--------------
T ss_pred             Ceecccccccc------cccchheeeeehhhHHHHHHHHHHHHHHhhc--CCCcEEEeeccHhhcc--------------
Confidence            99999999743      4569999999999999999999999987632  2358999999998876              


Q ss_pred             CCCCcccccchhHHHHHHHHHH--HHHHhccCCCcEEEEEeeCCcccCCcccCCcchhhhhh---hhhhhhhHhhhcccc
Q 025509          161 SGYNGFRAYSQSKLANILHANE--LARRLKEDGVDITANSVHPGAIATNIIRHNSLFRSMNT---ILHALPGIAGKCLLK  235 (251)
Q Consensus       161 ~~~~~~~~Y~~sK~a~~~~~~~--la~e~~~~g~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~  235 (251)
                       +.+..++|++||+|+.+|+++  |+.|++++|  ||||+|+||+|+|+|++..........   ........+....+.
T Consensus       142 -~~~~~~~Y~asKaal~~ltrs~ala~e~~~~g--IrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~  218 (254)
T d2gdza1         142 -PVAQQPVYCASKHGIVGFTRSAALAANLMNSG--VRLNAICPGFVNTAILESIEKEENMGQYIEYKDHIKDMIKYYGIL  218 (254)
T ss_dssp             -CCTTCHHHHHHHHHHHHHHHHHHHHHHHHTCC--EEEEEEEESCBSSHHHHGGGCHHHHGGGGGGHHHHHHHHHHHCCB
T ss_pred             -CCCCccchHHHHHHHHHHHHHHHHHHHhcCCC--EEEEEEEcCCCCChhhhhccccccccccHHHHHHHHhcCCCCCCc
Confidence             788889999999999999997  788999999  999999999999999875433222111   111222223334556


Q ss_pred             ChHHHHHH
Q 025509          236 NVQQVILN  243 (251)
Q Consensus       236 ~~~~~~~~  243 (251)
                      +|++.+..
T Consensus       219 ~pedvA~~  226 (254)
T d2gdza1         219 DPPLIANG  226 (254)
T ss_dssp             CHHHHHHH
T ss_pred             CHHHHHHH
Confidence            67777664

>d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Rhizome secoisolariciresinol dehydrogenase
species: Mayapple (Podophyllum peltatum) [TaxId: 35933]

Probab=100.00  E-value=5.2e-42  Score=285.92  Aligned_cols=187  Identities=24%  Similarity=0.337  Sum_probs=168.7

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      |++|||||++|||+++|++|+++|++|++++|++++++++.+++..   ...+.++++|++++++++++++++.+++|++
T Consensus         7 KvalITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~---~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i   83 (268)
T d2bgka1           7 KVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGS---PDVISFVHCDVTKDEDVRNLVDTTIAKHGKL   83 (268)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCC---TTTEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhcC---CCceEEEEccCCCHHHHHHHHHHHHHHcCCc
Confidence            7899999999999999999999999999999999999988888743   3458889999999999999999999999999


Q ss_pred             eEEEEcCCCCCC----CCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCccccc
Q 025509           81 NILINNAGIMGT----PFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDK  156 (251)
Q Consensus        81 d~lv~~ag~~~~----~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~  156 (251)
                      |+||||||+...    +.+.+.++|++++++|+.+++.++|+++|+|+++     +.|+||++||..+..          
T Consensus        84 D~lVnnAG~~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~-----~~g~ii~iss~~~~~----------  148 (268)
T d2bgka1          84 DIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAARVMIPA-----KKGSIVFTASISSFT----------  148 (268)
T ss_dssp             CEEEECCCCCCSSCSSTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHGGG-----TCEEEEEECCGGGTC----------
T ss_pred             ceeccccccccCCCcccccCcHHHHHHHHHHhhcchhhhhhhhcchHhhc-----CCCCccccccccccc----------
Confidence            999999997532    4577889999999999999999999999999886     579999999988765          


Q ss_pred             CCCCCCCCc-ccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCC
Q 025509          157 INDPSGYNG-FRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRHN  212 (251)
Q Consensus       157 ~~~~~~~~~-~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~~  212 (251)
                           +.++ ...|+++|+|+.+|+++||.|++++|  |+||+|+||+++|+|....
T Consensus       149 -----~~~~~~~~Y~asKaal~~lt~~lA~el~~~g--IrVN~I~PG~i~T~~~~~~  198 (268)
T d2bgka1         149 -----AGEGVSHVYTATKHAVLGLTTSLCTELGEYG--IRVNCVSPYIVASPLLTDV  198 (268)
T ss_dssp             -----CCTTSCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEESCCSCCCCTTS
T ss_pred             -----cccccccccchhHHHHHhCHHHHHHHhChhC--eEEEecCCCCccChHHhhh
Confidence                 3333 44899999999999999999999999  9999999999999998754

>d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein R05D8.7
species: Caenorhabditis elegans [TaxId: 6239]

Probab=100.00  E-value=6.2e-42  Score=286.04  Aligned_cols=190  Identities=24%  Similarity=0.267  Sum_probs=168.7

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhC-CCCceEEEEecCCCHHHHHHHHHHHHhcCCC
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEI-PSAKVDAMELDLSSLASVRNFASEYNIQHHQ   79 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~-~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~   79 (251)
                      |++|||||++|||+++|++|+++|++|++++|++++++++.+++.+.. ++.++.++++|++++++++++++++.+++|+
T Consensus         6 K~alVTGas~GIG~aia~~la~~Ga~V~l~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~~~~~g~   85 (272)
T d1xkqa_           6 KTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQIINSTLKQFGK   85 (272)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred             CEEEEeCcCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCCceEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence            789999999999999999999999999999999999999999987753 3457999999999999999999999999999


Q ss_pred             eeEEEEcCCCCCC--C----CcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCc-cccccccCCc
Q 025509           80 LNILINNAGIMGT--P----FMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSE-GHRLAYHEGI  152 (251)
Q Consensus        80 id~lv~~ag~~~~--~----~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~-~~~~~~~~~~  152 (251)
                      +|+||||||...+  +    .+.+.++|++++++|+.+++.++|+++|+|+++      .|.+|+++|. ++..      
T Consensus        86 iDilvnnAG~~~~~~~~~~~~d~~~~~~~~~~~vNl~~~~~~~~~~~p~m~~~------~g~iI~~~Ss~a~~~------  153 (272)
T d1xkqa_          86 IDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQAVIEMTKKVKPHLVAS------KGEIVNVSSIVAGPQ------  153 (272)
T ss_dssp             CCEEEECCCCCCCCTTCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH------TCEEEEECCGGGSSS------
T ss_pred             ceEEEeCCcccCcccccccchhccHHHHHHHHHhhhhHHHHHHHhhccccccc------CCccccccchhcccc------
Confidence            9999999997643  2    345667899999999999999999999999875      4566666664 4444      


Q ss_pred             ccccCCCCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCCc
Q 025509          153 RFDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRHNS  213 (251)
Q Consensus       153 ~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~~~  213 (251)
                               +.+++..|+++|+|+.+|+++||.|++++|  |+||+|+||+|+|+|.....
T Consensus       154 ---------~~~~~~~Y~asKaal~~ltk~lA~el~~~g--IrVN~I~PG~i~T~~~~~~~  203 (272)
T d1xkqa_         154 ---------AQPDFLYYAIAKAALDQYTRSTAIDLAKFG--IRVNSVSPGMVETGFTNAMG  203 (272)
T ss_dssp             ---------CCCSSHHHHHHHHHHHHHHHHHHHHHHTTT--CEEEEEEECCBCSSHHHHTT
T ss_pred             ---------CCCCcchhhhHHHHHHHHHHHHHHHhcccC--eEEEEEeeCCCcchhhhccC
Confidence                     678889999999999999999999999999  99999999999999987543

>d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), I [TaxId: 4076]

Probab=100.00  E-value=3.5e-41  Score=279.23  Aligned_cols=188  Identities=25%  Similarity=0.284  Sum_probs=169.5

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcC-CC
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQH-HQ   79 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~-g~   79 (251)
                      |++|||||++|||+++|++|+++|++|++++|++++++++.+++.+.  +..+.++.+|+++.++++++++++.+++ +.
T Consensus         7 K~alITGas~GIG~aia~~la~~G~~V~i~~r~~~~l~~~~~~~~~~--~~~~~~~~~D~s~~~~~~~~~~~~~~~~~g~   84 (258)
T d1ae1a_           7 TTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREK--GLNVEGSVCDLLSRTERDKLMQTVAHVFDGK   84 (258)
T ss_dssp             CEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT--TCCEEEEECCTTCHHHHHHHHHHHHHHTTSC
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc--CCCceEEEeecCCHHHHHHHHHHHHHHhCCC
Confidence            78999999999999999999999999999999999999999888765  5678899999999999999999999988 58


Q ss_pred             eeEEEEcCCCCC--CCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccccC
Q 025509           80 LNILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKI  157 (251)
Q Consensus        80 id~lv~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~  157 (251)
                      +|+||||||...  ++.+++.++|++++++|+.+++.++++++|+|.++     ..|+||++||..+..           
T Consensus        85 idilinnag~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~~-----~~g~ii~isS~~~~~-----------  148 (258)
T d1ae1a_          85 LNILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAYHLSQIAYPLLKAS-----QNGNVIFLSSIAGFS-----------  148 (258)
T ss_dssp             CCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----TSEEEEEECCGGGTS-----------
T ss_pred             cEEEeccccccccCccccCCHHHHhhhhhhccccccccccccccccccc-----ccccccccccccccc-----------
Confidence            999999999764  47788999999999999999999999999999987     689999999998876           


Q ss_pred             CCCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCC
Q 025509          158 NDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRHN  212 (251)
Q Consensus       158 ~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~~  212 (251)
                          +.+.+.+|+++|+|+++|++.||+|++++|  |+||+|+||+++|+|.+..
T Consensus       149 ----~~~~~~~Y~~sK~al~~lt~~lA~el~~~g--IrvN~I~PG~i~T~~~~~~  197 (258)
T d1ae1a_         149 ----ALPSVSLYSASKGAINQMTKSLACEWAKDN--IRVNSVAPGVILTPLVETA  197 (258)
T ss_dssp             ----CCTTCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECSBC-------
T ss_pred             ----ccccchhHHHHHHHHHHHHHHHHHhcCcCc--EEEEEEeeCcccCcchhhh
Confidence                778899999999999999999999999999  9999999999999997654

>d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein F25D1.5
species: Caenorhabditis elegans [TaxId: 6239]

Probab=100.00  E-value=9.3e-42  Score=285.19  Aligned_cols=190  Identities=24%  Similarity=0.279  Sum_probs=171.3

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhC-CCCceEEEEecCCCHHHHHHHHHHHHhcCCC
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEI-PSAKVDAMELDLSSLASVRNFASEYNIQHHQ   79 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~-~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~   79 (251)
                      |++|||||++|||+++|++|+++|++|++++|++++++++.+++.+.. ++.++.++++|++++++++++++++.+++|+
T Consensus         5 K~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~   84 (274)
T d1xhla_           5 KSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDIINTTLAKFGK   84 (274)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCCCcceEEEEeeCCCHHHHHHHHHHHHHHcCC
Confidence            789999999999999999999999999999999999999999997753 2457899999999999999999999999999


Q ss_pred             eeEEEEcCCCCC--C--CCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccc
Q 025509           80 LNILINNAGIMG--T--PFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFD  155 (251)
Q Consensus        80 id~lv~~ag~~~--~--~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~  155 (251)
                      +|++|||||...  +  ..+.+.|+|++.+++|+.+++.++|+++|+|+++     +.++|+++||.++..         
T Consensus        85 iDilVnnAG~~~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~-----~~g~ii~~ss~~~~~---------  150 (274)
T d1xhla_          85 IDILVNNAGANLADGTANTDQPVELYQKTFKLNFQAVIEMTQKTKEHLIKT-----KGEIVNVSSIVAGPQ---------  150 (274)
T ss_dssp             CCEEEECCCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT-----TCEEEEECCGGGSSS---------
T ss_pred             ceEEEeecccccccccccccCCHHHHHHHHhhccccccccccccccccccc-----ccccccchhhhhccc---------
Confidence            999999999642  2  2345788999999999999999999999999885     567888888876655         


Q ss_pred             cCCCCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCC
Q 025509          156 KINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRHN  212 (251)
Q Consensus       156 ~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~~  212 (251)
                            +.+++++|+++|+|+.+|+++||.|++++|  |+||+|+||+|+||+....
T Consensus       151 ------~~~~~~~Y~asKaal~~ltk~lA~ela~~g--IrVN~I~PG~i~T~~~~~~  199 (274)
T d1xhla_         151 ------AHSGYPYYACAKAALDQYTRCTAIDLIQHG--VRVNSVSPGAVATGFMGAM  199 (274)
T ss_dssp             ------CCTTSHHHHHHHHHHHHHHHHHHHHHGGGT--CEEEEEEECCBCSSHHHHT
T ss_pred             ------cCCCCceehhhhhHHHHHHHHHHHHHhHhC--CceeeeccCCCcCchhhhh
Confidence                  677888999999999999999999999999  9999999999999987654

>d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Peroxisomal trans 2-enoyl CoA reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=6e-41  Score=283.02  Aligned_cols=189  Identities=22%  Similarity=0.295  Sum_probs=171.6

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCC---CCceEEEEecCCCHHHHHHHHHHHHhcC
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIP---SAKVDAMELDLSSLASVRNFASEYNIQH   77 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~---~~~v~~~~~D~~~~~~i~~~~~~~~~~~   77 (251)
                      |++|||||++|||+++|++|+++|++|++++|+.+++++..+++.+..+   +.++.++++|++++++++++++++.+++
T Consensus        13 KvalITGas~GIG~aia~~la~~Ga~Vvi~~r~~~~l~~~~~el~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~~~~~   92 (297)
T d1yxma1          13 QVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLVKSTLDTF   92 (297)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhhccccCceEEEEeccCCCHHHHHHHHHHHHHHh
Confidence            7899999999999999999999999999999999999999999987543   4579999999999999999999999999


Q ss_pred             CCeeEEEEcCCCCC--CCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccc
Q 025509           78 HQLNILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFD  155 (251)
Q Consensus        78 g~id~lv~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~  155 (251)
                      |++|+||||||...  ++.+.+.++|++++++|+.+++.++++++|+|.++     +.++||++||.. ..         
T Consensus        93 G~iDiLVnnAg~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~~m~~~-----~~g~Ii~~ss~~-~~---------  157 (297)
T d1yxma1          93 GKINFLVNNGGGQFLSPAEHISSKGWHAVLETNLTGTFYMCKAVYSSWMKE-----HGGSIVNIIVPT-KA---------  157 (297)
T ss_dssp             SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHH-----HCEEEEEECCCC-TT---------
T ss_pred             CCeEEEEeeccccccCchhhhhhhhhhhhhcccccchhhHHHHHHHhhccc-----cccccccccccc-cc---------
Confidence            99999999999753  46788999999999999999999999999999887     478899887643 22         


Q ss_pred             cCCCCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCC
Q 025509          156 KINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRHN  212 (251)
Q Consensus       156 ~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~~  212 (251)
                            +.+....|+++|+|+.+|+++||.|++++|  |+||+|+||+|+|++....
T Consensus       158 ------~~~~~~~Y~asKaal~~ltk~lA~el~~~g--IrVN~I~PG~i~T~~~~~~  206 (297)
T d1yxma1         158 ------GFPLAVHSGAARAGVYNLTKSLALEWACSG--IRINCVAPGVIYSQTAVEN  206 (297)
T ss_dssp             ------CCTTCHHHHHHHHHHHHHHHHHHHHTGGGT--EEEEEEEECSBCCTGGGTT
T ss_pred             ------cccccccchhHHHHHHHHHHHHHHHhcccC--ceEEEeeeCcCcCcchhhh
Confidence                  567788999999999999999999999999  9999999999999997643

>d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Mannitol dehydrogenase
species: Mushroom (Agaricus bisporus) [TaxId: 5341]

Probab=100.00  E-value=4.7e-41  Score=278.95  Aligned_cols=198  Identities=24%  Similarity=0.309  Sum_probs=173.4

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      |++|||||++|||+++|++|+++|++|++++|+.+++.+..+++.+.+ +.++.++++|++++++++++++++.+++|++
T Consensus        10 K~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~~~~~~-g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i   88 (260)
T d1h5qa_          10 KTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEF-GVKTKAYQCDVSNTDIVTKTIQQIDADLGPI   88 (260)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCTTHHHHHHHHHHHH-TCCEEEEECCTTCHHHHHHHHHHHHHHSCSE
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHh-CCceEEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence            689999999999999999999999999999999999999888887665 5679999999999999999999999999999


Q ss_pred             eEEEEcCCCCC--CCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccccCC
Q 025509           81 NILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKIN  158 (251)
Q Consensus        81 d~lv~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~  158 (251)
                      |+||||||+..  ++.+.+.++|++.+++|+.+++.++++++|+|.++    +..++|++++|..........       
T Consensus        89 DilVnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~----~~~g~i~~~~s~~~~~~~~~~-------  157 (260)
T d1h5qa_          89 SGLIANAGVSVVKPATELTHEDFAFVYDVNVFGVFNTCRAVAKLWLQK----QQKGSIVVTSSMSSQIINQSS-------  157 (260)
T ss_dssp             EEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH----TCCEEEEEECCGGGTSCCEEE-------
T ss_pred             cEecccccccccCCHHHhccccccccccccccchhhhhhhhccccccc----ccceEEEEeeccccccccccc-------
Confidence            99999999764  46788999999999999999999999999999765    256788888886654321110       


Q ss_pred             CCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCCc
Q 025509          159 DPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRHNS  213 (251)
Q Consensus       159 ~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~~~  213 (251)
                       ..+.++..+|+++|+|+.+|+++||.|++++|  |+||+|+||+++|++.....
T Consensus       158 -~~~~~~~~~Y~asKaal~~lt~~lA~el~~~g--IrvN~I~PG~i~T~~~~~~~  209 (260)
T d1h5qa_         158 -LNGSLTQVFYNSSKAACSNLVKGLAAEWASAG--IRVNALSPGYVNTDQTAHMD  209 (260)
T ss_dssp             -TTEECSCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECSBCCGGGGGSC
T ss_pred             -cccCccccchhhhhhhHHHHHHHHHHHhchhC--eEEeecCCCcccCcchhccC
Confidence             11345678999999999999999999999999  99999999999999987653

>d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative dehydrogenase ARPG836 (MGC4172)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=8.8e-41  Score=276.71  Aligned_cols=194  Identities=25%  Similarity=0.284  Sum_probs=174.8

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      |++|||||++|||+++|+.|+++|++|++++|++++++++.+++++..++.++.+++||++++++++++++++.+++|++
T Consensus        11 Kv~lITGas~GIG~aiA~~la~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~v~~~~~~~g~i   90 (257)
T d1xg5a_          11 RLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAIRSQHSGV   90 (257)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHHHHHHHCCC
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEEEccCCCHHHHHHHHHHHHHhcCCC
Confidence            78999999999999999999999999999999999999999999988767789999999999999999999999999999


Q ss_pred             eEEEEcCCCCC--CCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccccCC
Q 025509           81 NILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKIN  158 (251)
Q Consensus        81 d~lv~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~  158 (251)
                      |+||||||...  ++.+.+.++|++.+++|+.+++.++++++|.|+++..   .+|+||++||.++...           
T Consensus        91 D~lVnnAg~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~~~~~~~---~~g~Ii~isS~~~~~~-----------  156 (257)
T d1xg5a_          91 DICINNAGLARPDTLLSGSTSGWKDMFNVNVLALSICTREAYQSMKERNV---DDGHIININSMSGHRV-----------  156 (257)
T ss_dssp             SEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTC---CSCEEEEECCGGGTSC-----------
T ss_pred             CEEEecccccCCCccccccHHHHHhhhhhhhhHHHHHHHHHHHHHHHhcc---CCCceEEEechHhcCC-----------
Confidence            99999999753  4778899999999999999999999999999987632   3689999999887541           


Q ss_pred             CCCCCCcccccchhHHHHHHHHHHHHHHh--ccCCCcEEEEEeeCCcccCCcccCC
Q 025509          159 DPSGYNGFRAYSQSKLANILHANELARRL--KEDGVDITANSVHPGAIATNIIRHN  212 (251)
Q Consensus       159 ~~~~~~~~~~Y~~sK~a~~~~~~~la~e~--~~~g~~i~v~~v~Pg~v~t~~~~~~  212 (251)
                        .|.+....|+++|+|+.+|+++|+.|+  ++.|  |+||+|+||+++|++....
T Consensus       157 --~p~~~~~~Y~~sKaal~~ltr~la~el~~~~~~--I~vn~i~PG~i~t~~~~~~  208 (257)
T d1xg5a_         157 --LPLSVTHFYSATKYAVTALTEGLRQELREAQTH--IRATCISPGVVETQFAFKL  208 (257)
T ss_dssp             --CSCGGGHHHHHHHHHHHHHHHHHHHHHHHTTCC--CEEEEEEESCBCSSHHHHH
T ss_pred             --CCCcccHHHHHHHHHHHhCHHHHHHHHHhCCCC--EEEEEEeCCCCCChhhhhc
Confidence              145566789999999999999999998  5566  9999999999999987643

>d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=9.7e-41  Score=274.07  Aligned_cols=208  Identities=22%  Similarity=0.303  Sum_probs=172.6

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      |++|||||++|||+++|++|+++|++|++++|++++++++.+++      ..+.++.+|+++++++++++    +++|++
T Consensus         6 K~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~------~~~~~~~~Dv~~~~~v~~~~----~~~g~i   75 (242)
T d1cyda_           6 LRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKEC------PGIEPVCVDLGDWDATEKAL----GGIGPV   75 (242)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHS------TTCEEEECCTTCHHHHHHHH----TTCCCC
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhc------CCCeEEEEeCCCHHHHHHHH----HHcCCC
Confidence            78999999999999999999999999999999988877765543      35788999999999987665    467999


Q ss_pred             eEEEEcCCCCC--CCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccccCC
Q 025509           81 NILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKIN  158 (251)
Q Consensus        81 d~lv~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~  158 (251)
                      |+||||||+..  ++.++++++|++.+++|+.+++.++|++.|+|.++    +..|+||+++|.++..            
T Consensus        76 DilVnnAg~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~----~~~g~ii~isS~~~~~------------  139 (242)
T d1cyda_          76 DLLVNNAALVIMQPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINR----GVPGSIVNVSSMVAHV------------  139 (242)
T ss_dssp             SEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH----TCCEEEEEECCGGGTS------------
T ss_pred             eEEEECCccccchhHHHHHHHHHHHHHHHHhccchHHHHHhchhhhhh----cccCcccccchhhccc------------
Confidence            99999999754  46788999999999999999999999999997765    2468999999988776            


Q ss_pred             CCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCCcch-hhhhhhhhhhhhHhhhccccCh
Q 025509          159 DPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRHNSLF-RSMNTILHALPGIAGKCLLKNV  237 (251)
Q Consensus       159 ~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~  237 (251)
                         +.++..+|+++|+|+.+|+++||.|++++|  ||||+|+||+++|++.+..... .....+....|    -..+-++
T Consensus       140 ---~~~~~~~Y~asKaal~~lt~~lA~e~~~~g--IrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~p----l~R~~~p  210 (242)
T d1cyda_         140 ---TFPNLITYSSTKGAMTMLTKAMAMELGPHK--IRVNSVNPTVVLTDMGKKVSADPEFARKLKERHP----LRKFAEV  210 (242)
T ss_dssp             ---CCTTBHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECCBTTHHHHHHTCCHHHHHHHHHHST----TSSCBCH
T ss_pred             ---cCCccccccchHHHHHHHHHHHHHHhCccC--eecccCCCCCccCHHHHhhcCCHHHHHHHHhcCC----CCCCcCH
Confidence               778889999999999999999999999999  9999999999999997643321 22222222222    2345567


Q ss_pred             HHHHHH
Q 025509          238 QQVILN  243 (251)
Q Consensus       238 ~~~~~~  243 (251)
                      ++.+..
T Consensus       211 eeva~~  216 (242)
T d1cyda_         211 EDVVNS  216 (242)
T ss_dssp             HHHHHH
T ss_pred             HHHHHH
Confidence            777764

>d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.5e-40  Score=273.38  Aligned_cols=208  Identities=21%  Similarity=0.270  Sum_probs=173.2

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      |++|||||++|||+++|++|+++|++|++++|++++++++.+++      ..+..+.+|++|++++++++    +++|++
T Consensus         8 K~~lITGas~GIG~aia~~la~~G~~V~~~~r~~~~l~~~~~~~------~~~~~~~~Dv~d~~~v~~~~----~~~g~i   77 (244)
T d1pr9a_           8 RRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVREC------PGIEPVCVDLGDWEATERAL----GSVGPV   77 (244)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHS------TTCEEEECCTTCHHHHHHHH----TTCCCC
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHhc------CCCeEEEEeCCCHHHHHHHH----HHhCCc
Confidence            78999999999999999999999999999999988887766543      34788999999999987765    467899


Q ss_pred             eEEEEcCCCCC--CCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccccCC
Q 025509           81 NILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKIN  158 (251)
Q Consensus        81 d~lv~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~  158 (251)
                      |+||||||+..  ++.+.+.++|++.+++|+.+++.++++++|++.++    +..|+||++||.++..            
T Consensus        78 DilVnnAg~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~----~~~g~Ii~isS~~~~~------------  141 (244)
T d1pr9a_          78 DLLVNNAAVALLQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIAR----GVPGAIVNVSSQCSQR------------  141 (244)
T ss_dssp             CEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH----TCCEEEEEECCGGGTS------------
T ss_pred             eEEEeccccccccchhhhhHHHHHHHHHHhhhhhhHHHHHhhhHHHHh----CCcceEeecccccccc------------
Confidence            99999999764  46788999999999999999999999999987664    2479999999998876            


Q ss_pred             CCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCCcchh-hhhhhhhhhhhHhhhccccCh
Q 025509          159 DPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRHNSLFR-SMNTILHALPGIAGKCLLKNV  237 (251)
Q Consensus       159 ~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~  237 (251)
                         +.+...+|++||+|+.+|+++||.|++++|  ||||+|+||+|+|++.+...... ....+....|.    ..+-++
T Consensus       142 ---~~~~~~~Y~asKaal~~lt~~lA~el~~~g--IrvN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~pl----~R~~~p  212 (244)
T d1pr9a_         142 ---AVTNHSVYCSTKGALDMLTKVMALELGPHK--IRVNAVNPTVVMTSMGQATWSDPHKAKTMLNRIPL----GKFAEV  212 (244)
T ss_dssp             ---CCTTBHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECCBCSHHHHTTSCSHHHHHHHHTTCTT----CSCBCH
T ss_pred             ---cccchhhhhhhHHHHHHHHHHHHHHhCCCc--EEEEEEeeCcCcChHHhhhccChHHHHHHHhcCCC----CCCcCH
Confidence               778889999999999999999999999999  99999999999999987543222 22222333332    345567


Q ss_pred             HHHHHH
Q 025509          238 QQVILN  243 (251)
Q Consensus       238 ~~~~~~  243 (251)
                      ++.+..
T Consensus       213 eevA~~  218 (244)
T d1pr9a_         213 EHVVNA  218 (244)
T ss_dssp             HHHHHH
T ss_pred             HHHHHH
Confidence            777654

>d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Drosophila alcohol dehydrogenase
species: Fly (Drosophila lebanonensis) [TaxId: 7225]

Probab=100.00  E-value=8.8e-41  Score=276.18  Aligned_cols=214  Identities=24%  Similarity=0.293  Sum_probs=176.4

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCC-CHHHHHHHHHHHHhcCCC
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLS-SLASVRNFASEYNIQHHQ   79 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~-~~~~i~~~~~~~~~~~g~   79 (251)
                      |+||||||++|||+++|++|+++|++|++++|+.++.+.+ ++++...++..+.++.+|++ +.++++++++++.+++|+
T Consensus         6 K~vlITGgs~GIG~~~A~~la~~G~~vii~~r~~~~~~~~-~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~g~   84 (254)
T d1sbya1           6 KNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTAL-AELKAINPKVNITFHTYDVTVPVAESKKLLKKIFDQLKT   84 (254)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTCCSEEEEEESSCCHHHH-HHHHHHCTTSEEEEEECCTTSCHHHHHHHHHHHHHHHSC
T ss_pred             CEEEEecCCCHHHHHHHHHHHHCCCEEEEEECCcccHHHH-HHHHhhCCCCCEEEEEeecCCCHHHHHHHHHHHHHHcCC
Confidence            7899999999999999999999999999998887775544 45556666778999999998 677899999999999999


Q ss_pred             eeEEEEcCCCCCCCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccccCCC
Q 025509           80 LNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKIND  159 (251)
Q Consensus        80 id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~  159 (251)
                      +|+||||||.      .++++|++++++|+.|++.++++++|+|.++..  ++.|+||++||..+..             
T Consensus        85 iDilvnnAG~------~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~--~~~g~Ii~isS~~~~~-------------  143 (254)
T d1sbya1          85 VDILINGAGI------LDDHQIERTIAINFTGLVNTTTAILDFWDKRKG--GPGGIIANICSVTGFN-------------  143 (254)
T ss_dssp             CCEEEECCCC------CCTTCHHHHHHHHTHHHHHHHHHHHHHHCGGGT--CCCEEEEEECCGGGTS-------------
T ss_pred             CCEEEeCCCC------CCHHHHHHHHHHHhHHHHHHHHHHHHHhhhccc--CCCceEEEEechhhcc-------------
Confidence            9999999995      346789999999999999999999999977532  2469999999998876             


Q ss_pred             CCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCCcchhhhhhhhhhhhhHhhhccccChHH
Q 025509          160 PSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRHNSLFRSMNTILHALPGIAGKCLLKNVQQ  239 (251)
Q Consensus       160 ~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (251)
                        +.+++.+|++||+|+.+|+++|+.|+.+.|  |+||+|+||+|+|||.+.........   .............++++
T Consensus       144 --~~~~~~~Y~asKaal~~~t~~la~el~~~g--IrVn~I~PG~v~T~~~~~~~~~~~~~---~~~~~~~~~~~~~~~e~  216 (254)
T d1sbya1         144 --AIHQVPVYSASKAAVVSFTNSLAKLAPITG--VTAYSINPGITRTPLVHTFNSWLDVE---PRVAELLLSHPTQTSEQ  216 (254)
T ss_dssp             --CCTTSHHHHHHHHHHHHHHHHHHHHHHHHS--EEEEEEEECSEESHHHHSCCCGGGSC---TTHHHHHTTSCCEEHHH
T ss_pred             --CCCCCHHHHHHHHHHHHHHHHHHhhccccC--eEEEEEEeCCCcCccccccccchhHH---HHHHhccccCCCCCHHH
Confidence              788899999999999999999999999999  99999999999999877543322211   11222222233445666


Q ss_pred             HHHH
Q 025509          240 VILN  243 (251)
Q Consensus       240 ~~~~  243 (251)
                      .+..
T Consensus       217 va~~  220 (254)
T d1sbya1         217 CGQN  220 (254)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            6654

>d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sepiapterin reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=1e-40  Score=276.79  Aligned_cols=222  Identities=23%  Similarity=0.249  Sum_probs=182.0

Q ss_pred             CEEEEECCCChhHHHHHHHHHH---cCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHh--
Q 025509            1 MDIVITGATSGIGTETARVLAL---RGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNI--   75 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~---~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~--   75 (251)
                      |++||||||+|||+++|++|++   +|++|++++|++++++++.+++....++.++.++++|++++++++++++.+.+  
T Consensus         7 KvalITGas~GIG~aiA~~lA~~~~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~l~~~~~~~~   86 (259)
T d1oaaa_           7 AVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDLKVVLAAADLGTEAGVQRLLSAVRELP   86 (259)
T ss_dssp             EEEEESSCSSHHHHHHHHHHHTTBCTTCEEEEEESCHHHHHHHHHHHHHHCTTSEEEEEECCTTSHHHHHHHHHHHHHSC
T ss_pred             CEEEEeCCCCHHHHHHHHHHHhcccCCCEEEEEECCHHHHHHHHHHHHhhcCCceEEEEEccCCCHHHHHHHHHHHHHhh
Confidence            6899999999999999999986   79999999999999999999999888788999999999999999999998876  


Q ss_pred             --cCCCeeEEEEcCCCCCC-----CCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccc
Q 025509           76 --QHHQLNILINNAGIMGT-----PFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAY  148 (251)
Q Consensus        76 --~~g~id~lv~~ag~~~~-----~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~  148 (251)
                        .++.+|++|||||...+     +.+.++++|++++++|+.+++.++++++|+|++++   +..|+||++||.++..  
T Consensus        87 ~~~~~~~~~lvnnag~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~m~~~~---~~~g~Iv~isS~~~~~--  161 (259)
T d1oaaa_          87 RPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWALNLTSMLCLTSGTLNAFQDSP---GLSKTVVNISSLCALQ--  161 (259)
T ss_dssp             CCTTCCEEEEEECCCCCCCCSSCGGGCCCHHHHHHHHHHHTHHHHHHHHHHHHTSCCCT---TCEEEEEEECCGGGTS--
T ss_pred             hhccCceEEEEecccccccCCCCccccCCHHHHHHHHHHhhhhhHHHHHHHHHHHHhcC---CCcccccccccccccC--
Confidence              34689999999997532     45678899999999999999999999999998752   1258999999998876  


Q ss_pred             cCCcccccCCCCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCCcchhhhhhhhhhhhhH
Q 025509          149 HEGIRFDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRHNSLFRSMNTILHALPGI  228 (251)
Q Consensus       149 ~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~  228 (251)
                                   +.++++.|++||+|+.+|+++|+.|  +.|  |+||+|+||+|.|+|.+..................
T Consensus       162 -------------~~~~~~~Y~asKaal~~lt~~la~e--~~g--IrVn~v~PG~i~T~~~~~~~~~~~~~~~~~~~~~~  224 (259)
T d1oaaa_         162 -------------PYKGWGLYCAGKAARDMLYQVLAAE--EPS--VRVLSYAPGPLDNDMQQLARETSKDPELRSKLQKL  224 (259)
T ss_dssp             -------------CCTTCHHHHHHHHHHHHHHHHHHHH--CTT--EEEEEEECCSBSSHHHHHHHHHCSCHHHHHHHHHH
T ss_pred             -------------CCccchHHHHHHHHHHHHHHHHHhC--CCC--CEEEEEEcCCCCCHHHHHhhhcCCCHHHHHHHHhc
Confidence                         7888999999999999999999998  457  99999999999999876322111111111122222


Q ss_pred             hhhccccChHHHHHHH
Q 025509          229 AGKCLLKNVQQVILNF  244 (251)
Q Consensus       229 ~~~~~~~~~~~~~~~~  244 (251)
                      .....+.+|++.+..+
T Consensus       225 ~~~~r~~~p~evA~~i  240 (259)
T d1oaaa_         225 KSDGALVDCGTSAQKL  240 (259)
T ss_dssp             HHTTCSBCHHHHHHHH
T ss_pred             CCCCCCCCHHHHHHHH
Confidence            3334556777777653

>d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Halohydrin dehalogenase HheC
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=100.00  E-value=5e-41  Score=277.53  Aligned_cols=182  Identities=16%  Similarity=0.138  Sum_probs=163.7

Q ss_pred             EEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCee
Q 025509            2 DIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQLN   81 (251)
Q Consensus         2 ~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~id   81 (251)
                      ++|||||++|||+++|++|+++|++|++++|+.+.++++.... ..       +.++|+++.++++++++++.+++|++|
T Consensus         2 TAlVTGas~GiG~aiA~~la~~Ga~V~i~~r~~~~~~~~~~~~-~~-------~~~~dv~~~~~~~~~~~~~~~~~G~iD   73 (252)
T d1zmta1           2 TAIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDELEAFA-ET-------YPQLKPMSEQEPAELIEAVTSAYGQVD   73 (252)
T ss_dssp             EEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHHHH-HH-------CTTSEECCCCSHHHHHHHHHHHHSCCC
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHhhh-Cc-------EEEeccCCHHHHHHHHHHHHHHcCCCC
Confidence            7999999999999999999999999999999988877765432 22       235899999999999999999999999


Q ss_pred             EEEEcCCCC---CCCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccccCC
Q 025509           82 ILINNAGIM---GTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKIN  158 (251)
Q Consensus        82 ~lv~~ag~~---~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~  158 (251)
                      +||||||+.   .++.+.+.++|++.+++|+.+++.++|+++|+|+++     +.|+||++||.++..            
T Consensus        74 iLVnNAg~~~~~~~~~~~~~e~~~~~~~vnl~~~~~~~~~~~~~m~~~-----~~G~IV~isS~~~~~------------  136 (252)
T d1zmta1          74 VLVSNDIFAPEFQPIDKYAVEDYRGAVEALQIRPFALVNAVASQMKKR-----KSGHIIFITSATPFG------------  136 (252)
T ss_dssp             EEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----TCCEEEEECCSTTTS------------
T ss_pred             EEEECCcCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhccc-----ccceeeccccccccc------------
Confidence            999999964   246678999999999999999999999999999987     579999999988776            


Q ss_pred             CCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCCc
Q 025509          159 DPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRHNS  213 (251)
Q Consensus       159 ~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~~~  213 (251)
                         +.+...+|+++|+|+.+|+++||+|++++|  |+||+|+||+++|++.....
T Consensus       137 ---~~~~~~~Y~asKaal~~lt~~lA~ela~~g--IrVN~I~PG~i~T~~~~~~~  186 (252)
T d1zmta1         137 ---PWKELSTYTSARAGACTLANALSKELGEYN--IPVFAIGPNYLHSEDSPYFY  186 (252)
T ss_dssp             ---CCTTCHHHHHHHHHHHHHHHHHHHHHGGGT--CCEEEEEESSBCCBTCCSSC
T ss_pred             ---ccccccccccccccHHHHHHHHHHHhcccC--cEEEEEecCCCcCcchhhhh
Confidence               778889999999999999999999999999  99999999999999987543

>d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase
species: Pseudomonas sp., lb400 [TaxId: 306]

Probab=100.00  E-value=3e-40  Score=276.27  Aligned_cols=183  Identities=22%  Similarity=0.235  Sum_probs=163.7

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      |++|||||++|||+++|++|+++|++|++++|++++++++.+++     +.++.++.+|+++.++++++++++.+++|++
T Consensus         6 K~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~~-----~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~i   80 (276)
T d1bdba_           6 EAVLITGGASGLGRALVDRFVAEGAKVAVLDKSAERLAELETDH-----GDNVLGIVGDVRSLEDQKQAASRCVARFGKI   80 (276)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH-----GGGEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHc-----CCCeeEEecccccHHHHHHHHHHHHHHhCCc
Confidence            68999999999999999999999999999999998888776665     5679999999999999999999999999999


Q ss_pred             eEEEEcCCCCCC-------CCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcc
Q 025509           81 NILINNAGIMGT-------PFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIR  153 (251)
Q Consensus        81 d~lv~~ag~~~~-------~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~  153 (251)
                      |++|||||+...       +.+.+.++|++++++|+.+++.++|+++|+|+++      +|++|+++|..+..       
T Consensus        81 dilvnnAG~~~~~~~~~~~~~e~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~------~g~iI~i~S~~~~~-------  147 (276)
T d1bdba_          81 DTLIPNAGIWDYSTALVDLPEESLDAAFDEVFHINVKGYIHAVKACLPALVAS------RGNVIFTISNAGFY-------  147 (276)
T ss_dssp             CEEECCCCCCCTTCCGGGSCTTTHHHHHHHHHHHHTHHHHHHHHHHHHHHHHH------TCEEEEECCGGGTS-------
T ss_pred             ccccccccccCCCCccccccccchhhhhhHHHHHhhHHHHHHHHHHHHHHHhc------CCCceeeeechhcc-------
Confidence            999999997532       1233345699999999999999999999999875      58999999988776       


Q ss_pred             cccCCCCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCC
Q 025509          154 FDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRHN  212 (251)
Q Consensus       154 ~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~~  212 (251)
                              +.++.++|+++|+|+.+|+++||.|+++ +  ||||+|+||+|+|+|..+.
T Consensus       148 --------~~~~~~~Y~asKaal~~ltr~lA~ela~-~--IrVN~I~PG~i~T~~~~~~  195 (276)
T d1bdba_         148 --------PNGGGPLYTAAKHAIVGLVRELAFELAP-Y--VRVNGVGSGGINSDLRGPS  195 (276)
T ss_dssp             --------TTSSCHHHHHHHHHHHHHHHHHHHHHTT-T--CEEEEEEECCCCSCCCCCG
T ss_pred             --------CCCCCchHHHHHHHHHHHHHHHHHHhhc-c--eEEcccCCCCEecCcCCcc
Confidence                    7788899999999999999999999986 5  9999999999999987643

>d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus, TTHB020 [TaxId: 274]

Probab=100.00  E-value=2.8e-40  Score=271.17  Aligned_cols=209  Identities=22%  Similarity=0.247  Sum_probs=171.6

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      |++|||||++|||+++|+.|+++|++|++++|+.+++++..+++     +.++.++++|++++++++++++++.+++|++
T Consensus         6 K~alItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~Dls~~~~i~~~~~~i~~~~g~i   80 (241)
T d2a4ka1           6 KTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAAL-----EAEAIAVVADVSDPKAVEAVFAEALEEFGRL   80 (241)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTC-----CSSEEEEECCTTSHHHHHHHHHHHHHHHSCC
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHc-----CCceEEEEecCCCHHHHHHHHHHHHHHhCCc
Confidence            78999999999999999999999999999999988776655543     5678999999999999999999999999999


Q ss_pred             eEEEEcCCCCC--CCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccccCC
Q 025509           81 NILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKIN  158 (251)
Q Consensus        81 d~lv~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~  158 (251)
                      |++|||||...  ++.+.+.++|++++++|+.+++.++|+++|++.+       .+.++++||.+..             
T Consensus        81 DiLinnAg~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~k~~~~~~~~-------~~~i~~~ss~a~~-------------  140 (241)
T d2a4ka1          81 HGVAHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVLEE-------GGSLVLTGSVAGL-------------  140 (241)
T ss_dssp             CEEEEGGGGTTTTC----CHHHHHHHHHHHHHHHHHHHHHHHHHCCT-------TCEEEEECCCTTC-------------
T ss_pred             cEeccccccccccchhhhhcccccccccccccccccccccccccccc-------ccceeeccccccc-------------
Confidence            99999999753  4678899999999999999999999999998765       3566666665433             


Q ss_pred             CCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCCcchhhhhhhhhhhhhHhhhccccChH
Q 025509          159 DPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRHNSLFRSMNTILHALPGIAGKCLLKNVQ  238 (251)
Q Consensus       159 ~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (251)
                         +.+++..|+++|+|+++|+++||+|++++|  |+||+|+||+++|++....+. ..........|    -..+-+++
T Consensus       141 ---~~~~~~~Y~~sK~al~~lt~~lA~el~~~g--IrvN~I~PG~v~T~~~~~~~~-~~~~~~~~~~p----~~r~~~p~  210 (241)
T d2a4ka1         141 ---GAFGLAHYAAGKLGVVGLARTLALELARKG--VRVNVLLPGLIQTPMTAGLPP-WAWEQEVGASP----LGRAGRPE  210 (241)
T ss_dssp             ---CHHHHHHHHHCSSHHHHHHHHHHHHHTTTT--CEEEEEEECSBCCGGGTTSCH-HHHHHHHHTST----TCSCBCHH
T ss_pred             ---cccCccccchhhHHHHHHHHHHHHHHhHhC--CEEeeeccCcCCCHHHHhhhH-hHHHHHHhCCC----CCCCcCHH
Confidence               456788999999999999999999999999  999999999999999875432 33333333333    24455778


Q ss_pred             HHHHHH
Q 025509          239 QVILNF  244 (251)
Q Consensus       239 ~~~~~~  244 (251)
                      +.+..+
T Consensus       211 dva~~v  216 (241)
T d2a4ka1         211 EVAQAA  216 (241)
T ss_dssp             HHHHHH
T ss_pred             HHHHHH
Confidence            777653

>d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase sniffer
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=100.00  E-value=1.9e-39  Score=267.51  Aligned_cols=196  Identities=25%  Similarity=0.351  Sum_probs=167.5

Q ss_pred             CEEEEECCCChhHHHHHHHHH---HcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHh--
Q 025509            1 MDIVITGATSGIGTETARVLA---LRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNI--   75 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~---~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~--   75 (251)
                      |+||||||++|||+++|+.|+   ++|++|++++|++++++++.+ +.+.  +.++.++++|++|+++++++++++.+  
T Consensus         3 KtilITGas~GIG~a~a~~l~~~a~~g~~V~~~~r~~~~~~~~~~-~~~~--~~~~~~~~~Dvs~~~~v~~~~~~i~~~~   79 (248)
T d1snya_           3 NSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELED-LAKN--HSNIHILEIDLRNFDAYDKLVADIEGVT   79 (248)
T ss_dssp             SEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCHHHHH-HHHH--CTTEEEEECCTTCGGGHHHHHHHHHHHH
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHH-HHhc--CCcEEEEEEEeccHHHHHHHHhhhHHHh
Confidence            789999999999999999996   479999999999998887754 3333  45799999999999999999998854  


Q ss_pred             cCCCeeEEEEcCCCCCC---CCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhcc------CCCCceEEEEcCccccc
Q 025509           76 QHHQLNILINNAGIMGT---PFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARK------SGGEGRIINVSSEGHRL  146 (251)
Q Consensus        76 ~~g~id~lv~~ag~~~~---~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~------~~~~g~iv~vsS~~~~~  146 (251)
                      +++++|+||||||+..+   ..+.+.++|++++++|+.|++.++++++|+|+++.+.      ....|++|+++|..+..
T Consensus        80 ~~~~iDiLvnNAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~p~l~~~~~~~~~~~~~~~~g~ii~i~S~~g~~  159 (248)
T d1snya_          80 KDQGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPIMLAKACLPLLKKAAKANESQPMGVGRAAIINMSSILGSI  159 (248)
T ss_dssp             GGGCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHTTTSCSSTTTCEEEEECCGGGCS
T ss_pred             hcCCcceEEeeccccccCcccccCCHHHHHHHHHhccccHHHHHHHHHHHHHHhhhcccccccccccccccccccccccc
Confidence            67899999999997532   4567889999999999999999999999999886431      12468999999987764


Q ss_pred             cccCCcccccCCCCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCCc
Q 025509          147 AYHEGIRFDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRHNS  213 (251)
Q Consensus       147 ~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~~~  213 (251)
                      .            ..+.+++.+|++||+|+.+|+++|+.|+.++|  |+||+|+||+|+|+|.....
T Consensus       160 ~------------~~~~~~~~~Y~aSKaal~~lt~~la~e~~~~g--I~vn~v~PG~v~T~m~~~~~  212 (248)
T d1snya_         160 Q------------GNTDGGMYAYRTSKSALNAATKSLSVDLYPQR--IMCVSLHPGWVKTDMGGSSA  212 (248)
T ss_dssp             T------------TCCSCCCHHHHHHHHHHHHHHHHHHHHHGGGT--CEEEEECCCSBCSTTTCTTC
T ss_pred             C------------CCCCCChHHHHHHHHHHHHHHHHHHHHhCCCC--eEEEEcCCCcccCCcccccC
Confidence            2            11445677999999999999999999999999  99999999999999987543

>d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,6,8-tetrahydroxynaphthalene reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=100.00  E-value=4e-40  Score=273.16  Aligned_cols=186  Identities=25%  Similarity=0.328  Sum_probs=164.9

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEec-CchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCC
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVR-DIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQ   79 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r-~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~   79 (251)
                      |+||||||++|||+++|++|+++|++|+++++ +++.++++.+++.+.  +.++.++++|++++++++++++++.+++|+
T Consensus         7 K~alITGas~GIG~aia~~la~~G~~Vvi~~~~~~~~~~~~~~~~~~~--g~~~~~~~~D~~~~~~v~~~~~~~~~~~g~   84 (259)
T d1ja9a_           7 KVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKL--GAQGVAIQADISKPSEVVALFDKAVSHFGG   84 (259)
T ss_dssp             CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT--TCCEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHcCCEEEEEcCCChHHHHHHHHHHHHc--CCCceEecCCCCCHHHHHHHHHHHHHHcCC
Confidence            78999999999999999999999999998764 555567777777665  567899999999999999999999999999


Q ss_pred             eeEEEEcCCCCC--CCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccccC
Q 025509           80 LNILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKI  157 (251)
Q Consensus        80 id~lv~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~  157 (251)
                      +|++|||||...  +..+.+.++|++.+++|+.+++.++++++|+|++       .+++++++|..+...          
T Consensus        85 idilinnag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~-------~g~~iii~s~~~~~~----------  147 (259)
T d1ja9a_          85 LDFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRR-------GGRIILTSSIAAVMT----------  147 (259)
T ss_dssp             EEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEEE-------EEEEEEECCGGGTCC----------
T ss_pred             CcEEEeccccccccccccchHHHHHHHHhhccceeeeehhhhhhhhhc-------CCccccccccccccc----------
Confidence            999999999764  3667889999999999999999999999999965       367888888665441          


Q ss_pred             CCCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccC
Q 025509          158 NDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  211 (251)
Q Consensus       158 ~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  211 (251)
                          +.+.+..|+++|+|+.+|+++||+|++++|  |+||+|+||+++|+|++.
T Consensus       148 ----~~~~~~~Y~asK~al~~l~r~lA~e~~~~g--IrvN~I~PG~i~T~~~~~  195 (259)
T d1ja9a_         148 ----GIPNHALYAGSKAAVEGFCRAFAVDCGAKG--VTVNCIAPGGVKTDMFDE  195 (259)
T ss_dssp             ----SCCSCHHHHHHHHHHHHHHHHHHHHHGGGT--CEEEEEEECCBSSHHHHH
T ss_pred             ----CCCCchhHHHHHHHHHHHHHHHHHHHhhcC--eEEeccCcCCccChhhhh
Confidence                677889999999999999999999999999  999999999999998754

>d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.6e-39  Score=272.97  Aligned_cols=188  Identities=24%  Similarity=0.300  Sum_probs=158.3

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEE---EecCchhHHHHHHHHHh-hCCCCceEEEEecCCCHHHHHHHHHHHHhc
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVM---GVRDIAAGKDVKETIVK-EIPSAKVDAMELDLSSLASVRNFASEYNIQ   76 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~---~~r~~~~~~~~~~~~~~-~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~   76 (251)
                      |+|||||||+|||+++|+.|+++|++|++   +.|+.+..+++.+...+ ...+.++.++.+|++|.++++++++++.+ 
T Consensus         3 kVvlITGassGIG~a~A~~la~~Ga~v~~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~-   81 (285)
T d1jtva_           3 TVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRDSKSVAAARERVTE-   81 (285)
T ss_dssp             EEEEESCCSSHHHHHHHHHHHTCTTCCEEEEEEESCGGGTHHHHHHHHHTTCCTTSEEEEECCTTCHHHHHHHHHTCTT-
T ss_pred             CEEEEccCCCHHHHHHHHHHHHCCCCeEEEEEecCChhhhHHHHHHHHHHhccCCceEEEeccccchHhhhhhhhhccc-
Confidence            57899999999999999999999987544   45555554444444433 22356899999999999999999988743 


Q ss_pred             CCCeeEEEEcCCCCC--CCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCccc
Q 025509           77 HHQLNILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRF  154 (251)
Q Consensus        77 ~g~id~lv~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~  154 (251)
                       |.+|+||||||...  ++.+.+.++|++.+++|+.|++.++++++|+|+++     +.|+||++||.++..        
T Consensus        82 -g~idilvnnag~~~~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~m~~~-----~~G~Iv~isS~~g~~--------  147 (285)
T d1jtva_          82 -GRVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRR-----GSGRVLVTGSVGGLM--------  147 (285)
T ss_dssp             -SCCSEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----TCEEEEEEEEGGGTS--------
T ss_pred             -cchhhhhhcccccccccccchhHhhhhhhhhcchhHHHHHHHHHHHHHHHc-----CCCceEEEechhhcC--------
Confidence             78999999999754  36778999999999999999999999999999987     579999999999887        


Q ss_pred             ccCCCCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCC
Q 025509          155 DKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRHN  212 (251)
Q Consensus       155 ~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~~  212 (251)
                             +.+++++|++||+|+.+|+++|+.|++++|  |+||+|+||+|+|++++..
T Consensus       148 -------~~~~~~~Y~asKaal~~l~~~la~El~~~g--IrVn~V~PG~v~T~~~~~~  196 (285)
T d1jtva_         148 -------GLPFNDVYCASKFALEGLCESLAVLLLPFG--VHLSLIECGPVHTAFMEKV  196 (285)
T ss_dssp             -------CCTTCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECCBCC------
T ss_pred             -------CCCCchHHHHHHHHHHHHHHHHHHHhhccC--cEEEEEecCCCCChHHHHh
Confidence                   788889999999999999999999999999  9999999999999998753

>d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=9e-40  Score=276.30  Aligned_cols=185  Identities=25%  Similarity=0.298  Sum_probs=164.7

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecC---------chhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHH
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRD---------IAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFAS   71 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~---------~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~   71 (251)
                      |++|||||++|||+++|++|+++|++|++.+|+         ...+++..+++..     ......+|+++.++++++++
T Consensus         8 KvalITGas~GIG~aiA~~la~~Ga~Vvi~d~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~d~~~~~~~~~~v~   82 (302)
T d1gz6a_           8 RVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRR-----RGGKAVANYDSVEAGEKLVK   82 (302)
T ss_dssp             CEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSCBCCSHHHHHHHHHHHH-----TTCEEEEECCCGGGHHHHHH
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCchhhhhhhhHHHHHHHHHHHhh-----cccccccccchHHHHHHHHH
Confidence            789999999999999999999999999998765         3445666665543     34556789999999999999


Q ss_pred             HHHhcCCCeeEEEEcCCCCC--CCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCcccccccc
Q 025509           72 EYNIQHHQLNILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYH  149 (251)
Q Consensus        72 ~~~~~~g~id~lv~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~  149 (251)
                      ++.+++|++|+||||||+..  ++.+++.++|++++++|+.|++.++|+++|+|+++     +.|+||++||.++..   
T Consensus        83 ~~~~~~G~iDiLVnNAGi~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~-----~~G~IV~isS~~~~~---  154 (302)
T d1gz6a_          83 TALDTFGRIDVVVNNAGILRDRSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQ-----NYGRIIMTASASGIY---  154 (302)
T ss_dssp             HHHHHTSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----TCEEEEEECCHHHHH---
T ss_pred             HHHHHcCCCCEEEECCccCCCCChhhCCHHHHhhhhceeehhhHHHHHHhHHHHHhC-----CCcEEEEeCChhhcC---
Confidence            99999999999999999864  47788999999999999999999999999999987     579999999999887   


Q ss_pred             CCcccccCCCCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCC
Q 025509          150 EGIRFDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRHN  212 (251)
Q Consensus       150 ~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~~  212 (251)
                                  +.++..+|++||+|+.+|+++|+.|++++|  |+||+|+||++.|++....
T Consensus       155 ------------~~~~~~~Y~asKaal~~lt~~la~E~~~~g--IrVN~I~PG~~~t~~~~~~  203 (302)
T d1gz6a_         155 ------------GNFGQANYSAAKLGLLGLANTLVIEGRKNN--IHCNTIAPNAGSRMTETVM  203 (302)
T ss_dssp             ------------CCTTCHHHHHHHHHHHHHHHHHHHHTGGGT--EEEEEEEEECCSTTTGGGS
T ss_pred             ------------CCCCcHHHHHHHHHHHHHHHHHHHHHhccC--CceeeeCCCCCCcchhhcC
Confidence                        788889999999999999999999999999  9999999999988775543

>d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 11-beta-hydroxysteroid dehydrogenase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.6e-39  Score=269.63  Aligned_cols=188  Identities=24%  Similarity=0.265  Sum_probs=172.7

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      |++||||||+|||+++|++|+++|++|++++|++++++++.+++.+.. +..+..+.+|+++.+++....+++...+|.+
T Consensus        15 K~alITGassGIG~aiA~~la~~G~~Vil~~r~~~~l~~~~~~~~~~~-~~~~~~~~~d~~~~~~~~~~~~~~~~~~g~~   93 (269)
T d1xu9a_          15 KKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELG-AASAHYIAGTMEDMTFAEQFVAQAGKLMGGL   93 (269)
T ss_dssp             CEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHT-CSEEEEEECCTTCHHHHHHHHHHHHHHHTSC
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHhhhh-cccchhhhhhhhhHHHHHHHHHHHHHHhCCc
Confidence            789999999999999999999999999999999999999998887665 5678899999999999999999999999999


Q ss_pred             eEEEEcCCCCC--CCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccccCC
Q 025509           81 NILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKIN  158 (251)
Q Consensus        81 d~lv~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~  158 (251)
                      |++++|||...  ++.+.+.++|++++++|+.+++.+++.++|+|+++      .|+||++||.++..            
T Consensus        94 ~~li~nag~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~lp~m~~~------~G~ii~isS~~~~~------------  155 (269)
T d1xu9a_          94 DMLILNHITNTSLNLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQS------NGSIVVVSSLAGKV------------  155 (269)
T ss_dssp             SEEEECCCCCCCCCCCCSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH------TCEEEEEEEGGGTS------------
T ss_pred             cccccccccccccccccCCHHHhhhheeeehhhHHHHHHHHHHHHHhc------CCcceEeccchhcC------------
Confidence            99999999754  36677899999999999999999999999999764      68999999998877            


Q ss_pred             CCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCccc
Q 025509          159 DPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIR  210 (251)
Q Consensus       159 ~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~  210 (251)
                         +.+++.+|++||+|+.+|+++|+.|++++|.+|+||+|+||+|+|+|.+
T Consensus       156 ---~~p~~~~Y~asKaal~~~~~~La~El~~~~~~I~V~~v~PG~v~T~~~~  204 (269)
T d1xu9a_         156 ---AYPMVAAYSASKFALDGFFSSIRKEYSVSRVNVSITLCVLGLIDTETAM  204 (269)
T ss_dssp             ---CCTTCHHHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEEEECCBCCHHHH
T ss_pred             ---CCCCchHHHHHHHHHHHHHHHHHHHhhhcCCCEEEEEEecCcCCCcHHH
Confidence               7889999999999999999999999987655699999999999999865

>d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=100.00  E-value=8.5e-39  Score=261.31  Aligned_cols=200  Identities=20%  Similarity=0.195  Sum_probs=164.0

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      |++|||||++|||+++|++|+++|++|++++|+++.+++           ....++.+|+++.      ++.+.+++|++
T Consensus         5 K~~lVTGas~GIG~aia~~l~~~Ga~V~~~~r~~~~l~~-----------~~~~~~~~Dv~~~------~~~~~~~~g~i   67 (234)
T d1o5ia_           5 KGVLVLAASRGIGRAVADVLSQEGAEVTICARNEELLKR-----------SGHRYVVCDLRKD------LDLLFEKVKEV   67 (234)
T ss_dssp             CEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHH-----------TCSEEEECCTTTC------HHHHHHHSCCC
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHh-----------cCCcEEEcchHHH------HHHHHHHhCCC
Confidence            789999999999999999999999999999998755432           1345678999863      34455677999


Q ss_pred             eEEEEcCCCCC--CCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccccCC
Q 025509           81 NILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKIN  158 (251)
Q Consensus        81 d~lv~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~  158 (251)
                      |+||||||...  ++.+++.++|++.+++|+.+++.++|+++|+|+++     +.|+||+++|..+..            
T Consensus        68 D~lVnnAG~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~-----~~G~ii~i~S~~~~~------------  130 (234)
T d1o5ia_          68 DILVLNAGGPKAGFFDELTNEDFKEAIDSLFLNMIKIVRNYLPAMKEK-----GWGRIVAITSFSVIS------------  130 (234)
T ss_dssp             SEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----TCEEEEEECCGGGTS------------
T ss_pred             cEEEecccccCCcchhhhhhHHHHHHhhhhhhhhhhhhhccccccccc-----ccccccccccccccc------------
Confidence            99999999753  36678999999999999999999999999999987     579999999987765            


Q ss_pred             CCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCCcchhhhhhhhhhhhhHhhhccccChH
Q 025509          159 DPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRHNSLFRSMNTILHALPGIAGKCLLKNVQ  238 (251)
Q Consensus       159 ~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (251)
                         +.+....|+++|+|+.+|++++|.|++++|  |+||+|+||+++|++..........+.+....|.    ..+-+++
T Consensus       131 ---~~~~~~~Y~asKaal~~ltk~lA~ela~~g--IrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~pl----~R~~~pe  201 (234)
T d1o5ia_         131 ---PIENLYTSNSARMALTGFLKTLSFEVAPYG--ITVNCVAPGWTETERVKELLSEEKKKQVESQIPM----RRMAKPE  201 (234)
T ss_dssp             ---CCTTBHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECSBCCTTHHHHSCHHHHHHHHTTSTT----SSCBCHH
T ss_pred             ---cccccccchhHHHHHHHHHHHHHHHhcccC--eEEeecccCccchhhhhhhcCHHHHHHHHhcCCC----CCCcCHH
Confidence               778888999999999999999999999999  9999999999999997754333333333333332    3455677


Q ss_pred             HHHHH
Q 025509          239 QVILN  243 (251)
Q Consensus       239 ~~~~~  243 (251)
                      +.+..
T Consensus       202 diA~~  206 (234)
T d1o5ia_         202 EIASV  206 (234)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            76654

>d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=7.9e-40  Score=273.68  Aligned_cols=202  Identities=26%  Similarity=0.286  Sum_probs=168.0

Q ss_pred             CEEEEECCCChhHHHHHHHHHHc-CCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCC
Q 025509            1 MDIVITGATSGIGTETARVLALR-GVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQ   79 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~-G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~   79 (251)
                      +++|||||++|||+++|++|+++ |++|++++|++++++++.+++++.  +.++.++++|++|.++++++++++.+++|+
T Consensus         4 rVAlVTGas~GIG~a~A~~la~~~g~~Vi~~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dvs~~~sv~~~~~~~~~~~g~   81 (275)
T d1wmaa1           4 HVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAE--GLSPRFHQLDIDDLQSIRALRDFLRKEYGG   81 (275)
T ss_dssp             CEEEESSCSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHHHT--TCCCEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred             eEEEECCCCCHHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHhc--CCcEEEEEEecCCHHHHHHHHHHHHHhcCC
Confidence            46799999999999999999986 899999999999999999999876  457899999999999999999999999999


Q ss_pred             eeEEEEcCCCCCC--CCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccc--
Q 025509           80 LNILINNAGIMGT--PFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFD--  155 (251)
Q Consensus        80 id~lv~~ag~~~~--~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~--  155 (251)
                      ||+||||||+..+  ..+.+.++|+..+++|+.|++.++++++|+|++       .|+||++||..+..+.+...++.  
T Consensus        82 iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~-------~g~ivnisS~~~~~~~~~~~~y~~~  154 (275)
T d1wmaa1          82 LDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKP-------QGRVVNVSSIMSVRALKSCSPELQQ  154 (275)
T ss_dssp             EEEEEECCCCCCCTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEE-------EEEEEEECCHHHHHHHHTSCHHHHH
T ss_pred             cEEEEEcCCcCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHh-------cCCcccccccceeccccccchhhhh
Confidence            9999999998643  455667889999999999999999999999964       48999999988765432221110  


Q ss_pred             -------------------------cCCCCCCCCcccccchhHHHHHHHHHHHHHHhccC--CCcEEEEEeeCCcccCCc
Q 025509          156 -------------------------KINDPSGYNGFRAYSQSKLANILHANELARRLKED--GVDITANSVHPGAIATNI  208 (251)
Q Consensus       156 -------------------------~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~--g~~i~v~~v~Pg~v~t~~  208 (251)
                                               ... ..+..+...|++||+++.+|++.++++++++  +.+|+||+|+||+|+|+|
T Consensus       155 k~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~aY~~sK~a~~~~t~~la~~l~~~~~~~~I~vn~v~PG~v~T~m  233 (275)
T d1wmaa1         155 KFRSETITEEELVGLMNKFVEDTKKGVH-QKEGWPSSAYGVTKIGVTVLSRIHARKLSEQRKGDKILLNACCPGWVRTDM  233 (275)
T ss_dssp             HHHCSSCCHHHHHHHHHHHHHHHHTTCT-TTTTCCSCHHHHHHHHHHHHHHHHHHHHHHHCTTSCCEEEEEECCSBCSTT
T ss_pred             hhcccccchhhhccccccchhccccccc-ccCCCchHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEEecccccCCc
Confidence                                     001 1122234579999999999999999999763  123999999999999999


Q ss_pred             ccCC
Q 025509          209 IRHN  212 (251)
Q Consensus       209 ~~~~  212 (251)
                      ..+.
T Consensus       234 ~~~~  237 (275)
T d1wmaa1         234 AGPK  237 (275)
T ss_dssp             TCTT
T ss_pred             ccCc
Confidence            8754

>d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Thermus thermophilus [TaxId: 274]

Probab=100.00  E-value=1.1e-38  Score=263.96  Aligned_cols=212  Identities=12%  Similarity=0.124  Sum_probs=167.9

Q ss_pred             CEEEEECCCC--hhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCC
Q 025509            1 MDIVITGATS--GIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHH   78 (251)
Q Consensus         1 k~vlItG~s~--gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g   78 (251)
                      |++|||||++  |||+++|++|+++|++|++++|+++..++.. ++.+.  .....++++|++++++++++++++.+++|
T Consensus         9 K~alITGas~~~GIG~aiA~~la~~Ga~V~i~~~~~~~~~~~~-~~~~~--~~~~~~~~~D~~~~~~v~~~~~~~~~~~g   85 (256)
T d1ulua_           9 KKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAERLRPEAE-KLAEA--LGGALLFRADVTQDEELDALFAGVKEAFG   85 (256)
T ss_dssp             CEEEEESCCCSSSHHHHHHHHHHHTTCEEEEEESSGGGHHHHH-HHHHH--TTCCEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CEEEEECCCCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHHHH-Hhhhc--cCcccccccccCCHHHHHHHHHHHHHhcC
Confidence            7899999886  9999999999999999999999876555443 34443  34677899999999999999999999999


Q ss_pred             CeeEEEEcCCCCC------CCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCc
Q 025509           79 QLNILINNAGIMG------TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGI  152 (251)
Q Consensus        79 ~id~lv~~ag~~~------~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~  152 (251)
                      ++|+||||||+..      +..+.+.++|+..+++|+.+++.+++++.|+|++       .|+||++||..+..      
T Consensus        86 ~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~-------~G~Iv~isS~~~~~------  152 (256)
T d1ulua_          86 GLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVAVARRAEPLLRE-------GGGIVTLTYYASEK------  152 (256)
T ss_dssp             SEEEEEECCCCCCHHHHSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEE-------EEEEEEEECGGGTS------
T ss_pred             CceEEEeccccccccccccchhhhhhhhhhHhhhhhHHHHHHHHHHHHHHhcc-------CCEEEEEeehHhcC------
Confidence            9999999999753      2456788899999999999999999999998864       48999999988876      


Q ss_pred             ccccCCCCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCCcchhh-hhhhhhhhhhHhhh
Q 025509          153 RFDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRHNSLFRS-MNTILHALPGIAGK  231 (251)
Q Consensus       153 ~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~~~~~~~-~~~~~~~~~~~~~~  231 (251)
                               +.+++.+|+++|+|+++|+++||.|++++|  ||||+|+||++.|++......... .+.+....|    -
T Consensus       153 ---------~~~~~~~Y~asKaal~~ltr~lA~ela~~g--IrVN~I~PG~i~t~~~~~~~~~~~~~~~~~~~~p----l  217 (256)
T d1ulua_         153 ---------VVPKYNVMAIAKAALEASVRYLAYELGPKG--VRVNAISAGPVRTVAARSIPGFTKMYDRVAQTAP----L  217 (256)
T ss_dssp             ---------BCTTCHHHHHHHHHHHHHHHHHHHHHGGGT--CEEEEEEECCC----------CHHHHHHHHHHST----T
T ss_pred             ---------CCCCchHHHHHHHHHHHHHHHHHHHhcccC--CEEeeeccceeeeccccchhhhHHHHHHHHhcCC----C
Confidence                     778889999999999999999999999999  999999999999999876543222 222222232    2


Q ss_pred             ccccChHHHHHH
Q 025509          232 CLLKNVQQVILN  243 (251)
Q Consensus       232 ~~~~~~~~~~~~  243 (251)
                      ...-++++.+..
T Consensus       218 ~R~~~pedvA~~  229 (256)
T d1ulua_         218 RRNITQEEVGNL  229 (256)
T ss_dssp             SSCCCHHHHHHH
T ss_pred             CCCcCHHHHHHH
Confidence            345567777764

>d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase)
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=100.00  E-value=3.1e-38  Score=263.54  Aligned_cols=186  Identities=23%  Similarity=0.328  Sum_probs=165.7

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecC-chhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCC
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRD-IAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQ   79 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~-~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~   79 (251)
                      |++|||||++|||+++|++|+++|++|++++|+ ++.++++.+++.+.  +.++.++++|++++++++++++++.+++|+
T Consensus        19 K~~lITGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~~~~~~--g~~~~~~~~D~~~~~~v~~~~~~~~~~~g~   96 (272)
T d1g0oa_          19 KVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKN--GSDAACVKANVGVVEDIVRMFEEAVKIFGK   96 (272)
T ss_dssp             CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT--TCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCchHHHHHHHHHHHhh--CCceeeEeCCCCCHHHHHHHHHHHHHHhCC
Confidence            789999999999999999999999999999876 45567777777665  567999999999999999999999999999


Q ss_pred             eeEEEEcCCCCC--CCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccccC
Q 025509           80 LNILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKI  157 (251)
Q Consensus        80 id~lv~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~  157 (251)
                      +|++|||+|...  +..+.+.++|++.+++|+.+++.+++++.|+|.+       .+++++++|..+...          
T Consensus        97 idilV~nag~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~-------~g~~i~i~s~~~~~~----------  159 (272)
T d1g0oa_          97 LDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEI-------GGRLILMGSITGQAK----------  159 (272)
T ss_dssp             CCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCT-------TCEEEEECCGGGTCS----------
T ss_pred             CCccccccccchhhhhhhhhhhHHHHHhhhccceeeeecccccccccc-------ccccccccccccccc----------
Confidence            999999999753  3667889999999999999999999999999975       478999988765431          


