Citrus Sinensis ID: 025559

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-
Protein Sequence
MGTGSSKEDSSSQLQPNEKPSQNESQNFAIAAKPADNTKETKVCEAKEAEVKLPHMYEAIVKDADSPIDKSSVDKLYDQLYYGVFLNQKSKKSGCNSFMLFSRALLITWAEDNRFWIWTPVKESSDDIVDVAELVQVCWLEIHARLDTTKLSPGISYEVLFVIMLKDPAYGWEVPVSLRLLLPNGTKQEHKENLIVKPRNQWIEIPVGEFKSTPENAGEMEISMYEYEGGKWKKGLVVKGVIIRPKNQALE
Secondary Structure (PSIPRED)
cccccccccccccccccccccHHHHHHHHHccccccccccccccccccccccccccHHHHHcccccccccccHHHHHHHHHccEEEcccccccccEEEEEEccccEEEEccccccEEEcccccccccHHHHHHEEEEEEEEEEEEEEccccccccEEEEEEEEEEcccccccccccEEEEEEccccEEEEEEEEEEcccccEEEEEccEEEEcccccEEEEEEEEEEEccEEEccEEEEEEEEEEcccccc
Secondary Structure Prediction (SSPRO)
cccccccccccccccccccccHHHHHHHHHHcccHHHHHHHHHcHHHHHHHcccHHHHHHccccccccccccHHHHHHHHHccccccccccccccEEEEEEcccEEEEEccccccEEEEcccccccccEEEEEEEEEEEEEEEEEEEccEcccccEEEEEEEEEEccccccccccEEEEEEEccccEEEEEEEEcccccccEEEEEEEEEEEccccccEEEEEEEEEcccccccEEEEEEEEEEccccccc
Coil and Loop (DISEMBL)
mgtgsskedsssqlqpnekpsqnesqnfaiaakpadntketkvCEAKEAEVKLPHMYEAIVkdadspidkssvdklyDQLYYGVFlnqkskksgcnsFMLFSRALLITWAEdnrfwiwtpvkessddIVDVAELVQVCWLEIHArldttklspgisYEVLFVIMLkdpaygwevpVSLRlllpngtkqehkenlivkprnqwieipvgefkstpenagEMEISMYEyeggkwkkgLVVKGviirpknqale
Flexible Loop (DISEMBL)
mgtgsskedsssqlqpnekpsqnesQNFAIAakpadntkeTKVCEAKEAEVKLPHMYEAIvkdadspidksSVDKLYDQLYYGVFLNQKSKKSGCNSFMLFSRALLITWAEDNRFWIWTPVKESSDDIVDVAELVQVCWLEIHarldttklspgISYEVLFVIMLKDPAYGWEVPVSLRLLLpngtkqehkenlivkprnqwieipvgefkstpenAGEMEISMYEYEGGKWKKGLVVKGVIIRPKNQALE
Low Complexity Region (SEG)
MGTGSSKEDSSSQLQPNEKPSQNESQNFAIAAKPADNTKETKVCEAKEAEVKLPHMYEAIVKDADSPIDKSSVDKLYDQLYYGVFLNQKSKKSGCNSFMLFSRALLITWAEDNRFWIWTPVKESSDDIVDVAELVQVCWLEIHARLDTTKLSPGISYEVLFVIMLKDPAYGWEVPVSLRLLLPNGTKQEHKENLIVKPRNQWIEIPVGEFKSTPENAGEMEISMYEYEggkwkkglvvkgvIIRPKNQALE
Disordered region (IsUnstruct)
***************************************************KLPHMYEAIVKD*******SSVDKLYDQLYYGVFLNQKSKKSGCNSFMLFSRALLITWAEDNRFWIWTPVKESSDDIVDVAELVQVCWLEIHARLDTTKLSPGISYEVLFVIMLKDPAYGWEVPVSLRLLLPNGTKQEHKENLIVKPRNQWIEIPVG*******************************************
Disordered Region (DISOPRED)
************************SQNFAIAAKPADNTKETKVCEAKEAEVKLPHMYEAIV***************YDQLYYGVFLNQKSKKSGCNSFMLFSRALLITWAEDNRFWIWTPVKESSDDIVDVAELVQVCWLEIHARLDTTKLSPGISYEVLFVIMLKDPAYGWEVPVSLRLLLP*************KPRNQWIEIPVGEFKSTPENAGEMEISMYEYEGGKWKKGLVVKGVII*PKN****
Disordered Region (DISEMBL)
************************SQNFAIAAKPADNTKETKVCEAKEAEVKLPHMYEAIVKDADSPIDKSSVDKLYDQLYYGVFLNQKSKKSGCNSFMLFSRALLITWAEDNRFWIWTPVKESSDDIVDVAELVQVCWLEIHARLDTTKLSPGISYEVLFVIMLKDPAYGWEVPVSLRLLLPNGTKQEHKENLIVKPRNQWIEIPVGEFKSTPENAGEMEISMYEYEGGKWKKGLVVKGVIIRPKNQALE
Disordered Region (DISPRO)
***************PNEKPSQNESQNFAIAAKPADNTKETKVCEAKEAEVKLPHMYEAIVKDADSPIDKSSVDKLYDQLYYGVFLNQKSKKSGCNSFMLFSRALLITWAEDNRFWIWTPVKESSDDIVDVAELVQVCWLEIHARLDTTKLSPGISYEVLFVIMLKDPAYGWEVPVSLRLLLPNGTKQEHKENLIVKPRNQWIEIPVGEFKSTPENAGEMEISMYEYEGGKWKKGLVVKGVIIRPKN****
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MGTGSSKEDSSSQLQPNEKPSQNESQNFAIAAKPADNTKETKVCEAKEAEVKLPHMYEAIVKDADSPIDKSSVDKLYDQLYYGVFLNQKSKKSGCNSFMLFSRALLITWAEDNRFWIWTPVKESSDDIVDVAELVQVCWLEIHARLDTTKLSPGISYEVLFVIMLKDPAYGWEVPVSLRLLLPNGTKQEHKENLIVKPRNQWIEIPVGEFKSTPENAGEMEISMYEYEGGKWKKGLVVKGVIIRPKNQALE
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	251	2.2.26 [Sep-21-2011]
O81865	246	Protein PHLOEM PROTEIN 2-	yes	no	0.920	0.939	0.448	4e-49
Q9C8U9	165	Uncharacterized protein P	no	no	0.593	0.903	0.431	2e-33
Q9C5Q9	411	Protein PHLOEM PROTEIN 2-	no	no	0.597	0.364	0.412	2e-28
O81866	194	Protein PHLOEM PROTEIN 2-	no	no	0.490	0.634	0.475	6e-28
O81025	463	Putative protein PHLOEM P	no	no	0.589	0.319	0.394	3e-24
Q9FHE5	332	Uncharacterized protein P	no	no	0.677	0.512	0.357	3e-23
Q9FHE8	392	Protein PHLOEM PROTEIN 2-	no	no	0.593	0.380	0.367	6e-19
Q949S5	257	F-box protein PP2-B11 OS=	no	no	0.597	0.583	0.321	3e-17
Q9FLU7	251	Putative F-box protein PP	no	no	0.577	0.577	0.327	9e-16
Q3E6P4	320	F-box protein At2g02240 O	no	no	0.836	0.656	0.296	1e-15

>sp|O81865|P2A01_ARATH Protein PHLOEM PROTEIN 2-LIKE A1 OS=Arabidopsis thaliana GN=PP2A1 PE=2 SV=1

 Score =  194 bits (494), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 109/243 (44%), Positives = 148/243 (60%), Gaps = 12/243 (4%)

Query: 12  SQLQPNEKPSQNESQNFAIAAKPADNTKETKVCEAKEAEVKLPHMYEAIVKDADSPIDKS 71
           S+L PN K  +N+   + I  +             K + VK PH  EAI++DAD PI  S
Sbjct: 7   SELLPN-KMFRNQDSKYLIPVQ--KEAPPVTTLPMKASTVKSPHNCEAILRDADPPISLS 63

Query: 72  SVDKLYDQLYYGVFLNQKSK------KSGCNSFMLFSRALLITWAEDNRFWIWTPVKESS 125
           SV+ L +QL  GVFL  K +      +   N FMLF++ L ITW++D  +W W   KES 
Sbjct: 64  SVN-LSEQLRSGVFLKPKKQIKYWVDERNSNCFMLFAKNLSITWSDDVNYWTWFTEKESP 122

Query: 126 DDIVDVAELVQVCWLEIHARLDTTKLSPGISYEVLFVIMLKDPAYGWEVPVSLRLLLPNG 185
           ++ V+   L  VCWL+I  + DT  L+PGI YEV+F + L+DPAYGW+ PV+L+L+LPNG
Sbjct: 123 NENVEAVGLKNVCWLDITGKFDTRNLTPGIVYEVVFKVKLEDPAYGWDTPVNLKLVLPNG 182

Query: 186 TK--QEHKENLIVKPRNQWIEIPVGEFKSTPENAGEMEISMYEYEGGKWKKGLVVKGVII 243
            +  QE K +L   PR +W+++ VGEF      AGE+  SMYE+  G WKKGL +KGV I
Sbjct: 183 KEKPQEKKVSLRELPRYKWVDVRVGEFVPEKSAAGEITFSMYEHAAGVWKKGLSLKGVAI 242

Query: 244 RPK 246
           RPK
Sbjct: 243 RPK 245

Arabidopsis thaliana (taxid: 3702)

>sp|Q9C8U9|P2A04_ARATH Uncharacterized protein PHLOEM PROTEIN 2-LIKE A4 OS=Arabidopsis thaliana GN=PP2A4 PE=4 SV=1

 Score =  142 bits (359), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 66/153 (43%), Positives = 105/153 (68%), Gaps = 4/153 (2%)

Query: 99  MLFSRALLITWAEDNRFWIWTPVKE--SSDDIVDVAELVQVCWLEIHARLDTTKLSPGIS 156
           M+++R L I W++ + +W W P++   SS+ +VD A L  VCWL+++ + DT +L+   +
Sbjct: 13  MIYARDLSIAWSDKDEYWSWLPLRYDISSEKLVDAAVLEAVCWLDVNGKFDTRELTLETT 72

Query: 157 YEVLFVIMLKDPAYGWEVPVSLRLLLPNGTKQEHKENLIVKPR--NQWIEIPVGEFKSTP 214
           YEV++V+ L+D A GW +PV+L+L LP+G K+  + ++ +K     +WI+I  GEF ++P
Sbjct: 73  YEVVYVVKLEDTASGWNIPVNLKLTLPDGKKRPQERSMCLKEHIGKRWIDISAGEFVTSP 132

Query: 215 ENAGEMEISMYEYEGGKWKKGLVVKGVIIRPKN 247
           +NAGE+  SMYE +   WK+GL VK V IRPKN
Sbjct: 133 DNAGEISFSMYETKSCCWKRGLFVKCVEIRPKN 165

Arabidopsis thaliana (taxid: 3702)

>sp|Q9C5Q9|P2A05_ARATH Protein PHLOEM PROTEIN 2-LIKE A5 OS=Arabidopsis thaliana GN=PP2A5 PE=2 SV=1

 Score =  126 bits (316), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 64/155 (41%), Positives = 97/155 (62%), Gaps = 5/155 (3%)

Query: 96  NSFMLFSRALLITWAEDNRFWIWTPV--KESSDDIVDVAELVQVCWLEIHARLDTTKLSP 153
           N FM+ +R L I W+ED+  W W P+  + S++ ++++A L    WL++  + DT  L+P
Sbjct: 257 NVFMIDARDLSIAWSEDSNHWTWLPLPNQNSNESVMEIAFLKSASWLDVAGKFDTRYLTP 316

Query: 154 GISYEVLFVIMLKDPAYGWEVPVSLRLLLPNGTK--QEHKENLIVKPRNQWIEIPVGEFK 211
              YEV+FV+ L +  + WE  V L+L LPN  +  QE   ++     +QW++IPVGEF 
Sbjct: 317 RTRYEVVFVVKL-EYTFEWETLVKLKLDLPNTWEKPQEQSVDMFDYISDQWLDIPVGEFT 375

Query: 212 STPENAGEMEISMYEYEGGKWKKGLVVKGVIIRPK 246
           ++ +N GE+  +MYE+E   WK GL VKGV IRPK
Sbjct: 376 TSKKNVGEISFAMYEHECQLWKSGLFVKGVTIRPK 410

Arabidopsis thaliana (taxid: 3702)

>sp|O81866|P2A02_ARATH Protein PHLOEM PROTEIN 2-LIKE A2 OS=Arabidopsis thaliana GN=PP2A2 PE=2 SV=1

 Score =  124 bits (311), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 59/124 (47%), Positives = 87/124 (70%), Gaps = 1/124 (0%)

Query: 125 SDDIVDVAELVQVCWLEIHARLDTTKLSPGISYEVLFVIMLKDPAYGWEVPVSLRLLLPN 184
           SD   +VA++ +V WLE+  + +T KL+P   YEV+FV+ L D A GW+  V+ +L+LP 
Sbjct: 71  SDVRTEVAKMERVAWLEVVGKFETEKLTPNSLYEVVFVVKLIDSAKGWDFRVNFKLVLPT 130

Query: 185 GTKQEHKENLIVKPRNQWIEIPVGEFKSTPEN-AGEMEISMYEYEGGKWKKGLVVKGVII 243
           G  +E +EN+ +  RN+W+EIP GEF  +PE+ +G++E SM E +  +WK GL+VKGV I
Sbjct: 131 GETKERRENVNLLERNKWVEIPAGEFMISPEHLSGKIEFSMLEVKSDQWKSGLIVKGVAI 190

Query: 244 RPKN 247
           RPKN
Sbjct: 191 RPKN 194

Arabidopsis thaliana (taxid: 3702)

>sp|O81025|P2A03_ARATH Putative protein PHLOEM PROTEIN 2-LIKE A3 OS=Arabidopsis thaliana GN=PP2A3 PE=4 SV=1

 Score =  112 bits (279), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 62/157 (39%), Positives = 86/157 (54%), Gaps = 9/157 (5%)

Query: 99  MLFSRALLITWAEDNRFWIWTPVKE--SSDDIVDVAELVQVCWLEIHARLDTTKLSPGIS 156
           M+ +R L I W+     W W  +    SS+  V+VAEL+ V W ++   LDTT+++P   
Sbjct: 308 MICARDLNIEWSHSEEHWKWVNLDHNISSNTFVEVAELLGVYWFDVSGSLDTTEMAPWTH 367

Query: 157 YEVLFVIMLKDPAYGWEVPVSLRLLLPN------GTKQEHKENLIVKPRNQWIEIPVGEF 210
           YEVLFV+ LKD A+ W   V + L   N      GT QE   ++       W+ I  GEF
Sbjct: 368 YEVLFVVNLKDSAFKWNAAVKMNLFYINSRPGGPGT-QERAVDMRQHIGKGWVTIHAGEF 426

Query: 211 KSTPENAGEMEISMYEYEGGKWKKGLVVKGVIIRPKN 247
            +TPEN G +   M E + G  + GL+VKGV+IRP N
Sbjct: 427 ITTPENVGLIGFRMSEVDSGDNRGGLIVKGVLIRPIN 463

Arabidopsis thaliana (taxid: 3702)

>sp|Q9FHE5|P2A07_ARATH Uncharacterized protein PHLOEM PROTEIN 2-LIKE A7 OS=Arabidopsis thaliana GN=PP2A7 PE=4 SV=1

 Score =  108 bits (270), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 64/179 (35%), Positives = 100/179 (55%), Gaps = 9/179 (5%)

Query: 73  VDKLYDQLYYGVFLNQKSKKSGCNSFMLFSRALLITWAEDNRFWIWTPVKESSDDI-VDV 131
           + KL   +  GV+   + K++    FM+ +R L ++ +E    W W+ + E+ +D  ++V
Sbjct: 155 MSKLLANISVGVY---REKEANSKCFMVPARKLQMSHSEKLINWTWSSIYETPNDAAIEV 211

Query: 132 AELVQVCWLEIHARLDTTKLSPGISYEVLFVIMLKDPAYGWEVPVSLRL--LLPNGTK-- 187
           A L +V WL +     T  L+PG  YEV+F++ L D + GWE PV+L L  + P+GT+  
Sbjct: 212 AMLNEVHWLHMSGNFHTRNLTPGTKYEVVFLVSLDDTSSGWEQPVNLNLKVINPDGTESL 271

Query: 188 QEHKENLIVKPRNQWIEIPVGEFKSTPEN-AGEMEISMYEYEGGKWKKGLVVKGVIIRP 245
           QE + +L       W++I  G   + P N A +M  +MY+Y     K GLVVKGV IRP
Sbjct: 272 QERETSLECHIGENWVDIQAGVLVAPPRNAAAKMTFTMYQYVTSDRKSGLVVKGVAIRP 330

Arabidopsis thaliana (taxid: 3702)

>sp|Q9FHE8|P2A06_ARATH Protein PHLOEM PROTEIN 2-LIKE A6 OS=Arabidopsis thaliana GN=PP2A6 PE=2 SV=1

 Score = 94.7 bits (234), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 57/155 (36%), Positives = 88/155 (56%), Gaps = 6/155 (3%)

Query: 99  MLFSRALLITWAEDNRFWIWTPVKESSDDI-VDVAELVQVCWLEIHARLDTTKLSPGISY 157
           M+ +R L IT +E  + W W+ + E+ +   +++A L +V WL+I   + T  L+PG  Y
Sbjct: 238 MVPARDLDITHSEKPQKWTWSTINEAPNSAEIEIATLNKVYWLKIVGTITTENLTPGAKY 297

Query: 158 EVLFVIMLKDPAYGWEVPVSLRLLL----PNGTKQEHKENLIVKPRNQWIEIPVGEFKST 213
           E +FV+ L++ A GWE PV+L+L +     +  + +  ENL       W++I  G F   
Sbjct: 298 EAVFVVKLENNASGWEQPVNLKLKVVQHDGDDDRVDRTENLNDYIGQNWVDILAGVFVVP 357

Query: 214 PENA-GEMEISMYEYEGGKWKKGLVVKGVIIRPKN 247
           P+     +  +MY+YE    KKGLVVKGV IRP N
Sbjct: 358 PKTTPATIIFTMYQYEDKYKKKGLVVKGVAIRPTN 392

Arabidopsis thaliana (taxid: 3702)

>sp|Q949S5|P2B11_ARATH F-box protein PP2-B11 OS=Arabidopsis thaliana GN=PP2B11 PE=1 SV=1

 Score = 89.0 bits (219), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 56/174 (32%), Positives = 86/174 (49%), Gaps = 24/174 (13%)

Query: 91  KKSGCNSFMLFSRALLITWAEDNRFWIWTPVKESSDDIVDVAELVQVCWLEIHARLDTTK 150
           +KSG   +M+ +RAL I W  + R+W W  +  +     +VAEL+ V WLEI  +++ T 
Sbjct: 87  RKSGNKCYMMAARALNIVWGHEQRYWHWISLPNTR--FGEVAELIMVWWLEITGKINITL 144

Query: 151 LSPGISYEVLFVIMLKDPAYGWEVPVSLRLLLPNGTKQEHKENLI--------------- 195
           LS    Y   FV       YG+  PV   L+L +    E  +N++               
Sbjct: 145 LSDDTLYAAYFVFKWNHSPYGFRQPVETSLVLAD---TESTDNVVQPSMISLMQDSGGEE 201

Query: 196 ----VKPRNQWIEIPVGEFKSTPENAGEMEISMYEYEGGKWKKGLVVKGVIIRP 245
               V  R+ W E+ +G+F     + GE+E+S+ E +G   KKGL+V G+ IRP
Sbjct: 202 GQSPVLRRDGWYEVELGQFFKRRGDLGEIEMSLKETKGPYEKKGLIVYGIEIRP 255

Component of SCF(ASK-cullin-F-box) E3 ubiquitin ligase complexes, which may mediate the ubiquitination and subsequent proteasomal degradation of target proteins.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9FLU7|P2B12_ARATH Putative F-box protein PP2-B12 OS=Arabidopsis thaliana GN=PP2B12 PE=4 SV=1

 Score = 84.0 bits (206), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 56/171 (32%), Positives = 93/171 (54%), Gaps = 26/171 (15%)