Q ss_pred             CCCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccC
Q 025509          158 NDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  211 (251)
Q Consensus       158 ~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  211 (251)
                          +.+.+..|+++|+|+++|+++||+|++++|  ||||+|+||+++|++.+.
T Consensus       160 ----~~~~~~~Y~asKaal~~ltk~lA~e~~~~g--IrVN~I~PG~v~T~~~~~  207 (272)
T d1g0oa_         160 ----AVPKHAVYSGSKGAIETFARCMAIDMADKK--ITVNVVAPGGIKTDMYHA  207 (272)
T ss_dssp             ----SCSSCHHHHHHHHHHHHHHHHHHHHHGGGT--CEEEEEEECCBSSHHHHH
T ss_pred             ----cccchhhHHHHHHHHHHHHHHHHHHhchhC--eEEEEEccCCcCChHHHH
Confidence                566778899999999999999999999999  999999999999998654

>d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative carbonyl reductase sniffer
species: Caenorhabditis elegans [TaxId: 6239]

Probab=100.00  E-value=7.4e-38  Score=258.15  Aligned_cols=197  Identities=28%  Similarity=0.333  Sum_probs=157.2

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCC--EEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCC
Q 025509            1 MDIVITGATSGIGTETARVLALRGV--HVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHH   78 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~--~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g   78 (251)
                      |+||||||++|||+++|++|+++|+  +|++++|+.++++++.+    .. +.++.++++|+++.++++++++++.+.++
T Consensus         4 KtilITGassGIG~a~a~~la~~G~~~~Vi~~~R~~~~~~~l~~----~~-~~~~~~~~~Dvs~~~~v~~~~~~i~~~~~   78 (250)
T d1yo6a1           4 GSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKS----IK-DSRVHVLPLTVTCDKSLDTFVSKVGEIVG   78 (250)
T ss_dssp             SEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCHHHHT----CC-CTTEEEEECCTTCHHHHHHHHHHHHHHHG
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCCCEEEEEeCCHHHHHHHHH----hh-CCceEEEEEecCCHHHHHHHHHHHHHHhC
Confidence            7899999999999999999999996  78999999988776543    22 56799999999999999999999988765


Q ss_pred             --CeeEEEEcCCCCC---CCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhcc------CCCCceEEEEcCcccccc
Q 025509           79 --QLNILINNAGIMG---TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARK------SGGEGRIINVSSEGHRLA  147 (251)
Q Consensus        79 --~id~lv~~ag~~~---~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~------~~~~g~iv~vsS~~~~~~  147 (251)
                        ++|+||||||+..   +..+.+.++|++.+++|+.|++.++++++|+|+++...      ....+++++++|......
T Consensus        79 ~~~idilinnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~l~~~~~~~~~~~~~~~~~~~i~~s~~~~~~~  158 (250)
T d1yo6a1          79 SDGLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVLLTQKLLPLLKNAASKESGDQLSVSRAAVITISSGLGSIT  158 (250)
T ss_dssp             GGCCCEEEECCCCCCCBCTTSCCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHHHSSCSSCCCTTTCEEEEECCGGGCST
T ss_pred             CCCeEEEEEcCcccCCCCccccCCHHHHHHHHHHHhhhHHHHHHHHHHHHHHhccCCCCccccceecccccccccccccc
Confidence              4999999999753   35577889999999999999999999999999886431      123588999998765542


Q ss_pred             ccCCcccccCCCCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCC
Q 025509          148 YHEGIRFDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRHN  212 (251)
Q Consensus       148 ~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~~  212 (251)
                      ...        ...+..+..+|++||+|+.+|+++|+.|+++.|  |+||+|+||+|+|+|....
T Consensus       159 ~~~--------~~~~~~~~~aY~aSKaal~~l~~~la~el~~~g--I~v~~i~PG~v~T~m~~~~  213 (250)
T d1yo6a1         159 DNT--------SGSAQFPVLAYRMSKAAINMFGRTLAVDLKDDN--VLVVNFCPGWVQTNLGGKN  213 (250)
T ss_dssp             TCC--------STTSSSCBHHHHHHHHHHHHHHHHHHHHTGGGT--CEEEEEECCCC--------
T ss_pred             CCc--------ccccchhHHHHHHHHHHHHHHHHHHHHHhcccC--eEEEEEecCCCCCCCCCCC
Confidence            211        111333456799999999999999999999999  9999999999999997643

>d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR)
species: Human (Homo sapiens), [TaxId: 9606]

Probab=100.00  E-value=1.2e-36  Score=256.60  Aligned_cols=190  Identities=22%  Similarity=0.183  Sum_probs=167.2

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      |++|||||++|||+++|++|+++|++|++++|+.+++++..+++.+.. +..+.++++|+++.++++++++.+.++++++
T Consensus        26 K~alITGas~GIG~aiA~~la~~Ga~Vii~~r~~~~l~~~~~~l~~~~-g~~~~~~~~D~~~~~~v~~~~~~~~~~~g~i  104 (294)
T d1w6ua_          26 KVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQT-GNKVHAIQCDVRDPDMVQNTVSELIKVAGHP  104 (294)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHH-SSCEEEEECCTTCHHHHHHHHHHHHHHTCSC
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHHhc-CCceEEEEecccChHHHHHHhhhhhhhcccc
Confidence            789999999999999999999999999999999999999998887765 5678999999999999999999999999999


Q ss_pred             eEEEEcCCCCCC--CCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccccCC
Q 025509           81 NILINNAGIMGT--PFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKIN  158 (251)
Q Consensus        81 d~lv~~ag~~~~--~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~  158 (251)
                      |+||||||....  ..+.+.++|+..+.+|+.+.+.+.+...+.+...    ...+.+++++|.++..            
T Consensus       105 DilvnnAg~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~----~~~~~i~~~ss~~~~~------------  168 (294)
T d1w6ua_         105 NIVINNAAGNFISPTERLSPNAWKTITDIVLNGTAFVTLEIGKQLIKA----QKGAAFLSITTIYAET------------  168 (294)
T ss_dssp             SEEEECCCCCCCSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHT----TCCEEEEEECCTHHHH------------
T ss_pred             chhhhhhhhccccccccchhhhhhhheeeecccchhhhhhhhcccccc----cccccccccccchhhh------------
Confidence            999999997643  5677889999999999999999999988887664    2467888888887776            


Q ss_pred             CCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCC
Q 025509          159 DPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRHN  212 (251)
Q Consensus       159 ~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~~  212 (251)
                         +.++..+|+++|+|+.+|++++|+|++++|  ||||+|+||+|+|++....
T Consensus       169 ---~~~~~~~YsasKaal~~ltk~lA~ela~~g--IrVN~I~PG~i~T~~~~~~  217 (294)
T d1w6ua_         169 ---GSGFVVPSASAKAGVEAMSKSLAAEWGKYG--MRFNVIQPGPIKTKGAFSR  217 (294)
T ss_dssp             ---CCTTCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECCBCC------
T ss_pred             ---cccccchHHHHHHHHHHHHHHHHHHHhHhC--eEEEEEccCccccchhhhc
Confidence               677888999999999999999999999999  9999999999999997653

>d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dehydrogenase/reductase SDR family member 6, DHRS6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.1e-37  Score=254.55  Aligned_cols=179  Identities=24%  Similarity=0.359  Sum_probs=156.4

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      |++|||||++|||+++|+.|+++|++|++++|++++++++.+       ...+....+|+.+.+.++...+    .++++
T Consensus         7 K~alITGas~GIG~aia~~la~~G~~Vi~~~r~~~~l~~~~~-------~~~~~~~~~d~~~~~~~~~~~~----~~~~i   75 (245)
T d2ag5a1           7 KVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELEK-------YPGIQTRVLDVTKKKQIDQFAN----EVERL   75 (245)
T ss_dssp             CEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHGGGGG-------STTEEEEECCTTCHHHHHHHHH----HCSCC
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHh-------ccCCceeeeecccccccccccc----ccccc
Confidence            789999999999999999999999999999999877655432       3457888999988776665544    55799


Q ss_pred             eEEEEcCCCCCC--CCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccccCC
Q 025509           81 NILINNAGIMGT--PFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKIN  158 (251)
Q Consensus        81 d~lv~~ag~~~~--~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~  158 (251)
                      |+||||||...+  +.+.+.++|++.+++|+.+++.+++++.|+|.++     +.|+||+++|..+...           
T Consensus        76 d~lVn~ag~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~-----~~g~Ii~isS~~~~~~-----------  139 (245)
T d2ag5a1          76 DVLFNVAGFVHHGTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQ-----KSGNIINMSSVASSVK-----------  139 (245)
T ss_dssp             SEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----TCEEEEEECCSBTTTB-----------
T ss_pred             eeEEecccccCCCChhhCCHHHHHHHHHHhhccchhHHHhhCcccccC-----CCceeeeeechhhccC-----------
Confidence            999999997644  6788999999999999999999999999999887     5799999999876431           


Q ss_pred             CCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccC
Q 025509          159 DPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  211 (251)
Q Consensus       159 ~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  211 (251)
                         +.+...+|+++|+|+++|+|+||.|++++|  |+||+|+||+++||+...
T Consensus       140 ---~~~~~~~Y~~sKaal~~l~r~lA~e~~~~g--IrvN~I~PG~i~T~~~~~  187 (245)
T d2ag5a1         140 ---GVVNRCVYSTTKAAVIGLTKSVAADFIQQG--IRCNCVCPGTVDTPSLQE  187 (245)
T ss_dssp             ---CCTTBHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEESCEECHHHHH
T ss_pred             ---CccchhHHHHHHHHHHHHHHHHHHHhhhhC--cEEEEEeeceeechhhHh
Confidence               567888999999999999999999999999  999999999999999764

>d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2e-36  Score=249.20  Aligned_cols=217  Identities=23%  Similarity=0.247  Sum_probs=175.6

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      |++|||||++|||+++|++|+++|++|++++|+++++++..+++     +.......+|+.+.+.++....++....+.+
T Consensus         6 KvalITGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (248)
T d2o23a1           6 LVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKL-----GNNCVFAPADVTSEKDVQTALALAKGKFGRV   80 (248)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSSHHHHHHHH-----CTTEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHh-----CCCcccccccccccccccccccccccccccc
Confidence            78999999999999999999999999999999999998888777     6678999999999999999999998888899


Q ss_pred             eEEEEcCCCCC--------CCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhcc-CCCCceEEEEcCccccccccCC
Q 025509           81 NILINNAGIMG--------TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARK-SGGEGRIINVSSEGHRLAYHEG  151 (251)
Q Consensus        81 d~lv~~ag~~~--------~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~-~~~~g~iv~vsS~~~~~~~~~~  151 (251)
                      |.+++|+++..        +..+.+.++|++++++|+.+++++++++.|++..+... ....|+||++||.++..     
T Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~~~~~~G~Ii~isS~~~~~-----  155 (248)
T d2o23a1          81 DVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFE-----  155 (248)
T ss_dssp             CEEEECCCCCCCCCSEETTTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHHHH-----
T ss_pred             cccccccccccCCCcccccccccchHHHHHHHHhHHHHHHHHHHHHhHHHHHHhhhhccCCceEEEEecchhhcc-----
Confidence            99999987542        23456788999999999999999999999999775332 13468999999999887     


Q ss_pred             cccccCCCCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCCcchhhhhhhhhhhhhHhhh
Q 025509          152 IRFDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRHNSLFRSMNTILHALPGIAGK  231 (251)
Q Consensus       152 ~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~  231 (251)
                                +.+++++|+++|+|+++|+++|++|++++|  |+||+|+||++.|+|....+. .....+....|.   .
T Consensus       156 ----------~~~~~~~Y~asKaal~~lt~~la~e~~~~g--IrvN~I~PG~i~T~~~~~~~~-~~~~~~~~~~pl---~  219 (248)
T d2o23a1         156 ----------GQVGQAAYSASKGGIVGMTLPIARDLAPIG--IRVMTIAPGLFGTPLLTSLPE-KVCNFLASQVPF---P  219 (248)
T ss_dssp             ----------CCTTCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECCBCCC-----------CHHHHTCSS---S
T ss_pred             ----------CCCCchHHHHHHHHHHHHHHHHHHHhcccC--cceeeeccCceecchhhcCCH-HHHHHHHhcCCC---C
Confidence                      788899999999999999999999999999  999999999999999876432 222222222221   1


Q ss_pred             ccccChHHHHHH
Q 025509          232 CLLKNVQQVILN  243 (251)
Q Consensus       232 ~~~~~~~~~~~~  243 (251)
                      ..+-++++.+..
T Consensus       220 ~R~g~peevA~~  231 (248)
T d2o23a1         220 SRLGDPAEYAHL  231 (248)
T ss_dssp             CSCBCHHHHHHH
T ss_pred             CCCcCHHHHHHH
Confidence            234467776654

>d1e7wa_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Leishmania major [TaxId: 5664]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Leishmania major [TaxId: 5664]

Probab=100.00  E-value=1.6e-33  Score=235.74  Aligned_cols=189  Identities=19%  Similarity=0.193  Sum_probs=152.2

Q ss_pred             EEEEECCCChhHHHHHHHHHHcCCEEEEEec-CchhHHHHHHHHHhhCCCCceEE-----------------EEecCCCH
Q 025509            2 DIVITGATSGIGTETARVLALRGVHVVMGVR-DIAAGKDVKETIVKEIPSAKVDA-----------------MELDLSSL   63 (251)
Q Consensus         2 ~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r-~~~~~~~~~~~~~~~~~~~~v~~-----------------~~~D~~~~   63 (251)
                      ++|||||++|||+++|++|+++|++|+++++ +++.++.+.+++.+..+ .....                 +.+|+++.
T Consensus         4 VAlITGas~GIG~aiA~~la~~Ga~V~i~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~d~~~~~~~~~~~~~~~~dv~~~   82 (284)
T d1e7wa_           4 VALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRP-NSAITVQADLSNVATAPVSGADGSAPVTLF   82 (284)
T ss_dssp             EEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHST-TCEEEEECCCSSSCBCCCC----CCCBCHH
T ss_pred             EEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCCHHHHHHHHHHHHhhcC-CceEEEEeecccccccccccccccccCCCH
Confidence            6899999999999999999999999998876 55667777777776653 33444                 45569999


Q ss_pred             HHHHHHHHHHHhcCCCeeEEEEcCCCCCC--CCcCCchhh--------------HHHHHHHHHHHHHHHHHHHHHHHHhh
Q 025509           64 ASVRNFASEYNIQHHQLNILINNAGIMGT--PFMLSKDNI--------------ELQFATNHLGHFLLTNLLLDTMKKTA  127 (251)
Q Consensus        64 ~~i~~~~~~~~~~~g~id~lv~~ag~~~~--~~~~~~~~~--------------~~~~~~n~~~~~~l~~~~~~~~~~~~  127 (251)
                      ++++++++++.+++|++|+||||||...+  +.+.+.++|              ..++.+|+.+++.+.+++.+.+...+
T Consensus        83 ~~v~~~~~~~~~~~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~  162 (284)
T d1e7wa_          83 TRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAGTP  162 (284)
T ss_dssp             HHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCCC-------------HHHHHHHHHHHHHHTHHHHHHHHHHHHHHHTSC
T ss_pred             HHHHHHHHHHHHHhCCCCEEEecCCccCCCchhhCCHHHhhhhhhhHHHHHHHHHHHHhhheeeeeeeeccccchhhhhH
Confidence            99999999999999999999999997643  444444444              34789999999999999999876543


Q ss_pred             c-cCCCCceEEEEcCccccccccCCcccccCCCCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccC
Q 025509          128 R-KSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIAT  206 (251)
Q Consensus       128 ~-~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t  206 (251)
                      . ..+..++|++++|.....               +.+++.+|+++|+|+.+|+++||+|++++|  |+||+|+||++.+
T Consensus       163 ~~~~~~~~~ii~~~s~~~~~---------------~~~~~~~Y~asKaal~~lt~~lA~el~~~g--IrvN~I~PG~t~~  225 (284)
T d1e7wa_         163 AKHRGTNYSIINMVDAMTNQ---------------PLLGYTIYTMAKGALEGLTRSAALELAPLQ--IRVNGVGPGLSVL  225 (284)
T ss_dssp             GGGSCSCEEEEEECCTTTTS---------------CCTTCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEESSBCC
T ss_pred             HHhcCCCCcccccccccccC---------------CccceeeeccccccchhhhHHHHHHhCCcc--ccccccccccccc
Confidence            2 223568899999977665               777889999999999999999999999999  9999999998655


Q ss_pred             Cc
Q 025509          207 NI  208 (251)
Q Consensus       207 ~~  208 (251)
                      ..
T Consensus       226 ~~  227 (284)
T d1e7wa_         226 VD  227 (284)
T ss_dssp             GG
T ss_pred             cc
Confidence            43

>d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=5.7e-35  Score=238.77  Aligned_cols=175  Identities=15%  Similarity=0.135  Sum_probs=149.9

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhc--CC
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQ--HH   78 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~--~g   78 (251)
                      |+||||||++|||+++|+.|+++|++|+++++++...            ......+.+|.++.++.+.+..++.+.  .+
T Consensus         3 K~vlITGas~GIG~a~a~~l~~~G~~V~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   70 (236)
T d1dhra_           3 RRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENEE------------ASASVIVKMTDSFTEQADQVTAEVGKLLGDQ   70 (236)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSCCTT------------SSEEEECCCCSCHHHHHHHHHHHHHHHHTTC
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCcccc------------ccccceeecccCcHHHHHHHHHHHHHHhCCC
Confidence            7899999999999999999999999999999876430            234566678888888888877776554  45


Q ss_pred             CeeEEEEcCCCCC---CCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccc
Q 025509           79 QLNILINNAGIMG---TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFD  155 (251)
Q Consensus        79 ~id~lv~~ag~~~---~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~  155 (251)
                      ++|+||||||...   +..+.+.++|++++++|+.+++.++++++|+|++       +|+||++||.++..         
T Consensus        71 ~iD~lInnAG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~-------~G~Iv~isS~~~~~---------  134 (236)
T d1dhra_          71 KVDAILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKE-------GGLLTLAGAKAALD---------  134 (236)
T ss_dssp             CEEEEEECCCCCCCBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEE-------EEEEEEECCGGGGS---------
T ss_pred             CceEEEECCcccccccchhcCCHHHHHHHHHHcchHHHHHHHHHHHhccc-------ccceeEEccHHHcC---------
Confidence            7999999999643   2445667889999999999999999999999954       58999999998876         


Q ss_pred             cCCCCCCCCcccccchhHHHHHHHHHHHHHHhc--cCCCcEEEEEeeCCcccCCcccC
Q 025509          156 KINDPSGYNGFRAYSQSKLANILHANELARRLK--EDGVDITANSVHPGAIATNIIRH  211 (251)
Q Consensus       156 ~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~--~~g~~i~v~~v~Pg~v~t~~~~~  211 (251)
                            +.+++.+|++||+|+.+|+++|+.|++  +.|  |+||+|+||+++|+|.+.
T Consensus       135 ------~~~~~~~Y~asKaal~~lt~~la~El~~~~~g--I~vn~v~PG~v~T~~~~~  184 (236)
T d1dhra_         135 ------GTPGMIGYGMAKGAVHQLCQSLAGKNSGMPSG--AAAIAVLPVTLDTPMNRK  184 (236)
T ss_dssp             ------CCTTBHHHHHHHHHHHHHHHHHTSTTSSCCTT--CEEEEEEESCEECHHHHH
T ss_pred             ------CccCCcccHHHHHHHHHHHHHHHHHhccCCCc--EEEEEEEeccCcCCcchh
Confidence                  778889999999999999999999998  457  999999999999999663

>d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=100.00  E-value=2.2e-34  Score=235.16  Aligned_cols=176  Identities=12%  Similarity=0.058  Sum_probs=148.2

Q ss_pred             EEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHh--cCCC
Q 025509            2 DIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNI--QHHQ   79 (251)
Q Consensus         2 ~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~--~~g~   79 (251)
                      +||||||++|||+++|++|+++|++|++++|++...            ......+.+|+.+.+......+.+..  ++++
T Consensus         4 kVlITGas~GIG~aia~~l~~~G~~V~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~   71 (235)
T d1ooea_           4 KVIVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQ------------ADSNILVDGNKNWTEQEQSILEQTASSLQGSQ   71 (235)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCCTT------------SSEEEECCTTSCHHHHHHHHHHHHHHHHTTCC
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCEEEEEECCchhc------------ccccceeccccCchhHHHHHHHHHHHHhcCCC
Confidence            689999999999999999999999999999986531            23455567788877777766666554  5789


Q ss_pred             eeEEEEcCCCCC---CCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCccccc
Q 025509           80 LNILINNAGIMG---TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDK  156 (251)
Q Consensus        80 id~lv~~ag~~~---~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~  156 (251)
                      ||+||||||...   +..+.+.++|+.++++|+.+++.++++++|+|++       +|+||++||.++..          
T Consensus        72 iD~linnAG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~-------~g~Iv~isS~~~~~----------  134 (235)
T d1ooea_          72 VDGVFCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKP-------GGLLQLTGAAAAMG----------  134 (235)
T ss_dssp             EEEEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEE-------EEEEEEECCGGGGS----------
T ss_pred             eeEEEECCcccccccccccCcHHHHhhHhhhHHHHHHHHhhhccccccc-------ceEEEEeccHHhcC----------
Confidence            999999999643   2334456789999999999999999999999954       48999999988776          


Q ss_pred             CCCCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccC
Q 025509          157 INDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  211 (251)
Q Consensus       157 ~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  211 (251)
                           +.+++.+|++||+|+++|+++|+.|++..+.+|+||+|+||+++|++.+.
T Consensus       135 -----~~~~~~~Y~asKaal~~l~~~la~e~~~~~~~i~v~~i~Pg~~~T~~~~~  184 (235)
T d1ooea_         135 -----PTPSMIGYGMAKAAVHHLTSSLAAKDSGLPDNSAVLTIMPVTLDTPMNRK  184 (235)
T ss_dssp             -----CCTTBHHHHHHHHHHHHHHHHHHSTTSSCCTTCEEEEEEESCBCCHHHHH
T ss_pred             -----CcccccchHHHHHHHHHHHHHHHHHhccCCCceEEEEEecCcCcCcchhh
Confidence                 78889999999999999999999999864445999999999999998764

>d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=1.9e-32  Score=226.29  Aligned_cols=212  Identities=13%  Similarity=0.175  Sum_probs=170.5

Q ss_pred             CEEEEECCCC--hhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCC
Q 025509            1 MDIVITGATS--GIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHH   78 (251)
Q Consensus         1 k~vlItG~s~--gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g   78 (251)
                      |++|||||++  |||+++|+.|+++|++|++++|+++..+.+ +++...  .....++..|+++..++...+.++...++
T Consensus         6 K~~lITGass~~GIG~aiA~~l~~~G~~V~i~~~~~~~~~~~-~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (258)
T d1qsga_           6 KRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRV-EEFAAQ--LGSDIVLQCDVAEDASIDTMFAELGKVWP   82 (258)
T ss_dssp             CEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSTTTHHHH-HHHHHH--TTCCCEEECCTTCHHHHHHHHHHHHTTCS
T ss_pred             CEEEEECCCCchhHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HHHHhh--cCCcceeecccchHHHHHHHHHHhhhccc
Confidence            7899999998  899999999999999999999997655544 444443  34677889999999999999999999999


Q ss_pred             CeeEEEEcCCCCCC--C-----CcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCC
Q 025509           79 QLNILINNAGIMGT--P-----FMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEG  151 (251)
Q Consensus        79 ~id~lv~~ag~~~~--~-----~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~  151 (251)
                      ++|++|+|++....  .     .+...+.|...+++|+.+.+.+++++.+.+.+       ++.|+++||.++..     
T Consensus        83 ~~d~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~Ii~iss~~~~~-----  150 (258)
T d1qsga_          83 KFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNP-------GSALLTLSYLGAER-----  150 (258)
T ss_dssp             SEEEEEECCCCCCGGGGSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE-------EEEEEEEECGGGTS-----
T ss_pred             ccceEEEeecccccccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHhccC-------CcEEEEecchhhcc-----
Confidence            99999999987532  1     23455678889999999999999999888744       46799999987665     


Q ss_pred             cccccCCCCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCCcchhhh-hhhhhhhhhHhh
Q 025509          152 IRFDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRHNSLFRSM-NTILHALPGIAG  230 (251)
Q Consensus       152 ~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~~~~~~~~-~~~~~~~~~~~~  230 (251)
                                +.+.+..|+++|+|+++|++++|.|++++|  |+||+|+||+|+|++.......... .......|    
T Consensus       151 ----------~~~~~~~Y~~sKaal~~ltr~lA~el~~~g--IrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~p----  214 (258)
T d1qsga_         151 ----------AIPNYNVMGLAKASLEANVRYMANAMGPEG--VRVNAISAGPIRTLAASGIKDFRKMLAHCEAVTP----  214 (258)
T ss_dssp             ----------BCTTTTHHHHHHHHHHHHHHHHHHHHTTTT--EEEEEEEECCCCCTTGGGSTTHHHHHHHHHHHST----
T ss_pred             ----------CCCCcHHHHHHHHHHHHHHHHHHHHhCccC--ceeecccccccccccccccchhhhHHHHHHhCCC----
Confidence                      677888999999999999999999999999  9999999999999998764332222 22222222    


Q ss_pred             hccccChHHHHHH
Q 025509          231 KCLLKNVQQVILN  243 (251)
Q Consensus       231 ~~~~~~~~~~~~~  243 (251)
                      -....++++.+..
T Consensus       215 l~R~~~peeia~~  227 (258)
T d1qsga_         215 IRRTVTIEDVGNS  227 (258)
T ss_dssp             TSSCCCHHHHHHH
T ss_pred             CCCCcCHHHHHHH
Confidence            2345567777754

>d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=100.00  E-value=2.6e-32  Score=222.95  Aligned_cols=207  Identities=22%  Similarity=0.210  Sum_probs=164.9

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      |++|||||++|||+++|++|+++|++|++++|+++              +.+...+++|+++......+..+..... ..
T Consensus         2 K~alITGas~GIG~aiA~~la~~Ga~V~i~~~~~~--------------~~~~~~~~~d~~~~~~~~~~~~~~~~~~-~~   66 (241)
T d1uaya_           2 RSALVTGGASGLGRAAALALKARGYRVVVLDLRRE--------------GEDLIYVEGDVTREEDVRRAVARAQEEA-PL   66 (241)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCC--------------SSSSEEEECCTTCHHHHHHHHHHHHHHS-CE
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCcc--------------cccceEeeccccchhhhHHHHHhhhccc-cc
Confidence            79999999999999999999999999999999864              3467788999999999999888877665 45


Q ss_pred             eEEEEcCCCCC------CCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhcc-CCCCceEEEEcCccccccccCCcc
Q 025509           81 NILINNAGIMG------TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARK-SGGEGRIINVSSEGHRLAYHEGIR  153 (251)
Q Consensus        81 d~lv~~ag~~~------~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~-~~~~g~iv~vsS~~~~~~~~~~~~  153 (251)
                      +.++.+++...      .....+.+.|++.+++|+.+.+.+++.+.+.+...... .++.|+||++||..+..       
T Consensus        67 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~G~Ii~isS~~~~~-------  139 (241)
T d1uaya_          67 FAVVSAAGVGLAEKILGKEGPHGLESFRRVLEVNLLGTFNVLRLAAWAMRENPPDAEGQRGVIVNTASVAAFE-------  139 (241)
T ss_dssp             EEEEECCCCCCCCCSBCSSSBCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCCCCTTSCSEEEEEECCTHHHH-------
T ss_pred             cchhhhhhccccccccccccchhHHHHHHHHHHHhhhhHHHHHHHHHHhhhhhhhcccCceeeeeecchhhcc-------
Confidence            66666666432      13345678899999999999999999999997654322 23579999999999887       


Q ss_pred             cccCCCCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCCcchhhhhhhhhhhhhHhhhcc
Q 025509          154 FDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRHNSLFRSMNTILHALPGIAGKCL  233 (251)
Q Consensus       154 ~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (251)
                              +.+++.+|+++|+|+.+|+++||.|++++|  ||||+|+||+++|++......... .......|.   ...
T Consensus       140 --------~~~~~~~Y~asKaal~~lt~~lA~ela~~g--IrVN~V~PG~i~T~~~~~~~~~~~-~~~~~~~~~---~~R  205 (241)
T d1uaya_         140 --------GQIGQAAYAASKGGVVALTLPAARELAGWG--IRVVTVAPGLFDTPLLQGLPEKAK-ASLAAQVPF---PPR  205 (241)
T ss_dssp             --------CCTTCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECSCSSHHHHTSCHHHH-HHHHTTCCS---SCS
T ss_pred             --------CCCCchhhHHHHHHHHHHHHHHHHHHhhcC--CceeeecCCcccccccchhhhhHH-HHHHhcCCC---CCC
Confidence                    788899999999999999999999999999  999999999999999876543222 222222221   123


Q ss_pred             ccChHHHHHH
Q 025509          234 LKNVQQVILN  243 (251)
Q Consensus       234 ~~~~~~~~~~  243 (251)
                      .-++++.+..
T Consensus       206 ~g~pedvA~~  215 (241)
T d1uaya_         206 LGRPEEYAAL  215 (241)
T ss_dssp             CCCHHHHHHH
T ss_pred             CcCHHHHHHH
Confidence            4467777654

>d1uh5a_ c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=100.00  E-value=4.3e-33  Score=238.15  Aligned_cols=187  Identities=17%  Similarity=0.180  Sum_probs=152.3

Q ss_pred             CEEEEEC--CCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCC----------CCceEEEE-----------
Q 025509            1 MDIVITG--ATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIP----------SAKVDAME-----------   57 (251)
Q Consensus         1 k~vlItG--~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~----------~~~v~~~~-----------   57 (251)
                      |++||||  +++|||+++|+.|+++|++|++++++............+.+.          ........           
T Consensus         3 kVAlITGaa~s~GIG~aiA~~la~~GA~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (329)
T d1uh5a_           3 DICFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWPPVYNIFMKNYKNGKFDNDMIIDKDKKMNILDMLPFDASFDTANDI   82 (329)
T ss_dssp             CEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHHHTTTTTGGGEETTTEECCEEEEEECCTTCSSGGGC
T ss_pred             cEEEEeCCCCCChHHHHHHHHHHHcCCEEEEEeCchhhhhhhHHHHHHhhhhHHHHHHHhhhhhhhcccccceehhhccc
Confidence            7899999  668999999999999999999999987654444433322211          01122333           


Q ss_pred             ---------ecCCCHHHHHHHHHHHHhcCCCeeEEEEcCCCCC----CCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHH
Q 025509           58 ---------LDLSSLASVRNFASEYNIQHHQLNILINNAGIMG----TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMK  124 (251)
Q Consensus        58 ---------~D~~~~~~i~~~~~~~~~~~g~id~lv~~ag~~~----~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~  124 (251)
                               +|+++.++++++++++.+.+|+||+||||||...    ++.+.++++|++.+++|+++.+.++|+++|+|.
T Consensus        83 ~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~k~~~~~m~  162 (329)
T d1uh5a_          83 DEETKNNKRYNMLQNYTIEDVANLIHQKYGKINMLVHSLANAKEVQKDLLNTSRKGYLDALSKSSYSLISLCKYFVNIMK  162 (329)
T ss_dssp             CHHHHTSHHHHTCCCCSHHHHHHHHHHHHCCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEE
T ss_pred             chhhhhhhhhhhhhHHHHHHHHHHHHHHhCCCCeeccccccccccCCChhhhhhhhhhhhcccchhHHHHHHHHHHhhcc
Confidence                     3666788899999999999999999999999653    356788999999999999999999999999995


Q ss_pred             HhhccCCCCceEEEEcCccccccccCCcccccCCCCCCCCc-ccccchhHHHHHHHHHHHHHHhcc-CCCcEEEEEeeCC
Q 025509          125 KTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNG-FRAYSQSKLANILHANELARRLKE-DGVDITANSVHPG  202 (251)
Q Consensus       125 ~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~-~~~Y~~sK~a~~~~~~~la~e~~~-~g~~i~v~~v~Pg  202 (251)
                      +       .|+||++||.++..               +.|+ ...|+++|+|+++|+++||.||++ .|  ||||+|+||
T Consensus       163 ~-------~GsIv~iss~~~~~---------------~~p~y~~~y~asKaal~~ltr~lA~Ela~~~g--IRVNaI~PG  218 (329)
T d1uh5a_         163 P-------QSSIISLTYHASQK---------------VVPGYGGGMSSAKAALESDTRVLAYHLGRNYN--IRINTISAG  218 (329)
T ss_dssp             E-------EEEEEEEECGGGTS---------------CCTTCTTTHHHHHHHHHHHHHHHHHHHHHHHC--CEEEEEEEC
T ss_pred             c-------ccccccceeehhcc---------------cccccchhhhhhhccccccchhhHHHHhcccC--cEEEEEecC
Confidence            4       58999999987765               5555 457899999999999999999986 58  999999999


Q ss_pred             cccCCcccC
Q 025509          203 AIATNIIRH  211 (251)
Q Consensus       203 ~v~t~~~~~  211 (251)
                      +|+|++...
T Consensus       219 ~i~T~a~~~  227 (329)
T d1uh5a_         219 PLKSRAATA  227 (329)
T ss_dssp             CCCCTTGGG
T ss_pred             cccchhhhc
Confidence            999976554

>d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Trypanosoma cruzi [TaxId: 5693]

Probab=100.00  E-value=1.2e-31  Score=222.09  Aligned_cols=218  Identities=18%  Similarity=0.147  Sum_probs=163.4

Q ss_pred             EEEEECCCChhHHHHHHHHHHcCCEEEEEecCchh-HHHHHHHHHhhCCCCceEEEEecCC----CHHHHHHHHHHHHhc
Q 025509            2 DIVITGATSGIGTETARVLALRGVHVVMGVRDIAA-GKDVKETIVKEIPSAKVDAMELDLS----SLASVRNFASEYNIQ   76 (251)
Q Consensus         2 ~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~-~~~~~~~~~~~~~~~~v~~~~~D~~----~~~~i~~~~~~~~~~   76 (251)
                      ++|||||++|||+++|++|+++|++|++++|+.++ .+++.+++.+.. +.....+.+|..    ..+.++++++.+.++
T Consensus         3 vAlVTGas~GIG~aia~~la~~G~~Vvi~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (266)
T d1mxha_           3 AAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAAR-AGSAVLCKGDLSLSSSLLDCCEDIIDCSFRA   81 (266)
T ss_dssp             EEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHS-TTCEEEEECCCSSSTTHHHHHHHHHHHHHHH
T ss_pred             EEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCchHHHHHHHHHHHhhc-CCceEEEecccccchhHHHHHHHHHHHHHHH
Confidence            68999999999999999999999999999998554 567777787765 455666666554    456788888888889


Q ss_pred             CCCeeEEEEcCCCCCC--CC-----------cCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCcc
Q 025509           77 HHQLNILINNAGIMGT--PF-----------MLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEG  143 (251)
Q Consensus        77 ~g~id~lv~~ag~~~~--~~-----------~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~  143 (251)
                      +|++|++|||||+..+  ..           +...+.+...+..|..+.+...+...+.+..........+.+++++|..
T Consensus        82 ~g~iDilvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  161 (266)
T d1mxha_          82 FGRCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQVAELFGSNAVAPLFLIRAFARRQGEGGAWRSRNLSVVNLCDAM  161 (266)
T ss_dssp             HSCCCEEEECCCCCCCCCSCC-----------CHHHHHHHHHHHHTHHHHHHHHHHHHTC-------CCCEEEEEECCGG
T ss_pred             hCCCCEEEECCccCCCCcccccccccchhcccccccccccccccccccccchhhhhccccccccccccccccchhhhhcc
Confidence            9999999999997643  11           1123446677888999999888888777765433333467888888877


Q ss_pred             ccccccCCcccccCCCCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCCcchhhhhhhhh
Q 025509          144 HRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRHNSLFRSMNTILH  223 (251)
Q Consensus       144 ~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~  223 (251)
                      +..               +.+++..|++||+|+++|+++||.|++++|  ||||+|+||+++|++.....   ..+.+..
T Consensus       162 ~~~---------------~~~~~~~Y~asKaal~~lt~~lA~e~~~~g--IrVN~I~PG~i~t~~~~~~~---~~~~~~~  221 (266)
T d1mxha_         162 TDL---------------PLPGFCVYTMAKHALGGLTRAAALELAPRH--IRVNAVAPGLSLLPPAMPQE---TQEEYRR  221 (266)
T ss_dssp             GGS---------------CCTTCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEESSBSCCSSSCHH---HHHHHHT
T ss_pred             ccc---------------cCcchhhhhhhHHHHhhhHHHHHHHhCccC--cEEEEeccCcEeccccCCHH---HHHHHHh
Confidence            665               778899999999999999999999999999  99999999999999866532   2223333


Q ss_pred             hhhhHhhhccccChHHHHHH
Q 025509          224 ALPGIAGKCLLKNVQQVILN  243 (251)
Q Consensus       224 ~~~~~~~~~~~~~~~~~~~~  243 (251)
                      .+|.   .-...++++.+..
T Consensus       222 ~~pl---~r~~~~peeva~~  238 (266)
T d1mxha_         222 KVPL---GQSEASAAQIADA  238 (266)
T ss_dssp             TCTT---TSCCBCHHHHHHH
T ss_pred             cCCC---CCCCCCHHHHHHH
Confidence            3331   1123467777764

>d2pd4a1 c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacter pylori [TaxId: 210]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Helicobacter pylori [TaxId: 210]

Probab=99.97  E-value=1.5e-30  Score=216.56  Aligned_cols=217  Identities=15%  Similarity=0.053  Sum_probs=152.7

Q ss_pred             CEEEEECCCC--hhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCC
Q 025509            1 MDIVITGATS--GIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHH   78 (251)
Q Consensus         1 k~vlItG~s~--gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g   78 (251)
                      |++|||||+|  |||+++|++|+++|++|++++|++ .+++..+++.+.  +....++++|+++.++++++++++.+.+|
T Consensus         6 K~alITGaag~~GIG~AiA~~la~~Ga~V~i~~r~~-~~~~~~~~l~~~--~~~~~~~~~d~~~~~~~~~~~~~~~~~~g   82 (274)
T d2pd4a1           6 KKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNE-SLEKRVRPIAQE--LNSPYVYELDVSKEEHFKSLYNSVKKDLG   82 (274)
T ss_dssp             CEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESST-TTHHHHHHHHHH--TTCCCEEECCTTCHHHHHHHHHHHHHHTS
T ss_pred             CEEEEECCCCCcHHHHHHHHHHHHCCCEEEEEeCCH-HHHHHHHHHHhh--CCceeEeeecccchhhHHHHHHHHHHHcC
Confidence            7899999765  999999999999999999999985 455556666665  45677889999999999999999999999


Q ss_pred             CeeEEEEcCCCCCC--CCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCccccc
Q 025509           79 QLNILINNAGIMGT--PFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDK  156 (251)
Q Consensus        79 ~id~lv~~ag~~~~--~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~  156 (251)
                      ++|++|+|+|....  ..+...+.+...+..+..........+...+.+..+   ..+.|+++|+.+...          
T Consensus        83 ~id~lV~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~i~~~s~~~~~~----------  149 (274)
T d2pd4a1          83 SLDFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVYSLIELTNTLKPLLN---NGASVLTLSYLGSTK----------  149 (274)
T ss_dssp             CEEEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEE---EEEEEEEEECGGGTS----------
T ss_pred             CCCeEEeecccccccccccccccccchhhhhhhccccccccccccccccccc---cCcceeeeccccccc----------
Confidence            99999999997643  112222222333333333333333333333333221   234566666655443          


Q ss_pred             CCCCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCCcchhhhhhhhhhhhhHhhhccccC
Q 025509          157 INDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRHNSLFRSMNTILHALPGIAGKCLLKN  236 (251)
Q Consensus       157 ~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (251)
                           +.+....|+++|+|+.+|+++++.|++++|  |+||+|+||++.|++.............   .........+-+
T Consensus       150 -----~~~~~~~y~asK~al~~ltr~lA~e~~~~G--IrvN~I~PG~v~T~~~~~~~~~~~~~~~---~~~~~p~~r~~~  219 (274)
T d2pd4a1         150 -----YMAHYNVMGLAKAALESAVRYLAVDLGKHH--IRVNALSAGPIRTLASSGIADFRMILKW---NEINAPLRKNVS  219 (274)
T ss_dssp             -----BCTTCHHHHHHHHHHHHHHHHHHHHHHTTT--CEEEEEEECCCCCTTGGGSTTHHHHHHH---HHHHSTTSSCCC
T ss_pred             -----ccccchhhhHHHHHHHHHHHhhHHHhcCcC--ceecccccCcccCccccccCchHHHHHH---HhhhhhccCCcC
Confidence                 566778999999999999999999999999  9999999999999998765433332211   111112244556


Q ss_pred             hHHHHHH
Q 025509          237 VQQVILN  243 (251)
Q Consensus       237 ~~~~~~~  243 (251)
                      +++.+..
T Consensus       220 pedIA~~  226 (274)
T d2pd4a1         220 LEEVGNA  226 (274)
T ss_dssp             HHHHHHH
T ss_pred             HHHHHHH
Confidence            7777754

>d1d7oa_ c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=99.97  E-value=1.1e-30  Score=219.76  Aligned_cols=216  Identities=16%  Similarity=0.097  Sum_probs=158.5

Q ss_pred             CEEEEECCCC--hhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCC----------CCceEEEEec---------
Q 025509            1 MDIVITGATS--GIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIP----------SAKVDAMELD---------   59 (251)
Q Consensus         1 k~vlItG~s~--gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~----------~~~v~~~~~D---------   59 (251)
                      |++|||||++  |||+++|++|+++|++|++++|++...............          ...-....+|         
T Consensus         9 K~alVTGass~~GIG~aiA~~la~~Ga~Vvi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   88 (297)
T d1d7oa_           9 KRAFIAGIADDNGYGWAVAKSLAAAGAEILVGTWVPALNIFETSLRRGKFDQSRVLPDGSLMEIKKVYPLDAVFDNPEDV   88 (297)
T ss_dssp             CEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEEEHHHHHHHHHHHHTTTTTGGGBCTTSSBCCEEEEEEECTTCCSGGGS
T ss_pred             CEEEEECCCCCchHHHHHHHHHHHCCCEEEEEeCchhhhhhHHHHHHhhhhhhhhhhhhhhhhhhhhhhhhhhccccccc
Confidence            7899999875  999999999999999999999976543333222211100          0011233343         


Q ss_pred             -----------CCCHHHHHHHHHHHHhcCCCeeEEEEcCCCC----CCCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHH
Q 025509           60 -----------LSSLASVRNFASEYNIQHHQLNILINNAGIM----GTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMK  124 (251)
Q Consensus        60 -----------~~~~~~i~~~~~~~~~~~g~id~lv~~ag~~----~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~  124 (251)
                                 .++..+++++++++.+++|++|+||||||..    .++.+.+.++|++.+++|+.+++.+++++++.+.
T Consensus        89 ~~dv~~~~~~~~~~~~~~~~~~~~~~~~~G~iDilVnnAg~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~  168 (297)
T d1d7oa_          89 PEDVKANKRYAGSSNWTVQEAAECVRQDFGSIDILVHSLANGPEVSKPLLETSRKGYLAAISASSYSFVSLLSHFLPIMN  168 (297)
T ss_dssp             CHHHHTSHHHHHCCCCSHHHHHHHHHHHHSCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEE
T ss_pred             hhhhhhhhhhhhccHHHHHHHHHHHHHHhCCCcccccccccccccccchhhhhcccccccccchhhhhhhhhhHHHHHhh
Confidence                       2445567889999999999999999999964    3466789999999999999999999999988876


Q ss_pred             HhhccCCCCceEEEEcCccccccccCCcccccCCCCCCCCcccccchhHHHHHHHHHHHHHHhc-cCCCcEEEEEeeCCc
Q 025509          125 KTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANILHANELARRLK-EDGVDITANSVHPGA  203 (251)
Q Consensus       125 ~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~-~~g~~i~v~~v~Pg~  203 (251)
                      +       .+.++++++.+....              ..+....|+++|+++.++++.++.|++ ++|  ||||+|+||+
T Consensus       169 ~-------~g~~~~~~~~~~~~~--------------~~~~~~~y~~aKaa~~~l~~~~a~e~~~~~g--IrvN~I~PG~  225 (297)
T d1d7oa_         169 P-------GGASISLTYIASERI--------------IPGYGGGMSSAKAALESDTRVLAFEAGRKQN--IRVNTISAGP  225 (297)
T ss_dssp             E-------EEEEEEEECGGGTSC--------------CTTCTTTHHHHHHHHHHHHHHHHHHHHHHHC--CEEEEEEECC
T ss_pred             c-------CCcceeeeehhhccc--------------ccccccceecccccccccccccchhccccce--EEeccccccc
Confidence            5       356777776554431              345667899999999999999999996 578  9999999999


Q ss_pred             ccCCcccCCcchhhh-hhhhhhhhhHhhhccccChHHHHHH
Q 025509          204 IATNIIRHNSLFRSM-NTILHALPGIAGKCLLKNVQQVILN  243 (251)
Q Consensus       204 v~t~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~  243 (251)
                      +.|++.......+.+ +......|    -...-++++.+..
T Consensus       226 i~T~~~~~~~~~~~~~~~~~~~~P----lgR~~~peevA~~  262 (297)
T d1d7oa_         226 LGSRAAKAIGFIDTMIEYSYNNAP----IQKTLTADEVGNA  262 (297)
T ss_dssp             CBCCCSSCCSHHHHHHHHHHHHSS----SCCCBCHHHHHHH
T ss_pred             ccchhhhhccCCHHHHHHHHhCCC----CCCCCCHHHHHHH
Confidence            999998865443332 22222222    1334567777664

>d2h7ma1 c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]

Probab=99.97  E-value=1.1e-30  Score=216.60  Aligned_cols=181  Identities=20%  Similarity=0.201  Sum_probs=147.3

Q ss_pred             CEEEEEC--CCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhc--
Q 025509            1 MDIVITG--ATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQ--   76 (251)
Q Consensus         1 k~vlItG--~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~--   76 (251)
                      |++||||  |++|||+++|++|+++|++|++++|+..+..   +++.+.. +.+...+++|+++.++++.+++.+.+.  
T Consensus         7 K~~lItGaag~~GIG~aiA~~la~~Ga~Vil~~~~~~~~~---~~~~~~~-~~~~~~~~~dv~~~~~~~~~~~~v~~~~~   82 (268)
T d2h7ma1           7 KRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLI---QRITDRL-PAKAPLLELDVQNEEHLASLAGRVTEAIG   82 (268)
T ss_dssp             CEEEECCCSSTTCHHHHHHHHHHHTTCEEEEEECSCHHHH---HHHHTTS-SSCCCEEECCTTCHHHHHHHHHHHHHHHC
T ss_pred             CEEEEECCCCCCHHHHHHHHHHHHcCCEEEEEeCChHHHH---HHHHHHc-CCceeeEeeecccccccccccchhhhccc
Confidence            7899999  4579999999999999999999999876543   3333433 566888999999999999998888654  


Q ss_pred             -CCCeeEEEEcCCCCC-------CCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccc
Q 025509           77 -HHQLNILINNAGIMG-------TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAY  148 (251)
Q Consensus        77 -~g~id~lv~~ag~~~-------~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~  148 (251)
                       ++.+|++|||+|+..       ++.+.++++|...+.+|..+.+...+...+.+.        .+.+++++|.....  
T Consensus        83 ~~~~ld~~i~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~i~~~s~~~~~--  152 (268)
T d2h7ma1          83 AGNKLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHISAYSYASMAKALLPIMN--------PGGSIVGMDFDPSR--  152 (268)
T ss_dssp             TTCCEEEEEECCCCCCGGGSTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEE--------EEEEEEEEECCCSS--
T ss_pred             cCCCcceeeecccccCccccccccccccchhhhhhhhhhhhhHHHHHHHHHhhhcc--------cccccccccccccc--
Confidence             578999999999653       234667788999999999999888887766542        23444555444333  


Q ss_pred             cCCcccccCCCCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCccc
Q 025509          149 HEGIRFDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIR  210 (251)
Q Consensus       149 ~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~  210 (251)
                                   +.|.+..|+++|+|+.+|++++++|++++|  |+||+|+||+++|+++.
T Consensus       153 -------------~~p~~~~y~~sK~a~~~ltr~lA~e~~~~g--IrVN~V~PG~v~T~~~~  199 (268)
T d2h7ma1         153 -------------AMPAYNWMTVAKSALESVNRFVAREAGKYG--VRSNLVAAGPIRTLAMS  199 (268)
T ss_dssp             -------------CCTTTHHHHHHHHHHHHHHHHHHHHHHTTT--CEEEEEEECCCCCHHHH
T ss_pred             -------------cCcccchhhccccchhhccccchhhhhccC--CcceEEecCCCCChhhh
Confidence                         667888999999999999999999999999  99999999999999875

>d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Erythromycin synthase, eryAI, 1st ketoreductase module
species: Saccharopolyspora erythraea [TaxId: 1836]

Probab=99.97  E-value=6.2e-30  Score=211.29  Aligned_cols=176  Identities=23%  Similarity=0.267  Sum_probs=144.0

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCC-EEEEEecCch---hHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhc
Q 025509            1 MDIVITGATSGIGTETARVLALRGV-HVVMGVRDIA---AGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQ   76 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~-~Vi~~~r~~~---~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~   76 (251)
                      +++|||||++|||+++|++|+++|+ +|++++|+..   ..++..+++.+.  +.++.++.+|++|.++++++++++.+.
T Consensus        10 gt~lVTGgs~GIG~a~a~~la~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~--g~~v~~~~~Dv~d~~~~~~~~~~i~~~   87 (259)
T d2fr1a1          10 GTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEAL--GARTTVAACDVTDRESVRELLGGIGDD   87 (259)
T ss_dssp             SEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTTHHHHHHHHHHT--TCEEEEEECCTTCHHHHHHHHHTSCTT
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCccCHHHHHHHHHHHHhc--cccccccccccchHHHHHHhhcccccc
Confidence            4799999999999999999999999 6899999743   455555666543  678999999999999999999987654


Q ss_pred             CCCeeEEEEcCCCCC--CCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCccc
Q 025509           77 HHQLNILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRF  154 (251)
Q Consensus        77 ~g~id~lv~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~  154 (251)
                       +++|.||||+|...  ++.++++++|+..+++|+.+++.+.+.+    ...     +.++||++||.++..        
T Consensus        88 -~~i~~vv~~ag~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~~----~~~-----~~~~iv~~SS~a~~~--------  149 (259)
T d2fr1a1          88 -VPLSAVFHAAATLDDGTVDTLTGERIERASRAKVLGARNLHELT----REL-----DLTAFVLFSSFASAF--------  149 (259)
T ss_dssp             -SCEEEEEECCCCCCCCCGGGCCHHHHHHHTHHHHHHHHHHHHHH----TTS-----CCSEEEEEEEHHHHT--------
T ss_pred             -ccccccccccccccccccccccHHHHHHHhhhhccchhHHHHHh----hcc-----CCceEeeecchhhcc--------
Confidence             58999999999764  3667889999999999999998876653    222     468999999999887        


Q ss_pred             ccCCCCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcc
Q 025509          155 DKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNII  209 (251)
Q Consensus       155 ~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~  209 (251)
                             +.++++.|+++|+++++|++.    +...|  +++++|+||.+.++.+
T Consensus       150 -------g~~~~~~YaAaka~l~~la~~----~~~~G--i~v~~I~pg~~~~~g~  191 (259)
T d2fr1a1         150 -------GAPGLGGYAPGNAYLDGLAQQ----RRSDG--LPATAVAWGTWAGSGM  191 (259)
T ss_dssp             -------CCTTCTTTHHHHHHHHHHHHH----HHHTT--CCCEEEEECCBC----
T ss_pred             -------CCcccHHHHHHHHhHHHHHHH----HHhCC--CCEEECCCCcccCCcc
Confidence                   788899999999998876654    45568  9999999999876543

>d1fjha_ c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha-hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=99.95  E-value=5e-27  Score=193.16  Aligned_cols=181  Identities=23%  Similarity=0.261  Sum_probs=130.0

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhc-CCC
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQ-HHQ   79 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~-~g~   79 (251)
                      |+||||||++|||+++|++|+++|++|++++|++.+                   ..+|+++.+..+....+...+ .+.
T Consensus         2 kVvlITGas~GIG~aiA~~la~~Ga~V~~~~~~~~~-------------------~~~d~~~~~~~~~~~~~~~~~~~~~   62 (257)
T d1fjha_           2 SIIVISGCATGIGAATRKVLEAAGHQIVGIDIRDAE-------------------VIADLSTAEGRKQAIADVLAKCSKG   62 (257)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSS-------------------EECCTTSHHHHHHHHHHHHTTCTTC
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECChHH-------------------HHHHhcCHHHHHHHHHHHHHHhCCC
Confidence            789999999999999999999999999999997532                   356999999888877666544 457


Q ss_pred             eeEEEEcCCCCCCCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCcccccc-ccCCc------
Q 025509           80 LNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLA-YHEGI------  152 (251)
Q Consensus        80 id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~-~~~~~------  152 (251)
                      +|++|+|||+..     ..+.+.....+|..+...+.+...+.+.+.     ....+.++++.....- .....      
T Consensus        63 id~lv~~Ag~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~  132 (257)
T d1fjha_          63 MDGLVLCAGLGP-----QTKVLGNVVSVNYFGATELMDAFLPALKKG-----HQPAAVVISSVASAHLAFDKNPLALALE  132 (257)
T ss_dssp             CSEEEECCCCCT-----TCSSHHHHHHHHTHHHHHHHHHHHHHHHTS-----SSCEEEEECCGGGGSSCGGGCTTHHHHH
T ss_pred             CcEEEEcCCCCC-----cHHHHHHHHHHHHHHHHHHHHHhhhhhhhh-----ccCcceeeeeccccchhhhhhhhhhhcc
Confidence            999999999643     335578889999999999999999988774     3456666665432211 00000      


Q ss_pred             -----ccccCC-CCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCC
Q 025509          153 -----RFDKIN-DPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRHN  212 (251)
Q Consensus       153 -----~~~~~~-~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~~  212 (251)
                           ....+. .....++..+|++||+|+++|+|+||.||+++|  ||||+|+||+++|++++..
T Consensus       133 ~g~~~~i~s~~~~~~~~~~~~~Y~asKaal~~ltr~lA~el~~~g--IrVN~I~PG~i~T~~~~~~  196 (257)
T d1fjha_         133 AGEEAKARAIVEHAGEQGGNLAYAGSKNALTVAVRKRAAAWGEAG--VRLNTIAPGATETPLLQAG  196 (257)
T ss_dssp             HTCHHHHHHHHHTCCTTHHHHHHHHHHHHHHHHHHHTHHHHHHTT--CEEEEEEECC---------
T ss_pred             CCcEEEEeeehhccCCCcchHHHHHHhhhhhcccccccccccccc--ccccccccCCcCChhHHhh
Confidence                 000000 001223456799999999999999999999999  9999999999999998754

>d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Escherichia coli [TaxId: 562]

Probab=99.87  E-value=5.5e-22  Score=170.36  Aligned_cols=186  Identities=15%  Similarity=0.053  Sum_probs=135.3

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchh-----HHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHh
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAA-----GKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNI   75 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~-----~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~   75 (251)
                      |+||||||+|.||++++++|+++|+.|++++|....     +........  ....++.++.+|++|.+++++.+++.  
T Consensus         2 K~vLITGatGfiGs~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~Dl~d~~~~~~~~~~~--   77 (357)
T d1db3a_           2 KVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPH--TCNPKFHLHYGDLSDTSNLTRILREV--   77 (357)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEECC-----------------------CCEEECCCCSSCHHHHHHHHHHH--
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhhHHHHHhhhh--hcCCCeEEEEeecCCHHHHHHHHhcc--
Confidence            789999999999999999999999999999985432     222221111  11457999999999999999999876  


Q ss_pred             cCCCeeEEEEcCCCCCCCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccc
Q 025509           76 QHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFD  155 (251)
Q Consensus        76 ~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~  155 (251)
                         .+|+++|+|+....  ..+.++.+..+++|+.|+.+++.++...-.+      ...++|++||...+ +.+...+  
T Consensus        78 ---~~d~v~h~aa~~~~--~~~~~~~~~~~~~Nv~gt~nllea~~~~~~~------~~~r~i~~SS~~vY-G~~~~~~--  143 (357)
T d1db3a_          78 ---QPDEVYNLGAMSHV--AVSFESPEYTADVDAMGTLRLLEAIRFLGLE------KKTRFYQASTSELY-GLVQEIP--  143 (357)
T ss_dssp             ---CCSEEEECCCCCTT--TTTTSCHHHHHHHHTHHHHHHHHHHHHTTCT------TTCEEEEEEEGGGG-TTCCSSS--
T ss_pred             ---CCCEEEEeeccccc--chhhhCHHHHHHHHHHHHHHHHHHHHHhCCC------CCcEEEEEEchhhh-CCCCCCC--
Confidence               78999999997543  2345677889999999999999887655322      24589999986543 3333333  


Q ss_pred             cCCCCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCccc
Q 025509          156 KINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIR  210 (251)
Q Consensus       156 ~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~  210 (251)
                       +++..+..+..+|+.||.+.+.+++.+++.++     +.+..+.|+.+.+|...
T Consensus       144 -~~E~~~~~P~~~Y~~sK~~~E~~~~~~~~~~~-----l~~~ilR~~~vyGp~~~  192 (357)
T d1db3a_         144 -QKETTPFYPRSPYAVAKLYAYWITVNYRESYG-----MYACNGILFNHESPRRG  192 (357)
T ss_dssp             -BCTTSCCCCCSHHHHHHHHHHHHHHHHHHHHC-----CCEEEEEECCEECTTSC
T ss_pred             -cCCCCCCCCCChHHHHHHHHHHHHHHHHHHhC-----CCEEEEEeccccCCCCC
Confidence             33334444567899999999999888887763     66667999999988543

>d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.81  E-value=3.3e-19  Score=152.04  Aligned_cols=186  Identities=18%  Similarity=0.108  Sum_probs=132.5

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchh-HHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCC
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAA-GKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQ   79 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~-~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~   79 (251)
                      |+||||||+|.||++++++|+++|++|+++++.... .......-...  ...+.++.+|++|.++++.++...     +
T Consensus         2 K~ILVTGatGfIG~~lv~~Ll~~g~~V~~~d~~~~~~~~~~~~~~~~~--~~~v~~~~~Dl~d~~~l~~~~~~~-----~   74 (347)
T d1z45a2           2 KIVLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVARLEVLT--KHHIPFYEVDLCDRKGLEKVFKEY-----K   74 (347)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTHHHHHHHHHH--TSCCCEEECCTTCHHHHHHHHHHS-----C
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCcCeEEEEECCCCcchhHHHhHHhhc--ccCCeEEEeecCCHHHHHHHHhcc-----C
Confidence            789999999999999999999999999998753221 11111111111  457899999999999999988753     7


Q ss_pred             eeEEEEcCCCCCCCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccccCCC
Q 025509           80 LNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKIND  159 (251)
Q Consensus        80 id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~  159 (251)
                      +|+|||+|+.....  ...++......+|+.++..+++++...-         ..++|++||..............++.+
T Consensus        75 ~d~VihlAa~~~~~--~~~~~~~~~~~~N~~~t~~ll~~~~~~~---------i~~~i~~SS~~vyg~~~~~~~~~~~~e  143 (347)
T d1z45a2          75 IDSVIHFAGLKAVG--ESTQIPLRYYHNNILGTVVLLELMQQYN---------VSKFVFSSSATVYGDATRFPNMIPIPE  143 (347)
T ss_dssp             CCEEEECCSCCCHH--HHHHSHHHHHHHHHHHHHHHHHHHHHHT---------CCEEEEEEEGGGGCCGGGSTTCCSBCT
T ss_pred             CCEEEEcccccccc--ccccCcccccccchhhhHHHHHHHHhcc---------cceEEeecceeeecCcccCCCCCcccc
Confidence            99999999965321  2334557788999999999998876542         348999999876544333322233444


Q ss_pred             CCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCC
Q 025509          160 PSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATN  207 (251)
Q Consensus       160 ~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~  207 (251)
                      ..+..+...|+.+|.+.+.+.+.+...... +  +.+..+.|+.+..+
T Consensus       144 ~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~-~--~~~~~lR~~~v~g~  188 (347)
T d1z45a2         144 ECPLGPTNPYGHTKYAIENILNDLYNSDKK-S--WKFAILRYFNPIGA  188 (347)
T ss_dssp             TSCCCCCSHHHHHHHHHHHHHHHHHHHSTT-S--CEEEEEEECEEECC
T ss_pred             ccCCCCCChhHhHHHHHHHHHHHHHHhhcc-C--CcEEEEeecceEee
Confidence            445555678999999999888887765433 3  56666777766544

>d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Escherichia coli [TaxId: 562]

Probab=99.80  E-value=5.2e-19  Score=150.31  Aligned_cols=184  Identities=16%  Similarity=0.057  Sum_probs=131.2

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      |+||||||+|.||++++++|+++|+.|++++|............... ....+.++++|++|.+.+.++++..     ++
T Consensus         1 MKiLItG~tGfIG~~l~~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~d~~~l~~~~~~~-----~~   74 (338)
T d1udca_           1 MRVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERL-GGKHPTFVEGDIRNEALMTEILHDH-----AI   74 (338)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTTHHHHHHHH-HTSCCEEEECCTTCHHHHHHHHHHT-----TC
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCCcchhhHHHHHhh-cCCCCEEEEeecCCHHHHHHHHhcc-----CC
Confidence            67999999999999999999999999999986322221211111111 1457999999999999999988864     69


Q ss_pred             eEEEEcCCCCCCCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccccCCCC
Q 025509           81 NILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDP  160 (251)
Q Consensus        81 d~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~  160 (251)
                      |+|||+|+....  ..+.++.++.+++|+.|+..+++++...-         ..++|++||............ .+  ..
T Consensus        75 d~ViHlAa~~~~--~~~~~~~~~~~~~Nv~gt~nlL~~~~~~~---------v~~~i~~Ss~~vy~~~~~~~~-~e--~~  140 (338)
T d1udca_          75 DTVIHFAGLKAV--GESVQKPLEYYDNNVNGTLRLISAMRAAN---------VKNFIFSSSATVYGDQPKIPY-VE--SF  140 (338)
T ss_dssp             SEEEECCSCCCH--HHHHHCHHHHHHHHHHHHHHHHHHHHHHT---------CCEEEEEEEGGGGCSCCSSSB-CT--TS
T ss_pred             CEEEECCCccch--hhHHhCHHHHHHhHHHHHHHHHHHHHHhC---------CCEEEecCcceEEcccccccc-cc--cc
Confidence            999999985321  22345677899999999999988877652         348999998765432222111 11  11


Q ss_pred             CCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCc
Q 025509          161 SGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNI  208 (251)
Q Consensus       161 ~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~  208 (251)
                      ....+...|+.+|.+.+.+.+....+..  +  +.+..+.|+.+.++.
T Consensus       141 ~~~~p~~~Y~~sK~~~e~~~~~~~~~~~--~--~~~~ilR~~~v~G~~  184 (338)
T d1udca_         141 PTGTPQSPYGKSKLMVEQILTDLQKAQP--D--WSIALLRYFNPVGAH  184 (338)
T ss_dssp             CCCCCSSHHHHHHHHHHHHHHHHHHHST--T--CEEEEEEECEEECCC
T ss_pred             ccCCCcchHHHHHhhhhHHHHHHHhhcc--C--CeEEEEeeccEEecc
Confidence            1223466899999999988887776653  3  566668888888764

>d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.78  E-value=2.4e-18  Score=146.19  Aligned_cols=186  Identities=14%  Similarity=0.053  Sum_probs=132.2

Q ss_pred             CEE-EEECCCChhHHHHHHHHHHcCCEEEEEecCchh-----HHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHH
Q 025509            1 MDI-VITGATSGIGTETARVLALRGVHVVMGVRDIAA-----GKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYN   74 (251)
Q Consensus         1 k~v-lItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~-----~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~   74 (251)
                      |.| |||||+|.||++++++|.++|++|+.++|....     ++......... ...++.++.+|++|.+.+.+++++. 
T Consensus         1 kKI~LVTG~tGfIG~~l~~~Ll~~g~~V~~i~r~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~d~~~~~~~~~~~-   78 (347)
T d1t2aa_           1 RNVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAH-IEGNMKLHYGDLTDSTCLVKIINEV-   78 (347)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTGGGC----------CEEEEECCTTCHHHHHHHHHHH-
T ss_pred             CCEEEEecCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhhHHHHhhchhhh-ccCCcEEEEeecCCchhhHHHHhhc-
Confidence            456 999999999999999999999999999985431     12211111111 1356899999999999999999875 


Q ss_pred             hcCCCeeEEEEcCCCCCCCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCccc
Q 025509           75 IQHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRF  154 (251)
Q Consensus        75 ~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~  154 (251)
                          .+++++|.++...  ...+.+.....+++|+.|+..++.++..+...      ...++|++||.+.. +.+...++
T Consensus        79 ----~~~~v~~~~a~~~--~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~~~------~~~~~i~~SS~~vy-g~~~~~~~  145 (347)
T d1t2aa_          79 ----KPTEIYNLGAQSH--VKISFDLAEYTADVDGVGTLRLLDAVKTCGLI------NSVKFYQASTSELY-GKVQEIPQ  145 (347)
T ss_dssp             ----CCSEEEECCSCCC--HHHHHHSHHHHHHHHTHHHHHHHHHHHHTTCT------TTCEEEEEEEGGGT-CSCSSSSB
T ss_pred             ----ccceeeeeeeccc--cchhhccchhhhhhHHHHHHHHHHHHHHcCCC------CCcEEEEecchhee-cCCCCCCC
Confidence                6889999987532  22344556777899999999998887665332      23589999986543 33333333


Q ss_pred             ccCCCCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcc
Q 025509          155 DKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNII  209 (251)
Q Consensus       155 ~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~  209 (251)
                         ++..+..+..+|+.||.+.+.+++.++..+.     +.+..+.|+.+..|-.
T Consensus       146 ---~E~~~~~P~~~Yg~sK~~aE~~~~~~~~~~~-----~~~~ilr~~~vyGp~~  192 (347)
T d1t2aa_         146 ---KETTPFYPRSPYGAAKLYAYWIVVNFREAYN-----LFAVNGILFNHESPRR  192 (347)
T ss_dssp             ---CTTSCCCCCSHHHHHHHHHHHHHHHHHHHHC-----CEEEEEEECCEECTTS
T ss_pred             ---CCCCCCCCCCHHHHHHHHHHHHHHHHHHHhC-----CCEEEEEecceeCCCC
Confidence               3344455567899999999999888877653     6666789988888743

>d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

Probab=99.77  E-value=1.2e-18  Score=149.64  Aligned_cols=197  Identities=15%  Similarity=0.076  Sum_probs=136.3

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEE-EEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCC
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVV-MGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQ   79 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi-~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~   79 (251)
                      |+||||||+|.||++++++|++.|++|+ ++++.... .. .+.+.......++.++.+|++|.+.+.++++..     .
T Consensus         1 MkILItG~tGfIGs~l~~~L~~~g~~vv~~~d~~~~~-~~-~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~-----~   73 (361)
T d1kewa_           1 MKILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYA-GN-LESLSDISESNRYNFEHADICDSAEITRIFEQY-----Q   73 (361)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHHCSCEEEEEECCCTT-CC-GGGGTTTTTCTTEEEEECCTTCHHHHHHHHHHH-----C
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCCcc-cc-HHHHHhhhhcCCcEEEEccCCCHHHHHHHHHhC-----C
Confidence            6899999999999999999999999754 44432211 00 111212222457999999999999999988864     7


Q ss_pred             eeEEEEcCCCCCCCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCC-----ccc
Q 025509           80 LNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEG-----IRF  154 (251)
Q Consensus        80 id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~-----~~~  154 (251)
                      +|+|||+|+....  ..+.++....+++|+.|+..+++++...............++|++||..........     ...
T Consensus        74 ~d~VihlAa~~~~--~~~~~~p~~~~~~N~~gt~nl~~~~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~~~  151 (361)
T d1kewa_          74 PDAVMHLAAESHV--DRSITGPAAFIETNIVGTYALLEVARKYWSALGEDKKNNFRFHHISTDEVYGDLPHPDEVENSVT  151 (361)
T ss_dssp             CSEEEECCSCCCH--HHHHHCTHHHHHHHTHHHHHHHHHHHHHHHTSCHHHHHHCEEEEEEEGGGGCCCCCGGGSCTTSC
T ss_pred             CCEEEECccccch--hhHHhCHHHHHHHHHHHHHHHHHHHHHhhhhhhhcccCceEEEEeccceeeCCCccCCccccccC
Confidence            9999999986432  224456778899999999999999988754310000023589999997755422111     001


Q ss_pred             ccCC-CCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccC
Q 025509          155 DKIN-DPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  211 (251)
Q Consensus       155 ~~~~-~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  211 (251)
                      .+.. +..+..+...|+.+|.+.+.+++.++..++     +.+..+.|+.|..|....
T Consensus       152 ~~~~~e~~~~~p~s~Yg~sK~~~E~~~~~~~~~~~-----i~~~~lR~~~vyGp~~~~  204 (361)
T d1kewa_         152 LPLFTETTAYAPSSPYSASKASSDHLVRAWRRTYG-----LPTIVTNCSNNYGPYHFP  204 (361)
T ss_dssp             CCCBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHHC-----CCEEEEEECEEESTTCCT
T ss_pred             CCCcccCCCCCCCCHHHHHHHHHHHHHHHHHHHhC-----CCEEEEecCceECcCCCc
Confidence            1111 122334556899999999999998887663     677779999999886543

>d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.77  E-value=1.8e-17  Score=140.25  Aligned_cols=188  Identities=14%  Similarity=0.039  Sum_probs=133.7