Query: 91  KKSGCNSFMLFSRALLITWAEDNRFWIWTPVKESSDDIVDVAELVQVCWLEIHARLDTTK 150
           K+SG   +ML +R L I W +   FWIW  + +S  +  +VA L+ VCW EI  ++ T+ 
Sbjct: 89  KRSGKKCWMLSARKLDIVWVDSPEFWIWVSIPDSRFE--EVAGLLMVCWFEIRGKISTSL 146

Query: 151 LSPGISYEVLFVIMLKD-PAYGWE-VPVSL-------------RLLLPNGTKQEHKENLI 195
           LS   +Y    V   ++  ++G+E +P+ +             R+ L +GT QE +E   
Sbjct: 147 LSKATNYSAYLVFKEQEMGSFGFESLPLEVSFRSTRTEVYNNRRVFLKSGT-QESRE--- 202

Query: 196 VKPRNQWIEIPVGEFKSTPENAGEMEISMYEYEGGKWKKGLVVKGVIIRPK 246
               + W+EI +GE+    ++  E+E+S+ E   G WK G++V+G+ IRPK
Sbjct: 203 ----DGWLEIELGEYYVGFDDE-EIEMSVLETREGGWKGGIIVQGIEIRPK 248

Arabidopsis thaliana (taxid: 3702)

>sp|Q3E6P4|FB95_ARATH F-box protein At2g02240 OS=Arabidopsis thaliana GN=At2g02240 PE=2 SV=1

 Score = 83.6 bits (205), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 72/243 (29%), Positives = 103/243 (42%), Gaps = 33/243 (13%)

Query: 29  AIAAKPADNTKETKVCEAKEAEVKLPHMYEAIVKDADSPIDKSSVDKLYDQLYYGVFLNQ 88
           A  A     T E+ V      +  LP  YE++V  +     K    +LY  L +   L +
Sbjct: 81  ACVAASVSKTFESAVSSDCVWDKFLPPEYESLVSRSRVFASK---KELYFALCHNPVLIE 137

Query: 89  KSKKS-------GCNSFMLFSRALLITWAEDNRFWIWTPVKESSDDIVDVAELVQVCWLE 141
             KKS       G    ML S+ L ITW     +W W  + ES  +   +AEL+ VCW E
Sbjct: 138 DGKKSFWLEKASGKRCIMLSSKELWITWGSSPEYWQWISIPESRFN--KIAELLDVCWFE 195

Query: 142 IHARLDTTKLSPGISYEVLFVIMLKD--PAYGWEVPVSLRLLL--------------PNG 185
           I  +     LSPG  Y    V   KD  P  G  +PV + L L              P  
Sbjct: 196 IRGKTSARVLSPGTRYSAYIVFKTKDRCPGLG-HLPVEVGLGLVGQESSKRFIYFIGPRD 254

Query: 186 TKQEHKENLIVKPRNQ---WIEIPVGEFKSTPENAGEMEISMYEYEGGKWKKGLVVKGVI 242
            +   +   + KP  +   W+E  +GEF +  E   E+E S+ E +   WK GL+++G+ 
Sbjct: 255 RRGRRETRDVTKPDQREDGWMEAELGEFFNE-ERCDEIEFSVIEIKSPSWKSGLIIQGIE 313

Query: 243 IRP 245
            RP
Sbjct: 314 FRP 316

Arabidopsis thaliana (taxid: 3702)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	251
297737969	239	unnamed protein product [Vitis vinifera]	0.932	0.979	0.571	6e-75
224115456	280	predicted protein [Populus trichocarpa]	0.984	0.882	0.517	2e-72
118486385	280	unknown [Populus trichocarpa]	0.984	0.882	0.514	7e-72
388506738	314	unknown [Lotus japonicus]	0.840	0.671	0.580	3e-70
357475181	293	F-box protein PP2-B10 [Medicago truncatu	0.784	0.672	0.605	2e-68
124359660	290	Galactose-binding like [Medicago truncat	0.784	0.679	0.61	2e-68
449455417	257	PREDICTED: protein PHLOEM PROTEIN 2-LIKE	0.780	0.762	0.553	4e-61
255566275	213	ATPP2-A2, putative [Ricinus communis] gi	0.764	0.901	0.572	8e-61
363807724	209	uncharacterized protein LOC100799048 [Gl	0.760	0.913	0.539	6e-56
115434638	244	Os01g0158400 [Oryza sativa Japonica Grou	0.749	0.770	0.5	5e-51

>gi|297737969|emb|CBI27170.3| unnamed protein product [Vitis vinifera]

 Score =  286 bits (732), Expect = 6e-75,   Method: Compositional matrix adjust.
 Identities = 144/252 (57%), Positives = 184/252 (73%), Gaps = 18/252 (7%)

Query: 1   MGTGSSKEDSSSQLQPNEKPSQNESQNFAIAAKPADNTKETKVCEAKEAEVKLPHMYEAI 60
           MG+  S+++SS   Q +EKP +  SQ   I      NTK  +  +AK+    LP+ Y AI
Sbjct: 1   MGSSWSQDESS---QLSEKPGETLSQTLDI------NTKAKETIQAKQ----LPYNYAAI 47

Query: 61  VKDADSPIDKSSVDKLYDQLYYGVFLNQKSKKSGC-----NSFMLFSRALLITWAEDNRF 115
           +KDADSPI++SS++KL DQLY GV LN   KK        N FM+F+R L ITWAED+R+
Sbjct: 48  MKDADSPINESSIEKLNDQLYAGVLLNGNRKKFWMEKKFNNCFMIFARNLSITWAEDSRY 107

Query: 116 WIWTPVKESSDDIVDVAELVQVCWLEIHARLDTTKLSPGISYEVLFVIMLKDPAYGWEVP 175
           W W  +KE+SD  VDVAEL+ VCWLE+H + +T KLSPGI Y+V FV+M+KDPAYGW VP
Sbjct: 108 WHWLKIKETSDVFVDVAELINVCWLEVHGKFETAKLSPGIMYKVAFVVMMKDPAYGWGVP 167

Query: 176 VSLRLLLPNGTKQEHKENLIVKPRNQWIEIPVGEFKSTPENAGEMEISMYEYEGGKWKKG 235
           V+L+L LP+G  QEHKENL  KP+ QWIEIPVG+F+++ EN GE+E S++EYEGG WK G
Sbjct: 168 VNLKLALPDGNTQEHKENLREKPKGQWIEIPVGQFQTSAENIGEIEFSLFEYEGGDWKSG 227

Query: 236 LVVKGVIIRPKN 247
           LVVKGVII+PKN
Sbjct: 228 LVVKGVIIQPKN 239

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224115456|ref|XP_002332139.1| predicted protein [Populus trichocarpa] gi|222875189|gb|EEF12320.1| predicted protein [Populus trichocarpa]

 Score =  278 bits (710), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 145/280 (51%), Positives = 182/280 (65%), Gaps = 33/280 (11%)

Query: 1   MGTGSSKEDSSSQLQPNEKPSQN--------------------------ESQNFAIAAKP 34
           MG GSS +++S   Q   +PS+                           E++   I  + 
Sbjct: 1   MGAGSSHDEASESQQTGGEPSRTRPQYNEETSTEAKQSETKLKTVEKAPEAKPLVIRQEK 60

Query: 35  ADNTKETKVCEAKEA-EVKLPHMYEAIVKDADSPIDKSSVDKLYDQLYYGVFLNQKSKK- 92
           A + K     +AK   EVKLPH  EAI++DADSP+D+SSVDKLYDQL  GVFLNQK KK 
Sbjct: 61  AADVKPLHDAKAKTVKEVKLPHNCEAILRDADSPVDRSSVDKLYDQLSTGVFLNQKRKKY 120

Query: 93  ---SGC--NSFMLFSRALLITWAEDNRFWIWTPVKESSDDIVDVAELVQVCWLEIHARLD 147
                C  N FMLF++ L ITW  D R+W W  + ES D  VDVAEL+ VCWLEI+ + +
Sbjct: 121 WVEKKCYRNCFMLFAKDLSITWGGDARYWKWPSICESGDVTVDVAELLDVCWLEIYGKFN 180

Query: 148 TTKLSPGISYEVLFVIMLKDPAYGWEVPVSLRLLLPNGTKQEHKENLIVKPRNQWIEIPV 207
           T  LSPGI YEV+FVI LKDPAYGW VPV++ L+LPNG KQE KE L  KPR QWIE+PV
Sbjct: 181 TKMLSPGILYEVVFVIKLKDPAYGWGVPVNVSLVLPNGYKQERKEKLQTKPREQWIEVPV 240

Query: 208 GEFKSTPENAGEMEISMYEYEGGKWKKGLVVKGVIIRPKN 247
           GEF ++PEN GE++  M+EY+GG+WK+GLV+KG+ IRPK 
Sbjct: 241 GEFITSPENVGEIQFGMHEYDGGEWKRGLVIKGIAIRPKT 280

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|118486385|gb|ABK95033.1| unknown [Populus trichocarpa]

 Score =  276 bits (705), Expect = 7e-72,   Method: Compositional matrix adjust.
 Identities = 144/280 (51%), Positives = 181/280 (64%), Gaps = 33/280 (11%)

Query: 1   MGTGSSKEDSSSQLQPNEKPSQN--------------------------ESQNFAIAAKP 34
           MG GSS +++S   Q   +PS+                           E++   I  + 
Sbjct: 1   MGAGSSHDEASESQQTGGEPSRTRPQYNEETSTEAKQSETKLKTVEKAPEAKPLVIRQEK 60

Query: 35  ADNTKETKVCEAKEA-EVKLPHMYEAIVKDADSPIDKSSVDKLYDQLYYGVFLNQKSKK- 92
           A + K     +AK   EVKLPH  EAI++DADSP+D+SSVDKLYDQL  GVFLNQK KK 
Sbjct: 61  AADVKPLHDAKAKTVKEVKLPHNCEAILRDADSPVDRSSVDKLYDQLSTGVFLNQKRKKY 120

Query: 93  ---SGC--NSFMLFSRALLITWAEDNRFWIWTPVKESSDDIVDVAELVQVCWLEIHARLD 147
                C  N FMLF++ L ITW  D R+W W  + ES D  VDVAEL+ VCWLEI+ + +
Sbjct: 121 WVEKKCYRNCFMLFAKDLSITWGGDTRYWKWPSICESGDVTVDVAELLDVCWLEIYGKFN 180

Query: 148 TTKLSPGISYEVLFVIMLKDPAYGWEVPVSLRLLLPNGTKQEHKENLIVKPRNQWIEIPV 207
           T  LSPGI YEV+FVI LKDPAYGW VPV++ L+LPNG KQE KE L  KPR QWIE+PV
Sbjct: 181 TKMLSPGILYEVVFVIKLKDPAYGWGVPVNVSLVLPNGYKQERKEKLQTKPREQWIEVPV 240

Query: 208 GEFKSTPENAGEMEISMYEYEGGKWKKGLVVKGVIIRPKN 247
           GE  ++PEN GE++  M+EY+GG+WK+GLV+KG+ IRPK 
Sbjct: 241 GELITSPENVGEIQFGMHEYDGGEWKRGLVIKGIAIRPKT 280

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388506738|gb|AFK41435.1| unknown [Lotus japonicus]

 Score =  270 bits (691), Expect = 3e-70,   Method: Compositional matrix adjust.
 Identities = 126/217 (58%), Positives = 160/217 (73%), Gaps = 6/217 (2%)

Query: 37  NTKETKVCEAKEAEVKLPHMYEAIVKDADSPIDKSSVDKLYDQLYYGVFLNQKSKK---- 92
           N  ++ +      E+  PH YE I+K ADSPIDKSS +KL DQLY GVFL+ K+KK    
Sbjct: 98  NENQSMISVKPRKELNFPHNYEHILKGADSPIDKSSREKLCDQLYAGVFLDHKTKKYWLE 157

Query: 93  --SGCNSFMLFSRALLITWAEDNRFWIWTPVKESSDDIVDVAELVQVCWLEIHARLDTTK 150
             S  N FML++RAL ITWAED  +W W P  + S  +++VAEL +VCWLE+H + DT K
Sbjct: 158 RNSNSNCFMLYARALSITWAEDQNYWKWVPQNDESGTMIEVAELNRVCWLEVHGKFDTRK 217

Query: 151 LSPGISYEVLFVIMLKDPAYGWEVPVSLRLLLPNGTKQEHKENLIVKPRNQWIEIPVGEF 210
           LSPGI Y V F++MLKDPA GWE+PV++RL+LP G KQ+H ENL+ K R +WIEIPVGEF
Sbjct: 218 LSPGILYNVSFIVMLKDPAQGWEIPVNVRLVLPGGKKQQHNENLMDKLRARWIEIPVGEF 277

Query: 211 KSTPENAGEMEISMYEYEGGKWKKGLVVKGVIIRPKN 247
            ++ ++ GEMEISMYEYEGG WK GLV+KG+ I+PKN
Sbjct: 278 VASEKDGGEMEISMYEYEGGMWKMGLVIKGISIKPKN 314

Source: Lotus japonicus

Species: Lotus japonicus

Genus: Lotus

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357475181|ref|XP_003607876.1| F-box protein PP2-B10 [Medicago truncatula] gi|355508931|gb|AES90073.1| F-box protein PP2-B10 [Medicago truncatula] gi|388501714|gb|AFK38923.1| unknown [Medicago truncatula]

 Score =  264 bits (675), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 123/203 (60%), Positives = 157/203 (77%), Gaps = 6/203 (2%)

Query: 50  EVKLPHMYEAIVKDADSPIDKSSVDKLYDQLYYGVFLNQKSKK------SGCNSFMLFSR 103
           E+ L H YE I+KDADSP+DKSS +K+ DQLY GVFL+ K+KK      S  N FML++R
Sbjct: 88  ELSLSHNYEHILKDADSPVDKSSREKMCDQLYAGVFLHHKTKKYWVEKNSKANCFMLYAR 147

Query: 104 ALLITWAEDNRFWIWTPVKESSDDIVDVAELVQVCWLEIHARLDTTKLSPGISYEVLFVI 163
           AL ITWAED  +W W   K+ S+   +VAEL +VCWLE+H + DT KLSPGI Y+V F+I
Sbjct: 148 ALSITWAEDPNYWKWIQQKDVSEGTTEVAELKRVCWLEVHGKFDTRKLSPGILYQVSFII 207

Query: 164 MLKDPAYGWEVPVSLRLLLPNGTKQEHKENLIVKPRNQWIEIPVGEFKSTPENAGEMEIS 223
           MLKDPA GWE+PV++RL+LP G KQ+HKENL+ K R +WIE+PVGEF  + ++ GEMEIS
Sbjct: 208 MLKDPAQGWELPVNVRLVLPGGKKQQHKENLMEKLRARWIEVPVGEFVVSEKDGGEMEIS 267

Query: 224 MYEYEGGKWKKGLVVKGVIIRPK 246
           M+EYEGG WK+GLV+KG+ I+PK
Sbjct: 268 MFEYEGGMWKQGLVIKGIAIKPK 290

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|124359660|gb|ABN06032.1| Galactose-binding like [Medicago truncatula]

 Score =  264 bits (675), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 122/200 (61%), Positives = 156/200 (78%), Gaps = 3/200 (1%)

Query: 50  EVKLPHMYEAIVKDADSPIDKSSVDKLYDQLYYGVFLNQKSK---KSGCNSFMLFSRALL 106
           E+ L H YE I+KDADSP+DKSS +K+ DQLY GVFL+ K+K    S  N FML++RAL 
Sbjct: 88  ELSLSHNYEHILKDADSPVDKSSREKMCDQLYAGVFLHHKTKAKKNSKANCFMLYARALS 147

Query: 107 ITWAEDNRFWIWTPVKESSDDIVDVAELVQVCWLEIHARLDTTKLSPGISYEVLFVIMLK 166
           ITWAED  +W W   K+ S+   +VAEL +VCWLE+H + DT KLSPGI Y+V F+IMLK
Sbjct: 148 ITWAEDPNYWKWIQQKDVSEGTTEVAELKRVCWLEVHGKFDTRKLSPGILYQVSFIIMLK 207

Query: 167 DPAYGWEVPVSLRLLLPNGTKQEHKENLIVKPRNQWIEIPVGEFKSTPENAGEMEISMYE 226
           DPA GWE+PV++RL+LP G KQ+HKENL+ K R +WIE+PVGEF  + ++ GEMEISM+E
Sbjct: 208 DPAQGWELPVNVRLVLPGGKKQQHKENLMEKLRARWIEVPVGEFVVSEKDGGEMEISMFE 267

Query: 227 YEGGKWKKGLVVKGVIIRPK 246
           YEGG WK+GLV+KG+ I+PK
Sbjct: 268 YEGGMWKQGLVIKGIAIKPK 287

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449455417|ref|XP_004145449.1| PREDICTED: protein PHLOEM PROTEIN 2-LIKE A1-like [Cucumis sativus]

 Score =  240 bits (612), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 113/204 (55%), Positives = 155/204 (75%), Gaps = 8/204 (3%)

Query: 50  EVKLPHMYEAIVKDADSPIDKSSVDKLYDQLYYGVFLNQKSKKS------GCNSFMLFSR 103
           E+K+ H  E I+KDAD P+D+SS+DKLY+QLY G+FLN+++KK         N FMLF R
Sbjct: 54  EMKVGHGIEDILKDADLPVDRSSLDKLYEQLYVGIFLNKRTKKYWLDKKLKSNCFMLFPR 113

Query: 104 ALLITWAEDNRFWIWTPVKESSDDIVDVAELVQVCWLEIHARLDTTKLSPGISYEVLFVI 163
           AL ITWAE+N++W W  +++SS+ I +V EL+ VCWLEIH ++ T +LSPGI YE  F +
Sbjct: 114 ALSITWAEENKYWRWRSLQDSSNTI-EVVELMNVCWLEIHGKMKTCELSPGICYEAAFEV 172

Query: 164 MLKDPAYGWEVPVSLRLLLPNGTKQEHKENLIVKPRNQWIEIPVGEFKSTP-ENAGEMEI 222
           M+KDP+YGW++PV++RL  P+G+KQEHKENL  +PR +W EIP+G+F     E  GE++ 
Sbjct: 173 MIKDPSYGWDIPVNIRLQKPDGSKQEHKENLEQRPRGRWFEIPIGDFIVLDHEKEGEIDF 232

Query: 223 SMYEYEGGKWKKGLVVKGVIIRPK 246
           SM+EYEGG WKKG+V+KG+ IR K
Sbjct: 233 SMFEYEGGMWKKGIVLKGLSIRSK 256

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255566275|ref|XP_002524124.1| ATPP2-A2, putative [Ricinus communis] gi|223536591|gb|EEF38235.1| ATPP2-A2, putative [Ricinus communis]

 Score =  239 bits (610), Expect = 8e-61,   Method: Compositional matrix adjust.
 Identities = 127/222 (57%), Positives = 154/222 (69%), Gaps = 30/222 (13%)

Query: 32  AKPADNTKETKVCEAKEAE--VKLPHMYEAIVKDAD-SPIDKSSVDK-LYDQLYYGVFLN 87
           AK ++ T+E +  E +     VKLP+ YE+I+++AD +  D S+ DK LYDQL +GVFLN
Sbjct: 11  AKESEYTEEKREVENENDAQVVKLPYNYESILREADPTSDDTSATDKQLYDQLCHGVFLN 70

Query: 88  QKSKKSGCN-SFMLFSRALLITWAEDNRFWIWTPVKESSDDIVDVAELVQVCWLEIHARL 146
           QK K    N SF                          S+  VDVAEL+ VCWLEIH R 
Sbjct: 71  QKKKAIHKNFSF-------------------------DSNVFVDVAELLNVCWLEIHGRF 105

Query: 147 DTTKLSPGISYEVLFVIMLKDPAYGWEVPVSLRLLLPNGTKQEHKENLIVKPRNQWIEIP 206
           DT KLSPGI YE +F+IMLKDPAYGWEVPV+LRL LPNGTKQEHKE ++ KPR QWIE+P
Sbjct: 106 DTAKLSPGILYEAVFLIMLKDPAYGWEVPVNLRLTLPNGTKQEHKEYVVTKPRAQWIEVP 165

Query: 207 VGEFKSTPENAGEMEISMYEYEGGKWKKGLVVKGVIIRPKNQ 248
            GEF S+P+N G +EISMY+YEGGKWK+GLVVKGV +RPKNQ
Sbjct: 166 AGEFVSSPDNIGRIEISMYDYEGGKWKRGLVVKGVTLRPKNQ 207