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCch-----hHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHh
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIA-----AGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNI   75 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~-----~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~   75 (251)
                      |++|||||+|.||++++++|+++|++|+.++|...     +.......... .....+.++.+|+++.+++.+.++..  
T Consensus         2 k~~LVTGatGfiG~~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~Di~~~~~~~~~~~~~--   78 (339)
T d1n7ha_           2 KIALITGITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNTQRINHIYIDPHN-VNKALMKLHYADLTDASSLRRWIDVI--   78 (339)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTTTTC---------CCEEEEECCTTCHHHHHHHHHHH--
T ss_pred             CEEEEeCCccHHHHHHHHHHHHCcCEEEEEECCCcccchhhhhhhhhhhhh-ccccceEEEEccccCHHHHHHHHhhh--
Confidence            78999999999999999999999999999998532     21111111111 11456889999999999999988864  


Q ss_pred             cCCCeeEEEEcCCCCCCCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccc
Q 025509           76 QHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFD  155 (251)
Q Consensus        76 ~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~  155 (251)
                         ++|+|||+|+....  ..+.++....++.|+.++..++.++........    ...+++..||... ... ....  
T Consensus        79 ---~~D~Vih~Aa~~~~--~~~~~~p~~~~~~n~~~~~~~~~~~~~~~~~~~----~~~~~~~~ss~~~-~~~-~~~~--  145 (339)
T d1n7ha_          79 ---KPDEVYNLAAQSHV--AVSFEIPDYTADVVATGALRLLEAVRSHTIDSG----RTVKYYQAGSSEM-FGS-TPPP--  145 (339)
T ss_dssp             ---CCSEEEECCSCCCH--HHHHHSHHHHHHHHTHHHHHHHHHHHHHHHHHC----CCCEEEEEEEGGG-GTT-SCSS--
T ss_pred             ---ccchhhhccccccc--cccccCccccccccccccchhhhhhhhcccccc----cceeeeeccccee-ccc-CCCC--
Confidence               79999999986432  224456778899999999999999877765531    2335555555432 221 1112  


Q ss_pred             cCCCCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCccc
Q 025509          156 KINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIR  210 (251)
Q Consensus       156 ~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~  210 (251)
                       .++..+..+...|+.+|.+.+.++...+..+   |  +.+..+.|+.|..|...
T Consensus       146 -~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~--~~~~ilR~~~vyGp~~~  194 (339)
T d1n7ha_         146 -QSETTPFHPRSPYAASKCAAHWYTVNYREAY---G--LFACNGILFNHESPRRG  194 (339)
T ss_dssp             -BCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH---C--CEEEEEEECCEECTTSC
T ss_pred             -CCCCCCCCCcchhhHHHHHHHHHHHHHHHHh---C--CCEEEEEEccccCCCCC
Confidence             2334455567799999999998888877765   3  77888999999988644

>d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Aldehyde reductase II
species: Sporobolomyces salmonicolor [TaxId: 5005]

Probab=99.76  E-value=3.9e-18  Score=145.11  Aligned_cols=187  Identities=17%  Similarity=0.129  Sum_probs=133.6

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      |+||||||+|.||++++++|+++|++|+.+.|+..+...................+..|+++.+++..++.       .+
T Consensus        12 k~VlVTG~sGfIGs~l~~~Ll~~G~~V~~~vR~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------~~   84 (342)
T d1y1pa1          12 SLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKYPGRFETAVVEDMLKQGAYDEVIK-------GA   84 (342)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHSTTTEEEEECSCTTSTTTTTTTTT-------TC
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCcCEEEEEeCCchhHHHHHHhhhccccccccEEEeccccchhhhhhhcc-------cc
Confidence            68999999999999999999999999999999987766655544334434455667789999887765443       68


Q ss_pred             eEEEEcCCCCCCCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccC---Ccccc--
Q 025509           81 NILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHE---GIRFD--  155 (251)
Q Consensus        81 d~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~---~~~~~--  155 (251)
                      |+++|+++....     .......+..|+.|+..+++++...-        .-.++|++||..+......   ....+  
T Consensus        85 ~~v~~~a~~~~~-----~~~~~~~~~~nv~gt~~ll~~~~~~~--------~v~~~i~~SS~~~~~~~~~~~~~~~~~e~  151 (342)
T d1y1pa1          85 AGVAHIASVVSF-----SNKYDEVVTPAIGGTLNALRAAAATP--------SVKRFVLTSSTVSALIPKPNVEGIYLDEK  151 (342)
T ss_dssp             SEEEECCCCCSC-----CSCHHHHHHHHHHHHHHHHHHHHTCT--------TCCEEEEECCGGGTCCCCTTCCCCEECTT
T ss_pred             hhhhhhcccccc-----cccccccccchhhhHHHHHHhhhccc--------ccccccccccceeeccCCCCCCCcccccc
Confidence            999999986431     12345678889999988888765531        2468999999765432211   11100  


Q ss_pred             -----------cCCCCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCccc
Q 025509          156 -----------KINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIR  210 (251)
Q Consensus       156 -----------~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~  210 (251)
                                 ......+..+..+|+.+|.+.+.+++.+++.... +  +++..++|+.+..|...
T Consensus       152 ~~~~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~-~--~~~~~i~p~~v~Gp~~~  214 (342)
T d1y1pa1         152 SWNLESIDKAKTLPESDPQKSLWVYAASKTEAELAAWKFMDENKP-H--FTLNAVLPNYTIGTIFD  214 (342)
T ss_dssp             CCCHHHHHHHHHSCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHCC-S--SEEEEEEESEEECCCSC
T ss_pred             ccccccccccccccccCCCCCcCcccchhHhHHHHHHHhhhhccc-c--cccceecccceeCCCCC
Confidence                       1122233445568999999999999988887653 3  77778999998877544

>d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin dehydrogenase {Methylobacterium extorquens [TaxId: 408]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylene-tetrahydromethanopterin dehydrogenase
species: Methylobacterium extorquens [TaxId: 408]

Probab=99.76  E-value=1.4e-20  Score=147.94  Aligned_cols=107  Identities=17%  Similarity=0.207  Sum_probs=89.7

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      |++|||||++|||+++|+.|+++|++|++++|+.+++++..+++.+..   .+.+..+|+++.+++++.+       +++
T Consensus        24 K~vlItGasgGIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~---~~~~~~~d~~~~~~~~~~~-------~~i   93 (191)
T d1luaa1          24 KKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKRF---KVNVTAAETADDASRAEAV-------KGA   93 (191)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHH---TCCCEEEECCSHHHHHHHT-------TTC
T ss_pred             CEEEEECCCHHHHHHHHHHHHhhccchhhcccchHHHHHHHHHHHhcc---chhhhhhhcccHHHHHHHh-------cCc
Confidence            789999999999999999999999999999999999999998887643   4567889999999888754       478


Q ss_pred             eEEEEcCCCCCCCCcCCchhhHHHHHHHHHHHHHHHHHH
Q 025509           81 NILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLL  119 (251)
Q Consensus        81 d~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~  119 (251)
                      |+||||||+.  +..++.++|+..+++|+.+.+.....+
T Consensus        94 Dilin~Ag~g--~~~~~~e~~~~~~~~nv~~~~~~~~~~  130 (191)
T d1luaa1          94 HFVFTAGAIG--LELLPQAAWQNESSIEIVADYNAQPPL  130 (191)
T ss_dssp             SEEEECCCTT--CCCBCHHHHHTCTTCCEEEECCCSSSC
T ss_pred             CeeeecCccc--cccCCHHHHHhhhcceeehhHhhHHHH
Confidence            9999999963  334678899999999887766544433

>d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sulfolipid biosynthesis protein SQD1
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.76  E-value=1.5e-17  Score=143.92  Aligned_cols=191  Identities=12%  Similarity=0.089  Sum_probs=131.2

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCc----------------hhHHHHHHHHHhhCCCCceEEEEecCCCHH
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDI----------------AAGKDVKETIVKEIPSAKVDAMELDLSSLA   64 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~----------------~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~   64 (251)
                      |+||||||+|.||.+++++|+++|+.|++++--.                ....+......... +.++.++.+|++|.+
T Consensus         2 ~kILVTGatGfiG~~lv~~Ll~~g~~V~~iDnl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~i~~~~~Dl~d~~   80 (393)
T d1i24a_           2 SRVMVIGGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKALT-GKSIELYVGDICDFE   80 (393)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHHHHHH-CCCCEEEESCTTSHH
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCcCEEEEEecCCcccccccccccccccccchHHHHHHHHhhc-CCCcEEEEccCCCHH
Confidence            6899999999999999999999999999986210                11112222222211 457999999999999


Q ss_pred             HHHHHHHHHHhcCCCeeEEEEcCCCCCC-CCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCcc
Q 025509           65 SVRNFASEYNIQHHQLNILINNAGIMGT-PFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEG  143 (251)
Q Consensus        65 ~i~~~~~~~~~~~g~id~lv~~ag~~~~-~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~  143 (251)
                      .++++++..     ++|+|+|.|+.... ......+.....+++|+.|+..++.++...-.        ..++++.||..
T Consensus        81 ~l~~~~~~~-----~~d~ViHlAa~~~~~~s~~~~~~~~~~~~~Nv~gt~nll~~~~~~~~--------~~~~i~~ss~~  147 (393)
T d1i24a_          81 FLAESFKSF-----EPDSVVHFGEQRSAPYSMIDRSRAVYTQHNNVIGTLNVLFAIKEFGE--------ECHLVKLGTMG  147 (393)
T ss_dssp             HHHHHHHHH-----CCSEEEECCSCCCHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHHCT--------TCEEEEECCGG
T ss_pred             HHHHHHHhh-----cchheeccccccccccccccccccccccccccccccHHHHHHHHhcc--------ccceeeccccc
Confidence            999999875     79999999986543 22234456677899999999999988766532        23666666654


Q ss_pred             ccccccCCc--ccccC-------CCCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCccc
Q 025509          144 HRLAYHEGI--RFDKI-------NDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIR  210 (251)
Q Consensus       144 ~~~~~~~~~--~~~~~-------~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~  210 (251)
                      .........  .+.+.       ..+.+..+...|+.+|.+.+.+++.++.++.     +.+..+.|+.+..+...
T Consensus       148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~Y~~sK~~aE~~~~~~~~~~~-----l~~~~lR~~~v~G~~~~  218 (393)
T d1i24a_         148 EYGTPNIDIEEGYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAWG-----IRATDLNQGVVYGVKTD  218 (393)
T ss_dssp             GGCCCSSCBCSSEEEEEETTEEEEEECCCCCCSHHHHHHHHHHHHHHHHHHHHC-----CEEEEEEECEEECSCCT
T ss_pred             cccccccccccccccccccccccccccccccccHHHHHhhhhcccccccccccc-----eeeeecccccccCCCcc
Confidence            432111110  00000       0111233445799999999999988777664     77778999988877543

>d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.74  E-value=3.1e-17  Score=137.77  Aligned_cols=184  Identities=15%  Similarity=0.048  Sum_probs=131.4

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      |+||||||+|.||++++++|+++|++|+.++|......  ...+.+.....++.++.+|++|.+.+.+.+...     ..
T Consensus         1 k~vLItG~tGfiG~~l~~~Ll~~g~~V~~~~r~~~~~~--~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~-----~~   73 (321)
T d1rpna_           1 RSALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDT--RWRLRELGIEGDIQYEDGDMADACSVQRAVIKA-----QP   73 (321)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCC--CHHHHHTTCGGGEEEEECCTTCHHHHHHHHHHH-----CC
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCCccc--HHHHHHhcccCCcEEEEccccChHHhhhhhccc-----cc
Confidence            78999999999999999999999999999998643211  111222222457899999999999999888875     67


Q ss_pred             eEEEEcCCCCCCCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccccCCCC
Q 025509           81 NILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDP  160 (251)
Q Consensus        81 d~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~  160 (251)
                      ++++++|+....  ....++....++.|+.++..++.++...-.        ..++++.||.. ..+......+   ++.
T Consensus        74 ~~~~~~a~~~~~--~~~~~~~~~~~~~n~~g~~~~l~~~~~~~~--------~~~~i~~Ss~~-~~~~~~~~~~---~E~  139 (321)
T d1rpna_          74 QEVYNLAAQSFV--GASWNQPVTTGVVDGLGVTHLLEAIRQFSP--------ETRFYQASTSE-MFGLIQAERQ---DEN  139 (321)
T ss_dssp             SEEEECCSCCCH--HHHTTSHHHHHHHHTHHHHHHHHHHHHHCT--------TSEEEEEEEGG-GGCSCSSSSB---CTT
T ss_pred             cccccccccccc--cccccchHHHHhhhhhchHHHHHHHHHhCC--------Ccccccccchh-hcCcccCCCC---CCC
Confidence            788888875332  123345678899999999998888766532        23566666543 4333333232   233


Q ss_pred             CCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCccc
Q 025509          161 SGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIR  210 (251)
Q Consensus       161 ~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~  210 (251)
                      .+......|+.+|.+.+.+++.++.++.     +.+..+.|+.+..|...
T Consensus       140 ~~~~p~~~Y~~sK~~~E~~~~~~~~~~~-----~~~~~lr~~~vyGp~~~  184 (321)
T d1rpna_         140 TPFYPRSPYGVAKLYGHWITVNYRESFG-----LHASSGILFNHESPLRG  184 (321)
T ss_dssp             SCCCCCSHHHHHHHHHHHHHHHHHHHHC-----CCEEEEEECCEECTTSC
T ss_pred             CCccccChhHHHHHHHHHHHHHHHhhcC-----CcEEEEEEecccCCCcc
Confidence            3445567899999999998888887764     56667889888887644

>d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-N-acetylglucosamine 4-epimerase WbpP
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.71  E-value=1.8e-16  Score=134.41  Aligned_cols=184  Identities=16%  Similarity=0.071  Sum_probs=129.8

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHH---HHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcC
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDV---KETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQH   77 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~---~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~   77 (251)
                      |++|||||+|.||++++++|.+.|++|++++|....-...   ...+........+.++.+|..|.........      
T Consensus        17 k~iLVTG~tGfIGs~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~------   90 (341)
T d1sb8a_          17 KVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQGDIRNLDDCNNACA------   90 (341)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHSCHHHHTTEEEEECCTTSHHHHHHHHT------
T ss_pred             CEEEEecCCCHHHHHHHHHHHHCcCEEEEEECCCCcchhhHHHHHHhhhhcccCCeeEEeeccccccccccccc------
Confidence            6899999999999999999999999999998632211111   1111111112468999999999877654322      


Q ss_pred             CCeeEEEEcCCCCCCCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccccC
Q 025509           78 HQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKI  157 (251)
Q Consensus        78 g~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~  157 (251)
                       ..+.++|.++....  ..+.++....+++|+.|+..+++++...         +..++|++||..... ...+.+.   
T Consensus        91 -~~~~v~~~~a~~~~--~~~~~~~~~~~~~Nv~gt~~ll~~~~~~---------~~~~~i~~SS~~vyg-~~~~~~~---  154 (341)
T d1sb8a_          91 -GVDYVLHQAALGSV--PRSINDPITSNATNIDGFLNMLIAARDA---------KVQSFTYAASSSTYG-DHPGLPK---  154 (341)
T ss_dssp             -TCSEEEECCSCCCH--HHHHHCHHHHHHHHTHHHHHHHHHHHHT---------TCSEEEEEEEGGGGT-TCCCSSB---
T ss_pred             -cccccccccccccc--cccccCccchhheeehhHHHHHHHHHhc---------CCceEEEcccceeeC-CCCCCCc---
Confidence             67888888875322  2245677889999999999998887554         235899999877543 2233333   


Q ss_pred             CCCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccC
Q 025509          158 NDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  211 (251)
Q Consensus       158 ~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  211 (251)
                      +++.+..+...|+.+|.+.+.+++.+++...     +++..+.|+.+.++....
T Consensus       155 ~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~-----i~~~ilR~~~v~G~~~~~  203 (341)
T d1sb8a_         155 VEDTIGKPLSPYAVTKYVNELYADVFSRCYG-----FSTIGLRYFNVFGRRQDP  203 (341)
T ss_dssp             CTTCCCCCCSHHHHHHHHHHHHHHHHHHHHC-----CCCEEEEECCEECTTCCC
T ss_pred             cCCCCCCCCCcchHHHHHHHHHHHHHHHHhC-----CCeEEEEeceeeccCcCC
Confidence            3334445567999999999999998887664     566669999888776543

>d1ek6a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.70  E-value=1.8e-16  Score=134.62  Aligned_cols=183  Identities=15%  Similarity=0.043  Sum_probs=125.8

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecC------chhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHH
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRD------IAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYN   74 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~------~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~   74 (251)
                      |+||||||+|.||++++++|++.|++|+++++.      .....+..+.+... ...++.++.+|++|.+.+++.+... 
T Consensus         3 kKILITG~tGfIGs~lv~~Ll~~g~~V~~ld~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~d~~~l~~~~~~~-   80 (346)
T d1ek6a_           3 EKVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQEL-TGRSVEFEEMDILDQGALQRLFKKY-   80 (346)
T ss_dssp             SEEEEETTTSHHHHHHHHHHHHTTCCEEEEECSSSSCBCSSSSBHHHHHHHHH-HTCCCEEEECCTTCHHHHHHHHHHC-
T ss_pred             CeEEEECCCcHHHHHHHHHHHHCcCEEEEEECCCccccccccchHHHHHHHHh-cCCCcEEEEeecccccccccccccc-
Confidence            579999999999999999999999999988641      11112222222221 1567999999999999999887753 


Q ss_pred             hcCCCeeEEEEcCCCCCCCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCccc
Q 025509           75 IQHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRF  154 (251)
Q Consensus        75 ~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~  154 (251)
                          .+++++|.|+....  ..+.++..+.+++|+.++..+++++...         .-.+++++||.............
T Consensus        81 ----~~~~i~h~Aa~~~~--~~~~~~p~~~~~~Nv~gt~~l~~~~~~~---------~v~~~i~~ss~~~~~~~~~~~~~  145 (346)
T d1ek6a_          81 ----SFMAVIHFAGLKAV--GESVQKPLDYYRVNLTGTIQLLEIMKAH---------GVKNLVFSSSATVYGNPQYLPLD  145 (346)
T ss_dssp             ----CEEEEEECCSCCCH--HHHHHCHHHHHHHHHHHHHHHHHHHHHT---------TCCEEEEEEEGGGGCSCSSSSBC
T ss_pred             ----ccccccccccccCc--HhhHhCHHHHHHhhhcccccccchhhhc---------Ccccccccccceeeecccccccc
Confidence                78999999996442  2234556788999999999888876543         23478988887655432211111


Q ss_pred             ccCCCCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCC
Q 025509          155 DKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATN  207 (251)
Q Consensus       155 ~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~  207 (251)
                         ..........+|+.+|.+.+...+.++...  .+  +....+.|+.+.++
T Consensus       146 ---~~~~~~~~~~~Y~~~k~~~e~~~~~~~~~~--~~--~~~~~lR~~~v~G~  191 (346)
T d1ek6a_         146 ---EAHPTGGCTNPYGKSKFFIEEMIRDLCQAD--KT--WNAVLLRYFNPTGA  191 (346)
T ss_dssp             ---TTSCCCCCSSHHHHHHHHHHHHHHHHHHHC--TT--CEEEEEEECEEECC
T ss_pred             ---ccccccccCChHHHHHHHHHHHHHHHHHhc--cC--CceEEEeecceecc
Confidence               111122234579999999988877765532  24  56666888877765

>d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase)
species: Escherichia coli [TaxId: 562]

Probab=99.70  E-value=2.3e-16  Score=132.07  Aligned_cols=167  Identities=15%  Similarity=0.104  Sum_probs=123.0

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      |+||||||+|.||++++++|+++|+.|+++++..                      .+|+.+.+.+..+++..     .+
T Consensus         3 kkIlITG~tGfiG~~l~~~L~~~g~~vi~~~~~~----------------------~~~~~~~~~~~~~~~~~-----~~   55 (315)
T d1e6ua_           3 QRVFIAGHRGMVGSAIRRQLEQRGDVELVLRTRD----------------------ELNLLDSRAVHDFFASE-----RI   55 (315)
T ss_dssp             EEEEEETTTSHHHHHHHHHHTTCTTEEEECCCTT----------------------TCCTTCHHHHHHHHHHH-----CC
T ss_pred             CEEEEEcCCcHHHHHHHHHHHHCcCEEEEecCch----------------------hccccCHHHHHHHHhhc-----CC
Confidence            5799999999999999999999999887765432                      15899999999887753     68


Q ss_pred             eEEEEcCCCCCCCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccccCC--
Q 025509           81 NILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKIN--  158 (251)
Q Consensus        81 d~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~--  158 (251)
                      |.++|+|+.... ......+..+.+++|+.++..++.++..+-         -.++|++||.+.... ....++++-.  
T Consensus        56 d~v~~~a~~~~~-~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~---------v~~~i~~SS~~vyg~-~~~~~~~E~~~~  124 (315)
T d1e6ua_          56 DQVYLAAAKVGG-IVANNTYPADFIYQNMMIESNIIHAAHQND---------VNKLLFLGSSCIYPK-LAKQPMAESELL  124 (315)
T ss_dssp             SEEEECCCCCCC-HHHHHHCHHHHHHHHHHHHHHHHHHHHHTT---------CCEEEEECCGGGSCT-TCCSSBCGGGTT
T ss_pred             CEEEEcchhccc-cccchhhHHHHHHHHHHHHHHHHHHHHHcC---------CCEEEEECCceEcCC-CCCCCccCCccc
Confidence            999999975432 112344556778999999999888775542         348999999776542 2222332211  


Q ss_pred             CCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCccc
Q 025509          159 DPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIR  210 (251)
Q Consensus       159 ~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~  210 (251)
                      ...+.+...+|+.+|.+.+.+++.+.++.   |  +++..+.|+.|..|...
T Consensus       125 ~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---g--l~~~ilR~~~vyGp~~~  171 (315)
T d1e6ua_         125 QGTLEPTNEPYAIAKIAGIKLCESYNRQY---G--RDYRSVMPTNLYGPHDN  171 (315)
T ss_dssp             SSCCCGGGHHHHHHHHHHHHHHHHHHHHH---C--CEEEEEEECEEESTTCC
T ss_pred             cCCCCCCCCHHHHHHHHHHHHHHHHHHHh---C--CCEEEEeeccEECCCCC
Confidence            11233345679999999999999988776   4  77888999999987644

>d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-tyvelose-2-epimerase
species: Salmonella typhi [TaxId: 90370]

Probab=99.69  E-value=1.7e-15  Score=127.30  Aligned_cols=169  Identities=17%  Similarity=0.142  Sum_probs=118.8

Q ss_pred             EEEEECCCChhHHHHHHHHHHcCCEEEEEecC-chhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            2 DIVITGATSGIGTETARVLALRGVHVVMGVRD-IAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         2 ~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~-~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      +||||||+|.||++++++|+++|++|+++++- .....+..+.+..   ..++.++.+|+++.+++.++++..     ++
T Consensus         2 KILVTGatGfIGs~lv~~Ll~~g~~V~~id~~~~~~~~~~~~~~~~---~~~~~~i~~Di~~~~~l~~~~~~~-----~~   73 (338)
T d1orra_           2 KLLITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNLHWLSS---LGNFEFVHGDIRNKNDVTRLITKY-----MP   73 (338)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSTTHHHHHHHHHT---TCCCEEEECCTTCHHHHHHHHHHH-----CC
T ss_pred             EEEEECCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhHHHHhhc---cCCcEEEEcccCCHHHHHHHHHhc-----CC
Confidence            58999999999999999999999999988742 2222222222322   357899999999999999988865     68


Q ss_pred             eEEEEcCCCCCCCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccc-----
Q 025509           81 NILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFD-----  155 (251)
Q Consensus        81 d~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~-----  155 (251)
                      |+|||+|+....  ....++.+..+++|+.|+.++++++...-         ..+.+++||...........+..     
T Consensus        74 d~Vih~aa~~~~--~~~~~~~~~~~~~Nv~gt~nll~~~~~~~---------~~~~i~~sS~~~~~~~~~~~~~~~~~~~  142 (338)
T d1orra_          74 DSCFHLAGQVAM--TTSIDNPCMDFEINVGGTLNLLEAVRQYN---------SNCNIIYSSTNKVYGDLEQYKYNETETR  142 (338)
T ss_dssp             SEEEECCCCCCH--HHHHHCHHHHHHHHHHHHHHHHHHHHHHC---------TTCEEEEEEEGGGGTTCTTSCEEECSSC
T ss_pred             ceEEeecccccc--cccccChHHHHHHHHHHHHHHHHhhhccc---------cccccccccccccccccccccccccccc
Confidence            999999986432  12334667889999999999998766542         34566666655544332211110     


Q ss_pred             --------cCCCCCCCCcccccchhHHHHHHHHHHHHHHhcc
Q 025509          156 --------KINDPSGYNGFRAYSQSKLANILHANELARRLKE  189 (251)
Q Consensus       156 --------~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~  189 (251)
                              ......+..+...|+.+|...+.+.......+..
T Consensus       143 ~~~~~~~~~~~~~~~~~~~~~y~~~k~~~e~~~~~~~~~~~~  184 (338)
T d1orra_         143 YTCVDKPNGYDESTQLDFHSPYGCSKGAADQYMLDYARIFGL  184 (338)
T ss_dssp             EEETTCTTCBCTTSCCCCCHHHHHHHHHHHHHHHHHHHHHCC
T ss_pred             ccccccccCcccCCccccccccccccchhhhhhhhhhhccCc
Confidence                    1111223345678999999999988888887754

>d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-glucose-4,6-dehydratase
species: Yersinia pseudotuberculosis [TaxId: 633]

Probab=99.69  E-value=2.8e-16  Score=133.57  Aligned_cols=186  Identities=18%  Similarity=0.132  Sum_probs=132.8

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      |+||||||+|.||+++++.|+++|++|++++|+..+.....+...   -...+.++.+|++|++.+.++++..     .+
T Consensus         9 KkILVTG~tGfIGs~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~---~~~~i~~~~~Dl~d~~~l~~~~~~~-----~~   80 (356)
T d1rkxa_           9 KRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETAR---VADGMQSEIGDIRDQNKLLESIREF-----QP   80 (356)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCSSSSCHHHHTT---TTTTSEEEECCTTCHHHHHHHHHHH-----CC
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCccHHHHhhhh---cccCCeEEEeeccChHhhhhhhhhc-----hh
Confidence            689999999999999999999999999999998765444332221   1346999999999999999988865     78


Q ss_pred             eEEEEcCCCCCCCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccccCCCC
Q 025509           81 NILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDP  160 (251)
Q Consensus        81 d~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~  160 (251)
                      |+++|.|+....  ..+.+..+..+++|+.++..+++++...-        ....++..|| .........  ..+....
T Consensus        81 ~~v~~~aa~~~~--~~~~~~~~~~~~~Nv~g~~n~l~~~~~~~--------~~~~~~~~s~-~~~~~~~~~--~~~~~~~  147 (356)
T d1rkxa_          81 EIVFHMAAQPLV--RLSYSEPVETYSTNVMGTVYLLEAIRHVG--------GVKAVVNITS-DKCYDNKEW--IWGYREN  147 (356)
T ss_dssp             SEEEECCSCCCH--HHHHHCHHHHHHHHTHHHHHHHHHHHHHC--------CCCEEEEECC-GGGBCCCCS--SSCBCTT
T ss_pred             hhhhhhhccccc--cccccCCccccccccccchhhhhhhhccc--------cccccccccc-ccccccccc--ccccccc
Confidence            999999986332  23456678899999999999888876542        1234444444 333322111  1112222


Q ss_pred             CCCCcccccchhHHHHHHHHHHHHHHhcc------CCCcEEEEEeeCCcccCCcc
Q 025509          161 SGYNGFRAYSQSKLANILHANELARRLKE------DGVDITANSVHPGAIATNII  209 (251)
Q Consensus       161 ~~~~~~~~Y~~sK~a~~~~~~~la~e~~~------~g~~i~v~~v~Pg~v~t~~~  209 (251)
                      .+..+...|+.+|.+.+.+++..+.++.-      .+  +.+..+.|+.+..|..
T Consensus       148 ~~~~p~~~y~~~k~~~e~~~~~~~~~~~~~~~~~~~~--~~~~~~r~~~vyGp~~  200 (356)
T d1rkxa_         148 EAMGGYDPYSNSKGCAELVTSSYRNSFFNPANYGQHG--TAVATVRAGNVIGGGD  200 (356)
T ss_dssp             SCBCCSSHHHHHHHHHHHHHHHHHHHHSCGGGHHHHC--CEEEEEECCCEECTTC
T ss_pred             cccCCCCccccccccchhhhhHHhhhcccchhccccC--ceEEeccCCCeeCCCc
Confidence            23445568999999999999888876532      34  6777899998887653

>d2blla1 c.2.1.2 (A:316-657) Polymyxin resistance protein ArnA (PrmI) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Polymyxin resistance protein ArnA (PrmI)
species: Escherichia coli [TaxId: 562]

Probab=99.69  E-value=3.6e-16  Score=132.43  Aligned_cols=178  Identities=14%  Similarity=0.011  Sum_probs=124.6

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCC-EEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCC
Q 025509            1 MDIVITGATSGIGTETARVLALRGV-HVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQ   79 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~   79 (251)
                      |+||||||+|.||++++++|+++|+ +|+++++......+..       ...++.++.+|+++.+++.+.+.+      +
T Consensus         1 MKILITG~tGfiG~~l~~~Ll~~g~~~V~~ld~~~~~~~~~~-------~~~~~~~i~~Di~~~~~~~~~~~~------~   67 (342)
T d2blla1           1 MRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFL-------NHPHFHFVEGDISIHSEWIEYHVK------K   67 (342)
T ss_dssp             CEEEEETCSSHHHHHHHHHHHHSTTCEEEEEESCCGGGGGGT-------TCTTEEEEECCTTTCSHHHHHHHH------H
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCCcchhhhc-------cCCCeEEEECccCChHHHHHHHHh------C
Confidence            6899999999999999999999995 8998887654422221       146799999999987776553321      5


Q ss_pred             eeEEEEcCCCCCCCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCccccc---
Q 025509           80 LNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDK---  156 (251)
Q Consensus        80 id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~---  156 (251)
                      +|+|||+|+.....  ...++....+++|+.++..+++++...          +.+++++||......... ..+.+   
T Consensus        68 ~d~Vih~a~~~~~~--~~~~~~~~~~~~nv~gt~~ll~~~~~~----------~~~~~~~ss~~~~~~~~~-~~~~~~~~  134 (342)
T d2blla1          68 CDVVLPLVAIATPI--EYTRNPLRVFELDFEENLRIIRYCVKY----------RKRIIFPSTSEVYGMCSD-KYFDEDHS  134 (342)
T ss_dssp             CSEEEECBCCCCHH--HHHHSHHHHHHHHTHHHHHHHHHHHHT----------TCEEEEECCGGGGBTCCC-SSBCTTTC
T ss_pred             CCcccccccccccc--ccccCCccccccccccccccccccccc----------cccccccccccccccccc-cccccccc
Confidence            89999999964431  133455678999999999988886443          346777777654443222 11111   


Q ss_pred             -CCCCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcc
Q 025509          157 -INDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNII  209 (251)
Q Consensus       157 -~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~  209 (251)
                       ........+...|+.+|.+.+.+++.+++.++     +.+..+.|+.+..+-.
T Consensus       135 ~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~-----~~~~i~r~~~~~g~~~  183 (342)
T d2blla1         135 NLIVGPVNKPRWIYSVSKQLLDRVIWAYGEKEG-----LQFTLFRPFNWMGPRL  183 (342)
T ss_dssp             CCBCCCTTCGGGHHHHHHHHHHHHHHHHHHHHC-----CCEEEEEECSEECSSC
T ss_pred             cccccccCCCcchhhhcccchhhhhhhhhcccC-----ceeEEeeccccccccc
Confidence             11112234456899999999999998888774     5566688888877643

>d1oc2a_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

Probab=99.69  E-value=1.6e-16  Score=135.13  Aligned_cols=185  Identities=19%  Similarity=0.186  Sum_probs=126.0

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      |.||||||+|.||++++++|.++|+.|.+++++.-.-......+ +...+.++.++.+|+.|.+.+..++.       ..
T Consensus         3 mkILVTGgtGfIGs~lv~~L~~~g~~v~v~~~d~~~~~~~~~~~-~~~~~~~i~~~~~Di~d~~~~~~~~~-------~~   74 (346)
T d1oc2a_           3 KNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKANL-EAILGDRVELVVGDIADAELVDKLAA-------KA   74 (346)
T ss_dssp             SEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGT-GGGCSSSEEEEECCTTCHHHHHHHHT-------TC
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCCeEEEEEeCCCccccHHHH-HHhhcCCeEEEEccCCCHHHHHHHHh-------hh
Confidence            68999999999999999999999986554443210000000000 11225679999999999988887654       57


Q ss_pred             eEEEEcCCCCCCCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCcccccccc--CCc------
Q 025509           81 NILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYH--EGI------  152 (251)
Q Consensus        81 d~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~--~~~------  152 (251)
                      |.++|.|+.....  ...++..+.+++|+.++.+++.++...          +.++|++||.......+  ...      
T Consensus        75 ~~v~~~a~~~~~~--~~~~~~~~~~~~N~~g~~nll~~~~~~----------~~k~i~~ss~~vyg~~~~~~~~~~~~~~  142 (346)
T d1oc2a_          75 DAIVHYAAESHND--NSLNDPSPFIHTNFIGTYTLLEAARKY----------DIRFHHVSTDEVYGDLPLREDLPGHGEG  142 (346)
T ss_dssp             SEEEECCSCCCHH--HHHHCCHHHHHHHTHHHHHHHHHHHHH----------TCEEEEEEEGGGGCCBCCGGGSTTTTCS
T ss_pred             hhhhhhhhccccc--chhhCcccceeeehHhHHhhhhhhccc----------cccccccccceEecccCccccccccccC
Confidence            7889999864431  223456778999999999988766444          24788888776543211  111      


Q ss_pred             ccccCCCCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCccc
Q 025509          153 RFDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIR  210 (251)
Q Consensus       153 ~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~  210 (251)
                      +..++.+..+..+...|+.+|.+.+.+++.+..++   |  +++..+.|+.+..|...
T Consensus       143 ~~~~~~e~~~~~p~s~Y~~sK~~~E~~~~~~~~~~---~--i~~~ilR~~~vyGp~~~  195 (346)
T d1oc2a_         143 PGEKFTAETNYNPSSPYSSTKAASDLIVKAWVRSF---G--VKATISNCSNNYGPYQH  195 (346)
T ss_dssp             TTSSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH---C--CEEEEEEECCEESTTCC
T ss_pred             cccccccCCCCCCCCHHHHHHHHHHHHHHHHHHHc---C--CCEEEEeecceeCCCCC
Confidence            11122333344455789999999999988888766   4  78888999999987543

>d1gy8a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Trypanosoma brucei [TaxId: 5691]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Trypanosoma brucei [TaxId: 5691]

Probab=99.68  E-value=1.1e-15  Score=131.64  Aligned_cols=191  Identities=14%  Similarity=0.079  Sum_probs=132.8

Q ss_pred             CEEEEECCCChhHHHHHHHHHH-cCCEEEEEec---------CchhHHHHHHHHHhh------CCCCceEEEEecCCCHH
Q 025509            1 MDIVITGATSGIGTETARVLAL-RGVHVVMGVR---------DIAAGKDVKETIVKE------IPSAKVDAMELDLSSLA   64 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~-~G~~Vi~~~r---------~~~~~~~~~~~~~~~------~~~~~v~~~~~D~~~~~   64 (251)
                      |+||||||+|.||++++++|++ .|++|+++++         .....++....+...      .....+.++.+|++|.+
T Consensus         3 MKVLITG~tGfIGs~lv~~LL~~~~~~V~~~D~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~   82 (383)
T d1gy8a_           3 MRVLVCGGAGYIGSHFVRALLRDTNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKPPWADRYAALEVGDVRNED   82 (383)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHCCCEEEEEECCTTTTTCCTTSCCHHHHHHHHHHSCSSCCTTTTCCCEEEESCTTCHH
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHhCCCEEEEEecCCcccccchhhhhhhhHHHHhhhhccccccccccceEEEECcccCHH
Confidence            6899999999999999999986 6899999874         111223333333221      11346888999999999


Q ss_pred             HHHHHHHHHHhcCCCeeEEEEcCCCCCCCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccc
Q 025509           65 SVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGH  144 (251)
Q Consensus        65 ~i~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~  144 (251)
                      .++++++..    .++|+|+|.|+....  ....+.....+++|+.++..++.++...         +..++++++|...
T Consensus        83 ~l~~~~~~~----~~~d~ViH~Aa~~~~--~~~~~~~~~~~~~N~~~t~~~l~~~~~~---------~~~~~~~~~s~~~  147 (383)
T d1gy8a_          83 FLNGVFTRH----GPIDAVVHMCAFLAV--GESVRDPLKYYDNNVVGILRLLQAMLLH---------KCDKIIFSSSAAI  147 (383)
T ss_dssp             HHHHHHHHS----CCCCEEEECCCCCCH--HHHHHCHHHHHHHHHHHHHHHHHHHHHT---------TCCEEEEEEEGGG
T ss_pred             Hhhhhhhcc----ceeehhhcccccccc--cccccccccccccccccccccchhhhcc---------CCccccccccccc
Confidence            998888754    479999999996432  1223456678899999999988877644         2347777776654


Q ss_pred             cccccCC---cccccCCCCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccC
Q 025509          145 RLAYHEG---IRFDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  211 (251)
Q Consensus       145 ~~~~~~~---~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  211 (251)
                      .......   ....++....+..+...|+.+|.+.+.+++.+...++     +.+..+.|+.+..|....
T Consensus       148 ~~~~~~~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~e~~~~~~~~~~g-----l~~~~lR~~~vyG~~~~~  212 (383)
T d1gy8a_         148 FGNPTMGSVSTNAEPIDINAKKSPESPYGESKLIAERMIRDCAEAYG-----IKGICLRYFNACGAHEDG  212 (383)
T ss_dssp             TBSCCC-----CCCCBCTTSCCBCSSHHHHHHHHHHHHHHHHHHHHC-----CEEEEEEECEEECCCTTS
T ss_pred             ccccccccccccccccccccCCCCCCHHHhhHhHHHHHHHHHHHHhC-----CCEEEEecceeeccCccc
Confidence            4322111   1112233334455677899999999998888877654     777889999998876553

>d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-glucuronate decarboxylase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.68  E-value=2.7e-16  Score=132.01  Aligned_cols=177  Identities=14%  Similarity=0.075  Sum_probs=120.6

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCch-hHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCC
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIA-AGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQ   79 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~-~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~   79 (251)
                      |+||||||+|.||++++++|+++|++|+++++... ..+..    ........+.....|+.+.            ...+
T Consensus         2 KKIlVtG~sGfiG~~lv~~L~~~g~~V~~~d~~~~~~~~~~----~~~~~~~~~d~~~~~~~~~------------~~~~   65 (312)
T d2b69a1           2 KRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNV----EHWIGHENFELINHDVVEP------------LYIE   65 (312)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGT----GGGTTCTTEEEEECCTTSC------------CCCC
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCCcCCHHHH----HHhcCCCceEEEehHHHHH------------HHcC
Confidence            78999999999999999999999999999886321 11111    1111123455555555321            2236


Q ss_pred             eeEEEEcCCCCCCCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCccccc--C
Q 025509           80 LNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDK--I  157 (251)
Q Consensus        80 id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~--~  157 (251)
                      +|+|||+|+.....  .+.++..+.+++|+.++..+++++...          +.++|++||.+... .....+..+  .
T Consensus        66 ~d~VihlAa~~~~~--~~~~~~~~~~~~Nv~g~~~ll~~~~~~----------~~k~I~~SS~~vy~-~~~~~~~~e~~~  132 (312)
T d2b69a1          66 VDQIYHLASPASPP--NYMYNPIKTLKTNTIGTLNMLGLAKRV----------GARLLLASTSEVYG-DPEVHPQSEDYW  132 (312)
T ss_dssp             CSEEEECCSCCSHH--HHTTCHHHHHHHHHHHHHHHHHHHHHH----------TCEEEEEEEGGGGB-SCSSSSBCTTCC
T ss_pred             CCEEEECcccCCch--hHHhCHHHHHHHHHHHHHHHHHHHHHc----------CCcEEEEEChheec-CCCCCCCCcccc
Confidence            99999999864421  123456788999999999998876432          24899999865543 222222221  1


Q ss_pred             CCCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccC
Q 025509          158 NDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  211 (251)
Q Consensus       158 ~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  211 (251)
                      ....+..+...|+.+|.+.+.+++..+..+   |  +.+..+.|+.|..|....
T Consensus       133 ~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~--~~~~~lR~~~vyGp~~~~  181 (312)
T d2b69a1         133 GHVNPIGPRACYDEGKRVAETMCYAYMKQE---G--VEVRVARIFNTFGPRMHM  181 (312)
T ss_dssp             CBCCSSSTTHHHHHHHHHHHHHHHHHHHHH---C--CCEEEEEECCEECTTCCT
T ss_pred             CCCCCCCCccHHHHHHHHHHHHHHHHHHHh---C--CcEEEEEeeeEECCCCCC
Confidence            122344456789999999999998888776   3  677789999999886543

>d1r6da_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces venezuelae [TaxId: 54571]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptomyces venezuelae [TaxId: 54571]

Probab=99.66  E-value=2.3e-16  Score=132.78  Aligned_cols=181  Identities=17%  Similarity=0.115  Sum_probs=126.1

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEE------EEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHH
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVV------MGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYN   74 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi------~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~   74 (251)
                      |+||||||+|.||++++++|+++|+.|.      ..+.......  ...+........+.++..|.++........    
T Consensus         1 MkIlItG~tGfIG~~l~~~L~~~g~~v~~~~~i~~~d~~~~~~~--~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~----   74 (322)
T d1r6da_           1 MRLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGN--RANLAPVDADPRLRFVHGDIRDAGLLAREL----   74 (322)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEECCCTTCC--GGGGGGGTTCTTEEEEECCTTCHHHHHHHT----
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCCccCCceEEEEeCCCcccc--HhHhhhhhcCCCeEEEEeccccchhhhccc----
Confidence            6899999999999999999999987543      3332111000  000111111457999999999987666432    


Q ss_pred             hcCCCeeEEEEcCCCCCCCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCccc
Q 025509           75 IQHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRF  154 (251)
Q Consensus        75 ~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~  154 (251)
                         ..+|.++|.|+....  ....+.....+++|+.++..+++++...         +..++|++||.+.... ....+ 
T Consensus        75 ---~~~d~vi~~a~~~~~--~~~~~~~~~~~~~N~~gt~~ll~~~~~~---------~~~~~I~~Ss~~~yg~-~~~~~-  138 (322)
T d1r6da_          75 ---RGVDAIVHFAAESHV--DRSIAGASVFTETNVQGTQTLLQCAVDA---------GVGRVVHVSTNQVYGS-IDSGS-  138 (322)
T ss_dssp             ---TTCCEEEECCSCCCH--HHHHHCCHHHHHHHTHHHHHHHHHHHHT---------TCCEEEEEEEGGGGCC-CSSSC-
T ss_pred             ---cccceEEeecccccc--cccccchHHHhhhhHHHHHHHHHHHHHc---------CCceEEEeecceeecC-CCCCC-
Confidence               378999999986432  2234556778899999999998887643         2458999998765432 22222 


Q ss_pred             ccCCCCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCccc
Q 025509          155 DKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIR  210 (251)
Q Consensus       155 ~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~  210 (251)
                        ++++.+..+...|+.+|.+.+.+++.+++++.     +.+..+.|+.+..|...
T Consensus       139 --~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~-----~~~~~lR~~~vyGp~~~  187 (322)
T d1r6da_         139 --WTESSPLEPNSPYAASKAGSDLVARAYHRTYG-----LDVRITRCCNNYGPYQH  187 (322)
T ss_dssp             --BCTTSCCCCCSHHHHHHHHHHHHHHHHHHHHC-----CCEEEEEECEEECTTCC
T ss_pred             --CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhC-----CCEEEEEeeeEECcCCC
Confidence              33444555667899999999999999987763     77778999999987644

>d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose-3', 5'-epimerase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.65  E-value=7.8e-16  Score=131.44  Aligned_cols=180  Identities=18%  Similarity=0.072  Sum_probs=126.7

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      |+||||||+|.||++++++|.++|+.|+++++......      ...  .....+..+|+.+.+.+.+.++       .+
T Consensus        16 MKILVTGgsGfIGs~lv~~L~~~g~~V~~~d~~~~~~~------~~~--~~~~~~~~~D~~~~~~~~~~~~-------~~   80 (363)
T d2c5aa1          16 LKISITGAGGFIASHIARRLKHEGHYVIASDWKKNEHM------TED--MFCDEFHLVDLRVMENCLKVTE-------GV   80 (363)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCSSS------CGG--GTCSEEEECCTTSHHHHHHHHT-------TC
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCcCEEEEEeCCCccch------hhh--cccCcEEEeechhHHHHHHHhh-------cC
Confidence            57999999999999999999999999999887543210      000  1245778889999888776553       68


Q ss_pred             eEEEEcCCCCCCCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCc---ccccC
Q 025509           81 NILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGI---RFDKI  157 (251)
Q Consensus        81 d~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~---~~~~~  157 (251)
                      |.|||.|+..... ....+.....+.+|+.++..++.++...-         ..++|++||...........   .....
T Consensus        81 d~Vih~a~~~~~~-~~~~~~~~~~~~~n~~gt~~ll~~~~~~~---------vk~~i~~SS~~~~~~~~~~~~~~~~~~~  150 (363)
T d2c5aa1          81 DHVFNLAADMGGM-GFIQSNHSVIMYNNTMISFNMIEAARING---------IKRFFYASSACIYPEFKQLETTNVSLKE  150 (363)
T ss_dssp             SEEEECCCCCCCH-HHHTTCHHHHHHHHHHHHHHHHHHHHHTT---------CSEEEEEEEGGGSCGGGSSSSSSCEECG
T ss_pred             CeEeecccccccc-cccccccccccccccchhhHHHHhHHhhC---------cccccccccccccccccccccccccccc
Confidence            9999999864431 12345677889999999988888866552         34899999976554322111   00000


Q ss_pred             CCCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCccc
Q 025509          158 NDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIR  210 (251)
Q Consensus       158 ~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~  210 (251)
                      ....+..+...|+.+|.+.+.+++.+..++   |  +.+..+.|+.+..+...
T Consensus       151 ~e~~~~~p~~~Yg~sK~~~E~~~~~~~~~~---g--l~~~ilR~~~vyG~~~~  198 (363)
T d2c5aa1         151 SDAWPAEPQDAFGLEKLATEELCKHYNKDF---G--IECRIGRFHNIYGPFGT  198 (363)
T ss_dssp             GGGSSBCCSSHHHHHHHHHHHHHHHHHHHH---C--CEEEEEEECCEECTTSC
T ss_pred             ccCCcCCCCCHHHHHHHHHHHHHHHHHHHh---C--CCEEEEEeeeEeccCCc
Confidence            011223345689999999999888888776   4  77888999999887543

>d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Biliverdin IX beta reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.63  E-value=2.7e-15  Score=118.36  Aligned_cols=153  Identities=20%  Similarity=0.147  Sum_probs=103.0

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      |+|+||||+|+||++++++|+++|++|.++.|++.++...        ....+.++.+|++|.+++.+.++       +.
T Consensus         4 kkIlV~GatG~iG~~v~~~Ll~~g~~V~~~~R~~~~~~~~--------~~~~~~~~~gD~~d~~~l~~al~-------~~   68 (205)
T d1hdoa_           4 KKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSE--------GPRPAHVVVGDVLQAADVDKTVA-------GQ   68 (205)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGGGSCSS--------SCCCSEEEESCTTSHHHHHHHHT-------TC
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCcCEEEEEEcChhhcccc--------cccccccccccccchhhHHHHhc-------CC
Confidence            6799999999999999999999999999999998764321        13568899999999999887665       57


Q ss_pred             eEEEEcCCCCCCCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccccCCCC
Q 025509           81 NILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDP  160 (251)
Q Consensus        81 d~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~  160 (251)
                      |+||+++|...+.   +..      +++..++.++++    .+++.     +-.++|++||......           .+
T Consensus        69 d~vi~~~g~~~~~---~~~------~~~~~~~~~l~~----aa~~~-----~v~r~i~~ss~~~~~~-----------~~  119 (205)
T d1hdoa_          69 DAVIVLLGTRNDL---SPT------TVMSEGARNIVA----AMKAH-----GVDKVVACTSAFLLWD-----------PT  119 (205)
T ss_dssp             SEEEECCCCTTCC---SCC------CHHHHHHHHHHH----HHHHH-----TCCEEEEECCGGGTSC-----------TT
T ss_pred             CEEEEEeccCCch---hhh------hhhHHHHHHHHH----HHHhc-----CCCeEEEEeeeeccCC-----------Cc
Confidence            9999999964332   111      123334444444    44443     3569999998654321           01


Q ss_pred             CCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccC
Q 025509          161 SGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIAT  206 (251)
Q Consensus       161 ~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t  206 (251)
                      ...+....|...|.+.+.+       +...|  +....|.||.+..
T Consensus       120 ~~~~~~~~~~~~~~~~e~~-------l~~~~--~~~tiirp~~~~~  156 (205)
T d1hdoa_         120 KVPPRLQAVTDDHIRMHKV-------LRESG--LKYVAVMPPHIGD  156 (205)
T ss_dssp             CSCGGGHHHHHHHHHHHHH-------HHHTC--SEEEEECCSEEEC
T ss_pred             cccccccccchHHHHHHHH-------HHhcC--CceEEEecceecC
Confidence            1122233455555554432       33456  7777899998854

>d2bkaa1 c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: TAT-interacting protein TIP30
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.53  E-value=1.6e-14  Score=116.05  Aligned_cols=156  Identities=15%  Similarity=0.085  Sum_probs=107.3

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCC--EEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCC
Q 025509            1 MDIVITGATSGIGTETARVLALRGV--HVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHH   78 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~--~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g   78 (251)
                      |+||||||+|.||++++++|.++|.  +|++++|++......      .  ...+....+|+.+.+++...       ..
T Consensus        15 k~IlItGaTG~iG~~l~~~Ll~~g~~~~v~~~~R~~~~~~~~------~--~~~i~~~~~D~~~~~~~~~~-------~~   79 (232)
T d2bkaa1          15 KSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEE------A--YKNVNQEVVDFEKLDDYASA-------FQ   79 (232)
T ss_dssp             CEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCSG------G--GGGCEEEECCGGGGGGGGGG-------GS
T ss_pred             CEEEEECCCcHHHHHHHHHHHhCCCCCEEEEEecChhhhccc------c--cceeeeeeeccccccccccc-------cc
Confidence            5799999999999999999999995  799999976442210      1  23567777888776554432       23


Q ss_pred             CeeEEEEcCCCCCCCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccccCC
Q 025509           79 QLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKIN  158 (251)
Q Consensus        79 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~  158 (251)
                      .+|+++|++|...     .........++|+.++..+++++...         +-.++|++||.....            
T Consensus        80 ~~d~vi~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~a~~~---------~v~~fi~~Ss~~~~~------------  133 (232)
T d2bkaa1          80 GHDVGFCCLGTTR-----GKAGAEGFVRVDRDYVLKSAELAKAG---------GCKHFNLLSSKGADK------------  133 (232)
T ss_dssp             SCSEEEECCCCCH-----HHHHHHHHHHHHTHHHHHHHHHHHHT---------TCCEEEEECCTTCCT------------
T ss_pred             ccccccccccccc-----cccchhhhhhhcccccceeeeccccc---------CccccccCCcccccc------------
Confidence            6899999998521     22345567888998888887776432         345899999865432            


Q ss_pred             CCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCccc
Q 025509          159 DPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIR  210 (251)
Q Consensus       159 ~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~  210 (251)
                           .....|+.+|...+...+    ++   |. -++..+.||.+..+...
T Consensus       134 -----~~~~~Y~~~K~~~E~~l~----~~---~~-~~~~IlRP~~i~G~~~~  172 (232)
T d2bkaa1         134 -----SSNFLYLQVKGEVEAKVE----EL---KF-DRYSVFRPGVLLCDRQE  172 (232)
T ss_dssp             -----TCSSHHHHHHHHHHHHHH----TT---CC-SEEEEEECCEEECTTGG
T ss_pred             -----CccchhHHHHHHhhhccc----cc---cc-cceEEecCceeecCCCc
Confidence                 223469999987664332    22   31 13445899999887544

>d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein At5g02240 (T7H20 290)
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.48  E-value=5.4e-13  Score=106.10  Aligned_cols=165  Identities=13%  Similarity=0.107  Sum_probs=107.0

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCE--EEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCC
Q 025509            1 MDIVITGATSGIGTETARVLALRGVH--VVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHH   78 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~--Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g   78 (251)
                      ++||||||+|+||+++++.|+++|+.  |+...|++.+....         ...+.++.+|+++.+++.+.++       
T Consensus         4 ~tVlVtGatG~iG~~l~~~Ll~~g~~v~v~~~~R~~~~~~~~---------~~~~~~~~~d~~~~~~~~~~~~-------   67 (252)
T d2q46a1           4 PTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKI---------GGEADVFIGDITDADSINPAFQ-------   67 (252)
T ss_dssp             CEEEEESTTSTTHHHHHHHHHHTTTTCEEEEEESCHHHHHHT---------TCCTTEEECCTTSHHHHHHHHT-------
T ss_pred             CEEEEECCccHHHHHHHHHHHHCCCcEEEEEEcCCHHHHHhc---------cCCcEEEEeeeccccccccccc-------
Confidence            58999999999999999999999964  66667876553321         4578899999999998887665       


Q ss_pred             CeeEEEEcCCCCCC-----------CCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCcccccc
Q 025509           79 QLNILINNAGIMGT-----------PFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLA  147 (251)
Q Consensus        79 ~id~lv~~ag~~~~-----------~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~  147 (251)
                      .+|.+||+|+....           ........+.....+|+.++..++......         ..+.....++..... 
T Consensus        68 ~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~s~~~~~~-  137 (252)
T d2q46a1          68 GIDALVILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKVA---------GVKHIVVVGSMGGTN-  137 (252)
T ss_dssp             TCSEEEECCCCCCEECTTCCTTSCCCCCEECCTTCSHHHHTTHHHHHHHHHHHHH---------TCSEEEEEEETTTTC-
T ss_pred             cceeeEEEEeeccccccccchhhhhhcccccccchhhhccccccceeeccccccc---------cccccccccccccCC-
Confidence            68999999986421           011223345667888999988776655443         245777777644332 


Q ss_pred             ccCCcccccCCCCCCCCcccccchhHHHH-HHHHHHHHHHhccCCCcEEEEEeeCCcccCCccc
Q 025509          148 YHEGIRFDKINDPSGYNGFRAYSQSKLAN-ILHANELARRLKEDGVDITANSVHPGAIATNIIR  210 (251)
Q Consensus       148 ~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~-~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~  210 (251)
                                    +......+..++... ......+   ....|  +.+..+.||.+..+...
T Consensus       138 --------------~~~~~~~~~~~~~~~~~~~~~~~---~~~~~--~~~~ilRp~~v~g~~~~  182 (252)
T d2q46a1         138 --------------PDHPLNKLGNGNILVWKRKAEQY---LADSG--TPYTIIRAGGLLDKEGG  182 (252)
T ss_dssp             --------------TTCGGGGGGGCCHHHHHHHHHHH---HHHSS--SCEEEEEECEEECSCTT
T ss_pred             --------------CCcccccccccchhhhhhhhhhh---hhccc--ccceeecceEEECCCcc
Confidence                          122222222222222 2222222   22345  66777999999777543

>d1vl0a_ c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD {Clostridium acetobutylicum [TaxId: 1488]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: DTDP-4-dehydrorhamnose reductase RfbD
species: Clostridium acetobutylicum [TaxId: 1488]

Probab=99.42  E-value=1.5e-12  Score=106.31  Aligned_cols=155  Identities=22%  Similarity=0.231  Sum_probs=104.8

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      |+||||||||.||++++++|.++|++|+.++|++                       +|++|.++++++++..     ++
T Consensus         2 MKIlItGasGfiG~~l~~~L~~~g~~Vi~~~r~~-----------------------~D~~d~~~~~~~l~~~-----~~   53 (281)
T d1vl0a_           2 MKILITGANGQLGREIQKQLKGKNVEVIPTDVQD-----------------------LDITNVLAVNKFFNEK-----KP   53 (281)
T ss_dssp             EEEEEESTTSHHHHHHHHHHTTSSEEEEEECTTT-----------------------CCTTCHHHHHHHHHHH-----CC
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCEEEEeechh-----------------------ccCCCHHHHHHHHHHc-----CC
Confidence            5799999999999999999999999999988853                       4899999999988865     68


Q ss_pred             eEEEEcCCCCCCCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccccCCCC
Q 025509           81 NILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDP  160 (251)
Q Consensus        81 d~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~  160 (251)
                      |+|||+|+....  +......+..+..|+.....+.......          ...+++.||..... .....+   ..+.
T Consensus        54 d~vih~a~~~~~--~~~~~~~~~~~~~n~~~~~~~~~~~~~~----------~~~~~~~ss~~v~~-~~~~~~---~~e~  117 (281)
T d1vl0a_          54 NVVINCAAHTAV--DKCEEQYDLAYKINAIGPKNLAAAAYSV----------GAEIVQISTDYVFD-GEAKEP---ITEF  117 (281)
T ss_dssp             SEEEECCCCCCH--HHHHHCHHHHHHHHTHHHHHHHHHHHHH----------TCEEEEEEEGGGSC-SCCSSC---BCTT
T ss_pred             CEEEeecccccc--ccccccchhhcccccccccccccccccc----------cccccccccceeee-cccccc---cccc
Confidence            999999986432  2233445566777777766655544332          23566666544322 222222   2233


Q ss_pred             CCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCc
Q 025509          161 SGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNI  208 (251)
Q Consensus       161 ~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~  208 (251)
                      .+......|+.+|...+.+.+    +.   +  .....+.|+.+..+.
T Consensus       118 ~~~~~~~~~~~~k~~~e~~~~----~~---~--~~~~i~R~~~vyG~~  156 (281)
T d1vl0a_         118 DEVNPQSAYGKTKLEGENFVK----AL---N--PKYYIVRTAWLYGDG  156 (281)
T ss_dssp             SCCCCCSHHHHHHHHHHHHHH----HH---C--SSEEEEEECSEESSS
T ss_pred             ccccchhhhhhhhhHHHHHHH----Hh---C--CCccccceeEEeCCC
Confidence            344556688888877654432    22   2  234459999998764

>d1n2sa_ c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {Salmonella enterica serovar typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD)
species: Salmonella enterica serovar typhimurium [TaxId: 90371]

Probab=99.41  E-value=5e-13  Score=109.86  Aligned_cols=139  Identities=17%  Similarity=0.153  Sum_probs=97.3

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      |+||||||+|.||++++++|.++|. ++.++++...                   +..|++|.+.++++++..     ++
T Consensus         1 MKILItG~tGfiG~~l~~~L~~~g~-~v~~~~~~~~-------------------~~~Dl~~~~~~~~~i~~~-----~~   55 (298)
T d1n2sa_           1 MNILLFGKTGQVGWELQRSLAPVGN-LIALDVHSKE-------------------FCGDFSNPKGVAETVRKL-----RP   55 (298)
T ss_dssp             CEEEEECTTSHHHHHHHHHTTTTSE-EEEECTTCSS-------------------SCCCTTCHHHHHHHHHHH-----CC
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCC-EEEEECCCcc-------------------ccCcCCCHHHHHHHHHHc-----CC
Confidence            6899999999999999999999885 4444443221                   336999999999988875     68


Q ss_pred             eEEEEcCCCCCCCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccccCCCC
Q 025509           81 NILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDP  160 (251)
Q Consensus        81 d~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~  160 (251)
                      |+|||+||....  ..+.+..+..+++|+.++..+..++..          .+.+++++||..... ...+.++.+.   
T Consensus        56 D~Vih~Aa~~~~--~~~~~~~~~~~~~n~~~~~~l~~~~~~----------~~~~~~~~ss~~~~~-~~~~~~~~E~---  119 (298)
T d1n2sa_          56 DVIVNAAAHTAV--DKAESEPELAQLLNATSVEAIAKAANE----------TGAWVVHYSTDYVFP-GTGDIPWQET---  119 (298)
T ss_dssp             SEEEECCCCCCH--HHHTTCHHHHHHHHTHHHHHHHHHHTT----------TTCEEEEEEEGGGSC-CCTTCCBCTT---
T ss_pred             CEEEEecccccc--cccccCccccccccccccccchhhhhc----------ccccccccccccccc-CCCCCCCccc---
Confidence            999999996532  223445677889999998888776532          245788887765433 2333344332   


Q ss_pred             CCCCcccccchhHHHHHHHH
Q 025509          161 SGYNGFRAYSQSKLANILHA  180 (251)
Q Consensus       161 ~~~~~~~~Y~~sK~a~~~~~  180 (251)
                      .+..+...|+.+|.+.+.+.
T Consensus       120 ~~~~p~~~y~~~k~~~e~~~  139 (298)
T d1n2sa_         120 DATSPLNVYGKTKLAGEKAL  139 (298)
T ss_dssp             SCCCCSSHHHHHHHHHHHHH
T ss_pred             cccCCCchHhhhhhhhhhhH
Confidence            23334568999998876543

>d2a35a1 c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein PA4017
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.28  E-value=1.2e-11  Score=97.22  Aligned_cols=150  Identities=15%  Similarity=0.098  Sum_probs=97.9

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCC--EEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCC
Q 025509            1 MDIVITGATSGIGTETARVLALRGV--HVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHH   78 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~--~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g   78 (251)
                      |+||||||||.||++++++|.++|+  +|+...|++..          .  ...   +..+..+..++.      ....+
T Consensus         3 KkIlItGatG~iG~~lv~~L~~~~~~~~v~~~~r~~~~----------~--~~~---~~~~~~d~~~~~------~~~~~   61 (212)
T d2a35a1           3 KRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKALA----------E--HPR---LDNPVGPLAELL------PQLDG   61 (212)
T ss_dssp             CEEEEECTTSHHHHHHHHHHHHCTTCCEEECCBSSCCC----------C--CTT---EECCBSCHHHHG------GGCCS
T ss_pred             CEEEEECCCcHHHHHHHHHHHhCCCeEEEEEEeCCchh----------h--ccc---ccccccchhhhh------hcccc
Confidence            7899999999999999999999997  56666665421          0  112   334444544332      12235


Q ss_pred             CeeEEEEcCCCCCCCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccccCC
Q 025509           79 QLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKIN  158 (251)
Q Consensus        79 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~  158 (251)
                      .+|.+|+++|....    ....-+...++|+.++..+++++...         +-.+++++||..+..            
T Consensus        62 ~~d~vi~~~g~~~~----~~~~~~~~~~~~~~~~~~~~~~a~~~---------~v~~~i~~Ss~~~~~------------  116 (212)
T d2a35a1          62 SIDTAFCCLGTTIK----EAGSEEAFRAVDFDLPLAVGKRALEM---------GARHYLVVSALGADA------------  116 (212)
T ss_dssp             CCSEEEECCCCCHH----HHSSHHHHHHHHTHHHHHHHHHHHHT---------TCCEEEEECCTTCCT------------
T ss_pred             chheeeeeeeeecc----ccccccccccchhhhhhhcccccccc---------ccccccccccccccc------------
Confidence            78999999985321    11223567888999988888765332         346899999865432            


Q ss_pred             CCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcc
Q 025509          159 DPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNII  209 (251)
Q Consensus       159 ~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~  209 (251)
                           .....|..+|...+...+       ..+. -+...+.|+++..+..
T Consensus       117 -----~~~~~y~~~K~~~E~~l~-------~~~~-~~~~I~Rp~~v~G~~~  154 (212)
T d2a35a1         117 -----KSSIFYNRVKGELEQALQ-------EQGW-PQLTIARPSLLFGPRE  154 (212)
T ss_dssp             -----TCSSHHHHHHHHHHHHHT-------TSCC-SEEEEEECCSEESTTS
T ss_pred             -----ccccchhHHHHHHhhhcc-------cccc-ccceeeCCcceeCCcc
Confidence                 234578999977654332       2231 1344589999987753

>d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Pinoresinol-lariciresinol reductase
species: Giant arborvitae (Thuja plicata) [TaxId: 3316]

Probab=99.21  E-value=3.8e-11  Score=98.86  Aligned_cols=82  Identities=15%  Similarity=0.120  Sum_probs=61.2

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      ++||||||+|.||++++++|.++|++|+++.|+...................+.++.+|+.+.+++.+.+.       ..
T Consensus         4 ~KILVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~~v~~v~~d~~d~~~~~~~~~-------~~   76 (312)
T d1qyda_           4 SRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFKQLGAKLIEASLDDHQRLVDALK-------QV   76 (312)
T ss_dssp             CCEEEESTTSTTHHHHHHHHHHTTCCEEEECCSCCSSCHHHHHHHHHHHTTTCEEECCCSSCHHHHHHHHT-------TC
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCCcccchhHHHHHhhhccCCcEEEEeecccchhhhhhcc-------Cc
Confidence            46999999999999999999999999999999754322111111111114568999999999988877655       56


Q ss_pred             eEEEEcCCC
Q 025509           81 NILINNAGI   89 (251)
Q Consensus        81 d~lv~~ag~   89 (251)
                      +.++++++.
T Consensus        77 ~~~~~~~~~   85 (312)
T d1qyda_          77 DVVISALAG   85 (312)
T ss_dssp             SEEEECCCC
T ss_pred             chhhhhhhh
Confidence            788888864

>d1eq2a_ c.2.1.2 (A:) ADP-L-glycero-D-mannoheptose 6-epimerase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: ADP-L-glycero-D-mannoheptose 6-epimerase
species: Escherichia coli [TaxId: 562]

Probab=99.18  E-value=4e-11  Score=98.53  Aligned_cols=172  Identities=12%  Similarity=0.043  Sum_probs=102.3

Q ss_pred             EEEECCCChhHHHHHHHHHHcCC-EEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHH--hcCCC
Q 025509            3 IVITGATSGIGTETARVLALRGV-HVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYN--IQHHQ   79 (251)
Q Consensus         3 vlItG~s~gIG~a~a~~l~~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~--~~~g~   79 (251)
                      ||||||+|.||++++++|+++|+ .|+++++-... .+... +.+    .    ..+|..+.+..   .+.+.  .....
T Consensus         2 ILITGgsGfIGs~lv~~L~~~g~~~V~~~d~~~~~-~~~~~-~~~----~----~~~~~~~~~~~---~~~~~~~~~~~~   68 (307)
T d1eq2a_           2 IIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDG-TKFVN-LVD----L----NIADYMDKEDF---LIQIMAGEEFGD   68 (307)
T ss_dssp             EEEETTTSHHHHHHHHHHHTTTCCCEEEEECCSSG-GGGHH-HHT----S----CCSEEEEHHHH---HHHHHTTCCCSS
T ss_pred             EEEecCccHHHHHHHHHHHhCCCCeEEEEECCCCc-chhhc-ccc----c----chhhhccchHH---HHHHhhhhcccc
Confidence            89999999999999999999997 57777632211 11111 111    1    11233333332   22222  23457


Q ss_pred             eeEEEEcCCCCCCCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCcccccCCC
Q 025509           80 LNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKIND  159 (251)
Q Consensus        80 id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~  159 (251)
                      +++++|.|+....    .....+...+.|+.++..++.++...          ..++++.||...........    ...
T Consensus        69 ~~~i~~~aa~~~~----~~~~~~~~~~~~~~~~~~~l~~~~~~----------~i~~v~~ss~~~~~~~~~~~----~~~  130 (307)
T d1eq2a_          69 VEAIFHEGACSST----TEWDGKYMMDNNYQYSKELLHYCLER----------EIPFLYASSAATYGGRTSDF----IES  130 (307)
T ss_dssp             CCEEEECCSCCCT----TCCCHHHHHHHTHHHHHHHHHHHHHH----------TCCEEEEEEGGGGTTCCSCB----CSS
T ss_pred             hhhhhhhcccccc----cccccccccccccccccccccccccc----------cccccccccccccccccccc----ccc
Confidence            8999999975332    22234556777788877776654433          23566666655544322111    111


Q ss_pred             CCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCccc
Q 025509          160 PSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIR  210 (251)
Q Consensus       160 ~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~  210 (251)
                      ..+......|+.+|.+.+.+++.+...+   +  +.+..+.|..+..|...
T Consensus       131 ~~~~~~~~~Y~~~K~~~e~~~~~~~~~~---~--~~~~~~r~~~vyGp~~~  176 (307)
T d1eq2a_         131 REYEKPLNVYGYSKFLFDEYVRQILPEA---N--SQIVGFRYFNVYGPREG  176 (307)
T ss_dssp             GGGCCCSSHHHHHHHHHHHHHHHHGGGC---S--SCEEEEEECEEESSSCG
T ss_pred             ccccccccccccccchhhhhcccccccc---c--cccccccceeEeecccc
Confidence            1133455689999999988877765554   3  55666899998887654

>d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Phenylcoumaran benzylic ether reductase
species: Loblolly pine (Pinus taeda) [TaxId: 3352]

Probab=99.07  E-value=6.7e-10  Score=90.57  Aligned_cols=81  Identities=19%  Similarity=0.240  Sum_probs=61.8

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHH--HHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCC
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKD--VKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHH   78 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~--~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g   78 (251)
                      |+||||||+|.||++++++|.+.|++|++++|+......  ....+... ....+.++.+|+.+.....+.++       
T Consensus         4 kKILVtGatG~iG~~l~~~L~~~G~~V~~l~R~~~~~~~~~~~~~~~~~-~~~~~~~~~~d~~~~~~~~~~~~-------   75 (307)
T d1qyca_           4 SRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESF-KASGANIVHGSIDDHASLVEAVK-------   75 (307)
T ss_dssp             CCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCCCTTTTHHHHHHHHHH-HTTTCEEECCCTTCHHHHHHHHH-------
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCeEEEEECCCccccchhHHHHHHhh-ccCCcEEEEeecccchhhhhhhh-------
Confidence            679999999999999999999999999999997554221  11112221 14568889999999988877665       


Q ss_pred             CeeEEEEcCCC
Q 025509           79 QLNILINNAGI   89 (251)
Q Consensus        79 ~id~lv~~ag~   89 (251)
                      ..+.++++++.
T Consensus        76 ~~~~vi~~~~~   86 (307)
T d1qyca_          76 NVDVVISTVGS   86 (307)
T ss_dssp             TCSEEEECCCG
T ss_pred             hceeeeecccc
Confidence            57889998874

>d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Negative transcriptional regulator NmrA
species: Aspergillus nidulans [TaxId: 162425]

Probab=99.04  E-value=4e-09  Score=88.61  Aligned_cols=76  Identities=21%  Similarity=0.202  Sum_probs=57.1

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHH-HHHHHHHHhcCCC
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASV-RNFASEYNIQHHQ   79 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i-~~~~~~~~~~~g~   79 (251)
                      |+|+||||+|.||++++++|+++|++|+++.|+..+...  ..+..   ...+.++++|+.|..++ ..++       ..
T Consensus         4 ktIlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~--~~~~~---~~~v~~~~gD~~d~~~~~~~a~-------~~   71 (350)
T d1xgka_           4 KTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLIA--EELQA---IPNVTLFQGPLLNNVPLMDTLF-------EG   71 (350)
T ss_dssp             CCEEEESTTSHHHHHHHHHHHHTTCCEEEEESCSCSHHH--HHHHT---STTEEEEESCCTTCHHHHHHHH-------TT
T ss_pred             CEEEEECCChHHHHHHHHHHHhCCCeEEEEECCcchhhh--hhhcc---cCCCEEEEeeCCCcHHHHHHHh-------cC
Confidence            689999999999999999999999999999998766432  12211   34689999999986653 3222       25


Q ss_pred             eeEEEEcCC
Q 025509           80 LNILINNAG   88 (251)
Q Consensus        80 id~lv~~ag   88 (251)
                      .|.++.+..
T Consensus        72 ~~~~~~~~~   80 (350)
T d1xgka_          72 AHLAFINTT   80 (350)
T ss_dssp             CSEEEECCC
T ss_pred             CceEEeecc
Confidence            677776654

>d1jaya_ c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Coenzyme F420H2:NADP+ oxidoreductase (FNO)
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=99.01  E-value=2.2e-14  Score=111.38  Aligned_cols=49  Identities=22%  Similarity=0.285  Sum_probs=44.6

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCC
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIP   49 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~   49 (251)
                      |+|.|+||+|+||+++|+.|++.|++|++.+|++++++++.+++.+..+
T Consensus         1 Mki~vigGaG~iG~alA~~la~~G~~V~l~~R~~e~~~~l~~~i~~~~~   49 (212)
T d1jaya_           1 MRVALLGGTGNLGKGLALRLATLGHEIVVGSRREEKAEAKAAEYRRIAG   49 (212)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSHHHHHHHHHHHHHHHS
T ss_pred             CEEEEEeCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCC
Confidence            6788999999999999999999999999999999999999998876543

>d1e5qa1 c.2.1.3 (A:2-124,A:392-450) Saccharopine reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Saccharopine reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=98.08  E-value=7e-06  Score=61.24  Aligned_cols=73  Identities=16%  Similarity=0.305  Sum_probs=53.8

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      |+|+|.|+ |.+|+.+|+.|+++|++|++++|+.+++++..+.+      ........+..........+.       ..
T Consensus         3 K~IliiGa-G~~G~~~a~~L~~~g~~V~v~dr~~~~a~~l~~~~------~~~~~~~~~~~~~~~~~~~i~-------~~   68 (182)
T d1e5qa1           3 KSVLMLGS-GFVTRPTLDVLTDSGIKVTVACRTLESAKKLSAGV------QHSTPISLDVNDDAALDAEVA-------KH   68 (182)
T ss_dssp             CEEEEECC-STTHHHHHHHHHTTTCEEEEEESCHHHHHHHHTTC------TTEEEEECCTTCHHHHHHHHT-------TS
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCEEEEEECChHHHHHHHhcc------cccccccccccchhhhHhhhh-------cc
Confidence            68999986 99999999999999999999999998888765432      234445556666666555443       45


Q ss_pred             eEEEEcC
Q 025509           81 NILINNA   87 (251)
Q Consensus        81 d~lv~~a   87 (251)
                      |.++...
T Consensus        69 ~~~i~~~   75 (182)
T d1e5qa1          69 DLVISLI   75 (182)
T ss_dssp             SEEEECS
T ss_pred             ceeEeec
Confidence            6666544

>d1vi2a1 c.2.1.7 (A:107-288) Putative shikimate dehydrogenase YdiB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Putative shikimate dehydrogenase YdiB
species: Escherichia coli [TaxId: 562]

Probab=98.05  E-value=1.5e-05  Score=60.15  Aligned_cols=79  Identities=16%  Similarity=0.156  Sum_probs=60.1

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCC-EEEEEecCchhHHHHHH---HHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhc
Q 025509            1 MDIVITGATSGIGTETARVLALRGV-HVVMGVRDIAAGKDVKE---TIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQ   76 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~-~Vi~~~r~~~~~~~~~~---~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~   76 (251)
                      |+|+|.|+ ||.|++++..|.+.|. +++++.|+.+..+++..   .+....   .......|+.+.+++.....     
T Consensus        19 k~vlIlGa-GGaarai~~al~~~g~~~i~i~nR~~~~~~~~~~l~~~~~~~~---~~~~~~~~~~~~~~~~~~~~-----   89 (182)
T d1vi2a1          19 KTMVLLGA-GGASTAIGAQGAIEGLKEIKLFNRRDEFFDKALAFAQRVNENT---DCVVTVTDLADQQAFAEALA-----   89 (182)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHHS---SCEEEEEETTCHHHHHHHHH-----
T ss_pred             CEEEEECC-cHHHHHHHHHHhhcCCceEeeeccchHHHHHHHHHHHHHHhhc---CcceEeeecccccchhhhhc-----
Confidence            57999988 6999999999999998 78999999877666544   333332   34455778988887766543     


Q ss_pred             CCCeeEEEEcCCCC
Q 025509           77 HHQLNILINNAGIM   90 (251)
Q Consensus        77 ~g~id~lv~~ag~~   90 (251)
                        ..|++||+....
T Consensus        90 --~~diiIN~Tp~G  101 (182)
T d1vi2a1          90 --SADILTNGTKVG  101 (182)
T ss_dssp             --TCSEEEECSSTT
T ss_pred             --ccceeccccCCc
Confidence              679999998753

>d1v3va2 c.2.1.1 (A:113-294) Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase {Guinea pig (Cavia porcellus) [TaxId: 10141]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase
species: Guinea pig (Cavia porcellus) [TaxId: 10141]

Probab=98.04  E-value=9e-06  Score=61.40  Aligned_cols=77  Identities=14%  Similarity=0.246  Sum_probs=53.3

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      ++|||+||++|+|.+.++.....|++|+.+++++++.+...+     . +....+   |-.+.+..+...+..  ...++
T Consensus        31 ~~VlV~ga~ggvG~~aiqlak~~Ga~vi~~~~~~~~~~~~~~-----~-Ga~~vi---~~~~~~~~~~~~~~~--~~~Gv   99 (182)
T d1v3va2          31 ETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKIAYLKQ-----I-GFDAAF---NYKTVNSLEEALKKA--SPDGY   99 (182)
T ss_dssp             CEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH-----T-TCSEEE---ETTSCSCHHHHHHHH--CTTCE
T ss_pred             CEEEEEeCCCchhHHHHHHHHccCCEEEEeCCCHHHHHHHHh-----h-hhhhhc---ccccccHHHHHHHHh--hcCCC
Confidence            479999999999999999999999999999998766544332     1 333332   333333333333332  22479


Q ss_pred             eEEEEcCC
Q 025509           81 NILINNAG   88 (251)
Q Consensus        81 d~lv~~ag   88 (251)
                      |+++.+.|
T Consensus       100 d~v~D~vG  107 (182)
T d1v3va2         100 DCYFDNVG  107 (182)
T ss_dssp             EEEEESSC
T ss_pred             ceeEEecC
Confidence            99999997

>d1yb5a2 c.2.1.1 (A:121-294) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.03  E-value=1.4e-05  Score=59.87  Aligned_cols=77  Identities=13%  Similarity=0.237  Sum_probs=53.5

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      ++|||+||+|++|.+.++.+...|++|+.+++++++.+.+. +    . +..- +  .|.++.+-.+++.+...  ..++
T Consensus        30 ~~VlV~Ga~G~vG~~aiq~a~~~G~~vi~~~~~~~~~~~~~-~----~-Ga~~-v--i~~~~~~~~~~i~~~t~--~~g~   98 (174)
T d1yb5a2          30 ESVLVHGASGGVGLAACQIARAYGLKILGTAGTEEGQKIVL-Q----N-GAHE-V--FNHREVNYIDKIKKYVG--EKGI   98 (174)
T ss_dssp             CEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH-H----T-TCSE-E--EETTSTTHHHHHHHHHC--TTCE
T ss_pred             CEEEEEeccccccccccccccccCccccccccccccccccc-c----c-Cccc-c--cccccccHHHHhhhhhc--cCCc
Confidence            37999999999999999988889999999998876654432 2    2 3322 2  36666544444333332  2369


Q ss_pred             eEEEEcCC
Q 025509           81 NILINNAG   88 (251)
Q Consensus        81 d~lv~~ag   88 (251)
                      |+++.+.|
T Consensus        99 d~v~d~~g  106 (174)
T d1yb5a2          99 DIIIEMLA  106 (174)
T ss_dssp             EEEEESCH
T ss_pred             eEEeeccc
Confidence            99999886

>d1lssa_ c.2.1.9 (A:) Ktn Mja218 {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn Mja218
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=98.03  E-value=8.6e-06  Score=58.20  Aligned_cols=73  Identities=18%  Similarity=0.235  Sum_probs=57.7

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      |.|+|.|+ |.+|+.+++.|.+.|+.|++++++++..+++.++       ....++..|.++++.++++      .....
T Consensus         1 M~IvI~G~-G~~G~~la~~L~~~g~~v~vid~d~~~~~~~~~~-------~~~~vi~Gd~~~~~~l~~~------~i~~a   66 (132)
T d1lssa_           1 MYIIIAGI-GRVGYTLAKSLSEKGHDIVLIDIDKDICKKASAE-------IDALVINGDCTKIKTLEDA------GIEDA   66 (132)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH-------CSSEEEESCTTSHHHHHHT------TTTTC
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCCCcceecCChhhhhhhhhh-------hhhhhccCcccchhhhhhc------Chhhh
Confidence            67999998 9999999999999999999999998887765442       2467888999998877653      11256


Q ss_pred             eEEEEcC
Q 025509           81 NILINNA   87 (251)
Q Consensus        81 d~lv~~a   87 (251)
                      |.++...
T Consensus        67 ~~vv~~t   73 (132)
T d1lssa_          67 DMYIAVT   73 (132)
T ss_dssp             SEEEECC
T ss_pred             hhhcccC
Confidence            7777654

>d1gu7a2 c.2.1.1 (A:161-349) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: 2,4-dienoyl-CoA reductase
species: Yeast (Candida tropicalis) [TaxId: 5482]

Probab=97.93  E-value=1.9e-05  Score=60.00  Aligned_cols=84  Identities=18%  Similarity=0.205  Sum_probs=55.4

Q ss_pred             EEEE-ECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHH-HhcCCC
Q 025509            2 DIVI-TGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEY-NIQHHQ   79 (251)
Q Consensus         2 ~vlI-tG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~-~~~~g~   79 (251)
                      +++| +||+|++|.+.++.....|++|+.+.|+.+..++..+.+++.  +....+. .|-.+..++...+.++ ....++
T Consensus        31 ~vli~~ga~g~vG~~aiqlAk~~Ga~vI~~v~~~~~~~~~~~~~~~l--Gad~vi~-~~~~~~~~~~~~v~~~~~~~g~~  107 (189)
T d1gu7a2          31 DWFIQNGGTSAVGKYASQIGKLLNFNSISVIRDRPNLDEVVASLKEL--GATQVIT-EDQNNSREFGPTIKEWIKQSGGE  107 (189)
T ss_dssp             CEEEESCTTSHHHHHHHHHHHHHTCEEEEEECCCTTHHHHHHHHHHH--TCSEEEE-HHHHHCGGGHHHHHHHHHHHTCC
T ss_pred             EEEEEeCCCchHHHHHHHHHhhcCCeEEEEEecccccchHHhhhhhc--cccEEEe-ccccchhHHHHHHHHHHhhccCC
Confidence            3555 699999999999988888999999999888877777666554  3333222 1111112233333333 234567


Q ss_pred             eeEEEEcCC
Q 025509           80 LNILINNAG   88 (251)
Q Consensus        80 id~lv~~ag   88 (251)
                      +|+++.+.|
T Consensus       108 vdvv~D~vg  116 (189)
T d1gu7a2         108 AKLALNCVG  116 (189)
T ss_dssp             EEEEEESSC
T ss_pred             ceEEEECCC
Confidence            999999886

>d1hyha1 c.2.1.5 (A:21-166) L-2-hydroxyisocapronate dehydrogenase, L-HICDH {Lactobacillus confusus [TaxId: 1583]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: L-2-hydroxyisocapronate dehydrogenase, L-HICDH
species: Lactobacillus confusus [TaxId: 1583]

Probab=97.93  E-value=3.4e-05  Score=56.05  Aligned_cols=118  Identities=17%  Similarity=0.162  Sum_probs=74.5

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCC--EEEEEecCchhHHHHHHHHHhhCC--CCceEEEEecCCCHHHHHHHHHHHHhc
Q 025509            1 MDIVITGATSGIGTETARVLALRGV--HVVMGVRDIAAGKDVKETIVKEIP--SAKVDAMELDLSSLASVRNFASEYNIQ   76 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~--~Vi~~~r~~~~~~~~~~~~~~~~~--~~~v~~~~~D~~~~~~i~~~~~~~~~~   76 (251)
                      |+|.|+|+ |.+|.++|-.|+.+|.  +++++++++++++.....+.+...  .........|   .+++          
T Consensus         2 kKI~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~~~~g~~~Dl~~a~~~~~~~~~~~~~d---~~~l----------   67 (146)
T d1hyha1           2 RKIGIIGL-GNVGAAVAHGLIAQGVADDYVFIDANEAKVKADQIDFQDAMANLEAHGNIVIND---WAAL----------   67 (146)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSSSCCEEEESC---GGGG----------
T ss_pred             CeEEEECc-CHHHHHHHHHHHhcCCCceEEEEecccchhhhHHHhhhccccccCCccceeccC---HHHh----------
Confidence            57889995 9999999999999884  899999999887776666665422  2233333333   2222          


Q ss_pred             CCCeeEEEEcCCCCCCCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcC
Q 025509           77 HHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSS  141 (251)
Q Consensus        77 ~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS  141 (251)
                       ..-|++|.+||...+..+-+-++-.+.++.|    ..+++...+.+.+.    ++.+.++++|-
T Consensus        68 -~~adiVVitaG~~~~~~~~~g~~R~~l~~~N----~~i~~~i~~~i~~~----~p~aivivvtN  123 (146)
T d1hyha1          68 -ADADVVISTLGNIKLQQDNPTGDRFAELKFT----SSMVQSVGTNLKES----GFHGVLVVISN  123 (146)
T ss_dssp             -TTCSEEEECCSCGGGTC-------CTTHHHH----HHHHHHHHHHHHHT----TCCSEEEECSS
T ss_pred             -ccccEEEEeccccccccccCCccHHHHHHHH----HHHHHHHHHHHhhc----CCCeEEEEecC
Confidence             2689999999965422111111112234444    35567777777665    35677887775

>d1qora2 c.2.1.1 (A:113-291) Quinone oxidoreductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Escherichia coli [TaxId: 562]

Probab=97.89  E-value=2.8e-05  Score=58.21  Aligned_cols=77  Identities=12%  Similarity=0.189  Sum_probs=55.2

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      ++|||+||++++|..+++.....|++|+.+++++++.+.+. ++     +...   ..|.++.+-.+++ .++- ....+
T Consensus        30 ~~Vlv~ga~g~vG~~~iqlak~~Ga~Vi~~~~s~~k~~~~~-~l-----Ga~~---vi~~~~~d~~~~v-~~~t-~g~g~   98 (179)
T d1qora2          30 EQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQSAL-KA-----GAWQ---VINYREEDLVERL-KEIT-GGKKV   98 (179)
T ss_dssp             CEEEESSTTBHHHHHHHHHHHHHTCEEEEEESSHHHHHHHH-HH-----TCSE---EEETTTSCHHHHH-HHHT-TTCCE
T ss_pred             CEEEEEccccccchHHHHHHHHhCCeEeecccchHHHHHHH-hc-----CCeE---EEECCCCCHHHHH-HHHh-CCCCe
Confidence            47999999999999999999899999999999988765543 23     4332   2366664444443 3332 23479


Q ss_pred             eEEEEcCC
Q 025509           81 NILINNAG   88 (251)
Q Consensus        81 d~lv~~ag   88 (251)
                      |+++.+.|
T Consensus        99 d~v~d~~g  106 (179)
T d1qora2          99 RVVYDSVG  106 (179)
T ss_dssp             EEEEECSC
T ss_pred             EEEEeCcc
Confidence            99999987

>d1gpja2 c.2.1.7 (A:144-302) Glutamyl tRNA-reductase middle domain {Archaeon Methanopyrus kandleri [TaxId: 2320]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamyl tRNA-reductase middle domain
species: Archaeon Methanopyrus kandleri [TaxId: 2320]

Probab=97.85  E-value=6.2e-05  Score=55.45  Aligned_cols=80  Identities=15%  Similarity=0.347  Sum_probs=57.3

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCC-EEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCC
Q 025509            1 MDIVITGATSGIGTETARVLALRGV-HVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQ   79 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~   79 (251)
                      +++||.|+ |++|..+++.|...|+ ++.++.|+.+++++..+++     +..  +.     ..+++.+.+.       .
T Consensus        25 ~~ilviGa-G~~g~~v~~~L~~~g~~~i~v~nRt~~ka~~l~~~~-----~~~--~~-----~~~~~~~~l~-------~   84 (159)
T d1gpja2          25 KTVLVVGA-GEMGKTVAKSLVDRGVRAVLVANRTYERAVELARDL-----GGE--AV-----RFDELVDHLA-------R   84 (159)
T ss_dssp             CEEEEESC-CHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHHH-----TCE--EC-----CGGGHHHHHH-------T
T ss_pred             CeEEEECC-CHHHHHHHHHHHhcCCcEEEEEcCcHHHHHHHHHhh-----hcc--cc-----cchhHHHHhc-------c
Confidence            57999998 9999999999999998 6999999988888877765     322  11     2333333332       7


Q ss_pred             eeEEEEcCCCCCCCCcCCchhhH
Q 025509           80 LNILINNAGIMGTPFMLSKDNIE  102 (251)
Q Consensus        80 id~lv~~ag~~~~~~~~~~~~~~  102 (251)
                      .|+||++.+...+.  ++.+.++
T Consensus        85 ~Divi~atss~~~i--i~~~~i~  105 (159)
T d1gpja2          85 SDVVVSATAAPHPV--IHVDDVR  105 (159)
T ss_dssp             CSEEEECCSSSSCC--BCHHHHH
T ss_pred             CCEEEEecCCCCcc--ccHhhhH
Confidence            89999999864443  3444433

>d1e3ja2 c.2.1.1 (A:143-312) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]

Probab=97.84  E-value=4.7e-05  Score=56.47  Aligned_cols=79  Identities=18%  Similarity=0.181  Sum_probs=52.6

Q ss_pred             EEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcC-CCe
Q 025509            2 DIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQH-HQL   80 (251)
Q Consensus         2 ~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~-g~i   80 (251)
                      +|+|+| +|+||...+..+...|++|+++++++.+.+.+.+ +     +....+. .|-. .++.....+++.+.. ..+
T Consensus        29 ~vlV~G-~G~vG~~~~~~ak~~Ga~vi~v~~~~~r~~~a~~-~-----ga~~~~~-~~~~-~~~~~~~~~~~~~~~g~g~   99 (170)
T d1e3ja2          29 TVLVIG-AGPIGLVSVLAAKAYGAFVVCTARSPRRLEVAKN-C-----GADVTLV-VDPA-KEEESSIIERIRSAIGDLP   99 (170)
T ss_dssp             EEEEEC-CSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH-T-----TCSEEEE-CCTT-TSCHHHHHHHHHHHSSSCC
T ss_pred             EEEEEc-ccccchhhHhhHhhhcccccccchHHHHHHHHHH-c-----CCcEEEe-cccc-ccccchhhhhhhcccccCC
Confidence            689997 6899999999888899999999999887655433 2     3333332 2222 122233333443333 379


Q ss_pred             eEEEEcCCC
Q 025509           81 NILINNAGI   89 (251)
Q Consensus        81 d~lv~~ag~   89 (251)
                      |++|.++|.
T Consensus       100 D~vid~~g~  108 (170)
T d1e3ja2         100 NVTIDCSGN  108 (170)
T ss_dssp             SEEEECSCC
T ss_pred             ceeeecCCC
Confidence            999999983

>d1pqwa_ c.2.1.1 (A:) Putative enoyl reductase domain of polyketide synthase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative enoyl reductase domain of polyketide synthase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=97.82  E-value=3.1e-05  Score=58.11  Aligned_cols=77  Identities=14%  Similarity=0.221  Sum_probs=52.1

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      ++|||+||+|++|...++.+...|++|+++++++++.+.+.    + . +... +  .|..+.+-.+.+ .+... ..++
T Consensus        27 ~~VlI~ga~g~vG~~~iqla~~~g~~vi~~~~~~~~~~~l~----~-~-Ga~~-v--i~~~~~~~~~~v-~~~t~-~~g~   95 (183)
T d1pqwa_          27 ERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAKREMLS----R-L-GVEY-V--GDSRSVDFADEI-LELTD-GYGV   95 (183)
T ss_dssp             CEEEETTTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHH----T-T-CCSE-E--EETTCSTHHHHH-HHHTT-TCCE
T ss_pred             CEEEEECCCCCcccccchhhccccccceeeecccccccccc----c-c-cccc-c--ccCCccCHHHHH-HHHhC-CCCE
Confidence            37999999999999999988889999999999876644322    2 2 3332 2  355554333332 22221 2369


Q ss_pred             eEEEEcCC
Q 025509           81 NILINNAG   88 (251)
Q Consensus        81 d~lv~~ag   88 (251)
                      |+++.+.|
T Consensus        96 d~v~d~~g  103 (183)
T d1pqwa_          96 DVVLNSLA  103 (183)
T ss_dssp             EEEEECCC
T ss_pred             EEEEeccc
Confidence            99999997

>d1ez4a1 c.2.1.5 (A:16-162) Lactate dehydrogenase {Lactobacillus pentosus [TaxId: 1589]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Lactobacillus pentosus [TaxId: 1589]

Probab=97.76  E-value=0.00043  Score=50.00  Aligned_cols=114  Identities=13%  Similarity=0.146  Sum_probs=70.5

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcC--CEEEEEecCchhHHHHHHHHHhhCC-CCceEEEEecCCCHHHHHHHHHHHHhcC
Q 025509            1 MDIVITGATSGIGTETARVLALRG--VHVVMGVRDIAAGKDVKETIVKEIP-SAKVDAMELDLSSLASVRNFASEYNIQH   77 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G--~~Vi~~~r~~~~~~~~~~~~~~~~~-~~~v~~~~~D~~~~~~i~~~~~~~~~~~   77 (251)
                      ++|.|.|+ |.+|.++|..|+.+|  .+|+++++++++++.....+..... .........|.   +           ..
T Consensus         6 ~KI~IIGa-G~VG~~~A~~l~~~~~~~elvL~D~~~~~~~g~a~Dl~~a~~~~~~~~~~~~d~---~-----------~~   70 (146)
T d1ez4a1           6 QKVVLVGD-GAVGSSYAFAMAQQGIAEEFVIVDVVKDRTKGDALDLEDAQAFTAPKKIYSGEY---S-----------DC   70 (146)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHGGGGGSCCCEEEECCG---G-----------GG
T ss_pred             CEEEEECC-CHHHHHHHHHHHhcCCCcEEEEeecccchhHHHHHHHhccccccCCceEeeccH---H-----------Hh
Confidence            46888995 999999999999988  4899999998877766666654221 22334444443   1           12


Q ss_pred             CCeeEEEEcCCCCCCCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcC
Q 025509           78 HQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSS  141 (251)
Q Consensus        78 g~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS  141 (251)
                      ...|++|.+||....+.    +.-.+.+..|.    .+++...+.+.+.    ++.+.++++|.
T Consensus        71 ~~adivvitag~~~~~g----~~r~~l~~~N~----~i~~~~~~~i~~~----~p~aivivvtN  122 (146)
T d1ez4a1          71 KDADLVVITAGAPQKPG----ESRLDLVNKNL----NILSSIVKPVVDS----GFDGIFLVAAN  122 (146)
T ss_dssp             TTCSEEEECCCC--------------CHHHHH----HHHHHHHHHHHHT----TCCSEEEECSS
T ss_pred             ccccEEEEecccccCCC----CCHHHHHHHHH----HHHHHHHHHHhhc----CCCcEEEEeCC
Confidence            37899999999643321    11223344553    4556666666664    35677777765

>d1mlda1 c.2.1.5 (A:1-144) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=97.76  E-value=0.00051  Score=49.44  Aligned_cols=115  Identities=16%  Similarity=0.172  Sum_probs=68.8

Q ss_pred             EEEEECCCChhHHHHHHHHHHcCC--EEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCC
Q 025509            2 DIVITGATSGIGTETARVLALRGV--HVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQ   79 (251)
Q Consensus         2 ~vlItG~s~gIG~a~a~~l~~~G~--~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~   79 (251)
                      +|.|+||+|.+|.++|-.|+.+|.  ++++++.++.+.+  ...+....   .......-+. ..+..+   .+    ..
T Consensus         2 Kv~IiGA~G~VG~~~A~~l~~~~~~~elvLiDi~~~~~~--a~Dl~~~~---~~~~~~~~~~-~~~~~~---~~----~~   68 (144)
T d1mlda1           2 KVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAHTPGV--AADLSHIE---TRATVKGYLG-PEQLPD---CL----KG   68 (144)
T ss_dssp             EEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSSHHHH--HHHHTTSS---SSCEEEEEES-GGGHHH---HH----TT
T ss_pred             eEEEECCCChHHHHHHHHHHhCCccceEEEEeccccchh--hHHHhhhh---hhcCCCeEEc-CCChHH---Hh----CC
Confidence            588999999999999999999885  7999998764433  22332221   1111111111 222222   12    27


Q ss_pred             eeEEEEcCCCCCCCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcC
Q 025509           80 LNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSS  141 (251)
Q Consensus        80 id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS  141 (251)
                      .|++|..||....+.+ +.   .+.++.|..-    ++...+.+.+.    ++.+.++++|.
T Consensus        69 aDivVitag~~~~~g~-sR---~~ll~~N~~i----~~~i~~~i~~~----~p~~iiivvtN  118 (144)
T d1mlda1          69 CDVVVIPAGVPRKPGM-TR---DDLFNTNATI----VATLTAACAQH----CPDAMICIISN  118 (144)
T ss_dssp             CSEEEECCSCCCCTTC-CG---GGGHHHHHHH----HHHHHHHHHHH----CTTSEEEECSS
T ss_pred             CCEEEECCCcCCCCCC-Cc---chHHHHHHHH----HHHHHHHHHhc----CCCeEEEEecC
Confidence            8999999997543322 22   2336666544    45555565554    35678888876

>d1o8ca2 c.2.1.1 (A:116-192) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=97.75  E-value=3.2e-05  Score=49.73  Aligned_cols=40  Identities=28%  Similarity=0.390  Sum_probs=35.1

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHH
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDV   40 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~   40 (251)
                      +++||+||+||+|...++.+...|++|+.+.+++++.+-+
T Consensus        33 ~~vlI~gasGgVG~~aiQlak~~G~~Vi~~t~s~~k~~~~   72 (77)
T d1o8ca2          33 GEIVVTGASGGVGSTAVALLHKLGYQVVAVSGRESTHEYL   72 (77)
T ss_dssp             CEEEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHHHH
T ss_pred             CcEEEEeCCCcHHHHHHHHHHHcCCeEEEEECCHHHHHHH
Confidence            3699999999999999998888899999999988776554

>d1xa0a2 c.2.1.1 (A:119-294) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: B. subtilis YhfP homologue
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=97.75  E-value=4.4e-05  Score=57.25  Aligned_cols=76  Identities=20%  Similarity=0.258  Sum_probs=50.4

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      ++|||+||+||+|.+.++.....|++|+.+++++++.+.+.+ +     +.+..+   |-.+.  ..+....+  ..+++
T Consensus        33 ~~VLI~gaaGGVG~~aiQlak~~Ga~Viat~~s~~k~~~~~~-l-----Ga~~vi---~~~~~--~~~~~~~~--~~~gv   99 (176)
T d1xa0a2          33 GPVLVTGATGGVGSLAVSMLAKRGYTVEASTGKAAEHDYLRV-L-----GAKEVL---AREDV--MAERIRPL--DKQRW   99 (176)
T ss_dssp             CCEEESSTTSHHHHHHHHHHHHTTCCEEEEESCTTCHHHHHH-T-----TCSEEE---ECC-----------C--CSCCE
T ss_pred             CEEEEEeccchHHHHHHHHHHHcCCceEEecCchHHHHHHHh-c-----ccceee---ecchh--HHHHHHHh--hccCc
Confidence            369999999999999999888899999999999888655432 2     343322   32221  12222221  23489


Q ss_pred             eEEEEcCCC
Q 025509           81 NILINNAGI   89 (251)
Q Consensus        81 d~lv~~ag~   89 (251)
                      |+++.+.|.
T Consensus       100 D~vid~vgg  108 (176)
T d1xa0a2         100 AAAVDPVGG  108 (176)
T ss_dssp             EEEEECSTT
T ss_pred             CEEEEcCCc
Confidence            999999983

>d1hyea1 c.2.1.5 (A:1-145) MJ0490, lactate/malate dehydrogenase {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: MJ0490, lactate/malate dehydrogenase
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=97.75  E-value=0.00081  Score=48.41  Aligned_cols=116  Identities=18%  Similarity=0.214  Sum_probs=68.9

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCC--EEEEEecCch--hHHHHHHHHHhhCC--CCceEEEEecCCCHHHHHHHHHHHH
Q 025509            1 MDIVITGATSGIGTETARVLALRGV--HVVMGVRDIA--AGKDVKETIVKEIP--SAKVDAMELDLSSLASVRNFASEYN   74 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~--~Vi~~~r~~~--~~~~~~~~~~~~~~--~~~v~~~~~D~~~~~~i~~~~~~~~   74 (251)
                      +.|.|+||+|.+|.++|..|+.+|.  ++++++++++  +++.....+.....  ...+.....--.+.+          
T Consensus         1 MKV~IiGA~G~VG~~~a~~l~~~~l~~el~L~D~~~~~~~~~g~a~Dl~~~~~~~~~~~~~~~~~~~d~~----------   70 (145)
T d1hyea1           1 MKVTIIGASGRVGSATALLLAKEPFMKDLVLIGREHSINKLEGLREDIYDALAGTRSDANIYVESDENLR----------   70 (145)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHTCTTCCEEEEEECGGGHHHHHHHHHHHHHHHTTSCCCCEEEEEETTCGG----------
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCcccccccccchhhhHhhhcccccchhcccccccCCccccCCcchHH----------
Confidence            5789999999999999999999984  8999998753  34444445544211  122222211111221          


Q ss_pred             hcCCCeeEEEEcCCCCCCCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEc
Q 025509           75 IQHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVS  140 (251)
Q Consensus        75 ~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vs  140 (251)
                       .....|++|.+||....+.+ +   =.+.++.|.    .+++...+.+.+.     ....|+.+|
T Consensus        71 -~l~~aDvVVitAG~~~~~g~-s---R~dl~~~Na----~iv~~i~~~i~~~-----~~~~iivVt  122 (145)
T d1hyea1          71 -IIDESDVVIITSGVPRKEGM-S---RMDLAKTNA----KIVGKYAKKIAEI-----CDTKIFVIT  122 (145)
T ss_dssp             -GGTTCSEEEECCSCCCCTTC-C---HHHHHHHHH----HHHHHHHHHHHHH-----CCCEEEECS
T ss_pred             -HhccceEEEEecccccCCCC-C---hhhhhhhhH----HHHHHHHHHHhcc-----CCCeEEEEc
Confidence             12378999999997543221 2   233455554    3456666666554     233455554

>d1a5za1 c.2.1.5 (A:22-163) Lactate dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=97.72  E-value=0.00036  Score=50.04  Aligned_cols=114  Identities=19%  Similarity=0.252  Sum_probs=74.4

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCC--EEEEEecCchhHHHHHHHHHhhCC-CCceEEEEecCCCHHHHHHHHHHHHhcC
Q 025509            1 MDIVITGATSGIGTETARVLALRGV--HVVMGVRDIAAGKDVKETIVKEIP-SAKVDAMELDLSSLASVRNFASEYNIQH   77 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~--~Vi~~~r~~~~~~~~~~~~~~~~~-~~~v~~~~~D~~~~~~i~~~~~~~~~~~   77 (251)
                      +++.|.|+ |.+|.++|..++.++.  ++++.++++++++.....+....+ .........|   .+++           
T Consensus         1 mKI~IIGa-G~VG~~~a~~l~~~~l~~el~L~Di~~~~~~g~~~Dl~~~~~~~~~~~~~~~~---~~~~-----------   65 (140)
T d1a5za1           1 MKIGIVGL-GRVGSSTAFALLMKGFAREMVLIDVDKKRAEGDALDLIHGTPFTRRANIYAGD---YADL-----------   65 (140)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSCCCEEEECC---GGGG-----------
T ss_pred             CEEEEECc-CHHHHHHHHHHHhCCCCCEEEEEecccccccchhccccccccccccccccCCc---HHHh-----------
Confidence            46788896 8999999999998874  899999998887766666655322 2233333322   2222           


Q ss_pred             CCeeEEEEcCCCCCCCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcC
Q 025509           78 HQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSS  141 (251)
Q Consensus        78 g~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS  141 (251)
                      ...|++|.+||....+.+ +   -.+.+..|    ..+++...+.+.+.    ++.+.++++|.
T Consensus        66 ~~adivvitag~~~~~g~-~---r~dl~~~N----~~I~~~i~~~i~~~----~p~aivivvtN  117 (140)
T d1a5za1          66 KGSDVVIVAAGVPQKPGE-T---RLQLLGRN----ARVMKEIARNVSKY----APDSIVIVVTN  117 (140)
T ss_dssp             TTCSEEEECCCCCCCSSC-C---HHHHHHHH----HHHHHHHHHHHHHH----CTTCEEEECSS
T ss_pred             cCCCEEEEecccccCCCc-c---hhhhhccc----cchHHHHHHHHHhc----CCCcEEEEeCC
Confidence            268999999997543321 1   12334445    34567777777776    35677777775

>d1ldna1 c.2.1.5 (A:15-162) Lactate dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=97.72  E-value=0.0014  Score=47.25  Aligned_cols=113  Identities=14%  Similarity=0.152  Sum_probs=74.2

Q ss_pred             EEEEECCCChhHHHHHHHHHHcCC--EEEEEecCchhHHHHHHHHHhhCC--CCceEEEEecCCCHHHHHHHHHHHHhcC
Q 025509            2 DIVITGATSGIGTETARVLALRGV--HVVMGVRDIAAGKDVKETIVKEIP--SAKVDAMELDLSSLASVRNFASEYNIQH   77 (251)
Q Consensus         2 ~vlItG~s~gIG~a~a~~l~~~G~--~Vi~~~r~~~~~~~~~~~~~~~~~--~~~v~~~~~D~~~~~~i~~~~~~~~~~~   77 (251)
                      +|.|+|+ |.+|.++|..|+.+|.  +++++++++++++.....+.....  ...+.+...|.   +           ..
T Consensus         8 KI~IiGa-G~vG~~~a~~l~~~~l~~el~L~Di~~~~~~g~a~Dl~~~~~~~~~~~~~~~~d~---~-----------~l   72 (148)
T d1ldna1           8 RVVVIGA-GFVGASYVFALMNQGIADEIVLIDANESKAIGDAMDFNHGKVFAPKPVDIWHGDY---D-----------DC   72 (148)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHTTSSSSCCEEEECCG---G-----------GT
T ss_pred             eEEEECc-CHHHHHHHHHHHhcCCCceEEEEeeccccccchhccHhhCccccCCCeEEEECCH---H-----------Hh
Confidence            5888896 9999999999999885  799999998887777766765422  22344433332   1           12


Q ss_pred             CCeeEEEEcCCCCCCCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcC
Q 025509           78 HQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSS  141 (251)
Q Consensus        78 g~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS  141 (251)
                      ...|++|.++|....+.+..    .+.+..|    ..+++...+.+.+.    ++.+.++++|.
T Consensus        73 ~daDvvvitag~~~~~~~~R----~dl~~~N----~~i~~~i~~~i~~~----~p~a~~ivvtN  124 (148)
T d1ldna1          73 RDADLVVICAGANQKPGETR----LDLVDKN----IAIFRSIVESVMAS----GFQGLFLVATN  124 (148)
T ss_dssp             TTCSEEEECCSCCCCTTTCS----GGGHHHH----HHHHHHHHHHHHHH----TCCSEEEECSS
T ss_pred             ccceeEEEecccccccCcch----hHHHHHH----HHHHHHHHHHHHhh----CCCceEEEecC
Confidence            36899999999754332222    2223444    34455666666665    35678888775

>d1vj0a2 c.2.1.1 (A:156-337) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein TM0436
species: Thermotoga maritima [TaxId: 2336]

Probab=97.68  E-value=0.00026  Score=52.96  Aligned_cols=80  Identities=16%  Similarity=0.175  Sum_probs=52.2

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCC-EEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCC
Q 025509            1 MDIVITGATSGIGTETARVLALRGV-HVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQ   79 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~   79 (251)
                      .+|||+|+ |+||...+..+...|+ +|+++++++++.+-+. ++     +... ++...-.+..+..+.+.++.. ..+
T Consensus        30 ~~VlV~Ga-G~iG~~~~~~ak~~Ga~~Vi~~~~~~~~~~~a~-~l-----Ga~~-vi~~~~~~~~~~~~~i~~~~~-~~g  100 (182)
T d1vj0a2          30 KTVVIQGA-GPLGLFGVVIARSLGAENVIVIAGSPNRLKLAE-EI-----GADL-TLNRRETSVEERRKAIMDITH-GRG  100 (182)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTBSEEEEEESCHHHHHHHH-HT-----TCSE-EEETTTSCHHHHHHHHHHHTT-TSC
T ss_pred             CEEEEECC-Cccchhheecccccccccccccccccccccccc-cc-----cceE-EEeccccchHHHHHHHHHhhC-CCC
Confidence            36899986 8999999999989998 8999999988765442 23     3332 222221233333333333322 236


Q ss_pred             eeEEEEcCCC
Q 025509           80 LNILINNAGI   89 (251)
Q Consensus        80 id~lv~~ag~   89 (251)
                      +|++|.++|.
T Consensus       101 ~Dvvid~vG~  110 (182)
T d1vj0a2         101 ADFILEATGD  110 (182)
T ss_dssp             EEEEEECSSC
T ss_pred             ceEEeecCCc
Confidence            9999999984

>d2cmda1 c.2.1.5 (A:1-145) Malate dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=97.63  E-value=0.0024  Score=45.77  Aligned_cols=116  Identities=17%  Similarity=0.200  Sum_probs=71.7

Q ss_pred             CEEEEECCCChhHHHHHHHHHHc-C--CEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcC
Q 025509            1 MDIVITGATSGIGTETARVLALR-G--VHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQH   77 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~-G--~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~   77 (251)
                      ++|.|+|++|.+|.++|-.|+.+ +  .++++.+..+ ..+.....+...........+ ..-.+.+.++          
T Consensus         1 MKV~IiGaaG~VG~~~a~~l~~~~~~~~el~L~D~~~-~~~g~a~Dl~h~~~~~~~~~~-~~~~~~~~~~----------   68 (145)
T d2cmda1           1 MKVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAP-VTPGVAVDLSHIPTAVKIKGF-SGEDATPALE----------   68 (145)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHSCTTCEEEEECSST-THHHHHHHHHTSCSSCEEEEE-CSSCCHHHHT----------
T ss_pred             CEEEEEcCCChHHHHHHHHHHhCCCCCcEEEEecccc-cchhHHHHHHCCccccCCcEE-EcCCCccccC----------
Confidence            57899999999999999988753 4  5899999864 455555555553212222222 2333333322          


Q ss_pred             CCeeEEEEcCCCCCCCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcC
Q 025509           78 HQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSS  141 (251)
Q Consensus        78 g~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS  141 (251)
                       .-|++|.+||....+.+ +   -.+.++.|.    .+++...+.+.+.    ++++.++++|.
T Consensus        69 -~aDvvvitaG~~~k~g~-~---R~dl~~~N~----~i~~~v~~~i~~~----~p~aivivvtN  119 (145)
T d2cmda1          69 -GADVVLISAGVRRKPGM-D---RSDLFNVNA----GIVKNLVQQVAKT----CPKACIGIITN  119 (145)
T ss_dssp             -TCSEEEECCSCCCCTTC-C---GGGGHHHHH----HHHHHHHHHHHHH----CTTSEEEECSS
T ss_pred             -CCCEEEECCCccCCCCc-c---hhhHHHHHH----HHHHHHHHHHHhh----CCCcEEEEccC
Confidence             57999999997543322 2   233356663    4456666666665    35677888876

>d1pzga1 c.2.1.5 (A:14-163) Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5811]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Toxoplasma gondii [TaxId: 5811]

Probab=97.62  E-value=0.00043  Score=50.44  Aligned_cols=120  Identities=17%  Similarity=0.097  Sum_probs=72.3

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCC-EEEEEecCchhHHHHHHHHHhhC--CCCceEEEEecCCCHHHHHHHHHHHHhcC
Q 025509            1 MDIVITGATSGIGTETARVLALRGV-HVVMGVRDIAAGKDVKETIVKEI--PSAKVDAMELDLSSLASVRNFASEYNIQH   77 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~-~Vi~~~r~~~~~~~~~~~~~~~~--~~~~v~~~~~D~~~~~~i~~~~~~~~~~~   77 (251)
                      ++|.|.|+ |.+|..+|..|+..+. ++++++.++++++.....+....  .+........  ++.++      .+    
T Consensus         8 ~KI~IIGa-G~VG~~lA~~l~~~~~~el~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~~~~~--~~~~~------~~----   74 (154)
T d1pzga1           8 KKVAMIGS-GMIGGTMGYLCALRELADVVLYDVVKGMPEGKALDLSHVTSVVDTNVSVRAE--YSYEA------AL----   74 (154)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHHHHHHHHTTCCCCEEEE--CSHHH------HH----
T ss_pred             CcEEEECC-CHHHHHHHHHHHhCCCceEEEEEeccccchhHHHHHhhhccccCCeeEEecc--Cchhh------hh----
Confidence            36888997 9999999999988885 89999999888777666665421  1222222211  12211      11    


Q ss_pred             CCeeEEEEcCCCCCCCCcCCc-hhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcC
Q 025509           78 HQLNILINNAGIMGTPFMLSK-DNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSS  141 (251)
Q Consensus        78 g~id~lv~~ag~~~~~~~~~~-~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS  141 (251)
                      ...|++|.++|....+.+.+. ..-.+.+..|.    .+++...+.+.+.    ++.+.++++|.
T Consensus        75 ~~adiVvitag~~~~~g~~~~~~tR~~l~~~n~----~iv~~i~~~i~~~----~p~aiviivsN  131 (154)
T d1pzga1          75 TGADCVIVTAGLTKVPGKPDSEWSRNDLLPFNS----KIIREIGQNIKKY----CPKTFIIVVTN  131 (154)
T ss_dssp             TTCSEEEECCSCSSCTTCCGGGCCGGGGHHHHH----HHHHHHHHHHHHH----CTTCEEEECCS
T ss_pred             cCCCeEEEecccccCCCCCCcccchhhhhhhhH----HHHHHHHHHHHhc----CCCcEEEEeCC
Confidence            168999999997643322111 11122344454    3455566666555    35677777776

>d1iz0a2 c.2.1.1 (A:99-269) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Thermus thermophilus [TaxId: 274]

Probab=97.59  E-value=0.00011  Score=54.65  Aligned_cols=72  Identities=13%  Similarity=0.189  Sum_probs=49.9

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      ++|||+||+|++|...++.+...|++|+.+++++++.+.+.+ +     +.+..   .|..+.  .    +++. ...++
T Consensus        29 ~~VlI~ga~G~vG~~aiqlak~~G~~vi~~~~~~~~~~~~~~-l-----Ga~~~---i~~~~~--~----~~~~-~~~g~   92 (171)
T d1iz0a2          29 EKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEKLALPLA-L-----GAEEA---ATYAEV--P----ERAK-AWGGL   92 (171)
T ss_dssp             CEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSGGGSHHHHH-T-----TCSEE---EEGGGH--H----HHHH-HTTSE
T ss_pred             CEEEEEeccccchhhhhhhhcccccccccccccccccccccc-c-----cccee---eehhhh--h----hhhh-ccccc
Confidence            479999999999999999888899999999998877654432 2     33322   233221  1    2222 23479


Q ss_pred             eEEEEcCC
Q 025509           81 NILINNAG   88 (251)
Q Consensus        81 d~lv~~ag   88 (251)
                      |+++.+.|
T Consensus        93 D~v~d~~G  100 (171)
T d1iz0a2          93 DLVLEVRG  100 (171)
T ss_dssp             EEEEECSC
T ss_pred             cccccccc
Confidence            99999876

>d1pl8a2 c.2.1.1 (A:146-316) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.58  E-value=0.0005  Score=50.77  Aligned_cols=78  Identities=19%  Similarity=0.212  Sum_probs=54.9

Q ss_pred             EEEEECCCChhHHHHHHHHHHcCC-EEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            2 DIVITGATSGIGTETARVLALRGV-HVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         2 ~vlItG~s~gIG~a~a~~l~~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      +|+|.|+ |++|...+..+...|+ +|+++++++.+++-+. ++     +... ++..+-.+..+..+.++...  ..++
T Consensus        29 ~VlI~G~-G~iG~~~~~~a~~~G~~~Vi~~d~~~~rl~~a~-~~-----Ga~~-~~~~~~~~~~~~~~~~~~~~--g~g~   98 (171)
T d1pl8a2          29 KVLVCGA-GPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAK-EI-----GADL-VLQISKESPQEIARKVEGQL--GCKP   98 (171)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHH-HT-----TCSE-EEECSSCCHHHHHHHHHHHH--TSCC
T ss_pred             EEEEECC-CccHHHHHHHHHHcCCceEEeccCCHHHHHHHH-Hh-----CCcc-cccccccccccccccccccC--CCCc
Confidence            6889976 9999999999989999 7999999988766543 23     3332 33334445555555555432  2379


Q ss_pred             eEEEEcCCC
Q 025509           81 NILINNAGI   89 (251)
Q Consensus        81 d~lv~~ag~   89 (251)
                      |++|.++|.
T Consensus        99 Dvvid~~G~  107 (171)
T d1pl8a2          99 EVTIECTGA  107 (171)
T ss_dssp             SEEEECSCC
T ss_pred             eEEEeccCC
Confidence            999999983

>d1vj1a2 c.2.1.1 (A:125-311) Putative zinc-binding alcohol dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative zinc-binding alcohol dehydrogenase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.57  E-value=7e-05  Score=56.59  Aligned_cols=77  Identities=16%  Similarity=0.195  Sum_probs=50.7

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCE-EEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCC
Q 025509            1 MDIVITGATSGIGTETARVLALRGVH-VVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQ   79 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~-Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~   79 (251)
                      ++|||+||+||+|...++.....|++ |+.+++++++..++..++     +..   ...|..+ +++.+.++++..  .+
T Consensus        32 etVLI~gaaGgVG~~aiQlak~~Ga~~vi~~~~~~e~~~~l~~~~-----gad---~vi~~~~-~~~~~~~~~~~~--~G  100 (187)
T d1vj1a2          32 QTMVVSGAAGACGSLAGQIGHLLGCSRVVGICGTQEKCLFLTSEL-----GFD---AAVNYKT-GNVAEQLREACP--GG  100 (187)
T ss_dssp             CEEEESSTTSTTGGGHHHHHHHTTCSEEEEEESSHHHHHHHHHHS-----CCS---EEEETTS-SCHHHHHHHHCT--TC
T ss_pred             CEEEEECCCchhhHHHHHHHHHcCCcceecccchHHHHhhhhhcc-----cce---EEeeccc-hhHHHHHHHHhc--cC
Confidence            36999999999999999988888986 455566666655554433     332   2224543 233444444432  36


Q ss_pred             eeEEEEcCC
Q 025509           80 LNILINNAG   88 (251)
Q Consensus        80 id~lv~~ag   88 (251)
                      +|+++.+.|
T Consensus       101 vDvv~D~vG  109 (187)
T d1vj1a2         101 VDVYFDNVG  109 (187)
T ss_dssp             EEEEEESSC
T ss_pred             ceEEEecCC
Confidence            999999997

>d1guza1 c.2.1.5 (A:1-142) Malate dehydrogenase {Chlorobium vibrioforme [TaxId: 1098]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Chlorobium vibrioforme [TaxId: 1098]

Probab=97.57  E-value=0.00079  Score=48.24  Aligned_cols=115  Identities=22%  Similarity=0.173  Sum_probs=70.5

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCC--EEEEEecCchhHHHHHHHHHhhC--CCCceEEEEecCCCHHHHHHHHHHHHhc
Q 025509            1 MDIVITGATSGIGTETARVLALRGV--HVVMGVRDIAAGKDVKETIVKEI--PSAKVDAMELDLSSLASVRNFASEYNIQ   76 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~--~Vi~~~r~~~~~~~~~~~~~~~~--~~~~v~~~~~D~~~~~~i~~~~~~~~~~   76 (251)
                      ++|.|+|+ |.+|.+++..|+..|.  ++++.++++++++.....+....  ......+...  .+.+.           
T Consensus         1 mKI~IIGa-G~VG~~la~~l~~~~l~~el~L~Di~~~~~~~~~~d~~~~~~~~~~~~~i~~~--~~~~~-----------   66 (142)
T d1guza1           1 MKITVIGA-GNVGATTAFRLAEKQLARELVLLDVVEGIPQGKALDMYESGPVGLFDTKVTGS--NDYAD-----------   66 (142)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCEEEEE--SCGGG-----------
T ss_pred             CEEEEECc-CHHHHHHHHHHHhCCCCceEEEeccccccchhhhhhhhcccchhcccceEEec--CCHHH-----------
Confidence            46888896 9999999999999873  89999999887665554443321  1223333322  22222           


Q ss_pred             CCCeeEEEEcCCCCCCCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcC
Q 025509           77 HHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSS  141 (251)
Q Consensus        77 ~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS  141 (251)
                      ....|++|.+||....+.+ +   -.+.++.|.    .+++...+.+.+.    ++.+.++++|-
T Consensus        67 ~~dadvvvitag~~~~~g~-~---r~~l~~~N~----~i~~~i~~~i~~~----~p~aivivvtN  119 (142)
T d1guza1          67 TANSDIVIITAGLPRKPGM-T---REDLLMKNA----GIVKEVTDNIMKH----SKNPIIIVVSN  119 (142)
T ss_dssp             GTTCSEEEECCSCCCCTTC-C---HHHHHHHHH----HHHHHHHHHHHHH----CSSCEEEECCS
T ss_pred             hcCCeEEEEEEecCCCCCC-c---hHHHHHHHH----HHHHHHHHHhhcc----CCCeEEEEecC
Confidence            2378999999997543221 1   123344443    3455566666554    34677777765

>d2f1ka2 c.2.1.6 (A:1-165) Prephenate dehydrogenase TyrA {Synechocystis sp. pcc 6803 [TaxId: 1148]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Synechocystis sp. pcc 6803 [TaxId: 1148]

Probab=97.55  E-value=0.00031  Score=51.60  Aligned_cols=84  Identities=18%  Similarity=0.130  Sum_probs=56.9

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHH--------HhhCCCCceEEEEecCCCHHHHHHHHHH
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETI--------VKEIPSAKVDAMELDLSSLASVRNFASE   72 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~--------~~~~~~~~v~~~~~D~~~~~~i~~~~~~   72 (251)
                      |+|.|.|. |-+|.++|+.|.++|++|++.+|+++..++..+.-        .+.....++.++.+   ..+++++++++
T Consensus         1 MkI~iIG~-G~mG~~lA~~l~~~g~~V~~~d~~~~~~~~a~~~~~~~~~~~~~~~~~~~DiIilav---p~~~~~~vl~~   76 (165)
T d2f1ka2           1 MKIGVVGL-GLIGASLAGDLRRRGHYLIGVSRQQSTCEKAVERQLVDEAGQDLSLLQTAKIIFLCT---PIQLILPTLEK   76 (165)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTSCSEEESCGGGGTTCSEEEECS---CHHHHHHHHHH
T ss_pred             CEEEEEee-cHHHHHHHHHHHHCCCEEEEEECCchHHHHHHHhhccceeeeecccccccccccccC---cHhhhhhhhhh
Confidence            57888865 99999999999999999999999987766654321        11222344444433   35678888888


Q ss_pred             HHhcCCCeeEEEEcCC
Q 025509           73 YNIQHHQLNILINNAG   88 (251)
Q Consensus        73 ~~~~~g~id~lv~~ag   88 (251)
                      +.....+=.+++..++
T Consensus        77 l~~~l~~~~iv~~~~s   92 (165)
T d2f1ka2          77 LIPHLSPTAIVTDVAS   92 (165)
T ss_dssp             HGGGSCTTCEEEECCS
T ss_pred             hhhhcccccceeeccc
Confidence            8765544445555543

>d7mdha1 c.2.1.5 (A:23-197) Malate dehydrogenase {Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]

Probab=97.49  E-value=0.0016  Score=48.31  Aligned_cols=117  Identities=10%  Similarity=-0.047  Sum_probs=67.6

Q ss_pred             EEEEECCCChhHHHHHHHHHHcC---C----EEEEEecCc--hhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHH
Q 025509            2 DIVITGATSGIGTETARVLALRG---V----HVVMGVRDI--AAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASE   72 (251)
Q Consensus         2 ~vlItG~s~gIG~a~a~~l~~~G---~----~Vi~~~r~~--~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~   72 (251)
                      +|.||||+|.||.+++-.|++.+   .    .+.+.+...  +.++....++.+......-.+...  ++..        
T Consensus        26 kV~I~GA~G~Ig~~l~~~La~g~v~g~~~~i~L~L~di~~~~~~l~g~~mdl~d~a~~~~~~~~~~--~~~~--------   95 (175)
T d7mdha1          26 NIAVSGAAGMISNHLLFKLASGEVFGQDQPIALKLLGSERSFQALEGVAMELEDSLYPLLREVSIG--IDPY--------   95 (175)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCTTEEEEEEE--SCHH--------
T ss_pred             EEEEECCCcHHHHHHHHHHHcCcccCCCceEEEEEecCccccchhcchhhhhcccccccccCcccc--ccch--------
Confidence            48999999999999999999753   2    344555433  344555555554322221122222  1211        


Q ss_pred             HHhcCCCeeEEEEcCCCCCCCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcC
Q 025509           73 YNIQHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSS  141 (251)
Q Consensus        73 ~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS  141 (251)
                        +.+...|++|..+|....+.    +...+.++.|    ..+++...+.+.+.++   +..+|+.++.
T Consensus        96 --~~~~~aDvVvi~ag~~rkpg----~tR~Dll~~N----~~I~k~~~~~i~~~a~---~~~~vlvv~N  151 (175)
T d7mdha1          96 --EVFEDVDWALLIGAKPRGPG----MERAALLDIN----GQIFADQGKALNAVAS---KNVKVLVVGN  151 (175)
T ss_dssp             --HHTTTCSEEEECCCCCCCTT----CCHHHHHHHH----HHHHHHHHHHHHHHSC---TTCEEEECSS
T ss_pred             --hhccCCceEEEeeccCCCCC----CcHHHHHHHH----HHHHHHHHHHHHhhCC---CCcEEEEecC
Confidence              12237999999999754322    2344456666    3455666677766521   2456666664

>d1jvba2 c.2.1.1 (A:144-313) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

Probab=97.49  E-value=0.00033  Score=51.65  Aligned_cols=78  Identities=13%  Similarity=0.145  Sum_probs=53.5

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCC-EEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCC
Q 025509            1 MDIVITGATSGIGTETARVLALRGV-HVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQ   79 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~   79 (251)
                      .+|+|+|++|++|..++..+...|+ +|+++++++++.+.+.+ +     +... +  .|.++.+..++..+..  ..+.
T Consensus        29 ~~vlV~G~~G~vG~~~~~~~~~~g~~~V~~~~~~~~~~~~~~~-~-----Ga~~-~--i~~~~~~~~~~~~~~~--~~~~   97 (170)
T d1jvba2          29 KTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAKR-A-----GADY-V--INASMQDPLAEIRRIT--ESKG   97 (170)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHHHHH-H-----TCSE-E--EETTTSCHHHHHHHHT--TTSC
T ss_pred             CEEEEEeccccceeeeeecccccccccccccccchhhHHHHHH-c-----CCce-e--eccCCcCHHHHHHHHh--hccc
Confidence            3699999999999999999998886 88999998776554432 3     3332 2  2444444444443332  2246


Q ss_pred             eeEEEEcCCC
Q 025509           80 LNILINNAGI   89 (251)
Q Consensus        80 id~lv~~ag~   89 (251)
                      +|+++.++|.
T Consensus        98 ~d~vid~~g~  107 (170)
T d1jvba2          98 VDAVIDLNNS  107 (170)
T ss_dssp             EEEEEESCCC
T ss_pred             chhhhccccc
Confidence            9999999983

>d1nyta1 c.2.1.7 (A:102-271) Shikimate 5-dehydrogenase AroE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Escherichia coli [TaxId: 562]

Probab=97.47  E-value=0.00018  Score=53.32  Aligned_cols=72  Identities=17%  Similarity=0.324  Sum_probs=52.8

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      |+|||.|+ ||.+++++..|.+.|.+|.++.|+.++++++.+.+.+..   .+..+  +..+.            .....
T Consensus        19 k~vlIlGa-GGaarai~~al~~~g~~i~I~nRt~~ka~~l~~~~~~~~---~~~~~--~~~~~------------~~~~~   80 (170)
T d1nyta1          19 LRILLIGA-GGASRGVLLPLLSLDCAVTITNRTVSRAEELAKLFAHTG---SIQAL--SMDEL------------EGHEF   80 (170)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHTGGGS---SEEEC--CSGGG------------TTCCC
T ss_pred             CEEEEECC-cHHHHHHHHHhcccceEEEeccchHHHHHHHHHHHhhcc---ccccc--ccccc------------ccccc
Confidence            57999986 889999999999999999999999999888877664432   22222  22211            12368


Q ss_pred             eEEEEcCCCC
Q 025509           81 NILINNAGIM   90 (251)
Q Consensus        81 d~lv~~ag~~   90 (251)
                      |++||+....
T Consensus        81 dliIN~Tp~G   90 (170)
T d1nyta1          81 DLIINATSSG   90 (170)
T ss_dssp             SEEEECCSCG
T ss_pred             ceeecccccC
Confidence            9999998653

>d2ldxa1 c.2.1.5 (A:1-159) Lactate dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.46  E-value=0.0012  Score=48.27  Aligned_cols=113  Identities=15%  Similarity=0.154  Sum_probs=72.0

Q ss_pred             EEEEECCCChhHHHHHHHHHHcCC--EEEEEecCchhHHHHHHHHHhhCC--CCceEEEEecCCCHHHHHHHHHHHHhcC
Q 025509            2 DIVITGATSGIGTETARVLALRGV--HVVMGVRDIAAGKDVKETIVKEIP--SAKVDAMELDLSSLASVRNFASEYNIQH   77 (251)
Q Consensus         2 ~vlItG~s~gIG~a~a~~l~~~G~--~Vi~~~r~~~~~~~~~~~~~~~~~--~~~v~~~~~D~~~~~~i~~~~~~~~~~~   77 (251)
                      .|.|+|+ |.+|.++|..|+.+|.  ++++++++++.+......+.....  +........|.   +           ..
T Consensus        21 KI~IIGa-G~VG~~~A~~l~~~~l~~elvL~D~~~~~a~g~alDl~~~~~~~~~~~~~~~~d~---~-----------~~   85 (159)
T d2ldxa1          21 KITVVGV-GDVGMACAISILLKGLADELALVDADTDKLRGEALDLQHGSLFLSTPKIVFGKDY---N-----------VS   85 (159)
T ss_dssp             EEEEECC-SHHHHHHHHHHHTTTSCSEEEEECSCHHHHHHHHHHHHHTTTTCSCCEEEEESSG---G-----------GG
T ss_pred             eEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCchhhhccHHHHhCcchhcCCCeEEeccch---h-----------hh
Confidence            4788885 9999999999999875  799999998887777666765322  22222222232   1           12


Q ss_pred             CCeeEEEEcCCCCCCCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcC
Q 025509           78 HQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSS  141 (251)
Q Consensus        78 g~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS  141 (251)
                      ..-|++|..||....+.+...+-    ++.|.    .+++...+.+.+.    ++.+.++++|.
T Consensus        86 ~~adivvitag~~~~~~~~R~dl----l~~N~----~i~~~i~~~i~~~----~p~~ivivvtN  137 (159)
T d2ldxa1          86 ANSKLVIITAGARMVSGQTRLDL----LQRNV----AIMKAIVPGVIQN----SPDCKIIVVTN  137 (159)
T ss_dssp             TTEEEEEECCSCCCCTTTCSSCT----THHHH----HHHHHHTTTHHHH----STTCEEEECSS
T ss_pred             ccccEEEEecccccCCCCCHHHH----HHHHH----HHHHHHHHHHhcc----CCCeEEEEeCC
Confidence            37899999999754432222222    33343    3345555666554    35678888886

>d1o6za1 c.2.1.5 (A:22-162) Malate dehydrogenase {Archaeon Haloarcula marismortui [TaxId: 2238]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Archaeon Haloarcula marismortui [TaxId: 2238]

Probab=97.46  E-value=0.002  Score=46.09  Aligned_cols=114  Identities=13%  Similarity=0.130  Sum_probs=72.2

Q ss_pred             EEEEECCCChhHHHHHHHHHHcCC--EEEEEecC--chhHHHHHHHHHhhCC-CCceEEEEecCCCHHHHHHHHHHHHhc
Q 025509            2 DIVITGATSGIGTETARVLALRGV--HVVMGVRD--IAAGKDVKETIVKEIP-SAKVDAMELDLSSLASVRNFASEYNIQ   76 (251)
Q Consensus         2 ~vlItG~s~gIG~a~a~~l~~~G~--~Vi~~~r~--~~~~~~~~~~~~~~~~-~~~v~~~~~D~~~~~~i~~~~~~~~~~   76 (251)
                      +|.|+|++|.+|.++|-.++.+|.  ++++.+.+  ++.++.....+....+ .....+...|.   ++           
T Consensus         2 KV~IiGaaG~VG~~~A~~l~~~~l~~el~L~Di~~~~~~~~g~a~Dl~~~~~~~~~~~i~~~~~---~~-----------   67 (142)
T d1o6za1           2 KVSVVGAAGTVGAAAGYNIALRDIADEVVFVDIPDKEDDTVGQAADTNHGIAYDSNTRVRQGGY---ED-----------   67 (142)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCCSEEEEECCGGGHHHHHHHHHHHHHHHTTTCCCEEEECCG---GG-----------
T ss_pred             eEEEECCCCcHHHHHHHHHHhCCCCCEEEEEecCCcccccceeecchhhcccccCCceEeeCCH---HH-----------
Confidence            588999999999999999999885  79999864  3334434444443211 23344433332   21           


Q ss_pred             CCCeeEEEEcCCCCCCCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcC
Q 025509           77 HHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSS  141 (251)
Q Consensus        77 ~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS  141 (251)
                      ...-|++|..||....+.    ++-.+.++.|.    .+++...+.+.+.    ++++.++++|.
T Consensus        68 ~~~aDiVvitaG~~~~~g----~~R~dl~~~N~----~I~~~i~~~i~~~----~p~~i~ivvtN  120 (142)
T d1o6za1          68 TAGSDVVVITAGIPRQPG----QTRIDLAGDNA----PIMEDIQSSLDEH----NDDYISLTTSN  120 (142)
T ss_dssp             GTTCSEEEECCCCCCCTT----CCHHHHHHHHH----HHHHHHHHHHHTT----CSCCEEEECCS
T ss_pred             hhhcCEEEEecccccccC----CchhhHHHHHH----HHHHHHHHHHHhc----CCCceEEEecC
Confidence            137899999999754322    22344455563    4566677777665    35677777765

>d1y7ta1 c.2.1.5 (A:0-153) Malate dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=97.44  E-value=0.0007  Score=49.23  Aligned_cols=117  Identities=10%  Similarity=0.047  Sum_probs=66.8

Q ss_pred             EEEEECCCChhHHHHHHHHHHcCC---------EEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHH
Q 025509            2 DIVITGATSGIGTETARVLALRGV---------HVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASE   72 (251)
Q Consensus         2 ~vlItG~s~gIG~a~a~~l~~~G~---------~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~   72 (251)
                      +|.|+||+|.+|.+++-.|++.+.         +++...++.+.++.....+.... ......+...-.+.+.       
T Consensus         6 KV~IiGA~G~VG~~~a~~l~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~-------   77 (154)
T d1y7ta1           6 RVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIPQAMKALEGVVMELEDCA-FPLLAGLEATDDPKVA-------   77 (154)
T ss_dssp             EEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTT-CTTEEEEEEESCHHHH-------
T ss_pred             EEEEECCCCHHHHHHHHHHHhccccccccchhHhHhccccchhhHcCchhhhhccc-cccccccccCCchhhh-------
Confidence            689999999999999999998652         22333445555555555444432 1223333333222221       


Q ss_pred             HHhcCCCeeEEEEcCCCCCCCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcC
Q 025509           73 YNIQHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSS  141 (251)
Q Consensus        73 ~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS  141 (251)
                          ....|++|..+|....+. ++   -++.+..|.    .+++.+.+.+.+.+.   ..+.|+.+|.
T Consensus        78 ----~~~advViitaG~~~~pg-~~---r~dl~~~N~----~i~~~~~~~i~k~a~---~~~~vivvsN  131 (154)
T d1y7ta1          78 ----FKDADYALLVGAAPRKAG-ME---RRDLLQVNG----KIFTEQGRALAEVAK---KDVKVLVVGN  131 (154)
T ss_dssp             ----TTTCSEEEECCCCCCCTT-CC---HHHHHHHHH----HHHHHHHHHHHHHSC---TTCEEEECSS
T ss_pred             ----cccccEEEeecCcCCCCC-Cc---HHHHHHHHH----HHHHHHHHHHHHhCC---CCcEEEEecC
Confidence                237899999999754321 12   233455554    455666666666421   2456666664

>d1llda1 c.2.1.5 (A:7-149) Lactate dehydrogenase {Bifidobacterium longum, strain am101-2 [TaxId: 216816]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Bifidobacterium longum, strain am101-2 [TaxId: 216816]

Probab=97.44  E-value=0.0015  Score=46.89  Aligned_cols=114  Identities=13%  Similarity=0.123  Sum_probs=71.9

Q ss_pred             EEEEECCCChhHHHHHHHHHHcCC--EEEEEecCchhHHHHHHHHHhhCC-CCceEEEEecCCCHHHHHHHHHHHHhcCC
Q 025509            2 DIVITGATSGIGTETARVLALRGV--HVVMGVRDIAAGKDVKETIVKEIP-SAKVDAMELDLSSLASVRNFASEYNIQHH   78 (251)
Q Consensus         2 ~vlItG~s~gIG~a~a~~l~~~G~--~Vi~~~r~~~~~~~~~~~~~~~~~-~~~v~~~~~D~~~~~~i~~~~~~~~~~~g   78 (251)
                      +|.|+|+ |.+|.++|-.|+.+|.  +++++++++++++.....+....+ .....+...+  +.+++           .
T Consensus         3 Ki~IIGa-G~VG~~~a~~l~~~~l~~ElvL~D~~~~~~~g~a~Dl~~a~~~~~~~~i~~~~--~~~~~-----------~   68 (143)
T d1llda1           3 KLAVIGA-GAVGSTLAFAAAQRGIAREIVLEDIAKERVEAEVLDMQHGSSFYPTVSIDGSD--DPEIC-----------R   68 (143)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHHHTGGGSTTCEEEEES--CGGGG-----------T
T ss_pred             EEEEECC-CHHHHHHHHHHHhcCCCcEEEEEEeccccchhHHHHHHhccccCCCceeecCC--CHHHh-----------h
Confidence            5778896 9999999999999885  799999998887666666655311 1122222221  22221           2


Q ss_pred             CeeEEEEcCCCCCCCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcC
Q 025509           79 QLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSS  141 (251)
Q Consensus        79 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS  141 (251)
                      .-|++|..||....+. .+   -.+.+..|.    .+++...+.+.+.    ++.+.++++|.
T Consensus        69 daDvVVitaG~~~~~g-~~---R~dl~~~N~----~i~~~i~~~i~~~----~p~ai~ivvtN  119 (143)
T d1llda1          69 DADMVVITAGPRQKPG-QS---RLELVGATV----NILKAIMPNLVKV----APNAIYMLITN  119 (143)
T ss_dssp             TCSEEEECCCCCCCTT-CC---HHHHHHHHH----HHHHHHHHHHHHH----CTTSEEEECCS
T ss_pred             CCcEEEEecccccCCC-Cc---hhhhhhhhH----HHHHHHHHHHHhh----CCCeEEEEeCC
Confidence            6799999999754322 12   233455554    4556666666665    34577777765

>d1ojua1 c.2.1.5 (A:22-163) Malate dehydrogenase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=97.43  E-value=0.0007  Score=48.60  Aligned_cols=114  Identities=14%  Similarity=0.096  Sum_probs=71.9