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|363807724|ref|NP_001242170.1| uncharacterized protein LOC100799048 [Glycine max] gi|255640828|gb|ACU20697.1| unknown [Glycine max]

 Score =  223 bits (568), Expect = 6e-56,   Method: Compositional matrix adjust.
 Identities = 109/202 (53%), Positives = 147/202 (72%), Gaps = 11/202 (5%)

Query: 53  LPHMYEAIVK-DADSPIDKSSVDKLYDQLYYGVFLNQKSKK------SGCNSFMLFSRAL 105
           +PH YE I+K +ADSP+DKS    L D+LY GVFL+ K+KK      S  N FML++RAL
Sbjct: 12  IPHNYEHILKSNADSPVDKS----LLDKLYAGVFLDHKTKKYWVEKKSNGNCFMLYARAL 67

Query: 106 LITWAEDNRFWIWTPVKESSDDIVDVAELVQVCWLEIHARLDTTKLSPGISYEVLFVIML 165
            ITWAE+  +W W   KE S  ++++A+L  VCWLE++ +  T  LSPGI Y+V F++ML
Sbjct: 68  SITWAENPNYWKWVQHKEESGSMIELAKLKTVCWLEVNGKFGTGMLSPGILYQVSFIVML 127

Query: 166 KDPAYGWEVPVSLRLLLPNGTKQEHKENLIVKPRNQWIEIPVGEFKSTPENAGEMEISMY 225
           KD A GWE+P+++RL+LP G KQ+H+ENL+ K R  WIEI VGEF ++ ++ GEMEISMY
Sbjct: 128 KDSAQGWELPINVRLVLPGGKKQQHEENLMEKSRESWIEILVGEFVASEKDVGEMEISMY 187

Query: 226 EYEGGKWKKGLVVKGVIIRPKN 247
           E+E G WK GLV++ V I+PKN
Sbjct: 188 EHESGMWKTGLVIESVAIKPKN 209

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|115434638|ref|NP_001042077.1| Os01g0158400 [Oryza sativa Japonica Group] gi|54290191|dbj|BAD61079.1| putative lectin 2 [Oryza sativa Japonica Group] gi|113531608|dbj|BAF03991.1| Os01g0158400 [Oryza sativa Japonica Group] gi|215686620|dbj|BAG88873.1| unnamed protein product [Oryza sativa Japonica Group]

 Score =  206 bits (525), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 102/204 (50%), Positives = 136/204 (66%), Gaps = 16/204 (7%)

Query: 55  HMYEAIVKDADSPIDKSSVDKLYDQLYYGVFLNQKSKK------SGCNSFMLFSRALLIT 108
           HM++ IV + D      +   L DQ+Y G+FL  K+KK      +  N FMLF R L IT
Sbjct: 46  HMFQEIVAEKDF-----TASSLEDQIYTGIFLAGKTKKYWVDERTRNNCFMLFPRGLSIT 100

Query: 109 WAEDNRFWIWTPVKESSDDI-----VDVAELVQVCWLEIHARLDTTKLSPGISYEVLFVI 163
           W+ED RFW W P+KE S D      ++V  L  VCWLEIH +L+ + L+PG++YEVLF +
Sbjct: 101 WSEDPRFWTWKPLKEGSSDADTDTQIEVPSLQNVCWLEIHGKLERSYLTPGVTYEVLFEV 160

Query: 164 MLKDPAYGWEVPVSLRLLLPNGTKQEHKENLIVKPRNQWIEIPVGEFKSTPENAGEMEIS 223
           ML DPAYGW VPV+L+L  P+GT Q+ KENL  K R +W+E+ VGE K+     GE+EIS
Sbjct: 161 MLIDPAYGWSVPVNLQLKFPDGTVQQRKENLEEKIRMKWLELKVGEVKTQQGQKGEIEIS 220

Query: 224 MYEYEGGKWKKGLVVKGVIIRPKN 247
           M+EY+GG WK+GL++KG+ I PK 
Sbjct: 221 MFEYDGGLWKRGLLIKGIKILPKQ 244

Source: Oryza sativa Japonica Group

Species: Oryza sativa

Genus: Oryza

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	251
TAIR|locus:2133945	246	PP2-A1 "phloem protein 2-A1" [	0.920	0.939	0.411	1.5e-42
TAIR|locus:2203837	165	PP2-A4 "phloem protein 2-A4" [	0.593	0.903	0.385	1.2e-28
TAIR|locus:2206255	411	PP2-A5 "phloem protein 2 A5" [	0.597	0.364	0.361	8e-24
TAIR|locus:2153222	332	PP2-A7 "phloem protein 2-A7" [	0.713	0.539	0.324	5.7e-20
TAIR|locus:2039528	463	PP2-A3 "phloem protein 2-A3" [	0.960	0.520	0.284	4e-19
TAIR|locus:2153217	392	PP2-A6 "phloem protein 2-A6" [	0.593	0.380	0.322	4.7e-15
TAIR|locus:2016349	257	PP2-B11 "phloem protein 2-B11"	0.685	0.669	0.288	3.4e-13
TAIR|locus:2056181	320	MEE66 "AT2G02240" [Arabidopsis	0.661	0.518	0.307	3.3e-12
TAIR|locus:2056231	272	PP2-B10 "phloem protein 2-B10"	0.693	0.639	0.299	9.2e-12
TAIR|locus:2153954	251	PP2-B12 "phloem protein 2-B12"	0.609	0.609	0.288	3.9e-11

TAIR|locus:2133945 PP2-A1 "phloem protein 2-A1" [Arabidopsis thaliana (taxid:3702)]

 Score = 450 (163.5 bits), Expect = 1.5e-42, P = 1.5e-42
 Identities = 100/243 (41%), Positives = 138/243 (56%)

Query:    12 SQLQPNEKPSQNESQNFAIAAKPADNTKETKVCEAKEAEVKLPHMYEAIVKDADSPIDKS 71
             S+L PN K  +N+   + I  +             K + VK PH  EAI++DAD PI  S
Sbjct:     7 SELLPN-KMFRNQDSKYLIPVQK--EAPPVTTLPMKASTVKSPHNCEAILRDADPPISLS 63

Query:    72 SVDKLYDQLYYGVFLNQKSK------KSGCNSFMLFSRALLITWAEDNRFWIWTPVKESS 125
             SV+ L +QL  GVFL  K +      +   N FMLF++ L ITW++D  +W W   KES 
Sbjct:    64 SVN-LSEQLRSGVFLKPKKQIKYWVDERNSNCFMLFAKNLSITWSDDVNYWTWFTEKESP 122

Query:   126 DDIVDVAELVQVCWLEIHARLDTTKLSPGISYEVLFVIMLKDPAYGWEVPVSLRLLLPNG 185
             ++ V+   L  VCWL+I  + DT  L+PGI YEV+F + L+DPAYGW+ PV+L+L+LPNG
Sbjct:   123 NENVEAVGLKNVCWLDITGKFDTRNLTPGIVYEVVFKVKLEDPAYGWDTPVNLKLVLPNG 182

Query:   186 TK--QEHKENLIVKPRNQWIEIPVGEFKSTPENAGEMEISMYEYEXXXXXXXXXXXXXII 243
              +  QE K +L   PR +W+++ VGEF      AGE+  SMYE+               I
Sbjct:   183 KEKPQEKKVSLRELPRYKWVDVRVGEFVPEKSAAGEITFSMYEHAAGVWKKGLSLKGVAI 242

Query:   244 RPK 246
             RPK
Sbjct:   243 RPK 245

GO:0005634 "nucleus" evidence=ISM

GO:0030246 "carbohydrate binding" evidence=ISS

GO:0009625 "response to insect" evidence=IDA

GO:0043394 "proteoglycan binding" evidence=IDA

GO:0006612 "protein targeting to membrane" evidence=RCA

GO:0006833 "water transport" evidence=RCA

GO:0009651 "response to salt stress" evidence=RCA

GO:0009750 "response to fructose stimulus" evidence=RCA

GO:0009963 "positive regulation of flavonoid biosynthetic process" evidence=RCA

GO:0010363 "regulation of plant-type hypersensitive response" evidence=RCA

TAIR|locus:2203837 PP2-A4 "phloem protein 2-A4" [Arabidopsis thaliana (taxid:3702)]

 Score = 319 (117.4 bits), Expect = 1.2e-28, P = 1.2e-28
 Identities = 59/153 (38%), Positives = 97/153 (63%)

Query:    99 MLFSRALLITWAEDNRFWIWTPVKE--SSDDIVDVAELVQVCWLEIHARLDTTKLSPGIS 156
             M+++R L I W++ + +W W P++   SS+ +VD A L  VCWL+++ + DT +L+   +
Sbjct:    13 MIYARDLSIAWSDKDEYWSWLPLRYDISSEKLVDAAVLEAVCWLDVNGKFDTRELTLETT 72

Query:   157 YEVLFVIMLKDPAYGWEVPVSLRLLLPNGTKQEHKENLIVKPR--NQWIEIPVGEFKSTP 214
             YEV++V+ L+D A GW +PV+L+L LP+G K+  + ++ +K     +WI+I  GEF ++P
Sbjct:    73 YEVVYVVKLEDTASGWNIPVNLKLTLPDGKKRPQERSMCLKEHIGKRWIDISAGEFVTSP 132

Query:   215 ENAGEMEISMYEYEXXXXXXXXXXXXXIIRPKN 247
             +NAGE+  SMYE +              IRPKN
Sbjct:   133 DNAGEISFSMYETKSCCWKRGLFVKCVEIRPKN 165

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0030246 "carbohydrate binding" evidence=ISS

TAIR|locus:2206255 PP2-A5 "phloem protein 2 A5" [Arabidopsis thaliana (taxid:3702)]

 Score = 274 (101.5 bits), Expect = 8.0e-24, P = 8.0e-24
 Identities = 56/155 (36%), Positives = 89/155 (57%)

Query:    96 NSFMLFSRALLITWAEDNRFWIWTPV--KESSDDIVDVAELVQVCWLEIHARLDTTKLSP 153
             N FM+ +R L I W+ED+  W W P+  + S++ ++++A L    WL++  + DT  L+P
Sbjct:   257 NVFMIDARDLSIAWSEDSNHWTWLPLPNQNSNESVMEIAFLKSASWLDVAGKFDTRYLTP 316