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCC--EEEEEecCchhHHHHHHHHHhhC--CCCceEEEE-ecCCCHHHHHHHHHHHHh
Q 025509            1 MDIVITGATSGIGTETARVLALRGV--HVVMGVRDIAAGKDVKETIVKEI--PSAKVDAME-LDLSSLASVRNFASEYNI   75 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~--~Vi~~~r~~~~~~~~~~~~~~~~--~~~~v~~~~-~D~~~~~~i~~~~~~~~~   75 (251)
                      |.+.|+|+ |.+|.++|-.|+.+|.  ++++++++++.++.....+....  ......+.. .|.   ++          
T Consensus         1 MKI~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~~~~g~alDl~~~~~~~~~~~~i~~~~d~---~~----------   66 (142)
T d1ojua1           1 MKLGFVGA-GRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGGADY---SL----------   66 (142)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHHTTTCCCEEEEESCG---GG----------
T ss_pred             CEEEEECc-CHHHHHHHHHHHhcCcCceEEEEecccchhhHHHHHHhhhccccCCCCccccCCCH---HH----------
Confidence            56888896 9999999999998874  79999999888766655565431  122223332 232   21          


Q ss_pred             cCCCeeEEEEcCCCCCCCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcC
Q 025509           76 QHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSS  141 (251)
Q Consensus        76 ~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS  141 (251)
                       ...-|++|..||....+..    .-.+.+..|    ..+++...+.+.+.    ++.+.++++|.
T Consensus        67 -~~~adiVvitag~~~~~g~----~r~~l~~~n----~~i~~~i~~~i~~~----~p~aivivvtN  119 (142)
T d1ojua1          67 -LKGSEIIVVTAGLARKPGM----TRLDLAHKN----AGIIKDIAKKIVEN----APESKILVVTN  119 (142)
T ss_dssp             -GTTCSEEEECCCCCCCSSC----CHHHHHHHH----HHHHHHHHHHHHTT----STTCEEEECSS
T ss_pred             -hccccEEEEeccccCCCCC----chHHHHHHh----hHHHHHHHHHHHhh----CCCcEEEEecC
Confidence             1268999999997543221    123334444    34556666666664    34677777775

>d1y6ja1 c.2.1.5 (A:7-148) Lactate dehydrogenase {Clostridium thermocellum [TaxId: 1515]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Clostridium thermocellum [TaxId: 1515]

Probab=97.43  E-value=0.00078  Score=48.32  Aligned_cols=113  Identities=18%  Similarity=0.174  Sum_probs=67.2

Q ss_pred             EEEEECCCChhHHHHHHHHHHcCC--EEEEEecCchhHHHHHHHHHhhCCC-CceEEEEecCCCHHHHHHHHHHHHhcCC
Q 025509            2 DIVITGATSGIGTETARVLALRGV--HVVMGVRDIAAGKDVKETIVKEIPS-AKVDAMELDLSSLASVRNFASEYNIQHH   78 (251)
Q Consensus         2 ~vlItG~s~gIG~a~a~~l~~~G~--~Vi~~~r~~~~~~~~~~~~~~~~~~-~~v~~~~~D~~~~~~i~~~~~~~~~~~g   78 (251)
                      .|.|+|+ |.+|.++|-.++.+|.  +++++++++++++.....+....+- ........   +++           ...
T Consensus         3 KI~IIGa-G~VG~~~a~~l~~~~l~~el~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~~~~---~~~-----------~~~   67 (142)
T d1y6ja1           3 KVAIIGA-GFVGASAAFTMALRQTANELVLIDVFKEKAIGEAMDINHGLPFMGQMSLYAG---DYS-----------DVK   67 (142)
T ss_dssp             CEEEECC-SHHHHHHHHHHHHTTCSSEEEEECCC---CCHHHHHHTTSCCCTTCEEEC-----CGG-----------GGT
T ss_pred             eEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeccCCccceeeeeeccCcccCCCeeEeeC---cHH-----------HhC
Confidence            4778886 9999999999999875  7999999987766655566543221 12222211   211           123


Q ss_pred             CeeEEEEcCCCCCCCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcC
Q 025509           79 QLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSS  141 (251)
Q Consensus        79 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS  141 (251)
                      .-|++|..||....+.    +.-.+.++.|.    .+++.+.+.+.+.    ++.+.++++|.
T Consensus        68 ~adivvitag~~~~~~----~~r~~l~~~N~----~i~~~i~~~i~~~----~p~ai~ivvtN  118 (142)
T d1y6ja1          68 DCDVIVVTAGANRKPG----ETRLDLAKKNV----MIAKEVTQNIMKY----YNHGVILVVSN  118 (142)
T ss_dssp             TCSEEEECCCC----------CHHHHHHHHH----HHHHHHHHHHHHH----CCSCEEEECSS
T ss_pred             CCceEEEecccccCcC----cchhHHhhHHH----HHHHHHHHHhhcc----CCCceEEEecC
Confidence            6899999999654321    12233455554    5566666777665    35677777775

>d2hmva1 c.2.1.9 (A:7-140) Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn bsu222
species: Bacillus subtilis [TaxId: 1423]

Probab=97.42  E-value=0.00012  Score=51.92  Aligned_cols=73  Identities=12%  Similarity=0.108  Sum_probs=55.4

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      |.++|.|+ |-+|.++|+.|.+.|+.|++++.+++..+++.        .....++..|.++++.++++-      ....
T Consensus         1 k~~iIiG~-G~~G~~la~~L~~~g~~vvvid~d~~~~~~~~--------~~~~~~~~gd~~~~~~l~~a~------i~~a   65 (134)
T d2hmva1           1 KQFAVIGL-GRFGGSIVKELHRMGHEVLAVDINEEKVNAYA--------SYATHAVIANATEENELLSLG------IRNF   65 (134)
T ss_dssp             CCEEEECC-SHHHHHHHHHHHHTTCCCEEEESCHHHHHHTT--------TTCSEEEECCTTCTTHHHHHT------GGGC
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCCeEEEecCcHHHHHHHH--------HhCCcceeeecccchhhhccC------Cccc
Confidence            67888876 78999999999999999999999988766653        223566778999987776531      1256


Q ss_pred             eEEEEcCC
Q 025509           81 NILINNAG   88 (251)
Q Consensus        81 d~lv~~ag   88 (251)
                      |.+|...+
T Consensus        66 ~~vi~~~~   73 (134)
T d2hmva1          66 EYVIVAIG   73 (134)
T ss_dssp             SEEEECCC
T ss_pred             cEEEEEcC
Confidence            77777664

>d1i0za1 c.2.1.5 (A:1-160) Lactate dehydrogenase {Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]

Probab=97.40  E-value=0.0025  Score=46.53  Aligned_cols=113  Identities=14%  Similarity=0.074  Sum_probs=73.5

Q ss_pred             EEEEECCCChhHHHHHHHHHHcCC--EEEEEecCchhHHHHHHHHHhhCC--CCceEEEEecCCCHHHHHHHHHHHHhcC
Q 025509            2 DIVITGATSGIGTETARVLALRGV--HVVMGVRDIAAGKDVKETIVKEIP--SAKVDAMELDLSSLASVRNFASEYNIQH   77 (251)
Q Consensus         2 ~vlItG~s~gIG~a~a~~l~~~G~--~Vi~~~r~~~~~~~~~~~~~~~~~--~~~v~~~~~D~~~~~~i~~~~~~~~~~~   77 (251)
                      .|.|.|+ |.+|.++|-.|+..|.  ++++++++++.++.....+.....  +.....-..|.   ++           .
T Consensus        22 KV~IIGa-G~VG~~~A~~l~~~~l~~ElvLiD~~~~~a~g~alDl~h~~~~~~~~~~~~~~d~---~~-----------~   86 (160)
T d1i0za1          22 KITVVGV-GQVGMACAISILGKSLADELALVDVLEDKLKGEMMDLQHGSLFLQTPKIVADKDY---SV-----------T   86 (160)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHHHHTGGGCCCSEEEECSSG---GG-----------G
T ss_pred             eEEEECC-CHHHHHHHHHHHhcCCCcEEEEEEeccchhHHHHHHHhccccccCCCeEEeccch---hh-----------c
Confidence            5788896 9999999999999986  799999998887766666654211  22222222222   22           2


Q ss_pred             CCeeEEEEcCCCCCCCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcC
Q 025509           78 HQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSS  141 (251)
Q Consensus        78 g~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS  141 (251)
                      ..-|++|..||....+. .+.   .+.++.|.    .+++...+.+.+.    ++.+-++++|.
T Consensus        87 ~~adiVVitAg~~~~~g-~tR---~~l~~~N~----~i~~~i~~~i~~~----~p~aiiivvtN  138 (160)
T d1i0za1          87 ANSKIVVVTAGVRQQEG-ESR---LNLVQRNV----NVFKFIIPQIVKY----SPDCIIIVVSN  138 (160)
T ss_dssp             TTCSEEEECCSCCCCTT-CCG---GGGHHHHH----HHHHHHHHHHHHH----CTTCEEEECSS
T ss_pred             ccccEEEEecCCccccC-cch---HHHHHHHH----HHHHHHHHHHHhc----CCCcEEEEeCC
Confidence            37899999999754332 222   23344453    4566667777665    35677888876

>d1p77a1 c.2.1.7 (A:102-272) Shikimate 5-dehydrogenase AroE {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Haemophilus influenzae [TaxId: 727]

Probab=97.35  E-value=0.00042  Score=51.39  Aligned_cols=72  Identities=18%  Similarity=0.268  Sum_probs=53.4

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      |+|+|.|+ ||.+++++..|.+.+.+|.++.|+.++++...+.+...   ..+.....|-.              .....
T Consensus        19 k~vlIlGa-GGaarai~~aL~~~~~~i~I~nR~~~~a~~l~~~~~~~---~~~~~~~~~~~--------------~~~~~   80 (171)
T d1p77a1          19 QHVLILGA-GGATKGVLLPLLQAQQNIVLANRTFSKTKELAERFQPY---GNIQAVSMDSI--------------PLQTY   80 (171)
T ss_dssp             CEEEEECC-SHHHHTTHHHHHHTTCEEEEEESSHHHHHHHHHHHGGG---SCEEEEEGGGC--------------CCSCC
T ss_pred             CEEEEECC-cHHHHHHHHHHcccCceeeeccchHHHHHHHHHHHhhc---cccchhhhccc--------------ccccc
Confidence            46888865 78899999999987789999999999999888877543   23444443311              12478


Q ss_pred             eEEEEcCCCC
Q 025509           81 NILINNAGIM   90 (251)
Q Consensus        81 d~lv~~ag~~   90 (251)
                      |++||+....
T Consensus        81 diiIN~tp~g   90 (171)
T d1p77a1          81 DLVINATSAG   90 (171)
T ss_dssp             SEEEECCCC-
T ss_pred             ceeeeccccc
Confidence            9999998754

>d1uxja1 c.2.1.5 (A:2-143) Malate dehydrogenase {Chloroflexus aurantiacus [TaxId: 1108]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Chloroflexus aurantiacus [TaxId: 1108]

Probab=97.34  E-value=0.00037  Score=50.10  Aligned_cols=115  Identities=19%  Similarity=0.159  Sum_probs=69.3

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCC-EEEEEecCchhHHHHHHHHHhhC--CCCceEEEEecCCCHHHHHHHHHHHHhcC
Q 025509            1 MDIVITGATSGIGTETARVLALRGV-HVVMGVRDIAAGKDVKETIVKEI--PSAKVDAMELDLSSLASVRNFASEYNIQH   77 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~-~Vi~~~r~~~~~~~~~~~~~~~~--~~~~v~~~~~D~~~~~~i~~~~~~~~~~~   77 (251)
                      |+|.|+|+ |.+|.++|-.|+.++. ++++.+.+++..+.....+....  ......+...  .++++           .
T Consensus         2 ~KI~IIGa-G~VG~~~A~~l~~~~l~dl~l~D~~~~~~~~~~~Dl~~~~~~~~~~~~i~~~--~d~~~-----------~   67 (142)
T d1uxja1           2 KKISIIGA-GFVGSTTAHWLAAKELGDIVLLDIVEGVPQGKALDLYEASPIEGFDVRVTGT--NNYAD-----------T   67 (142)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEE--SCGGG-----------G
T ss_pred             CeEEEECC-CHHHHHHHHHHHhCCcceEEEEeeccccchhHHHHhhccccccCCCCEEEec--CcHHH-----------h
Confidence            46788886 9999999999998885 89999998887666555553221  0122222221  11111           1


Q ss_pred             CCeeEEEEcCCCCCCCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcC
Q 025509           78 HQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSS  141 (251)
Q Consensus        78 g~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS  141 (251)
                      ..-|++|.+||....+.+ +   -.+.++.|.    .+++...+.+.+.    ++.+.++++|-
T Consensus        68 ~~advvvitag~~~~~~~-~---r~dl~~~N~----~i~~~i~~~i~k~----~p~aivivvtN  119 (142)
T d1uxja1          68 ANSDVIVVTSGAPRKPGM-S---REDLIKVNA----DITRACISQAAPL----SPNAVIIMVNN  119 (142)
T ss_dssp             TTCSEEEECCSCC-------------CHHHHH----HHHHHHHHHHGGG----CTTCEEEECSS
T ss_pred             cCCCEEEEeeeccCCcCc-c---hhHHHhHHH----HHHHHHHHHHhcc----CCCceEEEeCC
Confidence            268999999997543222 1   123344453    4667777777665    35677777665

>d1t2da1 c.2.1.5 (A:1-150) Lactate dehydrogenase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=97.29  E-value=0.0053  Score=44.19  Aligned_cols=118  Identities=16%  Similarity=0.119  Sum_probs=74.2

Q ss_pred             EEEEECCCChhHHHHHHHHHHcCC-EEEEEecCchhHHHHHHHHHhh--CCCCceEEEEecCCCHHHHHHHHHHHHhcCC
Q 025509            2 DIVITGATSGIGTETARVLALRGV-HVVMGVRDIAAGKDVKETIVKE--IPSAKVDAMELDLSSLASVRNFASEYNIQHH   78 (251)
Q Consensus         2 ~vlItG~s~gIG~a~a~~l~~~G~-~Vi~~~r~~~~~~~~~~~~~~~--~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g   78 (251)
                      .|.|.|+ |.+|.++|..|+..+. ++++.+++++.+......+...  .......+...+-  ++           ...
T Consensus         5 KI~IIGa-G~VG~~~a~~l~~~~l~el~L~Di~~~~~~g~a~Dl~~~~~~~~~~~~v~~~~~--~~-----------~~~   70 (150)
T d1t2da1           5 KIVLVGS-GMIGGVMATLIVQKNLGDVVLFDIVKNMPHGKALDTSHTNVMAYSNCKVSGSNT--YD-----------DLA   70 (150)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTHHHHHTCCCCEEEECC--GG-----------GGT
T ss_pred             eEEEECC-CHHHHHHHHHHHhCCCCeEEEEeccCCcceeeecchhhhccccCCCcEEEeccc--cc-----------ccC
Confidence            5788895 9999999988888875 8999999988777666665442  1133344443322  21           123


Q ss_pred             CeeEEEEcCCCCCCCCcCC-chhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcC
Q 025509           79 QLNILINNAGIMGTPFMLS-KDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSS  141 (251)
Q Consensus        79 ~id~lv~~ag~~~~~~~~~-~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS  141 (251)
                      .-|++|.++|....+.+.+ ..+=.+.++.|.    .+++.+.+.+.+.    ++++.++++|.
T Consensus        71 ~advvvitag~~~~~g~~~~~~~R~~l~~~N~----~iv~~i~~~i~~~----~p~aivivvtN  126 (150)
T d1t2da1          71 GADVVIVTAGFTKAPGKSDKEWNRDDLLPLNN----KIMIEIGGHIKKN----CPNAFIIVVTN  126 (150)
T ss_dssp             TCSEEEECCSCSSCTTCCSTTCCGGGGHHHHH----HHHHHHHHHHHHH----CTTSEEEECSS
T ss_pred             CCcEEEEecccccCCCCCccccchhHHHHHHH----HHHHHHHHHHHhc----CCCeEEEEecC
Confidence            7899999999754332211 111233455564    4556666666665    35677777775

>d1jqba2 c.2.1.1 (A:1140-1313) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Bacterial secondary alcohol dehydrogenase
species: Clostridium beijerinckii [TaxId: 1520]

Probab=97.26  E-value=0.00079  Score=49.95  Aligned_cols=76  Identities=14%  Similarity=0.104  Sum_probs=50.5

Q ss_pred             EEEEECCCChhHHHHHHHHHHcCC-EEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            2 DIVITGATSGIGTETARVLALRGV-HVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         2 ~vlItG~s~gIG~a~a~~l~~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      +|+|.|+ |++|...++.+...|+ +|+.+++++++.+.+. ++     +... +  +|..+.+..+++ .++.. ...+
T Consensus        30 ~VlI~Ga-G~vGl~~~q~ak~~Ga~~Vi~~d~~~~r~~~a~-~l-----Ga~~-~--i~~~~~~~~~~v-~~~t~-g~G~   97 (174)
T d1jqba2          30 SVVVIGI-GAVGLMGIAGAKLRGAGRIIGVGSRPICVEAAK-FY-----GATD-I--LNYKNGHIEDQV-MKLTN-GKGV   97 (174)
T ss_dssp             CEEEECC-SHHHHHHHHHHHTTTCSCEEEECCCHHHHHHHH-HH-----TCSE-E--ECGGGSCHHHHH-HHHTT-TSCE
T ss_pred             EEEEEcC-CcchhhhhhhhhcccccccccccchhhhHHHHH-hh-----Cccc-c--ccccchhHHHHH-HHHhh-ccCc
Confidence            6899976 8999999998888898 7999999887755443 33     4322 2  244443333332 23222 2369


Q ss_pred             eEEEEcCCC
Q 025509           81 NILINNAGI   89 (251)
Q Consensus        81 d~lv~~ag~   89 (251)
                      |++|.++|.
T Consensus        98 D~vid~~g~  106 (174)
T d1jqba2          98 DRVIMAGGG  106 (174)
T ss_dssp             EEEEECSSC
T ss_pred             ceEEEccCC
Confidence            999999984

>d1tt7a2 c.2.1.1 (A:128-294) Hypothetical protein YhfP {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhfP
species: Bacillus subtilis [TaxId: 1423]

Probab=97.25  E-value=0.0002  Score=53.05  Aligned_cols=73  Identities=22%  Similarity=0.264  Sum_probs=50.2

Q ss_pred             EEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHh--cCCC
Q 025509            2 DIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNI--QHHQ   79 (251)
Q Consensus         2 ~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~--~~g~   79 (251)
                      +|||+||+||+|.+.++.....|++|+.+++++++.+.+.+ +     +....+   |   .++   ...+...  ..++
T Consensus        26 ~VLV~gaaGgVG~~avQlAk~~Ga~Viat~~s~~k~~~~~~-l-----Gad~vi---~---~~~---~~~~~~~~~~~~g   90 (167)
T d1tt7a2          26 SVLVTGATGGVGGIAVSMLNKRGYDVVASTGNREAADYLKQ-L-----GASEVI---S---RED---VYDGTLKALSKQQ   90 (167)
T ss_dssp             CEEEESTTSHHHHHHHHHHHHHTCCEEEEESSSSTHHHHHH-H-----TCSEEE---E---HHH---HCSSCCCSSCCCC
T ss_pred             EEEEeCCcchHHHHHHHHHHHcCCceEEEecCHHHHHHHHh-h-----cccceE---e---ccc---hhchhhhcccCCC
Confidence            69999999999999998888889999999999888666543 2     443322   2   111   1111111  1247


Q ss_pred             eeEEEEcCCC
Q 025509           80 LNILINNAGI   89 (251)
Q Consensus        80 id~lv~~ag~   89 (251)
                      +|+++.+.|-
T Consensus        91 vd~vid~vgg  100 (167)
T d1tt7a2          91 WQGAVDPVGG  100 (167)
T ss_dssp             EEEEEESCCT
T ss_pred             ceEEEecCcH
Confidence            9999999873

>d1o89a2 c.2.1.1 (A:116-292) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=97.24  E-value=0.00025  Score=53.03  Aligned_cols=39  Identities=28%  Similarity=0.429  Sum_probs=35.2

Q ss_pred             EEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHH
Q 025509            2 DIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDV   40 (251)
Q Consensus         2 ~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~   40 (251)
                      +|||+||+||+|...++.....|++|+.+++++++.+.+
T Consensus        34 ~vlV~gasGGVG~~aiQlAk~~Ga~Via~~~~~~k~~~~   72 (177)
T d1o89a2          34 EIVVTGASGGVGSTAVALLHKLGYQVVAVSGRESTHEYL   72 (177)
T ss_dssp             EEEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHHHH
T ss_pred             cEEEEEccccchHHHHHHHHHcCCCeEEEecchhHHHHH
Confidence            699999999999999998888999999999998886544

>d1piwa2 c.2.1.1 (A:153-320) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Cinnamyl alcohol dehydrogenase, ADH6
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=97.16  E-value=0.0018  Score=47.56  Aligned_cols=74  Identities=15%  Similarity=0.188  Sum_probs=49.6

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      .+|+|.|+ |++|...++.+...|++|+++++++++++.+.+ +     +....+...+-.+   .   .+   ...+.+
T Consensus        29 ~~vlI~Ga-G~vG~~a~q~ak~~G~~vi~~~~~~~k~~~a~~-l-----Ga~~~i~~~~~~~---~---~~---~~~~~~   92 (168)
T d1piwa2          29 KKVGIVGL-GGIGSMGTLISKAMGAETYVISRSSRKREDAMK-M-----GADHYIATLEEGD---W---GE---KYFDTF   92 (168)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCEEEEEESSSTTHHHHHH-H-----TCSEEEEGGGTSC---H---HH---HSCSCE
T ss_pred             CEEEEECC-CCcchhHHHHhhhccccccccccchhHHHHhhc-c-----CCcEEeeccchHH---H---HH---hhhccc
Confidence            36899986 899999988877889999999999888765433 3     4433222122111   1   11   223479


Q ss_pred             eEEEEcCCCC
Q 025509           81 NILINNAGIM   90 (251)
Q Consensus        81 d~lv~~ag~~   90 (251)
                      |+++.+.+..
T Consensus        93 d~vi~~~~~~  102 (168)
T d1piwa2          93 DLIVVCASSL  102 (168)
T ss_dssp             EEEEECCSCS
T ss_pred             ceEEEEecCC
Confidence            9999998753

>d2jhfa2 c.2.1.1 (A:164-339) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Horse (Equus caballus) [TaxId: 9796]

Probab=97.15  E-value=0.00094  Score=49.42  Aligned_cols=78  Identities=13%  Similarity=0.109  Sum_probs=52.4

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCC-EEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCC
Q 025509            1 MDIVITGATSGIGTETARVLALRGV-HVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQ   79 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~   79 (251)
                      .+|||.|+ +|+|...+..+...|+ +|+++++++++.+...+ +     +..-.+...|  ..+.+.+..++..  .++
T Consensus        30 dtVlV~Ga-GG~G~~~~~~~~~~g~~~Vi~~~~~~~k~~~a~~-~-----Ga~~~i~~~~--~~~~~~~~~~~~~--~~G   98 (176)
T d2jhfa2          30 STCAVFGL-GGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKE-V-----GATECVNPQD--YKKPIQEVLTEMS--NGG   98 (176)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHH-T-----TCSEEECGGG--CSSCHHHHHHHHT--TSC
T ss_pred             CEEEEECC-CCcHHHHHHHHHHcCCceEEeecCcHHHHHHHHH-h-----CCeeEEecCC--chhHHHHHHHHHh--cCC
Confidence            36999998 6899999999999886 89999999888665433 2     2222211112  2233455455443  247


Q ss_pred             eeEEEEcCCC
Q 025509           80 LNILINNAGI   89 (251)
Q Consensus        80 id~lv~~ag~   89 (251)
                      +|++|.+.|.
T Consensus        99 ~D~vid~~G~  108 (176)
T d2jhfa2          99 VDFSFEVIGR  108 (176)
T ss_dssp             BSEEEECSCC
T ss_pred             CCEEEecCCc
Confidence            9999999984

>d1u7za_ c.72.3.1 (A:) Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Ribokinase-like
superfamily: CoaB-like
family: CoaB-like
domain: Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB)
species: Escherichia coli [TaxId: 562]

Probab=97.10  E-value=0.0014  Score=50.68  Aligned_cols=67  Identities=19%  Similarity=0.228  Sum_probs=47.0

Q ss_pred             CCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCeeEEEEcC
Q 025509            8 ATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQLNILINNA   87 (251)
Q Consensus         8 ~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~id~lv~~a   87 (251)
                      +||-.|.++|++++.+|++|.++......           .+...+..+  .+.+.+++...+.+..   ...|++|++|
T Consensus        30 SSGk~G~aiA~~~~~~Ga~V~li~g~~~~-----------~~p~~~~~~--~~~t~~~m~~~~~~~~---~~~D~~i~aA   93 (223)
T d1u7za_          30 SSGKMGFAIAAAAARRGANVTLVSGPVSL-----------PTPPFVKRV--DVMTALEMEAAVNASV---QQQNIFIGCA   93 (223)
T ss_dssp             CCSHHHHHHHHHHHHTTCEEEEEECSCCC-----------CCCTTEEEE--ECCSHHHHHHHHHHHG---GGCSEEEECC
T ss_pred             CcHHHHHHHHHHHHHcCCchhhhhccccc-----------Ccccccccc--eehhhHHHHHHHHhhh---ccceeEeeee
Confidence            46889999999999999999887764321           113345554  4556667666555443   3679999999


Q ss_pred             CCC
Q 025509           88 GIM   90 (251)
Q Consensus        88 g~~   90 (251)
                      ++.
T Consensus        94 Avs   96 (223)
T d1u7za_          94 AVA   96 (223)
T ss_dssp             BCC
T ss_pred             chh
Confidence            864

>d1uufa2 c.2.1.1 (A:145-312) Hypothetical protein YahK {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YahK
species: Escherichia coli [TaxId: 562]

Probab=97.09  E-value=0.0016  Score=47.70  Aligned_cols=72  Identities=14%  Similarity=0.242  Sum_probs=50.6

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      ++|+|.|+ |+||...++.+...|++++++++++++.+. .+++     +....   .|..+.+...       ....++
T Consensus        32 ~~VlI~Ga-G~vG~~a~qlak~~Ga~~i~~~~~~~~~~~-a~~l-----Gad~~---i~~~~~~~~~-------~~~~~~   94 (168)
T d1uufa2          32 KKVGVVGI-GGLGHMGIKLAHAMGAHVVAFTTSEAKREA-AKAL-----GADEV---VNSRNADEMA-------AHLKSF   94 (168)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSGGGHHH-HHHH-----TCSEE---EETTCHHHHH-------TTTTCE
T ss_pred             CEEEEecc-chHHHHHHHHhhcccccchhhccchhHHHH-Hhcc-----CCcEE---EECchhhHHH-------HhcCCC
Confidence            36899986 899999998888899999999998877543 3344     44322   3555544322       222479


Q ss_pred             eEEEEcCCC
Q 025509           81 NILINNAGI   89 (251)
Q Consensus        81 d~lv~~ag~   89 (251)
                      |++|.++|.
T Consensus        95 D~vid~~g~  103 (168)
T d1uufa2          95 DFILNTVAA  103 (168)
T ss_dssp             EEEEECCSS
T ss_pred             ceeeeeeec
Confidence            999999984

>d1f8fa2 c.2.1.1 (A:163-336) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Benzyl alcohol dehydrogenase
species: Acinetobacter calcoaceticus [TaxId: 471]

Probab=97.06  E-value=0.0015  Score=48.29  Aligned_cols=75  Identities=13%  Similarity=0.123  Sum_probs=48.8

Q ss_pred             EEEEECCCChhHHHHHHHHHHcCCE-EEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            2 DIVITGATSGIGTETARVLALRGVH-VVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         2 ~vlItG~s~gIG~a~a~~l~~~G~~-Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      +|+|.|+ |+||...+..+...|++ |+++++++.+++.+. ++     +.. .++  |..+.+ +.+.++++.  .+++
T Consensus        31 ~VlI~G~-G~iG~~~~~~ak~~g~~~v~~~~~~~~k~~~a~-~~-----Ga~-~~i--~~~~~~-~~~~i~~~t--~gg~   97 (174)
T d1f8fa2          31 SFVTWGA-GAVGLSALLAAKVCGASIIIAVDIVESRLELAK-QL-----GAT-HVI--NSKTQD-PVAAIKEIT--DGGV   97 (174)
T ss_dssp             EEEEESC-SHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHH-HH-----TCS-EEE--ETTTSC-HHHHHHHHT--TSCE
T ss_pred             EEEEeCC-CHHHhhhhhcccccccceeeeeccHHHHHHHHH-Hc-----CCe-EEE--eCCCcC-HHHHHHHHc--CCCC
Confidence            6899987 89999999988888985 556677776655443 33     332 233  444433 333333332  2479


Q ss_pred             eEEEEcCCC
Q 025509           81 NILINNAGI   89 (251)
Q Consensus        81 d~lv~~ag~   89 (251)
                      |++|.+.|.
T Consensus        98 D~vid~~G~  106 (174)
T d1f8fa2          98 NFALESTGS  106 (174)
T ss_dssp             EEEEECSCC
T ss_pred             cEEEEcCCc
Confidence            999999983

>d1id1a_ c.2.1.9 (A:) Rck domain from putative potassium channel Kch {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Rck domain from putative potassium channel Kch
species: Escherichia coli [TaxId: 562]

Probab=97.06  E-value=0.0018  Score=46.68  Aligned_cols=76  Identities=13%  Similarity=0.111  Sum_probs=57.9

Q ss_pred             EEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCee
Q 025509            2 DIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQLN   81 (251)
Q Consensus         2 ~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~id   81 (251)
                      .++|.|. +-+|..+++.|.+.|.+|+++..+++...+..++..    ...+.++..|.++++.++++      .....|
T Consensus         5 HiII~G~-g~~g~~l~~~L~~~~~~v~vId~d~~~~~~~~~~~~----~~~~~vi~Gd~~d~~~L~~a------~i~~a~   73 (153)
T d1id1a_           5 HFIVCGH-SILAINTILQLNQRGQNVTVISNLPEDDIKQLEQRL----GDNADVIPGDSNDSSVLKKA------GIDRCR   73 (153)
T ss_dssp             CEEEECC-SHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHHH----CTTCEEEESCTTSHHHHHHH------TTTTCS
T ss_pred             EEEEECC-CHHHHHHHHHHHHcCCCEEEEeccchhHHHHHHHhh----cCCcEEEEccCcchHHHHHh------ccccCC
Confidence            4777777 699999999999999999999998876655555443    34688999999998766542      123677


Q ss_pred             EEEEcCC
Q 025509           82 ILINNAG   88 (251)
Q Consensus        82 ~lv~~ag   88 (251)
                      .+|...+
T Consensus        74 ~vi~~~~   80 (153)
T d1id1a_          74 AILALSD   80 (153)
T ss_dssp             EEEECSS
T ss_pred             EEEEccc
Confidence            8877764

>d1bg6a2 c.2.1.6 (A:4-187) N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {Arthrobacter, strain 1c [TaxId: 1663]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: N-(1-D-carboxylethyl)-L-norvaline dehydrogenase
species: Arthrobacter, strain 1c [TaxId: 1663]

Probab=97.04  E-value=0.0029  Score=46.62  Aligned_cols=41  Identities=24%  Similarity=0.256  Sum_probs=36.3

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHH
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKE   42 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~   42 (251)
                      |++-|.|+ |.+|.++|..|++.|++|.+.+|++++.+...+
T Consensus         2 k~iaIiGa-G~~G~~~A~~l~~~G~~V~~~~r~~~~~~~~~~   42 (184)
T d1bg6a2           2 KTYAVLGL-GNGGHAFAAYLALKGQSVLAWDIDAQRIKEIQD   42 (184)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHH
T ss_pred             CEEEEECc-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH
Confidence            67889988 899999999999999999999999877766554

>d1llua2 c.2.1.1 (A:144-309) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=96.99  E-value=0.0027  Score=46.23  Aligned_cols=74  Identities=16%  Similarity=0.155  Sum_probs=48.2

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      ++|+|.|+ |++|...+..+...|++|+.+++++.+.+...+ +     +... +  .|.++.+..+.+.+.    .++.
T Consensus        29 ~~VlV~Ga-G~vG~~~~~~ak~~G~~Vi~~~~~~~~~~~a~~-~-----Ga~~-~--i~~~~~~~~~~~~~~----~~g~   94 (166)
T d1llua2          29 QWVAISGI-GGLGHVAVQYARAMGLHVAAIDIDDAKLELARK-L-----GASL-T--VNARQEDPVEAIQRD----IGGA   94 (166)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH-T-----TCSE-E--EETTTSCHHHHHHHH----HSSE
T ss_pred             CEEEEeec-cccHHHHHHHHHHcCCccceecchhhHHHhhhc-c-----Cccc-c--ccccchhHHHHHHHh----hcCC
Confidence            36899876 999999998888889999999999877654432 2     3322 2  245554444443332    2346


Q ss_pred             eEEEEcCC
Q 025509           81 NILINNAG   88 (251)
Q Consensus        81 d~lv~~ag   88 (251)
                      +.+|.+++
T Consensus        95 ~~~i~~~~  102 (166)
T d1llua2          95 HGVLVTAV  102 (166)
T ss_dssp             EEEEECCS
T ss_pred             cccccccc
Confidence            66666665

>d2pv7a2 c.2.1.6 (A:92-243) Prephenate dehydrogenase TyrA {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Haemophilus influenzae [TaxId: 727]

Probab=96.99  E-value=0.0017  Score=46.72  Aligned_cols=79  Identities=18%  Similarity=0.101  Sum_probs=52.5

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      |+|.|.||.|-+|..+|+.|.++|++|.+.+|+.....+...   +   .....+...++   .++...+.++.....+=
T Consensus        10 ~kI~iIGg~G~mG~~la~~L~~~G~~V~~~d~~~~~~~~~~~---~---~~~~v~~~~~~---~~~~~v~~~~~~~~~~~   80 (152)
T d2pv7a2          10 HKIVIVGGYGKLGGLFARYLRASGYPISILDREDWAVAESIL---A---NADVVIVSVPI---NLTLETIERLKPYLTEN   80 (152)
T ss_dssp             CCEEEETTTSHHHHHHHHHHHTTTCCEEEECTTCGGGHHHHH---T---TCSEEEECSCG---GGHHHHHHHHGGGCCTT
T ss_pred             CeEEEEcCCCHHHHHHHHHHHHcCCCcEecccccccccchhh---h---hccccccccch---hhheeeeecccccccCC
Confidence            479999999999999999999999999999998765443221   1   34444444443   44555666665443322


Q ss_pred             eEEEEcCC
Q 025509           81 NILINNAG   88 (251)
Q Consensus        81 d~lv~~ag   88 (251)
                      .+++..++
T Consensus        81 ~iiiD~~S   88 (152)
T d2pv7a2          81 MLLADLTS   88 (152)
T ss_dssp             SEEEECCS
T ss_pred             ceEEEecc
Confidence            35555544

>d1d1ta2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=96.92  E-value=0.0027  Score=46.98  Aligned_cols=77  Identities=13%  Similarity=0.099  Sum_probs=51.5

Q ss_pred             EEEEECCCChhHHHHHHHHHHcCC-EEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            2 DIVITGATSGIGTETARVLALRGV-HVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         2 ~vlItG~s~gIG~a~a~~l~~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      +|+|.|+ ||+|...+..+...|+ +|+.+++++++++-..+ +     +....+-.-|-.+  ..+...+...  .+++
T Consensus        32 tVlI~G~-GgvGl~ai~~ak~~G~~~Vi~vd~~~~kl~~Ak~-~-----GA~~~in~~~~~~--~~~~~~~~~~--g~G~  100 (176)
T d1d1ta2          32 TCVVFGL-GGVGLSVIMGCKSAGASRIIGIDLNKDKFEKAMA-V-----GATECISPKDSTK--PISEVLSEMT--GNNV  100 (176)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHH-H-----TCSEEECGGGCSS--CHHHHHHHHH--TSCC
T ss_pred             EEEEECC-CchhHHHHHHHHHcCCceEEEecCcHHHHHHHHh-c-----CCcEEECccccch--HHHHHHHHhc--cccc
Confidence            6899976 8999999999999996 89999999988775443 3     4443332222221  1222222222  2379


Q ss_pred             eEEEEcCCC
Q 025509           81 NILINNAGI   89 (251)
Q Consensus        81 d~lv~~ag~   89 (251)
                      |++|.+.|.
T Consensus       101 d~vi~~~g~  109 (176)
T d1d1ta2         101 GYTFEVIGH  109 (176)
T ss_dssp             CEEEECSCC
T ss_pred             eEEEEeCCc
Confidence            999999984

>d1h2ba2 c.2.1.1 (A:155-326) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Aeropyrum pernix [TaxId: 56636]

Probab=96.88  E-value=0.0034  Score=46.08  Aligned_cols=75  Identities=16%  Similarity=0.198  Sum_probs=48.5

Q ss_pred             EEEEECCCChhHHHHHHHHHHcCC-EEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            2 DIVITGATSGIGTETARVLALRGV-HVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         2 ~vlItG~s~gIG~a~a~~l~~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      +|+|.|+ |++|...+..+...|+ +|+.+++++++++...+ +     +.. .++  |.. .+.+++..+..  ...++
T Consensus        35 ~vli~Ga-G~vG~~~~~~a~~~g~~~vv~~~~~~~k~~~~~~-~-----ga~-~~i--~~~-~~~~~~~~~~~--~~~g~  101 (172)
T d1h2ba2          35 YVAIVGV-GGLGHIAVQLLKVMTPATVIALDVKEEKLKLAER-L-----GAD-HVV--DAR-RDPVKQVMELT--RGRGV  101 (172)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHCCCEEEEEESSHHHHHHHHH-T-----TCS-EEE--ETT-SCHHHHHHHHT--TTCCE
T ss_pred             EEEEeCC-ChHHHHHHHHHHhhcCcccccccchhHHHHHHhh-c-----ccc-eee--cCc-ccHHHHHHHhh--CCCCc
Confidence            6888875 9999999998888886 67778888766554432 1     222 223  333 23444444332  22369


Q ss_pred             eEEEEcCCC
Q 025509           81 NILINNAGI   89 (251)
Q Consensus        81 d~lv~~ag~   89 (251)
                      |++|.++|.
T Consensus       102 d~vid~~g~  110 (172)
T d1h2ba2         102 NVAMDFVGS  110 (172)
T ss_dssp             EEEEESSCC
T ss_pred             eEEEEecCc
Confidence            999999983

>d1f0ya2 c.2.1.6 (A:12-203) Short chain L-3-hydroxyacyl CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Short chain L-3-hydroxyacyl CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.75  E-value=0.0017  Score=48.89  Aligned_cols=45  Identities=22%  Similarity=0.223  Sum_probs=38.9

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHh
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVK   46 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~   46 (251)
                      |+|.|.|+ |-+|..+|..++..|++|++.+++++.+++..+.+.+
T Consensus         5 kkvaViGa-G~mG~~iA~~~a~~G~~V~l~D~~~~~l~~a~~~i~~   49 (192)
T d1f0ya2           5 KHVTVIGG-GLMGAGIAQVAAATGHTVVLVDQTEDILAKSKKGIEE   49 (192)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHHH
T ss_pred             EEEEEECc-CHHHHHHHHHHHhCCCcEEEEECChHHHHHHHhhHHH
Confidence            57899998 7799999999999999999999999887777665543

>d1e3ia2 c.2.1.1 (A:168-341) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Mouse (Mus musculus), class II [TaxId: 10090]

Probab=96.73  E-value=0.0036  Score=46.23  Aligned_cols=77  Identities=12%  Similarity=0.112  Sum_probs=50.7

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCC-EEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCC-CHHHHHHHHHHHHhcCC
Q 025509            1 MDIVITGATSGIGTETARVLALRGV-HVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLS-SLASVRNFASEYNIQHH   78 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~-~~~~i~~~~~~~~~~~g   78 (251)
                      .+|+|.| .|+||...+..+...|+ +|+++++++++++-.. ++     +... ++  |.. ..+..+...++..  .+
T Consensus        30 ~~VlV~G-~G~iGl~a~~~ak~~Ga~~Vi~~d~~~~r~~~a~-~~-----Ga~~-~i--~~~~~~~~~~~~~~~~~--~~   97 (174)
T d1e3ia2          30 STCAVFG-LGCVGLSAIIGCKIAGASRIIAIDINGEKFPKAK-AL-----GATD-CL--NPRELDKPVQDVITELT--AG   97 (174)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHH-HT-----TCSE-EE--CGGGCSSCHHHHHHHHH--TS
T ss_pred             CEEEEEC-CChHHHHHHHHHHHhCCceeeeeccchHHHHHHH-Hh-----CCCc-cc--CCccchhhhhhhHhhhh--cC
Confidence            3689997 59999999999999998 6888899887754333 23     3322 22  222 1223344444432  34


Q ss_pred             CeeEEEEcCCC
Q 025509           79 QLNILINNAGI   89 (251)
Q Consensus        79 ~id~lv~~ag~   89 (251)
                      ++|++|.++|.
T Consensus        98 G~d~vie~~G~  108 (174)
T d1e3ia2          98 GVDYSLDCAGT  108 (174)
T ss_dssp             CBSEEEESSCC
T ss_pred             CCcEEEEeccc
Confidence            79999999983

>d2pgda2 c.2.1.6 (A:1-176) 6-phosphogluconate dehydrogenase {Sheep (Ovis orientalis aries) [TaxId: 9940]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: 6-phosphogluconate dehydrogenase
species: Sheep (Ovis orientalis aries) [TaxId: 9940]

Probab=96.67  E-value=0.008  Score=44.23  Aligned_cols=84  Identities=19%  Similarity=0.208  Sum_probs=58.0

Q ss_pred             EEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHH---------------HHhhCCCCceEEEEecCCCHHHH
Q 025509            2 DIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKET---------------IVKEIPSAKVDAMELDLSSLASV   66 (251)
Q Consensus         2 ~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~---------------~~~~~~~~~v~~~~~D~~~~~~i   66 (251)
                      +|-|.|- |-+|.++|+.|+++|++|++.+|++++.+++.+.               +.+..  .....+...+.+.+.+
T Consensus         4 nIg~IGl-G~MG~~mA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~--~~~~~ii~~~~~~~~v   80 (176)
T d2pgda2           4 DIALIGL-AVMGQNLILNMNDHGFVVCAFNRTVSKVDDFLANEAKGTKVLGAHSLEEMVSKL--KKPRRIILLVKAGQAV   80 (176)
T ss_dssp             SEEEECC-SHHHHHHHHHHHHTTCCEEEECSSTHHHHHHHHTTTTTSSCEECSSHHHHHHHB--CSSCEEEECSCTTHHH
T ss_pred             cEEEEeE-hHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHhccccccccchhhhhhhhhhh--cccceEEEecCchHHH
Confidence            3556665 8999999999999999999999999888876543               11111  1223444456667788


Q ss_pred             HHHHHHHHhcCCCeeEEEEcCC
Q 025509           67 RNFASEYNIQHHQLNILINNAG   88 (251)
Q Consensus        67 ~~~~~~~~~~~g~id~lv~~ag   88 (251)
                      ....+.+.....+=+++|.+..
T Consensus        81 ~~v~~~l~~~~~~g~iiid~sT  102 (176)
T d2pgda2          81 DNFIEKLVPLLDIGDIIIDGGN  102 (176)
T ss_dssp             HHHHHHHHHHCCTTCEEEECSC
T ss_pred             HHHHHHHHhccccCcEEEecCc
Confidence            8777777665444456666654

>d5mdha1 c.2.1.5 (A:1-154) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=96.63  E-value=0.017  Score=41.49  Aligned_cols=117  Identities=14%  Similarity=0.085  Sum_probs=63.3

Q ss_pred             EEEEECCCChhHHHHHHHHHHcCC-------EEEEEecCc--hhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHH
Q 025509            2 DIVITGATSGIGTETARVLALRGV-------HVVMGVRDI--AAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASE   72 (251)
Q Consensus         2 ~vlItG~s~gIG~a~a~~l~~~G~-------~Vi~~~r~~--~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~   72 (251)
                      +|.|+||+|.+|++++-.|++.+.       .+++.+.++  .+++....++..... .....+..- ++.+        
T Consensus         5 KV~IiGA~G~VG~~la~~l~~~~~~~~~~~~~L~l~d~~~~~~~~~~l~~~~~~~~~-~~~~~~~~~-~~~~--------   74 (154)
T d5mdha1           5 RVLVTGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDITPMMGVLDGVLMELQDCAL-PLLKDVIAT-DKEE--------   74 (154)
T ss_dssp             EEEESSTTSHHHHTTHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTCC-TTEEEEEEE-SCHH--------
T ss_pred             EEEEECCCCHHHHHHHHHHHHHHhcCCCCccEEEEecCccchhhhhhhhhhhccccc-ccccccccC-cccc--------
Confidence            689999999999999999986542       355555443  334444444433221 122222211 1111        


Q ss_pred             HHhcCCCeeEEEEcCCCCCCCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcC
Q 025509           73 YNIQHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSS  141 (251)
Q Consensus        73 ~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS  141 (251)
                        +.....|++|..+|....+.+ +.++   .++.|.    .+++...+.+.+...   ..+.++.+|.
T Consensus        75 --~~~~~~dvVVitag~~~~~g~-sr~d---ll~~N~----~i~k~~~~~i~k~a~---~~~~iivvsN  130 (154)
T d5mdha1          75 --IAFKDLDVAILVGSMPRRDGM-ERKD---LLKANV----KIFKCQGAALDKYAK---KSVKVIVVGN  130 (154)
T ss_dssp             --HHTTTCSEEEECCSCCCCTTC-CTTT---THHHHH----HHHHHHHHHHHHHSC---TTCEEEECSS
T ss_pred             --cccCCceEEEEecccCCCCCC-chhH---HHHHhH----HHHHHHHHHHHhhCC---CceEEEEecC
Confidence              112378999999997654322 2222   244443    455666666655421   2345556553

>d2fzwa2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=96.62  E-value=0.0033  Score=46.17  Aligned_cols=77  Identities=9%  Similarity=0.049  Sum_probs=50.7

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCC-EEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCC-CHHHHHHHHHHHHhcCC
Q 025509            1 MDIVITGATSGIGTETARVLALRGV-HVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLS-SLASVRNFASEYNIQHH   78 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~-~~~~i~~~~~~~~~~~g   78 (251)
                      .+|||.|+ +|+|...+..+...|+ +|+.+++++++.+. .+++     +..-. +  |.. +.+.+.+.+++..  .+
T Consensus        30 ~tVlI~Ga-GGvG~~aiq~ak~~G~~~vi~~~~~~~k~~~-ak~l-----Ga~~~-i--~~~~~~~~~~~~~~~~~--~~   97 (176)
T d2fzwa2          30 SVCAVFGL-GGVGLAVIMGCKVAGASRIIGVDINKDKFAR-AKEF-----GATEC-I--NPQDFSKPIQEVLIEMT--DG   97 (176)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHHH-HHHH-----TCSEE-E--CGGGCSSCHHHHHHHHT--TS
T ss_pred             CEEEEecc-hhHHHHHHHHHHHHhcCceEEEcccHHHHHH-HHHh-----CCcEE-E--eCCchhhHHHHHHHHHc--CC
Confidence            36899987 5999999999999997 67777787777543 3444     43322 2  222 2233444444442  34


Q ss_pred             CeeEEEEcCCC
Q 025509           79 QLNILINNAGI   89 (251)
Q Consensus        79 ~id~lv~~ag~   89 (251)
                      ++|++|.+.|.
T Consensus        98 g~D~vid~~G~  108 (176)
T d2fzwa2          98 GVDYSFECIGN  108 (176)
T ss_dssp             CBSEEEECSCC
T ss_pred             CCcEeeecCCC
Confidence            79999999983

>d1p0fa2 c.2.1.1 (A:1164-1337) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Frog (Rana perezi) [TaxId: 8403]

Probab=96.60  E-value=0.0041  Score=45.87  Aligned_cols=77  Identities=12%  Similarity=0.103  Sum_probs=51.8

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCC-EEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHH-HHHHHHHHHHhcCC
Q 025509            1 MDIVITGATSGIGTETARVLALRGV-HVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLA-SVRNFASEYNIQHH   78 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~-~i~~~~~~~~~~~g   78 (251)
                      .+|+|.|+ ||+|...+..+...|+ +|+.+++++++++...+ +     +.... +  |.++.+ .+.+...+.  ..+
T Consensus        29 ~~VlV~Ga-GgvGl~a~~~ak~~G~~~Vi~~d~~~~kl~~a~~-l-----Ga~~~-i--~~~~~d~~~~~~~~~~--~~~   96 (174)
T d1p0fa2          29 STCAVFGL-GGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAIE-L-----GATEC-L--NPKDYDKPIYEVICEK--TNG   96 (174)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHH-T-----TCSEE-E--CGGGCSSCHHHHHHHH--TTS
T ss_pred             CEEEEECC-CchhHHHHHHHHHcCCceeeccCChHHHHHHHHH-c-----CCcEE-E--cCCCchhHHHHHHHHh--cCC
Confidence            36899985 8999999999999997 79999999888765543 2     33222 2  333222 233333333  234


Q ss_pred             CeeEEEEcCCC
Q 025509           79 QLNILINNAGI   89 (251)
Q Consensus        79 ~id~lv~~ag~   89 (251)
                      .+|++|.++|.
T Consensus        97 G~d~vid~~g~  107 (174)
T d1p0fa2          97 GVDYAVECAGR  107 (174)
T ss_dssp             CBSEEEECSCC
T ss_pred             CCcEEEEcCCC
Confidence            79999999984

>d1npya1 c.2.1.7 (A:103-269) Shikimate 5-dehydrogenase-like protein HI0607 {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase-like protein HI0607
species: Haemophilus influenzae [TaxId: 727]

Probab=96.58  E-value=0.0016  Score=47.85  Aligned_cols=43  Identities=12%  Similarity=0.354  Sum_probs=37.0

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCC-EEEEEecCchhHHHHHHHH
Q 025509            1 MDIVITGATSGIGTETARVLALRGV-HVVMGVRDIAAGKDVKETI   44 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~-~Vi~~~r~~~~~~~~~~~~   44 (251)
                      |+|||.|+ ||.+++++..|.+.|+ +|.++.|+.++.+.+.+.+
T Consensus        18 ~~vlIlGa-GGaarai~~aL~~~g~~~I~I~nR~~~ka~~L~~~~   61 (167)
T d1npya1          18 AKVIVHGS-GGMAKAVVAAFKNSGFEKLKIYARNVKTGQYLAALY   61 (167)
T ss_dssp             SCEEEECS-STTHHHHHHHHHHTTCCCEEEECSCHHHHHHHHHHH
T ss_pred             CeEEEECC-CHHHHHHHHHHHHCCCCEEEEecccHHHHHHHHHhh
Confidence            46889976 8999999999999998 7999999998888776554

>d1nvta1 c.2.1.7 (A:111-287) Shikimate 5-dehydrogenase AroE {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=96.52  E-value=0.0015  Score=48.51  Aligned_cols=75  Identities=21%  Similarity=0.338  Sum_probs=52.5

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEE-ecCCCHHHHHHHHHHHHhcCCC
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAME-LDLSSLASVRNFASEYNIQHHQ   79 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~-~D~~~~~~i~~~~~~~~~~~g~   79 (251)
                      |+|||.|+ ||.+++++..|.+.| +|.++.|+.+++++..+.+.+.........+. .|+.             .....
T Consensus        19 k~vlIlGa-GG~arai~~aL~~~~-~i~I~nR~~~ka~~l~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~   83 (177)
T d1nvta1          19 KNIVIYGA-GGAARAVAFELAKDN-NIIIANRTVEKAEALAKEIAEKLNKKFGEEVKFSGLD-------------VDLDG   83 (177)
T ss_dssp             CEEEEECC-SHHHHHHHHHHTSSS-EEEEECSSHHHHHHHHHHHHHHHTCCHHHHEEEECTT-------------CCCTT
T ss_pred             CEEEEECC-cHHHHHHHHHHcccc-ceeeehhhhhHHHHHHHHHHHhhchhhhhhhhhhhhh-------------hccch
Confidence            57899975 689999999998777 99999999999999988886654322111111 1111             12246


Q ss_pred             eeEEEEcCCCC
Q 025509           80 LNILINNAGIM   90 (251)
Q Consensus        80 id~lv~~ag~~   90 (251)
                      .|++||+....
T Consensus        84 ~dliIn~tp~g   94 (177)
T d1nvta1          84 VDIIINATPIG   94 (177)
T ss_dssp             CCEEEECSCTT
T ss_pred             hhhhccCCccc
Confidence            89999998753

>d1kola2 c.2.1.1 (A:161-355) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Formaldehyde dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=96.49  E-value=0.0053  Score=46.16  Aligned_cols=77  Identities=14%  Similarity=0.158  Sum_probs=49.9

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCC-EEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCC
Q 025509            1 MDIVITGATSGIGTETARVLALRGV-HVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQ   79 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~   79 (251)
                      .+|||.|+ |++|...+..+...|+ +|+++++++.+++.+.+ +     +...  + .|-.+. ++.+.+.++. ....
T Consensus        27 ~tVlV~Ga-G~vGl~a~~~ak~~ga~~Vi~~d~~~~rl~~a~~-~-----Ga~~--~-~~~~~~-~~~~~i~~~t-~g~g   94 (195)
T d1kola2          27 STVYVAGA-GPVGLAAAASARLLGAAVVIVGDLNPARLAHAKA-Q-----GFEI--A-DLSLDT-PLHEQIAALL-GEPE   94 (195)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHH-T-----TCEE--E-ETTSSS-CHHHHHHHHH-SSSC
T ss_pred             CEEEEECc-CHHHHHHHHHHHhhcccceeeecccchhhHhhhh-c-----cccE--E-EeCCCc-CHHHHHHHHh-CCCC
Confidence            37899986 8999888888777787 78999998877654432 2     3322  2 233333 3333333332 2347


Q ss_pred             eeEEEEcCCC
Q 025509           80 LNILINNAGI   89 (251)
Q Consensus        80 id~lv~~ag~   89 (251)
                      +|++|.+.|.
T Consensus        95 ~D~vid~vG~  104 (195)
T d1kola2          95 VDCAVDAVGF  104 (195)
T ss_dssp             EEEEEECCCT
T ss_pred             cEEEEECccc
Confidence            9999999985

>d1ks9a2 c.2.1.6 (A:1-167) Ketopantoate reductase PanE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Ketopantoate reductase PanE
species: Escherichia coli [TaxId: 562]

Probab=96.38  E-value=0.002  Score=46.78  Aligned_cols=35  Identities=23%  Similarity=0.238  Sum_probs=32.3

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchh
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAA   36 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~   36 (251)
                      |+|+|.|+ |.||..++..|++.|++|.+++|++..
T Consensus         1 MkI~IiGa-G~iG~~~a~~L~~~G~~V~~~~r~~~~   35 (167)
T d1ks9a2           1 MKITVLGC-GALGQLWLTALCKQGHEVQGWLRVPQP   35 (167)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCCS
T ss_pred             CEEEEECc-CHHHHHHHHHHHHCCCceEEEEcCHHH
Confidence            68999988 999999999999999999999998754

>d1rjwa2 c.2.1.1 (A:138-305) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=96.36  E-value=0.007  Score=43.88  Aligned_cols=39  Identities=18%  Similarity=0.093  Sum_probs=32.4

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHH
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDV   40 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~   40 (251)
                      ++|||.|+ |+||...+..+...|++|+++++++++.+..
T Consensus        29 ~~vlv~G~-G~iG~~a~~~a~~~g~~v~~~~~~~~r~~~~   67 (168)
T d1rjwa2          29 EWVAIYGI-GGLGHVAVQYAKAMGLNVVAVDIGDEKLELA   67 (168)
T ss_dssp             CEEEEECC-STTHHHHHHHHHHTTCEEEEECSCHHHHHHH
T ss_pred             CEEEEeec-ccchhhhhHHHhcCCCeEeccCCCHHHhhhh
Confidence            36888865 9999999888888999999999988876544

>d1jw9b_ c.111.1.1 (B:) Molybdenum cofactor biosynthesis protein MoeB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Molybdenum cofactor biosynthesis protein MoeB
domain: Molybdenum cofactor biosynthesis protein MoeB
species: Escherichia coli [TaxId: 562]

Probab=96.36  E-value=0.018  Score=44.63  Aligned_cols=78  Identities=15%  Similarity=0.321  Sum_probs=53.6

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCC-EEEEEecC-------------------chhHHHHHHHHHhhCCCCceEEEEecC
Q 025509            1 MDIVITGATSGIGTETARVLALRGV-HVVMGVRD-------------------IAAGKDVKETIVKEIPSAKVDAMELDL   60 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~-~Vi~~~r~-------------------~~~~~~~~~~~~~~~~~~~v~~~~~D~   60 (251)
                      ++|+|.| .||+|.+++..|++.|. ++.+++.+                   ..+.+.+.+.+.+..|...+..+...+
T Consensus        31 ~~VliiG-~GglGs~va~~La~~Gvg~i~lvD~D~Ve~sNL~RQ~l~~~~diG~~K~~~a~~~l~~~np~~~i~~~~~~~  109 (247)
T d1jw9b_          31 SRVLIVG-LGGLGCAASQYLASAGVGNLTLLDFDTVSLSNLQRQTLHSDATVGQPKVESARDALTRINPHIAITPVNALL  109 (247)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHHTCSEEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEECSCC
T ss_pred             CCEEEEC-CCHHHHHHHHHHHHcCCCeEEEECCcccchhhhhhhccccHhhcCchHHHHHHHHHHHhhcccchhhhhhhh
Confidence            4689998 67899999999999998 88998754                   225666677777777666666665444


Q ss_pred             CCHHHHHHHHHHHHhcCCCeeEEEEcC
Q 025509           61 SSLASVRNFASEYNIQHHQLNILINNA   87 (251)
Q Consensus        61 ~~~~~i~~~~~~~~~~~g~id~lv~~a   87 (251)
                      .+ +.......       ..|++|.+.
T Consensus       110 ~~-~~~~~~~~-------~~divid~~  128 (247)
T d1jw9b_         110 DD-AELAALIA-------EHDLVLDCT  128 (247)
T ss_dssp             CH-HHHHHHHH-------TSSEEEECC
T ss_pred             hh-cccccccc-------ccceeeecc
Confidence            43 33332222       567777655

>d1wdka3 c.2.1.6 (A:311-496) Fatty oxidation complex alpha subunit, middle domain {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Fatty oxidation complex alpha subunit, middle domain
species: Pseudomonas fragi [TaxId: 296]

Probab=96.29  E-value=0.0028  Score=47.39  Aligned_cols=82  Identities=11%  Similarity=0.096  Sum_probs=53.2

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHh-----
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNI-----   75 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~-----   75 (251)
                      |+|.|.|+ |-+|..+|..++..|++|++.+++++.+++..+.+.+.....    ..-.....+.....+..+..     
T Consensus         5 ~~vaViGa-G~mG~~iA~~~a~~G~~V~l~D~~~~~l~~~~~~i~~~l~~~----~~~~~~~~~~~~~~~~~i~~~~~~~   79 (186)
T d1wdka3           5 KQAAVLGA-GIMGGGIAYQSASKGTPILMKDINEHGIEQGLAEAAKLLVGR----VDKGRMTPAKMAEVLNGIRPTLSYG   79 (186)
T ss_dssp             SSEEEECC-HHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHHHHHHHHH----HTTTSSCHHHHHHHHHHEEEESSST
T ss_pred             CEEEEECc-CHHHHHHHHHHHhCCCeEEEEECCHHHHhhhhhhhhhhHHhh----hcccccchhhhhhhhceeecccccc
Confidence            46889998 789999999999999999999999988777666554321100    00112345555555554421     


Q ss_pred             cCCCeeEEEEcC
Q 025509           76 QHHQLNILINNA   87 (251)
Q Consensus        76 ~~g~id~lv~~a   87 (251)
                      .....|.+|-+.
T Consensus        80 ~~~~adlViEav   91 (186)
T d1wdka3          80 DFGNVDLVVEAV   91 (186)
T ss_dssp             TGGGCSEEEECC
T ss_pred             cccccceeeeee
Confidence            122456666655

>d1vpda2 c.2.1.6 (A:3-163) Hydroxyisobutyrate dehydrogenase {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Salmonella typhimurium [TaxId: 90371]

Probab=96.22  E-value=0.0063  Score=44.13  Aligned_cols=87  Identities=18%  Similarity=0.171  Sum_probs=53.1

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCC-----CCceEEEEecCCCHHHHHHHHH---H
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIP-----SAKVDAMELDLSSLASVRNFAS---E   72 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~-----~~~v~~~~~D~~~~~~i~~~~~---~   72 (251)
                      |+|-|.| .|-+|.++|+.|+++|++|++.+|++++.++..+.-.....     -....++..=+.+.+.++.++.   .
T Consensus         1 MkIgiIG-lG~MG~~~A~~L~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~e~~~~~d~ii~~v~~~~~v~~v~~~~~~   79 (161)
T d1vpda2           1 MKVGFIG-LGIMGKPMSKNLLKAGYSLVVSDRNPEAIADVIAAGAETASTAKAIAEQCDVIITMLPNSPHVKEVALGENG   79 (161)
T ss_dssp             CEEEEEC-CSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCEECSSHHHHHHHCSEEEECCSSHHHHHHHHHSTTC
T ss_pred             CEEEEEe-hhHHHHHHHHHHHHCCCeEEEEeCCcchhHHHHHhhhhhcccHHHHHhCCCeEEEEcCCHHHHHHHHhCCcc
Confidence            4566775 48999999999999999999999998887776542100000     0123334444566777777652   2


Q ss_pred             HHhcCCCeeEEEEcCC
Q 025509           73 YNIQHHQLNILINNAG   88 (251)
Q Consensus        73 ~~~~~g~id~lv~~ag   88 (251)
                      +.....+=+++|.+..
T Consensus        80 ~~~~~~~g~iiid~sT   95 (161)
T d1vpda2          80 IIEGAKPGTVLIDMSS   95 (161)
T ss_dssp             HHHHCCTTCEEEECSC
T ss_pred             hhhccCCCCEEEECCC
Confidence            3332223345555543

>d1yovb1 c.111.1.2 (B:12-437) UBA3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Ubiquitin activating enzymes (UBA)
domain: UBA3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.21  E-value=0.0045  Score=52.39  Aligned_cols=60  Identities=22%  Similarity=0.330  Sum_probs=45.5

Q ss_pred             EEEEECCCChhHHHHHHHHHHcCC-EEEEEecC-------------------chhHHHHHHHHHhhCCCCceEEEEecCC
Q 025509            2 DIVITGATSGIGTETARVLALRGV-HVVMGVRD-------------------IAAGKDVKETIVKEIPSAKVDAMELDLS   61 (251)
Q Consensus         2 ~vlItG~s~gIG~a~a~~l~~~G~-~Vi~~~r~-------------------~~~~~~~~~~~~~~~~~~~v~~~~~D~~   61 (251)
                      +|||.|+ ||||.++++.|+..|. ++.+++.+                   ..+++-+.+.+.+..|..++..+..++.
T Consensus        39 kVlvvG~-GglG~ei~k~L~~~Gvg~i~lvD~D~Ve~sNL~RQflf~~~diG~~Ka~~a~~~l~~~np~v~i~~~~~~i~  117 (426)
T d1yovb1          39 KVLVIGA-GGLGCELLKNLALSGFRQIHVIDMDTIDVSNLNRQFLFRPKDIGRPKAEVAAEFLNDRVPNCNVVPHFNKIQ  117 (426)
T ss_dssp             CEEEECS-STTHHHHHHHHHTTTCCCEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHSTTCCCEEECSCGG
T ss_pred             eEEEECC-CHHHHHHHHHHHHcCCCeEEEEECCCcchhhhcccccCChhHcCcHHHHHHHHHHHhhCCCCceEeeecccc
Confidence            5899987 6799999999999998 78888765                   1246666777777777766666665554


Q ss_pred             C
Q 025509           62 S   62 (251)
Q Consensus        62 ~   62 (251)
                      +
T Consensus       118 ~  118 (426)
T d1yovb1         118 D  118 (426)
T ss_dssp             G
T ss_pred             c
Confidence            3

>d1vm6a3 c.2.1.3 (A:1-96,A:183-214) Dihydrodipicolinate reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=96.08  E-value=0.014  Score=40.66  Aligned_cols=74  Identities=19%  Similarity=0.288  Sum_probs=55.0

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEE-EecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCC
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVM-GVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQ   79 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~-~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~   79 (251)
                      +++.|.|++|-+|+++++.+.+.|++++. ++++...          ...+  .. +..|+|.++...+.++...+.  +
T Consensus         1 mki~i~G~~GrMG~~i~~~~~~~~~~l~~~id~~~~~----------~~~~--~D-VvIDFS~p~~~~~~l~~~~~~--~   65 (128)
T d1vm6a3           1 MKYGIVGYSGRMGQEIQKVFSEKGHELVLKVDVNGVE----------ELDS--PD-VVIDFSSPEALPKTVDLCKKY--R   65 (128)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEEETTEEE----------ECSC--CS-EEEECSCGGGHHHHHHHHHHH--T
T ss_pred             CEEEEECCCCHHHHHHHHHHhcCCCeEEEEECCCcHH----------Hhcc--CC-EEEEecCHHHHHHHHHHHHhc--C
Confidence            57999999999999999999899998764 4443221          1112  22 356999999999999987655  4


Q ss_pred             eeEEEEcCCC
Q 025509           80 LNILINNAGI   89 (251)
Q Consensus        80 id~lv~~ag~   89 (251)
                      +-+|+-..|+
T Consensus        66 ~p~ViGTTG~   75 (128)
T d1vm6a3          66 AGLVLGTTAL   75 (128)
T ss_dssp             CEEEECCCSC
T ss_pred             CCEEEEcCCC
Confidence            6688888885

>d1wxxa2 c.66.1.51 (A:65-382) Hypothetical protein TTHA1280, middle and C-terminal domains {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Hypothetical protein TTHA1280, middle and C-terminal domains
species: Thermus thermophilus [TaxId: 274]

Probab=95.98  E-value=0.18  Score=40.33  Aligned_cols=78  Identities=13%  Similarity=0.073  Sum_probs=51.1

Q ss_pred             EEEEECCC-ChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            2 DIVITGAT-SGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         2 ~vlItG~s-~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      +||=.++. ||++.+    ++..+.+|+.++.++..++.+.+.+....- .++.++..|..+      ..+.+.....++
T Consensus       148 rVLDl~~gtG~~s~~----~a~g~~~V~~vD~s~~al~~a~~n~~~ngl-~~~~~i~~d~~~------~~~~~~~~~~~f  216 (318)
T d1wxxa2         148 RALDVFSYAGGFALH----LALGFREVVAVDSSAEALRRAEENARLNGL-GNVRVLEANAFD------LLRRLEKEGERF  216 (318)
T ss_dssp             EEEEETCTTTHHHHH----HHHHEEEEEEEESCHHHHHHHHHHHHHTTC-TTEEEEESCHHH------HHHHHHHTTCCE
T ss_pred             eeeccCCCCcHHHHH----HHhcCCcEEeecchHHHHHHHHHHHHHcCC-CCcceeeccHHH------HhhhhHhhhcCC
Confidence            34444444 555443    344566999999999988888888766532 358888888733      222333334589


Q ss_pred             eEEEEcCCCC
Q 025509           81 NILINNAGIM   90 (251)
Q Consensus        81 d~lv~~ag~~   90 (251)
                      |.||.+...+
T Consensus       217 D~Vi~DpP~~  226 (318)
T d1wxxa2         217 DLVVLDPPAF  226 (318)
T ss_dssp             EEEEECCCCS
T ss_pred             CEEEEcCCcc
Confidence            9999998643

>d1cdoa2 c.2.1.1 (A:165-339) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Cod (Gadus callarias) [TaxId: 8053]

Probab=95.94  E-value=0.022  Score=41.40  Aligned_cols=76  Identities=9%  Similarity=0.086  Sum_probs=47.8

Q ss_pred             EEEEECCCChhHHHHHHHHHHcCC-EEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHH-HHHHHHHHHHhcCCC
Q 025509            2 DIVITGATSGIGTETARVLALRGV-HVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLA-SVRNFASEYNIQHHQ   79 (251)
Q Consensus         2 ~vlItG~s~gIG~a~a~~l~~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~-~i~~~~~~~~~~~g~   79 (251)
                      +|+|.|+ +|+|...+..++..|. +|+.+++++++++.+.+ +     +.... +  |..+.+ ..++..+...  .+.
T Consensus        31 ~VlI~G~-Gg~g~~~~~~~~~~g~~~Vi~~~~~~~rl~~a~~-~-----GAd~~-i--n~~~~~~~~~~~~~~~~--~~G   98 (175)
T d1cdoa2          31 TCAVFGL-GAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAKV-F-----GATDF-V--NPNDHSEPISQVLSKMT--NGG   98 (175)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHH-T-----TCCEE-E--CGGGCSSCHHHHHHHHH--TSC
T ss_pred             EEEEEec-CCccchHHHHHHHHhhchheeecchHHHHHHHHH-c-----CCcEE-E--cCCCcchhHHHHHHhhc--cCC
Confidence            6889975 6788888887887776 78999999888665443 2     43332 2  332221 1233333322  247


Q ss_pred             eeEEEEcCCC
Q 025509           80 LNILINNAGI   89 (251)
Q Consensus        80 id~lv~~ag~   89 (251)
                      +|+++.+.|.
T Consensus        99 ~d~vid~~G~  108 (175)
T d1cdoa2          99 VDFSLECVGN  108 (175)
T ss_dssp             BSEEEECSCC
T ss_pred             cceeeeecCC
Confidence            9999999983

>d2g5ca2 c.2.1.6 (A:30-200) Prephenate dehydrogenase TyrA {Aquifex aeolicus [TaxId: 63363]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Aquifex aeolicus [TaxId: 63363]

Probab=95.82  E-value=0.045  Score=39.48  Aligned_cols=84  Identities=14%  Similarity=0.122  Sum_probs=53.3

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCC--EEEEEecCchhHHHHHHHHH---------h-hCCCCceEEEEecCCCHHHHHH
Q 025509            1 MDIVITGATSGIGTETARVLALRGV--HVVMGVRDIAAGKDVKETIV---------K-EIPSAKVDAMELDLSSLASVRN   68 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~--~Vi~~~r~~~~~~~~~~~~~---------~-~~~~~~v~~~~~D~~~~~~i~~   68 (251)
                      |+|+|.|. |-||.++|+.|.+.|+  +|+..+++++..+.+.+.-.         + .....++.++.   .-++++.+
T Consensus         2 k~I~IIG~-G~mG~sla~~L~~~g~~~~I~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~dlIila---~p~~~~~~   77 (171)
T d2g5ca2           2 QNVLIVGV-GFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVDLGIIDEGTTSIAKVEDFSPDFVMLS---SPVRTFRE   77 (171)
T ss_dssp             CEEEEESC-SHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHTTSCSEEESCGGGGGGTCCSEEEEC---SCHHHHHH
T ss_pred             CEEEEEcc-CHHHHHHHHHHHhcCCCeEEEEEECChHHHHHHHHhhcchhhhhhhhhhhcccccccccc---CCchhhhh
Confidence            56899975 8999999999999996  68888998877666544210         0 00011222222   23566777


Q ss_pred             HHHHHHhcCCCeeEEEEcCC
Q 025509           69 FASEYNIQHHQLNILINNAG   88 (251)
Q Consensus        69 ~~~~~~~~~g~id~lv~~ag   88 (251)
                      +++++......=.+++..++
T Consensus        78 vl~~l~~~~~~~~ii~d~~s   97 (171)
T d2g5ca2          78 IAKKLSYILSEDATVTDQGS   97 (171)
T ss_dssp             HHHHHHHHSCTTCEEEECCS
T ss_pred             hhhhhhcccccccccccccc
Confidence            77777665544445555554

>d1pjca1 c.2.1.4 (A:136-303) L-alanine dehydrogenase {Phormidium lapideum [TaxId: 32060]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: L-alanine dehydrogenase
species: Phormidium lapideum [TaxId: 32060]

Probab=95.75  E-value=0.052  Score=39.37  Aligned_cols=74  Identities=20%  Similarity=0.300  Sum_probs=54.4

Q ss_pred             EEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCee
Q 025509            2 DIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQLN   81 (251)
Q Consensus         2 ~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~id   81 (251)
                      +|+|.|+ |-.|.+.++.....|+.|.+.+.+.++++++....     ...+.+.   .++.+.+++.++       ..|
T Consensus        34 ~V~ViGa-GvaG~~A~~~A~~lGA~V~~~D~~~~~l~~l~~~~-----~~~~~~~---~~~~~~l~~~~~-------~aD   97 (168)
T d1pjca1          34 KVVILGG-GVVGTEAAKMAVGLGAQVQIFDINVERLSYLETLF-----GSRVELL---YSNSAEIETAVA-------EAD   97 (168)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH-----GGGSEEE---ECCHHHHHHHHH-------TCS
T ss_pred             EEEEECC-ChHHHHHHHHHhhCCCEEEEEeCcHHHHHHHHHhh-----cccceee---hhhhhhHHHhhc-------cCc
Confidence            4788875 57889999999999999999999988887766554     2334433   455666665444       579


Q ss_pred             EEEEcCCCCC
Q 025509           82 ILINNAGIMG   91 (251)
Q Consensus        82 ~lv~~ag~~~   91 (251)
                      +||.++-+..
T Consensus        98 ivI~aalipG  107 (168)
T d1pjca1          98 LLIGAVLVPG  107 (168)
T ss_dssp             EEEECCCCTT
T ss_pred             EEEEeeecCC
Confidence            9999997653

>d1yl7a1 c.2.1.3 (A:2-105,A:215-245) Dihydrodipicolinate reductase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=95.75  E-value=0.039  Score=38.67  Aligned_cols=76  Identities=11%  Similarity=0.118  Sum_probs=52.9

Q ss_pred             EEEEECCCChhHHHHHHHHHHc-CCEEEE-EecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCC
Q 025509            2 DIVITGATSGIGTETARVLALR-GVHVVM-GVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQ   79 (251)
Q Consensus         2 ~vlItG~s~gIG~a~a~~l~~~-G~~Vi~-~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~   79 (251)
                      +|.|.|++|-+|+++++...+. ++.++. +++.. .+...    ..    .... +..|+|.++.....++...+.  +
T Consensus         1 kI~v~Ga~GrMG~~i~~~i~~~~~~~l~~~~d~~~-~~~~~----~~----~~~D-vvIDFS~p~~~~~~~~~~~~~--~   68 (135)
T d1yl7a1           1 RVGVLGAKGKVGATMVRAVAAADDLTLSAELDAGD-PLSLL----TD----GNTE-VVIDFTHPDVVMGNLEFLIDN--G   68 (135)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHSTTSEEEEEECTTC-CTHHH----HT----TTCS-EEEECCCTTTHHHHHHHHHHT--T
T ss_pred             CEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCC-chhhh----cc----ccCC-EEEEcccHHHHHHHHHHHHhc--C
Confidence            5899999999999999998764 567653 44432 22211    11    1233 447999999999999887654  5


Q ss_pred             eeEEEEcCCC
Q 025509           80 LNILINNAGI   89 (251)
Q Consensus        80 id~lv~~ag~   89 (251)
                      +-+|+-..|+
T Consensus        69 ~~~ViGTTG~   78 (135)
T d1yl7a1          69 IHAVVGTTGF   78 (135)
T ss_dssp             CEEEECCCCC
T ss_pred             CCEEEecccc
Confidence            6688888875

>d2fy8a1 c.2.1.9 (A:116-244) Potassium channel-related protein MthK {Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Potassium channel-related protein MthK
species: Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]

Probab=95.72  E-value=0.0092  Score=41.43  Aligned_cols=70  Identities=21%  Similarity=0.186  Sum_probs=50.5

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      |.++|.|. +.+|..+++.|.  |.+|+++..+++..+....        ..+.++..|.++++.++++      .....
T Consensus         1 kHivI~G~-g~~g~~l~~~L~--~~~i~vi~~d~~~~~~~~~--------~~~~~i~Gd~~~~~~L~~a------~i~~A   63 (129)
T d2fy8a1           1 RHVVICGW-SESTLECLRELR--GSEVFVLAEDENVRKKVLR--------SGANFVHGDPTRVSDLEKA------NVRGA   63 (129)
T ss_dssp             CCEEEESC-CHHHHHHHHTSC--GGGEEEEESCTTHHHHHHH--------TTCEEEESCTTSHHHHHHT------TCTTC
T ss_pred             CEEEEECC-CHHHHHHHHHHc--CCCCEEEEcchHHHHHHHh--------cCccccccccCCHHHHHHh------hhhcC
Confidence            56888875 778999999984  5678888888877654432        3578889999998777641      22356


Q ss_pred             eEEEEcC
Q 025509           81 NILINNA   87 (251)
Q Consensus        81 d~lv~~a   87 (251)
                      +.+|...
T Consensus        64 ~~vi~~~   70 (129)
T d2fy8a1          64 RAVIVNL   70 (129)
T ss_dssp             SEEEECC
T ss_pred             cEEEEec
Confidence            7777655

>d2b78a2 c.66.1.51 (A:69-385) Hypothetical protein SMu776, middle and C-terminal domains {Streptococcus mutans [TaxId: 1309]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Hypothetical protein SMu776, middle and C-terminal domains
species: Streptococcus mutans [TaxId: 1309]

Probab=95.62  E-value=0.31  Score=38.88  Aligned_cols=79  Identities=10%  Similarity=0.027  Sum_probs=52.4

Q ss_pred             EEEEECC-CChhHHHHHHHHHHcCC-EEEEEecCchhHHHHHHHHHhhCC-CCceEEEEecCCCHHHHHHHHHHHHhcCC
Q 025509            2 DIVITGA-TSGIGTETARVLALRGV-HVVMGVRDIAAGKDVKETIVKEIP-SAKVDAMELDLSSLASVRNFASEYNIQHH   78 (251)
Q Consensus         2 ~vlItG~-s~gIG~a~a~~l~~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~-~~~v~~~~~D~~~~~~i~~~~~~~~~~~g   78 (251)
                      +||=..+ +||.+.+    .+..|+ .|+.++.++..++...+.+....- ..++.++..|+-      ..++....+..
T Consensus       147 ~VLdlf~~~G~~sl~----aa~~ga~~V~~vD~s~~a~~~a~~N~~~n~l~~~~~~~i~~d~~------~~l~~~~~~~~  216 (317)
T d2b78a2         147 TVLNLFSYTAAFSVA----AAMGGAMATTSVDLAKRSRALSLAHFEANHLDMANHQLVVMDVF------DYFKYARRHHL  216 (317)
T ss_dssp             EEEEETCTTTHHHHH----HHHTTBSEEEEEESCTTHHHHHHHHHHHTTCCCTTEEEEESCHH------HHHHHHHHTTC
T ss_pred             ceeecCCCCcHHHHH----HHhCCCceEEEecCCHHHHHHHHHHHHHhcccCcceEEEEccHH------HHHHHHHhhcC
Confidence            4444444 4555543    345677 799999999888888888765432 356889998882      33334444456


Q ss_pred             CeeEEEEcCCCC
Q 025509           79 QLNILINNAGIM   90 (251)
Q Consensus        79 ~id~lv~~ag~~   90 (251)
                      ++|+||.....+
T Consensus       217 ~fD~Ii~DPP~f  228 (317)
T d2b78a2         217 TYDIIIIDPPSF  228 (317)
T ss_dssp             CEEEEEECCCCC
T ss_pred             CCCEEEEcChhh
Confidence            899999997643

>d2as0a2 c.66.1.51 (A:73-396) Hypothetical protein PH1915, middle and C-terminal domains {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Hypothetical protein PH1915, middle and C-terminal domains
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=95.43  E-value=0.2  Score=40.13  Aligned_cols=115  Identities=11%  Similarity=0.100  Sum_probs=67.8

Q ss_pred             EEEEECCC-ChhHHHHHHHHHHcCC-EEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCC
Q 025509            2 DIVITGAT-SGIGTETARVLALRGV-HVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQ   79 (251)
Q Consensus         2 ~vlItG~s-~gIG~a~a~~l~~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~   79 (251)
                      +||=.++. |+++.++    +..|+ +|+.++.++..++.+.+.+....-..++.++..|+.      +....+.....+
T Consensus       148 ~VLDl~~g~G~~si~~----a~~ga~~V~~vD~s~~al~~a~~N~~~ngl~~~~~~~~~d~~------~~~~~~~~~~~~  217 (324)
T d2as0a2         148 RVLDVFTYTGGFAIHA----AIAGADEVIGIDKSPRAIETAKENAKLNGVEDRMKFIVGSAF------EEMEKLQKKGEK  217 (324)
T ss_dssp             EEEETTCTTTHHHHHH----HHTTCSEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHH------HHHHHHHHTTCC
T ss_pred             eeecccCcccchhhhh----hhcCCcEEEeecCCHHHHHHHHHHHHHcCCCccceeeechhh------hhhHHHHhccCC
Confidence            34444444 5555443    45676 899999999988888887776543456788887773      222333334468


Q ss_pred             eeEEEEcCCCCCCCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcC
Q 025509           80 LNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSS  141 (251)
Q Consensus        80 id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS  141 (251)
                      +|+||.+...+..    +..+.....+    ....+++.+++.++       ++|.+++.|.
T Consensus       218 fD~Vi~DpP~~~~----~~~~~~~~~~----~y~~l~~~a~~ll~-------pGG~lv~~s~  264 (324)
T d2as0a2         218 FDIVVLDPPAFVQ----HEKDLKAGLR----AYFNVNFAGLNLVK-------DGGILVTCSC  264 (324)
T ss_dssp             EEEEEECCCCSCS----SGGGHHHHHH----HHHHHHHHHHTTEE-------EEEEEEEEEC
T ss_pred             CCchhcCCccccC----CHHHHHHHHH----HHHHHHHHHHHHcC-------CCcEEEEEeC
Confidence            9999998764322    2222222221    22334445555543       4677777664

>d1yqga2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Neisseria meningitidis, serogroup B [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Pyrroline-5-carboxylate reductase ProC
species: Neisseria meningitidis, serogroup B [TaxId: 487]

Probab=95.39  E-value=0.016  Score=41.39  Aligned_cols=42  Identities=14%  Similarity=0.302  Sum_probs=34.9

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcC-CEEEEEecCchhHHHHHHH
Q 025509            1 MDIVITGATSGIGTETARVLALRG-VHVVMGVRDIAAGKDVKET   43 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G-~~Vi~~~r~~~~~~~~~~~   43 (251)
                      |++.+.|+ |-+|.++++.|.+.| ++|.+.+|++++.+...++
T Consensus         1 MkI~fIG~-G~MG~ai~~~l~~~~~~~i~v~~r~~~~~~~l~~~   43 (152)
T d1yqga2           1 MNVYFLGG-GNMAAAVAGGLVKQGGYRIYIANRGAEKRERLEKE   43 (152)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHCSCEEEEECSSHHHHHHHHHH
T ss_pred             CEEEEEcC-cHHHHHHHHHHHHCCCCcEEEEeCChhHHHHhhhh
Confidence            56788876 899999999998887 7999999998877666543

>d2jfga1 c.5.1.1 (A:1-93) UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD
species: Escherichia coli [TaxId: 562]

Probab=95.30  E-value=0.009  Score=39.05  Aligned_cols=34  Identities=21%  Similarity=0.241  Sum_probs=29.5

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCch
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIA   35 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~   35 (251)
                      |+|+|.|. |.-|.++|+.|.++|++|++.+.+..
T Consensus         6 K~v~ViGl-G~sG~s~a~~L~~~g~~v~~~D~~~~   39 (93)
T d2jfga1           6 KNVVIIGL-GLTGLSCVDFFLARGVTPRVMDTRMT   39 (93)
T ss_dssp             CCEEEECC-SHHHHHHHHHHHHTTCCCEEEESSSS
T ss_pred             CEEEEEeE-CHHHHHHHHHHHHCCCEEEEeeCCcC
Confidence            57899987 66799999999999999999998654

>d1c1da1 c.2.1.7 (A:149-349) Phenylalanine dehydrogenase {Rhodococcus sp., M4 [TaxId: 1831]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Phenylalanine dehydrogenase
species: Rhodococcus sp., M4 [TaxId: 1831]

Probab=95.22  E-value=0.0043  Score=46.96  Aligned_cols=39  Identities=15%  Similarity=0.319  Sum_probs=32.9

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHH
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDV   40 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~   40 (251)
                      |+|+|-| -|.+|.++|+.|.+.|++|++.+.+.......
T Consensus        28 k~v~IqG-~G~VG~~~A~~L~~~Gakvvv~d~d~~~~~~~   66 (201)
T d1c1da1          28 LTVLVQG-LGAVGGSLASLAAEAGAQLLVADTDTERVAHA   66 (201)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHH
T ss_pred             CEEEEEC-CCHHHHHHHHHHHHCCCEEEEecchHHHHHHH
Confidence            5788886 77899999999999999999999887665543

>d1ve3a1 c.66.1.43 (A:2-227) Hypothetical protein PH0226 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: CAC2371-like
domain: Hypothetical protein PH0226
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=95.17  E-value=0.085  Score=39.31  Aligned_cols=72  Identities=14%  Similarity=0.070  Sum_probs=54.1

Q ss_pred             EEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCee
Q 025509            2 DIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQLN   81 (251)
Q Consensus         2 ~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~id   81 (251)
                      +||=.|+++|.   ++..|++.|++|+.++.++.-++.+.+...+.  +..+.++..|..+..          ...+.+|
T Consensus        40 ~ILDiGcG~G~---~~~~la~~~~~v~giD~S~~~i~~ak~~~~~~--~~~~~~~~~d~~~l~----------~~~~~fD  104 (226)
T d1ve3a1          40 KVLDLACGVGG---FSFLLEDYGFEVVGVDISEDMIRKAREYAKSR--ESNVEFIVGDARKLS----------FEDKTFD  104 (226)
T ss_dssp             EEEEETCTTSH---HHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT--TCCCEEEECCTTSCC----------SCTTCEE
T ss_pred             EEEEECCCcch---hhhhHhhhhcccccccccccchhhhhhhhccc--ccccccccccccccc----------ccCcCce
Confidence            58889999887   66788889999999999988877777766554  345677778876532          1224799


Q ss_pred             EEEEcCC
Q 025509           82 ILINNAG   88 (251)
Q Consensus        82 ~lv~~ag   88 (251)
                      +|+.+..
T Consensus       105 ~I~~~~~  111 (226)
T d1ve3a1         105 YVIFIDS  111 (226)
T ss_dssp             EEEEESC
T ss_pred             EEEEecc
Confidence            9998765

>d1wzna1 c.66.1.43 (A:1-251) Hypothetical methyltransferase PH1305 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: CAC2371-like
domain: Hypothetical methyltransferase PH1305
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=95.12  E-value=0.051  Score=41.58  Aligned_cols=72  Identities=14%  Similarity=0.081  Sum_probs=53.6

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      ++||=.|+++|   .++..|+++|++|+.++.++.-++.+.+...+.  +.++.++..|+.+..           -.+.+
T Consensus        43 ~~iLDiGcGtG---~~~~~l~~~~~~v~gvD~s~~mi~~a~~~~~~~--~~~i~~~~~d~~~l~-----------~~~~f  106 (251)
T d1wzna1          43 RRVLDLACGTG---IPTLELAERGYEVVGLDLHEEMLRVARRKAKER--NLKIEFLQGDVLEIA-----------FKNEF  106 (251)
T ss_dssp             CEEEEETCTTC---HHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT--TCCCEEEESCGGGCC-----------CCSCE
T ss_pred             CEEEEeCCCCC---ccchhhcccceEEEEEeeccccccccccccccc--cccchheehhhhhcc-----------ccccc
Confidence            36888899887   456678899999999999987777777766554  447899999986532           11379


Q ss_pred             eEEEEcCC
Q 025509           81 NILINNAG   88 (251)
Q Consensus        81 d~lv~~ag   88 (251)
                      |.|++.-+
T Consensus       107 D~I~~~~~  114 (251)
T d1wzna1         107 DAVTMFFS  114 (251)
T ss_dssp             EEEEECSS
T ss_pred             chHhhhhh
Confidence            98887643

>d3cuma2 c.2.1.6 (A:1-162) Hydroxyisobutyrate dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=95.03  E-value=0.1  Score=37.36  Aligned_cols=69  Identities=13%  Similarity=0.023  Sum_probs=46.8

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHH-------HhhCCCCceEEEEecCCCHHHHHHHHHH
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETI-------VKEIPSAKVDAMELDLSSLASVRNFASE   72 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~-------~~~~~~~~v~~~~~D~~~~~~i~~~~~~   72 (251)
                      ++|-+. |.|-+|.++|+.|+++|++|.+.+|+.++.+.+...-       .+..  ....++..-+.+.+.++.++..
T Consensus         2 ~kIg~I-GlG~MG~~iA~~L~~~g~~v~~~d~~~~~~~~~~~~~~~~~~~~~e~~--~~~diii~~v~~~~~~~~v~~~   77 (162)
T d3cuma2           2 KQIAFI-GLGHMGAPMATNLLKAGYLLNVFDLVQSAVDGLVAAGASAARSARDAV--QGADVVISMLPASQHVEGLYLD   77 (162)
T ss_dssp             CEEEEE-CCSTTHHHHHHHHHHTTCEEEEECSSHHHHHHHHHTTCEECSSHHHHH--TSCSEEEECCSCHHHHHHHHHS
T ss_pred             CEEEEE-EEHHHHHHHHHHHHHCCCeEEEEECchhhhhhhhhhhccccchhhhhc--cccCeeeecccchhhHHHHHhc
Confidence            356666 4689999999999999999999999988766654321       1111  1234444456667777766543

>d1pjza_ c.66.1.36 (A:) Thiopurine S-methyltransferase {Pseudomonas syringae [TaxId: 317]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Thiopurine S-methyltransferase
domain: Thiopurine S-methyltransferase
species: Pseudomonas syringae [TaxId: 317]

Probab=94.98  E-value=0.051  Score=39.59  Aligned_cols=76  Identities=13%  Similarity=0.051  Sum_probs=52.6

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhC-----------CCCceEEEEecCCCHHHHHHH
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEI-----------PSAKVDAMELDLSSLASVRNF   69 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~-----------~~~~v~~~~~D~~~~~~i~~~   69 (251)
                      ++||..|++.|   ..+..|+++|++|+.++.++.-++.+.+...+..           .+..+.++..|+.+...... 
T Consensus        22 ~rvLd~GCG~G---~~a~~la~~G~~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~-   97 (201)
T d1pjza_          22 ARVLVPLCGKS---QDMSWLSGQGYHVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIEIWCGDFFALTARDI-   97 (201)
T ss_dssp             CEEEETTTCCS---HHHHHHHHHCCEEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEEEECCSSSTHHHH-
T ss_pred             CEEEEecCcCC---HHHHHHHHcCCceEeecccHHHHHHHHHHhccccchhhhhhhhhccccccceecccccccccccc-
Confidence            37999999988   3777999999999999999888777766553211           02345678888876433221 


Q ss_pred             HHHHHhcCCCeeEEEEcCC
Q 025509           70 ASEYNIQHHQLNILINNAG   88 (251)
Q Consensus        70 ~~~~~~~~g~id~lv~~ag   88 (251)
                              ..+|.++....
T Consensus        98 --------~~~D~i~~~~~  108 (201)
T d1pjza_          98 --------GHCAAFYDRAA  108 (201)
T ss_dssp             --------HSEEEEEEESC
T ss_pred             --------cceeEEEEEee
Confidence                    26787776554

>d1txga2 c.2.1.6 (A:1-180) Glycerol-3- phosphate dehydrogenase {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Glycerol-3- phosphate dehydrogenase
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=94.94  E-value=0.059  Score=39.49  Aligned_cols=34  Identities=24%  Similarity=0.264  Sum_probs=29.6

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCch
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIA   35 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~   35 (251)
                      |.|.|.|+ |..|.++|..|++.|++|.+.+|..+
T Consensus         1 MkI~ViGa-G~~GtalA~~la~~g~~V~l~~r~~~   34 (180)
T d1txga2           1 MIVSILGA-GAMGSALSVPLVDNGNEVRIWGTEFD   34 (180)
T ss_dssp             CEEEEESC-CHHHHHHHHHHHHHCCEEEEECCGGG
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCCEEEEEEeccc
Confidence            57888876 79999999999999999999998543

>d1pjqa1 c.2.1.11 (A:1-113) Siroheme synthase CysG, domain 1 {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Siroheme synthase N-terminal domain-like
domain: Siroheme synthase CysG, domain 1
species: Salmonella typhimurium [TaxId: 90371]

Probab=94.59  E-value=0.048  Score=36.68  Aligned_cols=34  Identities=21%  Similarity=0.348  Sum_probs=29.2

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCch
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIA   35 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~   35 (251)
                      |+|||.|++ .+|.+-++.|++.|++|++++....
T Consensus        13 k~vlVvG~G-~va~~ka~~ll~~ga~v~v~~~~~~   46 (113)
T d1pjqa1          13 RDCLIVGGG-DVAERKARLLLEAGARLTVNALTFI   46 (113)
T ss_dssp             CEEEEECCS-HHHHHHHHHHHHTTBEEEEEESSCC
T ss_pred             CEEEEECCC-HHHHHHHHHHHHCCCeEEEEeccCC
Confidence            579999876 5999999999999999999887543

>d1ebda2 c.3.1.5 (A:155-271) Dihydrolipoamide dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=94.42  E-value=0.038  Score=37.39  Aligned_cols=34  Identities=24%  Similarity=0.194  Sum_probs=29.1

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCch
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIA   35 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~   35 (251)
                      |+++|.| +|.+|..+|..|++.|.+|.++.|.+.
T Consensus        23 ~~v~IiG-gG~ig~E~A~~l~~~G~~Vtlve~~~~   56 (117)
T d1ebda2          23 KSLVVIG-GGYIGIELGTAYANFGTKVTILEGAGE   56 (117)
T ss_dssp             SEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred             CeEEEEC-CCccceeeeeeecccccEEEEEEecce
Confidence            4677776 479999999999999999999998754

>d1y8ca_ c.66.1.43 (A:) Putative methyltransferase CAC2371 {Clostridium acetobutylicum [TaxId: 1488]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: CAC2371-like
domain: Putative methyltransferase CAC2371
species: Clostridium acetobutylicum [TaxId: 1488]

Probab=94.37  E-value=0.07  Score=40.78  Aligned_cols=72  Identities=10%  Similarity=0.009  Sum_probs=54.5

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      ++||=.|++.|.   ++..|+++|.+|+.++.++.-++.+.+.....  +.++.++..|+.+.+           ..+++
T Consensus        39 ~~vLDiGCG~G~---~~~~l~~~g~~v~GvD~S~~ml~~A~~~~~~~--~~~v~~~~~d~~~~~-----------~~~~f  102 (246)
T d1y8ca_          39 DDYLDLACGTGN---LTENLCPKFKNTWAVDLSQEMLSEAENKFRSQ--GLKPRLACQDISNLN-----------INRKF  102 (246)
T ss_dssp             TEEEEETCTTST---THHHHGGGSSEEEEECSCHHHHHHHHHHHHHT--TCCCEEECCCGGGCC-----------CSCCE
T ss_pred             CeEEEEeCcCCH---HHHHHHHhCCccEeeccchhhhhhcccccccc--Cccceeeccchhhhc-----------ccccc
Confidence            368889999885   78889999999999999988777776665544  456889988886531           12479


Q ss_pred             eEEEEcCC
Q 025509           81 NILINNAG   88 (251)
Q Consensus        81 d~lv~~ag   88 (251)
                      |++++..+
T Consensus       103 D~i~~~~~  110 (246)
T d1y8ca_         103 DLITCCLD  110 (246)
T ss_dssp             EEEEECTT
T ss_pred             cccceeee
Confidence            99987544

>d1mv8a2 c.2.1.6 (A:1-202) GDP-mannose 6-dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: GDP-mannose 6-dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=94.36  E-value=0.034  Score=41.64  Aligned_cols=39  Identities=23%  Similarity=0.140  Sum_probs=33.3

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHH
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDV   40 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~   40 (251)
                      |+|.|. |.|.+|..+|..|+++|++|++.+.++++.+.+
T Consensus         1 MkI~Vi-GlG~vGl~~a~~la~~g~~V~g~D~n~~~i~~l   39 (202)
T d1mv8a2           1 MRISIF-GLGYVGAVCAGCLSARGHEVIGVDVSSTKIDLI   39 (202)
T ss_dssp             CEEEEE-CCSTTHHHHHHHHHHTTCEEEEECSCHHHHHHH
T ss_pred             CEEEEE-CCCHhHHHHHHHHHhCCCcEEEEeCCHHHHHHh
Confidence            567777 678999999999999999999999987765554

>d3grsa2 c.3.1.5 (A:166-290) Glutathione reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.30  E-value=0.032  Score=38.38  Aligned_cols=33  Identities=30%  Similarity=0.287  Sum_probs=29.0

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCc
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDI   34 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~   34 (251)
                      |+++|.||+ .||.++|..|++.|.+|.++.|++
T Consensus        23 k~vvIvGgG-~iG~E~A~~l~~~G~~Vtlv~~~~   55 (125)
T d3grsa2          23 GRSVIVGAG-YIAVEMAGILSALGSKTSLMIRHD   55 (125)
T ss_dssp             SEEEEECCS-HHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             CEEEEEcCC-ccHHHHHHHHhcCCcEEEEEeecc
Confidence            568888764 799999999999999999999974

>d1n1ea2 c.2.1.6 (A:9-197) Glycerol-3- phosphate dehydrogenase {Trypanosome (Leishmania mexicana) [TaxId: 5665]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Glycerol-3- phosphate dehydrogenase
species: Trypanosome (Leishmania mexicana) [TaxId: 5665]

Probab=94.24  E-value=0.019  Score=42.77  Aligned_cols=40  Identities=25%  Similarity=0.232  Sum_probs=32.8

Q ss_pred             EEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHH
Q 025509            2 DIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKE   42 (251)
Q Consensus         2 ~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~   42 (251)
                      +|.|.|+ |..|.|+|..|++.|++|.+.+|+++..+.+.+
T Consensus         9 KI~ViGa-G~wGtAlA~~La~~g~~V~l~~r~~~~~~~i~~   48 (189)
T d1n1ea2           9 KAVVFGS-GAFGTALAMVLSKKCREVCVWHMNEEEVRLVNE   48 (189)
T ss_dssp             EEEEECC-SHHHHHHHHHHHTTEEEEEEECSCHHHHHHHHH
T ss_pred             eEEEECC-CHHHHHHHHHHHHcCCeEEEEEecHHHHHHHhh
Confidence            4778875 569999999999999999999998776655443

>d1p9oa_ c.72.3.1 (A:) Phosphopantothenoylcysteine synthetase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Ribokinase-like
superfamily: CoaB-like
family: CoaB-like
domain: Phosphopantothenoylcysteine synthetase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.18  E-value=0.088  Score=41.74  Aligned_cols=26  Identities=19%  Similarity=0.257  Sum_probs=22.6

Q ss_pred             CCChhHHHHHHHHHHcCCEEEEEecC
Q 025509            8 ATSGIGTETARVLALRGVHVVMGVRD   33 (251)
Q Consensus         8 ~s~gIG~a~a~~l~~~G~~Vi~~~r~   33 (251)
                      +||-.|.++|++|..+|+.|+++.+.
T Consensus        44 SSGk~G~alA~~~~~~Ga~V~li~g~   69 (290)
T d1p9oa_          44 SSGRRGATSAEAFLAAGYGVLFLYRA   69 (290)
T ss_dssp             CCCHHHHHHHHHHHHTTCEEEEEEET
T ss_pred             CchHHHHHHHHHHHHcCCEEEEEecC
Confidence            45789999999999999999988653

>d1pgja2 c.2.1.6 (A:1-178) 6-phosphogluconate dehydrogenase {Trypanosoma brucei [TaxId: 5691]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: 6-phosphogluconate dehydrogenase
species: Trypanosoma brucei [TaxId: 5691]

Probab=94.04  E-value=0.03  Score=40.88  Aligned_cols=40  Identities=15%  Similarity=0.219  Sum_probs=34.0

Q ss_pred             EEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHH
Q 025509            3 IVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKET   43 (251)
Q Consensus         3 vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~   43 (251)
                      |-|. |.|-+|.++|+.|+++|++|.+.+|++++.+++.++
T Consensus         4 IGvI-GlG~MG~~ma~~L~~~G~~V~~~dr~~~~~~~l~~~   43 (178)
T d1pgja2           4 VGVV-GLGVMGANLALNIAEKGFKVAVFNRTYSKSEEFMKA   43 (178)
T ss_dssp             EEEE-CCSHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHH
T ss_pred             EEEE-eehHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHc
Confidence            4445 578999999999999999999999999888777654

>d2ahra2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Pyrroline-5-carboxylate reductase ProC
species: Streptococcus pyogenes [TaxId: 1314]

Probab=94.02  E-value=0.053  Score=38.60  Aligned_cols=43  Identities=14%  Similarity=0.251  Sum_probs=35.4

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHH
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETI   44 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~   44 (251)
                      |++.|. |.|-+|.++++.|.+.|++|++..|+.++.++..++.
T Consensus         1 MkIg~I-G~G~mG~al~~~l~~~~~~i~v~~r~~~~~~~l~~~~   43 (152)
T d2ahra2           1 MKIGII-GVGKMASAIIKGLKQTPHELIISGSSLERSKEIAEQL   43 (152)
T ss_dssp             CEEEEE-CCSHHHHHHHHHHTTSSCEEEEECSSHHHHHHHHHHH
T ss_pred             CEEEEE-eccHHHHHHHHHHHhCCCeEEEEcChHHhHHhhcccc
Confidence            456667 5689999999999999999999999988877765544

>d2fyta1 c.66.1.6 (A:238-548) Protein arginine N-methyltransferase 3, PRMT3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Arginine methyltransferase
domain: Protein arginine N-methyltransferase 3, PRMT3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.91  E-value=0.31  Score=38.55  Aligned_cols=73  Identities=11%  Similarity=0.116  Sum_probs=51.7

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCC-EEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCC
Q 025509            1 MDIVITGATSGIGTETARVLALRGV-HVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQ   79 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~   79 (251)
                      |+||-.|++.|+   ++..+++.|+ +|+.++.++. ...+.+...+.....++.++..|+.+..          ....+
T Consensus        37 ~~VLDiGcG~G~---lsl~aa~~Ga~~V~aid~s~~-~~~a~~~~~~~~~~~~i~~~~~~~~~l~----------~~~~~  102 (311)
T d2fyta1          37 KVVLDVGCGTGI---LSMFAAKAGAKKVLGVDQSEI-LYQAMDIIRLNKLEDTITLIKGKIEEVH----------LPVEK  102 (311)
T ss_dssp             CEEEEETCTTSH---HHHHHHHTTCSEEEEEESSTH-HHHHHHHHHHTTCTTTEEEEESCTTTSC----------CSCSC
T ss_pred             CEEEEECCCCCH---HHHHHHHcCCCEEEEEeCHHH-HHHHHHHHHHhCCCccceEEEeeHHHhc----------Ccccc
Confidence            579999999886   5666778887 7999998864 4445555555444567999999987642          12247


Q ss_pred             eeEEEEcC
Q 025509           80 LNILINNA   87 (251)
Q Consensus        80 id~lv~~a   87 (251)
                      +|+|+...
T Consensus       103 ~D~Ivse~  110 (311)
T d2fyta1         103 VDVIISEW  110 (311)
T ss_dssp             EEEEEECC
T ss_pred             ceEEEEee
Confidence            99998754

>d1kjqa2 c.30.1.1 (A:2-112) Glycinamide ribonucleotide transformylase PurT, N-domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Glycinamide ribonucleotide transformylase PurT, N-domain
species: Escherichia coli [TaxId: 562]

Probab=93.87  E-value=0.17  Score=33.88  Aligned_cols=68  Identities=15%  Similarity=0.154  Sum_probs=51.2

Q ss_pred             EEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCee
Q 025509            2 DIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQLN   81 (251)
Q Consensus         2 ~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~id   81 (251)
                      +|.|.| +|=+|+-++.+..+.|+++++.+.+++.-..          ...-.++..|..|.+.+.++....     .+|
T Consensus        13 kigIlG-gGQL~rMla~aA~~lG~~v~v~d~~~~~PA~----------~va~~~i~~~~~d~~~l~~~~~~~-----~~D   76 (111)
T d1kjqa2          13 RVMLLG-SGELGKEVAIECQRLGVEVIAVDRYADAPAM----------HVAHRSHVINMLDGDALRRVVELE-----KPH   76 (111)
T ss_dssp             EEEEES-CSHHHHHHHHHHHTTTCEEEEEESSTTCGGG----------GGSSEEEECCTTCHHHHHHHHHHH-----CCS
T ss_pred             EEEEEe-CCHHHHHHHHHHHHCCCEEEEEcCCCCCchh----------hcCCeEEECCCCCHHHHHHHHHhh-----CCc
Confidence            578888 5689999999988999999999987653110          112356778999999999887764     678


Q ss_pred             EEEE
Q 025509           82 ILIN   85 (251)
Q Consensus        82 ~lv~   85 (251)
                      ++-.
T Consensus        77 viT~   80 (111)
T d1kjqa2          77 YIVP   80 (111)
T ss_dssp             EEEE
T ss_pred             eEEE
Confidence            8744

>d1xhca2 c.3.1.5 (A:104-225) NADH oxidase /nitrite reductase {Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH oxidase /nitrite reductase
species: Pyrococcus furiosus [TaxId: 2261]

Probab=93.74  E-value=0.05  Score=37.11  Aligned_cols=33  Identities=36%  Similarity=0.334  Sum_probs=27.9

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCc
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDI   34 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~   34 (251)
                      |+++|.| +|.+|.++|..|++.|.+|.++.|++
T Consensus        33 ~~vvIiG-gG~iG~E~A~~l~~~g~~Vtlv~~~~   65 (122)
T d1xhca2          33 GEAIIIG-GGFIGLELAGNLAEAGYHVKLIHRGA   65 (122)
T ss_dssp             SEEEEEE-CSHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             CcEEEEC-CcHHHHHHHHHhhcccceEEEEeccc
Confidence            3566665 57999999999999999999998875

>d1nv8a_ c.66.1.30 (A:) N5-glutamine methyltransferase, HemK {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: N5-glutamine methyltransferase, HemK
domain: N5-glutamine methyltransferase, HemK
species: Thermotoga maritima [TaxId: 2336]

Probab=93.67  E-value=0.28  Score=38.30  Aligned_cols=77  Identities=13%  Similarity=0.137  Sum_probs=52.3

Q ss_pred             EEEEECCCCh-hHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            2 DIVITGATSG-IGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         2 ~vlItG~s~g-IG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      +++-.|+++| |+.+++ +  ...++|+.++.++..++-+.+..+...-...+.+...|+.+.         ..+..+++
T Consensus       113 ~vld~g~GsG~i~~~la-~--~~~~~v~a~Dis~~Al~~A~~Na~~~~~~~~~~i~~~~~~~~---------~~~~~~~f  180 (271)
T d1nv8a_         113 TVADIGTGSGAIGVSVA-K--FSDAIVFATDVSSKAVEIARKNAERHGVSDRFFVRKGEFLEP---------FKEKFASI  180 (271)
T ss_dssp             EEEEESCTTSHHHHHHH-H--HSSCEEEEEESCHHHHHHHHHHHHHTTCTTSEEEEESSTTGG---------GGGGTTTC
T ss_pred             EEEEeeeeeehhhhhhh-h--cccceeeechhhhhHHHHHHHHHHHcCCCceeEEeecccccc---------cccccCcc
Confidence            4555555555 555544 2  246799999999988877777766543345677778888642         23345789


Q ss_pred             eEEEEcCCCC
Q 025509           81 NILINNAGIM   90 (251)
Q Consensus        81 d~lv~~ag~~   90 (251)
                      |++|.|-...
T Consensus       181 DlIVsNPPYI  190 (271)
T d1nv8a_         181 EMILSNPPYV  190 (271)
T ss_dssp             CEEEECCCCB
T ss_pred             cEEEEccccc
Confidence            9999998854

>d1onfa2 c.3.1.5 (A:154-270) Glutathione reductase {Plasmodium falciparum [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Plasmodium falciparum [TaxId: 5833]

Probab=93.48  E-value=0.05  Score=36.92  Aligned_cols=33  Identities=24%  Similarity=0.238  Sum_probs=28.3

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCc
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDI   34 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~   34 (251)
                      |+++|.| +|.+|.++|..|++.|.+|.++.|.+
T Consensus        23 ~~v~IiG-gG~iG~E~A~~l~~~g~~Vtlv~~~~   55 (117)
T d1onfa2          23 KKIGIVG-SGYIAVELINVIKRLGIDSYIFARGN   55 (117)
T ss_dssp             SEEEEEC-CSHHHHHHHHHHHTTTCEEEEECSSS
T ss_pred             CEEEEEC-CchHHHHHHHHHHhccccceeeehhc
Confidence            4677776 47999999999999999999999864

>d1u8xx1 c.2.1.5 (X:3-169) Maltose-6'-phosphate glucosidase GlvA {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Maltose-6'-phosphate glucosidase GlvA
species: Bacillus subtilis [TaxId: 1423]

Probab=93.30  E-value=0.18  Score=36.36  Aligned_cols=120  Identities=13%  Similarity=0.091  Sum_probs=62.5

Q ss_pred             EEEEECCCChhHHHHHHHHHH-c----CCEEEEEecCchhHHHHHHHHHhhC--CCCceEEEEecCCCHHHHHHHHHHHH
Q 025509            2 DIVITGATSGIGTETARVLAL-R----GVHVVMGVRDIAAGKDVKETIVKEI--PSAKVDAMELDLSSLASVRNFASEYN   74 (251)
Q Consensus         2 ~vlItG~s~gIG~a~a~~l~~-~----G~~Vi~~~r~~~~~~~~~~~~~~~~--~~~~v~~~~~D~~~~~~i~~~~~~~~   74 (251)
                      .|.|.||++.-...++..++. .    +.+|++++.++++++...+.+....  .+....+...  +|..+   .   + 
T Consensus         5 KI~iIGaGsv~~~~~~~~ll~~~~~l~~~eivL~Did~~~~~~~~~~~~~~~~~~~~~~~~~~~--~d~~e---a---l-   75 (167)
T d1u8xx1           5 SIVIAGGGSTFTPGIVLMLLDHLEEFPIRKLKLYDNDKERQDRIAGACDVFIREKAPDIEFAAT--TDPEE---A---F-   75 (167)
T ss_dssp             EEEEECTTSSSHHHHHHHHHHTTTTSCEEEEEEECSCHHHHHHHHHHHHHHHHHHCTTSEEEEE--SCHHH---H---H-
T ss_pred             eEEEECCChhhhHHHHHHHHhhhhhcCCCEEEEEcCChhHHHHHHHHHHHHHHHhCCCcceEec--CChhh---c---c-
Confidence            367777755322223333332 2    2379999999988775444443211  0222333221  12211   1   1 


Q ss_pred             hcCCCeeEEEEcCCCCCCCCcCCchhhHHHHHHHH----------------HHHHHHHHHHHHHHHHhhccCCCCceEEE
Q 025509           75 IQHHQLNILINNAGIMGTPFMLSKDNIELQFATNH----------------LGHFLLTNLLLDTMKKTARKSGGEGRIIN  138 (251)
Q Consensus        75 ~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~----------------~~~~~l~~~~~~~~~~~~~~~~~~g~iv~  138 (251)
                         ..-|+||+.+|.....    -..-++.+..|+                .-+.-+++.+.+.+.+.    ++++.+++
T Consensus        76 ---~~AD~Vvitag~~~~~----g~~rd~~i~~~~Gi~~~~t~g~gg~~~~~r~i~ii~~i~~~i~~~----~P~A~li~  144 (167)
T d1u8xx1          76 ---TDVDFVMAHIRVGKYA----MRALDEQIPLKYGVVGQETCGPGGIAYGMRSIGGVLEILDYMEKY----SPDAWMLN  144 (167)
T ss_dssp             ---SSCSEEEECCCTTHHH----HHHHHHHHHHTTTCCCCSSSHHHHHHHHHHHHHHHHHHHHHHHHH----CTTCEEEE
T ss_pred             ---CCCCEEEECCCcCCCC----ceeHHHhhchhcCceeeccccCcchheehhhHHHHHHHHHHHHhh----CCCeEEEE
Confidence               2789999999974321    111222233331                22344556677777666    46788888


Q ss_pred             EcC
Q 025509          139 VSS  141 (251)
Q Consensus       139 vsS  141 (251)
                      +|-
T Consensus       145 ~TN  147 (167)
T d1u8xx1         145 YSN  147 (167)
T ss_dssp             CCS
T ss_pred             eCC
Confidence            886

>d1kyqa1 c.2.1.11 (A:1-150) Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Siroheme synthase N-terminal domain-like
domain: Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=93.29  E-value=0.04  Score=39.09  Aligned_cols=32  Identities=19%  Similarity=0.298  Sum_probs=28.4

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecC
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRD   33 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~   33 (251)
                      |++||+|| |.+|..-|+.|++.|++|.+++..
T Consensus        14 krvLViGg-G~va~~ka~~Ll~~GA~VtVvap~   45 (150)
T d1kyqa1          14 KRILLIGG-GEVGLTRLYKLMPTGCKLTLVSPD   45 (150)
T ss_dssp             CEEEEEEE-SHHHHHHHHHHGGGTCEEEEEEEE
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCC
Confidence            68999999 569999999999999999988753

>d1yova1 c.111.1.2 (A:6-534) Amyloid beta precursor protein-binding protein 1, APPBP1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Ubiquitin activating enzymes (UBA)
domain: Amyloid beta precursor protein-binding protein 1, APPBP1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.25  E-value=0.099  Score=45.06  Aligned_cols=31  Identities=23%  Similarity=0.371  Sum_probs=26.7

Q ss_pred             EEEEECCCChhHHHHHHHHHHcCC-EEEEEecC
Q 025509            2 DIVITGATSGIGTETARVLALRGV-HVVMGVRD   33 (251)
Q Consensus         2 ~vlItG~s~gIG~a~a~~l~~~G~-~Vi~~~r~   33 (251)
                      +|+|.|+ ||+|.++++.|+..|. ++.+++.+
T Consensus        27 ~VlvvG~-gglG~Ei~knLvl~GVg~itivD~d   58 (529)
T d1yova1          27 HVCLINA-TATGTEILKNLVLPGIGSFTIIDGN   58 (529)
T ss_dssp             EEEECCC-SHHHHHHHHHHHTTTCSEEEEECCS
T ss_pred             CEEEECC-CHHHHHHHHHHHHhcCCEEEEEcCC
Confidence            6889886 7999999999999997 78888654

>d1byia_ c.37.1.10 (A:) Dethiobiotin synthetase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Dethiobiotin synthetase
species: Escherichia coli [TaxId: 562]

Probab=93.20  E-value=0.024  Score=42.31  Aligned_cols=31  Identities=13%  Similarity=0.148  Sum_probs=27.0

Q ss_pred             CEEEEECCCChhHHH-----HHHHHHHcCCEEEEEe
Q 025509            1 MDIVITGATSGIGTE-----TARVLALRGVHVVMGV   31 (251)
Q Consensus         1 k~vlItG~s~gIG~a-----~a~~l~~~G~~Vi~~~   31 (251)
                      |+++|||.++|+|+.     +|..|+++|++|.+++
T Consensus         2 ~~~~i~gt~~GVGKTtvs~~La~aLa~~G~rVl~id   37 (224)
T d1byia_           2 KRYFVTGTDTEVGKTVASCALLQAAKAAGYRTAGYK   37 (224)
T ss_dssp             EEEEEEESSTTSCHHHHHHHHHHHHHHTTCCEEEEC
T ss_pred             ceEEEEECCCCccHHHHHHHHHHHHHHCCCeEEEEC
Confidence            689999999999985     5777889999999886

>d1s6ya1 c.2.1.5 (A:4-172) 6-phospho-beta-glucosidase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: 6-phospho-beta-glucosidase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=93.12  E-value=0.48  Score=34.01  Aligned_cols=121  Identities=8%  Similarity=-0.016  Sum_probs=62.8

Q ss_pred             EEEEECC-CChhHHHHHHHHHHcC----CEEEEEecCchh--HHHHHHHH---HhhCCCCceEEEEecCCCHHHHHHHHH
Q 025509            2 DIVITGA-TSGIGTETARVLALRG----VHVVMGVRDIAA--GKDVKETI---VKEIPSAKVDAMELDLSSLASVRNFAS   71 (251)
Q Consensus         2 ~vlItG~-s~gIG~a~a~~l~~~G----~~Vi~~~r~~~~--~~~~~~~~---~~~~~~~~v~~~~~D~~~~~~i~~~~~   71 (251)
                      .+.|.|| |.|.+.+++..+....    .++++.+.+++.  ++......   .... +..+.+.  ..+|..+      
T Consensus         3 KI~iIGaGs~~~~~~~~~l~~~~~~~~~~eI~L~Di~e~~~~~~~~d~~~~~~~~~~-~~~~~~~--~~td~~~------   73 (169)
T d1s6ya1           3 KIATIGGGSSYTPELVEGLIKRYHELPVGELWLVDIPEGKEKLEIVGALAKRMVEKA-GVPIEIH--LTLDRRR------   73 (169)
T ss_dssp             EEEEETTTCTTHHHHHHHHHHTTTTCCEEEEEEECCGGGHHHHHHHHHHHHHHHHHT-TCCCEEE--EESCHHH------
T ss_pred             EEEEECCChhhHHHHHHHHHHhccccCCCEEEEEcCCccHHHHHHHHHHHHHHHHhc-CCCceee--ecCCchh------
Confidence            4677776 5677777776665431    389999998754  22222111   1111 2222222  2334321      


Q ss_pred             HHHhcCCCeeEEEEcCCCCCCCCcC--------------CchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEE
Q 025509           72 EYNIQHHQLNILINNAGIMGTPFML--------------SKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRII  137 (251)
Q Consensus        72 ~~~~~~g~id~lv~~ag~~~~~~~~--------------~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv  137 (251)
                      .+    ..-|++|+.||......+.              ....... + ....-...+++.+.+.+.+.    ++.+.++
T Consensus        74 al----~gaDvVv~ta~~~~~~~~~r~~~i~~~~gi~~~~t~g~~~-~-~~~~~n~~i~~~i~~~i~~~----~pda~~i  143 (169)
T d1s6ya1          74 AL----DGADFVTTQFRVGGLEARAKDERIPLKYGVIGQETNGPGG-L-FKGLRTIPVILDIIRDMEEL----CPDAWLI  143 (169)
T ss_dssp             HH----TTCSEEEECCCTTHHHHHHHHHHTGGGGTCCCCSSSTHHH-H-HHHHHHHHHHHHHHHHHHHH----CTTCEEE
T ss_pred             hc----CCCCEEEEccccCCCCCeehhhhhhhhcCceeccccCcch-h-hhccccHHHHHHHHHHHhhc----CCCeEEE
Confidence            11    2679999999975321000              0000000 1 11234456667777777776    4678888


Q ss_pred             EEcC
Q 025509          138 NVSS  141 (251)
Q Consensus       138 ~vsS  141 (251)
                      ++|-
T Consensus       144 ~vtN  147 (169)
T d1s6ya1         144 NFTN  147 (169)
T ss_dssp             ECSS
T ss_pred             EeCC
Confidence            8875

>d1oria_ c.66.1.6 (A:) Protein arginine N-methyltransferase 1, PRMT1 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Arginine methyltransferase
domain: Protein arginine N-methyltransferase 1, PRMT1
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=93.07  E-value=0.51  Score=37.37  Aligned_cols=73  Identities=12%  Similarity=0.120  Sum_probs=51.1

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCC-EEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCC
Q 025509            1 MDIVITGATSGIGTETARVLALRGV-HVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQ   79 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~   79 (251)
                      |+||-.|++.|+   ++..+++.|+ +|+.++.++ ....+.+......-..++.++..|+.+.+          ....+
T Consensus        35 ~~VLDiGcG~G~---ls~~aa~~Ga~~V~avd~s~-~~~~a~~~~~~n~~~~~v~~~~~~~~~~~----------~~~~~  100 (316)
T d1oria_          35 KVVLDVGSGTGI---LCMFAAKAGARKVIGIECSS-ISDYAVKIVKANKLDHVVTIIKGKVEEVE----------LPVEK  100 (316)
T ss_dssp             CEEEEETCTTSH---HHHHHHHTTCSEEEEEECST-THHHHHHHHHHTTCTTTEEEEESCTTTCC----------CSSSC
T ss_pred             CEEEEEecCCcH---HHHHHHHhCCCEEEEEcCcH-HHhhhhhHHHHhCCccccceEeccHHHcc----------cccce
Confidence            578999999885   4566778886 799999875 45555555544433567999999987642          12247


Q ss_pred             eeEEEEcC
Q 025509           80 LNILINNA   87 (251)
Q Consensus        80 id~lv~~a   87 (251)
                      +|+++...
T Consensus       101 ~D~ivs~~  108 (316)
T d1oria_         101 VDIIISEW  108 (316)
T ss_dssp             EEEEEECC
T ss_pred             eEEEeeee
Confidence            99998764

>d1jg1a_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=93.00  E-value=0.28  Score=36.91  Aligned_cols=75  Identities=17%  Similarity=0.086  Sum_probs=56.9

Q ss_pred             EEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCee
Q 025509            2 DIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQLN   81 (251)
Q Consensus         2 ~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~id   81 (251)
                      +||..|+++|--.++...++  |.+|+.+.++++-.+...+.+.+. .-.++.++..|..+          -....++.|
T Consensus        81 ~VLeIGsGsGY~taila~l~--g~~V~~ie~~~~l~~~a~~~l~~~-g~~nv~~~~gd~~~----------g~~~~~pfD  147 (215)
T d1jg1a_          81 NILEVGTGSGWNAALISEIV--KTDVYTIERIPELVEFAKRNLERA-GVKNVHVILGDGSK----------GFPPKAPYD  147 (215)
T ss_dssp             CEEEECCTTSHHHHHHHHHH--CSCEEEEESCHHHHHHHHHHHHHT-TCCSEEEEESCGGG----------CCGGGCCEE
T ss_pred             eEEEecCCCChhHHHHHHhh--CceeEEEeccHHHHHHHHHHHHHc-CCceeEEEECcccc----------CCcccCcce
Confidence            68999999999888888776  467999999977667666666553 24679999999853          112336899


Q ss_pred             EEEEcCCC
Q 025509           82 ILINNAGI   89 (251)
Q Consensus        82 ~lv~~ag~   89 (251)
                      .++.+++.
T Consensus       148 ~Iiv~~a~  155 (215)
T d1jg1a_         148 VIIVTAGA  155 (215)
T ss_dssp             EEEECSBB
T ss_pred             eEEeeccc
Confidence            99999886

>d2bzga1 c.66.1.36 (A:17-245) Thiopurine S-methyltransferase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Thiopurine S-methyltransferase
domain: Thiopurine S-methyltransferase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.97  E-value=0.12  Score=39.17  Aligned_cols=77  Identities=9%  Similarity=0.045  Sum_probs=52.6

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhh----------------CCCCceEEEEecCCCHH
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKE----------------IPSAKVDAMELDLSSLA   64 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~----------------~~~~~v~~~~~D~~~~~   64 (251)
                      .+||..|++.|   ..+..|+++|++|+.++-++..++.+.+.....                ..+..+.++.+|+.+..
T Consensus        47 ~rvLd~GCG~G---~~a~~LA~~G~~V~gvD~S~~ai~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~l~  123 (229)
T d2bzga1          47 LRVFFPLCGKA---VEMKWFADRGHSVVGVEISELGIQEFFTEQNLSYSEEPITEIPGTKVFKSSSGNISLYCCSIFDLP  123 (229)
T ss_dssp             CEEEETTCTTC---THHHHHHHTTCEEEEECSCHHHHHHHHHHTTCCEEEEECTTSTTCEEEEETTSSEEEEESCGGGGG
T ss_pred             CEEEEeCCCCc---HHHHHHHhCCCcEEEEeCCHHHHHHHHHHhhccccccchhcccccceeeecCCcEEEEEcchhhcc
Confidence            36899999987   458889999999999999988777665543211                11345777888875422


Q ss_pred             HHHHHHHHHHhcCCCeeEEEEcCCC
Q 025509           65 SVRNFASEYNIQHHQLNILINNAGI   89 (251)
Q Consensus        65 ~i~~~~~~~~~~~g~id~lv~~ag~   89 (251)
                               ....+.+|+++....+
T Consensus       124 ---------~~~~~~fd~i~~~~~l  139 (229)
T d2bzga1         124 ---------RTNIGKFDMIWDRGAL  139 (229)
T ss_dssp             ---------GSCCCCEEEEEESSST
T ss_pred             ---------ccccCceeEEEEEEEE
Confidence                     1223568888776654

>d1up7a1 c.2.1.5 (A:1-162) 6-phospho-beta-glucosidase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: 6-phospho-beta-glucosidase
species: Thermotoga maritima [TaxId: 2336]

Probab=92.93  E-value=0.16  Score=36.48  Aligned_cols=76  Identities=14%  Similarity=0.028  Sum_probs=42.3

Q ss_pred             CEEEEECCCChhHHHHHHH-HHH-c----CCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHH
Q 025509            1 MDIVITGATSGIGTETARV-LAL-R----GVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYN   74 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~-l~~-~----G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~   74 (251)
                      +++.|.||++ +|.+.+-. +++ .    +.++++++.++++++...+...... .....+.. - ++.+      +.+ 
T Consensus         1 mKIaiIGaGs-~g~~~~~~~l~~~~~~~~~~el~L~Did~~k~~~~~d~~~~~~-~~~~~~~~-t-~~~~------~~l-   69 (162)
T d1up7a1           1 MRIAVIGGGS-SYTPELVKGLLDISEDVRIDEVIFYDIDEEKQKIVVDFVKRLV-KDRFKVLI-S-DTFE------GAV-   69 (162)
T ss_dssp             CEEEEETTTC-TTHHHHHHHHHHHTTTSCCCEEEEECSCHHHHHHHHHHHHHHH-TTSSEEEE-C-SSHH------HHH-
T ss_pred             CEEEEECCCH-HHHHHHHHHHHhcccccCccEEEEEecCcHHHHHHHHHHHhhh-ccCceEEE-e-cCcc------ccc-
Confidence            4688888854 56555533 222 1    3489999999988765443333222 12222221 1 2221      112 


Q ss_pred             hcCCCeeEEEEcCCCC
Q 025509           75 IQHHQLNILINNAGIM   90 (251)
Q Consensus        75 ~~~g~id~lv~~ag~~   90 (251)
                         ...|++|..||..
T Consensus        70 ---~~aDvVVita~~~   82 (162)
T d1up7a1          70 ---VDAKYVIFQFRPG   82 (162)
T ss_dssp             ---TTCSEEEECCCTT
T ss_pred             ---CCCCEEEEecccC
Confidence               2679999999964

>d1j4aa1 c.2.1.4 (A:104-300) D-lactate dehydrogenase {Lactobacillus helveticus [TaxId: 1587]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-lactate dehydrogenase
species: Lactobacillus helveticus [TaxId: 1587]

Probab=92.87  E-value=0.09  Score=39.17  Aligned_cols=34  Identities=18%  Similarity=0.094  Sum_probs=28.8

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCch
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIA   35 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~   35 (251)
                      |++.|.| -|.||+.+|+.|...|++|+..++...
T Consensus        44 k~vgIiG-~G~IG~~va~~l~~fg~~V~~~d~~~~   77 (197)
T d1j4aa1          44 QVVGVVG-TGHIGQVFMQIMEGFGAKVITYDIFRN   77 (197)
T ss_dssp             SEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSCC
T ss_pred             CeEEEec-ccccchhHHHhHhhhcccccccCcccc
Confidence            5677886 579999999999999999999887644

>d1i36a2 c.2.1.6 (A:1-152) Conserved hypothetical protein MTH1747 {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Conserved hypothetical protein MTH1747
species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]

Probab=92.87  E-value=0.11  Score=36.79  Aligned_cols=39  Identities=21%  Similarity=0.243  Sum_probs=31.4

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHH
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDV   40 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~   40 (251)
                      |+|-|.| .|-+|.++|+.|.++|++|+..++++.+....
T Consensus         1 MkIgiIG-~G~mG~~ia~~l~~~g~~v~~~~~~~~~~~~~   39 (152)
T d1i36a2           1 LRVGFIG-FGEVAQTLASRLRSRGVEVVTSLEGRSPSTIE   39 (152)
T ss_dssp             CEEEEES-CSHHHHHHHHHHHHTTCEEEECCTTCCHHHHH
T ss_pred             CEEEEEc-HHHHHHHHHHHHHHCCCeEEEEcCchhHHHHH
Confidence            4567775 59999999999999999999888876655443

>d1l7da1 c.2.1.4 (A:144-326) Nicotinamide nucleotide transhydrogenase dI component {Rhodospirillum rubrum [TaxId: 1085]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Nicotinamide nucleotide transhydrogenase dI component
species: Rhodospirillum rubrum [TaxId: 1085]

Probab=92.80  E-value=0.26  Score=36.05  Aligned_cols=40  Identities=15%  Similarity=0.164  Sum_probs=33.3

Q ss_pred             EEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHH
Q 025509            2 DIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKE   42 (251)
Q Consensus         2 ~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~   42 (251)
                      +|+|.|+ |-.|.+.++-....|++|.+.+.+..+++++.+
T Consensus        31 ~VvViGa-GvaG~~Aa~~A~~lGA~V~v~D~~~~~~~~l~~   70 (183)
T d1l7da1          31 RVLVFGV-GVAGLQAIATAKRLGAVVMATDVRAATKEQVES   70 (183)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCEEEEECSCSTTHHHHHH
T ss_pred             EEEEEcC-cHHHHHHHHHHHHcCCEEEEEeccHHHHHHHHH
Confidence            4778875 578899999999999999999999888777654

>d1h6va2 c.3.1.5 (A:171-292) Mammalian thioredoxin reductase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Mammalian thioredoxin reductase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=92.80  E-value=0.085  Score=35.98  Aligned_cols=31  Identities=32%  Similarity=0.384  Sum_probs=26.7

Q ss_pred             EEEEECCCChhHHHHHHHHHHcCCEEEEEecC
Q 025509            2 DIVITGATSGIGTETARVLALRGVHVVMGVRD   33 (251)
Q Consensus         2 ~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~   33 (251)
                      +++|.| +|.||.++|..|.+.|.+|.++.|+
T Consensus        22 ~vvIIG-gG~iG~E~A~~l~~lG~~Vtii~~~   52 (122)
T d1h6va2          22 KTLVVG-ASYVALECAGFLAGIGLDVTVMVRS   52 (122)
T ss_dssp             SEEEEC-CSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred             eEEEEC-CCccHHHHHHHHhhcCCeEEEEEec
Confidence            466776 5799999999999999999988876

>d1dl5a1 c.66.1.7 (A:1-213) Protein-L-isoaspartyl O-methyltransferase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Thermotoga maritima [TaxId: 2336]

Probab=92.77  E-value=0.3  Score=36.54  Aligned_cols=77  Identities=10%  Similarity=-0.032  Sum_probs=55.1

Q ss_pred             EEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCee
Q 025509            2 DIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQLN   81 (251)
Q Consensus         2 ~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~id   81 (251)
                      +||-.|+++|--.++..++...+.+|+.++.++...+.+.+.+.+.. -.++.++..|..+.          ....+++|
T Consensus        78 ~VLdiG~GtG~~s~~la~~~~~~g~V~~id~~~~~~~~a~~~~~~~~-~~n~~~~~~d~~~~----------~~~~~~fD  146 (213)
T d1dl5a1          78 RVLEIGGGTGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVERLG-IENVIFVCGDGYYG----------VPEFSPYD  146 (213)
T ss_dssp             EEEEECCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHTT-CCSEEEEESCGGGC----------CGGGCCEE
T ss_pred             eEEEecCccchhHHHHHHHhCCCCcEEEeecchhhHHHhhhhHhhhc-ccccccccCchHHc----------cccccchh
Confidence            68999999887777666565555699999999988888887776543 34577777776431          11225799


Q ss_pred             EEEEcCCC
Q 025509           82 ILINNAGI   89 (251)
Q Consensus        82 ~lv~~ag~   89 (251)
                      .++.+++.
T Consensus       147 ~I~~~~~~  154 (213)
T d1dl5a1         147 VIFVTVGV  154 (213)
T ss_dssp             EEEECSBB
T ss_pred             hhhhhccH
Confidence            99998875

>d2nxca1 c.66.1.39 (A:1-254) PrmA-like protein TTHA0656 (TT0836) {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Ribosomal protein L11 methyltransferase PrmA
domain: PrmA-like protein TTHA0656 (TT0836)
species: Thermus thermophilus [TaxId: 274]

Probab=92.73  E-value=0.39  Score=36.98  Aligned_cols=71  Identities=14%  Similarity=0.110  Sum_probs=50.4

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      ++||=.|+++|+   ++..+++.|++|+.++.++...+.+.+..+..  +..+.++..|+.      .    . ...+++
T Consensus       122 ~~VLDiGcGsG~---l~i~aa~~g~~V~gvDis~~av~~A~~na~~n--~~~~~~~~~d~~------~----~-~~~~~f  185 (254)
T d2nxca1         122 DKVLDLGTGSGV---LAIAAEKLGGKALGVDIDPMVLPQAEANAKRN--GVRPRFLEGSLE------A----A-LPFGPF  185 (254)
T ss_dssp             CEEEEETCTTSH---HHHHHHHTTCEEEEEESCGGGHHHHHHHHHHT--TCCCEEEESCHH------H----H-GGGCCE
T ss_pred             CEEEEcccchhH---HHHHHHhcCCEEEEEECChHHHHHHHHHHHHc--CCceeEEecccc------c----c-cccccc
Confidence            467778999886   33456778999999999999888888777655  345667776642      1    1 122589


Q ss_pred             eEEEEcC
Q 025509           81 NILINNA   87 (251)
Q Consensus        81 d~lv~~a   87 (251)
                      |+++.|.
T Consensus       186 D~V~ani  192 (254)
T d2nxca1         186 DLLVANL  192 (254)
T ss_dssp             EEEEEEC
T ss_pred             chhhhcc
Confidence            9999874

>d1d7ya2 c.3.1.5 (A:116-236) NADH-dependent ferredoxin reductase, BphA4 {Pseudomonas sp., KKS102 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent ferredoxin reductase, BphA4
species: Pseudomonas sp., KKS102 [TaxId: 306]

Probab=92.69  E-value=0.098  Score=35.60  Aligned_cols=34  Identities=29%  Similarity=0.322  Sum_probs=28.8

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCch
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIA   35 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~   35 (251)
                      |+++|.| +|.+|.++|..|++.|.+|.++.+++.
T Consensus        31 ~~vvIIG-gG~iG~E~A~~l~~~g~~Vtli~~~~~   64 (121)
T d1d7ya2          31 SRLLIVG-GGVIGLELAATARTAGVHVSLVETQPR   64 (121)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred             CeEEEEC-cchhHHHHHHHhhcccceEEEEeeccc
Confidence            4566665 579999999999999999999998764

>d1l3ia_ c.66.1.22 (A:) Precorrin-6Y methyltransferase (CbiT) {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Precorrin-6Y methyltransferase (CbiT)
domain: Precorrin-6Y methyltransferase (CbiT)
species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]

Probab=92.64  E-value=0.61  Score=33.73  Aligned_cols=74  Identities=20%  Similarity=0.085  Sum_probs=51.2

Q ss_pred             EEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCee
Q 025509            2 DIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQLN   81 (251)
Q Consensus         2 ~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~id   81 (251)
                      +||=.|+++|   .++.+|++.+.+|+.++.++..++.+.+.+++..-..++.++..|..          +.......+|
T Consensus        36 ~VLDiGcGsG---~~s~~lA~~~~~V~avD~~~~~l~~a~~n~~~~gl~~~v~~~~gda~----------~~~~~~~~~D  102 (186)
T d1l3ia_          36 VAVDVGCGTG---GVTLELAGRVRRVYAIDRNPEAISTTEMNLQRHGLGDNVTLMEGDAP----------EALCKIPDID  102 (186)
T ss_dssp             EEEEESCTTS---HHHHHHHTTSSEEEEEESCHHHHHHHHHHHHHTTCCTTEEEEESCHH----------HHHTTSCCEE
T ss_pred             EEEEEECCeE---cccccccccceEEEEecCCHHHHHHHHHHHHHcCCCcceEEEECchh----------hcccccCCcC
Confidence            3455677765   33345566677999999999999988888877543457899988751          1112335899


Q ss_pred             EEEEcCC
Q 025509           82 ILINNAG   88 (251)
Q Consensus        82 ~lv~~ag   88 (251)
                      .++.+.+
T Consensus       103 ~v~~~~~  109 (186)
T d1l3ia_         103 IAVVGGS  109 (186)
T ss_dssp             EEEESCC
T ss_pred             EEEEeCc
Confidence            9998754

>d1wy7a1 c.66.1.32 (A:4-204) Hypothetical protein PH1948 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Ta1320-like
domain: Hypothetical protein PH1948
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=92.60  E-value=0.55  Score=34.63  Aligned_cols=69  Identities=22%  Similarity=0.202  Sum_probs=48.7

Q ss_pred             EEEEECCCCh-hHHHHHHHHHHcCC-EEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCC
Q 025509            2 DIVITGATSG-IGTETARVLALRGV-HVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQ   79 (251)
Q Consensus         2 ~vlItG~s~g-IG~a~a~~l~~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~   79 (251)
                      +||=.|+++| +|.    .++..|+ +|+.++.++..++.+.+.+...  +....++..|+.+.             .++
T Consensus        49 ~vLDlg~GtG~l~i----~a~~~g~~~v~~vdi~~~~~~~a~~N~~~~--~~~~~~~~~d~~~~-------------~~~  109 (201)
T d1wy7a1          49 VVADLGAGTGVLSY----GALLLGAKEVICVEVDKEAVDVLIENLGEF--KGKFKVFIGDVSEF-------------NSR  109 (201)
T ss_dssp             EEEEETCTTCHHHH----HHHHTTCSEEEEEESCHHHHHHHHHHTGGG--TTSEEEEESCGGGC-------------CCC
T ss_pred             EEEECcCcchHHHH----HHHHcCCCEEEEEcCcHHHHHHHHHHHHHc--CCCceEEECchhhh-------------CCc
Confidence            5666677755 443    3456776 8999999988877777665443  55788888887432             347


Q ss_pred             eeEEEEcCCC
Q 025509           80 LNILINNAGI   89 (251)
Q Consensus        80 id~lv~~ag~   89 (251)
                      +|+||.|...
T Consensus       110 fD~Vi~nPP~  119 (201)
T d1wy7a1         110 VDIVIMNPPF  119 (201)
T ss_dssp             CSEEEECCCC
T ss_pred             CcEEEEcCcc
Confidence            9999999865

>d1obba1 c.2.1.5 (A:2-172) Alpha-glucosidase AglA {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Alpha-glucosidase AglA
species: Thermotoga maritima [TaxId: 2336]

Probab=92.59  E-value=0.58  Score=33.62  Aligned_cols=117  Identities=15%  Similarity=0.111  Sum_probs=65.1

Q ss_pred             CEEEEECCCChhHHH--HHHHHHHc----CCEEEEEecCchhHHHHHHHHHh---hCCCCceEEEEecCCCHHHHHHHHH
Q 025509            1 MDIVITGATSGIGTE--TARVLALR----GVHVVMGVRDIAAGKDVKETIVK---EIPSAKVDAMELDLSSLASVRNFAS   71 (251)
Q Consensus         1 k~vlItG~s~gIG~a--~a~~l~~~----G~~Vi~~~r~~~~~~~~~~~~~~---~~~~~~v~~~~~D~~~~~~i~~~~~   71 (251)
                      +++.|.|| |.+|.+  +...++..    +.++++++.++++++.....+.+   .. +....+...  +|.++   .+ 
T Consensus         3 mKI~iIGa-Gsvg~t~~~~~~l~~~~~l~~~eivL~Did~~~~~~~~~~~~~~~~~~-~~~~~i~~~--td~~e---aL-   74 (171)
T d1obba1           3 VKIGIIGA-GSAVFSLRLVSDLCKTPGLSGSTVTLMDIDEERLDAILTIAKKYVEEV-GADLKFEKT--MNLDD---VI-   74 (171)
T ss_dssp             CEEEEETT-TCHHHHHHHHHHHHTCGGGTTCEEEEECSCHHHHHHHHHHHHHHHHHT-TCCCEEEEE--SCHHH---HH-
T ss_pred             cEEEEECC-CHHHhHHHHHHHHHhccccCCCEEEEEeCCchHHHHHHHHHHHHHHhc-CCCeEEEEe--CChhh---cc-
Confidence            35778886 556654  44445432    35899999998887655444433   22 223333321  22222   11 