Query:   154 GISYEVLFVIMLKDPAYGWEVPVSLRLLLPNGTK--QEHKENLIVKPRNQWIEIPVGEFK 211
                YEV+FV+ L +  + WE  V L+L LPN  +  QE   ++     +QW++IPVGEF 
Sbjct:   317 RTRYEVVFVVKL-EYTFEWETLVKLKLDLPNTWEKPQEQSVDMFDYISDQWLDIPVGEFT 375

Query:   212 STPENAGEMEISMYEYEXXXXXXXXXXXXXIIRPK 246
             ++ +N GE+  +MYE+E              IRPK
Sbjct:   376 TSKKNVGEISFAMYEHECQLWKSGLFVKGVTIRPK 410

GO:0005622 "intracellular" evidence=IEA

GO:0006952 "defense response" evidence=ISS

GO:0007165 "signal transduction" evidence=IEA

GO:0009507 "chloroplast" evidence=ISM

GO:0030246 "carbohydrate binding" evidence=ISS

TAIR|locus:2153222 PP2-A7 "phloem protein 2-A7" [Arabidopsis thaliana (taxid:3702)]

 Score = 237 (88.5 bits), Expect = 5.7e-20, P = 5.7e-20
 Identities = 62/191 (32%), Positives = 99/191 (51%)

Query:    62 KDA-DSPIDKSSVDKLYDQLYYGVFLNQKSKKSGCNSFMLFSRALLITWAEDNRFWIWTP 120
             KD  +S +++ S  KL   +  GV+  +K   S C  FM+ +R L ++ +E    W W+ 
Sbjct:   145 KDLINSAVEEMS--KLLANISVGVY-REKEANSKC--FMVPARKLQMSHSEKLINWTWSS 199

Query:   121 VKESSDDI-VDVAELVQVCWLEIHARLDTTKLSPGISYEVLFVIMLKDPAYGWEVPVSLR 179
             + E+ +D  ++VA L +V WL +     T  L+PG  YEV+F++ L D + GWE PV+L 
Sbjct:   200 IYETPNDAAIEVAMLNEVHWLHMSGNFHTRNLTPGTKYEVVFLVSLDDTSSGWEQPVNLN 259

Query:   180 LLL--PNGTK--QEHKENLIVKPRNQWIEIPVGEFKSTPENAG-EMEISMYEYEXXXXXX 234
             L +  P+GT+  QE + +L       W++I  G   + P NA  +M  +MY+Y       
Sbjct:   260 LKVINPDGTESLQERETSLECHIGENWVDIQAGVLVAPPRNAAAKMTFTMYQYVTSDRKS 319

Query:   235 XXXXXXXIIRP 245
                     IRP
Sbjct:   320 GLVVKGVAIRP 330

GO:0005622 "intracellular" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006952 "defense response" evidence=ISS

GO:0007165 "signal transduction" evidence=IEA

GO:0030246 "carbohydrate binding" evidence=ISS

TAIR|locus:2039528 PP2-A3 "phloem protein 2-A3" [Arabidopsis thaliana (taxid:3702)]

 Score = 235 (87.8 bits), Expect = 4.0e-19, P = 4.0e-19
 Identities = 72/253 (28%), Positives = 119/253 (47%)

Query:     7 KEDSSSQLQPNEKPSQNESQNFAIAAKPADNT-KETKVCEAKEAEVK-LPHMYEAIVKDA 64
             KE++  +L+  E+  +++++  A  A+   N   E +  + +EA+ K L    EA  K  
Sbjct:   211 KEENDERLREEERVIESKNRAEAELAEMQQNLLMEKEKLQMEEAKNKQLIAQAEANEKLM 270

Query:    65 DSPIDKSSVD-KLYDQLYYGVFLNQKSKKS--GCNSFMLFSRALLITWAEDNRFWIWTPV 121
             +    K+  + +L   +   + + ++  K      + M+ +R L I W+     W W  +
Sbjct:   271 EQERAKNRAETELAAVMVEKLQMEEEKNKQLIAQANRMICARDLNIEWSHSEEHWKWVNL 330

Query:   122 KE--SSDDIVDVAELVQVCWLEIHARLDTTKLSPGISYEVLFVIMLKDPAYGWEVPVSLR 179
                 SS+  V+VAEL+ V W ++   LDTT+++P   YEVLFV+ LKD A+ W   V + 
Sbjct:   331 DHNISSNTFVEVAELLGVYWFDVSGSLDTTEMAPWTHYEVLFVVNLKDSAFKWNAAVKMN 390

Query:   180 LLL----PNGT-KQEHKENLIVKPRNQWIEIPVGEFKSTPENAGEMEISMYEYEXXXXXX 234
             L      P G   QE   ++       W+ I  GEF +TPEN G +   M E +      
Sbjct:   391 LFYINSRPGGPGTQERAVDMRQHIGKGWVTIHAGEFITTPENVGLIGFRMSEVDSGDNRG 450

Query:   235 XXXXXXXIIRPKN 247
                    +IRP N
Sbjct:   451 GLIVKGVLIRPIN 463

GO:0005525 "GTP binding" evidence=IEA

GO:0005739 "mitochondrion" evidence=ISM

GO:0009617 "response to bacterium" evidence=ISS

GO:0030246 "carbohydrate binding" evidence=ISS

GO:0006826 "iron ion transport" evidence=RCA

GO:0006897 "endocytosis" evidence=RCA

GO:0010106 "cellular response to iron ion starvation" evidence=RCA

GO:0010167 "response to nitrate" evidence=RCA

GO:0015706 "nitrate transport" evidence=RCA

TAIR|locus:2153217 PP2-A6 "phloem protein 2-A6" [Arabidopsis thaliana (taxid:3702)]

 Score = 196 (74.1 bits), Expect = 4.7e-15, P = 4.7e-15
 Identities = 50/155 (32%), Positives = 80/155 (51%)

Query:    99 MLFSRALLITWAEDNRFWIWTPVKESSDDI-VDVAELVQVCWLEIHARLDTTKLSPGISY 157
             M+ +R L IT +E  + W W+ + E+ +   +++A L +V WL+I   + T  L+PG  Y
Sbjct:   238 MVPARDLDITHSEKPQKWTWSTINEAPNSAEIEIATLNKVYWLKIVGTITTENLTPGAKY 297

Query:   158 EVLFVIMLKDPAYGWEVPVSLRLLLP--NGT--KQEHKENLIVKPRNQWIEIPVGEFKST 213
             E +FV+ L++ A GWE PV+L+L +   +G   + +  ENL       W++I  G F   
Sbjct:   298 EAVFVVKLENNASGWEQPVNLKLKVVQHDGDDDRVDRTENLNDYIGQNWVDILAGVFVVP 357

Query:   214 PENAGEMEI-SMYEYEXXXXXXXXXXXXXIIRPKN 247
             P+      I +MY+YE              IRP N
Sbjct:   358 PKTTPATIIFTMYQYEDKYKKKGLVVKGVAIRPTN 392

GO:0005622 "intracellular" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0006952 "defense response" evidence=ISS

GO:0007165 "signal transduction" evidence=IEA

GO:0030246 "carbohydrate binding" evidence=ISS

TAIR|locus:2016349 PP2-B11 "phloem protein 2-B11" [Arabidopsis thaliana (taxid:3702)]

 Score = 174 (66.3 bits), Expect = 3.4e-13, P = 3.4e-13
 Identities = 56/194 (28%), Positives = 87/194 (44%)

Query:    53 LPHMYEA-IVKDADSPIDKSSVDKLYDQ--LYYGVFLN-QKSKKSGCNSFMLFSRALLIT 108
             LP  + A     A  P  K     L D   L  G  L+    +KSG   +M+ +RAL I 
Sbjct:    45 LPADFPAGFAAPAGLPTRKQLFFSLVDNPLLINGTLLSFSLERKSGNKCYMMAARALNIV 104

Query:   109 WAEDNRFWIWTPVKESSDDIVDVAELVQVCWLEIHARLDTTKLSPGISYEVLFVIMLKDP 168
             W  + R+W W  +  +     +VAEL+ V WLEI  +++ T LS    Y   FV      
Sbjct:   105 WGHEQRYWHWISLPNTR--FGEVAELIMVWWLEITGKINITLLSDDTLYAAYFVFKWNHS 162

Query:   169 AYGWEVPVSLRLLLPNGTKQEH--KENLI--------------VKPRNQWIEIPVGEFKS 212
              YG+  PV   L+L +    ++  + ++I              V  R+ W E+ +G+F  
Sbjct:   163 PYGFRQPVETSLVLADTESTDNVVQPSMISLMQDSGGEEGQSPVLRRDGWYEVELGQFFK 222

Query:   213 TPENAGEMEISMYE 226
                + GE+E+S+ E
Sbjct:   223 RRGDLGEIEMSLKE 236

GO:0005634 "nucleus" evidence=ISM;IDA

GO:0030246 "carbohydrate binding" evidence=ISS

TAIR|locus:2056181 MEE66 "AT2G02240" [Arabidopsis thaliana (taxid:3702)]

 Score = 162 (62.1 bits), Expect = 3.3e-12, Sum P(2) = 3.3e-12
 Identities = 56/182 (30%), Positives = 79/182 (43%)

Query:    29 AIAAKPADNTKETKVCEAKEAEVKLPHMYEAIVKDADSPIDKSSVDKLYDQLYYGVFLNQ 88
             A  A     T E+ V      +  LP  YE++V  + S +  S  + LY  L +   L +
Sbjct:    81 ACVAASVSKTFESAVSSDCVWDKFLPPEYESLV--SRSRVFASKKE-LYFALCHNPVLIE 137

Query:    89 KSKKS-------GCNSFMLFSRALLITWAEDNRFWIWTPVKESSDDIVDVAELVQVCWLE 141
               KKS       G    ML S+ L ITW     +W W  + ES  +   +AEL+ VCW E
Sbjct:   138 DGKKSFWLEKASGKRCIMLSSKELWITWGSSPEYWQWISIPESRFN--KIAELLDVCWFE 195

Query:   142 IHARLDTTKLSPGISYEVLFVIMLKD--PAYGWEVPVSLRLLLPNGTKQEHKENLIVKPR 199
             I  +     LSPG  Y    V   KD  P  G  +PV + L L  G +   +    + PR
Sbjct:   196 IRGKTSARVLSPGTRYSAYIVFKTKDRCPGLG-HLPVEVGLGLV-GQESSKRFIYFIGPR 253

Query:   200 NQ 201
             ++
Sbjct:   254 DR 255

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

GO:0009793 "embryo development ending in seed dormancy" evidence=IMP

TAIR|locus:2056231 PP2-B10 "phloem protein 2-B10" [Arabidopsis thaliana (taxid:3702)]

 Score = 169 (64.5 bits), Expect = 9.2e-12, P = 9.2e-12
 Identities = 61/204 (29%), Positives = 92/204 (45%)

Query:    34 PADNTKETKVCEAKEAEVKLPHMYEAIVK-DADSPIDKSSVDKLYDQLYYGV------FL 86
             P D      V +  E+ VK   ++E  +  D +S I  S V     +LY+ +      F 
Sbjct:    31 PRDACVAATVSKTFESTVKSDIIWEKFLPADYESLIPPSRVFSSKKELYFSLCNDPVLFD 90

Query:    87 NQKS-----KKSGCNSFMLFSRALLITWAEDNRFWIWTPVKESSDDIVDVAELVQVCWLE 141
             + K      K SG    ML +  L I W ++ ++W W P+ ES  +   VA+L  VCW E
Sbjct:    91 DDKKSVWLEKASGKRCLMLSAMNLSIIWGDNPQYWQWIPIPESRFE--KVAKLRDVCWFE 148

Query:   142 IHARLDTTKLSPGISYEVLFVIMLKDPAYGWE-VPV-----------SLRLLLPNGTKQE 189
             I  R +T  LSP   Y    V    D  YG++ V +           S RL+  +   + 
Sbjct:   149 IRGRTNTRVLSPRTRYSAYIVFKGVDKCYGFQNVAIEAAVGVVGQEPSRRLICFSEAIRR 208

Query:   190 HKENLIVKPRNQ---WIEIPVGEF 210
              + N +VKP+ +   W+EI +GEF
Sbjct:   209 GRRN-VVKPKQREDGWMEIELGEF 231

GO:0005634 "nucleus" evidence=ISM

GO:0030246 "carbohydrate binding" evidence=ISS

TAIR|locus:2153954 PP2-B12 "phloem protein 2-B12" [Arabidopsis thaliana (taxid:3702)]

 Score = 164 (62.8 bits), Expect = 3.9e-11, P = 3.9e-11
 Identities = 47/163 (28%), Positives = 78/163 (47%)

Query:    91 KKSGCNSFMLFSRALLITWAEDNRFWIWTPVKESSDDIVDVAELVQVCWLEIHARLDTTK 150
             K+SG   +ML +R L I W +   FWIW  + +S  +  +VA L+ VCW EI  ++ T+ 
Sbjct:    89 KRSGKKCWMLSARKLDIVWVDSPEFWIWVSIPDSRFE--EVAGLLMVCWFEIRGKISTSL 146

Query:   151 LSPGISYEVLFVIMLKDP-AYGWE-VPV-----SLRLLLPNGTKQEHKENLIVKPRNQWI 203
             LS   +Y    V   ++  ++G+E +P+     S R  + N  +   K        + W+
Sbjct:   147 LSKATNYSAYLVFKEQEMGSFGFESLPLEVSFRSTRTEVYNNRRVFLKSGTQESREDGWL 206

Query:   204 EIPVGEFKSTPENAGEMEISMYEYEXXXXXXXXXXXXXIIRPK 246
             EI +GE+    ++  E+E+S+ E                IRPK
Sbjct:   207 EIELGEYYVGFDDE-EIEMSVLETREGGWKGGIIVQGIEIRPK 248

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0030246 "carbohydrate binding" evidence=ISS

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
O81865	P2A01_ARATH	No assigned EC number	0.4485	0.9203	0.9390	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: gw1.200.66.1 SubName- Full=Putative uncharacterized protein; (230 aa) (Populus trichocarpa)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	251
pfam14299	154	pfam14299, PP2, Phloem protein 2	4e-63

>gnl|CDD|222661 pfam14299, PP2, Phloem protein 2

 Score =  193 bits (494), Expect = 4e-63
 Identities = 70/156 (44%), Positives = 95/156 (60%), Gaps = 5/156 (3%)

Query: 94  GCNSFMLFSRALLITWAEDNRFWIWTPVKESSDDIVDVAELVQVCWLEIHARLDTTKLSP 153
           G   +ML +RAL ITW +D R+W W P+ ES     +VAEL+ VCWLEI  +++T  LSP
Sbjct: 1   GKKCYMLSARALSITWGDDPRYWRWIPLPESR--FSEVAELLDVCWLEIRGKINTRMLSP 58

Query: 154 GISYEVLFVIMLKDPAYGWE-VPVSLRLLLPNGTKQEHKENLIV--KPRNQWIEIPVGEF 210
           G +Y    V  L D AYGW+  PV   + +P+G K   +  + +  K  + W+EI VGEF
Sbjct: 59  GTTYSAYLVFKLADRAYGWDEKPVEFSVSVPDGQKSRQERYVCLPEKRGDGWMEIEVGEF 118

Query: 211 KSTPENAGEMEISMYEYEGGKWKKGLVVKGVIIRPK 246
            +     GE+E SM E +GG WK GL+V G+ IRPK
Sbjct: 119 FNEGGEDGEVEFSMREVDGGHWKGGLIVDGIEIRPK 154

Phloem protein 2 (PP2) is one of the most abundant and enigmatic proteins in the phloem sap. PP2 is translocated in the assimilate stream where its lectin activity or RNA-binding properties can exert effects over long distances. Length = 154

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	251
PF14299	154	PP2: Phloem protein 2	100.0
PF02018	131	CBM_4_9: Carbohydrate binding domain; InterPro: IP	88.55

>PF14299 PP2: Phloem protein 2

Probab=100.00  E-value=2.3e-65  Score=430.01  Aligned_cols=151  Identities=50%  Similarity=0.980  Sum_probs=145.1

Q ss_pred             CCeEEEEecccceeeecCCCCceeeeccCCCCcccccceEEeeeeEEEEEEEEecCcCCCCceEEEEEEEEEeCCCCCce
Q 025559           94 GCNSFMLFSRALLITWAEDNRFWIWTPVKESSDDIVDVAELVQVCWLEIHARLDTTKLSPGISYEVLFVIMLKDPAYGWE  173 (251)
Q Consensus        94 GkkCymLsAR~L~ItWgdd~~YW~Wi~~~~S~~rF~EVAeL~~VcWLEI~Gki~t~~LSP~T~Y~ay~v~kl~~~~~Gw~  173 (251)
                      |++|||||||+|+|+||||++||+|+++++|  ||.|||||++||||||+|+|++++|||+|+|+||||||+++++|||+
T Consensus         1 G~~cymlsaR~L~I~Wg~~~~yW~w~~~~~s--rf~evAeL~~V~WLeI~G~i~~~~Lsp~t~Y~vy~v~kl~~~~~Gw~   78 (154)
T PF14299_consen    1 GKKCYMLSARALSITWGDDPRYWKWIPLPDS--RFSEVAELLQVCWLEIRGKINTRMLSPGTTYAVYFVFKLKDDAYGWD   78 (154)
T ss_pred             CCEEEEEEhhhCEEecCCCCcceeeccCCcc--cceeeeEEEEEEEEEEEEEEEceEcCCCCEEEEEEEEEecCCCCCCC
Confidence            8999999999999999999999999999988  69999999999999999999999999999999999999999999999


Q ss_pred             e-ceEEEEEecCCee--eeeEEeeccCCCCCeEEEeeeeEEcCCCCCeEEEEEEEEEeCCeeeeeEEEEEEEEEec
Q 025559          174 V-PVSLRLLLPNGTK--QEHKENLIVKPRNQWIEIPVGEFKSTPENAGEMEISMYEYEGGKWKKGLVVKGVIIRPK  246 (251)
Q Consensus       174 ~-Pv~~~v~~~~g~~--~~~~~~l~~~~~dgW~EielGeF~~~~~~~~eV~fs~~E~~~~~wK~GLiV~GIeIRPk  246 (251)
                      . ||+++|+++++..  +.+.++++..+.||||||++|||+++++++++|+|+|+|+++++||+||||+|||||||
T Consensus        79 ~~pv~~~v~~~~~~~~~~~~~~~~~~~r~dgW~Eie~GeF~~~~~~~~ev~f~~~E~~~~~wK~GLiv~GieIRPK  154 (154)
T PF14299_consen   79 SPPVEFSVKVPDGEKYEQERKVCLPKERGDGWMEIELGEFFNEGGDDGEVEFSMYEVDSGHWKGGLIVEGIEIRPK  154 (154)
T ss_pred             cCCEEEEEEeCCCccccceeeEEcCCCCCCCEEEEEcceEEecCCCCcEEEEEEEEecCCcccCeEEEEEEEEecC
Confidence            6 9999999998876  56778888889999999999999999889999999999999999999999999999998

>PF02018 CBM_4_9: Carbohydrate binding domain; InterPro: IPR003305 The 1,4-beta-glucanase CenC from Cellulomonas fimi contains two cellulose-binding domains, CBD(N1) and CBD(N2), arranged in tandem at its N terminus

Probab=88.55  E-value=4.9  Score=30.83  Aligned_cols=67  Identities=21%  Similarity=0.350  Sum_probs=43.9