Q ss_pred             HHHhcCCCeeEEEEcCCCCCCCCcCCchhhHHHHHHH------------------------HHHHHHHHHHHHHHHHHhh
Q 025509           72 EYNIQHHQLNILINNAGIMGTPFMLSKDNIELQFATN------------------------HLGHFLLTNLLLDTMKKTA  127 (251)
Q Consensus        72 ~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~n------------------------~~~~~~l~~~~~~~~~~~~  127 (251)
                            ...|++|++++....      +.++....+.                        ..-..-+++.+.+.+.+. 
T Consensus        75 ------~dad~Vv~~~~~g~~------~~~~~~~~i~~~~g~~~~~~~~~~~~~g~~~~~~~~rn~~i~~~i~~~i~~~-  141 (171)
T d1obba1          75 ------IDADFVINTAMVGGH------TYLEKVRQIGEKYGYYRGIDAQEFNMVSDYYTFSNYNQLKYFVDIARKIEKL-  141 (171)
T ss_dssp             ------TTCSEEEECCCTTHH------HHHHHHHHHHHHTTCTTCTTCBTTBCCTTCCSSSCHHHHHHHHHHHHHHHHH-
T ss_pred             ------cCCCeEeeecccccc------cceeeehhcchhhhhccCCCccccCCCCCcceeeecchHHHHHHHHHHHHHH-
Confidence                  268999999875321      1111111100                        123556777788888776 


Q ss_pred             ccCCCCceEEEEcC
Q 025509          128 RKSGGEGRIINVSS  141 (251)
Q Consensus       128 ~~~~~~g~iv~vsS  141 (251)
                         ++.+.++++|-
T Consensus       142 ---~p~a~~i~~TN  152 (171)
T d1obba1         142 ---SPKAWYLQAAN  152 (171)
T ss_dssp             ---CTTCEEEECSS
T ss_pred             ---CcCeEEEEECC
Confidence               35778888886

>d1m6ya2 c.66.1.23 (A:2-114,A:216-294) TM0872, methyltransferase domain {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: MraW-like putative methyltransferases
domain: TM0872, methyltransferase domain
species: Thermotoga maritima [TaxId: 2336]

Probab=92.50  E-value=0.25  Score=36.42  Aligned_cols=77  Identities=10%  Similarity=0.094  Sum_probs=56.1

Q ss_pred             EECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCeeEEE
Q 025509            5 ITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQLNILI   84 (251)
Q Consensus         5 ItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~id~lv   84 (251)
                      +|-|+||...++.+.+ . +.+|+.+++++..++...+.+.+ + +.++.++..++++...+.   ...  ...++|.++
T Consensus        30 ~t~G~Gghs~~il~~~-~-~~~vi~~D~d~~~l~~a~~~l~~-~-~~r~~~~~~~f~~~~~~~---~~~--~~~~vdgIl  100 (192)
T d1m6ya2          30 CTVGEGGHSRAILEHC-P-GCRIIGIDVDSEVLRIAEEKLKE-F-SDRVSLFKVSYREADFLL---KTL--GIEKVDGIL  100 (192)
T ss_dssp             TTCTTSHHHHHHHHHC-T-TCEEEEEESCHHHHHHHHHHTGG-G-TTTEEEEECCGGGHHHHH---HHT--TCSCEEEEE
T ss_pred             ecCCCcHHHHHHHhcC-C-CCeEEEeechHHHHHHHHHhhcc-c-cccccchhHHHhhHHHHH---HHc--CCCCcceee
Confidence            3677888888888876 2 46999999998887777665543 3 567999999887754432   221  235899999


Q ss_pred             EcCCCC
Q 025509           85 NNAGIM   90 (251)
Q Consensus        85 ~~ag~~   90 (251)
                      .-.|+.
T Consensus       101 ~DlGvS  106 (192)
T d1m6ya2         101 MDLGVS  106 (192)
T ss_dssp             EECSCC
T ss_pred             eccchh
Confidence            999974

>d1nhpa2 c.3.1.5 (A:120-242) NADH peroxidase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH peroxidase
species: Enterococcus faecalis [TaxId: 1351]

Probab=92.49  E-value=0.11  Score=35.36  Aligned_cols=33  Identities=27%  Similarity=0.256  Sum_probs=28.2

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCc
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDI   34 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~   34 (251)
                      |+++|.| +|.+|..+|..|++.|.+|.++.+.+
T Consensus        31 k~vvViG-gG~iG~E~A~~l~~~g~~Vtlie~~~   63 (123)
T d1nhpa2          31 NNVVVIG-SGYIGIEAAEAFAKAGKKVTVIDILD   63 (123)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred             CEEEEEC-ChHHHHHHHHHhhccceEEEEEEecC
Confidence            4567775 57999999999999999999998865

>d2fhpa1 c.66.1.46 (A:1-182) Putative methylase EF2452 {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: YhhF-like
domain: Putative methylase EF2452
species: Enterococcus faecalis [TaxId: 1351]

Probab=92.35  E-value=0.44  Score=34.63  Aligned_cols=72  Identities=18%  Similarity=0.300  Sum_probs=49.6

Q ss_pred             CCCChhHHHHHHHHHHcCC-EEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCeeEEEE
Q 025509            7 GATSGIGTETARVLALRGV-HVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQLNILIN   85 (251)
Q Consensus         7 G~s~gIG~a~a~~l~~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~id~lv~   85 (251)
                      .|+|++|.+.    +.+|+ +|++++.+.....-+.+.+.......++.++..|+.      +.++++.....++|+|+.
T Consensus        50 aGsG~~g~ea----~srGa~~v~~ve~~~~a~~~~~~N~~~~~~~~~~~i~~~D~~------~~l~~~~~~~~~fDlIfl  119 (182)
T d2fhpa1          50 SGSGGLAIEA----VSRGMDKSICIEKNFAALKVIKENIAITKEPEKFEVRKMDAN------RALEQFYEEKLQFDLVLL  119 (182)
T ss_dssp             CTTCHHHHHH----HHTTCSEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHH------HHHHHHHHTTCCEEEEEE
T ss_pred             ccccccccee----eecchhHHHHHHHHHHHHHHHHHHhhhhhcccccccccccch------hhhhhhcccCCCcceEEe
Confidence            4667788754    44777 799999998887777777765433456888888873      334444444458999986


Q ss_pred             cCC
Q 025509           86 NAG   88 (251)
Q Consensus        86 ~ag   88 (251)
                      ...
T Consensus       120 DPP  122 (182)
T d2fhpa1         120 DPP  122 (182)
T ss_dssp             CCC
T ss_pred             chh
Confidence            653

>d2i6ga1 c.66.1.44 (A:1-198) Putative methyltransferase TehB {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: TehB-like
domain: Putative methyltransferase TehB
species: Salmonella typhimurium [TaxId: 90371]

Probab=92.29  E-value=1.2  Score=32.25  Aligned_cols=72  Identities=15%  Similarity=0.162  Sum_probs=50.9

Q ss_pred             EEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCee
Q 025509            2 DIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQLN   81 (251)
Q Consensus         2 ~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~id   81 (251)
                      +||=.|++.|.   .+..|+++|++|+.++.++..++.+.+...+.. -..+.+...|+.+..           -.+.+|
T Consensus        33 rvLDiGcG~G~---~~~~la~~g~~v~gvD~s~~~l~~a~~~~~~~~-~~~~~~~~~d~~~~~-----------~~~~fD   97 (198)
T d2i6ga1          33 RTLDLGCGNGR---NSLYLAANGYDVTAWDKNPASMANLERIKAAEG-LDNLQTDLVDLNTLT-----------FDGEYD   97 (198)
T ss_dssp             EEEEETCTTSH---HHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT-CTTEEEEECCTTTCC-----------CCCCEE
T ss_pred             cEEEECCCCCH---HHHHHHHHhhhhccccCcHHHHHHHHHHhhhcc-ccchhhhheeccccc-----------cccccc
Confidence            57888886554   556888999999999999887777766554431 234777788876532           114789


Q ss_pred             EEEEcCC
Q 025509           82 ILINNAG   88 (251)
Q Consensus        82 ~lv~~ag   88 (251)
                      +|+.+.-
T Consensus        98 ~I~~~~~  104 (198)
T d2i6ga1          98 FILSTVV  104 (198)
T ss_dssp             EEEEESC
T ss_pred             EEEEeee
Confidence            9997764

>d1v59a2 c.3.1.5 (A:161-282) Dihydrolipoamide dehydrogenase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=92.07  E-value=0.11  Score=35.30  Aligned_cols=34  Identities=24%  Similarity=0.193  Sum_probs=28.9

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCch
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIA   35 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~   35 (251)
                      |+++|.| +|.||.++|..|++.|.+|.++.+++.
T Consensus        24 ~~~vIiG-~G~ig~E~A~~l~~lG~~Vtii~~~~~   57 (122)
T d1v59a2          24 KRLTIIG-GGIIGLEMGSVYSRLGSKVTVVEFQPQ   57 (122)
T ss_dssp             SEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred             CeEEEEC-CCchHHHHHHHHHhhCcceeEEEeccc
Confidence            4677776 469999999999999999999988653

>d1b0aa1 c.2.1.7 (A:123-288) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Escherichia coli [TaxId: 562]

Probab=92.03  E-value=0.15  Score=36.76  Aligned_cols=35  Identities=23%  Similarity=0.317  Sum_probs=29.1

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCch
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIA   35 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~   35 (251)
                      |+++|.|-|.-+|+-++..|.++|++|.++.+...
T Consensus        38 K~v~VIGrS~~VG~Pla~lL~~~gatVt~~h~~t~   72 (166)
T d1b0aa1          38 LNAVVIGASNIVGRPMSMELLLAGCTTTVTHRFTK   72 (166)
T ss_dssp             CEEEEECCCTTTHHHHHHHHHTTTCEEEEECSSCS
T ss_pred             ceEEEEeccccccHHHHHHHHHhhccccccccccc
Confidence            67899999999999999999999999887765443

>d2igta1 c.66.1.51 (A:1-309) Putative methyltransferase Atu0340 {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Putative methyltransferase Atu0340
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=91.94  E-value=1.1  Score=35.53  Aligned_cols=77  Identities=16%  Similarity=-0.007  Sum_probs=51.3

Q ss_pred             EEEECC-CChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCC-CCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            3 IVITGA-TSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIP-SAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         3 vlItG~-s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~-~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      ||=..+ +|+++.+    ++..|++|+.++.+...++.+.+.+..... ...+.++..|+.      +.+++...+..++
T Consensus       136 VLdlf~~tG~~sl~----aa~~GA~V~~VD~s~~al~~a~~N~~ln~~~~~~~~~i~~D~~------~~l~~~~~~~~~f  205 (309)
T d2igta1         136 VLNLFGYTGVASLV----AAAAGAEVTHVDASKKAIGWAKENQVLAGLEQAPIRWICEDAM------KFIQREERRGSTY  205 (309)
T ss_dssp             EEEETCTTCHHHHH----HHHTTCEEEEECSCHHHHHHHHHHHHHHTCTTSCEEEECSCHH------HHHHHHHHHTCCB
T ss_pred             EEEecCCCcHHHHH----HHhCCCeEEEEeChHHHHHHHHHhhhhhcccCCcEEEEeCCHH------HhHHHHhhcCCCC
Confidence            443333 4544444    345789999999999888888887765432 346888888873      3344444444589


Q ss_pred             eEEEEcCCC
Q 025509           81 NILINNAGI   89 (251)
Q Consensus        81 d~lv~~ag~   89 (251)
                      |+||.+...
T Consensus       206 D~IilDPP~  214 (309)
T d2igta1         206 DIILTDPPK  214 (309)
T ss_dssp             SEEEECCCS
T ss_pred             CEEEECCCc
Confidence            999998754

>d2csua3 c.23.4.1 (A:291-453) Acetate-CoA ligase alpha chain, AcdA, domains 2 and 3 {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: Succinyl-CoA synthetase domains
family: Succinyl-CoA synthetase domains
domain: Acetate-CoA ligase alpha chain, AcdA, domains 2 and 3
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=91.92  E-value=0.6  Score=33.03  Aligned_cols=81  Identities=17%  Similarity=0.161  Sum_probs=52.1

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCC---CHHHHHHHHHHHHhcC
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLS---SLASVRNFASEYNIQH   77 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~---~~~~i~~~~~~~~~~~   77 (251)
                      +++.|.+.|||.|--++..+.+.|.++.  .-+    ++..+++.+..|.....--.+|+.   +.+.+.+.++.+.+ .
T Consensus         4 ~rvaiit~sGG~~~l~aD~~~~~Gl~l~--~l~----~~t~~~L~~~lp~~~~~~NPlD~~~~~~~~~~~~~l~~~~~-d   76 (163)
T d2csua3           4 NKVAIMTNAGGPGVLTADELDKRGLKLA--TLE----EKTIEELRSFLPPMAAVKNPVDMIASARGEDYYRTAKLLLQ-D   76 (163)
T ss_dssp             SEEEEEESCHHHHHHHHHHHHTTTCEEC--CCC----HHHHHHHHHHSCTTCEESSEEECCTTCCHHHHHHHHHHHHH-S
T ss_pred             CeEEEEECChHHHHHHHHHHHHcCCccC--CCC----HHHHHHHHHhCCCcccCCCcccccCCCCHHHHHHHHHHHHc-C
Confidence            4688999999999999999999997764  222    344445555555322222234543   56777777776554 4


Q ss_pred             CCeeEEEEcCC
Q 025509           78 HQLNILINNAG   88 (251)
Q Consensus        78 g~id~lv~~ag   88 (251)
                      +.+|.++....
T Consensus        77 ~~vd~v~v~~~   87 (163)
T d2csua3          77 PNVDMLIAICV   87 (163)
T ss_dssp             TTCSEEEEEEE
T ss_pred             CCcCEEEEeec
Confidence            57887765443

>d1djqa2 c.3.1.1 (A:490-645) Trimethylamine dehydrogenase, C-terminal domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: C-terminal domain of adrenodoxin reductase-like
domain: Trimethylamine dehydrogenase, C-terminal domain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=91.91  E-value=0.14  Score=36.14  Aligned_cols=34  Identities=26%  Similarity=0.140  Sum_probs=28.4

Q ss_pred             EEEE-CCCChhHHHHHHHHHHcCCEEEEEecCchh
Q 025509            3 IVIT-GATSGIGTETARVLALRGVHVVMGVRDIAA   36 (251)
Q Consensus         3 vlIt-G~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~   36 (251)
                      ++|. .+++.||.++|..|++.|++|.++.+.+.-
T Consensus        42 vvi~d~ggg~ig~e~A~~la~~G~~Vtlv~~~~~~   76 (156)
T d1djqa2          42 VVILNADTYFMAPSLAEKLATAGHEVTIVSGVHLA   76 (156)
T ss_dssp             EEEEECCCSSHHHHHHHHHHHTTCEEEEEESSCTT
T ss_pred             eEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcc
Confidence            4444 567999999999999999999999987543

>d2naca1 c.2.1.4 (A:148-335) Formate dehydrogenase {Pseudomonas sp., strain 101 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Formate dehydrogenase
species: Pseudomonas sp., strain 101 [TaxId: 306]

Probab=91.89  E-value=0.13  Score=37.80  Aligned_cols=60  Identities=23%  Similarity=0.171  Sum_probs=38.6

Q ss_pred             EEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHH-------HHHhhCCCCceEEEEecCCC
Q 025509            2 DIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKE-------TIVKEIPSAKVDAMELDLSS   62 (251)
Q Consensus         2 ~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~-------~~~~~~~~~~v~~~~~D~~~   62 (251)
                      ++.|.| -|.||+++++.|...|++|+..++..........       .+.+.....++..+.+.+++
T Consensus        46 ~vgiiG-~G~IG~~va~~l~~fg~~v~~~d~~~~~~~~~~~~~~~~~~~l~~~l~~sD~v~~~~plt~  112 (188)
T d2naca1          46 HVGTVA-AGRIGLAVLRRLAPFDVHLHYTDRHRLPESVEKELNLTWHATREDMYPVCDVVTLNCPLHP  112 (188)
T ss_dssp             EEEEEC-CSHHHHHHHHHHGGGTCEEEEECSSCCCHHHHHHHTCEECSSHHHHGGGCSEEEECSCCCT
T ss_pred             ceeecc-ccccchhhhhhhhccCceEEEEeeccccccccccccccccCCHHHHHHhccchhhcccccc
Confidence            456665 6789999999999999999999986433222111       12222234566666666654

>d3lada2 c.3.1.5 (A:159-277) Dihydrolipoamide dehydrogenase {Azotobacter vinelandii [TaxId: 354]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Azotobacter vinelandii [TaxId: 354]

Probab=91.87  E-value=0.14  Score=34.60  Aligned_cols=34  Identities=24%  Similarity=0.138  Sum_probs=28.9

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCch
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIA   35 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~   35 (251)
                      ++++|.| +|.||..+|..|++.|.+|.++.++..
T Consensus        23 ~~i~IiG-~G~ig~E~A~~l~~~G~~Vtiv~~~~~   56 (119)
T d3lada2          23 GKLGVIG-AGVIGLELGSVWARLGAEVTVLEAMDK   56 (119)
T ss_dssp             SEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred             CeEEEEC-CChHHHHHHHHHHHcCCceEEEEeecc
Confidence            4677886 479999999999999999999888653

>d1gesa2 c.3.1.5 (A:147-262) Glutathione reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Escherichia coli [TaxId: 562]

Probab=91.76  E-value=0.13  Score=34.58  Aligned_cols=34  Identities=21%  Similarity=0.127  Sum_probs=28.7

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCch
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIA   35 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~   35 (251)
                      |+++|.| +|.+|.++|..|++.|.+|.++.|.+.
T Consensus        22 ~~vvIiG-gG~ig~E~A~~l~~~G~~Vtlve~~~~   55 (116)
T d1gesa2          22 ERVAVVG-AGYIGVELGGVINGLGAKTHLFEMFDA   55 (116)
T ss_dssp             SEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred             CEEEEEC-CChhhHHHHHHhhccccEEEEEeecch
Confidence            4567765 579999999999999999999998753

>d1ne2a_ c.66.1.32 (A:) Hypothetical protein Ta1320 {Archaeon Thermoplasma acidophilum [TaxId: 2303]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Ta1320-like
domain: Hypothetical protein Ta1320
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

Probab=91.61  E-value=0.41  Score=35.41  Aligned_cols=67  Identities=24%  Similarity=0.191  Sum_probs=46.5

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCC-EEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCC
Q 025509            1 MDIVITGATSGIGTETARVLALRGV-HVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQ   79 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~   79 (251)
                      |+||=.|+++|+   ++..++..|+ +|+.++.++..++.+.+.      -.++.++..|+.+.             .++
T Consensus        50 k~VLDlGcGtG~---l~i~a~~~ga~~V~~vDid~~a~~~ar~N------~~~~~~~~~D~~~l-------------~~~  107 (197)
T d1ne2a_          50 RSVIDAGTGNGI---LACGSYLLGAESVTAFDIDPDAIETAKRN------CGGVNFMVADVSEI-------------SGK  107 (197)
T ss_dssp             SEEEEETCTTCH---HHHHHHHTTBSEEEEEESCHHHHHHHHHH------CTTSEEEECCGGGC-------------CCC
T ss_pred             CEEEEeCCCCcH---HHHHHHHcCCCcccccccCHHHHHHHHHc------cccccEEEEehhhc-------------CCc
Confidence            467888888773   3344666776 799999987665544432      24578899998532             258


Q ss_pred             eeEEEEcCCC
Q 025509           80 LNILINNAGI   89 (251)
Q Consensus        80 id~lv~~ag~   89 (251)
                      +|+||.|..+
T Consensus       108 fD~Vi~NPPf  117 (197)
T d1ne2a_         108 YDTWIMNPPF  117 (197)
T ss_dssp             EEEEEECCCC
T ss_pred             ceEEEeCccc
Confidence            9999999754

>d1q0qa2 c.2.1.3 (A:1-125,A:275-300) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase
species: Escherichia coli [TaxId: 562]

Probab=91.51  E-value=1.5  Score=30.78  Aligned_cols=43  Identities=23%  Similarity=0.258  Sum_probs=30.5

Q ss_pred             CEEEEECCCChhHHHHHHHHHHc--CCEEEEEe--cCchhHHHHHHH
Q 025509            1 MDIVITGATSGIGTETARVLALR--GVHVVMGV--RDIAAGKDVKET   43 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~--G~~Vi~~~--r~~~~~~~~~~~   43 (251)
                      |++.|.|+||.||.....-..+.  .++|+...  +|.+.+.+...+
T Consensus         2 K~I~IlGsTGSIG~~tL~Vi~~~~d~f~v~~Lsa~~N~~~L~~q~~~   48 (151)
T d1q0qa2           2 KQLTILGSTGSIGCSTLDVVRHNPEHFRVVALVAGKNVTRMVEQCLE   48 (151)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHCTTTEEEEEEEESSCHHHHHHHHHH
T ss_pred             CeEEEEcCCcHHHHHHHHHHHhCCCCcEEEEEEecCcHHHHHHHHHH
Confidence            57999999999999999988875  46776544  344444444433

>d1c0pa1 c.4.1.2 (A:999-1193,A:1289-1361) D-aminoacid oxidase, N-terminal domain {Rhodotorula gracilis [TaxId: 5286]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: D-aminoacid oxidase, N-terminal domain
domain: D-aminoacid oxidase, N-terminal domain
species: Rhodotorula gracilis [TaxId: 5286]

Probab=91.34  E-value=0.14  Score=38.60  Aligned_cols=33  Identities=33%  Similarity=0.503  Sum_probs=28.6

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCc
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDI   34 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~   34 (251)
                      |+|+|.|| |-.|.++|.+|+++|++|.++.|..
T Consensus         7 ~kVvVIGa-GiaGl~~A~~L~~~G~~V~vier~~   39 (268)
T d1c0pa1           7 KRVVVLGS-GVIGLSSALILARKGYSVHILARDL   39 (268)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred             CcEEEECc-cHHHHHHHHHHHHCCCCEEEEeCCC
Confidence            46888875 6889999999999999999999863

>d1vkna1 c.2.1.3 (A:1-144,A:308-339) N-acetyl-gamma-glutamyl-phosphate reductase ArgC {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: N-acetyl-gamma-glutamyl-phosphate reductase ArgC
species: Thermotoga maritima [TaxId: 2336]

Probab=91.12  E-value=0.17  Score=36.93  Aligned_cols=32  Identities=25%  Similarity=0.167  Sum_probs=26.1

Q ss_pred             EEEEECCCChhHHHHHHHHHHcCC-EEEEEecC
Q 025509            2 DIVITGATSGIGTETARVLALRGV-HVVMGVRD   33 (251)
Q Consensus         2 ~vlItG~s~gIG~a~a~~l~~~G~-~Vi~~~r~   33 (251)
                      +|-|.||||..|..+++.|+++-. ++..+..+
T Consensus         3 kVaIvGATGyvG~eLirlL~~HP~~ei~~l~s~   35 (176)
T d1vkna1           3 RAGIIGATGYTGLELVRLLKNHPEAKITYLSSR   35 (176)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHCTTEEEEEEECS
T ss_pred             EEEEECCCcHHHHHHHHHHHhCCCceEEEeecc
Confidence            689999999999999999998754 66655443

>d1ygya1 c.2.1.4 (A:99-282) Phosphoglycerate dehydrogenase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Phosphoglycerate dehydrogenase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=91.11  E-value=0.18  Score=36.97  Aligned_cols=35  Identities=23%  Similarity=0.204  Sum_probs=28.8

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchh
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAA   36 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~   36 (251)
                      |++.|.| -|.||+++++.+...|++|+..++....
T Consensus        45 k~vgiiG-~G~IG~~va~~~~~fg~~v~~~d~~~~~   79 (184)
T d1ygya1          45 KTVGVVG-LGRIGQLVAQRIAAFGAYVVAYDPYVSP   79 (184)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHTTTCEEEEECTTSCH
T ss_pred             eeeeecc-ccchhHHHHHHhhhccceEEeecCCCCh
Confidence            3556665 6899999999999999999999887544

>d1a4ia1 c.2.1.7 (A:127-296) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.08  E-value=0.28  Score=35.45  Aligned_cols=36  Identities=17%  Similarity=0.188  Sum_probs=29.3

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchh
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAA   36 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~   36 (251)
                      |+++|.|-|.-+|+-++..|+++|++|.++.+....
T Consensus        40 k~vvVIGrS~iVGrPLa~lL~~~gatVt~~~~~t~~   75 (170)
T d1a4ia1          40 RHAVVVGRSKIVGAPMHDLLLWNNATVTTCHSKTAH   75 (170)
T ss_dssp             CEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTCSS
T ss_pred             ceEEEEecCCccchHHHHHHHhccCceEEEeccccc
Confidence            578889999999999999999888888877765443

>d1ojta2 c.3.1.5 (A:276-400) Dihydrolipoamide dehydrogenase {Neisseria meningitidis [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Neisseria meningitidis [TaxId: 487]

Probab=91.00  E-value=0.22  Score=34.00  Aligned_cols=33  Identities=21%  Similarity=0.133  Sum_probs=28.4

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCc
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDI   34 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~   34 (251)
                      ++++|.| +|.||.++|..|.+.|.+|.++.+.+
T Consensus        27 ~~vvIiG-gG~IG~E~A~~~~~~G~~Vtive~~~   59 (125)
T d1ojta2          27 GKLLIIG-GGIIGLEMGTVYSTLGSRLDVVEMMD   59 (125)
T ss_dssp             SEEEEES-CSHHHHHHHHHHHHHTCEEEEECSSS
T ss_pred             CeEEEEC-CCHHHHHHHHHhhcCCCEEEEEEeec
Confidence            4577776 47999999999999999999998864

>d2cvza2 c.2.1.6 (A:2-157) Hydroxyisobutyrate dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=91.00  E-value=0.67  Score=32.47  Aligned_cols=84  Identities=15%  Similarity=0.085  Sum_probs=53.8

Q ss_pred             EEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCC----CCceEEEEecCCCHHHHHHHHHHHHhcCC
Q 025509            3 IVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIP----SAKVDAMELDLSSLASVRNFASEYNIQHH   78 (251)
Q Consensus         3 vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~----~~~v~~~~~D~~~~~~i~~~~~~~~~~~g   78 (251)
                      |-+.|- |-+|.++|+.|.+.|+.+ ...|+.++..+..++......    -.....+...+.+.+.+....+.+.....
T Consensus         3 Ig~IGl-G~MG~~ma~~L~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~v~~~~~~l~~~~~   80 (156)
T d2cvza2           3 VAFIGL-GAMGYPMAGHLARRFPTL-VWNRTFEKALRHQEEFGSEAVPLERVAEARVIFTCLPTTREVYEVAEALYPYLR   80 (156)
T ss_dssp             EEEECC-STTHHHHHHHHHTTSCEE-EECSSTHHHHHHHHHHCCEECCGGGGGGCSEEEECCSSHHHHHHHHHHHTTTCC
T ss_pred             EEEEeH-HHHHHHHHHHHHhCCCEE-EEeCCHHHHHHHHHHcCCcccccccccceeEEEecccchhhhhhhhcccccccc
Confidence            556665 899999999999888755 577887777666554321100    01233444456677888888887766555


Q ss_pred             CeeEEEEcCC
Q 025509           79 QLNILINNAG   88 (251)
Q Consensus        79 ~id~lv~~ag   88 (251)
                      +-.++|.+.-
T Consensus        81 ~~~~iid~sT   90 (156)
T d2cvza2          81 EGTYWVDATS   90 (156)
T ss_dssp             TTEEEEECSC
T ss_pred             cccccccccc
Confidence            5556665553

>d1i1na_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=90.98  E-value=0.62  Score=34.99  Aligned_cols=78  Identities=17%  Similarity=0.012  Sum_probs=58.5

Q ss_pred             EEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCC----CCceEEEEecCCCHHHHHHHHHHHHhcC
Q 025509            2 DIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIP----SAKVDAMELDLSSLASVRNFASEYNIQH   77 (251)
Q Consensus         2 ~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~----~~~v~~~~~D~~~~~~i~~~~~~~~~~~   77 (251)
                      +||-.|+++|--.++..++.....+|+.++++++-++.+.+.+.+...    -..+.+...|..+.          ....
T Consensus        79 ~VLdiG~GsGy~ta~la~l~~~~g~V~~ie~~~~l~~~a~~~l~~~~~~~~~~~~~~~~~gD~~~~----------~~~~  148 (224)
T d1i1na_          79 KALDVGSGSGILTACFARMVGCTGKVIGIDHIKELVDDSVNNVRKDDPTLLSSGRVQLVVGDGRMG----------YAEE  148 (224)
T ss_dssp             EEEEETCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCTHHHHTSSEEEEESCGGGC----------CGGG
T ss_pred             eEEEecCCCCHHHHHHHHHhCCCceEEEEcCCHHHHHHHHHhccccCcccccccceEEEEeecccc----------cchh
Confidence            799999999988888888887777999999998888887777765422    23577777776421          1122


Q ss_pred             CCeeEEEEcCCC
Q 025509           78 HQLNILINNAGI   89 (251)
Q Consensus        78 g~id~lv~~ag~   89 (251)
                      +++|.++.+++.
T Consensus       149 ~~fD~I~~~~~~  160 (224)
T d1i1na_         149 APYDAIHVGAAA  160 (224)
T ss_dssp             CCEEEEEECSBB
T ss_pred             hhhhhhhhhcch
Confidence            479999999875

>d1dxla2 c.3.1.5 (A:153-275) Dihydrolipoamide dehydrogenase {Garden pea (Pisum sativum) [TaxId: 3888]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Garden pea (Pisum sativum) [TaxId: 3888]

Probab=90.98  E-value=0.12  Score=35.10  Aligned_cols=34  Identities=24%  Similarity=0.228  Sum_probs=28.9

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCch
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIA   35 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~   35 (251)
                      |+++|.| +|.||..+|..|.+.|.+|.++.|++.
T Consensus        26 ~~~viiG-~G~iglE~A~~~~~~G~~Vtvi~~~~~   59 (123)
T d1dxla2          26 KKLVVIG-AGYIGLEMGSVWGRIGSEVTVVEFASE   59 (123)
T ss_dssp             SEEEESC-CSHHHHHHHHHHHHHTCEEEEECSSSS
T ss_pred             CeEEEEc-cchHHHHHHHHHHhcCCeEEEEEEccc
Confidence            4567776 579999999999999999999998754

>d1dlja2 c.2.1.6 (A:1-196) UDP-glucose dehydrogenase (UDPGDH) {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: UDP-glucose dehydrogenase (UDPGDH)
species: Streptococcus pyogenes [TaxId: 1314]

Probab=90.92  E-value=0.16  Score=37.29  Aligned_cols=39  Identities=15%  Similarity=0.154  Sum_probs=31.9

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHH
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVK   41 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~   41 (251)
                      |+|.|.| .|.+|..+|..|+ +|++|+..+-++++.+++.
T Consensus         1 MkI~ViG-lG~vGl~~a~~~a-~g~~V~g~Din~~~v~~l~   39 (196)
T d1dlja2           1 MKIAVAG-SGYVGLSLGVLLS-LQNEVTIVDILPSKVDKIN   39 (196)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHT-TTSEEEEECSCHHHHHHHH
T ss_pred             CEEEEEC-CChhHHHHHHHHH-CCCcEEEEECCHHHHHHHh
Confidence            5678885 8999999998775 6999999999987765543

>d2d59a1 c.2.1.8 (A:4-142) Hypothetical protein PH1109 {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Hypothetical protein PH1109
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=90.90  E-value=1.4  Score=30.38  Aligned_cols=84  Identities=12%  Similarity=0.131  Sum_probs=53.5

Q ss_pred             CEEEEECCC---ChhHHHHHHHHHHcCCEEEEEecCchhHHH--HHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHh
Q 025509            1 MDIVITGAT---SGIGTETARVLALRGVHVVMGVRDIAAGKD--VKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNI   75 (251)
Q Consensus         1 k~vlItG~s---~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~--~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~   75 (251)
                      |+|.|.|+|   +..|..+++.|.+.|++|+.+....+....  ....+.+ .+ ..+..+.. +..++.+..+++++.+
T Consensus        20 ksIAVVGaS~~~~~~g~~v~~~L~~~g~~v~pVnP~~~~i~G~~~~~sl~d-lp-~~iD~v~i-~vp~~~~~~~~~e~~~   96 (139)
T d2d59a1          20 KKIALVGASPKPERDANIVMKYLLEHGYDVYPVNPKYEEVLGRKCYPSVLD-IP-DKIEVVDL-FVKPKLTMEYVEQAIK   96 (139)
T ss_dssp             CEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEECTTCSEETTEECBSSGGG-CS-SCCSEEEE-CSCHHHHHHHHHHHHH
T ss_pred             CeEEEEeecCCCCCchHHHHHHHHHCCCEEEEECCcccccCCCcccccccc-cC-ccceEEEE-EeCHHHHHHHHHHHHH
Confidence            579999999   679999999999999999888654332111  1111111 11 12322221 2457788888888776


Q ss_pred             cCCCeeEEEEcCCC
Q 025509           76 QHHQLNILINNAGI   89 (251)
Q Consensus        76 ~~g~id~lv~~ag~   89 (251)
                      .  ++..++...|.
T Consensus        97 ~--g~k~v~~~~G~  108 (139)
T d2d59a1          97 K--GAKVVWFQYNT  108 (139)
T ss_dssp             H--TCSEEEECTTC
T ss_pred             h--CCCEEEEeccc
Confidence            5  35677777774

>d1g6q1_ c.66.1.6 (1:) Arginine methyltransferase, HMT1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Arginine methyltransferase
domain: Arginine methyltransferase, HMT1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=90.79  E-value=1.8  Score=34.21  Aligned_cols=74  Identities=19%  Similarity=0.151  Sum_probs=51.2

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCC-EEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCC
Q 025509            1 MDIVITGATSGIGTETARVLALRGV-HVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQ   79 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~   79 (251)
                      |+||-.|++.|+   ++..+++.|+ +|+.++.++ .+..+.+...+......+.++..|+.+.+          ....+
T Consensus        40 ~~VLDlGcGtG~---ls~~aa~~Ga~~V~avd~s~-~~~~a~~~~~~~~~~~~i~~i~~~~~~l~----------~~~~~  105 (328)
T d1g6q1_          40 KIVLDVGCGTGI---LSMFAAKHGAKHVIGVDMSS-IIEMAKELVELNGFSDKITLLRGKLEDVH----------LPFPK  105 (328)
T ss_dssp             CEEEEETCTTSH---HHHHHHHTCCSEEEEEESST-HHHHHHHHHHHTTCTTTEEEEESCTTTSC----------CSSSC
T ss_pred             CEEEEeCCCCCH---HHHHHHHhCCCEEEEEeCCH-HHHHHHHHHHHhCccccceEEEeehhhcc----------Ccccc
Confidence            578999999884   4556678887 788888875 44555555555544667999999987631          11247


Q ss_pred             eeEEEEcCC
Q 025509           80 LNILINNAG   88 (251)
Q Consensus        80 id~lv~~ag   88 (251)
                      +|+++...-
T Consensus       106 ~D~i~se~~  114 (328)
T d1g6q1_         106 VDIIISEWM  114 (328)
T ss_dssp             EEEEEECCC
T ss_pred             eeEEEEEec
Confidence            999987653

>d1leha1 c.2.1.7 (A:135-364) Leucine dehydrogenase {Bacillus sphaericus [TaxId: 1421]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Leucine dehydrogenase
species: Bacillus sphaericus [TaxId: 1421]

Probab=90.39  E-value=0.094  Score=40.08  Aligned_cols=42  Identities=12%  Similarity=0.178  Sum_probs=33.9

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHH
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKET   43 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~   43 (251)
                      |+|+|- |-|.+|..+|+.|.+.|++|+.++.+..........
T Consensus        40 ~~v~Iq-G~GnVG~~~a~~L~~~Gakvv~~d~~~~~~~~~~~~   81 (230)
T d1leha1          40 LAVSVQ-GLGNVAKALCKKLNTEGAKLVVTDVNKAAVSAAVAE   81 (230)
T ss_dssp             CEEEEE-CCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHH
T ss_pred             CEEEEE-CCCHHHHHHHHHHHHCCCEEEeecccHHHHHHHHHh
Confidence            345555 468999999999999999999999988777666554

>d1seza1 c.3.1.2 (A:13-329,A:442-497) Protoporphyrinogen oxidase {Tobacco (Nicotiana tabacum) [TaxId: 4097]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Protoporphyrinogen oxidase
species: Tobacco (Nicotiana tabacum) [TaxId: 4097]

Probab=90.25  E-value=0.15  Score=39.03  Aligned_cols=33  Identities=21%  Similarity=0.256  Sum_probs=27.9

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCc
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDI   34 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~   34 (251)
                      |+|+|+|| |--|.+.|.+|+++|++|.++.++.
T Consensus         2 KkV~IIGa-G~aGL~aA~~La~~G~~V~vlE~~~   34 (373)
T d1seza1           2 KRVAVIGA-GVSGLAAAYKLKIHGLNVTVFEAEG   34 (373)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHTTSCEEEEECSSS
T ss_pred             CEEEEECc-CHHHHHHHHHHHhCCCCEEEEeCCC
Confidence            78899975 4667888999999999999998764

>d2esra1 c.66.1.46 (A:28-179) Putative methyltransferase SPy1538 {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: YhhF-like
domain: Putative methyltransferase SPy1538
species: Streptococcus pyogenes [TaxId: 1314]

Probab=90.24  E-value=1.6  Score=30.27  Aligned_cols=72  Identities=10%  Similarity=0.179  Sum_probs=47.3

Q ss_pred             EEEECCC-ChhHHHHHHHHHHcCC-EEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            3 IVITGAT-SGIGTETARVLALRGV-HVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         3 vlItG~s-~gIG~a~a~~l~~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      ||=.|++ |.+|.    +.+.+|+ +|+.++.++...+.+.+.++......++.+++.|..+      .++   ...++.
T Consensus        18 vlDl~~GtG~~~i----ea~~rga~~v~~ve~~~~a~~~~~~n~~~~~~~~~~~ii~~D~~~------~l~---~~~~~f   84 (152)
T d2esra1          18 VLDLFAGSGGLAI----EAVSRGMSAAVLVEKNRKAQAIIQDNIIMTKAENRFTLLKMEAER------AID---CLTGRF   84 (152)
T ss_dssp             EEEETCTTCHHHH----HHHHTTCCEEEEECCCHHHHHHHHHHHHTTTCGGGEEEECSCHHH------HHH---HBCSCE
T ss_pred             EEEcCCccCHHHH----HHHHhCcceeeeehhchhhhhhhhhhhhhcccccchhhhcccccc------ccc---cccccc
Confidence            3334444 55555    3456787 8999999988877777777654434568999888532      222   233579


Q ss_pred             eEEEEcC
Q 025509           81 NILINNA   87 (251)
Q Consensus        81 d~lv~~a   87 (251)
                      |+++.+.
T Consensus        85 DiIf~DP   91 (152)
T d2esra1          85 DLVFLDP   91 (152)
T ss_dssp             EEEEECC
T ss_pred             ceeEech
Confidence            9998865

>d2i76a2 c.2.1.6 (A:2-154) Hypothetical protein TM1727 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hypothetical protein TM1727
species: Thermotoga maritima [TaxId: 2336]

Probab=90.03  E-value=0.025  Score=40.14  Aligned_cols=76  Identities=14%  Similarity=0.086  Sum_probs=44.1

Q ss_pred             CCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCC-------CCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            8 ATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIP-------SAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         8 ~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~-------~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      |+|-+|+++++.|.+.+.-+.+.+|++++++++.+.......       ..++.++.+   .++.+.++.+++..   +=
T Consensus         6 G~G~mg~~l~~~L~~~~~~~~v~~R~~~~~~~l~~~~~~~~~~~~~~~~~~DiVil~v---~d~~i~~v~~~l~~---~~   79 (153)
T d2i76a2           6 GTGTLTRFFLECLKDRYEIGYILSRSIDRARNLAEVYGGKAATLEKHPELNGVVFVIV---PDRYIKTVANHLNL---GD   79 (153)
T ss_dssp             SCCHHHHHHHHTTC----CCCEECSSHHHHHHHHHHTCCCCCSSCCCCC---CEEECS---CTTTHHHHHTTTCC---SS
T ss_pred             eCcHHHHHHHHHHHhCCCEEEEEeCChhhhcchhhcccccccchhhhhccCcEEEEec---cchhhhHHHhhhcc---cc
Confidence            467799999998866443346789999998888776432111       223444433   23556666666532   22


Q ss_pred             eEEEEcCCC
Q 025509           81 NILINNAGI   89 (251)
Q Consensus        81 d~lv~~ag~   89 (251)
                      .++|++++.
T Consensus        80 ~ivi~~s~~   88 (153)
T d2i76a2          80 AVLVHCSGF   88 (153)
T ss_dssp             CCEEECCSS
T ss_pred             eeeeecccc
Confidence            477888774

>d1li4a1 c.2.1.4 (A:190-352) S-adenosylhomocystein hydrolase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: S-adenosylhomocystein hydrolase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=89.98  E-value=0.34  Score=34.73  Aligned_cols=39  Identities=21%  Similarity=0.231  Sum_probs=32.0

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHH
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDV   40 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~   40 (251)
                      |+++|.| -|-||+.+|+.+...|++|+++..++.++-+.
T Consensus        25 k~v~V~G-yG~iG~g~A~~~rg~G~~V~v~e~dp~~al~A   63 (163)
T d1li4a1          25 KVAVVAG-YGDVGKGCAQALRGFGARVIITEIDPINALQA   63 (163)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHH
T ss_pred             CEEEEec-cccccHHHHHHHHhCCCeeEeeecccchhHHh
Confidence            5677776 45899999999999999999999987554433

>d2ivda1 c.3.1.2 (A:10-306,A:415-464) Protoporphyrinogen oxidase {Myxococcus xanthus [TaxId: 34]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Protoporphyrinogen oxidase
species: Myxococcus xanthus [TaxId: 34]

Probab=89.97  E-value=0.12  Score=39.52  Aligned_cols=33  Identities=24%  Similarity=0.333  Sum_probs=28.6

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCc
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDI   34 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~   34 (251)
                      |.|+|.|| |--|.+.|.+|+++|++|.+..++.
T Consensus         1 m~V~IIGa-G~aGL~aA~~L~~~G~~V~vlE~~~   33 (347)
T d2ivda1           1 MNVAVVGG-GISGLAVAHHLRSRGTDAVLLESSA   33 (347)
T ss_dssp             CCEEEECC-BHHHHHHHHHHHTTTCCEEEECSSS
T ss_pred             CeEEEECC-CHHHHHHHHHHHhCCCCEEEEecCC
Confidence            56899987 6788999999999999999998764

>d1gtea4 c.4.1.1 (A:184-287,A:441-532) Dihydropyrimidine dehydrogenase, domain 2 {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Dihydropyrimidine dehydrogenase, domain 2
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=89.89  E-value=0.19  Score=36.40  Aligned_cols=35  Identities=20%  Similarity=0.187  Sum_probs=29.0

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCC-EEEEEecCchh
Q 025509            1 MDIVITGATSGIGTETARVLALRGV-HVVMGVRDIAA   36 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~-~Vi~~~r~~~~   36 (251)
                      |+|+|.|| |-.|...|..|+++|+ .|.++.|+...
T Consensus         5 ~kVaIIGa-GpaGl~aA~~l~~~G~~~V~v~E~~~~~   40 (196)
T d1gtea4           5 AKIALLGA-GPASISCASFLARLGYSDITIFEKQEYV   40 (196)
T ss_dssp             CCEEEECC-SHHHHHHHHHHHHTTCCCEEEEESSSSC
T ss_pred             CEEEEECC-hHHHHHHHHHHHHCCCCeEEEEEecCcc
Confidence            57888875 6889999999999999 59898887543

>d1aoga2 c.3.1.5 (A:170-286) Trypanothione reductase {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Trypanothione reductase
species: Trypanosoma cruzi [TaxId: 5693]

Probab=89.82  E-value=0.19  Score=33.70  Aligned_cols=33  Identities=18%  Similarity=0.172  Sum_probs=25.7

Q ss_pred             CEEEEECCCChhHHHHHHHHHHc---CCEEEEEecCc
Q 025509            1 MDIVITGATSGIGTETARVLALR---GVHVVMGVRDI   34 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~---G~~Vi~~~r~~   34 (251)
                      ++++|.|| |.+|.++|..|.+.   |.+|.++.|.+
T Consensus        21 ~~v~ivGg-G~ig~E~A~~l~~l~~~~~~Vtli~~~~   56 (117)
T d1aoga2          21 RRVLTVGG-GFISVEFAGIFNAYKPKDGQVTLCYRGE   56 (117)
T ss_dssp             SEEEEECS-SHHHHHHHHHHHHHCCTTCEEEEEESSS
T ss_pred             CeEEEECC-cHHHHHHHHHhhhcccCCcEEEEEeccc
Confidence            46788887 89999999777654   55799888864

>d2iida1 c.3.1.2 (A:4-319,A:433-486) L-aminoacid oxidase {Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: L-aminoacid oxidase
species: Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]

Probab=89.69  E-value=0.14  Score=40.10  Aligned_cols=33  Identities=33%  Similarity=0.267  Sum_probs=28.2

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCc
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDI   34 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~   34 (251)
                      |+|+|+||+ --|.+.|.+|+++|++|.+..+++
T Consensus        31 kkV~IIGaG-~aGLsaA~~L~~~G~~V~vlE~~~   63 (370)
T d2iida1          31 KHVVIVGAG-MAGLSAAYVLAGAGHQVTVLEASE   63 (370)
T ss_dssp             CEEEEECCB-HHHHHHHHHHHHHTCEEEEECSSS
T ss_pred             CeEEEECCC-HHHHHHHHHHHHCCCCEEEEeCCC
Confidence            578999865 568999999999999999998865

>d1ps9a3 c.4.1.1 (A:331-465,A:628-671) 2,4-dienoyl-CoA reductase, middle domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: 2,4-dienoyl-CoA reductase, middle domain
species: Escherichia coli [TaxId: 562]

Probab=89.53  E-value=0.25  Score=36.06  Aligned_cols=34  Identities=24%  Similarity=0.211  Sum_probs=29.4

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCch
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIA   35 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~   35 (251)
                      |+|+|.|| |--|.+.|..|+++|++|.+..++..
T Consensus        44 k~V~IIGa-GPAGL~AA~~la~~G~~Vtl~E~~~~   77 (179)
T d1ps9a3          44 KNLAVVGA-GPAGLAFAINAAARGHQVTLFDAHSE   77 (179)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHTTTCEEEEEESSSS
T ss_pred             cEEEEECc-cHHHHHHHHHHHhhccceEEEeccCc
Confidence            57889975 57889999999999999999998754

>d1u0sy_ c.23.1.1 (Y:) CheY protein {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: CheY-like
family: CheY-related
domain: CheY protein
species: Thermotoga maritima [TaxId: 2336]

Probab=89.50  E-value=1.9  Score=28.47  Aligned_cols=79  Identities=11%  Similarity=0.104  Sum_probs=52.0

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCC--CHHHHHHHHHHHHhcCC
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLS--SLASVRNFASEYNIQHH   78 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~--~~~~i~~~~~~~~~~~g   78 (251)
                      |+|||.=-..-+...+...|.+.|++|+..+.+...+   .+.+.+.  .  ..++.+|+.  +.+ --++++++++...
T Consensus         2 krILivDD~~~~~~~l~~~L~~~g~~v~~~a~~~~~a---l~~~~~~--~--~dliilD~~mp~~~-G~e~~~~ir~~~~   73 (118)
T d1u0sy_           2 KRVLIVDDAAFMRMMLKDIITKAGYEVAGEATNGREA---VEKYKEL--K--PDIVTMDITMPEMN-GIDAIKEIMKIDP   73 (118)
T ss_dssp             CEEEEECSCHHHHHHHHHHHHHTTCEEEEEESSHHHH---HHHHHHH--C--CSEEEEECSCGGGC-HHHHHHHHHHHCT
T ss_pred             CEEEEEeCCHHHHHHHHHHHHHcCCceEEEECCHHHH---HHHHHhc--c--CCEEEEecCCCCCC-HHHHHHHHHHhCC
Confidence            6788988888899999999999999998766654433   3334443  2  334445554  332 3345666666666


Q ss_pred             CeeEEEEcC
Q 025509           79 QLNILINNA   87 (251)
Q Consensus        79 ~id~lv~~a   87 (251)
                      .+-+++..+
T Consensus        74 ~~pvi~ls~   82 (118)
T d1u0sy_          74 NAKIIVCSA   82 (118)
T ss_dssp             TCCEEEEEC
T ss_pred             CCcEEEEEc
Confidence            777777764

>d2bcgg1 c.3.1.3 (G:5-301) Guanine nucleotide dissociation inhibitor, GDI {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: GDI-like N domain
domain: Guanine nucleotide dissociation inhibitor, GDI
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=89.43  E-value=0.18  Score=37.30  Aligned_cols=31  Identities=16%  Similarity=0.189  Sum_probs=26.8

Q ss_pred             EEEECCCChhHHHHHHHHHHcCCEEEEEecCc
Q 025509            3 IVITGATSGIGTETARVLALRGVHVVMGVRDI   34 (251)
Q Consensus         3 vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~   34 (251)
                      |+|.| +|--|...|.+|+++|++|.++.++.
T Consensus         8 viViG-aG~~Gl~~A~~La~~G~~V~vlE~~~   38 (297)
T d2bcgg1           8 VIVLG-TGITECILSGLLSVDGKKVLHIDKQD   38 (297)
T ss_dssp             EEEEC-CSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred             EEEEC-cCHHHHHHHHHHHHCCCCEEEEcCCC
Confidence            57776 67789999999999999999998864

>d1dusa_ c.66.1.4 (A:) Hypothetical protein MJ0882 {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Hypothetical protein MJ0882
domain: Hypothetical protein MJ0882
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=89.27  E-value=1.8  Score=31.18  Aligned_cols=74  Identities=24%  Similarity=0.177  Sum_probs=51.5

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhh-CCCCceEEEEecCCCHHHHHHHHHHHHhcCCC
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKE-IPSAKVDAMELDLSSLASVRNFASEYNIQHHQ   79 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~-~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~   79 (251)
                      ++||=.|++.|   .++..+++.+.+|++++.++...+.+.+.+... .....+.++..|+.+.  +.         -+.
T Consensus        54 ~~VLDiGcG~G---~~~~~la~~~~~v~~iD~s~~~i~~a~~n~~~~~l~~~~i~~~~~d~~~~--~~---------~~~  119 (194)
T d1dusa_          54 DDILDLGCGYG---VIGIALADEVKSTTMADINRRAIKLAKENIKLNNLDNYDIRVVHSDLYEN--VK---------DRK  119 (194)
T ss_dssp             CEEEEETCTTS---HHHHHHGGGSSEEEEEESCHHHHHHHHHHHHHTTCTTSCEEEEECSTTTT--CT---------TSC
T ss_pred             CeEEEEeecCC---hhHHHHHhhccccceeeeccccchhHHHHHHHhCCccceEEEEEcchhhh--hc---------cCC
Confidence            35777787766   334556677789999999988777777666543 3344688899998542  11         147


Q ss_pred             eeEEEEcCC
Q 025509           80 LNILINNAG   88 (251)
Q Consensus        80 id~lv~~ag   88 (251)
                      +|+++.|..
T Consensus       120 fD~Ii~~~p  128 (194)
T d1dusa_         120 YNKIITNPP  128 (194)
T ss_dssp             EEEEEECCC
T ss_pred             ceEEEEccc
Confidence            999998864

>d3bula2 c.23.6.1 (A:741-896) Methionine synthase, C-terminal domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: Cobalamin (vitamin B12)-binding domain
family: Cobalamin (vitamin B12)-binding domain
domain: Methionine synthase, C-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=89.12  E-value=2.1  Score=30.09  Aligned_cols=77  Identities=19%  Similarity=0.178  Sum_probs=55.1

Q ss_pred             CChhHHHHHHHHHH-cCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCC-CHHHHHHHHHHHHhcCCCeeEEEEc
Q 025509            9 TSGIGTETARVLAL-RGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLS-SLASVRNFASEYNIQHHQLNILINN   86 (251)
Q Consensus         9 s~gIG~a~a~~l~~-~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~-~~~~i~~~~~~~~~~~g~id~lv~~   86 (251)
                      .-.||+.++..+++ .||+|+-.+.+. ..+++.+...+.  +..+..+.+=++ ....+.++++.+.+...++-++|-.
T Consensus        18 ~HdiG~~iv~~~l~~~G~~Vi~LG~~~-p~e~~~~~~~~~--~~d~i~lS~l~~~~~~~~~~~~~~l~~~g~~~~vivGG   94 (156)
T d3bula2          18 VHDIGKNIVGVVLQCNNYEIVDLGVMV-PAEKILRTAKEV--NADLIGLSGLITPSLDEMVNVAKEMERQGFTIPLLIGG   94 (156)
T ss_dssp             CCCHHHHHHHHHHHTTTCEEEECCSSB-CHHHHHHHHHHH--TCSEEEEECCSTHHHHHHHHHHHHHHHTTCCSCEEEES
T ss_pred             hhhHHHHHHHHHHHHCCCEEEECCCCC-CHHHHHHHHHhh--CCCEEEEecccccchHHHHHHHHHHHhccccceEEEec
Confidence            36799999999886 599999888775 456666666665  567888876555 5667788888888775555555444


Q ss_pred             CC
Q 025509           87 AG   88 (251)
Q Consensus        87 ag   88 (251)
                      ++
T Consensus        95 ~~   96 (156)
T d3bula2          95 AT   96 (156)
T ss_dssp             TT
T ss_pred             cc
Confidence            43

>d1vbfa_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Sulfolobus tokodaii [TaxId: 111955]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Sulfolobus tokodaii [TaxId: 111955]

Probab=88.86  E-value=0.75  Score=34.61  Aligned_cols=72  Identities=11%  Similarity=-0.077  Sum_probs=49.7

Q ss_pred             EEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCee
Q 025509            2 DIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQLN   81 (251)
Q Consensus         2 ~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~id   81 (251)
                      +||-.|+++|--.++   |++.+.+|+.+.+++...+.+.+.+. .  ..++.++..|..+-          ....+++|
T Consensus        73 ~VLdIG~GsGy~ta~---La~l~~~V~aiE~~~~~~~~A~~~~~-~--~~nv~~~~~d~~~g----------~~~~~pfD  136 (224)
T d1vbfa_          73 KVLEIGTGIGYYTAL---IAEIVDKVVSVEINEKMYNYASKLLS-Y--YNNIKLILGDGTLG----------YEEEKPYD  136 (224)
T ss_dssp             EEEEECCTTSHHHHH---HHHHSSEEEEEESCHHHHHHHHHHHT-T--CSSEEEEESCGGGC----------CGGGCCEE
T ss_pred             eEEEecCCCCHHHHH---HHHHhcccccccccHHHHHHHHHHHh-c--ccccccccCchhhc----------chhhhhHH
Confidence            689999998865554   45556799999998876666554433 2  35788888887531          11235899


Q ss_pred             EEEEcCCC
Q 025509           82 ILINNAGI   89 (251)
Q Consensus        82 ~lv~~ag~   89 (251)
                      .++.+++.
T Consensus       137 ~Iiv~~a~  144 (224)
T d1vbfa_         137 RVVVWATA  144 (224)
T ss_dssp             EEEESSBB
T ss_pred             HHHhhcch
Confidence            99998874

>d1ihua2 c.37.1.10 (A:308-586) Arsenite-translocating ATPase ArsA {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Arsenite-translocating ATPase ArsA
species: Escherichia coli [TaxId: 562]

Probab=88.73  E-value=0.18  Score=39.04  Aligned_cols=34  Identities=29%  Similarity=0.365  Sum_probs=29.5

Q ss_pred             EEEEECCCChhHHHH-----HHHHHHcCCEEEEEecCch
Q 025509            2 DIVITGATSGIGTET-----ARVLALRGVHVVMGVRDIA   35 (251)
Q Consensus         2 ~vlItG~s~gIG~a~-----a~~l~~~G~~Vi~~~r~~~   35 (251)
                      +|+|+.|=||+|+..     |..|+++|++|.+++-++.
T Consensus        21 ~iii~sGKGGVGKTT~a~nLA~~lA~~G~rVllvD~Dp~   59 (279)
T d1ihua2          21 GLIMLMGKGGVGKTTMAAAIAVRLADMGFDVHLTTSDPA   59 (279)
T ss_dssp             EEEEEECSTTSSHHHHHHHHHHHHHHTTCCEEEEESCCC
T ss_pred             EEEEEECCCCCCHHHHHHHHHHHHHHCCCcEEEEeCCCC
Confidence            577888899999976     7889999999999999865

>d1hyqa_ c.37.1.10 (A:) Cell division regulator MinD {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Cell division regulator MinD
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=88.42  E-value=0.15  Score=38.10  Aligned_cols=34  Identities=26%  Similarity=0.322  Sum_probs=28.6

Q ss_pred             CEEEEECCCChhHHH-----HHHHHHHcCCEEEEEecCc
Q 025509            1 MDIVITGATSGIGTE-----TARVLALRGVHVVMGVRDI   34 (251)
Q Consensus         1 k~vlItG~s~gIG~a-----~a~~l~~~G~~Vi~~~r~~   34 (251)
                      |+|.|+++-||.|+.     +|..|++.|.+|.+++-+.
T Consensus         2 kvIav~s~KGGvGKTtia~nlA~~la~~g~~VlliD~D~   40 (232)
T d1hyqa_           2 RTITVASGKGGTGKTTITANLGVALAQLGHDVTIVDADI   40 (232)
T ss_dssp             EEEEEEESSSCSCHHHHHHHHHHHHHHTTCCEEEEECCC
T ss_pred             EEEEEECCCCCChHHHHHHHHHHHHHhCCCCEEEEeCCC
Confidence            578999999999974     5677888999999998764

>d1qp8a1 c.2.1.4 (A:83-263) Putative formate dehydrogenase {Archaeon Pyrobaculum aerophilum [TaxId: 13773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Putative formate dehydrogenase
species: Archaeon Pyrobaculum aerophilum [TaxId: 13773]

Probab=88.35  E-value=0.34  Score=35.31  Aligned_cols=34  Identities=26%  Similarity=0.316  Sum_probs=29.4

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCch
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIA   35 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~   35 (251)
                      |++.|.|.+. ||+.+++.+...|++|+..+|++.
T Consensus        43 k~vgIiG~G~-IG~~va~~l~~~g~~v~~~d~~~~   76 (181)
T d1qp8a1          43 EKVAVLGLGE-IGTRVGKILAALGAQVRGFSRTPK   76 (181)
T ss_dssp             CEEEEESCST-HHHHHHHHHHHTTCEEEEECSSCC
T ss_pred             ceEEEecccc-ccccceeeeecccccccccccccc
Confidence            5788888654 999999999999999999998753

>d2hjsa1 c.2.1.3 (A:3-129,A:320-336) Usg-1 protein homolog PA3116 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Usg-1 protein homolog PA3116
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=88.34  E-value=0.33  Score=33.96  Aligned_cols=34  Identities=18%  Similarity=0.338  Sum_probs=26.8

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCC---EEEEEecCc
Q 025509            1 MDIVITGATSGIGTETARVLALRGV---HVVMGVRDI   34 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~---~Vi~~~r~~   34 (251)
                      ++|.|.||||..|..+++.|.++++   ++..++.+.
T Consensus         3 mnVaIvGATGyvG~eli~lL~~~~hP~~~l~~~~s~~   39 (144)
T d2hjsa1           3 LNVAVVGATGSVGEALVGLLDERDFPLHRLHLLASAE   39 (144)
T ss_dssp             CCEEEETTTSHHHHHHHHHHHHTTCCCSCEEEEECTT
T ss_pred             CEEEEECCCCHHHHHHHHHHHhcCCCceEEEEEeecc
Confidence            4689999999999999999987653   666655543

>d1q1ra2 c.3.1.5 (A:115-247) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Putidaredoxin reductase
species: Pseudomonas putida [TaxId: 303]

Probab=88.19  E-value=0.4  Score=32.89  Aligned_cols=34  Identities=24%  Similarity=0.228  Sum_probs=29.0

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCch
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIA   35 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~   35 (251)
                      |+++|.| +|.+|.++|..|++.|.+|.++.+.+.
T Consensus        36 k~v~VIG-gG~iG~E~A~~l~~~g~~Vtvie~~~~   69 (133)
T d1q1ra2          36 NRLVVIG-GGYIGLEVAATAIKANMHVTLLDTAAR   69 (133)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred             CEEEEEC-CchHHHHHHHHHHhhCcceeeeeeccc
Confidence            4677775 579999999999999999999998754

>d1r0ka2 c.2.1.3 (A:3-126,A:265-290) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Zymomonas mobilis [TaxId: 542]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase
species: Zymomonas mobilis [TaxId: 542]

Probab=87.67  E-value=0.61  Score=32.84  Aligned_cols=32  Identities=22%  Similarity=0.310  Sum_probs=26.1

Q ss_pred             CEEEEECCCChhHHHHHHHHHHc--CCEEEEEec
Q 025509            1 MDIVITGATSGIGTETARVLALR--GVHVVMGVR   32 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~--G~~Vi~~~r   32 (251)
                      |++.|.|+||.||.....-+.+.  .++|+..+-
T Consensus         3 K~I~IlGsTGSIG~~tL~Vi~~~~d~f~v~~lsa   36 (150)
T d1r0ka2           3 RTVTVLGATGSIGHSTLDLIERNLDRYQVIALTA   36 (150)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHTGGGEEEEEEEE
T ss_pred             cEEEEECCCcHHHHHHHHHHHcCCCCcEEEEEEe
Confidence            57999999999999999988764  578765543

>d2voua1 c.3.1.2 (A:2-163,A:292-394) Dihydroxypyridine hydroxylase DhpH {Arthrobacter nicotinovorans [TaxId: 29320]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Dihydroxypyridine hydroxylase DhpH
species: Arthrobacter nicotinovorans [TaxId: 29320]

Probab=87.66  E-value=0.34  Score=36.62  Aligned_cols=33  Identities=30%  Similarity=0.229  Sum_probs=27.7

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCc
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDI   34 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~   34 (251)
                      ++|+|.|| |--|..+|..|+++|++|++..|+.
T Consensus         5 ~kV~IiGa-G~aGl~~A~~L~~~G~~v~v~Er~~   37 (265)
T d2voua1           5 DRIAVVGG-SISGLTAALMLRDAGVDVDVYERSP   37 (265)
T ss_dssp             SEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             CcEEEECc-CHHHHHHHHHHHHCCCCEEEEeCCC
Confidence            46888876 4678888889999999999999864

>d1sc6a1 c.2.1.4 (A:108-295) Phosphoglycerate dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Phosphoglycerate dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=87.53  E-value=1.6  Score=31.63  Aligned_cols=34  Identities=18%  Similarity=0.077  Sum_probs=28.2

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCch
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIA   35 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~   35 (251)
                      +++.|. |-|.||+++|+.+...|++|+..++...
T Consensus        45 ~~vgii-G~G~IG~~va~~l~~fg~~v~~~d~~~~   78 (188)
T d1sc6a1          45 KKLGII-GYGHIGTQLGILAESLGMYVYFYDIENK   78 (188)
T ss_dssp             CEEEEE-CCSHHHHHHHHHHHHTTCEEEEECSSCC
T ss_pred             eEEEEe-ecccchhhhhhhcccccceEeecccccc
Confidence            356666 5789999999999999999999987643

>d1yb2a1 c.66.1.13 (A:6-255) Hypothetical protein Ta0852 {Thermoplasma acidophilum [TaxId: 2303]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: tRNA(1-methyladenosine) methyltransferase-like
domain: Hypothetical protein Ta0852
species: Thermoplasma acidophilum [TaxId: 2303]

Probab=87.42  E-value=2.3  Score=32.35  Aligned_cols=74  Identities=16%  Similarity=0.189  Sum_probs=53.6

Q ss_pred             EEEEECCCCh-hHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            2 DIVITGATSG-IGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         2 ~vlItG~s~g-IG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      +||=.|+++| +..++|+.+... .+|+.++++++.++.+.+.+.+.....++.+...|+.+.         +  ....+
T Consensus        88 rVLEiG~GsG~lt~~la~~v~~~-g~V~~vD~~e~~~~~A~~n~~~~~~~~nv~~~~~Di~~~---------~--~~~~f  155 (250)
T d1yb2a1          88 DILEVGVGSGNMSSYILYALNGK-GTLTVVERDEDNLKKAMDNLSEFYDIGNVRTSRSDIADF---------I--SDQMY  155 (250)
T ss_dssp             EEEEECCTTSHHHHHHHHHHTTS-SEEEEECSCHHHHHHHHHHHHTTSCCTTEEEECSCTTTC---------C--CSCCE
T ss_pred             EEEEeeeeCcHHHHHHHHHhCCC-cEEEEEECCHHHHHHHHHHHHHhcCCCceEEEEeeeecc---------c--cccee
Confidence            5777787755 456666665444 499999999988888888887654456799999998752         1  12479


Q ss_pred             eEEEEcC
Q 025509           81 NILINNA   87 (251)
Q Consensus        81 d~lv~~a   87 (251)
                      |.++.+.
T Consensus       156 D~V~ld~  162 (250)
T d1yb2a1         156 DAVIADI  162 (250)
T ss_dssp             EEEEECC
T ss_pred             eeeeecC
Confidence            9998764

>d1f0ka_ c.87.1.2 (A:) Peptidoglycan biosynthesis glycosyltransferase MurG {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Peptidoglycan biosynthesis glycosyltransferase MurG
domain: Peptidoglycan biosynthesis glycosyltransferase MurG
species: Escherichia coli [TaxId: 562]

Probab=87.28  E-value=0.44  Score=37.38  Aligned_cols=34  Identities=18%  Similarity=0.144  Sum_probs=25.0

Q ss_pred             CEEEEECCCCh-h---HHHHHHHHHHcCCEEEEEecCc
Q 025509            1 MDIVITGATSG-I---GTETARVLALRGVHVVMGVRDI   34 (251)
Q Consensus         1 k~vlItG~s~g-I---G~a~a~~l~~~G~~Vi~~~r~~   34 (251)
                      |+|||++|++| =   ..+++++|.++|++|.+++...
T Consensus         1 kkili~~~GtGGHv~~a~al~~~L~~~G~eV~~i~~~~   38 (351)
T d1f0ka_           1 KRLMVMAGGTGGHVFPGLAVAHHLMAQGWQVRWLGTAD   38 (351)
T ss_dssp             CEEEEECCSSHHHHHHHHHHHHHHHTTTCEEEEEECTT
T ss_pred             CEEEEEcCCcHHHHHHHHHHHHHHHhCCCEEEEEEeCC
Confidence            67788776544 2   3578999999999998877543

>d1susa1 c.66.1.1 (A:21-247) Caffeoyl-CoA O-methyltransferase {Alfalfa (Medicago sativa) [TaxId: 3879]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: COMT-like
domain: Caffeoyl-CoA O-methyltransferase
species: Alfalfa (Medicago sativa) [TaxId: 3879]

Probab=87.10  E-value=2.3  Score=31.82  Aligned_cols=85  Identities=12%  Similarity=0.048  Sum_probs=57.1

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      |+||=+|...|......-+-...+.+|+.+..++...+.+.+.+.+.....++.++..|.  .+.+.++... ....+++
T Consensus        61 k~iLEiGT~~GyStl~la~al~~~g~v~tie~~~~~~~~A~~~~~~~g~~~~i~~~~g~a--~~~L~~l~~~-~~~~~~f  137 (227)
T d1susa1          61 KNTMEIGVYTGYSLLATALAIPEDGKILAMDINKENYELGLPVIKKAGVDHKIDFREGPA--LPVLDEMIKD-EKNHGSY  137 (227)
T ss_dssp             CEEEEECCGGGHHHHHHHHHSCTTCEEEEEESCCHHHHHHHHHHHHTTCGGGEEEEESCH--HHHHHHHHHC-GGGTTCB
T ss_pred             CcEEEecchhhhhHHHHHhhCCCCcEEEEEeccchhHHHHHHHHHHhccccceeeeehHH--HHHHHHHHhc-cccCCce
Confidence            568888877665544433223345699999999988888877777765556788888776  3445554432 2234689


Q ss_pred             eEEEEcCC
Q 025509           81 NILINNAG   88 (251)
Q Consensus        81 d~lv~~ag   88 (251)
                      |.++..|.
T Consensus       138 D~iFiDa~  145 (227)
T d1susa1         138 DFIFVDAD  145 (227)
T ss_dssp             SEEEECSC
T ss_pred             eEEEeccc
Confidence            99998874

>d1a9xa3 c.30.1.1 (A:1-127) Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains
species: Escherichia coli [TaxId: 562]

Probab=86.89  E-value=0.73  Score=31.41  Aligned_cols=74  Identities=18%  Similarity=0.190  Sum_probs=49.8

Q ss_pred             CEEEEECCC----------ChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHH
Q 025509            1 MDIVITGAT----------SGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFA   70 (251)
Q Consensus         1 k~vlItG~s----------~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~   70 (251)
                      |.|||.|++          ..-+.+.+++|.+.|++++++..|+.....-.+ +     ..++.+.+  + ..+.+.+++
T Consensus         8 kkvlilGsGp~~IGq~~EfDy~~~~a~~alke~g~~~iliN~NP~TVstd~d-~-----aD~lYfeP--l-t~e~v~~Ii   78 (127)
T d1a9xa3           8 KSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVINVNSNPATIMTDPE-M-----ADATYIEP--I-HWEVVRKII   78 (127)
T ss_dssp             CEEEEECCCSCBTTBCTHHHHHHHHHHHHHHHHTCEEEEECSCTTCGGGCGG-G-----SSEEECSC--C-CHHHHHHHH
T ss_pred             CEEEEECCCcCcccccchhHHHHHHHHHHHHHcCCeEEEecCchHhhhcChh-h-----cceeeeec--C-CHHHHHHHH
Confidence            578999985          235678889999999999999998765322111 0     12222222  2 367777777