Q ss_pred             CCCCceEEEEEEEEEeCCCCCceeceEEEEEecCCe-eeeeEEeeccCCCCCeEEEeeeeEEcCCCCCeEEEEEEE
Q 025559          151 LSPGISYEVLFVIMLKDPAYGWEVPVSLRLLLPNGT-KQEHKENLIVKPRNQWIEIPVGEFKSTPENAGEMEISMY  225 (251)
Q Consensus       151 LSP~T~Y~ay~v~kl~~~~~Gw~~Pv~~~v~~~~g~-~~~~~~~l~~~~~dgW~EielGeF~~~~~~~~eV~fs~~  225 (251)
                      |-||.+|.+.|-++....     .++.+.+...++. ...-... .....+.|.+++ ++|... .+...+.|.+.
T Consensus        58 l~~G~~Y~~s~~vk~~~~-----~~~~~~~~~~~~~~~~~~~~~-~~~~~~~W~~~s-~~ft~~-~~~~~~~l~~~  125 (131)
T PF02018_consen   58 LKPGKTYTVSFWVKADSG-----GTVSVSLRDEDGSPYNWYTGQ-TVTITGEWTKYS-GTFTAP-SDDDTVRLYFE  125 (131)
T ss_dssp             E-TTSEEEEEEEEEESSS-----EEEEEEEEESSTTTEEEEEEE-EEEETSSEEEEE-EEEEEE-SSCEEEEEEEE
T ss_pred             ecCCCEEEEEEEEEeCCC-----CEEEEEEEEcCCCCcEEEEEE-EEECCCCcEEEE-EEEEEC-CCCceEEEEEE
Confidence            569999999999999874     6777777776662 1111110 112358999998 589877 44556666553

These homologous CBDs are distinct in their selectivity for binding amorphous and not crystalline cellulose []. Multidimensional heteronuclear nuclear magnetic resonance (NMR) spectroscopy was used to determine the tertiary structure of the 152 amino acid N-terminal cellulose-binding domain from C. fimi 1,4-beta-glucanase CenC (CBDN1) []. The tertiary structure of CBDN1 is strikingly similar to that of the bacterial 1,3-1,4-beta-glucanases, as well as other sugar-binding proteins with jelly-roll folds.; GO: 0016798 hydrolase activity, acting on glycosyl bonds; PDB: 3OEA_B 2ZEX_B 3OEB_A 2ZEY_A 2ZEW_A 1GUI_A 2W5F_A 2WZE_A 2WYS_A 2ZEZ_B ....

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	251
1dyo_A	160	Endo-1,4-beta-xylanase Y; carbohydrate-binding mod	92.36

>1dyo_A Endo-1,4-beta-xylanase Y; carbohydrate-binding module, xylan-binding; 2.1A {Clostridium thermocellum} SCOP: b.18.1.7 PDB: 1h6y_A 1h6x_A

Probab=92.36  E-value=3.7  Score=33.07  Aligned_cols=95  Identities=15%  Similarity=0.238  Sum_probs=57.7

Q ss_pred             CcCCCCceEEEEEEEEEeCCCCCceeceEEEEEe--cCCeeeeeEEeeccCCCCCeEEEeeeeEEcCCCCCeEEEEEEEE
Q 025559          149 TKLSPGISYEVLFVIMLKDPAYGWEVPVSLRLLL--PNGTKQEHKENLIVKPRNQWIEIPVGEFKSTPENAGEMEISMYE  226 (251)
Q Consensus       149 ~~LSP~T~Y~ay~v~kl~~~~~Gw~~Pv~~~v~~--~~g~~~~~~~~l~~~~~dgW~EielGeF~~~~~~~~eV~fs~~E  226 (251)
                      ..|.||++|.+..-+++.+..-  ...+.+.+..  .+|..+...+.-.....++|.+++-|.|...... ..+.|-+ |
T Consensus        63 ~~l~~g~~Y~~Sa~V~~~~g~~--~~~v~~~l~~~~~~g~~~y~~i~~~~~~~~~W~~L~G~~ft~~~~~-~~~~lyv-e  138 (160)
T 1dyo_A           63 RTFVPGNTYCFSVVASFIEGAS--STTFCMKLQYVDGSGTQRYDTIDMKTVGPNQWVHLYNPQYRIPSDA-TDMYVYV-E  138 (160)
T ss_dssp             TTSCTTCEEEEEEEEECCSSSS--CEEEEEEEEEECTTSCEEEEEEEEEEECSSCCEEEEEEEEECCTTC-EEEEEEE-E
T ss_pred             hhccCCCEEEEEEEEEECCCCC--ceeEEEEEEEEcCCCCEEEEEEeeEEEcCCccEEEECcEEEeCCCC-CEEEEEE-E
Confidence            3688999999999999876431  1234444443  3454332222111235789999987799986432 2333222 3


Q ss_pred             EeCCeeeeeEEEEEEEEEecCCC
Q 025559          227 YEGGKWKKGLVVKGVIIRPKNQA  249 (251)
Q Consensus       227 ~~~~~wK~GLiV~GIeIRPk~~~  249 (251)
                        +..-..=+.|+.|.|.|....
T Consensus       139 --~~~~~~d~yiDdv~i~~~g~~  159 (160)
T 1dyo_A          139 --TADDTINFYIDEAIGAVAGTV  159 (160)
T ss_dssp             --ESSCCCCEEEEEEEEEETTCC
T ss_pred             --CCCCCccEEEEEEEEEeCccc
Confidence              233445589999999987543

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	251
d1h6ya_	157	Xylan-binding domain {Clostridium thermocellum [Ta	95.67
d2ovrb1	102	F-box/WD repeat-containing protein 7, FBXW7 {Human	88.52
d1fs1a1	41	Skp2 {Human (Homo sapiens) [TaxId: 9606]}	88.04

>d1h6ya_ b.18.1.7 (A:) Xylan-binding domain {Clostridium thermocellum [TaxId: 1515]}

class: All beta proteins
fold: Galactose-binding domain-like
superfamily: Galactose-binding domain-like
family: CBM22
domain: Xylan-binding domain
species: Clostridium thermocellum [TaxId: 1515]

Probab=95.67  E-value=0.23  Score=36.58  Aligned_cols=104  Identities=14%  Similarity=0.202  Sum_probs=59.6

Q ss_pred             EEEEEecCcCCCCceEEEEEEEEEeCCCCCceeceEEEEEecCCeeeeeEEeeccCCCCCeEEEeeeeEEcCCCCCeEEE
Q 025559          142 IHARLDTTKLSPGISYEVLFVIMLKDPAYGWEVPVSLRLLLPNGTKQEHKENLIVKPRNQWIEIPVGEFKSTPENAGEME  221 (251)
Q Consensus       142 I~Gki~t~~LSP~T~Y~ay~v~kl~~~~~Gw~~Pv~~~v~~~~g~~~~~~~~l~~~~~dgW~EielGeF~~~~~~~~eV~  221 (251)
                      +.-.+....|.||++|.+.+-+|+.+...+-..-+.+...-.++..............++|.++..+.|....+ ...+.
T Consensus        53 ~~~~~~~~~l~~g~tY~~s~~vk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~~~~~~-~~~~~  131 (157)
T d1h6ya_          53 AQRALNPRTFVPGNTYCFSVVASFIEGASSTTFCMKLQYVDGSGTQRYDTIDMKTVGPNQWVHLYNPQYRIPSD-ATDMY  131 (157)
T ss_dssp             EEEECCTTTSCTTCEEEEEEEEECCSSSSCEEEEEEEEEECTTSCEEEEEEEEEEECTTCCEEEEEEEEECCTT-CEEEE
T ss_pred             eeEEecceeccCCCEEEEEEEEEeCCCCcceeEEEEEEEecCCCceeEEEeeEEEeccCccEEEEEEEEECCCC-CcEEE
Confidence            33344445689999999999999876544433323332222233222111111122457899998888876543 33444


Q ss_pred             EEEEEEeCCeeeeeEEEEEEEEEecCCC
Q 025559          222 ISMYEYEGGKWKKGLVVKGVIIRPKNQA  249 (251)
Q Consensus       222 fs~~E~~~~~wK~GLiV~GIeIRPk~~~  249 (251)
                      |-+ +  +..-..=+.|+-+.+.|+...
T Consensus       132 l~~-~--~~~~~~~~yiDDv~~~~~~~~  156 (157)
T d1h6ya_         132 VYV-A--TADDTINFYIDEAIGAVAGTV  156 (157)
T ss_dssp             EEE-E--ESSCCCCEEEEEEEEEETTCC
T ss_pred             EEE-E--CCCCCceEEEeeEEEeccccc
Confidence            432 2  222223389999999998653

>d2ovrb1 a.158.1.1 (B:2263-2364) F-box/WD repeat-containing protein 7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: F-box domain
superfamily: F-box domain
family: F-box domain
domain: F-box/WD repeat-containing protein 7, FBXW7
species: Human (Homo sapiens) [TaxId: 9606]

Probab=88.52  E-value=0.21  Score=35.07  Aligned_cols=31  Identities=10%  Similarity=0.080  Sum_probs=27.9

Q ss_pred             CchhhhhhhhhcCchhhhhhhhcchhhhhcC
Q 025559           21 SQNESQNFAIAAKPADNTKETKVCEAKEAEV   51 (251)
Q Consensus        21 ~~~~~~~~~~~~~P~d~cr~a~~~~a~~~~~   51 (251)
                      .......|.++++|.|.|+++.||+.++..+
T Consensus        23 P~Eil~~Ils~Ld~~dL~~~~~vcr~w~~l~   53 (102)
T d2ovrb1          23 PKELALYVLSFLEPKDLLQAAQTCRYWRILA   53 (102)
T ss_dssp             CHHHHHHHHTTSCHHHHHHHTTSCHHHHHHH
T ss_pred             CHHHHHHHHHcCCHHHHHHHHHHHHHHHHHH
Confidence            3567889999999999999999999999873

>d1fs1a1 a.158.1.1 (A:109-149) Skp2 {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: F-box domain
superfamily: F-box domain
family: F-box domain
domain: Skp2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=88.04  E-value=0.13  Score=31.29  Aligned_cols=30  Identities=10%  Similarity=-0.073  Sum_probs=26.2

Q ss_pred             chhhhhhhhhcCchhhhhhhhcchhhhhcC
Q 025559           22 QNESQNFAIAAKPADNTKETKVCEAKEAEV   51 (251)
Q Consensus        22 ~~~~~~~~~~~~P~d~cr~a~~~~a~~~~~   51 (251)
                      .....+|-++++|.|.|+++.||+.++...
T Consensus         6 ~eil~~If~~L~~~dl~~~~~Vcr~w~~l~   35 (41)
T d1fs1a1           6 DELLLGIFSCLCLPELLKVSGVCKRWYRLA   35 (41)
T ss_dssp             HHHHHHHHTTSCGGGHHHHHTTCHHHHHHH
T ss_pred             HHHHHHHHHcCCHHHHHHHHHHHHHHHHHh
Confidence            456789999999999999999999998653