Q ss_pred             HHHHhcCCCeeEEEEcCC
Q 025509           71 SEYNIQHHQLNILINNAG   88 (251)
Q Consensus        71 ~~~~~~~g~id~lv~~ag   88 (251)
                      +.-     ++|.++...|
T Consensus        79 ~~E-----~pd~il~~~G   91 (127)
T d1a9xa3          79 EKE-----RPDAVLPTMG   91 (127)
T ss_dssp             HHH-----CCSEEECSSS
T ss_pred             HHh-----CcCCeEEEee
Confidence            754     7888887777

>d2cl5a1 c.66.1.1 (A:3-216) Catechol O-methyltransferase, COMT {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: COMT-like
domain: Catechol O-methyltransferase, COMT
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=86.84  E-value=1.2  Score=33.13  Aligned_cols=83  Identities=11%  Similarity=0.075  Sum_probs=54.0

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      |+||=+|...|......-.....|.+|+.++.+++..+.+.+.+.......+++++..|..+  .+.++.+..  ..+.+
T Consensus        58 k~ILEiGt~~G~Sti~la~al~~~g~v~sid~~~~~~~~a~~~~~~~gl~~~i~l~~Gd~~e--~l~~l~~~~--~~~~~  133 (214)
T d2cl5a1          58 SLVLELGAYCGYSAVRMARLLQPGARLLTMEMNPDYAAITQQMLNFAGLQDKVTILNGASQD--LIPQLKKKY--DVDTL  133 (214)
T ss_dssp             SEEEEECCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHH--HGGGHHHHS--CCCCE
T ss_pred             CEEEEEccCchhHHHHHHHhCCCccEEEEEeccHHHHHHHHHHHHHcCCCccceeeeccccc--cccchhhcc--ccccc
Confidence            47888998877654333222235679999999988888887777766545678898877642  233322221  22478


Q ss_pred             eEEEEcC
Q 025509           81 NILINNA   87 (251)
Q Consensus        81 d~lv~~a   87 (251)
                      |.++.-+
T Consensus       134 D~ifiD~  140 (214)
T d2cl5a1         134 DMVFLDH  140 (214)
T ss_dssp             EEEEECS
T ss_pred             ceeeecc
Confidence            9887754

>d1djqa3 c.4.1.1 (A:341-489,A:646-729) Trimethylamine dehydrogenase, middle domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Trimethylamine dehydrogenase, middle domain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=86.70  E-value=0.34  Score=36.40  Aligned_cols=34  Identities=32%  Similarity=0.352  Sum_probs=28.5

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCch
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIA   35 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~   35 (251)
                      |+|+|.||+ -.|.+.|.+|+++|++|.++.++..
T Consensus        50 k~VvIIGaG-pAGl~aA~~l~~~G~~v~l~E~~~~   83 (233)
T d1djqa3          50 DSVLIVGAG-PSGSEAARVLMESGYTVHLTDTAEK   83 (233)
T ss_dssp             CEEEEECCS-HHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred             ceEEEEccc-HHHHHHHHHHHHhccceeeEeeccc
Confidence            578899865 6689999999999999999987643

>d1ws6a1 c.66.1.46 (A:15-185) Methyltransferase TTHA0928 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: YhhF-like
domain: Methyltransferase TTHA0928
species: Thermus thermophilus [TaxId: 274]

Probab=86.67  E-value=3.4  Score=29.12  Aligned_cols=63  Identities=16%  Similarity=0.111  Sum_probs=38.5

Q ss_pred             HHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCeeEEEEcCC
Q 025509           18 RVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQLNILINNAG   88 (251)
Q Consensus        18 ~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~id~lv~~ag   88 (251)
                      -+++.+|++|+.++.++...+-+.+.++...  ....+...|.   +..   .........++|+++.+..
T Consensus        57 i~a~~~ga~vv~vD~~~~a~~~~~~N~~~~~--~~~~v~~~~~---d~~---~~~~~~~~~~fD~If~DPP  119 (171)
T d1ws6a1          57 LEAASEGWEAVLVEKDPEAVRLLKENVRRTG--LGARVVALPV---EVF---LPEAKAQGERFTVAFMAPP  119 (171)
T ss_dssp             HHHHHTTCEEEEECCCHHHHHHHHHHHHHHT--CCCEEECSCH---HHH---HHHHHHTTCCEEEEEECCC
T ss_pred             hhhhhccchhhhcccCHHHHhhhhHHHHhhc--cccceeeeeh---hcc---cccccccCCccceeEEccc
Confidence            3456679999999999988887777776542  2223333222   222   2222333457999988753

>d1vl5a_ c.66.1.41 (A:) Hypothetical protein BH2331 {Bacillus halodurans [TaxId: 86665]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: UbiE/COQ5-like
domain: Hypothetical protein BH2331
species: Bacillus halodurans [TaxId: 86665]

Probab=86.63  E-value=1.5  Score=32.15  Aligned_cols=75  Identities=13%  Similarity=0.031  Sum_probs=53.2

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      ++||=.|++.|.-   +..|++.|++|+.++.++.-++.+.+.+.+.. ..++.++..|..+..          -..+.+
T Consensus        17 ~rVLDiGcG~G~~---~~~l~~~~~~v~gvD~s~~~i~~A~~~~~~~~-~~~i~~~~~d~~~l~----------~~~~~f   82 (231)
T d1vl5a_          17 EEVLDVATGGGHV---ANAFAPFVKKVVAFDLTEDILKVARAFIEGNG-HQQVEYVQGDAEQMP----------FTDERF   82 (231)
T ss_dssp             CEEEEETCTTCHH---HHHHGGGSSEEEEEESCHHHHHHHHHHHHHTT-CCSEEEEECCC-CCC----------SCTTCE
T ss_pred             CEEEEecccCcHH---HHHHHHhCCEEEEEECCHHHHhhhhhcccccc-ccccccccccccccc----------cccccc
Confidence            3688889988854   45678889999999999877777665554432 456889999887631          123579


Q ss_pred             eEEEEcCCC
Q 025509           81 NILINNAGI   89 (251)
Q Consensus        81 d~lv~~ag~   89 (251)
                      |+++.+..+
T Consensus        83 D~v~~~~~l   91 (231)
T d1vl5a_          83 HIVTCRIAA   91 (231)
T ss_dssp             EEEEEESCG
T ss_pred             ccccccccc
Confidence            999988764

>d1diha1 c.2.1.3 (A:2-130,A:241-273) Dihydrodipicolinate reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Escherichia coli [TaxId: 562]

Probab=86.33  E-value=1.6  Score=30.92  Aligned_cols=83  Identities=17%  Similarity=0.211  Sum_probs=52.5

Q ss_pred             EEEEECCCChhHHHHHHHHHHc-CCEEE-EEecCchh-H-HHHHH-------------HHHhhCCCCceEEEEecCCCHH
Q 025509            2 DIVITGATSGIGTETARVLALR-GVHVV-MGVRDIAA-G-KDVKE-------------TIVKEIPSAKVDAMELDLSSLA   64 (251)
Q Consensus         2 ~vlItG~s~gIG~a~a~~l~~~-G~~Vi-~~~r~~~~-~-~~~~~-------------~~~~~~~~~~v~~~~~D~~~~~   64 (251)
                      +|.|.|++|-+|+++++...+. ++.++ .++|.... . .+..+             .+.+.  -.... +..|++.++
T Consensus         6 kI~i~Ga~GrMG~~i~~~i~~~~~~~lv~~~~~~~~~~~g~d~~~~~~~~~~~~~~~~~~~~~--~~~~D-ViIDFs~p~   82 (162)
T d1diha1           6 RVAIAGAGGRMGRQLIQAALALEGVQLGAALEREGSSLLGSDAGELAGAGKTGVTVQSSLDAV--KDDFD-VFIDFTRPE   82 (162)
T ss_dssp             EEEETTTTSHHHHHHHHHHHHSTTEECCCEECCTTCTTCSCCTTCSSSSSCCSCCEESCSTTT--TTSCS-EEEECSCHH
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecccchhccchhhhhhccccCCceeeccHHHH--hcccc-eEEEeccHH
Confidence            5899999999999999999875 56654 33342211 0 00000             00000  01223 447999999


Q ss_pred             HHHHHHHHHHhcCCCeeEEEEcCCC
Q 025509           65 SVRNFASEYNIQHHQLNILINNAGI   89 (251)
Q Consensus        65 ~i~~~~~~~~~~~g~id~lv~~ag~   89 (251)
                      ...+.++...+.  ++.+|+-..|+
T Consensus        83 ~~~~~~~~a~~~--~~~~ViGTTG~  105 (162)
T d1diha1          83 GTLNHLAFCRQH--GKGMVIGTTGF  105 (162)
T ss_dssp             HHHHHHHHHHHT--TCEEEECCCCC
T ss_pred             HHHHHHHHHHhc--cceeEEecCCC
Confidence            999988876543  67889888885

>d1r18a_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=86.24  E-value=1.1  Score=33.47  Aligned_cols=79  Identities=16%  Similarity=0.069  Sum_probs=55.7

Q ss_pred             CEEEEECCCChhHHHHHHHHHH-cC----CEEEEEecCchhHHHHHHHHHhh----CCCCceEEEEecCCCHHHHHHHHH
Q 025509            1 MDIVITGATSGIGTETARVLAL-RG----VHVVMGVRDIAAGKDVKETIVKE----IPSAKVDAMELDLSSLASVRNFAS   71 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~-~G----~~Vi~~~r~~~~~~~~~~~~~~~----~~~~~v~~~~~D~~~~~~i~~~~~   71 (251)
                      .+||..|+++|--.++...++. .|    .+|+.+.++++-.+...+.+...    ..-.++.++..|..+         
T Consensus        82 ~~VLeIGtGsGY~ta~la~l~g~~g~~~~~~V~~iE~~~~l~~~a~~~l~~~~~~~~~~~nv~~~~~d~~~---------  152 (223)
T d1r18a_          82 ARILDVGSGSGYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNTDDRSMLDSGQLLIVEGDGRK---------  152 (223)
T ss_dssp             CEEEEESCTTSHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHHHHHHHHHHHHHHHTSEEEEESCGGG---------
T ss_pred             CeEEEecCCCCHHHHHHHHHhhhccCCcccEEEEEecCHHHHHHHHHhhhhcchhhcCccEEEEEeccccc---------
Confidence            3699999999988888888874 34    48999999887666665544321    112468888888753         


Q ss_pred             HHHhcCCCeeEEEEcCCC
Q 025509           72 EYNIQHHQLNILINNAGI   89 (251)
Q Consensus        72 ~~~~~~g~id~lv~~ag~   89 (251)
                       .....+++|.++.+++.
T Consensus       153 -~~~~~~~fD~Iiv~~a~  169 (223)
T d1r18a_         153 -GYPPNAPYNAIHVGAAA  169 (223)
T ss_dssp             -CCGGGCSEEEEEECSCB
T ss_pred             -ccccccceeeEEEEeec
Confidence             11233589999999985

>d1iuka_ c.2.1.8 (A:) Hypothetical protein TT1466 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Hypothetical protein TT1466
species: Thermus thermophilus [TaxId: 274]

Probab=86.20  E-value=2.5  Score=28.79  Aligned_cols=84  Identities=15%  Similarity=0.193  Sum_probs=49.8

Q ss_pred             CEEEEECCC---ChhHHHHHHHHHHcCCEEEEEecCchh--HH--HHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHH
Q 025509            1 MDIVITGAT---SGIGTETARVLALRGVHVVMGVRDIAA--GK--DVKETIVKEIPSAKVDAMELDLSSLASVRNFASEY   73 (251)
Q Consensus         1 k~vlItG~s---~gIG~a~a~~l~~~G~~Vi~~~r~~~~--~~--~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~   73 (251)
                      |+|.|.|+|   +-.|..+.+.|.+.|++++.+.-+...  ..  .....+.+ . ...+..+.+ +..++.+..+++++
T Consensus        14 ksIAVVGaS~~~~k~g~~v~~~L~~~g~~~~~v~~~~~~~~i~g~~~~~~l~~-i-~~~iD~v~v-~~p~~~v~~~v~~~   90 (136)
T d1iuka_          14 KTIAVLGAHKDPSRPAHYVPRYLREQGYRVLPVNPRFQGEELFGEEAVASLLD-L-KEPVDILDV-FRPPSALMDHLPEV   90 (136)
T ss_dssp             CEEEEETCCSSTTSHHHHHHHHHHHTTCEEEEECGGGTTSEETTEECBSSGGG-C-CSCCSEEEE-CSCHHHHTTTHHHH
T ss_pred             CeEEEEeecCCCCCchHHHHHHHhcCCCCceEEEeccccceeeceecccchhh-c-cCCCceEEE-eccHHHHHHHHHHH
Confidence            579999999   669999999999999998877654321  00  00000111 1 112222221 23567777777776


Q ss_pred             HhcCCCeeEEEEcCCC
Q 025509           74 NIQHHQLNILINNAGI   89 (251)
Q Consensus        74 ~~~~g~id~lv~~ag~   89 (251)
                      .+.  ++..++...|.
T Consensus        91 ~~~--g~k~i~~q~G~  104 (136)
T d1iuka_          91 LAL--RPGLVWLQSGI  104 (136)
T ss_dssp             HHH--CCSCEEECTTC
T ss_pred             Hhh--CCCeEEEecCc
Confidence            654  34556666664

>d1mx3a1 c.2.1.4 (A:126-318) Transcription corepressor CtbP {Human (Homo sapiens), Ctbp1 [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Transcription corepressor CtbP
species: Human (Homo sapiens), Ctbp1 [TaxId: 9606]

Probab=86.07  E-value=0.49  Score=34.78  Aligned_cols=34  Identities=18%  Similarity=0.154  Sum_probs=28.7

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCch
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIA   35 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~   35 (251)
                      |++.|.| -|.||+++|+.+...|++|+..++...
T Consensus        50 ktvgIiG-~G~IG~~va~~l~~fg~~v~~~d~~~~   83 (193)
T d1mx3a1          50 ETLGIIG-LGRVGQAVALRAKAFGFNVLFYDPYLS   83 (193)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHTTTCEEEEECTTSC
T ss_pred             ceEEEec-cccccccceeeeeccccceeeccCccc
Confidence            4677775 579999999999999999999888644

>d1g3qa_ c.37.1.10 (A:) Cell division regulator MinD {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Cell division regulator MinD
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=85.91  E-value=0.32  Score=36.28  Aligned_cols=33  Identities=27%  Similarity=0.262  Sum_probs=27.8

Q ss_pred             CEEEEECCCChhHHH-----HHHHHHHcCCEEEEEecC
Q 025509            1 MDIVITGATSGIGTE-----TARVLALRGVHVVMGVRD   33 (251)
Q Consensus         1 k~vlItG~s~gIG~a-----~a~~l~~~G~~Vi~~~r~   33 (251)
                      |+|.|+|+-||.|+.     +|..|++.|.+|.+++-+
T Consensus         3 ~vIav~~~kGGvGKTtia~nLA~~la~~g~~VlliD~D   40 (237)
T d1g3qa_           3 RIISIVSGKGGTGKTTVTANLSVALGDRGRKVLAVDGD   40 (237)
T ss_dssp             EEEEEECSSTTSSHHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred             eEEEEECCCCCCcHHHHHHHHHHHHHhCCCCEEEEeCC
Confidence            468899999999985     567788899999999865

>d1k0ia1 c.3.1.2 (A:1-173,A:276-394) p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: p-Hydroxybenzoate hydroxylase, PHBH
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=85.83  E-value=0.35  Score=37.31  Aligned_cols=33  Identities=24%  Similarity=0.308  Sum_probs=29.2

Q ss_pred             EEEEECCCChhHHHHHHHHHHcCCEEEEEecCch
Q 025509            2 DIVITGATSGIGTETARVLALRGVHVVMGVRDIA   35 (251)
Q Consensus         2 ~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~   35 (251)
                      .|+|.||+ -.|..+|..|++.|.+|.++.+.+.
T Consensus         4 ~V~IvGaG-p~Gl~~A~~L~~~G~~v~vlE~~~~   36 (292)
T d1k0ia1           4 QVAIIGAG-PSGLLLGQLLHKAGIDNVILERQTP   36 (292)
T ss_dssp             SEEEECCS-HHHHHHHHHHHHHTCCEEEECSSCH
T ss_pred             CEEEECcC-HHHHHHHHHHHHCCCCEEEEeCCCC
Confidence            38899877 8899999999999999999998763

>d1lvla2 c.3.1.5 (A:151-265) Dihydrolipoamide dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=85.63  E-value=0.44  Score=31.66  Aligned_cols=34  Identities=21%  Similarity=0.178  Sum_probs=28.1

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCch
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIA   35 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~   35 (251)
                      |+++|.| +|.+|.++|..|++.|.+|.++.+.+.
T Consensus        22 ~~vvIiG-gG~~G~E~A~~l~~~g~~Vtlve~~~~   55 (115)
T d1lvla2          22 QHLVVVG-GGYIGLELGIAYRKLGAQVSVVEARER   55 (115)
T ss_dssp             SEEEEEC-CSHHHHHHHHHHHHHTCEEEEECSSSS
T ss_pred             CeEEEEC-CCHHHHHHHHHHhhcccceEEEeeecc
Confidence            3566664 679999999999999999999988643

>d1a9xa4 c.30.1.1 (A:556-676) Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains
species: Escherichia coli [TaxId: 562]

Probab=85.54  E-value=2.1  Score=28.74  Aligned_cols=74  Identities=14%  Similarity=0.063  Sum_probs=48.1

Q ss_pred             CEEEEECCCC----------hhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHH
Q 025509            1 MDIVITGATS----------GIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFA   70 (251)
Q Consensus         1 k~vlItG~s~----------gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~   70 (251)
                      |.|||.|++.          .-+.+.+++|.+.|++++++..|+.....-.+ +     ..++.+.  .+ ..+.+.+++
T Consensus         5 kkvlViGsGp~rIGq~~EfDy~~~~a~~aLk~~g~~~IliN~NPeTVstd~d-~-----aD~lYfe--pl-t~e~v~~Ii   75 (121)
T d1a9xa4           5 EKIMVLGGGPNRIGQGIEFDYCCVHASLALREDGYETIMVNCNPETVSTDYD-T-----SDRLYFE--PV-TLEDVLEIV   75 (121)
T ss_dssp             CEEEEECCCSCBTTBCHHHHHHHHHHHHHHHHTTCEEEEECCCTTSSTTSTT-S-----SSEEECC--CC-SHHHHHHHH
T ss_pred             CEEEEECCCcCcccccchhhHHHHHHHHHHHhcCCeEEEEecChhhhhcChh-h-----cCceEEc--cC-CHHHHHHHH
Confidence            5789999862          45678899999999999999998765321100 0     1122222  23 356677666


Q ss_pred             HHHHhcCCCeeEEEEcCC
Q 025509           71 SEYNIQHHQLNILINNAG   88 (251)
Q Consensus        71 ~~~~~~~g~id~lv~~ag   88 (251)
                      +.-     ++|.++...|
T Consensus        76 ~~E-----~p~~ii~~~G   88 (121)
T d1a9xa4          76 RIE-----KPKGVIVQYG   88 (121)
T ss_dssp             HHH-----CCSEEECSSS
T ss_pred             HHh-----CCCEEEeehh
Confidence            653     6788887776

>d1edza1 c.2.1.7 (A:149-319) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=85.24  E-value=0.57  Score=33.76  Aligned_cols=33  Identities=18%  Similarity=0.167  Sum_probs=29.7

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecC
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRD   33 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~   33 (251)
                      |+++|.|-|.=+|+-+|..|+++|+.|.....+
T Consensus        30 K~vvVIGrS~iVG~Pla~lL~~~gaTVt~~~~~   62 (171)
T d1edza1          30 KKCIVINRSEIVGRPLAALLANDGATVYSVDVN   62 (171)
T ss_dssp             CEEEEECCCTTTHHHHHHHHHTTSCEEEEECSS
T ss_pred             CEEEEECCccccHHHHHHHHHHCCCEEEEeccc
Confidence            679999999999999999999999999877654

>d1pj5a2 c.3.1.2 (A:4-219,A:339-427) N,N-dimethylglycine oxidase {Arthrobacter globiformis [TaxId: 1665]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: N,N-dimethylglycine oxidase
species: Arthrobacter globiformis [TaxId: 1665]

Probab=84.99  E-value=0.43  Score=37.05  Aligned_cols=32  Identities=34%  Similarity=0.382  Sum_probs=26.7

Q ss_pred             EEEEECCCChhHHHHHHHHHHcCC-EEEEEecCc
Q 025509            2 DIVITGATSGIGTETARVLALRGV-HVVMGVRDI   34 (251)
Q Consensus         2 ~vlItG~s~gIG~a~a~~l~~~G~-~Vi~~~r~~   34 (251)
                      .|+|.|| |-+|.++|.+|+++|. +|.++.|+.
T Consensus         3 dViIIGa-Gi~G~s~A~~La~~G~~~V~liE~~~   35 (305)
T d1pj5a2           3 RIVIIGA-GIVGTNLADELVTRGWNNITVLDQGP   35 (305)
T ss_dssp             CEEEECC-SHHHHHHHHHHHHTTCCCEEEECSSC
T ss_pred             CEEEECc-CHHHHHHHHHHHHcCCCcEEEEeCCC
Confidence            3778875 5899999999999997 699998863

>d2o57a1 c.66.1.18 (A:16-297) Putative sarcosine dimethylglycine methyltransferase {Red algae (Galdieria sulphuraria) [TaxId: 130081]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Mycolic acid cyclopropane synthase
domain: Putative sarcosine dimethylglycine methyltransferase
species: Red algae (Galdieria sulphuraria) [TaxId: 130081]

Probab=84.93  E-value=2.2  Score=32.61  Aligned_cols=74  Identities=14%  Similarity=0.058  Sum_probs=52.3

Q ss_pred             EEEEECCCChhHHHHHHHHHHc-CCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            2 DIVITGATSGIGTETARVLALR-GVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         2 ~vlItG~s~gIG~a~a~~l~~~-G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      +||=.|++.|.   ++..|+++ |++|+.++-++.-++.+.+...+.....++.++.+|..+..          -..+.+
T Consensus        70 ~vLDiGcG~G~---~~~~la~~~~~~v~gvD~s~~~i~~a~~~~~~~gl~~~v~~~~~d~~~l~----------~~~~sf  136 (282)
T d2o57a1          70 KGLDLGAGYGG---AARFLVRKFGVSIDCLNIAPVQNKRNEEYNNQAGLADNITVKYGSFLEIP----------CEDNSY  136 (282)
T ss_dssp             EEEEETCTTSH---HHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHHTCTTTEEEEECCTTSCS----------SCTTCE
T ss_pred             EEEEeCCCCcH---HHhhhhccCCcEEEEEeccchhhhhhhccccccccccccccccccccccc----------cccccc
Confidence            57778887663   44556554 88999999998877777766666544567999999987531          122579


Q ss_pred             eEEEEcCC
Q 025509           81 NILINNAG   88 (251)
Q Consensus        81 d~lv~~ag   88 (251)
                      |+|+.+-.
T Consensus       137 D~V~~~~~  144 (282)
T d2o57a1         137 DFIWSQDA  144 (282)
T ss_dssp             EEEEEESC
T ss_pred             chhhccch
Confidence            99987654

>d2bi7a1 c.4.1.3 (A:2-247,A:317-384) UDP-galactopyranose mutase, N-terminal domain {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: UDP-galactopyranose mutase, N-terminal domain
domain: UDP-galactopyranose mutase, N-terminal domain
species: Klebsiella pneumoniae [TaxId: 573]

Probab=84.75  E-value=0.57  Score=37.04  Aligned_cols=34  Identities=29%  Similarity=0.231  Sum_probs=27.8

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCch
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIA   35 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~   35 (251)
                      |.|+|.||+ --|..+|.+|+++|++|.++.++..
T Consensus         3 KKI~IIGaG-~sGL~aA~~L~k~G~~V~viEk~~~   36 (314)
T d2bi7a1           3 KKILIVGAG-FSGAVIGRQLAEKGHQVHIIDQRDH   36 (314)
T ss_dssp             CEEEEECCS-HHHHHHHHHHHTTTCEEEEEESSSS
T ss_pred             CEEEEECCc-HHHHHHHHHHHhCCCCEEEEECCCC
Confidence            578888764 5678888999999999999987654

>d2avda1 c.66.1.1 (A:44-262) COMT domain-containing protein 1, COMTD1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: COMT-like
domain: COMT domain-containing protein 1, COMTD1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=84.63  E-value=4.3  Score=30.00  Aligned_cols=83  Identities=13%  Similarity=0.055  Sum_probs=55.6

Q ss_pred             CEEEEECCCChhHHH-HHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCC
Q 025509            1 MDIVITGATSGIGTE-TARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQ   79 (251)
Q Consensus         1 k~vlItG~s~gIG~a-~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~   79 (251)
                      |+||=+|...|.... +|+.+ ..+.+|+.+..++...+.+.+.+.+......+.++..|.  .+.+..++..  ...++
T Consensus        61 k~vLEiGt~~GyStl~~a~al-~~~g~i~tie~~~~~~~~A~~~~~~ag~~~~i~~~~Gda--~e~l~~~~~~--~~~~~  135 (219)
T d2avda1          61 KKALDLGTFTGYSALALALAL-PADGRVVTCEVDAQPPELGRPLWRQAEAEHKIDLRLKPA--LETLDELLAA--GEAGT  135 (219)
T ss_dssp             CEEEEECCTTSHHHHHHHTTS-CTTCEEEEEESCSHHHHHHHHHHHHTTCTTTEEEEESCH--HHHHHHHHHT--TCTTC
T ss_pred             CeEEEEechhhHHHHHHHHhC-CCCceEEEEeechhHHHHHHHHHHhcCccceEEEEEeeh--hhcchhhhhh--cccCC
Confidence            578888887665533 33333 335599999999988888887777765566788888776  3344443332  22357


Q ss_pred             eeEEEEcCC
Q 025509           80 LNILINNAG   88 (251)
Q Consensus        80 id~lv~~ag   88 (251)
                      +|.++..+.
T Consensus       136 fD~ifiD~d  144 (219)
T d2avda1         136 FDVAVVDAD  144 (219)
T ss_dssp             EEEEEECSC
T ss_pred             ccEEEEeCC
Confidence            999988774

>d2b3ta1 c.66.1.30 (A:2-275) N5-glutamine methyltransferase, HemK {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: N5-glutamine methyltransferase, HemK
domain: N5-glutamine methyltransferase, HemK
species: Escherichia coli [TaxId: 562]

Probab=84.55  E-value=1.5  Score=33.96  Aligned_cols=74  Identities=15%  Similarity=0.109  Sum_probs=51.2

Q ss_pred             EEEECC-CChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCee
Q 025509            3 IVITGA-TSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQLN   81 (251)
Q Consensus         3 vlItG~-s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~id   81 (251)
                      +|=.|+ ||-||.+++.++  ...+|+.++.++..++-+.+...... -.++.+++.|+.+.-           ...++|
T Consensus       112 vlDlGtGSG~I~i~la~~~--p~~~v~avDis~~Al~~A~~Na~~~~-~~~v~~~~~d~~~~~-----------~~~~fD  177 (274)
T d2b3ta1         112 ILDLGTGTGAIALALASER--PDCEIIAVDRMPDAVSLAQRNAQHLA-IKNIHILQSDWFSAL-----------AGQQFA  177 (274)
T ss_dssp             EEEETCTTSHHHHHHHHHC--TTSEEEEECSSHHHHHHHHHHHHHHT-CCSEEEECCSTTGGG-----------TTCCEE
T ss_pred             eeeeehhhhHHHHHHHhhC--CcceeeeccchhHHHhHHHHHHHHhC-cccceeeeccccccc-----------CCCcee
Confidence            344444 466777777654  34699999999888777777665542 235899999986431           124899


Q ss_pred             EEEEcCCCC
Q 025509           82 ILINNAGIM   90 (251)
Q Consensus        82 ~lv~~ag~~   90 (251)
                      ++|.|....
T Consensus       178 lIvsNPPYi  186 (274)
T d2b3ta1         178 MIVSNPPYI  186 (274)
T ss_dssp             EEEECCCCB
T ss_pred             EEEecchhh
Confidence            999998754

>d1y81a1 c.2.1.8 (A:6-121) Hypothetical protein PF0725 {Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Hypothetical protein PF0725
species: Pyrococcus furiosus [TaxId: 2261]

Probab=84.47  E-value=0.85  Score=30.44  Aligned_cols=33  Identities=21%  Similarity=0.274  Sum_probs=28.7

Q ss_pred             CEEEEECCC---ChhHHHHHHHHHHcCCEEEEEecC
Q 025509            1 MDIVITGAT---SGIGTETARVLALRGVHVVMGVRD   33 (251)
Q Consensus         1 k~vlItG~s---~gIG~a~a~~l~~~G~~Vi~~~r~   33 (251)
                      |+|.|.|+|   +-.|..+.+.|.+.||+|+.+..+
T Consensus         2 KsIAVvGaS~~~~k~g~~v~~~L~~~g~~V~pVnP~   37 (116)
T d1y81a1           2 RKIALVGASKNPAKYGNIILKDLLSKGFEVLPVNPN   37 (116)
T ss_dssp             CEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEECTT
T ss_pred             cEEEEEcccCCCCCcHHHHHHHHHHCCCEEEEEccc
Confidence            689999999   568999999999999998877544

>d1cp2a_ c.37.1.10 (A:) Nitrogenase iron protein {Clostridium pasteurianum [TaxId: 1501]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Nitrogenase iron protein
species: Clostridium pasteurianum [TaxId: 1501]

Probab=83.95  E-value=0.33  Score=37.30  Aligned_cols=34  Identities=26%  Similarity=0.323  Sum_probs=27.4

Q ss_pred             CEEEEECCCChhHHHH-----HHHHHHcCCEEEEEecCch
Q 025509            1 MDIVITGATSGIGTET-----ARVLALRGVHVVMGVRDIA   35 (251)
Q Consensus         1 k~vlItG~s~gIG~a~-----a~~l~~~G~~Vi~~~r~~~   35 (251)
                      |+|.|+| =||+|+..     |..|+++|++|.+++.++.
T Consensus         2 r~Iai~g-KGGvGKTT~a~nLA~~LA~~G~rVllID~D~q   40 (269)
T d1cp2a_           2 RQVAIYG-KGGIGKSTTTQNLTSGLHAMGKTIMVVGCDPK   40 (269)
T ss_dssp             EEEEEEE-CTTSSHHHHHHHHHHHHHTTTCCEEEEEECTT
T ss_pred             CEEEEEC-CCcCCHHHHHHHHHHHHHhCCCcEEEEecCCC
Confidence            4677887 88888764     5588899999999998754

>d2gz1a1 c.2.1.3 (A:2-127,A:330-357) Aspartate beta-semialdehyde dehydrogenase {Streptococcus pneumoniae [TaxId: 1313]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Aspartate beta-semialdehyde dehydrogenase
species: Streptococcus pneumoniae [TaxId: 1313]

Probab=83.79  E-value=0.59  Score=32.89  Aligned_cols=24  Identities=21%  Similarity=0.491  Sum_probs=21.9

Q ss_pred             EEEEECCCChhHHHHHHHHHHcCC
Q 025509            2 DIVITGATSGIGTETARVLALRGV   25 (251)
Q Consensus         2 ~vlItG~s~gIG~a~a~~l~~~G~   25 (251)
                      +|.|.||||..|.++.+.|.++.+
T Consensus         3 kVaIvGATGyvG~eLirlL~~H~f   26 (154)
T d2gz1a1           3 TVAVVGATGAVGAQMIKMLEESTL   26 (154)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTCCS
T ss_pred             EEEEECCCcHHHHHHHHHHHcCCC
Confidence            588999999999999999998865

>d1pn3a_ c.87.1.5 (A:) TDP-epi-vancosaminyltransferase GtfA {Amycolatopsis orientalis [TaxId: 31958]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Gtf glycosyltransferase
domain: TDP-epi-vancosaminyltransferase GtfA
species: Amycolatopsis orientalis [TaxId: 31958]

Probab=83.77  E-value=2.3  Score=33.29  Aligned_cols=32  Identities=25%  Similarity=0.232  Sum_probs=22.6

Q ss_pred             CEEEEE-CCCCh-h--HHHHHHHHHHcCCEEEEEec
Q 025509            1 MDIVIT-GATSG-I--GTETARVLALRGVHVVMGVR   32 (251)
Q Consensus         1 k~vlIt-G~s~g-I--G~a~a~~l~~~G~~Vi~~~r   32 (251)
                      |+||++ +||+| |  -.++|++|.++|++|.+++.
T Consensus         1 mril~~~~gt~Ghi~P~laLA~~L~~rGh~V~~~~~   36 (391)
T d1pn3a_           1 MRVLITGCGSRGDTEPLVALAARLRELGADARMCLP   36 (391)
T ss_dssp             CEEEEEEESSHHHHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred             CEEEEEcCCChhHHHHHHHHHHHHHHCCCEEEEEEC
Confidence            566664 44432 2  35689999999999988774

>d1dxya1 c.2.1.4 (A:101-299) D-2-hydroxyisocaproate dehydrogenase {Lactobacillus casei [TaxId: 1582]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-2-hydroxyisocaproate dehydrogenase
species: Lactobacillus casei [TaxId: 1582]

Probab=83.50  E-value=0.74  Score=33.90  Aligned_cols=34  Identities=18%  Similarity=0.155  Sum_probs=28.4

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCch
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIA   35 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~   35 (251)
                      |++.|.| -|.||+++|+.|...|++|+..++...
T Consensus        46 ktvgIiG-~G~IG~~va~~l~~fg~~v~~~d~~~~   79 (199)
T d1dxya1          46 QTVGVMG-TGHIGQVAIKLFKGFGAKVIAYDPYPM   79 (199)
T ss_dssp             SEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSCC
T ss_pred             eeeeeee-cccccccccccccccceeeeccCCccc
Confidence            4677776 578999999999999999999988643

>d1gdha1 c.2.1.4 (A:101-291) D-glycerate dehydrogenase {Hyphomicrobium methylovorum [TaxId: 84]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-glycerate dehydrogenase
species: Hyphomicrobium methylovorum [TaxId: 84]

Probab=83.08  E-value=0.93  Score=33.13  Aligned_cols=35  Identities=17%  Similarity=0.041  Sum_probs=28.4

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchh
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAA   36 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~   36 (251)
                      |++.|.| -|.||+++|+.+...|++|+..++....
T Consensus        48 ~tvgIiG-~G~IG~~va~~l~~fg~~v~~~d~~~~~   82 (191)
T d1gdha1          48 KTLGIYG-FGSIGQALAKRAQGFDMDIDYFDTHRAS   82 (191)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHTTTCEEEEECSSCCC
T ss_pred             cceEEee-cccchHHHHHHHHhhccccccccccccc
Confidence            4566665 5799999999999999999998876543

>d1gesa1 c.3.1.5 (A:3-146,A:263-335) Glutathione reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Escherichia coli [TaxId: 562]

Probab=82.93  E-value=0.65  Score=34.08  Aligned_cols=31  Identities=13%  Similarity=0.120  Sum_probs=27.1

Q ss_pred             EEEECCCChhHHHHHHHHHHcCCEEEEEecCc
Q 025509            3 IVITGATSGIGTETARVLALRGVHVVMGVRDI   34 (251)
Q Consensus         3 vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~   34 (251)
                      ++|.|| |..|.+.|.++++.|.+|.++.++.
T Consensus         5 vvVIG~-G~aG~~aA~~a~~~G~kV~iiE~~~   35 (217)
T d1gesa1           5 YIAIGG-GSGGIASINRAAMYGQKCALIEAKE   35 (217)
T ss_dssp             EEEECC-SHHHHHHHHHHHTTTCCEEEEESSC
T ss_pred             EEEECC-CHHHHHHHHHHHHCCCEEEEEeccC
Confidence            578876 7889999999999999999998864

>d2f5va1 c.3.1.2 (A:43-354,A:553-619) Pyranose 2-oxidase {White-rot fungus (Peniophora sp. SG) [TaxId: 204723]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Pyranose 2-oxidase
species: White-rot fungus (Peniophora sp. SG) [TaxId: 204723]

Probab=82.87  E-value=0.5  Score=37.56  Aligned_cols=29  Identities=34%  Similarity=0.287  Sum_probs=24.8

Q ss_pred             EEEECCCChhHHHHHHHHHHcCCEEEEEec
Q 025509            3 IVITGATSGIGTETARVLALRGVHVVMGVR   32 (251)
Q Consensus         3 vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r   32 (251)
                      |+|.|++-+ |..+|.+|++.|.+|+++-+
T Consensus         7 viIVGsG~a-G~v~A~~La~~G~kVlvLEa   35 (379)
T d2f5va1           7 VVIVGSGPI-GCTYARELVGAGYKVAMFDI   35 (379)
T ss_dssp             EEEECCSHH-HHHHHHHHHHTTCEEEEECS
T ss_pred             EEEECcCHH-HHHHHHHHhhCCCeEEEEec
Confidence            678876655 99999999999999999865

>d1t4ba1 c.2.1.3 (A:1-133,A:355-367) Aspartate beta-semialdehyde dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Aspartate beta-semialdehyde dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=82.78  E-value=1.2  Score=31.00  Aligned_cols=34  Identities=9%  Similarity=0.066  Sum_probs=26.4

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcC----CEEEEEecCc
Q 025509            1 MDIVITGATSGIGTETARVLALRG----VHVVMGVRDI   34 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G----~~Vi~~~r~~   34 (251)
                      |+|-|.||||-+|..+.+.|+++.    .++.+.+++.
T Consensus         2 kkVaIvGATG~VGqeli~~Ll~~~~~p~~~l~~~~ss~   39 (146)
T d1t4ba1           2 QNVGFIGWRGMVGSVLMQRMVEERDFDAIRPVFFSTSQ   39 (146)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTGGGGSEEEEEESSS
T ss_pred             cEEEEECCccHHHHHHHHHHHhCCCCCeeEEEEeeccc
Confidence            578899999999999999887653    2566666554

>d1mo9a2 c.3.1.5 (A:193-313) NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase {Xanthobacter sp., py2 [TaxId: 35809]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase
species: Xanthobacter sp., py2 [TaxId: 35809]

Probab=82.69  E-value=0.8  Score=30.37  Aligned_cols=34  Identities=26%  Similarity=0.289  Sum_probs=28.1

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCch
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIA   35 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~   35 (251)
                      |+++|.| +|.||..+|..|++.|.+|.++.|.+.
T Consensus        23 ~~vvVvG-gG~ig~E~A~~l~~~g~~vt~i~~~~~   56 (121)
T d1mo9a2          23 STVVVVG-GSKTAVEYGCFFNATGRRTVMLVRTEP   56 (121)
T ss_dssp             SEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSCT
T ss_pred             CEEEEEC-CCHHHHHHHHHHHhcchhheEeeccch
Confidence            3566665 679999999999999999999998754

>d2blna2 c.65.1.1 (A:1-203) Polymyxin resistance protein ArnA, N-terminal domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Formyltransferase
superfamily: Formyltransferase
family: Formyltransferase
domain: Polymyxin resistance protein ArnA, N-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=82.57  E-value=3.2  Score=30.25  Aligned_cols=30  Identities=20%  Similarity=0.193  Sum_probs=23.9

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGV   31 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~   31 (251)
                      |++++. |++..|..+.+.|.+.|++|..+.
T Consensus         1 Mkiv~~-~~~~~g~~~l~~L~~~g~~I~~Vv   30 (203)
T d2blna2           1 MKTVVF-AYHDMGCLGIEALLAAGYEISAIF   30 (203)
T ss_dssp             CEEEEE-ECHHHHHHHHHHHHHTTCEEEEEE
T ss_pred             CeEEEE-ecCHHHHHHHHHHHHCCCCEEEEE
Confidence            456666 457799999999999999986554

>d2i0za1 c.3.1.8 (A:1-192,A:362-420) Flavoprotein BC4706 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: HI0933 N-terminal domain-like
domain: Flavoprotein BC4706
species: Bacillus cereus [TaxId: 1396]

Probab=82.50  E-value=0.64  Score=34.78  Aligned_cols=33  Identities=18%  Similarity=0.181  Sum_probs=27.4

Q ss_pred             EEEECCCChhHHHHHHHHHHcCCEEEEEecCchh
Q 025509            3 IVITGATSGIGTETARVLALRGVHVVMGVRDIAA   36 (251)
Q Consensus         3 vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~   36 (251)
                      |+|.||+ --|...|..|+++|++|+++.++...
T Consensus         5 ViIIGaG-~aGl~aA~~la~~G~~V~liEk~~~~   37 (251)
T d2i0za1           5 VIVIGGG-PSGLMAAIGAAEEGANVLLLDKGNKL   37 (251)
T ss_dssp             EEEECCS-HHHHHHHHHHHHTTCCEEEECSSSSS
T ss_pred             EEEECcC-HHHHHHHHHHHHCCCcEEEEeCCCCC
Confidence            6778765 67889999999999999999987543

>d1ri5a_ c.66.1.34 (A:) mRNA cap (Guanine N-7) methyltransferase {Fungus (Encephalitozoon cuniculi) [TaxId: 6035]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: mRNA cap (Guanine N-7) methyltransferase
domain: mRNA cap (Guanine N-7) methyltransferase
species: Fungus (Encephalitozoon cuniculi) [TaxId: 6035]

Probab=82.20  E-value=2  Score=32.25  Aligned_cols=77  Identities=9%  Similarity=-0.065  Sum_probs=53.5

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCC-EEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCC
Q 025509            1 MDIVITGATSGIGTETARVLALRGV-HVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQ   79 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~   79 (251)
                      ++||=.|++.|   ..+..+++.|+ +|+.++.++..++.+.+...+......+.+++.|+....         ....+.
T Consensus        26 ~~VLDlGCG~G---~~~~~~~~~~~~~v~GiD~S~~~l~~A~~r~~~~~~~~~v~f~~~D~~~~~---------~~~~~~   93 (252)
T d1ri5a_          26 DSVLDLGCGKG---GDLLKYERAGIGEYYGVDIAEVSINDARVRARNMKRRFKVFFRAQDSYGRH---------MDLGKE   93 (252)
T ss_dssp             CEEEEETCTTT---TTHHHHHHHTCSEEEEEESCHHHHHHHHHHHHTSCCSSEEEEEESCTTTSC---------CCCSSC
T ss_pred             CEEEEecccCc---HHHHHHHHcCCCeEEEecCCHHHHHHHHHHHHhcCCCcceEEEEcchhhhc---------cccccc
Confidence            36777888876   23456666675 799999999888888776665443557899999985321         011247


Q ss_pred             eeEEEEcCCC
Q 025509           80 LNILINNAGI   89 (251)
Q Consensus        80 id~lv~~ag~   89 (251)
                      +|+|+.+.++
T Consensus        94 fD~V~~~~~l  103 (252)
T d1ri5a_          94 FDVISSQFSF  103 (252)
T ss_dssp             EEEEEEESCG
T ss_pred             ceEEEEccee
Confidence            9999887654

>d1xxla_ c.66.1.41 (A:) Hypothetical protein YcgJ {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: UbiE/COQ5-like
domain: Hypothetical protein YcgJ
species: Bacillus subtilis [TaxId: 1423]

Probab=82.12  E-value=3.1  Score=30.64  Aligned_cols=75  Identities=12%  Similarity=-0.005  Sum_probs=53.2

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      ++||=.|+++|.   ++..|++.+.+|+.++.++.-++.+.+.+.+.. -.++.++..|+.+.. +         ..+.+
T Consensus        18 ~rILDiGcGtG~---~~~~la~~~~~v~gvD~S~~~l~~A~~~~~~~~-~~~~~~~~~d~~~~~-~---------~~~~f   83 (234)
T d1xxla_          18 HRVLDIGAGAGH---TALAFSPYVQECIGVDATKEMVEVASSFAQEKG-VENVRFQQGTAESLP-F---------PDDSF   83 (234)
T ss_dssp             CEEEEESCTTSH---HHHHHGGGSSEEEEEESCHHHHHHHHHHHHHHT-CCSEEEEECBTTBCC-S---------CTTCE
T ss_pred             CEEEEeCCcCcH---HHHHHHHhCCeEEEEeCChhhhhhhhhhhcccc-ccccccccccccccc-c---------ccccc
Confidence            367888998884   445677788999999999887777776666543 245889999986521 1         12579


Q ss_pred             eEEEEcCCC
Q 025509           81 NILINNAGI   89 (251)
Q Consensus        81 d~lv~~ag~   89 (251)
                      |+++.+-.+
T Consensus        84 D~v~~~~~l   92 (234)
T d1xxla_          84 DIITCRYAA   92 (234)
T ss_dssp             EEEEEESCG
T ss_pred             ceeeeecee
Confidence            988876553

>d1v59a1 c.3.1.5 (A:1-160,A:283-355) Dihydrolipoamide dehydrogenase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=81.95  E-value=0.63  Score=34.35  Aligned_cols=32  Identities=22%  Similarity=0.127  Sum_probs=26.8

Q ss_pred             EEEECCCChhHHHHHHHHHHcCCEEEEEecCch
Q 025509            3 IVITGATSGIGTETARVLALRGVHVVMGVRDIA   35 (251)
Q Consensus         3 vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~   35 (251)
                      |+|.||+ --|.+.|.++++.|.+|+++.+...
T Consensus         8 viVIG~G-pAGl~aA~~aa~~G~kV~lie~~~~   39 (233)
T d1v59a1           8 VVIIGGG-PAGYVAAIKAAQLGFNTACVEKRGK   39 (233)
T ss_dssp             EEEECCS-HHHHHHHHHHHHTTCCEEEEESSSS
T ss_pred             EEEECCC-HHHHHHHHHHHHCCCcEEEEEecCC
Confidence            6788874 5599999999999999999987543

>d1nkva_ c.66.1.21 (A:) Hypothetical Protein YjhP {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Hypothetical Protein YjhP
domain: Hypothetical Protein YjhP
species: Escherichia coli [TaxId: 562]

Probab=81.92  E-value=3.6  Score=30.54  Aligned_cols=74  Identities=15%  Similarity=0.056  Sum_probs=51.1

Q ss_pred             EEEEECCCChhHHHHHHHHHH-cCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            2 DIVITGATSGIGTETARVLAL-RGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         2 ~vlItG~s~gIG~a~a~~l~~-~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      +||=.|++.|   .++..|++ .|++|+.++-++.-.+...+...+...+.++.++..|+.+.           ...+++
T Consensus        36 ~VLDiGCG~G---~~~~~la~~~~~~v~GvD~s~~~~~~ar~~~~~~gl~~~v~~~~~d~~~~-----------~~~~~f  101 (245)
T d1nkva_          36 RILDLGSGSG---EMLCTWARDHGITGTGIDMSSLFTAQAKRRAEELGVSERVHFIHNDAAGY-----------VANEKC  101 (245)
T ss_dssp             EEEEETCTTC---HHHHHHHHHTCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCCTTC-----------CCSSCE
T ss_pred             EEEEEcCCCC---HHHHHHHHhcCCEEEEEecccchhhHHHHHHHHhhccccchhhhhHHhhc-----------cccCce
Confidence            4666787766   24555665 48899999999877777666655554456799999998752           112579


Q ss_pred             eEEEEcCCC
Q 025509           81 NILINNAGI   89 (251)
Q Consensus        81 d~lv~~ag~   89 (251)
                      |.++..-.+
T Consensus       102 D~v~~~~~~  110 (245)
T d1nkva_         102 DVAACVGAT  110 (245)
T ss_dssp             EEEEEESCG
T ss_pred             eEEEEEehh
Confidence            988877653

>d1vbka1 c.26.2.6 (A:176-307) Hypothetical protein PH1313, C-terminal domain {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: Adenine nucleotide alpha hydrolase-like
superfamily: Adenine nucleotide alpha hydrolases-like
family: ThiI-like
domain: Hypothetical protein PH1313, C-terminal domain
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=81.87  E-value=5.7  Score=26.86  Aligned_cols=68  Identities=13%  Similarity=0.081  Sum_probs=41.0

Q ss_pred             CChhHHHHHHHHH-HcCCEEEEEecC--c---hhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCeeE
Q 025509            9 TSGIGTETARVLA-LRGVHVVMGVRD--I---AAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQLNI   82 (251)
Q Consensus         9 s~gIG~a~a~~l~-~~G~~Vi~~~r~--~---~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~id~   82 (251)
                      |||| +.+|-++. ++|++|+.+..+  +   ++..++.+.+.+-.++.++.++..+.  .+.+.++.+++     ..+.
T Consensus        12 SGGi-SpVAa~lmmkRG~~V~~v~f~~~~~~~ekv~~l~~~L~~y~~~~~~~~~v~~~--~~~~~riA~~~-----~a~~   83 (132)
T d1vbka1          12 HDEL-SALAIFLMMKRGVEVIPVYIGKDDKNLEKVRSLWNLLKRYSYGSKGFLVVAES--FDRVLKLIRDF-----GVKG   83 (132)
T ss_dssp             SSHH-HHHHHHHHHHBTCEEEEEEESCSSHHHHHHHHHHHHHHTTCTTSCCCCEEESS--HHHHHHHHHHH-----TCCE
T ss_pred             cCCc-hHHHHHHHHHCCCEEEEEEEcCCHHHHHHHHHHHHHHHHhCCCCCcEEEEeeH--HHHHHHHHHHh-----hhhc
Confidence            7899 99999986 679998776542  2   23344445554444455666665554  34445544444     3456


Q ss_pred             EE
Q 025509           83 LI   84 (251)
Q Consensus        83 lv   84 (251)
                      ++
T Consensus        84 iv   85 (132)
T d1vbka1          84 VI   85 (132)
T ss_dssp             EE
T ss_pred             eE
Confidence            65

>d1im8a_ c.66.1.14 (A:) Hypothetical protein HI0319 (YecO) {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Hypothetical protein HI0319 (YecO)
domain: Hypothetical protein HI0319 (YecO)
species: Haemophilus influenzae [TaxId: 727]

Probab=81.82  E-value=1.4  Score=32.60  Aligned_cols=88  Identities=11%  Similarity=0.128  Sum_probs=57.4

Q ss_pred             EEEEECCCChh-HHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            2 DIVITGATSGI-GTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         2 ~vlItG~s~gI-G~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      +||=.|++.|- ...+++.+...|++|+.++.++.-++.+.+.+.+......+.+...|+.+.            .+...
T Consensus        42 ~vLDlGCGtG~~~~~l~~~~~~~~~~v~giD~S~~ml~~A~~~~~~~~~~~~~~~~~~d~~~~------------~~~~~  109 (225)
T d1im8a_          42 NVYDLGCSRGAATLSARRNINQPNVKIIGIDNSQPMVERCRQHIAAYHSEIPVEILCNDIRHV------------EIKNA  109 (225)
T ss_dssp             EEEEESCTTCHHHHHHHHTCCCSSCEEEEECSCHHHHHHHHHHHHTSCCSSCEEEECSCTTTC------------CCCSE
T ss_pred             EEEEeccchhhHHHHHHHhhcCCCCceEEeCCCHHHHHHHHHHhHhhcccchhhhccchhhcc------------ccccc
Confidence            57788888654 455666555678899999999988888877776654455677777676531            12366


Q ss_pred             eEEEEcCCCCCCCCcCCchhhHHHH
Q 025509           81 NILINNAGIMGTPFMLSKDNIELQF  105 (251)
Q Consensus        81 d~lv~~ag~~~~~~~~~~~~~~~~~  105 (251)
                      |+++.+...    ..++.+++...+
T Consensus       110 d~i~~~~~l----~~~~~~d~~~~l  130 (225)
T d1im8a_         110 SMVILNFTL----QFLPPEDRIALL  130 (225)
T ss_dssp             EEEEEESCG----GGSCGGGHHHHH
T ss_pred             eeeEEeeec----cccChhhHHHHH
Confidence            777766542    234555555433

>d1dxla1 c.3.1.5 (A:4-152,A:276-347) Dihydrolipoamide dehydrogenase {Garden pea (Pisum sativum) [TaxId: 3888]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Garden pea (Pisum sativum) [TaxId: 3888]

Probab=81.77  E-value=0.75  Score=33.67  Aligned_cols=31  Identities=23%  Similarity=0.091  Sum_probs=26.7

Q ss_pred             EEEECCCChhHHHHHHHHHHcCCEEEEEecCc
Q 025509            3 IVITGATSGIGTETARVLALRGVHVVMGVRDI   34 (251)
Q Consensus         3 vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~   34 (251)
                      |+|.|| |-.|.+.|..+++.|.+|+++.+..
T Consensus         6 vvVIGg-GpaGl~aA~~aa~~G~kV~vie~~~   36 (221)
T d1dxla1           6 VVIIGG-GPGGYVAAIKAAQLGFKTTCIEKRG   36 (221)
T ss_dssp             EEEECC-SHHHHHHHHHHHHHTCCEEEEECSS
T ss_pred             EEEECC-CHHHHHHHHHHHHCCCcEEEEEecC
Confidence            678887 4679999999999999999998754

>d1mb4a1 c.2.1.3 (A:1-132,A:355-369) Aspartate beta-semialdehyde dehydrogenase {Vibrio cholerae [TaxId: 666]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Aspartate beta-semialdehyde dehydrogenase
species: Vibrio cholerae [TaxId: 666]

Probab=81.76  E-value=1.4  Score=30.75  Aligned_cols=33  Identities=12%  Similarity=0.137  Sum_probs=25.4

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcC----CEEEEEecC
Q 025509            1 MDIVITGATSGIGTETARVLALRG----VHVVMGVRD   33 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G----~~Vi~~~r~   33 (251)
                      |+|.|.||||..|..+.+.|.++.    .++...+.+
T Consensus         1 mKVaIiGATGyvG~eLi~lLl~~~~~p~~~i~~~ss~   37 (147)
T d1mb4a1           1 MRVGLVGWRGMVGSVLMQRMVEERDFDLIEPVFFSTS   37 (147)
T ss_dssp             CEEEEESCSSHHHHHHHHHHHHTTGGGGSEEEEEESS
T ss_pred             CEEEEECCccHHHHHHHHHHHhcCCCCceEEEEeccc
Confidence            579999999999999999887642    356555544

>d2fpoa1 c.66.1.46 (A:10-192) Methylase YhhF {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: YhhF-like
domain: Methylase YhhF
species: Escherichia coli [TaxId: 562]

Probab=81.67  E-value=4.1  Score=29.05  Aligned_cols=68  Identities=12%  Similarity=0.094  Sum_probs=45.5

Q ss_pred             CCCChhHHHHHHHHHHcCC-EEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCeeEEEE
Q 025509            7 GATSGIGTETARVLALRGV-HVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQLNILIN   85 (251)
Q Consensus         7 G~s~gIG~a~a~~l~~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~id~lv~   85 (251)
                      .|||.+|.+    .+++|+ +|++++.+....+-+.+.+... ...++.++..|+.         +.+.....++|+++.
T Consensus        52 aGsG~~gie----alsrGa~~v~~VE~~~~a~~~~k~N~~~~-~~~~~~ii~~d~~---------~~l~~~~~~fDlIf~  117 (183)
T d2fpoa1          52 AGSGALGLE----ALSRYAAGATLIEMDRAVSQQLIKNLATL-KAGNARVVNSNAM---------SFLAQKGTPHNIVFV  117 (183)
T ss_dssp             CTTCHHHHH----HHHTTCSEEEEECSCHHHHHHHHHHHHHT-TCCSEEEECSCHH---------HHHSSCCCCEEEEEE
T ss_pred             ccccceeee----EEecCcceeEEEEEeechhhHHHHHHhhc-cccceeeeeeccc---------ccccccccccCEEEE
Confidence            456666655    445787 7999999988888777777553 2345777777642         223334457999988


Q ss_pred             cCC
Q 025509           86 NAG   88 (251)
Q Consensus        86 ~ag   88 (251)
                      ...
T Consensus       118 DPP  120 (183)
T d2fpoa1         118 DPP  120 (183)
T ss_dssp             CCS
T ss_pred             cCc
Confidence            764

>d1fcda1 c.3.1.5 (A:1-114,A:256-327) Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit {Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit
species: Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]

Probab=81.29  E-value=0.99  Score=31.50  Aligned_cols=33  Identities=18%  Similarity=0.274  Sum_probs=26.9

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCC--EEEEEecCc
Q 025509            1 MDIVITGATSGIGTETARVLALRGV--HVVMGVRDI   34 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~--~Vi~~~r~~   34 (251)
                      |+|+|.|| |..|..+|.+|.+.|.  +|+++.+++
T Consensus         3 krivIvGg-G~~G~e~A~~l~~~~~~~~Vtlie~~~   37 (186)
T d1fcda1           3 RKVVVVGG-GTGGATAAKYIKLADPSIEVTLIEPNT   37 (186)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHCTTSEEEEECSCS
T ss_pred             CcEEEECc-cHHHHHHHHHHHHcCCCCcEEEEECCC
Confidence            68899986 5779999999999874  788887664

>d2fr1a2 c.2.1.2 (A:1448-1656) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Erythromycin synthase, eryAI, 1st ketoreductase module
species: Saccharopolyspora erythraea [TaxId: 1836]

Probab=81.28  E-value=7.5  Score=27.87  Aligned_cols=95  Identities=6%  Similarity=-0.191  Sum_probs=51.7

Q ss_pred             hcCCCeeEEEEcCCCCCCCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEEcCccccccccCCccc
Q 025509           75 IQHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRF  154 (251)
Q Consensus        75 ~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~  154 (251)
                      ...+.++.||+-.+........ .+..    ...+...+.++|++.    ..    ....++.+++..+...        
T Consensus        73 ~~~~~~~~vv~l~~~~~~~~~~-~~~~----~~~~~~~l~l~qal~----~~----~~~~~l~~vT~~a~~~--------  131 (209)
T d2fr1a2          73 RSVGEVAGVLSLLAVDEAEPEE-APLA----LASLADTLSLVQAMV----SA----ELGCPLWTVTESAVAT--------  131 (209)
T ss_dssp             TTSCCCSEEEECTTTTCCCCSS-CGGG----CHHHHHHHHHHHHHH----HT----TCCCCEEEEEESCSCS--------
T ss_pred             hccCCCCeEEEeCCCCCCCCcc-hhHH----HHHHHHHHHHHHHHH----hC----CCCCcEEEEEcCCccc--------
Confidence            3446788899887754321111 1111    123444455555543    22    1235666666533211        


Q ss_pred             ccCCCCCCCCcccccchhHHHHHHHHHHHHHHhccCCCcEEEEEee
Q 025509          155 DKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVH  200 (251)
Q Consensus       155 ~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~  200 (251)
                              ...-..-....+++-+|+++++.|+...-  ++...+-
T Consensus       132 --------~~~d~~~~p~~A~l~Gl~r~~~~E~P~l~--~~~vDl~  167 (209)
T d2fr1a2         132 --------GPFERVRNAAHGALWGVGRVIALENPAVW--GGLVDVP  167 (209)
T ss_dssp             --------STTSCCSCGGGHHHHHHHHHHHHHCGGGE--EEEEEEC
T ss_pred             --------CCCcccCCHhHHhHHHHHHHHHHhCCCce--EEEEECC
Confidence                    11122345678999999999999997644  5555553

>d2frna1 c.66.1.47 (A:19-278) Hypothetical protein PH0793 {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Met-10+ protein-like
domain: Hypothetical protein PH0793
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=80.77  E-value=3.5  Score=31.34  Aligned_cols=71  Identities=15%  Similarity=0.054  Sum_probs=48.9

Q ss_pred             EEEEECCC-ChhHHHHHHHHHHcC-CEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCC
Q 025509            2 DIVITGAT-SGIGTETARVLALRG-VHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQ   79 (251)
Q Consensus         2 ~vlItG~s-~gIG~a~a~~l~~~G-~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~   79 (251)
                      +||-.||+ |+++..+|+    .| .+|+.++.|+...+-+.+.+....-...+.++..|..+..           ..+.
T Consensus       110 ~VlD~~aG~G~~~l~~a~----~~~~~V~avd~n~~a~~~~~~N~~~n~l~~~v~~~~~D~~~~~-----------~~~~  174 (260)
T d2frna1         110 LVVDMFAGIGHLSLPIAV----YGKAKVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMDNRDFP-----------GENI  174 (260)
T ss_dssp             EEEETTCTTTTTHHHHHH----HTCCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCTTTCC-----------CCSC
T ss_pred             EEEECcceEcHHHHHHHH----hCCcEEEEecCCHHHHHHHHHHHHHhCCCceEEEEEcchHHhc-----------cCCC
Confidence            46666665 555555543    45 5999999999888888777766443567999999986521           1247


Q ss_pred             eeEEEEcC
Q 025509           80 LNILINNA   87 (251)
Q Consensus        80 id~lv~~a   87 (251)
                      .|.||.+-
T Consensus       175 ~D~Ii~~~  182 (260)
T d2frna1         175 ADRILMGY  182 (260)
T ss_dssp             EEEEEECC
T ss_pred             CCEEEECC
Confidence            89988763

>d2b4aa1 c.23.1.1 (A:2-119) Hypothetical protein BH3024 {Bacillus halodurans [TaxId: 86665]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: CheY-like
family: CheY-related
domain: Hypothetical protein BH3024
species: Bacillus halodurans [TaxId: 86665]

Probab=80.75  E-value=1.7  Score=28.82  Aligned_cols=81  Identities=14%  Similarity=0.092  Sum_probs=52.9

Q ss_pred             CEEEEECCCChhHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHH-HHHHHHHHHHhcCCC
Q 025509            1 MDIVITGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLA-SVRNFASEYNIQHHQ   79 (251)
Q Consensus         1 k~vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~-~i~~~~~~~~~~~g~   79 (251)
                      ++|||.=-...+...+...|.+.|+.|..+....    +..+.+.+.   .....+.+|+.-++ +--++++++++.+..
T Consensus         3 ~rILvVdDd~~~~~~l~~~L~~~g~~v~~~~~~~----~al~~l~~~---~~~dliilD~~lp~~~G~el~~~ir~~~~~   75 (118)
T d2b4aa1           3 FRVTLVEDEPSHATLIQYHLNQLGAEVTVHPSGS----AFFQHRSQL---STCDLLIVSDQLVDLSIFSLLDIVKEQTKQ   75 (118)
T ss_dssp             CEEEEECSCHHHHHHHHHHHHHTTCEEEEESSHH----HHHHTGGGG---GSCSEEEEETTCTTSCHHHHHHHHTTSSSC
T ss_pred             CEEEEEECCHHHHHHHHHHHHhcCCCeEEECCHH----HHHHHHHhc---CCCCEEEEeCCCCCCCHHHHHHHHHhcCCC
Confidence            3688888888999999999999999988655432    222223221   23455556665322 234567788777666


Q ss_pred             eeEEEEcCC
Q 025509           80 LNILINNAG   88 (251)
Q Consensus        80 id~lv~~ag   88 (251)
                      +-+++..+.
T Consensus        76 ~pii~lt~~   84 (118)
T d2b4aa1          76 PSVLILTTG   84 (118)
T ss_dssp             CEEEEEESC
T ss_pred             CcEEEEECC
Confidence            777887654

>d1onfa1 c.3.1.5 (A:1-153,A:271-376) Glutathione reductase {Plasmodium falciparum [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Plasmodium falciparum [TaxId: 5833]

Probab=80.36  E-value=0.77  Score=34.90  Aligned_cols=31  Identities=26%  Similarity=0.404  Sum_probs=26.4

Q ss_pred             EEEECCCChhHHHHHHHHHHcCCEEEEEecCc
Q 025509            3 IVITGATSGIGTETARVLALRGVHVVMGVRDI   34 (251)
Q Consensus         3 vlItG~s~gIG~a~a~~l~~~G~~Vi~~~r~~   34 (251)
                      ++|.||+.+ |...|.++++.|.+|.++.+..
T Consensus         4 viVIG~G~a-G~~aA~~aa~~G~~V~liE~~~   34 (259)
T d1onfa1           4 LIVIGGGSG-GMAAARRAARHNAKVALVEKSR   34 (259)
T ss_dssp             EEEECCSHH-HHHHHHHHHHTTCCEEEEESSS
T ss_pred             EEEECCCHH-HHHHHHHHHHCCCeEEEEecCC
Confidence            577877655 9999999999999999999753

>d2eyqa5 c.37.1.19 (A:779-989) Transcription-repair coupling factor, TRCF {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Tandem AAA-ATPase domain
domain: Transcription-repair coupling factor, TRCF
species: Escherichia coli [TaxId: 562]

Probab=80.23  E-value=5.7  Score=29.22  Aligned_cols=64  Identities=16%  Similarity=0.280  Sum_probs=53.1

Q ss_pred             HcCCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCeeEEEEcCC
Q 025509           22 LRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQLNILINNAG   88 (251)
Q Consensus        22 ~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~id~lv~~ag   88 (251)
                      .+|..|+.++-.-+..++..+.+.+..|+.++.++...++ .++.++.+.+..+  |.+|+||...-
T Consensus        29 ~rGgQvy~V~p~I~~~e~~~~~l~~~~p~~~i~~lHGkm~-~~eke~im~~F~~--g~~~ILv~Ttv   92 (211)
T d2eyqa5          29 LRGGQVYYLYNDVENIQKAAERLAELVPEARIAIGHGQMR-ERELERVMNDFHH--QRFNVLVCTTI   92 (211)
T ss_dssp             TTTCEEEEECCCSSCHHHHHHHHHHHCTTSCEEECCSSCC-HHHHHHHHHHHHT--TSCCEEEESST
T ss_pred             HcCCeEEEEEcCccchhhHHHHHHHhCCceEEEEEEeccC-HHHHHHHHHHHHc--CCcceEEEehh
Confidence            3577999998887888999999999999999999999995 5777777777654  68999999874

>d1qkia1 c.2.1.3 (A:12-199,A:435-449) Glucose 6-phosphate dehydrogenase, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glucose 6-phosphate dehydrogenase, N-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=80.10  E-value=2.4  Score=31.16  Aligned_cols=74  Identities=15%  Similarity=0.103  Sum_probs=49.2

Q ss_pred             EEEEECCCChhHH-----HHHHHHHH----cCCEEEEEecCchhHHHHHHHHHhhCC------------CCceEEEEecC
Q 025509            2 DIVITGATSGIGT-----ETARVLAL----RGVHVVMGVRDIAAGKDVKETIVKEIP------------SAKVDAMELDL   60 (251)
Q Consensus         2 ~vlItG~s~gIG~-----a~a~~l~~----~G~~Vi~~~r~~~~~~~~~~~~~~~~~------------~~~v~~~~~D~   60 (251)
                      +++|-||+|-+.+     |+-..+..    .+.+|+.++|++-..++..+.+.+...            -..+.++.+|+
T Consensus        22 t~VIFGatGDLA~RKL~PALf~L~~~g~Lp~~~~Iig~aR~~~s~e~fr~~~~~~~~~~~~~~~~~~~f~~~~~Y~~~d~  101 (203)
T d1qkia1          22 IFIIMGASGDLAKKKIYPTIWWLFRDGLLPENTFIVGYARSRLTVADIRKQSEPFFKATPEEKLKLEDFFARNSYVAGQY  101 (203)
T ss_dssp             EEEEETTTSHHHHHTHHHHHHHHHHTTCSCSSEEEEEEBSSCCSCHHHHHHHSCCTTCCGGGHHHHHHHHTTEECCBCCT
T ss_pred             EEEEECcccHHHHhHHHHHHHHHHHcCCCCCCcEEEEEECCCCCHHHHHHHHHHHHhhchhhHHHHHHHHHhhccccCcC
Confidence            5789999998875     33332222    246799999987655555544432211            23578889999


Q ss_pred             CCHHHHHHHHHHHHh
Q 025509           61 SSLASVRNFASEYNI   75 (251)
Q Consensus        61 ~~~~~i~~~~~~~~~   75 (251)
                      ++.++..++-+.+.+
T Consensus       102 ~~~~~~~~L~~~l~~  116 (203)
T d1qkia1         102 DDAASYQRLNSHMNA  116 (203)
T ss_dssp             TCHHHHHHHHHHHHH
T ss_pred             CChhhHHHHHHHHHH
Confidence            999998888776654

>d2ex4a1 c.66.1.42 (A:2-224) Adrenal gland protein AD-003 (C9orf32) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: AD-003 protein-like
domain: Adrenal gland protein AD-003 (C9orf32)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=80.09  E-value=2.7  Score=30.76  Aligned_cols=74  Identities=15%  Similarity=-0.040  Sum_probs=48.5

Q ss_pred             EEEEECCCChhHHHHHHHHHHc-CCEEEEEecCchhHHHHHHHHHhhCCCCceEEEEecCCCHHHHHHHHHHHHhcCCCe
Q 025509            2 DIVITGATSGIGTETARVLALR-GVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL   80 (251)
Q Consensus         2 ~vlItG~s~gIG~a~a~~l~~~-G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~i~~~~~~~~~~~g~i   80 (251)
                      +||=.|++.|.   ++..|++. +.+|..++-++.-++.+.+.+.+.. ...+.++..|+.+..          ...+.+
T Consensus        63 ~vLDiGcG~G~---~~~~l~~~~~~~v~~vD~s~~~l~~ak~~~~~~~-~~~~~f~~~d~~~~~----------~~~~~f  128 (222)
T d2ex4a1          63 CALDCGAGIGR---ITKRLLLPLFREVDMVDITEDFLVQAKTYLGEEG-KRVRNYFCCGLQDFT----------PEPDSY  128 (222)
T ss_dssp             EEEEETCTTTH---HHHHTTTTTCSEEEEEESCHHHHHHHHHHTGGGG-GGEEEEEECCGGGCC----------CCSSCE
T ss_pred             EEEEeccCCCH---hhHHHHHhcCCEEEEeecCHHHhhcccccccccc-ccccccccccccccc----------cccccc
Confidence            57778887764   44444544 4489999999877777766554432 235788888886531          122479


Q ss_pred             eEEEEcCCC
Q 025509           81 NILINNAGI   89 (251)
Q Consensus        81 d~lv~~ag~   89 (251)
                      |+|+....+
T Consensus       129 D~I~~~~~l  137 (222)
T d2ex4a1         129 DVIWIQWVI  137 (222)
T ss_dssp             EEEEEESCG
T ss_pred             ccccccccc
Confidence            999887653